Query 027277
Match_columns 225
No_of_seqs 207 out of 1297
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:13:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbh_A O-acetyl serine sulfhyd 100.0 5.6E-48 1.9E-52 328.0 22.1 224 1-224 102-325 (334)
2 4aec_A Cysteine synthase, mito 100.0 1.6E-47 5.5E-52 332.7 21.3 224 1-224 205-428 (430)
3 3vc3_A Beta-cyanoalnine syntha 100.0 3E-47 1E-51 324.5 21.0 224 1-224 117-340 (344)
4 1z7w_A Cysteine synthase; tran 100.0 1.2E-45 4E-50 312.5 22.5 224 1-224 97-320 (322)
5 2q3b_A Cysteine synthase A; py 100.0 8.5E-45 2.9E-49 306.1 21.8 215 1-215 97-311 (313)
6 1y7l_A O-acetylserine sulfhydr 100.0 1.3E-44 4.5E-49 305.3 19.0 216 1-216 92-315 (316)
7 2v03_A Cysteine synthase B; py 100.0 1.1E-43 3.9E-48 298.0 21.5 211 1-222 91-301 (303)
8 2pqm_A Cysteine synthase; OASS 100.0 6.2E-44 2.1E-48 304.2 18.9 220 1-222 108-328 (343)
9 2egu_A Cysteine synthase; O-ac 100.0 9.3E-44 3.2E-48 299.1 16.8 210 1-212 95-304 (308)
10 1ve1_A O-acetylserine sulfhydr 100.0 3.2E-43 1.1E-47 295.4 19.5 212 1-214 92-303 (304)
11 3dwg_A Cysteine synthase B; su 100.0 9.2E-44 3.1E-48 301.1 16.3 208 1-216 103-312 (325)
12 1o58_A O-acetylserine sulfhydr 100.0 5.3E-43 1.8E-47 293.9 18.5 207 1-209 95-302 (303)
13 1jbq_A B, cystathionine beta-s 100.0 9.2E-42 3.1E-46 297.8 24.6 220 1-222 191-418 (435)
14 3pc3_A CG1753, isoform A; CBS, 100.0 4.4E-41 1.5E-45 301.4 22.8 221 1-223 143-371 (527)
15 3l6b_A Serine racemase; pyrido 100.0 8.8E-40 3E-44 278.8 16.2 203 1-209 106-321 (346)
16 2gn0_A Threonine dehydratase c 100.0 8.4E-40 2.9E-44 278.7 13.5 203 1-209 118-332 (342)
17 1tdj_A Biosynthetic threonine 100.0 2.4E-38 8.3E-43 280.0 20.2 203 1-209 109-323 (514)
18 4h27_A L-serine dehydratase/L- 100.0 4.5E-38 1.5E-42 269.9 21.0 205 1-209 123-348 (364)
19 1ve5_A Threonine deaminase; ri 100.0 7.3E-39 2.5E-43 269.6 15.3 200 1-208 95-310 (311)
20 3iau_A Threonine deaminase; py 100.0 1.5E-38 5.1E-43 273.2 16.9 203 1-209 138-352 (366)
21 1v71_A Serine racemase, hypoth 100.0 1.6E-38 5.3E-43 268.9 16.5 201 1-209 104-316 (323)
22 1p5j_A L-serine dehydratase; l 100.0 6.6E-38 2.3E-42 269.5 20.3 216 1-222 123-358 (372)
23 2rkb_A Serine dehydratase-like 100.0 2.7E-37 9.4E-42 260.8 20.5 205 1-209 84-308 (318)
24 2zsj_A Threonine synthase; PLP 100.0 1E-37 3.5E-42 266.8 17.2 205 1-210 109-329 (352)
25 2d1f_A Threonine synthase; ami 100.0 1.1E-37 3.6E-42 267.4 16.4 206 1-210 115-336 (360)
26 3aey_A Threonine synthase; PLP 100.0 1.2E-37 4E-42 266.4 16.5 205 1-210 107-327 (351)
27 1j0a_A 1-aminocyclopropane-1-c 100.0 3.6E-38 1.2E-42 266.9 12.4 205 1-209 102-316 (325)
28 4d9i_A Diaminopropionate ammon 100.0 3.2E-37 1.1E-41 267.6 16.3 210 1-216 142-389 (398)
29 1f2d_A 1-aminocyclopropane-1-c 100.0 8.8E-38 3E-42 266.2 12.4 207 1-209 99-331 (341)
30 1wkv_A Cysteine synthase; homo 100.0 1.6E-36 5.4E-41 261.6 17.2 199 1-210 175-378 (389)
31 3ss7_X D-serine dehydratase; t 100.0 9.3E-37 3.2E-41 267.5 15.7 211 1-216 190-438 (442)
32 4d9b_A D-cysteine desulfhydras 100.0 6.3E-37 2.2E-41 260.9 13.6 206 1-209 113-337 (342)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 4.8E-36 1.6E-40 255.1 11.0 206 1-209 99-330 (338)
34 1e5x_A Threonine synthase; thr 100.0 2.4E-33 8.2E-38 248.3 14.3 203 1-210 214-442 (486)
35 1x1q_A Tryptophan synthase bet 100.0 4.3E-33 1.5E-37 242.9 14.7 201 8-209 166-409 (418)
36 1v8z_A Tryptophan synthase bet 100.0 4.6E-32 1.6E-36 234.6 15.1 201 7-209 138-380 (388)
37 1qop_B Tryptophan synthase bet 100.0 2.4E-32 8.1E-37 236.9 12.6 201 8-209 143-385 (396)
38 2o2e_A Tryptophan synthase bet 100.0 3.6E-31 1.2E-35 230.8 14.6 202 7-210 169-412 (422)
39 1vb3_A Threonine synthase; PLP 100.0 2.6E-29 8.8E-34 219.6 14.5 198 1-210 157-386 (428)
40 4f4f_A Threonine synthase; str 99.9 3.6E-25 1.2E-29 194.2 12.5 197 1-209 169-423 (468)
41 1kl7_A Threonine synthase; thr 99.9 8.7E-25 3E-29 193.9 13.7 204 1-210 184-459 (514)
42 3v7n_A Threonine synthase; ssg 99.9 5.6E-23 1.9E-27 180.6 11.9 198 1-209 182-442 (487)
43 4g81_D Putative hexonate dehyd 78.2 21 0.00073 28.1 10.0 72 10-87 26-97 (255)
44 3l6u_A ABC-type sugar transpor 77.7 14 0.00047 28.8 8.9 42 66-110 186-228 (293)
45 3ksm_A ABC-type sugar transpor 77.2 19 0.00066 27.6 9.6 42 66-110 178-221 (276)
46 4fn4_A Short chain dehydrogena 73.9 26 0.00088 27.6 9.4 71 10-86 24-94 (254)
47 3m6y_A 4-hydroxy-2-oxoglutarat 73.2 30 0.001 27.3 9.1 145 28-185 71-231 (275)
48 2ioy_A Periplasmic sugar-bindi 69.3 29 0.001 26.9 8.9 42 66-110 174-216 (283)
49 3l49_A ABC sugar (ribose) tran 69.2 37 0.0013 26.2 10.2 43 65-110 178-224 (291)
50 3qiv_A Short-chain dehydrogena 68.4 35 0.0012 26.0 9.1 71 10-86 26-96 (253)
51 3gxh_A Putative phosphatase (D 68.0 30 0.001 24.7 9.3 77 7-86 30-107 (157)
52 3gaf_A 7-alpha-hydroxysteroid 67.5 39 0.0013 26.1 9.2 72 10-87 29-100 (256)
53 3ucx_A Short chain dehydrogena 66.8 42 0.0015 25.9 9.7 71 10-86 28-98 (264)
54 3o74_A Fructose transport syst 66.6 29 0.00099 26.5 8.3 43 66-110 170-215 (272)
55 1gud_A ALBP, D-allose-binding 66.4 36 0.0012 26.5 8.9 48 59-110 178-227 (288)
56 3gyb_A Transcriptional regulat 66.4 42 0.0014 25.8 10.0 94 13-110 113-212 (280)
57 3rkr_A Short chain oxidoreduct 64.4 46 0.0016 25.7 9.1 71 10-86 46-116 (262)
58 3ged_A Short-chain dehydrogena 64.1 32 0.0011 26.9 8.0 68 10-87 19-86 (247)
59 3v8b_A Putative dehydrogenase, 63.5 45 0.0016 26.2 9.0 72 10-87 45-116 (283)
60 4ibo_A Gluconate dehydrogenase 62.9 52 0.0018 25.6 10.2 72 10-87 43-114 (271)
61 3gv0_A Transcriptional regulat 62.7 52 0.0018 25.5 9.7 35 75-111 187-225 (288)
62 4da9_A Short-chain dehydrogena 62.6 54 0.0018 25.7 9.8 73 10-87 46-118 (280)
63 3grk_A Enoyl-(acyl-carrier-pro 61.6 48 0.0017 26.2 8.8 72 9-87 49-120 (293)
64 3r1i_A Short-chain type dehydr 61.6 48 0.0016 26.0 8.7 72 10-87 49-120 (276)
65 3sju_A Keto reductase; short-c 61.4 56 0.0019 25.5 9.4 72 10-87 41-112 (279)
66 4fc7_A Peroxisomal 2,4-dienoyl 61.3 36 0.0012 26.6 7.9 72 10-86 44-115 (277)
67 3o38_A Short chain dehydrogena 61.2 49 0.0017 25.4 8.7 74 9-87 39-112 (266)
68 3imf_A Short chain dehydrogena 61.0 47 0.0016 25.6 8.5 71 10-86 23-93 (257)
69 3tox_A Short chain dehydrogena 60.9 58 0.002 25.5 9.6 72 10-87 25-96 (280)
70 3tfo_A Putative 3-oxoacyl-(acy 60.7 57 0.002 25.4 9.1 72 10-87 21-92 (264)
71 2fn9_A Ribose ABC transporter, 60.6 33 0.0011 26.6 7.6 42 66-110 182-224 (290)
72 3o26_A Salutaridine reductase; 60.5 50 0.0017 25.8 8.8 74 10-87 29-102 (311)
73 3fwz_A Inner membrane protein 60.3 39 0.0013 23.3 8.9 82 10-110 23-105 (140)
74 3gdg_A Probable NADP-dependent 59.7 48 0.0016 25.5 8.4 75 9-87 38-112 (267)
75 3m0z_A Putative aldolase; MCSG 59.5 61 0.0021 25.3 10.0 137 28-178 49-198 (249)
76 2dri_A D-ribose-binding protei 59.2 44 0.0015 25.7 8.1 41 67-110 174-215 (271)
77 4dry_A 3-oxoacyl-[acyl-carrier 58.5 58 0.002 25.5 8.8 72 10-87 50-122 (281)
78 3tjr_A Short chain dehydrogena 58.1 68 0.0023 25.4 9.7 72 10-87 48-119 (301)
79 3nrc_A Enoyl-[acyl-carrier-pro 57.3 45 0.0015 26.1 7.9 70 10-87 45-114 (280)
80 3r3s_A Oxidoreductase; structu 57.1 70 0.0024 25.2 9.6 74 10-87 66-139 (294)
81 3hcw_A Maltose operon transcri 57.0 57 0.002 25.4 8.5 43 66-110 180-228 (295)
82 3ek2_A Enoyl-(acyl-carrier-pro 56.9 37 0.0013 26.1 7.3 72 9-87 32-103 (271)
83 4dmm_A 3-oxoacyl-[acyl-carrier 56.8 67 0.0023 24.9 9.7 73 10-87 45-117 (269)
84 4gkb_A 3-oxoacyl-[acyl-carrier 56.5 48 0.0016 26.0 7.8 70 10-86 24-93 (258)
85 3k31_A Enoyl-(acyl-carrier-pro 56.5 43 0.0015 26.5 7.7 72 9-87 48-119 (296)
86 3osu_A 3-oxoacyl-[acyl-carrier 56.4 64 0.0022 24.5 9.6 73 10-87 21-93 (246)
87 3lyl_A 3-oxoacyl-(acyl-carrier 56.3 63 0.0022 24.4 9.5 72 10-87 22-93 (247)
88 3brs_A Periplasmic binding pro 56.0 67 0.0023 24.7 9.5 48 60-111 176-225 (289)
89 3pk0_A Short-chain dehydrogena 55.8 68 0.0023 24.7 9.3 72 10-87 27-99 (262)
90 3ijr_A Oxidoreductase, short c 55.8 64 0.0022 25.4 8.6 73 10-87 64-136 (291)
91 4fs3_A Enoyl-[acyl-carrier-pro 55.7 54 0.0018 25.4 8.0 73 8-87 23-97 (256)
92 3rot_A ABC sugar transporter, 55.3 57 0.002 25.3 8.3 42 66-110 179-225 (297)
93 3l77_A Short-chain alcohol deh 55.1 35 0.0012 25.7 6.7 73 10-87 19-91 (235)
94 3ksu_A 3-oxoacyl-acyl carrier 55.1 47 0.0016 25.7 7.6 73 10-86 28-101 (262)
95 3lf2_A Short chain oxidoreduct 55.0 57 0.0019 25.2 8.1 73 10-87 25-98 (265)
96 3v2g_A 3-oxoacyl-[acyl-carrier 54.7 74 0.0025 24.8 9.7 73 10-87 48-120 (271)
97 3oid_A Enoyl-[acyl-carrier-pro 54.6 71 0.0024 24.6 9.9 72 10-87 21-93 (258)
98 3ftp_A 3-oxoacyl-[acyl-carrier 54.2 75 0.0026 24.7 9.4 72 10-87 45-116 (270)
99 3v2h_A D-beta-hydroxybutyrate 53.7 78 0.0027 24.7 9.9 74 10-87 42-115 (281)
100 4egf_A L-xylulose reductase; s 53.6 75 0.0026 24.5 9.4 72 10-87 37-109 (266)
101 3is3_A 17BETA-hydroxysteroid d 53.5 76 0.0026 24.5 9.3 73 10-87 35-107 (270)
102 4fgs_A Probable dehydrogenase 53.5 74 0.0025 25.2 8.5 69 10-87 46-114 (273)
103 1tjy_A Sugar transport protein 53.0 71 0.0024 25.2 8.5 42 66-110 180-222 (316)
104 1u11_A PURE (N5-carboxyaminoim 52.5 70 0.0024 23.9 7.6 98 6-114 10-110 (182)
105 3k9c_A Transcriptional regulat 52.3 54 0.0018 25.4 7.6 35 75-111 184-222 (289)
106 3h75_A Periplasmic sugar-bindi 52.2 74 0.0025 25.4 8.6 50 59-112 190-243 (350)
107 3gk3_A Acetoacetyl-COA reducta 51.5 81 0.0028 24.3 9.1 73 10-87 42-114 (269)
108 2h3h_A Sugar ABC transporter, 51.2 76 0.0026 24.8 8.4 41 67-110 174-216 (313)
109 3dbi_A Sugar-binding transcrip 50.7 85 0.0029 24.9 8.7 41 67-110 234-278 (338)
110 3h7a_A Short chain dehydrogena 50.5 75 0.0026 24.3 8.1 71 10-87 24-94 (252)
111 3sx2_A Putative 3-ketoacyl-(ac 50.5 85 0.0029 24.3 10.0 74 10-87 30-113 (278)
112 2bm8_A Cephalosporin hydroxyla 50.2 51 0.0017 25.2 7.0 38 78-115 84-121 (236)
113 3rih_A Short chain dehydrogena 50.0 77 0.0026 25.1 8.2 72 10-87 58-130 (293)
114 2rjo_A Twin-arginine transloca 49.5 38 0.0013 26.9 6.4 43 66-110 187-231 (332)
115 2x7x_A Sensor protein; transfe 49.2 87 0.003 24.7 8.5 44 67-113 180-225 (325)
116 3dii_A Short-chain dehydrogena 48.7 84 0.0029 23.9 8.0 68 10-87 19-86 (247)
117 3m9w_A D-xylose-binding peripl 48.3 42 0.0014 26.4 6.4 42 66-109 178-221 (313)
118 3ryc_A Tubulin alpha chain; al 47.6 71 0.0024 27.5 7.9 67 46-112 91-174 (451)
119 3uve_A Carveol dehydrogenase ( 47.5 97 0.0033 24.1 9.8 75 10-87 28-115 (286)
120 3t7c_A Carveol dehydrogenase; 47.5 1E+02 0.0035 24.3 10.0 74 10-87 45-128 (299)
121 3ryc_B Tubulin beta chain; alp 47.4 60 0.002 27.9 7.4 67 46-112 89-172 (445)
122 3qlj_A Short chain dehydrogena 46.8 1.1E+02 0.0037 24.4 9.1 74 10-87 44-125 (322)
123 4iin_A 3-ketoacyl-acyl carrier 46.7 98 0.0033 23.9 9.6 73 10-87 46-118 (271)
124 3a28_C L-2.3-butanediol dehydr 46.7 95 0.0032 23.7 8.4 71 11-87 20-92 (258)
125 2hqb_A Transcriptional activat 46.5 34 0.0011 27.1 5.5 34 76-113 181-214 (296)
126 3edm_A Short chain dehydrogena 46.4 97 0.0033 23.7 9.0 73 10-87 25-97 (259)
127 4iiu_A 3-oxoacyl-[acyl-carrier 46.1 99 0.0034 23.7 9.9 73 10-87 43-115 (267)
128 3tka_A Ribosomal RNA small sub 46.1 18 0.00063 30.0 3.8 52 60-114 40-93 (347)
129 3i1j_A Oxidoreductase, short c 46.0 93 0.0032 23.4 9.6 72 10-86 31-104 (247)
130 2btq_B Tubulin btubb; structur 46.0 63 0.0021 27.5 7.3 68 45-112 89-173 (426)
131 3kke_A LACI family transcripti 46.0 41 0.0014 26.4 5.9 34 75-110 196-233 (303)
132 4e3z_A Putative oxidoreductase 45.8 1E+02 0.0035 23.7 9.2 73 10-87 43-115 (272)
133 2fvy_A D-galactose-binding per 45.7 50 0.0017 25.7 6.4 43 66-110 192-236 (309)
134 3svt_A Short-chain type dehydr 45.6 1E+02 0.0036 23.8 8.9 72 10-86 28-101 (281)
135 1jx6_A LUXP protein; protein-l 45.4 1.1E+02 0.0038 24.1 9.1 48 59-110 219-267 (342)
136 8abp_A L-arabinose-binding pro 44.8 83 0.0028 24.3 7.6 43 67-110 187-232 (306)
137 3i4f_A 3-oxoacyl-[acyl-carrier 44.7 67 0.0023 24.6 7.0 71 10-85 24-94 (264)
138 3nyw_A Putative oxidoreductase 44.7 1E+02 0.0035 23.5 8.7 72 10-87 24-98 (250)
139 3u5t_A 3-oxoacyl-[acyl-carrier 44.5 1.1E+02 0.0037 23.7 8.7 72 11-87 45-116 (267)
140 3ip1_A Alcohol dehydrogenase, 44.4 1.3E+02 0.0046 24.8 9.3 85 9-109 229-317 (404)
141 3tsc_A Putative oxidoreductase 44.0 1.1E+02 0.0037 23.7 9.6 74 10-87 28-112 (277)
142 3s55_A Putative short-chain de 44.0 1.1E+02 0.0038 23.7 9.9 74 10-87 27-110 (281)
143 3pxx_A Carveol dehydrogenase; 43.8 1.1E+02 0.0038 23.6 9.9 74 10-87 27-110 (287)
144 2rgy_A Transcriptional regulat 43.2 57 0.002 25.3 6.4 42 67-111 181-226 (290)
145 2fqx_A Membrane lipoprotein TM 43.1 36 0.0012 27.3 5.3 45 65-114 180-227 (318)
146 3huu_A Transcription regulator 43.1 37 0.0013 26.6 5.3 34 75-110 201-238 (305)
147 3ezl_A Acetoacetyl-COA reducta 43.1 99 0.0034 23.4 7.7 73 10-87 30-102 (256)
148 3clk_A Transcription regulator 43.0 58 0.002 25.2 6.4 36 74-111 183-222 (290)
149 3awd_A GOX2181, putative polyo 42.8 1.1E+02 0.0037 23.2 9.6 72 10-87 30-101 (260)
150 3oig_A Enoyl-[acyl-carrier-pro 42.8 78 0.0027 24.2 7.1 72 9-87 25-98 (266)
151 3pgx_A Carveol dehydrogenase; 42.5 1.2E+02 0.004 23.5 9.7 75 10-87 32-116 (280)
152 2bto_A Tubulin btuba; bacteria 42.4 61 0.0021 28.1 6.7 66 47-112 94-176 (473)
153 1fmc_A 7 alpha-hydroxysteroid 42.4 1.1E+02 0.0037 23.1 9.3 72 10-87 28-99 (255)
154 1ae1_A Tropinone reductase-I; 42.3 1.2E+02 0.004 23.5 9.7 73 10-87 38-110 (273)
155 1zem_A Xylitol dehydrogenase; 42.2 1.1E+02 0.0039 23.3 9.3 72 10-87 24-95 (262)
156 3o1i_D Periplasmic protein TOR 42.2 1.2E+02 0.0039 23.4 8.4 84 19-109 138-226 (304)
157 3sc4_A Short chain dehydrogena 42.0 1.1E+02 0.0037 23.9 7.9 74 10-87 26-104 (285)
158 3g85_A Transcriptional regulat 41.9 96 0.0033 23.8 7.5 34 75-110 187-224 (289)
159 4ej6_A Putative zinc-binding d 41.9 45 0.0016 27.4 5.8 82 9-109 198-283 (370)
160 3s2e_A Zinc-containing alcohol 41.8 38 0.0013 27.4 5.2 82 8-109 181-262 (340)
161 2jah_A Clavulanic acid dehydro 41.7 1.1E+02 0.0039 23.1 9.6 72 10-87 24-95 (247)
162 2vk2_A YTFQ, ABC transporter p 41.5 1.2E+02 0.0042 23.5 9.0 44 66-111 179-228 (306)
163 3f1l_A Uncharacterized oxidore 41.3 1.2E+02 0.0039 23.1 8.6 72 10-86 29-102 (252)
164 2rhc_B Actinorhodin polyketide 41.2 1.2E+02 0.0042 23.4 9.6 72 10-87 39-110 (277)
165 2p91_A Enoyl-[acyl-carrier-pro 41.2 1.1E+02 0.0038 23.7 7.8 72 9-87 39-110 (285)
166 4grd_A N5-CAIR mutase, phospho 41.0 47 0.0016 24.6 5.0 81 21-112 17-99 (173)
167 3e03_A Short chain dehydrogena 40.6 1.2E+02 0.0043 23.3 8.2 74 10-87 23-101 (274)
168 3k4h_A Putative transcriptiona 40.1 48 0.0016 25.6 5.4 34 75-110 191-228 (292)
169 1geg_A Acetoin reductase; SDR 40.1 1.2E+02 0.0041 23.0 9.6 72 10-87 19-90 (256)
170 3cxt_A Dehydrogenase with diff 39.9 1.3E+02 0.0046 23.5 9.4 72 10-87 51-122 (291)
171 4gqb_A Protein arginine N-meth 39.8 30 0.001 31.3 4.4 36 79-114 361-396 (637)
172 1xkq_A Short-chain reductase f 39.6 1.3E+02 0.0044 23.2 9.0 72 10-87 23-97 (280)
173 1iy8_A Levodione reductase; ox 39.1 1.3E+02 0.0044 23.0 9.7 72 10-87 30-103 (267)
174 3egc_A Putative ribose operon 39.1 56 0.0019 25.2 5.7 42 66-110 177-222 (291)
175 3qk7_A Transcriptional regulat 38.7 53 0.0018 25.5 5.5 34 75-110 186-223 (294)
176 1qsg_A Enoyl-[acyl-carrier-pro 38.5 95 0.0032 23.8 6.9 72 9-87 27-98 (265)
177 2wyu_A Enoyl-[acyl carrier pro 38.5 1.2E+02 0.0041 23.1 7.6 72 9-87 26-97 (261)
178 1wma_A Carbonyl reductase [NAD 38.5 1.3E+02 0.0043 22.8 8.7 71 11-87 22-93 (276)
179 1yb1_A 17-beta-hydroxysteroid 38.4 1.3E+02 0.0046 23.0 9.7 72 10-87 48-119 (272)
180 2g76_A 3-PGDH, D-3-phosphoglyc 38.4 1.6E+02 0.0055 24.0 8.9 84 9-99 180-271 (335)
181 3ai3_A NADPH-sorbose reductase 38.2 1.3E+02 0.0045 22.9 9.6 72 10-87 24-96 (263)
182 2ae2_A Protein (tropinone redu 38.0 1.3E+02 0.0045 22.9 9.2 73 10-87 26-98 (260)
183 1xhl_A Short-chain dehydrogena 37.4 1.5E+02 0.0051 23.3 9.3 72 10-87 43-117 (297)
184 3afn_B Carbonyl reductase; alp 37.3 1.3E+02 0.0044 22.6 8.2 72 10-86 24-95 (258)
185 3brq_A HTH-type transcriptiona 37.2 54 0.0018 25.2 5.3 35 75-111 199-237 (296)
186 3l9w_A Glutathione-regulated p 37.2 1.9E+02 0.0063 24.3 9.5 83 10-111 20-103 (413)
187 4e5n_A Thermostable phosphite 36.9 1.5E+02 0.0052 24.0 8.1 83 10-99 161-252 (330)
188 2qv7_A Diacylglycerol kinase D 36.9 98 0.0033 25.0 7.0 37 76-114 80-116 (337)
189 2uvd_A 3-oxoacyl-(acyl-carrier 36.8 1.3E+02 0.0046 22.6 9.6 73 10-87 21-93 (246)
190 3uf0_A Short-chain dehydrogena 36.8 1.5E+02 0.005 23.0 8.5 70 10-87 48-117 (273)
191 3bbl_A Regulatory protein of L 36.7 1.2E+02 0.004 23.3 7.3 34 76-111 188-225 (287)
192 4b4k_A N5-carboxyaminoimidazol 36.7 51 0.0018 24.6 4.6 82 21-113 27-110 (181)
193 2fep_A Catabolite control prot 36.5 81 0.0028 24.3 6.3 35 75-111 194-232 (289)
194 1jye_A Lactose operon represso 36.5 74 0.0025 25.5 6.2 41 67-110 230-274 (349)
195 3g1w_A Sugar ABC transporter; 36.4 1.4E+02 0.0048 23.0 7.7 34 75-110 186-221 (305)
196 3kb6_A D-lactate dehydrogenase 36.3 1.7E+02 0.0059 23.7 9.8 97 8-114 155-259 (334)
197 2zat_A Dehydrogenase/reductase 36.2 1.4E+02 0.0048 22.7 9.6 72 10-87 31-102 (260)
198 1o4v_A Phosphoribosylaminoimid 35.3 63 0.0022 24.2 4.9 44 67-114 58-102 (183)
199 2q3b_A Cysteine synthase A; py 35.1 1.7E+02 0.0058 23.3 8.3 35 78-115 68-102 (313)
200 3rg8_A Phosphoribosylaminoimid 34.9 44 0.0015 24.4 3.9 83 21-114 7-92 (159)
201 1xq1_A Putative tropinone redu 34.9 1.5E+02 0.0051 22.5 9.9 73 10-87 31-103 (266)
202 2pd4_A Enoyl-[acyl-carrier-pro 34.8 1.4E+02 0.0047 23.0 7.4 72 9-87 24-95 (275)
203 2iks_A DNA-binding transcripti 34.8 60 0.002 25.1 5.2 34 75-110 196-233 (293)
204 3oec_A Carveol dehydrogenase ( 34.6 1.7E+02 0.0059 23.2 9.6 75 10-87 63-146 (317)
205 3h5t_A Transcriptional regulat 34.5 78 0.0027 25.5 6.1 34 75-110 267-304 (366)
206 3ioy_A Short-chain dehydrogena 34.2 1.8E+02 0.006 23.2 9.0 72 10-87 25-98 (319)
207 3gg9_A D-3-phosphoglycerate de 34.2 85 0.0029 25.9 6.2 84 9-99 175-267 (352)
208 1byk_A Protein (trehalose oper 34.1 80 0.0028 23.7 5.8 34 75-110 171-205 (255)
209 4e6p_A Probable sorbitol dehyd 34.0 1.5E+02 0.0053 22.5 9.1 68 10-86 25-92 (259)
210 3gbv_A Putative LACI-family tr 33.9 75 0.0026 24.5 5.7 40 67-110 192-232 (304)
211 1gee_A Glucose 1-dehydrogenase 33.7 1.5E+02 0.0052 22.3 9.1 73 10-87 24-96 (261)
212 2h0a_A TTHA0807, transcription 33.7 65 0.0022 24.5 5.2 34 75-110 179-216 (276)
213 3fbg_A Putative arginate lyase 33.6 1.5E+02 0.005 23.9 7.6 81 9-109 167-247 (346)
214 1wwk_A Phosphoglycerate dehydr 33.5 1.8E+02 0.0063 23.2 9.6 84 9-99 157-248 (307)
215 4f3n_A Uncharacterized ACR, CO 33.5 95 0.0033 26.5 6.4 46 68-114 131-177 (432)
216 4g2n_A D-isomer specific 2-hyd 33.4 1.3E+02 0.0045 24.7 7.2 94 9-111 188-289 (345)
217 4ei7_A Plasmid replication pro 33.3 66 0.0022 27.1 5.4 37 76-112 111-152 (389)
218 2xvc_A ESCRT-III, SSO0910; cel 32.9 23 0.00078 21.2 1.7 25 144-169 31-55 (59)
219 3zv4_A CIS-2,3-dihydrobiphenyl 32.8 1.3E+02 0.0043 23.4 6.8 67 10-86 22-89 (281)
220 4h27_A L-serine dehydratase/L- 32.8 1.9E+02 0.0064 23.7 8.1 36 77-115 93-128 (364)
221 3ors_A N5-carboxyaminoimidazol 32.6 76 0.0026 23.2 4.9 83 21-114 8-92 (163)
222 1qpz_A PURA, protein (purine n 32.5 1.8E+02 0.0063 22.9 8.8 35 75-111 237-275 (340)
223 3w01_A Heptaprenylglyceryl pho 32.4 1.8E+02 0.006 22.6 7.6 61 6-83 25-87 (235)
224 2qu7_A Putative transcriptiona 32.3 83 0.0028 24.2 5.7 40 66-110 180-223 (288)
225 3cs3_A Sugar-binding transcrip 32.3 85 0.0029 24.0 5.7 24 76-101 177-200 (277)
226 3efb_A Probable SOR-operon reg 32.1 78 0.0027 24.8 5.4 50 63-114 47-96 (266)
227 2o20_A Catabolite control prot 32.0 1.5E+02 0.005 23.4 7.2 33 76-110 239-275 (332)
228 3oow_A Phosphoribosylaminoimid 32.0 81 0.0028 23.2 5.0 85 19-114 7-94 (166)
229 3pp8_A Glyoxylate/hydroxypyruv 31.6 2E+02 0.007 23.1 9.3 97 9-114 154-258 (315)
230 2aot_A HMT, histamine N-methyl 31.3 46 0.0016 26.2 4.0 53 62-114 36-93 (292)
231 3rwb_A TPLDH, pyridoxal 4-dehy 31.1 1.7E+02 0.0058 22.1 9.9 69 10-87 23-91 (247)
232 1g0o_A Trihydroxynaphthalene r 31.0 1.8E+02 0.0062 22.4 9.7 72 10-87 46-118 (283)
233 2cfc_A 2-(R)-hydroxypropyl-COM 30.9 1.7E+02 0.0057 21.9 8.1 72 10-87 19-91 (250)
234 1mxh_A Pteridine reductase 2; 30.7 1.8E+02 0.0061 22.2 9.3 76 10-87 28-105 (276)
235 3dc7_A Putative uncharacterize 30.5 72 0.0025 23.7 4.9 48 67-114 73-140 (232)
236 3gvc_A Oxidoreductase, probabl 30.4 1.9E+02 0.0065 22.4 8.9 69 10-87 46-114 (277)
237 1w6u_A 2,4-dienoyl-COA reducta 30.4 1.9E+02 0.0065 22.4 9.6 71 10-86 43-114 (302)
238 2qq5_A DHRS1, dehydrogenase/re 30.4 1.8E+02 0.0061 22.1 9.4 72 10-86 22-93 (260)
239 3jvd_A Transcriptional regulat 30.4 2E+02 0.0069 22.7 8.4 47 59-110 217-267 (333)
240 1m6y_A S-adenosyl-methyltransf 30.4 85 0.0029 25.2 5.4 50 61-114 10-61 (301)
241 1yde_A Retinal dehydrogenase/r 30.1 1.9E+02 0.0064 22.2 8.3 68 10-87 26-93 (270)
242 3hs3_A Ribose operon repressor 30.1 1.7E+02 0.0058 22.2 7.2 43 65-110 168-214 (277)
243 4imr_A 3-oxoacyl-(acyl-carrier 30.1 1.9E+02 0.0065 22.3 8.0 70 10-86 50-119 (275)
244 3d8u_A PURR transcriptional re 30.1 67 0.0023 24.4 4.7 34 75-110 180-217 (275)
245 3fpc_A NADP-dependent alcohol 29.7 71 0.0024 25.9 5.0 82 9-109 182-265 (352)
246 3hm2_A Precorrin-6Y C5,15-meth 29.6 1.4E+02 0.0049 20.7 6.3 44 67-114 15-60 (178)
247 3e3m_A Transcriptional regulat 29.6 1.6E+02 0.0054 23.5 7.1 39 68-109 243-285 (355)
248 1zun_A Sulfate adenylyltransfe 29.5 42 0.0014 27.4 3.5 72 152-223 32-105 (325)
249 2oq2_A Phosphoadenosine phosph 29.3 44 0.0015 26.2 3.5 68 155-222 30-98 (261)
250 1xmp_A PURE, phosphoribosylami 29.2 62 0.0021 23.9 3.9 44 67-114 56-100 (170)
251 1vl8_A Gluconate 5-dehydrogena 29.2 1.9E+02 0.0066 22.1 9.7 72 10-87 38-110 (267)
252 2b4q_A Rhamnolipids biosynthes 29.1 2E+02 0.0068 22.2 9.8 71 10-87 46-116 (276)
253 3kuu_A Phosphoribosylaminoimid 29.0 79 0.0027 23.4 4.5 44 67-114 57-101 (174)
254 2whl_A Beta-mannanase, baman5; 29.0 1.9E+02 0.0066 22.5 7.4 104 7-111 34-158 (294)
255 3r4v_A Putative uncharacterize 29.0 45 0.0015 27.1 3.4 89 10-110 18-119 (315)
256 2q2v_A Beta-D-hydroxybutyrate 28.9 1.9E+02 0.0064 21.9 9.9 70 10-87 21-90 (255)
257 3kvo_A Hydroxysteroid dehydrog 28.9 2.2E+02 0.0075 23.1 7.8 74 10-87 62-140 (346)
258 1h5q_A NADP-dependent mannitol 28.7 1.5E+02 0.005 22.4 6.5 72 10-87 31-103 (265)
259 1vp8_A Hypothetical protein AF 28.6 1.8E+02 0.0063 21.9 6.5 56 46-110 18-73 (201)
260 3s40_A Diacylglycerol kinase; 28.5 1.7E+02 0.0059 23.2 7.0 70 10-91 32-104 (304)
261 1x1t_A D(-)-3-hydroxybutyrate 28.4 1.9E+02 0.0066 21.9 10.3 72 10-87 21-94 (260)
262 4hy3_A Phosphoglycerate oxidor 28.1 2.6E+02 0.0087 23.2 10.7 96 9-114 191-294 (365)
263 1yxm_A Pecra, peroxisomal tran 28.1 2.1E+02 0.0072 22.2 9.5 71 10-86 35-110 (303)
264 4eqs_A Coenzyme A disulfide re 28.0 70 0.0024 26.9 4.8 36 77-114 1-36 (437)
265 3uog_A Alcohol dehydrogenase; 27.9 1.3E+02 0.0046 24.3 6.4 81 9-109 205-286 (363)
266 3dxy_A TRNA (guanine-N(7)-)-me 27.9 53 0.0018 24.8 3.7 34 77-114 36-69 (218)
267 3gvx_A Glycerate dehydrogenase 27.9 82 0.0028 25.2 4.9 96 9-113 137-237 (290)
268 3utn_X Thiosulfate sulfurtrans 27.8 58 0.002 26.7 4.0 29 79-107 277-306 (327)
269 3h5o_A Transcriptional regulat 27.8 1.2E+02 0.0041 24.0 6.0 41 67-110 231-275 (339)
270 2c07_A 3-oxoacyl-(acyl-carrier 27.7 2.1E+02 0.0072 22.1 8.3 71 11-87 62-132 (285)
271 3tbh_A O-acetyl serine sulfhyd 26.7 2.5E+02 0.0086 22.6 8.7 36 78-115 72-107 (334)
272 1dbq_A Purine repressor; trans 26.7 1.2E+02 0.0043 23.0 5.8 35 75-111 186-224 (289)
273 3e05_A Precorrin-6Y C5,15-meth 26.6 1.4E+02 0.0047 21.7 5.7 43 68-114 31-75 (204)
274 2nwq_A Probable short-chain de 26.5 2E+02 0.007 22.1 7.0 72 9-87 37-108 (272)
275 3qwb_A Probable quinone oxidor 26.3 2.4E+02 0.0081 22.4 7.6 81 9-109 165-246 (334)
276 2gn0_A Threonine dehydratase c 26.2 2.4E+02 0.0081 22.8 7.6 36 77-115 88-123 (342)
277 3tb6_A Arabinose metabolism tr 26.2 72 0.0025 24.5 4.3 32 77-110 202-237 (298)
278 2yq5_A D-isomer specific 2-hyd 26.2 1.5E+02 0.005 24.4 6.2 97 9-114 163-265 (343)
279 3jy6_A Transcriptional regulat 25.9 68 0.0023 24.5 4.1 34 75-110 180-217 (276)
280 3kjx_A Transcriptional regulat 25.8 1.3E+02 0.0044 23.9 5.9 40 68-110 240-283 (344)
281 2gnp_A Transcriptional regulat 25.8 2.1E+02 0.0073 22.2 7.0 75 31-107 8-87 (266)
282 1zk4_A R-specific alcohol dehy 25.8 2.1E+02 0.0071 21.3 8.8 71 10-87 23-93 (251)
283 3icc_A Putative 3-oxoacyl-(acy 25.3 2.1E+02 0.0073 21.3 7.3 74 10-87 24-102 (255)
284 1e3j_A NADP(H)-dependent ketos 25.3 1.8E+02 0.0062 23.4 6.7 83 9-109 184-270 (352)
285 2ekl_A D-3-phosphoglycerate de 25.2 2.6E+02 0.009 22.3 9.8 84 9-99 157-248 (313)
286 1ej0_A FTSJ; methyltransferase 25.2 1.4E+02 0.0048 20.4 5.4 44 67-113 11-57 (180)
287 2bon_A Lipid kinase; DAG kinas 25.1 2.7E+02 0.0091 22.3 7.9 37 77-115 83-121 (332)
288 3c85_A Putative glutathione-re 24.9 1.6E+02 0.0055 20.9 5.8 42 68-109 95-138 (183)
289 4dyv_A Short-chain dehydrogena 24.9 2.4E+02 0.0082 21.7 9.0 69 10-87 45-113 (272)
290 3iup_A Putative NADPH:quinone 24.9 84 0.0029 25.9 4.6 74 9-98 188-262 (379)
291 2pi1_A D-lactate dehydrogenase 24.9 2.8E+02 0.0095 22.5 9.2 97 9-114 156-259 (334)
292 1p5j_A L-serine dehydratase; l 24.8 2.7E+02 0.0091 22.9 7.7 36 77-115 93-128 (372)
293 1spx_A Short-chain reductase f 24.7 2.3E+02 0.008 21.6 7.7 72 10-87 23-97 (278)
294 3n74_A 3-ketoacyl-(acyl-carrie 24.5 2.3E+02 0.0078 21.4 9.4 69 10-87 26-94 (261)
295 3tzq_B Short-chain type dehydr 24.2 2.4E+02 0.0083 21.6 8.1 69 10-87 28-96 (271)
296 2f6u_A GGGPS, (S)-3-O-geranylg 24.1 2.5E+02 0.0085 21.7 8.5 61 5-83 21-84 (234)
297 2rkb_A Serine dehydratase-like 24.1 2.7E+02 0.0092 22.1 8.0 36 77-115 54-89 (318)
298 2hsg_A Glucose-resistance amyl 24.1 1.5E+02 0.005 23.4 5.9 34 75-110 238-275 (332)
299 2nac_A NAD-dependent formate d 24.0 3.2E+02 0.011 22.8 8.5 84 9-99 206-299 (393)
300 3bzw_A Putative lipase; protei 23.9 2.4E+02 0.0083 21.5 8.5 22 90-111 147-168 (274)
301 3dwg_A Cysteine synthase B; su 23.7 2.8E+02 0.0097 22.2 8.5 35 78-115 74-108 (325)
302 4eso_A Putative oxidoreductase 23.7 2.4E+02 0.0082 21.4 7.8 69 10-87 25-93 (255)
303 3cb2_A Gamma-1-tubulin, tubuli 23.6 2.9E+02 0.01 23.8 7.8 58 54-112 100-174 (475)
304 3l6e_A Oxidoreductase, short-c 23.5 2.3E+02 0.008 21.1 8.9 69 10-87 20-88 (235)
305 1ja9_A 4HNR, 1,3,6,8-tetrahydr 23.2 2.4E+02 0.0083 21.2 8.8 73 10-87 38-110 (274)
306 3m1a_A Putative dehydrogenase; 23.1 2.2E+02 0.0075 21.8 6.6 68 10-87 22-90 (281)
307 4evq_A Putative ABC transporte 23.0 1.8E+02 0.0061 23.1 6.2 34 76-110 206-239 (375)
308 3rku_A Oxidoreductase YMR226C; 22.9 1.6E+02 0.0055 23.0 5.8 25 62-87 102-126 (287)
309 3kkj_A Amine oxidase, flavin-c 22.9 71 0.0024 23.4 3.5 32 77-112 3-34 (336)
310 1sc6_A PGDH, D-3-phosphoglycer 22.8 1.3E+02 0.0044 25.3 5.4 84 9-99 160-249 (404)
311 3gem_A Short chain dehydrogena 22.8 2.3E+02 0.008 21.6 6.7 27 60-87 84-110 (260)
312 2fca_A TRNA (guanine-N(7)-)-me 22.7 78 0.0027 23.5 3.7 34 77-114 40-73 (213)
313 2hq1_A Glucose/ribitol dehydro 22.7 2.4E+02 0.0081 20.9 9.4 72 10-87 22-94 (247)
314 1mx3_A CTBP1, C-terminal bindi 22.7 3.1E+02 0.011 22.3 8.9 84 9-99 183-275 (347)
315 1gdh_A D-glycerate dehydrogena 22.6 3E+02 0.01 22.1 9.4 84 9-99 161-254 (320)
316 4dup_A Quinone oxidoreductase; 22.5 1.5E+02 0.0052 23.9 5.7 81 9-109 184-264 (353)
317 2ph3_A 3-oxoacyl-[acyl carrier 22.5 2.4E+02 0.0081 20.8 9.5 73 10-87 18-91 (245)
318 3ckk_A TRNA (guanine-N(7)-)-me 22.5 79 0.0027 24.1 3.7 34 77-114 48-81 (235)
319 3ua3_A Protein arginine N-meth 22.4 69 0.0023 29.5 3.7 35 79-113 413-456 (745)
320 2bgk_A Rhizome secoisolaricire 22.4 2.6E+02 0.0088 21.2 8.5 71 10-87 33-103 (278)
321 3op4_A 3-oxoacyl-[acyl-carrier 22.3 2.5E+02 0.0086 21.1 8.2 69 10-87 26-94 (248)
322 4h08_A Putative hydrolase; GDS 22.0 1.4E+02 0.0048 21.4 5.0 38 75-112 73-120 (200)
323 3t37_A Probable dehydrogenase; 21.9 58 0.002 27.9 3.2 35 75-113 16-51 (526)
324 2c0c_A Zinc binding alcohol de 21.9 2.5E+02 0.0084 22.7 6.9 82 8-109 179-260 (362)
325 4dzr_A Protein-(glutamine-N5) 21.8 2.1E+02 0.0072 20.4 6.0 47 65-115 17-66 (215)
326 3c3k_A Alanine racemase; struc 21.7 96 0.0033 23.8 4.2 34 75-110 183-220 (285)
327 2x9g_A PTR1, pteridine reducta 21.6 2.8E+02 0.0096 21.3 7.9 76 10-87 40-117 (288)
328 4b7c_A Probable oxidoreductase 21.5 1.8E+02 0.0061 23.1 5.9 82 9-109 166-247 (336)
329 1usg_A Leucine-specific bindin 21.5 2.4E+02 0.0084 21.9 6.7 35 76-111 193-227 (346)
330 3uko_A Alcohol dehydrogenase c 21.5 3.3E+02 0.011 22.1 8.7 84 9-109 209-294 (378)
331 1i9g_A Hypothetical protein RV 21.3 2.2E+02 0.0077 21.6 6.3 47 65-114 87-135 (280)
332 1id1_A Putative potassium chan 21.2 2.1E+02 0.007 19.7 10.3 88 7-109 16-104 (153)
333 3hg7_A D-isomer specific 2-hyd 21.1 3.1E+02 0.011 22.2 7.2 97 9-114 155-259 (324)
334 1ve1_A O-acetylserine sulfhydr 21.0 3.1E+02 0.01 21.6 8.3 33 79-114 64-96 (304)
335 3miz_A Putative transcriptiona 20.9 1.1E+02 0.0036 23.8 4.3 43 65-110 187-233 (301)
336 1rjw_A ADH-HT, alcohol dehydro 20.9 2.7E+02 0.0093 22.1 6.9 82 8-109 179-260 (339)
337 1sny_A Sniffer CG10964-PA; alp 20.8 2.7E+02 0.0093 20.9 6.8 73 10-88 38-114 (267)
338 1pl8_A Human sorbitol dehydrog 20.8 3.2E+02 0.011 21.9 7.4 85 9-109 187-272 (356)
339 3jyn_A Quinone oxidoreductase; 20.7 1.4E+02 0.0048 23.7 5.1 81 9-109 157-238 (325)
340 3tpc_A Short chain alcohol deh 20.6 2.5E+02 0.0086 21.1 6.4 69 10-87 24-92 (257)
341 3jug_A Beta-mannanase; TIM-bar 20.6 3.3E+02 0.011 22.2 7.3 79 8-86 58-146 (345)
342 4e7p_A Response regulator; DNA 20.5 2E+02 0.0068 19.2 8.1 39 76-114 66-105 (150)
343 3m89_A FTSZ/tubulin-related pr 20.5 1.1E+02 0.0036 26.2 4.3 22 76-97 147-169 (427)
344 1xg5_A ARPG836; short chain de 20.5 2.9E+02 0.0099 21.1 9.1 73 10-87 49-122 (279)
345 2j6i_A Formate dehydrogenase; 20.5 3.6E+02 0.012 22.1 8.0 84 9-99 179-273 (364)
346 3id6_C Fibrillarin-like rRNA/T 20.4 1.5E+02 0.0052 22.7 5.0 50 62-114 58-112 (232)
347 3crv_A XPD/RAD3 related DNA he 20.3 1.2E+02 0.0041 26.4 4.9 53 59-114 5-58 (551)
348 2ri0_A Glucosamine-6-phosphate 20.2 1.1E+02 0.0037 23.2 4.1 18 81-98 31-48 (234)
349 3gqv_A Enoyl reductase; medium 20.1 1.8E+02 0.0063 23.6 5.8 81 9-109 181-262 (371)
350 1e3i_A Alcohol dehydrogenase, 20.1 3.5E+02 0.012 21.8 7.7 84 9-109 211-296 (376)
351 1hdc_A 3-alpha, 20 beta-hydrox 20.1 2.9E+02 0.0097 20.8 7.2 68 10-87 22-90 (254)
352 3vrd_B FCCB subunit, flavocyto 20.1 1E+02 0.0036 25.1 4.3 34 79-114 5-38 (401)
No 1
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=5.6e-48 Score=327.99 Aligned_cols=224 Identities=49% Similarity=0.845 Sum_probs=201.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++++.|||+|++++...+++++.+.++++++++++++|++||+||.++++||.|++.||++|+++.||+|
T Consensus 102 ~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t~~~Ei~~q~~~~~d~v 181 (334)
T 3tbh_A 102 MPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCF 181 (334)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHTHHHHHHHHTTSCCSEE
T ss_pred ECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 68999999999999999999999864458889999999988876899999999999888999999999999997789999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.++|+.+|++|||||||++++++..+++.++.+++++.+..|+.+.++++|+.+.|+|+|++++++
T Consensus 182 v~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~ 261 (334)
T 3tbh_A 182 IAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETAL 261 (334)
T ss_dssp EEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHH
T ss_pred EeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCCcCCeecCCCCCCcCCHHHHHHhCCEEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999999887777777778899887778888889999999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCCCC
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPI 224 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~~~ 224 (225)
.|++++|+++||+||++++|+++++++...++++||+++|++|+||+++++|++.|.+..++++
T Consensus 262 ~l~~~egi~~epssgaa~aa~~~~~~~~~~~g~~Vv~v~t~~g~ky~~~~~~~~~~~~~~~~~~ 325 (334)
T 3tbh_A 262 KLTRSDGVFCGFSGGANVYAALKIAERPEMEGKTIVTVIPSFGERYLSTTLYRSVRDEVSSLPV 325 (334)
T ss_dssp HHHHHHCCCBCHHHHHHHHHHHHHHHSGGGTTCEEEEEECBBGGGGTTSGGGTHHHHC------
T ss_pred HHHHHcCeEEcHHHHHHHHHHHHHHHhccCCcCeEEEEECCCCccccCchhhhhhHHHhhhcch
Confidence 9999999999999999999999998764346889999999999999999999999999988775
No 2
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-47 Score=332.66 Aligned_cols=224 Identities=70% Similarity=1.129 Sum_probs=203.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++++.|+++++.|||+|+++++..+++++.+.+++++++.++++|++||+||.++++||.|++.||++|+++.||+|
T Consensus 205 mP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~a~EI~eQl~~~~D~v 284 (430)
T 4aec_A 205 MPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIF 284 (430)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTSCEEEE
T ss_pred EcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHHHHHHHHHcCCCCCEE
Confidence 68999999999999999999999864568899999999998877899999999999878999999999999997789999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.++|+.+|+++||||||++++++..+++.++.++||+.+..|+.+..+++|+.+.|+|+|++++++
T Consensus 285 VvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~vd~~v~Vsd~ea~~a~r 364 (430)
T 4aec_A 285 VAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAK 364 (430)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTCSEEEEECHHHHHHHHH
T ss_pred EEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHHHHHhCCeEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999999888777778888999988778888889999999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCCCC
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPI 224 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~~~ 224 (225)
.|+++||+++||++|++++|+++++++...++++||+|+|++|.||+++++|+++..+...+++
T Consensus 365 ~La~~eGi~vepssGaa~aAal~la~~~~~~g~~VV~Il~d~G~rylst~~~~~~~~~~~~~~~ 428 (430)
T 4aec_A 365 QLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGERYLSTPLFQSIREEVEKMQP 428 (430)
T ss_dssp HHHHHHCCCBCHHHHHHHHHHHHHTTSGGGTTCEEEEEECBBGGGGTTSHHHHHHHHHC-----
T ss_pred HHHHHCCCEEehHHHHHHHHHHHHHHhcCCCcCeEEEEECCCCccccchhhhhhhhhhhhcCcc
Confidence 9999999999999999999999998765457899999999999999999999999998887765
No 3
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=3e-47 Score=324.48 Aligned_cols=224 Identities=59% Similarity=1.014 Sum_probs=203.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|+.+++..++.++...+.++..+.++.++++||+||.++++||+|++.||++|+++.||+|
T Consensus 117 mP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~EI~eq~~~~~d~v 196 (344)
T 3vc3_A 117 MPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIF 196 (344)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHHHHHHHTTTCCCEE
T ss_pred ECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHHHHHHHhCCCceEE
Confidence 79999999999999999999999865445566666666666667899999999999888999999999999998889999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+||+++|++.++|+.+|+++||+|||.+++++..+++.++.+.+++....+.....+.+|..+.|+|+|++++++
T Consensus 197 v~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~~v~v~d~eai~a~~ 276 (344)
T 3vc3_A 197 VMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMAR 276 (344)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHH
T ss_pred EEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCCCCeeEecccccccCcccchhhceEEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888888888887777777788899999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCCCC
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPI 224 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~~~ 224 (225)
+|+++||++++|+||++++|++++++....++++||+|+|++|+||+|+++|++|+.+..++.|
T Consensus 277 ~L~~~eGi~v~~ssga~~~aAl~~a~~~~~~g~~VV~il~d~G~rYlst~~~~~~~~e~~~~~p 340 (344)
T 3vc3_A 277 VLALKEGLMVGISSGANTVAALRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENMQP 340 (344)
T ss_dssp HHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGGGGTTSTTTHHHHHHHHTCCC
T ss_pred HHHHHCCCEEehhHHHHHHHHHHHhccccCCCCEEEEEECCCchhhccchhhHHHHHHhccCCC
Confidence 9999999999999999999999988765467899999999999999999999999999888765
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=1.2e-45 Score=312.49 Aligned_cols=224 Identities=67% Similarity=1.129 Sum_probs=201.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|+++++..+++++.+.+++++++.++++|++||+|+.++..||.|++.||++|+++.||+|
T Consensus 97 ~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~v 176 (322)
T 1z7w_A 97 MPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGF 176 (322)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEE
T ss_pred eCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 68999999999999999999999864457889999999998876899999999999877899999999999997679999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.+||+.+|.+||++|||++++.+..+++.++.+++++.+..++.+..+++++.+.|+|+|++++++
T Consensus 177 vvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~ 256 (322)
T 1z7w_A 177 VSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMAR 256 (322)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHH
T ss_pred EEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCCCCCCcccCcCcCCCCChhhhHHhCCEEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999998887666666778888877677778888999999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCCCC
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPI 224 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~~~ 224 (225)
.|++++|+++||+||++++|++++.++...++++||+++|++|.||++++++++|+.+...+.+
T Consensus 257 ~l~~~~gi~~~pssga~~aaa~~~~~~~~~~~~~vv~i~tg~g~k~~~~~~~~~~~~~~~~~~~ 320 (322)
T 1z7w_A 257 QLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTF 320 (322)
T ss_dssp HHHHHHSCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGGGGTTSGGGHHHHHHHHTCCC
T ss_pred HHHHHcCceEchhHHHHHHHHHHHHHhcCCCCCeEEEEECCCCcccccchhhhHHHHhcccccc
Confidence 9999999999999999999999987654335789999999999999999999999888776643
No 5
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=8.5e-45 Score=306.12 Aligned_cols=215 Identities=55% Similarity=0.922 Sum_probs=185.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|+.++...+++++.+.+++++++.+..++++||+||.++..||.|++.||++|++++||+|
T Consensus 97 ~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~Ei~~q~~~~~d~v 176 (313)
T 2q3b_A 97 MPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIV 176 (313)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEE
T ss_pred ECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHHHHHHHcCCCCCEE
Confidence 68999999999999999999999964457889999999998875458899999999855779999999999997679999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.+||+.+|.+|||+|||++++.+...+..++.+++++.+..|+.+....+++.+.|+|+|++++++
T Consensus 177 vvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~ 256 (313)
T 2q3b_A 177 VAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVAR 256 (313)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHH
T ss_pred EEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCCCCCCcccCCcCCCCCChhhhHhhccEEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999998776555556778888877667777788899999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhH
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 215 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~ 215 (225)
.|++++|+++|||||++++|++++.++...++++||+++|++|.||+++++|++|
T Consensus 257 ~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~vv~v~~~~g~ky~~~~~~~~~ 311 (313)
T 2q3b_A 257 RLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADV 311 (313)
T ss_dssp HHHHHHSCCBCHHHHHHHHHHHHHHTCGGGTTCEEEEEECBBSGGGC--------
T ss_pred HHHHHcCceEchHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCcccccchhhhhh
Confidence 9999999999999999999999988654236789999999999999999767655
No 6
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=1.3e-44 Score=305.32 Aligned_cols=216 Identities=56% Similarity=0.866 Sum_probs=187.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe-EEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNG-YILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
||+++|+.|+++|+.|||+|++++...+++++.+.+++++++.++. |+++||+||.++.+||.|++.||++|++++||+
T Consensus 92 ~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~ 171 (316)
T 1y7l_A 92 MPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDV 171 (316)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEE
T ss_pred ECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCCCE
Confidence 6899999999999999999999996435888999999999887556 889999999987779999999999999766999
Q ss_pred EEEecCcchhHHHHHHHHHhhC-CCcEEEEEeCCCCccccC---CC---CccccccccCCCCCcccccccCcCeEEEeCH
Q 027277 80 FIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLNG---GQ---PGKHLIQGIGAGVIPPVLDVAMLDEVITVSS 152 (225)
Q Consensus 80 iv~~~G~Gg~~aGi~~~~k~~~-~~~~vigVe~~~~~~~~~---~~---~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d 152 (225)
||+|+|+|||++|++.+||+++ |.+|||+|||++++.+.. ++ ..++.+++++.+..|+.+.++.+++.+.|+|
T Consensus 172 vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d 251 (316)
T 1y7l_A 172 VVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDS 251 (316)
T ss_dssp EEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTTCCGGGCCEEEEECH
T ss_pred EEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCccccccccCCccCCCCcccCcCCCCCCCchhhHhhCCEEEEECH
Confidence 9999999999999999999998 999999999999976542 11 2356678888776677787888999999999
Q ss_pred HHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHH
Q 027277 153 EEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIR 216 (225)
Q Consensus 153 ~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~ 216 (225)
+|++++++.|++++|+++||+||++++|+++++++...++++||+++|++|.||+++++|++|.
T Consensus 252 ~e~~~a~~~l~~~~gi~~epssa~~laa~~~~~~~~~~~~~~vv~i~tg~g~k~~~~~~~~~~~ 315 (316)
T 1y7l_A 252 DTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFADKLIVVILPSASERYLSTALFEGIE 315 (316)
T ss_dssp HHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBCSSCCCTTTC----
T ss_pred HHHHHHHHHHHHhhCCeEcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCCCcccCCcccccccc
Confidence 9999999999999999999999999999999886542367899999999999999998777663
No 7
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=1.1e-43 Score=297.98 Aligned_cols=211 Identities=38% Similarity=0.696 Sum_probs=182.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|++++...+++++.+.+++++++.+++ |++||+||.++.+||.|++.||++|+++.||+|
T Consensus 91 ~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~v 169 (303)
T 2v03_A 91 MPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHF 169 (303)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEE
T ss_pred ECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHHHHhCCCCCEE
Confidence 6899999999999999999999997556889999999998885477 999999999866799999999999997679999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.+||+.+|.+|||+|||++++++.. +++++.+..|..+.++++++.+.|+|+|++++++
T Consensus 170 vvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~-------~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~ 242 (303)
T 2v03_A 170 VSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG-------IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMR 242 (303)
T ss_dssp EEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTT-------CCCCCGGGCCTTCCGGGCSEEEEECHHHHHHHHH
T ss_pred EEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCccccc-------CCcCCCCCCCcccchHHCCEEEEECHHHHHHHHH
Confidence 999999999999999999999999999999999987652 4566555556667778899999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCC
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 222 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~ 222 (225)
.|++++|+++||+||++++|++++.++. ++++||+++|++|.||+++++|++|+ ..+++
T Consensus 243 ~l~~~~gi~~~pssa~alaa~~~~~~~~--~~~~vv~i~tg~~~ky~~~~~~~~~~-~~~~~ 301 (303)
T 2v03_A 243 ELAVREGIFCGVSSGGAVAGALRVAAAN--PDAVVVAIICDRGDRYLSTGVFGEEH-FSQGA 301 (303)
T ss_dssp HHHHHHCCCBCHHHHHHHHHHHHHHHHS--TTCEEEEEECBBSGGGGGGTTTCC--------
T ss_pred HHHHHcCceEcHHHHHHHHHHHHHHHHC--CCCeEEEEECCCCcccccchhcHHHH-HhccC
Confidence 9999999999999999999999988764 67899999999999999997787655 34443
No 8
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=6.2e-44 Score=304.18 Aligned_cols=220 Identities=43% Similarity=0.761 Sum_probs=194.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe-EEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNG-YILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
||+++|+.|+++|+.+||+|++++...+++++.+.+++++++.++. |+++||+||.++.+||.|++ ||++|+++.||+
T Consensus 108 ~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~~t~~-Ei~~q~~~~~d~ 186 (343)
T 2pqm_A 108 MPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDI 186 (343)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHHHHHH-HHHHHTTTCEEE
T ss_pred ECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHHHHHH-HHHHHcCCCCCE
Confidence 6899999999999999999999996445788999999999887555 77899999998779999999 999999767999
Q ss_pred EEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHH
Q 027277 80 FIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETS 159 (225)
Q Consensus 80 iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~ 159 (225)
||+|+|+|||++|++.+||+++|.+|||+|||++++.+..++..++.+++++.+..|+.+...++++.+.|+|+|+++++
T Consensus 187 vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~ 266 (343)
T 2pqm_A 187 VVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMA 266 (343)
T ss_dssp EEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTCCCCCCCCTTCCCSSCCTTCCGGGCCEEEEECHHHHHHHH
T ss_pred EEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccCCCCCeecCccCCCCCCHHHHHHhCCeEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999877665566677889887767777888899999999999999999
Q ss_pred HHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCC
Q 027277 160 KLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 222 (225)
Q Consensus 160 ~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~ 222 (225)
++|++++|+++||+||++++|+++++++...++++||+++|++|.||+++++|+ .|.+.+++
T Consensus 267 ~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~vv~i~tg~g~ky~~~~~~~-~~~~~~~~ 328 (343)
T 2pqm_A 267 RAVVKYDGIMCGMSSGAAILAGLKEAEKPENEGKTIVIIVPSCGERYLSTDLYK-IKDEGTKI 328 (343)
T ss_dssp HHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGGGGTTSSTTT-SCCCSCHH
T ss_pred HHHHHHhCCeEchhHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCccccchhhhh-hHhhcCCC
Confidence 999999999999999999999999886642367899999999999999997665 45555554
No 9
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=9.3e-44 Score=299.15 Aligned_cols=210 Identities=54% Similarity=0.871 Sum_probs=158.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|++++...+++++.+.+++++++. ++++++||+||.++.+||.|++.||++|+++.||+|
T Consensus 95 ~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~v 173 (308)
T 2egu_A 95 MPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAF 173 (308)
T ss_dssp EESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHHHHHHHTTCCCEE
T ss_pred ECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHHHHHHcCCCCCEE
Confidence 6899999999999999999999996445788999999998887 458889999999867899999999999997679999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.+||+++|.+|||+|||++++.+..++..++.+++++.+..|+.+....+++.+.|+|+|++++++
T Consensus 174 vvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~ 253 (308)
T 2egu_A 174 VAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAAR 253 (308)
T ss_dssp EEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-----------------------CCCCCCSCSEEEEECHHHHHHHHH
T ss_pred EEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCCCCCCcccCccCCCCCCHhHHHHhcCeEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999997776555556677888776667777788899999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhc
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALF 212 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~ 212 (225)
+|++++|+++|||||++++|++++.++. .++++||+++|++|.||+++.+|
T Consensus 254 ~l~~~~gi~~epssa~a~aa~~~~~~~~-~~~~~vv~i~tg~g~ky~~~~~~ 304 (308)
T 2egu_A 254 RAAREEGILGGISSGAAIHAALKVAKEL-GKGKKVLAIIPSNGERYLSTPLY 304 (308)
T ss_dssp HHHHHHCCCBCHHHHHHHHHHHHHHHHH-CTTCEEEEEECBBGGGGTTSSTT
T ss_pred HHHHHhCceEcHHHHHHHHHHHHHHHhc-CCCCeEEEEECCCCcccccchhc
Confidence 9999999999999999999999987764 46789999999999999998766
No 10
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=3.2e-43 Score=295.38 Aligned_cols=212 Identities=44% Similarity=0.757 Sum_probs=188.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.+||+|+.++...+++++.+.+++++++. +++|++||+||.++..||.|++.||++|+++.||+|
T Consensus 92 ~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~g~~~t~~~Ei~~q~~~~~d~v 170 (304)
T 1ve1_A 92 MPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEEL-GAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAF 170 (304)
T ss_dssp EETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHH-TCBCCCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEE
T ss_pred eCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhcC-CCEeCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEE
Confidence 6889999999999999999999996444889999999998874 788999999999844447999999999997679999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.+||+++|.+|||+|||++++.+..+++.++.+++++.+..|+.+.++++++.+.|+|+|++++++
T Consensus 171 vvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~ 250 (304)
T 1ve1_A 171 VYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLAR 250 (304)
T ss_dssp EEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHH
T ss_pred EEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCcccCCCCCCCCChhhhhhhCCEEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999998776666666777888877677778888999999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchh
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFES 214 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~ 214 (225)
+|++++|+++||+||++++|++++.++. .++++||+++|++|.||+++.+|++
T Consensus 251 ~l~~~~gi~~epssa~a~aa~~~~~~~~-~~~~~vv~i~tg~g~ky~~~~~~~~ 303 (304)
T 1ve1_A 251 RLAREEGLFLGMSSGGIVWAALQVAREL-GPGKRVACISPDGGWKYLSTPLYAE 303 (304)
T ss_dssp HHHHHHCCCBCHHHHHHHHHHHHHHHHH-CTTCEEEEEECBBSGGGTTSTTTC-
T ss_pred HHHHHhCcEEcHHHHHHHHHHHHHHHhc-CCCCeEEEEECCCCccCCCcccCCC
Confidence 9999999999999999999999987653 3678999999999999999867764
No 11
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=9.2e-44 Score=301.11 Aligned_cols=208 Identities=33% Similarity=0.560 Sum_probs=184.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++++.|||+|++++...+++++.+.++++++++++++|++||+||.++.+||.|++.||++|++. ||+|
T Consensus 103 ~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~~g~~t~~~Ei~~q~~~-~d~v 181 (325)
T 3dwg_A 103 MPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADLPE-ITHF 181 (325)
T ss_dssp EESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHHHHHHTHHHHHHHHCTT-CCEE
T ss_pred ECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHHHHHHHHHHHHHHhcCC-CCEE
Confidence 689999999999999999999999755689999999999988756899999999998668999999999999964 9999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSK 160 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~ 160 (225)
|+|+|+|||++|++.+||+.+|++|||+|||++++.+. .+.+++.+..|+.+.++++++.+.|+|+|++++++
T Consensus 182 v~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~-------~~~~i~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~ 254 (325)
T 3dwg_A 182 VAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGVY-------ALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTR 254 (325)
T ss_dssp EEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGGG-------CCSSGGGCCCCTTCCGGGCSEEEEEEHHHHHHHHH
T ss_pred EEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcchh-------ccCcccCCcCcccccHhhCCeEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999997662 24556555567777888999999999999999999
Q ss_pred HHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCE--EEEEecCCCCCCcChhhchhHH
Q 027277 161 LLALKEGLLVGISSGAAAAAAIRVAKRPENAGKL--IVVIFPSAGERYLSTALFESIR 216 (225)
Q Consensus 161 ~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~--vv~v~~~gG~~~~~~~~~~~~~ 216 (225)
.|++++|+++||+||++++|+++++++...++++ ||+++|++|.||+++.+|++..
T Consensus 255 ~l~~~egi~~epssa~a~aa~~~~~~~~~~~g~~~~Vv~i~~g~g~ky~~~~~~~~~~ 312 (325)
T 3dwg_A 255 ELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGSL 312 (325)
T ss_dssp HHHHHHCCCBCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBBGGGGGGGTTTSSCH
T ss_pred HHHHHcCceechhHHHHHHHHHHHHHHhccCCCCCeEEEEECCCCccccCchhhcCCc
Confidence 9999999999999999999999987653224566 9999999999999997787643
No 12
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=5.3e-43 Score=293.91 Aligned_cols=207 Identities=53% Similarity=0.805 Sum_probs=186.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|+++++..+++++.+.+++++++. ++++++||+||.++.+||.|+++||++|+++.||+|
T Consensus 95 ~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~v 173 (303)
T 1o58_A 95 MPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAF 173 (303)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEE
T ss_pred ECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEE
Confidence 6899999999999999999999986434889999999998887 678899999999877799999999999997669999
Q ss_pred EEecCcchhHHHHHHHHHhhCCC-cEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcCeEEEeCHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPN-IKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETS 159 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~-~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~ 159 (225)
|+|+|+|||++|++.++|+++|. +|||+|||++++++..++..++.+++++.+..++.+..+++++.+.|+|+|+++++
T Consensus 174 vvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~ 253 (303)
T 1o58_A 174 VAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMA 253 (303)
T ss_dssp EEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHH
T ss_pred EEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCCCCCCeecCcCCCCCcCHHHHHHhCCeEEEECHHHHHHHH
Confidence 99999999999999999999999 99999999999888766666677888887766777777889999999999999999
Q ss_pred HHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 160 KLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 160 ~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
++|++++|+++||+||++++|++++.++. .++++||+++|++|.||+++
T Consensus 254 ~~l~~~~gi~~epssa~alaa~~~~~~~~-~~~~~vv~i~tg~g~ky~~~ 302 (303)
T 1o58_A 254 RYLAKKEGLLVGISSGANVAAALKVAQKL-GPDARVVTVAPDHAERYLSI 302 (303)
T ss_dssp HHHHHHHCCCBCHHHHHHHHHHHHHHHTS-CTTCCEEEEECBBGGGCTTT
T ss_pred HHHHHHcCceEcHHHHHHHHHHHHHHHHc-CCCCEEEEEECCCCcccccC
Confidence 99999999999999999999999988763 36789999999999999986
No 13
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=9.2e-42 Score=297.77 Aligned_cols=220 Identities=35% Similarity=0.563 Sum_probs=184.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHH---HHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCc
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEG---FVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKV 77 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~ 77 (225)
||+++++.|+++|+.|||+|++++...++++ ..+.+++++++.++.|+++||+|+.++.+||.|++.||++|+++.+
T Consensus 191 mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~~t~a~EI~eQl~~~~ 270 (435)
T 1jbq_A 191 MPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKL 270 (435)
T ss_dssp ECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCC
T ss_pred eCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999986434443 4677888888876788999999998888999999999999997679
Q ss_pred cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc-----CCCCccccccccCCCCCcccccccCcCeEEEeCH
Q 027277 78 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN-----GGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSS 152 (225)
Q Consensus 78 d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~-----~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d 152 (225)
|+||+|+|+|||++|++.+||+..|++|||||||.++..+. .+....+.+++++.+..+..+....+|+.+.|+|
T Consensus 271 D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~~l~~~~vd~~~~Vsd 350 (435)
T 1jbq_A 271 DMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSND 350 (435)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECH
T ss_pred CEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhhchhhhhcCCCcceeecccccCccchhhhhhhccceEEeCH
Confidence 99999999999999999999999999999999999986542 1223345567887766666666788999999999
Q ss_pred HHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCC
Q 027277 153 EEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 222 (225)
Q Consensus 153 ~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~ 222 (225)
+|+++++++|++++||++||+||++++|+++++++. .++++||+|+|++|.||++++++ +.|+..+++
T Consensus 351 ~ea~~a~r~La~~eGilve~ssgaalaaa~~~~~~~-~~g~~VV~iltd~g~ky~~~~~~-~~w~~~~~~ 418 (435)
T 1jbq_A 351 EEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQEL-QEGQRCVVILPDSVRNYMTKFLS-DRWMLQKGF 418 (435)
T ss_dssp HHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGGGC-CTTCEEEEEECBBGGGGTTTTTC-HHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCEEcHHHHHHHHHHHHHHHHc-CCCCeEEEEEcCCcccccchhhc-cHHHHhcCC
Confidence 999999999999999999999999999999988763 35789999999999999999555 555555565
No 14
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=4.4e-41 Score=301.43 Aligned_cols=221 Identities=31% Similarity=0.499 Sum_probs=192.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChH---HHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCc
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFE---GFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKV 77 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~ 77 (225)
||+++|+.|+++++.|||+|+.++...+++ .+.+.+++++++.++.+|++||+||.++.+||.|++.||++|+++.|
T Consensus 143 ~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g~~t~~~Ei~~q~~~~~ 222 (527)
T 3pc3_A 143 MPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKV 222 (527)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCC
T ss_pred EcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHHHHHHHHHHHHhcCCCC
Confidence 689999999999999999999998643444 36778889988876788899999998889999999999999997689
Q ss_pred cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccC-----CCCccccccccCCCCCcccccccCcCeEEEeCH
Q 027277 78 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNG-----GQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSS 152 (225)
Q Consensus 78 d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~-----~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d 152 (225)
|+||+|+|+|||++|++.+||+.+|+++||||||++++.+.. +...++.++|++.+..|..+.++++|+.+.|+|
T Consensus 223 d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~p~~~~~~~~d~~~~V~d 302 (527)
T 3pc3_A 223 DMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGD 302 (527)
T ss_dssp SEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECG
T ss_pred CEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccccchhhcCCCCCceeccccCCCCCCcccchhhCcEEEEECH
Confidence 999999999999999999999999999999999999975431 223456678888887787788889999999999
Q ss_pred HHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCCC
Q 027277 153 EEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMP 223 (225)
Q Consensus 153 ~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~~ 223 (225)
+|++++++.|+++|||++||+||++++|+++++++. .+++++|+++|++|.+|++++ |++.|...+|+.
T Consensus 303 ~e~~~a~r~l~~~eGi~~~pssa~alaaal~~~~~~-~~~~~vv~i~~d~g~ryls~~-~~~~~l~~rg~~ 371 (527)
T 3pc3_A 303 SDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKL-KKGQRCVVILPDGIRNYMTKF-VSDNWMEARNFK 371 (527)
T ss_dssp GGTHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTTC-CTTCEEEEEECBBGGGGTTTT-TSHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHc-CCCCeEEEEEcCcchhhHhhh-hcHHHHHhcCCc
Confidence 999999999999999999999999999999998753 467899999999999999984 555666666654
No 15
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=8.8e-40 Score=278.83 Aligned_cols=203 Identities=23% Similarity=0.341 Sum_probs=172.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++++.|||+|+++++ +++++.+.+++++++. +++|++||+||.+ ++||+|++.||++|+ +.||+|
T Consensus 106 ~p~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~i~~~~np~~-~~g~~t~~~Ei~~q~-~~~d~v 180 (346)
T 3l6b_A 106 VPQTAPDCKKLAIQAYGASIVYCEP--SDESRENVAKRVTEET-EGIMVHPNQEPAV-IAGQGTIALEVLNQV-PLVDAL 180 (346)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECS--SHHHHHHHHHHHHHHH-TCEECCSSSCHHH-HHHHHHHHHHHHHHS-TTCCEE
T ss_pred ECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHHHHHHHHHhC-CCCCEE
Confidence 6899999999999999999999985 5789999999998887 6899999999987 899999999999999 579999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC------ccccccccCCC--CCcccccccCcCeEE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP------GKHLIQGIGAG--VIPPVLDVAMLDEVI 148 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~------~~~~~~gl~~~--~~~~~~~~~~~~~~~ 148 (225)
|+|+|+|||++|++.+||+.+|++|||||||++++++. .+++ ..+..+++... ...+.+.++++|+.+
T Consensus 181 vv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~g~~~~~~~~~~~d~~~ 260 (346)
T 3l6b_A 181 VVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIGLNTWPIIRDLVDDIF 260 (346)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCCTTHHHHHHHHCCEEE
T ss_pred EEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHHHHHHHcCCccccCCCCCchhhhccCCCcHHHHHHHHHcCCeEE
Confidence 99999999999999999999999999999999987542 2221 12344666532 223345567899999
Q ss_pred EeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCC-CCCCEEEEEecCCCCCCcCh
Q 027277 149 TVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPE-NAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 149 ~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~-~~~~~vv~v~~~gG~~~~~~ 209 (225)
.|+|+|+.++++.|++++|+++||+||++++|+++...+.. .++++||+++ ||||+|+++
T Consensus 261 ~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~Vv~i~-sGG~~d~~~ 321 (346)
T 3l6b_A 261 TVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVL-SGGNVDLTS 321 (346)
T ss_dssp EECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHSGGGGGSCTTCCEEEEEE-CBCCCCTTG
T ss_pred EECHHHHHHHHHHHHHHCCcEEcHHHHHHHHHHHHhhhhhccCCCCeEEEEc-CCCCCCHHH
Confidence 99999999999999999999999999999999987653322 3567777777 899999998
No 16
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=8.4e-40 Score=278.65 Aligned_cols=203 Identities=24% Similarity=0.298 Sum_probs=174.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|+++++ +++++.+.+++++++. +++|++||+||.+ +.||.|++.||++|++ .||+|
T Consensus 118 ~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~-~~d~v 192 (342)
T 2gn0_A 118 MPKGAPKSKVAATCDYSAEVVLHGD--NFNDTIAKVSEIVETE-GRIFIPPYDDPKV-IAGQGTIGLEIMEDLY-DVDNV 192 (342)
T ss_dssp ECTTSCHHHHHHHHHHSCEEEECCS--SHHHHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHHHHHHHCT-TCCEE
T ss_pred ECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCHHH-HHHHHHHHHHHHHHcC-CCCEE
Confidence 6999999999999999999999985 5889999999998886 7899999999987 8999999999999995 69999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC-----ccccccccCCCC---CcccccccCcCeEE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGV---IPPVLDVAMLDEVI 148 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~gl~~~~---~~~~~~~~~~~~~~ 148 (225)
|+|+|+|||++|++.+||+.+|.+||++|||++++++. .++. ..+.+++++.+. .++.+.++++|+.+
T Consensus 193 vvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~s~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~d~~~ 272 (342)
T 2gn0_A 193 IVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIV 272 (342)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHHHHCCEEE
T ss_pred EEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHHHHHHcCCccccCCCCccccccCCCCccHHHHHHHHHcCCEEE
Confidence 99999999999999999999999999999999987653 2332 245567887542 23445678899999
Q ss_pred EeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 149 TVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 149 ~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
.|+|+|+++++++|++++|+++||+||++++|++++.+++..++++||+++ |||+++++.
T Consensus 273 ~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~Vv~i~-tGg~~d~~~ 332 (342)
T 2gn0_A 273 LVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHIQNRKTVSII-SGGNIDLSR 332 (342)
T ss_dssp EECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHHTTSEEEEEE-CBCCCCHHH
T ss_pred EECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHhhhhccCCCCEEEEEE-CCCCCCHHH
Confidence 999999999999999999999999999999999987642113678888888 789987774
No 17
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=2.4e-38 Score=280.05 Aligned_cols=203 Identities=23% Similarity=0.284 Sum_probs=175.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++++.|||+|+.++ .+++++.+.+++++++. +++|++||+||.+ ++||+|++.||++|+++ +|+|
T Consensus 109 mP~~~p~~Kv~~~r~~GAeVvlv~--~~~dda~~~a~ela~e~-g~~~v~pfdnp~~-iaGqgTig~EI~eQl~~-~D~v 183 (514)
T 1tdj_A 109 MPTATADIKVDAVRGFGGEVLLHG--ANFDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQQDAH-LDRV 183 (514)
T ss_dssp CCSSCCHHHHHHHHHHSCEEECCC--SSHHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHHHCTT-CCEE
T ss_pred ECCCCCHHHHHHHHHCCCEEEEEC--CCHHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HHHHHHHHHHHHHHCCC-CCEE
Confidence 899999999999999999999998 47899999999999886 7899999999998 89999999999999964 9999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC-----ccccccccCCCCC---cccccccCcCeEE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVI---PPVLDVAMLDEVI 148 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~~~~~ 148 (225)
|+|+|+|||++|++.++|+++|.+|||||||++++++. .+++ ..+.++|++...+ ++.+.++++|+.+
T Consensus 184 vvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~~sl~~G~~~~l~~v~tiadGiav~~~g~~~~~l~~~~vd~~v 263 (514)
T 1tdj_A 184 FVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDII 263 (514)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHHHHHHHTSCCCCSCCCSSSSTTCCSSCCCHHHHHHTTSCCEEE
T ss_pred EEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHHHHHhcCCeeecCCccccccchhcCCCChHHHHHHHHhCCeEE
Confidence 99999999999999999999999999999999988764 2322 1234566665432 3456688999999
Q ss_pred EeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 149 TVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 149 ~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
.|+|+|+.++++.|++++|+++||+||++++|+++++++...+++++|+++ |||+.++++
T Consensus 264 ~Vsd~ei~~ai~~L~~~~givvEPsgA~alAal~~~~~~~~~~g~~VV~I~-tGgn~d~~~ 323 (514)
T 1tdj_A 264 TVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNIRGERLAHIL-SGANVNFHG 323 (514)
T ss_dssp EECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHTCCSCEEEEEC-CCCCCCTTH
T ss_pred EECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhcCCCCCeEEEEE-eCCCCCHHH
Confidence 999999999999999999999999999999999998765434678888888 778877764
No 18
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=4.5e-38 Score=269.87 Aligned_cols=205 Identities=19% Similarity=0.175 Sum_probs=172.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++++.|||+|+++++ +++++.+.+++++++.++++|++||+||.+ +.||.|++.||++|+++.||+|
T Consensus 123 ~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~D~v 199 (364)
T 4h27_A 123 VPGTTPALTIERLKNEGATVKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWEKPGAI 199 (364)
T ss_dssp EETTSCHHHHHHHHTTTCEEEEECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHH-HHHHTHHHHHHHHHCSSCCSEE
T ss_pred ECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHH-HHHHHHHHHHHHHHhCCCCCEE
Confidence 6899999999999999999999984 678999999999988768999999999988 8999999999999997679999
Q ss_pred EEecCcchhHHHHHHHHHhhC-CCcEEEEEeCCCCcccc----CCCC-----ccccccccCCCCCc---ccccccCcCeE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVIP---PVLDVAMLDEV 147 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~-~~~~vigVe~~~~~~~~----~~~~-----~~~~~~gl~~~~~~---~~~~~~~~~~~ 147 (225)
|+|+|+|||++|++.++|+++ |+++|++|||++++++. .++. ..+.+++|+.+..+ +.+.+++.+..
T Consensus 200 vvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~ 279 (364)
T 4h27_A 200 ALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGAQALKLFQEHPIFS 279 (364)
T ss_dssp EEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHTTSCEEE
T ss_pred EEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCcHHHHHHHHhcCCEE
Confidence 999999999999999999886 78999999999998663 2321 23445777665432 23446677888
Q ss_pred EEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHH-----HHhhcCCCC--CCEEEEEecCCCC-CCcCh
Q 027277 148 ITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAI-----RVAKRPENA--GKLIVVIFPSAGE-RYLST 209 (225)
Q Consensus 148 ~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~-----~~~~~~~~~--~~~vv~v~~~gG~-~~~~~ 209 (225)
+.|+|+|+++++++|+++||+++||+||++++|++ ++.+++..+ +++||+++ |||+ .+++.
T Consensus 280 ~~V~d~e~~~a~~~l~~~egi~~eps~aaalaa~~~~k~~~l~~~g~~~~~~~~Vv~v~-tGG~~~d~~~ 348 (364)
T 4h27_A 280 EVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIV-CGGSNISLAQ 348 (364)
T ss_dssp EEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCCEEEEEE-CBCSSCCHHH
T ss_pred EEECHHHHHHHHHHHHHHCCCeEcccHHHHHHHHHhhhhHHhhhccCcCCCCCeEEEEE-CCCCCCCHHH
Confidence 99999999999999999999999999999999986 555555433 57888888 6664 88875
No 19
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=7.3e-39 Score=269.64 Aligned_cols=200 Identities=23% Similarity=0.291 Sum_probs=169.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhC---CCc
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG---GKV 77 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~---~~~ 77 (225)
||+++|+.|+++|+.|||+|+++++ +++++.+.+++++++. +++|++||+||.+ +.||.|++.||++|++ +.|
T Consensus 95 ~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~ 170 (311)
T 1ve5_A 95 MPEDASPYKKACARAYGAEVVDRGV--TAKNREEVARALQEET-GYALIHPFDDPLV-IAGQGTAGLELLAQAGRMGVFP 170 (311)
T ss_dssp CCCC--CCHHHHHHHTTCEEECTTC--CTTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHHHHHHHHHHHTCCC
T ss_pred ECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCCCCCcch-hhhccHHHHHHHHHHHhcCCCC
Confidence 7999999999999999999999985 4788888999988876 7899999999988 7899999999999995 579
Q ss_pred cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC------ccccccccCCCC---CcccccccCc
Q 027277 78 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP------GKHLIQGIGAGV---IPPVLDVAML 144 (225)
Q Consensus 78 d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~------~~~~~~gl~~~~---~~~~~~~~~~ 144 (225)
|+||+|+|+|||++|++.+||+++|.+||++|||++++++. .++. ..+..+++..+. .++.+.++++
T Consensus 171 d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~~~i~~gl~~~~~~~~~~~~~~~~~ 250 (311)
T 1ve5_A 171 GAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGERTFPILRERV 250 (311)
T ss_dssp SEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCCSSCCTTTHHHHHHHC
T ss_pred CEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHHHHHHHcCCccccCCCCCeeeCcCCCCCccHHHHHHHHhcC
Confidence 99999999999999999999999999999999999987653 2322 234456666432 2334557788
Q ss_pred CeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcC
Q 027277 145 DEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLS 208 (225)
Q Consensus 145 ~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~ 208 (225)
++.+.|+|+|++++++.|++++|+++||+||++++|++++.++ . +++||+++ |||+.+++
T Consensus 251 ~~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~--~-~~~vv~i~-tgg~~d~~ 310 (311)
T 1ve5_A 251 DGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGAR--L-PQTLALLL-SGGNRDFS 310 (311)
T ss_dssp CEEEEECHHHHHHHHHHHHHHTCBCCCGGGGHHHHHHHHHGGG--S-CSEEEEEE-CBCCCCCC
T ss_pred CEEEEECHHHHHHHHHHHHHhcCceEchHHHHHHHHHHhhhhc--c-CCEEEEEE-CCCCCCCC
Confidence 9999999999999999999999999999999999999998876 4 77888888 88887664
No 20
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=1.5e-38 Score=273.18 Aligned_cols=203 Identities=22% Similarity=0.292 Sum_probs=177.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|+.++ .+++++.+.+++++++. +++|++||+|+.+ ++||+|++.||++|+ +.||+|
T Consensus 138 ~P~~~~~~k~~~~~~~GA~V~~v~--~~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~-i~g~~t~~~Ei~~q~-~~~d~v 212 (366)
T 3iau_A 138 MPTTTPQIKIDAVRALGGDVVLYG--KTFDEAQTHALELSEKD-GLKYIPPFDDPGV-IKGQGTIGTEINRQL-KDIHAV 212 (366)
T ss_dssp ECTTCCHHHHHHHHHTTCEEEECC--SSHHHHHHHHHHHHHHH-TCEECCSSSSHHH-HHHHHHHHHHHHHHC-CSEEEE
T ss_pred eCCCCCHHHHHHHHHCCCeEEEEC--cCHHHHHHHHHHHHHhc-CCEecCCCCChHH-HHHHHHHHHHHHHhc-CCCCEE
Confidence 699999999999999999999998 47899999999998886 7899999999988 799999999999999 689999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC-----ccccccccCCCCC---cccccccCcCeEE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVI---PPVLDVAMLDEVI 148 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~~~~~ 148 (225)
|+|+|+|||++|++.++|+++++++|++|||.+++++. .++. ..+..++++.+.. ++.+.++++++.+
T Consensus 213 vvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~ 292 (366)
T 3iau_A 213 FIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFAKCQELIDGMV 292 (366)
T ss_dssp EEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHHHHHHHTSCCEESCCCCSSGGGCCSSCCHHHHHHHHHHCCEEE
T ss_pred EEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHHHHHHcCCCCcCCCccchhhhhcCCCCcHHHHHHHHhcCCCce
Confidence 99999999999999999999999999999999997664 2322 1234567765432 3445678899999
Q ss_pred EeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 149 TVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 149 ~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
.|+|+|+.++++.|++++|+++||+||++++|+++++++...++++||+++ ||||.+++.
T Consensus 293 ~v~d~e~~~a~~~l~~~~gi~~ep~sa~alaa~~~~~~~~~~~g~~Vv~i~-tGgn~d~~~ 352 (366)
T 3iau_A 293 LVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYKIKNENIVAIA-SGANMDFSK 352 (366)
T ss_dssp EECHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHTTCCSCEEEEEE-CBCCCCGGG
T ss_pred eECHHHHHHHHHHHHHHcCcEEcHHHHHHHHHHHHHHHhcCCCCCeEEEEe-CCCCCCHHH
Confidence 999999999999999999999999999999999999877655678888888 889988885
No 21
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=1.6e-38 Score=268.93 Aligned_cols=201 Identities=24% Similarity=0.327 Sum_probs=171.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++++.|||+|+++++ +++++.+.+++++++. +++|++||+||.+ +.||+|++.||++|++ .||+|
T Consensus 104 ~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~l~~~~-~~~~i~~~~n~~~-~~g~~t~~~Ei~~q~~-~~d~v 178 (323)
T 1v71_A 104 MPLDAPEAKVAATKGYGGQVIMYDR--YKDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGTAAKELFEEVG-PLDAL 178 (323)
T ss_dssp EETTCCHHHHHHHHHTTCEEEEECT--TTTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTHHHHHHHHHHC-CCSEE
T ss_pred CCCCCcHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEecCCCCCcch-hhhHhHHHHHHHHhcC-CCCEE
Confidence 6899999999999999999999985 4567888889988876 6788999999987 7899999999999995 79999
Q ss_pred EEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC-----ccccccccCCCCC---cccccccCcCeEE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVI---PPVLDVAMLDEVI 148 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~~~~~ 148 (225)
|+|+|+|||++|++.+||+++|++|||+|||++++++. .++. ..+.+++++.+.. ++.+.++++++.+
T Consensus 179 v~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~ 258 (323)
T 1v71_A 179 FVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTFSIIKEKVDDIL 258 (323)
T ss_dssp EEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSCCHHHHHHHHHHCCEEE
T ss_pred EEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCcccccccCCCCcHHHHHHHHHhCCEEE
Confidence 99999999999999999999999999999999987553 2222 1345677765432 2345568899999
Q ss_pred EeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 149 TVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 149 ~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
.|+|+|+++++++|++++|+++||++|++++|++++.++ .++++||+++ |||+.+++.
T Consensus 259 ~v~d~e~~~a~~~l~~~~gi~~eps~a~alaa~~~~~~~--~~~~~vv~i~-tGg~~~~~~ 316 (323)
T 1v71_A 259 TVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEK--LKNKRIGIII-SGGNVDIER 316 (323)
T ss_dssp EECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTGGG--GTTCEEEEEE-CBCCCCHHH
T ss_pred EECHHHHHHHHHHHHHhcCeEEcHHHHHHHHHHHHhHHh--cCCCeEEEEe-CCCCCCHHH
Confidence 999999999999999999999999999999999998765 3678888888 889877764
No 22
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=6.6e-38 Score=269.48 Aligned_cols=216 Identities=18% Similarity=0.167 Sum_probs=174.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++++.|+++|+.|||+|+++++ +++++.+.+++++++.++++|++||+||.+ +.||.|++.||++|++..||+|
T Consensus 123 ~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~~-~~G~~t~~~Ei~~ql~~~~d~v 199 (372)
T 1p5j_A 123 VPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWEKPGAI 199 (372)
T ss_dssp ECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHHHHHHHCSSCCSEE
T ss_pred ECCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHHH-HhhHHHHHHHHHHHcCCCCCEE
Confidence 6999999999999999999999984 689999999999888558999999999998 8999999999999997669999
Q ss_pred EEecCcchhHHHHHHHHHhhC-CCcEEEEEeCCCCcccc----CCCC-----ccccccccCCCCCc---ccccccCcCeE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVIP---PVLDVAMLDEV 147 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~-~~~~vigVe~~~~~~~~----~~~~-----~~~~~~gl~~~~~~---~~~~~~~~~~~ 147 (225)
|+|+|+|||++|++.+||+++ |++|||+|||++++++. .+++ ..+.+++|+.+..+ +.+.+.+.++.
T Consensus 200 vvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~ 279 (372)
T 1p5j_A 200 ALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFS 279 (372)
T ss_dssp EEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHHHSCEEE
T ss_pred EEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHHHHHHcCCceecCCCceeecccCCCCCCHHHHHHHhhcCCEE
Confidence 999999999999999999986 88999999999987653 1221 13445777765443 23345677889
Q ss_pred EEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHH-----HhhcCC--CCCCEEEEEecCCCCCCcChhhchhHHHhcC
Q 027277 148 ITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIR-----VAKRPE--NAGKLIVVIFPSAGERYLSTALFESIRHEVE 220 (225)
Q Consensus 148 ~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~-----~~~~~~--~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~ 220 (225)
+.|+|+|++++++.|++++|+++||+||++++|+++ +.+++. .++++||+++|+|++.+++ .|+++. +..
T Consensus 280 ~~Vsd~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~l~~~g~~~~~~~~Vv~i~tgg~~~~~~--~~~~~~-~~~ 356 (372)
T 1p5j_A 280 EVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSNISLA--QLRALK-EQL 356 (372)
T ss_dssp EEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCSCEEEECCBCSSCCHH--HHHHHH-HHH
T ss_pred EEECHHHHHHHHHHHHHHcCCeechhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHH--HHHHHH-HHh
Confidence 999999999999999999999999999999999884 323332 3568888888544445655 455544 444
Q ss_pred CC
Q 027277 221 NM 222 (225)
Q Consensus 221 ~~ 222 (225)
|+
T Consensus 357 ~~ 358 (372)
T 1p5j_A 357 GM 358 (372)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 23
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=260.78 Aligned_cols=205 Identities=20% Similarity=0.182 Sum_probs=169.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
||+++|+.|+++|+.|||+|+++++ +++++.+.+++++++. +++|++||+||.+ +.||.|++.||++|++..||+|
T Consensus 84 ~p~~~~~~k~~~~~~~Ga~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~d~v 159 (318)
T 2rkb_A 84 LPESTSLQVVQRLQGEGAEVQLTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLI-WKGHASLVQELKAVLRTPPGAL 159 (318)
T ss_dssp ECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHH-HHHHHHHHHHHHHHSSSCCSEE
T ss_pred ECCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhh-ccchhHHHHHHHHhcCCCCCEE
Confidence 6999999999999999999999984 6889999999998875 7999999999988 8999999999999997669999
Q ss_pred EEecCcchhHHHHHHHHHhhC-CCcEEEEEeCCCCcccc----CCCC-----ccccccccCCCCCcc---cccccCcCeE
Q 027277 81 IAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVIPP---VLDVAMLDEV 147 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k~~~-~~~~vigVe~~~~~~~~----~~~~-----~~~~~~gl~~~~~~~---~~~~~~~~~~ 147 (225)
|+|+|+|||++|++.+||+++ |.+||++|||++++++. .++. ..+.+++++.+..+. .+.+.+.++.
T Consensus 160 vvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~ 239 (318)
T 2rkb_A 160 VLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQVCKIHS 239 (318)
T ss_dssp EEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCCHHHHHHHHHSCEEE
T ss_pred EEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHHHHHHHcCCcccCCCCCceecccCCCCCCHHHHHHHHHcCCEE
Confidence 999999999999999999986 78999999999987653 2221 134457777654432 2335677889
Q ss_pred EEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHH-----HhhcCC--CCCCEEEEEecCCCCCCcCh
Q 027277 148 ITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIR-----VAKRPE--NAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 148 ~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~-----~~~~~~--~~~~~vv~v~~~gG~~~~~~ 209 (225)
+.|+|+|++++++.|++++|+++||+||++++|+++ +.+++. .++++||+++|+|++.+++.
T Consensus 240 ~~v~d~e~~~a~~~l~~~~gi~~eps~a~a~aa~~~~~~~~~~~~g~~~~~~~~vv~i~tgg~~~~~~~ 308 (318)
T 2rkb_A 240 EVVEDTEAVSAVQQLLDDERMLVEPACGAALAAIYSGLLRRLQAEGCLPPSLTSVVVIVCGGNNINSRE 308 (318)
T ss_dssp EEECHHHHHHHHHHHHHHHCBCCCHHHHHHHHHHHTSHHHHHHHTTSSCSSCSCEEEEECBCSSCCHHH
T ss_pred EEECHHHHHHHHHHHHHhcCcEEchhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHHH
Confidence 999999999999999999999999999999999873 323331 35788988884444488875
No 24
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=1e-37 Score=266.77 Aligned_cols=205 Identities=20% Similarity=0.195 Sum_probs=173.3
Q ss_pred CCCC-ChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 1 MPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 1 vP~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
||++ +|+.|+++|+.|||+|+.+++ +++++.+.++++++++ +++|+++ +||.+ +.||.|++.||++|++..||+
T Consensus 109 ~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~ 183 (352)
T 2zsj_A 109 LPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALNIVRKIGENF-PVEIVNS-VNPYR-IEGQKTAAFEICDTLGEAPDY 183 (352)
T ss_dssp EEGGGCCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHHS-SEEECST-TCTHH-HHHHTHHHHHHHHHHSSCCSE
T ss_pred ECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CcEECCC-CCcch-hhhHhHHHHHHHHHcCCCCCE
Confidence 5787 999999999999999999995 5889999999999887 5888988 78887 899999999999999766999
Q ss_pred EEEecCcchhHHHHHHHHHhhCC------CcEEEEEeCCCCccccCCCC---ccccccccCCCCCc-cc----ccccCcC
Q 027277 80 FIAGIGTGGTVTGAGRFLKEKNP------NIKVYGIEPSESAVLNGGQP---GKHLIQGIGAGVIP-PV----LDVAMLD 145 (225)
Q Consensus 80 iv~~~G~Gg~~aGi~~~~k~~~~------~~~vigVe~~~~~~~~~~~~---~~~~~~gl~~~~~~-~~----~~~~~~~ 145 (225)
||+|+|+|||++|++.+||+.++ .+||++|||.+++++..+++ ..+.+++++.+... +. +.+++.+
T Consensus 184 vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~ 263 (352)
T 2zsj_A 184 HFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYSWKSALKAAQESGG 263 (352)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTC
T ss_pred EEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCcHHHHHHHHHHhCC
Confidence 99999999999999999998753 68999999999877654432 12445777655321 11 2356788
Q ss_pred eEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCC-CCCCEEEEEecCCCCCCcChh
Q 027277 146 EVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPE-NAGKLIVVIFPSAGERYLSTA 210 (225)
Q Consensus 146 ~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~-~~~~~vv~v~~~gG~~~~~~~ 210 (225)
+.+.|+|+|++++++.|++++|+++||+||++++|++++++++. .++++||+++|++|.||++++
T Consensus 264 ~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 329 (352)
T 2zsj_A 264 KIDAVSDSEILYAYKLIASTEGVFCEPASAASVAGLIKLVREGFFKGGEVVTCTLTGNGLKDPDTA 329 (352)
T ss_dssp EEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTTCCCSCCEEEEEECBBGGGCHHHH
T ss_pred eEEEECHHHHHHHHHHHHHhCCeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCccChHHH
Confidence 99999999999999999999999999999999999999987643 357889999977777999973
No 25
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-37 Score=267.40 Aligned_cols=206 Identities=19% Similarity=0.220 Sum_probs=173.7
Q ss_pred CCCC-ChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 1 MPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 1 vP~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
||++ +|+.|+++|+.|||+|+.+++ +++++.+.+++++++.++.+++++ +|+.+ +.||.|++.||++|++..||+
T Consensus 115 ~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~~~~~~i~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~ 190 (360)
T 2d1f_A 115 IPQGKIAMGKLAQAVMHGAKIIQIDG--NFDDCLELARKMAADFPTISLVNS-VNPVR-IEGQKTAAFEIVDVLGTAPDV 190 (360)
T ss_dssp ECSSCCCHHHHHHHHHTTCEEEEBSS--CHHHHHHHHHHHHHHCTTEEECST-TCHHH-HHHHTHHHHHHHHHHSSCCSE
T ss_pred EcCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhcCCeEEcCC-CChhh-hhhHHHHHHHHHHHcCCCCCE
Confidence 6888 999999999999999999995 588999999999988755888888 78887 789999999999999766999
Q ss_pred EEEecCcchhHHHHHHHHHhhCC------CcEEEEEeCCCCccccCCCCc---cccccccCCCCCc-c----cccccCcC
Q 027277 80 FIAGIGTGGTVTGAGRFLKEKNP------NIKVYGIEPSESAVLNGGQPG---KHLIQGIGAGVIP-P----VLDVAMLD 145 (225)
Q Consensus 80 iv~~~G~Gg~~aGi~~~~k~~~~------~~~vigVe~~~~~~~~~~~~~---~~~~~gl~~~~~~-~----~~~~~~~~ 145 (225)
||+|+|+|||++|++.+||+.++ .+||++|||++++++..+++. .+.+++++.+... + .+.+++.+
T Consensus 191 vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 2d1f_A 191 HALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPETIATAIRIGSPASWTSAVEAQQQSKG 270 (360)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTC
T ss_pred EEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhcCCccCCccchHHHhCCCCCCcHHHHHHHHHHhCC
Confidence 99999999999999999998753 689999999998877544431 2345777655421 1 12356788
Q ss_pred eEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCC-CCCCEEEEEecCCCCCCcChh
Q 027277 146 EVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPE-NAGKLIVVIFPSAGERYLSTA 210 (225)
Q Consensus 146 ~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~-~~~~~vv~v~~~gG~~~~~~~ 210 (225)
+.+.|+|+|+++++++|++++|+++||+||++++|++++.+++. .++++||+++|++|.||++++
T Consensus 271 ~~~~V~d~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 336 (360)
T 2d1f_A 271 RFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWVARGSTVVCTVTGNGLKDPDTA 336 (360)
T ss_dssp EEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHTSSCTTCEEEEEECBBGGGCHHHH
T ss_pred eEEEECHHHHHHHHHHHHHhcCeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcCCHHHH
Confidence 99999999999999999999999999999999999999887543 367889999977777999973
No 26
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=1.2e-37 Score=266.37 Aligned_cols=205 Identities=18% Similarity=0.199 Sum_probs=173.3
Q ss_pred CCCC-ChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 1 MPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 1 vP~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
||++ +|+.|+++|+.|||+|+.+++ +++++.+.+++++++. +++|+++ +||.+ +.||.|++.||++|++..||+
T Consensus 107 ~p~~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~ 181 (351)
T 3aey_A 107 LPAGYVALGKVAQSLVHGARIVQVEG--NFDDALRLTQKLTEAF-PVALVNS-VNPHR-LEGQKTLAFEVVDELGDAPHY 181 (351)
T ss_dssp EETTCSCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-SEEECST-TCHHH-HHHHHHHHHHHHHHHSSCCSE
T ss_pred ECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCC-CCccc-eeeeeeHHHHHHHHcCCCCCE
Confidence 5887 999999999999999999985 5889999999998887 5888988 78887 789999999999999766999
Q ss_pred EEEecCcchhHHHHHHHHHhhCC------CcEEEEEeCCCCccccCCCCc---cccccccCCCCCc-cc----ccccCcC
Q 027277 80 FIAGIGTGGTVTGAGRFLKEKNP------NIKVYGIEPSESAVLNGGQPG---KHLIQGIGAGVIP-PV----LDVAMLD 145 (225)
Q Consensus 80 iv~~~G~Gg~~aGi~~~~k~~~~------~~~vigVe~~~~~~~~~~~~~---~~~~~gl~~~~~~-~~----~~~~~~~ 145 (225)
||+|+|+|||++|++.+||+.++ .+||++|||.+++++..+++. .+.+++++.+... +. +.+++.+
T Consensus 182 vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~ 261 (351)
T 3aey_A 182 HALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPASWQGAVRAKEESGG 261 (351)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTC
T ss_pred EEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhhcCcccCCccchhHhhcCCCCCCHHHHHHHHHHhCC
Confidence 99999999999999999998753 699999999998776544431 2445777655321 11 2356788
Q ss_pred eEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCC-CCCCEEEEEecCCCCCCcChh
Q 027277 146 EVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPE-NAGKLIVVIFPSAGERYLSTA 210 (225)
Q Consensus 146 ~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~-~~~~~vv~v~~~gG~~~~~~~ 210 (225)
+.+.|+|+|+++++++|++++|+++||+||++++|++++.+++. .++++||+++|++|.||++++
T Consensus 262 ~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 327 (351)
T 3aey_A 262 VIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRLEPESTVVLTLTGHGLKDPATA 327 (351)
T ss_dssp EEEEECHHHHHHHHHHHHHHTCCCBCHHHHHHHHHHHHHHHTTCSCTTCEEEEEECBBGGGCHHHH
T ss_pred eEEEECHHHHHHHHHHHHHhCCEEECchHHHHHHHHHHHHHhcCCCCCCeEEEEECCCCCCCHHHH
Confidence 99999999999999999999999999999999999999987643 367889999977777999873
No 27
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=3.6e-38 Score=266.93 Aligned_cols=205 Identities=20% Similarity=0.196 Sum_probs=167.2
Q ss_pred CCCCC-hHHHHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHHHhCCC-eEEeCCCCCCCChHhhHhhhHHHHHHhhCC
Q 027277 1 MPSTY-SIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPN-GYILGQFENPANPEIHYETTGPEIWNDSGG 75 (225)
Q Consensus 1 vP~~~-~~~k~~~~~~~GA~v~~~~~~~~~---~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~ 75 (225)
||+++ ++.|+++++.|||+|++++...+. +++.+.+++++++.+. +++..++.|+.+ ..||.|++.||++|++.
T Consensus 102 ~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~-~~g~~t~~~Ei~~q~~~ 180 (325)
T 1j0a_A 102 LRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIG-TLGYVRAVGEIATQSEV 180 (325)
T ss_dssp EESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHH-HTHHHHHHHHHHHHCCC
T ss_pred ECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHH-HHHHHHHHHHHHHhhCC
Confidence 68888 999999999999999999964332 2567888888887644 334456678877 67899999999999966
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCC---ccccccccC-CCCCcccccccCcCeEEEeC
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQP---GKHLIQGIG-AGVIPPVLDVAMLDEVITVS 151 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~---~~~~~~gl~-~~~~~~~~~~~~~~~~~~v~ 151 (225)
.||+||+|+|+|||++|++.+||++++++|||||||.+++.+..... .+....+++ .+..++.+.++++|+ +.|+
T Consensus 181 ~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~-~~v~ 259 (325)
T 1j0a_A 181 KFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGE-YGKI 259 (325)
T ss_dssp CCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSSHHHHHHHHHHHHHHHTTCCCCSCCEEEECSTTS-TTCC
T ss_pred CCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHhcCCCCCCCcEEecCcccC-CCCC
Confidence 79999999999999999999999999999999999999976642210 112223344 334567788899999 9999
Q ss_pred HHHHHHHHHHHHHhcCCeecc-hHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 152 SEEAIETSKLLALKEGLLVGI-SSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 152 d~e~~~a~~~l~~~eGi~~ep-ssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
|+|++++++.|++++||++|| |||++++++++++++... +++||+++ |||+..+..
T Consensus 260 d~e~~~a~~~l~~~~gi~~ep~ssa~a~aa~~~~~~~~~~-~~~Vv~i~-tGG~~~~~~ 316 (325)
T 1j0a_A 260 TGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL-GEKILFIH-TGGISGTFH 316 (325)
T ss_dssp CHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCS-CSEEEEEE-CCCHHHHHH
T ss_pred CHHHHHHHHHHHHhhCcccccchHHHHHHHHHHHHHcCCC-CCcEEEEE-CCCchhhhc
Confidence 999999999999999999999 699999999999877544 77888777 899866553
No 28
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=3.2e-37 Score=267.63 Aligned_cols=210 Identities=17% Similarity=0.221 Sum_probs=171.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCC-----CC-CCCChHhhHhhhHHHHHHhhC
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQ-----FE-NPANPEIHYETTGPEIWNDSG 74 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~-~~~~~~~g~~t~~~Ei~~Ql~ 74 (225)
||+++|+.|+++++.|||+|+++++ +++++.+.+++++++. +++|++| |+ |+.+.++||.|++.||++|++
T Consensus 142 ~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~ 218 (398)
T 4d9i_A 142 MPKGSAQERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMR 218 (398)
T ss_dssp ECTTCCHHHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEecCcccCCcCCCCchhhhhHHHHHHHHHHHhh
Confidence 7999999999999999999999995 6899999999998887 7899986 65 344568999999999999996
Q ss_pred CC---ccEEEEecCcchhHHHHHHHHHhh--CCCcEEEEEeCCCCcccc----CCCCc------cccccccCCCCC---c
Q 027277 75 GK---VDAFIAGIGTGGTVTGAGRFLKEK--NPNIKVYGIEPSESAVLN----GGQPG------KHLIQGIGAGVI---P 136 (225)
Q Consensus 75 ~~---~d~iv~~~G~Gg~~aGi~~~~k~~--~~~~~vigVe~~~~~~~~----~~~~~------~~~~~gl~~~~~---~ 136 (225)
+. ||+||+|+|+|||++|++.+||++ .+.++||+|||++++++. .+++. .+..++++.+.. .
T Consensus 219 ~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~p~~~~ 298 (398)
T 4d9i_A 219 EMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLG 298 (398)
T ss_dssp HTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHHHHHHHTSCCCC------CCTTCCCSSCCHHH
T ss_pred hcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCCceeccccCCCCCHHH
Confidence 44 999999999999999999999876 478999999999998764 23322 233456654332 2
Q ss_pred ccccccCcCeEEEeCHHHHHHHHHHHHHhcC----CeecchHHHHHHHHHHHh---------hcCC-CCCCEEEEEecCC
Q 027277 137 PVLDVAMLDEVITVSSEEAIETSKLLALKEG----LLVGISSGAAAAAAIRVA---------KRPE-NAGKLIVVIFPSA 202 (225)
Q Consensus 137 ~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eG----i~~epssgaalaa~~~~~---------~~~~-~~~~~vv~v~~~g 202 (225)
+.+.++++++.+.|+|+|++++++.|+++|| |++||+||++++|+++++ +++. .++++||+++ ||
T Consensus 299 ~~~~~~~~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~~~~~~~~~~~~l~~~~~~~~~~~Vv~i~-tG 377 (398)
T 4d9i_A 299 WEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVIS-TE 377 (398)
T ss_dssp HHHHHHHCCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHHHHHHHSTTHHHHHHHTTCCTTCEEEEEE-CB
T ss_pred HHHHHHcCCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHHHHhhhhhhhHHHHHhcCCCCCCEEEEEe-CC
Confidence 3344788999999999999999999999999 999999999999999884 3333 3577888888 79
Q ss_pred CCCCcChhhchhHH
Q 027277 203 GERYLSTALFESIR 216 (225)
Q Consensus 203 G~~~~~~~~~~~~~ 216 (225)
|+++++. |.+..
T Consensus 378 G~~d~~~--~~~~~ 389 (398)
T 4d9i_A 378 GDTDVKH--YREVV 389 (398)
T ss_dssp CCSSHHH--HHHHH
T ss_pred CCCCHHH--HHHHH
Confidence 9999885 44433
No 29
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=8.8e-38 Score=266.17 Aligned_cols=207 Identities=19% Similarity=0.161 Sum_probs=168.1
Q ss_pred CCCCCh-----HH------HHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHHHhCCC-eEEeCC-CCCCCChHhhHhh
Q 027277 1 MPSTYS-----IE------RRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPN-GYILGQ-FENPANPEIHYET 64 (225)
Q Consensus 1 vP~~~~-----~~------k~~~~~~~GA~v~~~~~~~~~---~~~~~~a~~~~~~~~~-~~~~~~-~~~~~~~~~g~~t 64 (225)
||++++ +. |+++++.|||+|++++...+. +++.+.+++++++.+. +++++| |+||.+ +.||.|
T Consensus 99 ~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~i~~~~~~np~~-~~G~~t 177 (341)
T 1f2d_A 99 QEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYG-GLGFVG 177 (341)
T ss_dssp EECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEEECGGGTTSTTT-TTHHHH
T ss_pred eccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcEEEeCCCcCCCCcc-HHHHHH
Confidence 567776 44 999999999999999964322 3577788888887643 445578 999998 789999
Q ss_pred hHHHHHHhhC---CCccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCC---ccccccccCCCC--Cc
Q 027277 65 TGPEIWNDSG---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQP---GKHLIQGIGAGV--IP 136 (225)
Q Consensus 65 ~~~Ei~~Ql~---~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~---~~~~~~gl~~~~--~~ 136 (225)
++.||++|++ ..||+||+|+|+|||++|++.+||++++++||++|||.+++++..... ..+.+++++.+. ..
T Consensus 178 ~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~ 257 (341)
T 1f2d_A 178 FADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQTLRIANNTAKLIGVEHEFKD 257 (341)
T ss_dssp HHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHHHHHHHHHHHHHHHHHTCCCCCSC
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHHcCCCCCcCe
Confidence 9999999995 479999999999999999999999999999999999999976642211 123345565332 34
Q ss_pred ccccccCcCeEEEeCHHHHHHHHHHHHHhcCCeecc-hHHHHHHHHHHHhhcCCC-CCCEEEEEecCCCCCCcCh
Q 027277 137 PVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGI-SSGAAAAAAIRVAKRPEN-AGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 137 ~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~ep-ssgaalaa~~~~~~~~~~-~~~~vv~v~~~gG~~~~~~ 209 (225)
+.+.++++++.+.|+|+|+++++++|++++||++|| |||+++++++++++++.. ++++||+++ |||+..+..
T Consensus 258 ~~~~~~~~~~~~~v~d~e~~~a~~~l~~~egi~~ep~~sa~alaa~~~~~~~~~~~~~~~Vv~i~-tGG~~~~~~ 331 (341)
T 1f2d_A 258 FTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIKEDYFKPGANVLYVH-LGGAPALSA 331 (341)
T ss_dssp CCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEE-CCCGGGGGG
T ss_pred EEEecCcccceEecCCHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHhCCCCCCCeEEEEE-CCchHHhhh
Confidence 467788999999999999999999999999999999 699999999999877543 567777776 999977764
No 30
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=1.6e-36 Score=261.64 Aligned_cols=199 Identities=24% Similarity=0.314 Sum_probs=167.5
Q ss_pred CCCCChHHHHHHHHHcCCEEE-EeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhC---CC
Q 027277 1 MPSTYSIERRIILRALGAEVY-LADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG---GK 76 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~---~~ 76 (225)
||+++++.|+.+|+.+||+|+ .++. .+++++.+.+++++++. +++|++||+||.++++||+|++.||++|+. ..
T Consensus 175 mp~~~~~~k~~~~~~~GAeVv~~v~~-~~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~~g~~ 252 (389)
T 1wkv_A 175 LPGAAEEFGKLLPRLLGAQVIVDPEA-PSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLA 252 (389)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEETTC-SSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHHTTCC
T ss_pred ECCCCCHHHHHHHHHcCCEEEEEcCC-CCHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 688899999999999999999 7773 36788888999888775 789999999998889999999999999994 36
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCccccccccCCCCCcccccccCcC-eEEEeCHHHH
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD-EVITVSSEEA 155 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~-~~~~v~d~e~ 155 (225)
||+||+|+|+|||++|++.+||+.+|.+|||||||.++..+.. .+.+.+ .+..+....++ +.+.|+|+|+
T Consensus 253 ~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~G----i~~i~~-----~~~~~~~~~~dg~~~~Vsd~ea 323 (389)
T 1wkv_A 253 LRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG----IRRVET-----GMLWINMLDISYTLAEVTLEEA 323 (389)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTT----CCCGGG-----CCSHHHHSCCCCEEEEECHHHH
T ss_pred CCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCcccc----ccccCC-----cchhhhhheeccEEEEECHHHH
Confidence 9999999999999999999999999999999999998865531 111111 11122334556 8999999999
Q ss_pred HHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChh
Q 027277 156 IETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTA 210 (225)
Q Consensus 156 ~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~ 210 (225)
+++++.|+++|||+++|+||+++++++++++++..+++++|+++|++|+||++++
T Consensus 324 ~~a~~~l~~~eGi~~~pssa~alaa~~~l~~~g~~~~~~vVviltg~G~k~~~~~ 378 (389)
T 1wkv_A 324 MEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLV 378 (389)
T ss_dssp HHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHHH
T ss_pred HHHHHHHHHHcCCeEChHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCccCHHHH
Confidence 9999999999999999999999999999987754445668889989999999973
No 31
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=9.3e-37 Score=267.53 Aligned_cols=211 Identities=18% Similarity=0.177 Sum_probs=173.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-----
Q 027277 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG----- 75 (225)
Q Consensus 1 vP~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~----- 75 (225)
||+++|+.|+++++.|||+|+.+++ +++++.+.+++++++.+++|+++++ |+.++++||+|++.||++|++.
T Consensus 190 mp~~~~~~k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~v 266 (442)
T 3ss7_X 190 MSADARAWKKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDPNCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIV 266 (442)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCTTEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCCCceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 7999999999999999999999994 6899999999999887668999985 4555689999999999999842
Q ss_pred ---CccEEEEecCcchhHHHHHHHHHhh-CCCcEEEEEeCCCCcccc----CCCC-----------ccccccccCCCCC-
Q 027277 76 ---KVDAFIAGIGTGGTVTGAGRFLKEK-NPNIKVYGIEPSESAVLN----GGQP-----------GKHLIQGIGAGVI- 135 (225)
Q Consensus 76 ---~~d~iv~~~G~Gg~~aGi~~~~k~~-~~~~~vigVe~~~~~~~~----~~~~-----------~~~~~~gl~~~~~- 135 (225)
.||+||+|+|+||+++|++.+||++ +++++|++|||.+++++. .+.. ..+.++||+.+..
T Consensus 267 D~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~ 346 (442)
T 3ss7_X 267 DADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRAS 346 (442)
T ss_dssp BTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTCCHHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCC
T ss_pred cccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCchHHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCc
Confidence 3679999999999999999999987 899999999999998653 1221 2344567765432
Q ss_pred --cccccccCcCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcC------CC-----CCCEEEEEecCC
Q 027277 136 --PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRP------EN-----AGKLIVVIFPSA 202 (225)
Q Consensus 136 --~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~------~~-----~~~~vv~v~~~g 202 (225)
.+.+.++++++.+.|+|+|++++++.|+++|||++||+||++++|++++++.. .. ++++||+++|+|
T Consensus 347 ~~~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssaaalAa~~~l~~~~~~~~~~~l~~~~~~~~~vv~i~TGG 426 (442)
T 3ss7_X 347 GFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGG 426 (442)
T ss_dssp SSHHHHHGGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGGGGGGHHHHHHHCHHHHHHHTCCHHHHHTCEEEEEECBC
T ss_pred hhHHHHHHhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHHHHHHHHHHHHhchhhHHhcCCCcccCCCCeEEEEECCC
Confidence 23455688999999999999999999999999999999999999999987631 11 167899999777
Q ss_pred CCCCcChhhchhHH
Q 027277 203 GERYLSTALFESIR 216 (225)
Q Consensus 203 G~~~~~~~~~~~~~ 216 (225)
|+++.+. +.++.
T Consensus 427 ~~~~~~~--~~~~~ 438 (442)
T 3ss7_X 427 GMVPEEE--MNQYL 438 (442)
T ss_dssp TTCCHHH--HHHHH
T ss_pred CCCCHHH--HHHHH
Confidence 7776663 55544
No 32
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=6.3e-37 Score=260.89 Aligned_cols=206 Identities=17% Similarity=0.188 Sum_probs=165.6
Q ss_pred CCCCChH--------HHHHHHHHcCCEEEEeCCCCChHHHH-HHHHHHHHhCCCeEEeCCC--CCCCChHhhHhhhHHHH
Q 027277 1 MPSTYSI--------ERRIILRALGAEVYLADPAVGFEGFV-KKGEEILNRTPNGYILGQF--ENPANPEIHYETTGPEI 69 (225)
Q Consensus 1 vP~~~~~--------~k~~~~~~~GA~v~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~--~~~~~~~~g~~t~~~Ei 69 (225)
||+++|+ .|+++++.|||+|+++++..+++++. +.++++.++. +..|+.++ .|+.+ ..||.|++.||
T Consensus 113 ~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~p~~~~n~~~-~~G~~t~~~EI 190 (342)
T 4d9b_A 113 LENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQG-FRPYVIPVGGSSALG-AMGYVESALEI 190 (342)
T ss_dssp EECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTT-CCEEECCGGGCSHHH-HHHHHHHHHHH
T ss_pred EeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcC-CceEEeCCCCCChHH-HHHHHHHHHHH
Confidence 5666663 59999999999999998754555555 4566666665 44444444 45555 56999999999
Q ss_pred HHhhC--CCccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCC---ccccccccCC-CCCcccccccC
Q 027277 70 WNDSG--GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQP---GKHLIQGIGA-GVIPPVLDVAM 143 (225)
Q Consensus 70 ~~Ql~--~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~---~~~~~~gl~~-~~~~~~~~~~~ 143 (225)
++|++ ..||+||+|+|+|||++|++.+||++++++|||||||++++.+..... ..+.+++|+. +..++.+.+++
T Consensus 191 ~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~t~a~gl~~~~~~~~~~~~~~ 270 (342)
T 4d9b_A 191 AQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQAIAGQLALTATADIHLWDDY 270 (342)
T ss_dssp HHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHHHHHHHTTCCCCCCCEEECTT
T ss_pred HHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHHHHHHHcCCCCccceEEEecC
Confidence 99996 479999999999999999999999999999999999999976542211 1234567766 55677788899
Q ss_pred cCeEEEeCHHHHHHHHHHHHHhcCCeecch-HHHHHHHHHHHhhcCCC-CCCEEEEEecCCCCCCcCh
Q 027277 144 LDEVITVSSEEAIETSKLLALKEGLLVGIS-SGAAAAAAIRVAKRPEN-AGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 144 ~~~~~~v~d~e~~~a~~~l~~~eGi~~eps-sgaalaa~~~~~~~~~~-~~~~vv~v~~~gG~~~~~~ 209 (225)
+|+.+.|+|+|+++++++|++++||++||+ ||++++|++++++++.. ++++||+|+ ||||.++..
T Consensus 271 ~d~~~~V~d~e~~~a~~~l~~~~gi~~epsYsa~a~aa~~~~~~~~~~~~~~~Vv~i~-tGGn~~~~~ 337 (342)
T 4d9b_A 271 FAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDGPILFIH-TGGAPALFA 337 (342)
T ss_dssp STTCTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHHTCSSSSSCEEEEE-CCCTTHHHH
T ss_pred CCceEecCCHHHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHcCCCCCCCeEEEEE-CCCccchhh
Confidence 999999999999999999999999999996 99999999999876543 677888887 999966653
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=4.8e-36 Score=255.14 Aligned_cols=206 Identities=18% Similarity=0.214 Sum_probs=161.4
Q ss_pred CCCCChHH--------HHHHHHHcCCEEEEeCCCCChH---HHHHHHHHHHHhCCCeEEe-CC-CCCCCChHhhHhhhHH
Q 027277 1 MPSTYSIE--------RRIILRALGAEVYLADPAVGFE---GFVKKGEEILNRTPNGYIL-GQ-FENPANPEIHYETTGP 67 (225)
Q Consensus 1 vP~~~~~~--------k~~~~~~~GA~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~-~~-~~~~~~~~~g~~t~~~ 67 (225)
||+++|+. |+++++.|||+|+++++..+.. .+.+.+++++++.+..|++ ++ |+||.+ +.||.|++.
T Consensus 99 ~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~~n~~~-~~g~~t~~~ 177 (338)
T 1tzj_A 99 QENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLG-GLGFVGFAE 177 (338)
T ss_dssp EECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEECCGGGTSSTTT-TTHHHHHHH
T ss_pred ecCCCCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEEeCCCcCCCccc-HHHHHHHHH
Confidence 56777665 9999999999999998632111 2467778887776444443 45 899998 789999999
Q ss_pred HHHHhhC---CCccEEEEecCcchhHHHHHHHHHhh-CCCcEEEEEeCCCCccccCCCC---ccccccccCCCC----Cc
Q 027277 68 EIWNDSG---GKVDAFIAGIGTGGTVTGAGRFLKEK-NPNIKVYGIEPSESAVLNGGQP---GKHLIQGIGAGV----IP 136 (225)
Q Consensus 68 Ei~~Ql~---~~~d~iv~~~G~Gg~~aGi~~~~k~~-~~~~~vigVe~~~~~~~~~~~~---~~~~~~gl~~~~----~~ 136 (225)
||++|++ ..||+||+|+|+|||++|++.+||++ +++ |||+|||.+++.+..... .++..++++.+. ..
T Consensus 178 Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 256 (338)
T 1tzj_A 178 EVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQTREQITRIARQTAEKVGLERDIMRAD 256 (338)
T ss_dssp HHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHHHHHHHHHHHHHHHHHTCSSCCCGGG
T ss_pred HHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHHHHHHHHHHHHHHHHcCCCCCCCccc
Confidence 9999995 46999999999999999999999998 788 999999999876542111 122234444221 23
Q ss_pred ccccccCcCeEEEeCHHHHHHHHHHHHHhcCCeecc-hHHHHHHHHHHHhhcCCC-CCCEEEEEecCCCCCCcCh
Q 027277 137 PVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGI-SSGAAAAAAIRVAKRPEN-AGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 137 ~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~ep-ssgaalaa~~~~~~~~~~-~~~~vv~v~~~gG~~~~~~ 209 (225)
+.+.++++++.+.|+|+|+++++++|++++||++|| |||++++|+++++++... ++++||+++ |||++|++.
T Consensus 257 ~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~ysa~alaa~~~~~~~~~~~~~~~Vv~i~-tGG~~~~~~ 330 (338)
T 1tzj_A 257 VVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMVRNGEFPEGSRVLYAH-LGGVPALNG 330 (338)
T ss_dssp CEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEE-CCCGGGGGG
T ss_pred EEEecCcccceeecCCHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHHcCCCCCCCeEEEEE-CCCcccccc
Confidence 345678899999999999999999999999999999 599999999999876543 577787776 899999986
No 34
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=2.4e-33 Score=248.31 Aligned_cols=203 Identities=20% Similarity=0.201 Sum_probs=161.1
Q ss_pred CCCC-ChHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-Ccc
Q 027277 1 MPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG-KVD 78 (225)
Q Consensus 1 vP~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~-~~d 78 (225)
||++ +|+.|+.+|+.+||+|+.+++ +++++.+.+++++++. ++++++++ |+.+ +.||.|+++||++|+++ .||
T Consensus 214 ~P~~~~s~~k~~~~~~~GA~vi~v~g--~~dd~~~~a~~l~~~~-~~~~vns~-N~~~-i~gq~t~~~Ei~~ql~~~~~D 288 (486)
T 1e5x_A 214 LPANKISMAQLVQPIANGAFVLSIDT--DFDGCMKLIREITAEL-PIYLANSL-NSLR-LEGQKTAAIEILQQFDWQVPD 288 (486)
T ss_dssp EEGGGCCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-CEEEGGGS-HHHH-HHHHTHHHHHHHHHTTSCCCS
T ss_pred ECCCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHhcC-CEEEeCCC-CHHH-HHHHHHHHHHHHHHcCCCCCC
Confidence 5786 999999999999999999995 5899999999998886 78889887 7887 88999999999999965 499
Q ss_pred EEEEecCcchhHHHHHHHHHhhC------CCcEEEEEeCCCCcccc----CCC----C---ccccccccCCCCCccccc-
Q 027277 79 AFIAGIGTGGTVTGAGRFLKEKN------PNIKVYGIEPSESAVLN----GGQ----P---GKHLIQGIGAGVIPPVLD- 140 (225)
Q Consensus 79 ~iv~~~G~Gg~~aGi~~~~k~~~------~~~~vigVe~~~~~~~~----~~~----~---~~~~~~gl~~~~~~~~~~- 140 (225)
+||+|+|+||+++|++.+||++. +.+||++|||++++++. .++ + ..+.+++|+.+. |..+.
T Consensus 289 ~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~gi~i~~-p~~~~~ 367 (486)
T 1e5x_A 289 WVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGD-PVSIDR 367 (486)
T ss_dssp EEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC-----------------CCCHH
T ss_pred EEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCccccCCC-CccHHH
Confidence 99999999999999999998864 78999999999887653 231 1 235567776542 22211
Q ss_pred -----ccCcCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCC-CCCCEEEEEecCCCCCCcChh
Q 027277 141 -----VAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPE-NAGKLIVVIFPSAGERYLSTA 210 (225)
Q Consensus 141 -----~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~-~~~~~vv~v~~~gG~~~~~~~ 210 (225)
.++.+..+.|+|+|++++++ +++++|+++||+||++++|++++.+++. .+++++|+++|++|.||++.+
T Consensus 368 ~~~~~~~~~g~~~~Vsd~e~~~ai~-l~~~eGi~~ePssA~alaa~~~~~~~g~~~~~~~vV~i~Tg~~~k~~~~v 442 (486)
T 1e5x_A 368 AVYALKKCNGIVEEATEEELMDAMA-QADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQSK 442 (486)
T ss_dssp HHHHHHHTTCEEEEECHHHHHHHHH-HHHHTTCCCCHHHHHHHHHHHHHHHTTSSCTTCCEEEEECBCGGGGHHHH
T ss_pred HHHHHhccCCeEEEECHHHHHHHHH-HHHHCCeEEChhHHHHHHHHHHHHHhcCCCCCCeEEEEeCCCCccCHHHH
Confidence 22333489999999999999 6788999999999999999999987653 357889999989999999873
No 35
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=4.3e-33 Score=242.95 Aligned_cols=201 Identities=21% Similarity=0.274 Sum_probs=150.9
Q ss_pred HHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEEe-CCCCCCC----ChHhhHhhhHHHHHHhhC----CC
Q 027277 8 ERRIILRALGAEVYLADP-AVGFEGFVKKGEE-ILNRTPNGYIL-GQFENPA----NPEIHYETTGPEIWNDSG----GK 76 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~----~~~~g~~t~~~Ei~~Ql~----~~ 76 (225)
.|+.+|+.|||+|+.++. ..+++++.+.+.+ ++++.++.+|+ +++.|+. ++.+||+|++.||++|+. ..
T Consensus 166 ~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~~~Ei~~Ql~~~~~~~ 245 (418)
T 1x1q_A 166 LNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRL 245 (418)
T ss_dssp HHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 688899999999999984 3468888887755 45554455554 5544332 213599999999999983 35
Q ss_pred ccEEEEecCcchhHHHHHHHHHhh-CCCcEEEEEeCCCCcc--------ccCCCC--------------------ccccc
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEK-NPNIKVYGIEPSESAV--------LNGGQP--------------------GKHLI 127 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~-~~~~~vigVe~~~~~~--------~~~~~~--------------------~~~~~ 127 (225)
||+||+|+|+||+++|++.+||++ +|.+|||||||.++.. +..+.+ ..+..
T Consensus 246 ~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g~~~~~~~~~~g~~~~~~tia 325 (418)
T 1x1q_A 246 PDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSVS 325 (418)
T ss_dssp CSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEEEEBCCC------------
T ss_pred CCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcccccHHHHHHHHcCCeeeeccccccccccccccccCCceee
Confidence 999999999999999999999987 8899999999999732 111221 11233
Q ss_pred cccCCCCC---cccccccCcCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCC
Q 027277 128 QGIGAGVI---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGE 204 (225)
Q Consensus 128 ~gl~~~~~---~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~ 204 (225)
+||..+.. .+.+.+..+++.+.|+|+|++++++.|+++|||+++|+||+++++++++.++. .++++||+++|++|+
T Consensus 326 ~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~~~~~~-~~~~~Vv~vlsG~g~ 404 (418)
T 1x1q_A 326 AGLDYPGVGPEHSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKVVPEM-DKDQVVVINLSGRGD 404 (418)
T ss_dssp ----CSBCCHHHHHHHHHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHTTTS-CTTCEEEEEECBBGG
T ss_pred eccCCCCCCHHHHHHHhccCeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHhc-CCCCeEEEEECCCCC
Confidence 55543221 12234556789999999999999999999999999999999999999987653 367899999977799
Q ss_pred CCcCh
Q 027277 205 RYLST 209 (225)
Q Consensus 205 ~~~~~ 209 (225)
||+++
T Consensus 405 kd~~~ 409 (418)
T 1x1q_A 405 KDVTE 409 (418)
T ss_dssp GTHHH
T ss_pred CCHHH
Confidence 99986
No 36
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=99.98 E-value=4.6e-32 Score=234.58 Aligned_cols=201 Identities=20% Similarity=0.278 Sum_probs=154.4
Q ss_pred HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEE-eCCCCCCCC----hHhhHhhhHHHHHHhh----CC
Q 027277 7 IERRIILRALGAEVYLADP-AVGFEGFVKKGEE-ILNRTPNGYI-LGQFENPAN----PEIHYETTGPEIWNDS----GG 75 (225)
Q Consensus 7 ~~k~~~~~~~GA~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~~----~~~g~~t~~~Ei~~Ql----~~ 75 (225)
+.|+++|+.|||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.. +.+||+|++.||++|+ +.
T Consensus 138 ~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~~Ei~~q~~~~~~~ 217 (388)
T 1v8z_A 138 KMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQ 217 (388)
T ss_dssp HHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHHHHHHHHHHHhcCC
Confidence 3568999999999999985 3468888887754 5666545444 566655432 2349999999999999 44
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccc--------cCCCC--------------------ccccc
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVL--------NGGQP--------------------GKHLI 127 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~--------~~~~~--------------------~~~~~ 127 (225)
.||+||+|+|+|||++|++.+++. +|.+|||+|||+++... ..++. ..+..
T Consensus 218 ~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~vigve~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~tia 296 (388)
T 1v8z_A 218 LPDVIVACVGGGSNAMGIFYPFVN-DKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIA 296 (388)
T ss_dssp CCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSS
T ss_pred CCCEEEEecCccHhHHHHHHHHhh-CCCceEEEEccCccccchhhhhHHHhcCCceeccccccccccccccccCCCceee
Confidence 599999999999999999999884 88999999999986421 11211 11223
Q ss_pred cccCCCCC---cccccccCcCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCC
Q 027277 128 QGIGAGVI---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGE 204 (225)
Q Consensus 128 ~gl~~~~~---~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~ 204 (225)
+++..+.. .+.+....+++.+.|+|+|+++++++|+++||++++|++|+++++++++.++. .++++||+++|++|+
T Consensus 297 ~gl~~~~~g~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~-~~~~~vv~i~tg~g~ 375 (388)
T 1v8z_A 297 PGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEM-SRDEIIIVNLSGRGD 375 (388)
T ss_dssp TTSCCSBCCHHHHHHHHTTSEEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTS-CTTCEEEEEECBBSG
T ss_pred eccccCCCChhHHHHHhcCCcEEEEECHHHHHHHHHHHHHhcCCeecccHHHHHHHHHHHHHhc-CCCCEEEEEECCCCc
Confidence 45543211 12344567789999999999999999999999999999999999999988763 467899999988889
Q ss_pred CCcCh
Q 027277 205 RYLST 209 (225)
Q Consensus 205 ~~~~~ 209 (225)
||+++
T Consensus 376 k~~~~ 380 (388)
T 1v8z_A 376 KDLDI 380 (388)
T ss_dssp GGHHH
T ss_pred cCHHH
Confidence 99986
No 37
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.98 E-value=2.4e-32 Score=236.95 Aligned_cols=201 Identities=20% Similarity=0.294 Sum_probs=153.7
Q ss_pred HHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHH-HHhCCCeEEe-CCCCCCC----ChHhhHhhhHHHHHHhh----CCC
Q 027277 8 ERRIILRALGAEVYLADP-AVGFEGFVKKGEEI-LNRTPNGYIL-GQFENPA----NPEIHYETTGPEIWNDS----GGK 76 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~-~~~~~~~~~~a~~~-~~~~~~~~~~-~~~~~~~----~~~~g~~t~~~Ei~~Ql----~~~ 76 (225)
.|+.+|+.+||+|+.++. ..+++++.+.+.+. +++.++.+|+ +++.|+. ++..||+|++.||++|+ +..
T Consensus 143 ~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g~~t~~~Ei~~Ql~~~~~~~ 222 (396)
T 1qop_B 143 PNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRL 222 (396)
T ss_dssp HHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSC
T ss_pred hHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHHHHhHHHHHHHHHHHHhcCCC
Confidence 457899999999999984 34688888888764 5554455554 4443332 22358999999999999 456
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcc--------ccCCCC--------------------cccccc
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAV--------LNGGQP--------------------GKHLIQ 128 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~--------~~~~~~--------------------~~~~~~ 128 (225)
||+||+|+|+||+++|++.+++ .+|.+|||||||.++.. +..+.+ ..+..+
T Consensus 223 ~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia~ 301 (396)
T 1qop_B 223 PDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISA 301 (396)
T ss_dssp CSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSG
T ss_pred CCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCeeeeccchhhhcccccCCcCCCceeec
Confidence 9999999999999999999998 48899999999998642 111211 112335
Q ss_pred ccCCCCC---cccccccCcCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCC
Q 027277 129 GIGAGVI---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGER 205 (225)
Q Consensus 129 gl~~~~~---~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~ 205 (225)
+|..+.. .+.+.++.+++.+.|+|+|++++++.|+++|||+++|++|+++++++++.++...+++++|+++|++|+|
T Consensus 302 gl~~~~~g~~~~~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~~~~~~~vv~i~tg~g~k 381 (396)
T 1qop_B 302 GLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 381 (396)
T ss_dssp GGCCSSCCHHHHHHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGG
T ss_pred cCCCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 5543221 2234466789999999999999999999999999999999999999998876422578899999778899
Q ss_pred CcCh
Q 027277 206 YLST 209 (225)
Q Consensus 206 ~~~~ 209 (225)
|+++
T Consensus 382 ~~~~ 385 (396)
T 1qop_B 382 DIFT 385 (396)
T ss_dssp GHHH
T ss_pred CHHH
Confidence 9987
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.97 E-value=3.6e-31 Score=230.83 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=142.4
Q ss_pred HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEE-eCCCCC--CC--ChHhhHhhhHHHHHHhh----CC
Q 027277 7 IERRIILRALGAEVYLADP-AVGFEGFVKKGEE-ILNRTPNGYI-LGQFEN--PA--NPEIHYETTGPEIWNDS----GG 75 (225)
Q Consensus 7 ~~k~~~~~~~GA~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~--~~--~~~~g~~t~~~Ei~~Ql----~~ 75 (225)
+.|+.+|+.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.+ |+ ++..||++++.||++|+ +.
T Consensus 169 ~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~q~t~g~Ei~~Ql~~~~~~ 248 (422)
T 2o2e_A 169 ALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQIQGQAGR 248 (422)
T ss_dssp HHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 4678899999999999984 3478888887755 5566445555 444432 22 32458999999999998 34
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc--------cccCCCCc--------------------cccc
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA--------VLNGGQPG--------------------KHLI 127 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~--------~~~~~~~~--------------------~~~~ 127 (225)
.||+||+|+|+||+++|++.+++. .|.+|||||||.++. .+..+.+. .+..
T Consensus 249 ~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia 327 (422)
T 2o2e_A 249 LPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGSFSYLLQDEDGQTIESHSIS 327 (422)
T ss_dssp CCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC------------------------------------------
T ss_pred CCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCCcccchhHHHHHHcCCceeccccchhhcccccccccCCceee
Confidence 599999999999999999888864 788999999999872 22222211 1223
Q ss_pred cccCCCC---CcccccccCcCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCC
Q 027277 128 QGIGAGV---IPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGE 204 (225)
Q Consensus 128 ~gl~~~~---~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~ 204 (225)
++|..+. ....+....+++.+.|+|+|++++++.|+++|||++++++|++++++++++++. .+++++|+++|++|+
T Consensus 328 ~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~~~esa~A~a~a~~l~~~~-~~~~~vvvilsG~g~ 406 (422)
T 2o2e_A 328 AGLDYPGVGPEHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGALKLGVEL-GRGAVIVVNLSGRGD 406 (422)
T ss_dssp -------------------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-CTTCEEEEECCSCSS
T ss_pred cccCCCCCCHHHHHHHHhCCeeEEEECHHHHHHHHHHHHHHcCCccCchHHHHHHHHHHHHHhc-CCCCEEEEEeCCCCC
Confidence 4443221 123344567799999999999999999999999999999999999999887653 367899999988899
Q ss_pred CCcChh
Q 027277 205 RYLSTA 210 (225)
Q Consensus 205 ~~~~~~ 210 (225)
||++++
T Consensus 407 kd~~~~ 412 (422)
T 2o2e_A 407 KDVETA 412 (422)
T ss_dssp SHHHHH
T ss_pred CCHHHH
Confidence 999873
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=99.96 E-value=2.6e-29 Score=219.58 Aligned_cols=198 Identities=12% Similarity=0.017 Sum_probs=157.8
Q ss_pred CCC-CChHHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHHH------hCCCeEEeCCCCCCCChHhhHhhhHHHHHH
Q 027277 1 MPS-TYSIERRIILRALGAEV--YLADPAVGFEGFVKKGEEILN------RTPNGYILGQFENPANPEIHYETTGPEIWN 71 (225)
Q Consensus 1 vP~-~~~~~k~~~~~~~GA~v--~~~~~~~~~~~~~~~a~~~~~------~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 71 (225)
||+ ++|+.|+++|+.+||+| +.++ .+++++.+.++++.+ +. ++++++++ ||.+ +.||.++++||++
T Consensus 157 ~P~~~~s~~k~~~m~~~GA~V~~v~v~--g~~d~~~~~~~~~~~d~~~~~~~-~~~~~n~~-n~~~-~~gq~t~~~Ei~~ 231 (428)
T 1vb3_A 157 YPRGKISPLQEKLFCTLGGNIETVAID--GDFDACQALVKQAFDDEELKVAL-GLNSANSI-NISR-LLAQICYYFEAVA 231 (428)
T ss_dssp EETTCSCHHHHHHHHSCCTTEEEEEEE--SCHHHHHHHHHHGGGCHHHHHHH-TEECCSTT-SHHH-HHHTTHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHhcCCeEEEEEeC--CCHHHHHHHHHHHHhchhhhhhc-CeeeCCCC-CHHH-HHHHHHHHHHHHH
Confidence 688 59999999999999999 6666 468888888887764 23 57777775 5776 7899999999999
Q ss_pred hhCC---CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCccc----cCCCC-----ccccccccCCCCCcccc
Q 027277 72 DSGG---KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVL----NGGQP-----GKHLIQGIGAGVIPPVL 139 (225)
Q Consensus 72 Ql~~---~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~----~~~~~-----~~~~~~gl~~~~~~~~~ 139 (225)
|+.+ .||+||+|+|+||+++|++.+++...|.+|||+|++.+. .+ ..+.. ..+..+++..+. |.++
T Consensus 232 ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~-~l~~~~~~G~~~~~~~~~tis~g~~i~~-p~~~ 309 (428)
T 1vb3_A 232 QLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVND-TVPRFLHDGQWSPKATQATLSNAMDVSQ-PNNW 309 (428)
T ss_dssp TSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCC-HHHHHHHHSCCCCCCCCCCSSGGGCCSS-CTTH
T ss_pred HcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCCh-HHHHHHHcCCcccCCCCCcccchhcCCC-CccH
Confidence 9964 599999999999999999999987677789999998763 22 12322 223446665432 2221
Q ss_pred ------cccC-----cCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcC
Q 027277 140 ------DVAM-----LDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLS 208 (225)
Q Consensus 140 ------~~~~-----~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~ 208 (225)
..+. .+..+.|+|+|+.++++.| +++|+++||+||+++++++++.+ +++++|+++|++|.||++
T Consensus 310 ~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l-~~eGi~~~p~sa~a~aa~~~~~~----~~~~vV~i~tg~~~K~~~ 384 (428)
T 1vb3_A 310 PRVEELFRRKIWQLKELGYAAVDDETTQQTMREL-KELGYTSEPHAAVAYRALRDQLN----PGEYGLFLGTAHPAKFKE 384 (428)
T ss_dssp HHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHTTCC----TTCEEEEEECBCGGGGHH
T ss_pred HHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHH-HHCCeEECchHHHHHHHHHHHhC----CCCcEEEEeCCCCCCCHH
Confidence 2223 6789999999999999999 99999999999999999988654 467899999889999998
Q ss_pred hh
Q 027277 209 TA 210 (225)
Q Consensus 209 ~~ 210 (225)
++
T Consensus 385 ~v 386 (428)
T 1vb3_A 385 SV 386 (428)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=99.92 E-value=3.6e-25 Score=194.24 Aligned_cols=197 Identities=14% Similarity=0.108 Sum_probs=151.6
Q ss_pred CCCC-ChHHHHHHHHHcC-CEE--EEeCCCCChHHHHHHHHHHHHhCC-----CeEEeCCCCCCCChHhhHhhhHHHHHH
Q 027277 1 MPST-YSIERRIILRALG-AEV--YLADPAVGFEGFVKKGEEILNRTP-----NGYILGQFENPANPEIHYETTGPEIWN 71 (225)
Q Consensus 1 vP~~-~~~~k~~~~~~~G-A~v--~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 71 (225)
||++ +|+.|+.+|+.+| ++| +.++ ++++++.+.+++++++.+ +++++|+. |+.. ++||+|+++||++
T Consensus 169 ~P~~~~s~~k~~~~~~~gganV~vv~v~--g~fdda~~~~k~~~~d~~~~~~~~~~~vnsi-n~~r-i~GQ~T~~~Ei~~ 244 (468)
T 4f4f_A 169 FPNGRVSPVQQRQMTSSGFSNVHALSIE--GNFDDCQNLVKGMFNDLEFCDALSLSGVNSI-NWAR-IMPQVVYYFTAAL 244 (468)
T ss_dssp EETTCSCHHHHHHHHCSCCTTEEEEEEE--SCHHHHHHHHHHHHHCHHHHHHHTEEECCTT-SHHH-HGGGHHHHHHHHH
T ss_pred eCCCCCCHHHHHHHHhcCCCeEEEeecC--CCHHHHHHHHHHHHhccccccccceEeCCCC-CHHH-HHhHHHHHHHHHH
Confidence 6898 9999999999997 465 6666 479999999988876431 46777774 6776 8999999999999
Q ss_pred hhCCCccE---EEEecCcchhHHHHHHHHHhhC-CCcEEEEEeCCCCcccc----CCC-----CccccccccCCCCCccc
Q 027277 72 DSGGKVDA---FIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLN----GGQ-----PGKHLIQGIGAGVIPPV 138 (225)
Q Consensus 72 Ql~~~~d~---iv~~~G~Gg~~aGi~~~~k~~~-~~~~vigVe~~~~~~~~----~~~-----~~~~~~~gl~~~~~~~~ 138 (225)
|++ .+|. |++|+|+||+++|++.+ +.++ |..|+|+| +.+++++. .|+ ...+..++|.... +.+
T Consensus 245 ql~-~~d~~v~vvVPvG~GG~i~g~~~A-k~mGlPi~kli~a-~n~~~~l~~~l~~G~~~~~~~~~Tia~smdi~~-~sN 320 (468)
T 4f4f_A 245 SLG-APDRAVSFTVPTGNFGDIFAGYVA-KRMGLPIEQLIIA-TNDNDILSRTLESGAYEMRGVAQTTSPSMDIQI-SSN 320 (468)
T ss_dssp HTT-TTSSCEEEEEECSSSHHHHHHHHH-HHHTCCEEEEEEE-ECSCCHHHHHHHHSEEECCCCCCCSCGGGCCSS-CTT
T ss_pred hcc-cCCCCeEEEEEeCCcHHHHHHHHH-HHhCCCCCEEEEE-eCCchHHHHHHHcCCceecCCcceeCchhhcCc-cch
Confidence 995 7888 99999999999999887 4555 56799999 88877653 222 1234445665432 111
Q ss_pred ccc----------------------------------cC--cCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHHHHHHH
Q 027277 139 LDV----------------------------------AM--LDEVITVSSEEAIETSKLLALKEGLLVGISSGAAAAAAI 182 (225)
Q Consensus 139 ~~~----------------------------------~~--~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaalaa~~ 182 (225)
+.+ .. ....+.|+|+|+.++++.+++++|+++||+||+++++++
T Consensus 321 ~erl~~~l~~~d~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~VsD~ei~~ai~~l~~~~g~~vEP~~Ava~aa~~ 400 (468)
T 4f4f_A 321 FERLLFEAHGRDAAAVRGLMQGLKQSGGFTISEKPLSAIRSEFSAGRSTVDETAATIESVLSKDGYLLDPHSAIGVKVAR 400 (468)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHSEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHhcCCeeccHHHHHHHhhcceEEEECHHHHHHHHHHHHHHCCEEECHhHHHHHHHHH
Confidence 100 00 012689999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 183 RVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 183 ~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
++. .++.++|++.|.+|.|+.+.
T Consensus 401 ~~~----~~~~~~V~l~Ta~~~Kf~~~ 423 (468)
T 4f4f_A 401 EKA----SGTAPMVVLATAHPAKFPDA 423 (468)
T ss_dssp HHC----CSSSCEEEEECBCGGGSHHH
T ss_pred HHh----CCCCeEEEEecCCccccHHH
Confidence 873 24678999998899998775
No 41
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=99.92 E-value=8.7e-25 Score=193.93 Aligned_cols=204 Identities=14% Similarity=0.082 Sum_probs=149.2
Q ss_pred CCCC-ChHHHHHHH---HHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-----CeEEeCCCCCCCChHhhHhhhHHHHHH
Q 027277 1 MPST-YSIERRIIL---RALGAEVYLADPAVGFEGFVKKGEEILNRTP-----NGYILGQFENPANPEIHYETTGPEIWN 71 (225)
Q Consensus 1 vP~~-~~~~k~~~~---~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 71 (225)
||++ +|+.|+.+| +.+|++|+.++ ++++++.+.+++++++.+ +.++.|+. |+.. +.||.+..+|+++
T Consensus 184 ~P~~~~S~~q~~qm~~~~g~~~~vv~v~--g~fdda~~~vk~l~~~~~~~~~~~~~~~Ns~-N~~r-i~gQ~tyy~e~~~ 259 (514)
T 1kl7_A 184 YPTGRISPIQEEQMTTVPDENVQTLSVT--GTFDNCQDIVKAIFGDKEFNSKHNVGAVNSI-NWAR-ILAQMTYYFYSFF 259 (514)
T ss_dssp EETTSSCHHHHHHHHHCCCTTEEEEEES--SCHHHHHHHHHHHHHCSSCC--CCBCCCCSC-CHHH-HHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHhhhcCCCEEEEEcC--CCHHHHHHHHHHHHhcccccccceeEeeCCC-CHhH-HhhHHHHHHHHHH
Confidence 6887 898777777 34566777776 579999999999987642 23444443 4544 6899999999999
Q ss_pred hh-CC---CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCC-----C-ccccccccCCCCCcc
Q 027277 72 DS-GG---KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQ-----P-GKHLIQGIGAGVIPP 137 (225)
Q Consensus 72 Ql-~~---~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~-----~-~~~~~~gl~~~~~~~ 137 (225)
|+ ++ .||+||+|+|+||++.|++.+.+.-.|.+|+|+||+++ +++. .|. . ..+..++|.... |.
T Consensus 260 ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n-~~l~~~~~~G~~~~~~~~~~Tis~amdi~~-ps 337 (514)
T 1kl7_A 260 QATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEN-DILDRFLKSGLYERSDKVAATLSPAMDILI-SS 337 (514)
T ss_dssp HHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSC-CHHHHHHHHSEEECCSSCCCCSCGGGCCSS-CT
T ss_pred HHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCc-chHHHHHhcCCccCCCCCCCeechhhhcCC-CC
Confidence 98 43 58999999999999999886444335778999999998 4443 121 1 123334543322 22
Q ss_pred cccc---cCcC------------------------------------------eEEEeCHHHHHHHHHHHHHhc----CC
Q 027277 138 VLDV---AMLD------------------------------------------EVITVSSEEAIETSKLLALKE----GL 168 (225)
Q Consensus 138 ~~~~---~~~~------------------------------------------~~~~v~d~e~~~a~~~l~~~e----Gi 168 (225)
++.+ ...+ ..+.|+|+|+.++++++++++ |+
T Consensus 338 n~er~l~~l~~~~~~~~~~~~d~~~v~~~~~~l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e~~~ai~~l~~~~~~~~G~ 417 (514)
T 1kl7_A 338 NFERLLWYLAREYLANGDDLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEETSETIKKIYESSVNPKHY 417 (514)
T ss_dssp THHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHSEEECCHHHHHHHTTTEEEEECCHHHHHHHHHHHHHHCCSSTTC
T ss_pred cHHHHHHHHhccccccccccccHHHHHHHHHHHHhcCCeeccHHHHHHhhcCceEEEECHHHHHHHHHHHHHhCCCCCCE
Confidence 2211 1111 478999999999999999999 99
Q ss_pred eecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChh
Q 027277 169 LVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTA 210 (225)
Q Consensus 169 ~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~ 210 (225)
++||+||++++|++++.+++..+++++|++.|.+|.||.+.+
T Consensus 418 ~~ep~tAv~~aa~~~~~~~g~~~~~~vV~l~Ta~~~Kf~~~v 459 (514)
T 1kl7_A 418 ILDPHTAVGVCATERLIAKDNDKSIQYISLSTAHPAKFADAV 459 (514)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCTTSEEEEEECBCGGGGHHHH
T ss_pred EEcccHHHHHHHHHHHHHhccCCCCcEEEEECCchhhhHHHH
Confidence 999999999999999886532356789999999999988753
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=99.89 E-value=5.6e-23 Score=180.55 Aligned_cols=198 Identities=11% Similarity=0.008 Sum_probs=146.6
Q ss_pred CCCC-ChHHHHHHHHHcCC---EEEEeCCCCChHHHHHHHHHHHH------hCCCeEEeCCCCCCCChHhhHhhhHHHHH
Q 027277 1 MPST-YSIERRIILRALGA---EVYLADPAVGFEGFVKKGEEILN------RTPNGYILGQFENPANPEIHYETTGPEIW 70 (225)
Q Consensus 1 vP~~-~~~~k~~~~~~~GA---~v~~~~~~~~~~~~~~~a~~~~~------~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~ 70 (225)
||++ +|+.|+++|+.+|| +|+.++ ++++++.+.++++.. +. +.+++|++ |+.. ++||++..+|+.
T Consensus 182 ~P~~~~s~~k~~qm~~~Ga~nv~vv~v~--G~fDda~~~vk~~~~d~~~~~~~-~l~~vns~-Np~r-i~gQ~tyy~~~~ 256 (487)
T 3v7n_A 182 SPHKKMSAFQTAQMYSLQDPNIFNLAVN--GVFDDCQDIVKAVSNDHAFKAQQ-KIGTVNSI-NWAR-VVAQVVYYFKGY 256 (487)
T ss_dssp EETTCSCHHHHHHHHTCCCTTEEEEEEE--SCHHHHHHHHHHHHTCHHHHHHT-TEECCSTT-CHHH-HHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHhcCCCcEEEEEEC--CCHHHHHHHHHHhhhchHHHhhc-CeeeeCCC-CHHH-HHhHHHHHHHHH
Confidence 6887 99999999999998 677787 468999999888875 34 67888886 6776 899999988888
Q ss_pred HhhC---CCccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC-----cccc---ccccCCCCC
Q 027277 71 NDSG---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHL---IQGIGAGVI 135 (225)
Q Consensus 71 ~Ql~---~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~---~~gl~~~~~ 135 (225)
.|+. +.||+|++|+|+||+++|++.+.+.-.|.+|+|++++++ +++. .|+. ..+. .++|.++.
T Consensus 257 ~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n-~~l~~~~~~G~~~~~~~~~Ti~t~s~smdI~~- 334 (487)
T 3v7n_A 257 FAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEN-DVLDEFFRTGAYRVRSAQDTYHTSSPSMDISK- 334 (487)
T ss_dssp HHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTC-HHHHHHHHHSEEEC-------------------
T ss_pred HHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCC-cHHHHHHHcCCcccCCCCCccccCCchhccCC-
Confidence 8883 349999999999999999987755434667999999998 4443 2221 1223 34544332
Q ss_pred ccccc---c-----------------------------------cCcCeEEEeCHHHHHHHHHHHHHhcCCeecchHHHH
Q 027277 136 PPVLD---V-----------------------------------AMLDEVITVSSEEAIETSKLLALKEGLLVGISSGAA 177 (225)
Q Consensus 136 ~~~~~---~-----------------------------------~~~~~~~~v~d~e~~~a~~~l~~~eGi~~epssgaa 177 (225)
|.++. . ......+.|+|+|+.++++.+++++|+++||+||++
T Consensus 335 psn~er~l~~l~~~d~~~~~~~m~~l~~~g~~~l~~~~~~~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dPhtAva 414 (487)
T 3v7n_A 335 ASNFERFVFDLLGRDPARVVQLFRDVEQKGGFDLAASGDFARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDTHTADG 414 (487)
T ss_dssp CHHHHHHHHHHTTTCHHHHHHHHHHHHHHSEEETTTTTCTHHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred CccHHHHHHHHhCCCHHHHHHHHHHHHhcCCeecccchhHHHHHhhcceEEEECHHHHHHHHHHHHHHcCEEEChhHHHH
Confidence 11100 0 011245789999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEEecCCCCCCcCh
Q 027277 178 AAAAIRVAKRPENAGKLIVVIFPSAGERYLST 209 (225)
Q Consensus 178 laa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~ 209 (225)
++++.++.+ ++.++|++.|..+.|+.+.
T Consensus 415 ~aaa~~~~~----~~~~~V~l~Ta~p~Kf~~~ 442 (487)
T 3v7n_A 415 LKVAREHLR----PGVPMVVLETAQPIKFGES 442 (487)
T ss_dssp HHHHTTSCC----TTSCEEEEECBCGGGGHHH
T ss_pred HHHHHHhhC----CCCcEEEEecCCccccHHH
Confidence 999987642 3567899998889998876
No 43
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=78.22 E-value=21 Score=28.10 Aligned_cols=72 Identities=19% Similarity=0.142 Sum_probs=45.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+-..||+|+.++.. -+...+.+.++.+.. +.....+. |-.. ......+..++.+++ +++|.+|-.+|..
T Consensus 26 a~~la~~Ga~Vvi~~~~--~~~~~~~~~~l~~~g-~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-G~iDiLVNNAG~~ 97 (255)
T 4g81_D 26 AEGLAAAGARVILNDIR--ATLLAESVDTLTRKG-YDAHGVAF-DVTD-ELAIEAAFSKLDAEG-IHVDILINNAGIQ 97 (255)
T ss_dssp HHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTT-CCEEECCC-CTTC-HHHHHHHHHHHHHTT-CCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEe-eCCC-HHHHHHHHHHHHHHC-CCCcEEEECCCCC
Confidence 45566789999999853 334444455555443 33333343 3334 445566677888887 5799999998854
No 44
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=77.73 E-value=14 Score=28.83 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=30.6
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
..+++++- +.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 186 ~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d 228 (293)
T 3l6u_A 186 MRQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGID 228 (293)
T ss_dssp HHHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEec
Confidence 34555543 568999876 45567799999998875 78888875
No 45
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=77.24 E-value=19 Score=27.57 Aligned_cols=42 Identities=12% Similarity=0.241 Sum_probs=29.3
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC--CCcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN--PNIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~--~~~~vigVe 110 (225)
..+++++- ++||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 178 ~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~p~di~vig~d 221 (276)
T 3ksm_A 178 MLRLLKET-PTIDGLFTP--NESTTIGALVAIRQSGMSKQFGFIGFD 221 (276)
T ss_dssp HHHHHHHC-SCCCEEECC--SHHHHHHHHHHHHHTTCTTSSEEEEES
T ss_pred HHHHHHhC-CCceEEEEC--CchhhhHHHHHHHHcCCCCCeEEEEeC
Confidence 34555443 468998876 4567778999998876 357788774
No 46
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=73.91 E-value=26 Score=27.58 Aligned_cols=71 Identities=7% Similarity=-0.002 Sum_probs=44.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+-..||+|+.++.. .+...+.+.++.+.. +..+.-+. |-.. ......+..++.+++ +++|.+|-.+|.
T Consensus 24 A~~la~~Ga~Vv~~~~~--~~~~~~~~~~i~~~g-~~~~~~~~-Dvt~-~~~v~~~~~~~~~~~-G~iDiLVNNAGi 94 (254)
T 4fn4_A 24 AKKFALNDSIVVAVELL--EDRLNQIVQELRGMG-KEVLGVKA-DVSK-KKDVEEFVRRTFETY-SRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CCEEEEEC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEc-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCcc
Confidence 34556789999999853 334444444554333 33332232 3344 455666777888888 579999999884
No 47
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=73.17 E-value=30 Score=27.34 Aligned_cols=145 Identities=15% Similarity=0.146 Sum_probs=69.3
Q ss_pred ChHHHHHHHHHHHHhCCCeEEeCCCC-CCCChHhhHhhhHHHHHHhhCCC-ccEEEEecCcchhHHHHHHHHHhhCCCcE
Q 027277 28 GFEGFVKKGEEILNRTPNGYILGQFE-NPANPEIHYETTGPEIWNDSGGK-VDAFIAGIGTGGTVTGAGRFLKEKNPNIK 105 (225)
Q Consensus 28 ~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~g~~t~~~Ei~~Ql~~~-~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~ 105 (225)
+.+++.+..+++.+.-+....+.-.. +|. |.....||..|.++. +..+|-. +|..+++-... ++-
T Consensus 71 tve~AV~~mk~y~~~~~~avSVGLGaGDP~-----Q~~~Va~IA~~~~P~HVNQVFtg-------ag~trg~L~~~-~T~ 137 (275)
T 3m6y_A 71 TVEEAVTAMKAYGKEIDDAVSIGLGAGDNR-----QAAVVAEIAKHYPGSHINQVFPS-------VGATRANLGEK-DSW 137 (275)
T ss_dssp SHHHHHHHHHHHHHHTTTCEEEECCTTCGG-----GHHHHHHHTTTCCCSEECCBGGG-------HHHHHHHHTTC-CCE
T ss_pred CHHHHHHHHHHHHHhCCCceEEecCCCCHH-----HHHHHHHHHHhcCCCcccccccc-------hHHHHhhcCCC-ccE
Confidence 56788888899888875555554332 332 444577999998532 3444422 33344443322 332
Q ss_pred E-EEEeCCCCccccCCCCccccccccCCCCCcc----cccccCcCeEEE------eCHHHHHHHHHHHHHhcCCeecchH
Q 027277 106 V-YGIEPSESAVLNGGQPGKHLIQGIGAGVIPP----VLDVAMLDEVIT------VSSEEAIETSKLLALKEGLLVGISS 174 (225)
Q Consensus 106 v-igVe~~~~~~~~~~~~~~~~~~gl~~~~~~~----~~~~~~~~~~~~------v~d~e~~~a~~~l~~~eGi~~epss 174 (225)
| --|.|.+.+-+..=..+|.....-....++- .+.++.....+. ..-.|-+.++.+.+.++|+.+||++
T Consensus 138 VNaLVSPTG~~G~VkISTGp~Sas~~~~~~V~vetAiaml~dmG~~SvKffPM~Gl~~leEl~avAkAca~~g~~lEPTG 217 (275)
T 3m6y_A 138 INSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALVRDMGGNSLKYFPMKGLAHEEEYRAVAKACAEEGFALEPTG 217 (275)
T ss_dssp EEEEEBCCSSTTEEECCCSTTGGGSSSCCEEEHHHHHHHHHHHTCCEEEECCCTTTTTHHHHHHHHHHHHHHTCEEEEBS
T ss_pred EEEEEcCCCCcceEEeccCCCccccCCCceeeHHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCC
Confidence 2 3456666542210001111100000000000 011122222111 1223336777777778899999998
Q ss_pred HHH---HHHHHHHh
Q 027277 175 GAA---AAAAIRVA 185 (225)
Q Consensus 175 gaa---laa~~~~~ 185 (225)
|.- +...++.+
T Consensus 218 GIdl~Nf~~I~~i~ 231 (275)
T 3m6y_A 218 GIDKENFETIVRIA 231 (275)
T ss_dssp SCCTTTHHHHHHHH
T ss_pred CccHhHHHHHHHHH
Confidence 864 34444443
No 48
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=69.34 E-value=29 Score=26.89 Aligned_cols=42 Identities=26% Similarity=0.314 Sum_probs=29.2
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
..+++++- +.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 174 ~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~di~viG~D 216 (283)
T 2ioy_A 174 MENILQAQ-PKIDAVFAQ--NDEMALGAIKAIEAANRQGIIVVGFD 216 (283)
T ss_dssp HHHHHHHC-SCCCEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHHhC-CCccEEEEC--CchHHHHHHHHHHHCCCCCcEEEEeC
Confidence 34555443 468998876 34567788899988764 78888885
No 49
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=69.19 E-value=37 Score=26.21 Aligned_cols=43 Identities=21% Similarity=0.316 Sum_probs=31.8
Q ss_pred hHHHHHHhhCC---CccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 65 TGPEIWNDSGG---KVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 65 ~~~Ei~~Ql~~---~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
...+++++- + +||+|||. +.....|+..++++.+. ++.|+|.+
T Consensus 178 ~~~~~l~~~-~~~~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vvg~d 224 (291)
T 3l49_A 178 NVTDMLTKY-PNEGDVGAIWAC--WDVPMIGATQALQAAGRTDIRTYGVD 224 (291)
T ss_dssp HHHHHHHHC-CSTTSCCEEEES--SHHHHHHHHHHHHHTTCCSCEEEEEE
T ss_pred HHHHHHHhC-CCcCCcCEEEEC--CCchHHHHHHHHHHcCCCCeEEEEec
Confidence 344565554 4 69999875 56677899999998876 78888885
No 50
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=68.42 E-value=35 Score=26.04 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=42.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+...++.+.. ......+. |... ......+..++.+++ +.+|.+|..+|.
T Consensus 26 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-D~~~-~~~~~~~~~~~~~~~-g~id~li~~Ag~ 96 (253)
T 3qiv_A 26 AEALAREGAAVVVADIN--AEAAEAVAKQIVADG-GTAISVAV-DVSD-PESAKAMADRTLAEF-GGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEEC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEcCC--HHHHHHHHHHHHhcC-CcEEEEEc-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCc
Confidence 44556679999998853 233334444443333 33322232 3333 345566667777777 579999999986
No 51
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=67.95 E-value=30 Score=24.71 Aligned_cols=77 Identities=13% Similarity=0.143 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCCh-HhhHhhhHHHHHHhhCCCccEEEEecC
Q 027277 7 IERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANP-EIHYETTGPEIWNDSGGKVDAFIAGIG 85 (225)
Q Consensus 7 ~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~g~~t~~~Ei~~Ql~~~~d~iv~~~G 85 (225)
..-...+...|++|++...............+..++.+..++.-|.+ .... ......+..++.++. +. |.+|-+.|
T Consensus 30 ~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~D-v~~~~~~~v~~~~~~i~~~~-G~-dVLVnnAg 106 (157)
T 3gxh_A 30 EQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVD-WQNPKVEDVEAFFAAMDQHK-GK-DVLVHCLA 106 (157)
T ss_dssp HHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCC-TTSCCHHHHHHHHHHHHHTT-TS-CEEEECSB
T ss_pred HHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCC-CCCCCHHHHHHHHHHHHhcC-CC-CEEEECCC
Confidence 44556778899999987542211110001122334443444444443 2221 234444555555556 45 88888887
Q ss_pred c
Q 027277 86 T 86 (225)
Q Consensus 86 ~ 86 (225)
+
T Consensus 107 g 107 (157)
T 3gxh_A 107 N 107 (157)
T ss_dssp S
T ss_pred C
Confidence 5
No 52
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=67.47 E-value=39 Score=26.09 Aligned_cols=72 Identities=22% Similarity=0.233 Sum_probs=42.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+..+...++ +. +-.. ......+..++.++. +.+|.+|..+|..
T Consensus 29 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 100 (256)
T 3gaf_A 29 AGTFAKAGASVVVTDLK--SEGAEAVAAAIRQAGGKAIGL-EC-NVTD-EQHREAVIKAALDQF-GKITVLVNNAGGG 100 (256)
T ss_dssp HHHHHHHTCEEEEEESS--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34455569999998753 233333344443333233333 22 3333 445566677788887 5799999999864
No 53
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=66.79 E-value=42 Score=25.94 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=42.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++.+......++ +. |-.. ......+..++.+++ +.+|.+|..+|.
T Consensus 28 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~ 98 (264)
T 3ucx_A 28 ARRCAEQGADLVLAART--VERLEDVAKQVTDTGRRALSV-GT-DITD-DAQVAHLVDETMKAY-GRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHT-SCCSEEEECCCS
T ss_pred HHHHHHCcCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCcEEEECCCC
Confidence 44556679999998753 333333444444333233333 22 3333 445566677888877 579999999875
No 54
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=66.62 E-value=29 Score=26.51 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=30.6
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC---CCcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN---PNIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~---~~~~vigVe 110 (225)
..+++++-+..||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 170 ~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d 215 (272)
T 3o74_A 170 MQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFG 215 (272)
T ss_dssp HHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEES
T ss_pred HHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeC
Confidence 345555542268999885 4567779999999886 467888875
No 55
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=66.41 E-value=36 Score=26.45 Aligned_cols=48 Identities=8% Similarity=0.197 Sum_probs=32.9
Q ss_pred HhhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC--CcEEEEEe
Q 027277 59 EIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP--NIKVYGIE 110 (225)
Q Consensus 59 ~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~--~~~vigVe 110 (225)
..||. ...+++++- +.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 178 ~~~~~-~~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~~dv~vvGfD 227 (288)
T 1gud_A 178 IKALD-VATNVLQRN-PNIKAIYCA--NDTMAMGVAQAVANAGKTGKVLVVGTD 227 (288)
T ss_dssp HHHHH-HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEES
T ss_pred HHHHH-HHHHHHHhC-CCceEEEEC--CCchHHHHHHHHHhcCCCCCeEEEEeC
Confidence 34544 335666553 468999986 45577899999998753 57888874
No 56
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=66.38 E-value=42 Score=25.76 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=50.0
Q ss_pred HHHcCC-EEEEeCCCCC-hHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcchhH
Q 027277 13 LRALGA-EVYLADPAVG-FEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTV 90 (225)
Q Consensus 13 ~~~~GA-~v~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~ 90 (225)
+...|. +|.++.+... ..++.+-.++..++++-...............++. ...+++++- +.||+|||. +..+.
T Consensus 113 L~~~G~~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~a 188 (280)
T 3gyb_A 113 LIDLGHTHIAHLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLGPAVEHAGYT-ETLALLKEH-PEVTAIFSS--NDITA 188 (280)
T ss_dssp HHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCSCCCHHHHHH-HHHHHHHHC-TTCCEEEES--SHHHH
T ss_pred HHHCCCCeEEEEeCCCchHHHHHHHHHHHHHHcCcCCCcccccCCCCHHHHHH-HHHHHHhCC-CCCCEEEEC--ChHHH
Confidence 334455 4656654322 22333333444445422111111222233234444 345565553 579999976 45677
Q ss_pred HHHHHHHHhhC----CCcEEEEEe
Q 027277 91 TGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 91 aGi~~~~k~~~----~~~~vigVe 110 (225)
.|+..++++.+ .++.|+|.+
T Consensus 189 ~g~~~al~~~g~~vP~di~vvg~d 212 (280)
T 3gyb_A 189 IGALGAARELGLRVPEDLSIIGYD 212 (280)
T ss_dssp HHHHHHHHHHTCCTTTTCEEEEES
T ss_pred HHHHHHHHHcCCCCCCeeEEEEEC
Confidence 79999999886 357888885
No 57
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=64.38 E-value=46 Score=25.66 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=40.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+...++.+.. ......+. |... ......+..++.++. +.+|.+|..+|.
T Consensus 46 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-D~~~-~~~v~~~~~~~~~~~-g~id~lv~~Ag~ 116 (262)
T 3rkr_A 46 ARKLGSLGARVVLTARD--VEKLRAVEREIVAAG-GEAESHAC-DLSH-SDAIAAFATGVLAAH-GRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHHhC-CceeEEEe-cCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCc
Confidence 34455669998888752 233333334443332 33333232 2333 344555666777777 579999999986
No 58
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=64.07 E-value=32 Score=26.89 Aligned_cols=68 Identities=15% Similarity=0.220 Sum_probs=43.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+-..||+|+.++.. + +...+++++.++..++. . |-.. ......+..++.+++ +++|.+|-.+|.+
T Consensus 19 a~~la~~Ga~V~~~~~~---~---~~~~~~~~~~~~~~~~~-~-Dv~~-~~~v~~~v~~~~~~~-g~iDiLVNNAG~~ 86 (247)
T 3ged_A 19 CLDFLEAGDKVCFIDID---E---KRSADFAKERPNLFYFH-G-DVAD-PLTLKKFVEYAMEKL-QRIDVLVNNACRG 86 (247)
T ss_dssp HHHHHHTTCEEEEEESC---H---HHHHHHHTTCTTEEEEE-C-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC---H---HHHHHHHHhcCCEEEEE-e-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 44566789999999853 1 23344555554444442 2 3333 445566777888888 5799999988764
No 59
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=63.54 E-value=45 Score=26.21 Aligned_cols=72 Identities=17% Similarity=0.203 Sum_probs=40.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++....+...++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 45 a~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 45 ALALAADGVTVGALGRT--RTEVEEVADEIVGAGGQAIAL-EA-DVSD-ELQMRNAVRDLVLKF-GHLDIVVANAGIN 116 (283)
T ss_dssp HHHHHHTTCEEEEEESS--HHHHHHHHHHHTTTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-Ec-cCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 34455668998888742 233333334443322223332 22 3333 344556667777777 5799999999863
No 60
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=62.88 E-value=52 Score=25.64 Aligned_cols=72 Identities=14% Similarity=0.076 Sum_probs=41.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.+.. ......+. |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 43 a~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~-~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 43 AEGLAVAGARILINGTD--PSRVAQTVQEFRNVG-HDAEAVAF-DVTS-ESEIIEAFARLDEQG-IDVDILVNNAGIQ 114 (271)
T ss_dssp HHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTT-CCEEECCC-CTTC-HHHHHHHHHHHHHHT-CCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcC-CceEEEEc-CCCC-HHHHHHHHHHHHHHC-CCCCEEEECCCCC
Confidence 34556679999988752 233334444443333 33333333 3333 344555666777776 5799999999854
No 61
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=62.68 E-value=52 Score=25.49 Aligned_cols=35 Identities=6% Similarity=0.168 Sum_probs=26.5
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEeC
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 111 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe~ 111 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+-
T Consensus 187 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~ 225 (288)
T 3gv0_A 187 DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQS 225 (288)
T ss_dssp SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEES
T ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecC
Confidence 468999975 4567779999999876 3578888863
No 62
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=62.56 E-value=54 Score=25.68 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=40.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. +.+...+.+.++........++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 46 a~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 118 (280)
T 4da9_A 46 ARALAASGFDIAITGIG-DAEGVAPVIAELSGLGARVIFL-RA-DLAD-LSSHQATVDAVVAEF-GRIDCLVNNAGIA 118 (280)
T ss_dssp HHHHHHTTCEEEEEESC-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTS-GGGHHHHHHHHHHHH-SCCCEEEEECC--
T ss_pred HHHHHHCCCeEEEEeCC-CHHHHHHHHHHHHhcCCcEEEE-Ee-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcc
Confidence 44556679999888642 2233333344443333233333 22 2333 334455666777777 5799999999863
No 63
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=61.57 E-value=48 Score=26.19 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=43.3
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.+... +...+...++.++.+...++ +. |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 49 ia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lVnnAG~~ 120 (293)
T 3grk_A 49 IAKAAREAGAELAFTYQG---DALKKRVEPLAEELGAFVAG-HC-DVAD-AASIDAVFETLEKKW-GKLDFLVHAIGFS 120 (293)
T ss_dssp HHHHHHHTTCEEEEEECS---HHHHHHHHHHHHHHTCEEEE-EC-CTTC-HHHHHHHHHHHHHHT-SCCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHhcCCceEE-EC-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 345566679999888753 23334445555444333333 22 3333 344566667777777 5799999999865
No 64
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=61.55 E-value=48 Score=25.97 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=41.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++........++. . |... ......+..++.+++ +.+|.+|..+|..
T Consensus 49 a~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~-~-Dl~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 49 ALAYAEAGAQVAVAARH--SDALQVVADEIAGVGGKALPIR-C-DVTQ-PDQVRGMLDQMTGEL-GGIDIAVCNAGIV 120 (276)
T ss_dssp HHHHHHTTCEEEEEESS--GGGGHHHHHHHHHTTCCCEEEE-C-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCeEEEEE-c-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679999888753 2233333444433322333332 2 3333 344556667777777 5799999998854
No 65
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=61.39 E-value=56 Score=25.51 Aligned_cols=72 Identities=10% Similarity=0.022 Sum_probs=41.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.+......++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 41 a~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 112 (279)
T 3sju_A 41 ARTLAARGIAVYGCARD--AKNVSAAVDGLRAAGHDVDGS-SC-DVTS-TDEVHAAVAAAVERF-GPIGILVNSAGRN 112 (279)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-CSCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCcEEEECCCCC
Confidence 34455669999888752 233333344443333222222 22 3333 344555666777777 5799999999864
No 66
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=61.25 E-value=36 Score=26.63 Aligned_cols=72 Identities=10% Similarity=0.110 Sum_probs=42.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++.++.+......+. |... ......+..++.+++ +.+|.+|..+|.
T Consensus 44 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~ 115 (277)
T 4fc7_A 44 AEIFMRHGCHTVIASRS--LPRVLTAARKLAGATGRRCLPLSM-DVRA-PPAVMAAVDQALKEF-GRIDILINCAAG 115 (277)
T ss_dssp HHHHHTTTCEEEEEESC--HHHHHHHHHHHHHHHSSCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEEEc-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCcC
Confidence 44556679999998753 333344444544332222222222 3333 345566677888888 579999999984
No 67
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=61.22 E-value=49 Score=25.45 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=42.7
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.++.. .+...+...++.+..+..+...+. |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 39 ~a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~-Dl~~-~~~v~~~~~~~~~~~-g~id~li~~Ag~~ 112 (266)
T 3o38_A 39 TARRALLEGADVVISDYH--ERRLGETRDQLADLGLGRVEAVVC-DVTS-TEAVDALITQTVEKA-GRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTCSSCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEecCC--HHHHHHHHHHHHhcCCCceEEEEe-CCCC-HHHHHHHHHHHHHHh-CCCcEEEECCCcC
Confidence 345566679999988753 233333334443332122222222 3333 345566677888887 5799999999854
No 68
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=61.00 E-value=47 Score=25.57 Aligned_cols=71 Identities=18% Similarity=0.180 Sum_probs=40.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+...++ ++.++.....+. |... ......+..++.++. +.+|.+|..+|.
T Consensus 23 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~-~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~ 93 (257)
T 3imf_A 23 ATRFAKEGARVVITGRT--KEKLEEAKLEI-EQFPGQILTVQM-DVRN-TDDIQKMIEQIDEKF-GRIDILINNAAG 93 (257)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH-CCSTTCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHH-HhcCCcEEEEEc-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34556679999998753 22233333333 332232222222 3333 345566667777777 579999999884
No 69
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=60.90 E-value=58 Score=25.53 Aligned_cols=72 Identities=14% Similarity=0.053 Sum_probs=42.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.... ......+. |... ......+..++.++. +.+|.+|..+|..
T Consensus 25 a~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 96 (280)
T 3tox_A 25 ALLFAREGAKVVVTARN--GNALAELTDEIAGGG-GEAAALAG-DVGD-EALHEALVELAVRRF-GGLDTAFNNAGAL 96 (280)
T ss_dssp HHHHHHTTCEEEECCSC--HHHHHHHHHHHTTTT-CCEEECCC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999998853 233333333433322 33333333 3333 345556667777777 5799999999853
No 70
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=60.75 E-value=57 Score=25.38 Aligned_cols=72 Identities=13% Similarity=0.135 Sum_probs=42.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.... +.....+. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 21 a~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~-~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 21 ARELGVAGAKILLGARR--QARIEAIATEIRDAG-GTALAQVL-DVTD-RHSVAAFAQAAVDTW-GRIDVLVNNAGVM 92 (264)
T ss_dssp HHHHHHTTCEEEEEESS--HHHHHHHHHHHHHTT-CEEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEc-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999998753 233333344443332 33322222 3333 345556667777777 5799999999864
No 71
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=60.59 E-value=33 Score=26.57 Aligned_cols=42 Identities=17% Similarity=0.336 Sum_probs=28.4
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
..+++++- +.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 182 ~~~ll~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~d 224 (290)
T 2fn9_A 182 TEQILQAH-PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGFD 224 (290)
T ss_dssp HHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECCB
T ss_pred HHHHHHhC-CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEeC
Confidence 34555543 468998875 45567788999988763 66776653
No 72
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=60.53 E-value=50 Score=25.81 Aligned_cols=74 Identities=18% Similarity=0.169 Sum_probs=41.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.+. .+...+...++.+..+......+. +..........+..++.++. +.+|.+|..+|..
T Consensus 29 a~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~-Dl~~~~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 102 (311)
T 3o26_A 29 CKQLSSNGIMVVLTCRD--VTKGHEAVEKLKNSNHENVVFHQL-DVTDPIATMSSLADFIKTHF-GKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTCCSEEEEEC-CTTSCHHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCCceEEEEc-cCCCcHHHHHHHHHHHHHhC-CCCCEEEECCccc
Confidence 34555679999988753 233334444444433222222222 22221134455566676777 5799999999875
No 73
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=60.31 E-value=39 Score=23.34 Aligned_cols=82 Identities=20% Similarity=0.118 Sum_probs=49.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhC-CCccEEEEecCcch
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG-GKVDAFIAGIGTGG 88 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~-~~~d~iv~~~G~Gg 88 (225)
.+.++..|.+|+.++.. .+.. .++. +. +...+. .+... .|++++.+ ...|.+|++++.-.
T Consensus 23 a~~L~~~g~~v~vid~~---~~~~---~~~~-~~-g~~~i~--gd~~~---------~~~l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 23 GEKLLASDIPLVVIETS---RTRV---DELR-ER-GVRAVL--GNAAN---------EEIMQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp HHHHHHTTCCEEEEESC---HHHH---HHHH-HT-TCEEEE--SCTTS---------HHHHHHTTGGGCSEEEECCSCHH
T ss_pred HHHHHHCCCCEEEEECC---HHHH---HHHH-Hc-CCCEEE--CCCCC---------HHHHHhcCcccCCEEEEECCChH
Confidence 45667789999998852 2222 2222 23 333332 22322 13444432 34799999999765
Q ss_pred hHHHHHHHHHhhCCCcEEEEEe
Q 027277 89 TVTGAGRFLKEKNPNIKVYGIE 110 (225)
Q Consensus 89 ~~aGi~~~~k~~~~~~~vigVe 110 (225)
...-+...++.+++..+|++-.
T Consensus 84 ~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 84 EAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEEE
Confidence 5545566788888999988753
No 74
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=59.66 E-value=48 Score=25.50 Aligned_cols=75 Identities=19% Similarity=0.120 Sum_probs=43.2
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.+.... .+...+...++.++.+......+. |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 38 ~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~-Dl~~-~~~v~~~~~~~~~~~-g~id~li~nAg~~ 112 (267)
T 3gdg_A 38 AARGCAEMGAAVAITYASR-AQGAEENVKELEKTYGIKAKAYKC-QVDS-YESCEKLVKDVVADF-GQIDAFIANAGAT 112 (267)
T ss_dssp HHHHHHHTSCEEEECBSSS-SSHHHHHHHHHHHHHCCCEECCBC-CTTC-HHHHHHHHHHHHHHT-SCCSEEEECCCCC
T ss_pred HHHHHHHCCCeEEEEeCCc-chhHHHHHHHHHHhcCCceeEEec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 3455566799988876432 112234444444443233333333 3333 445566677887777 5799999998854
No 75
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=59.52 E-value=61 Score=25.29 Aligned_cols=137 Identities=15% Similarity=0.141 Sum_probs=66.8
Q ss_pred ChHHHHHHHHHHHHhCCCeEEeCCCC-CCCChHhhHhhhHHHHHHhhCCC-ccEEEEecCcchhHHHHHHHHHhhCCCcE
Q 027277 28 GFEGFVKKGEEILNRTPNGYILGQFE-NPANPEIHYETTGPEIWNDSGGK-VDAFIAGIGTGGTVTGAGRFLKEKNPNIK 105 (225)
Q Consensus 28 ~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~g~~t~~~Ei~~Ql~~~-~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~ 105 (225)
+.+++.+..+++.+.-++...+.-.. +|. |.....||..|.++. +..+|-. +|..+++-... ++-
T Consensus 49 tve~av~~mk~y~~~~~~avSVGLGaGDp~-----Q~~~Va~Ia~~~~P~HVNQvFtg-------ag~t~~~L~~~-~T~ 115 (249)
T 3m0z_A 49 DVASAVVDMRDYAKLIDNALSVGLGAGDPN-----QSAMVSEISRQVQPQHVNQVFTG-------VATSRALLGQN-ETV 115 (249)
T ss_dssp SHHHHHHHHHHHHHHTTTCEEEECSSSCGG-----GHHHHHHHHHHHCCSEECCBGGG-------HHHHHHHHTSS-CSE
T ss_pred CHHHHHHHHHHHHHhCCCceEEecCCCCHH-----HHHHHHHHHHhcCCCcccccccc-------hHHHHHhccCC-CeE
Confidence 56788888899988875556554332 332 444577999998532 4444422 34444443322 333
Q ss_pred E-EEEeCCCCccccCCCCccccccccCCCCCcc----cccccCcCeEEE------eCHHHHHHHHHHHHHhcCCeecchH
Q 027277 106 V-YGIEPSESAVLNGGQPGKHLIQGIGAGVIPP----VLDVAMLDEVIT------VSSEEAIETSKLLALKEGLLVGISS 174 (225)
Q Consensus 106 v-igVe~~~~~~~~~~~~~~~~~~gl~~~~~~~----~~~~~~~~~~~~------v~d~e~~~a~~~l~~~eGi~~epss 174 (225)
| --|.|.+.+-+..=..++....+- ...++- .+.++.....+. ..-.|-+.++.+.+.++|+.+||++
T Consensus 116 VNaLvsPTG~~G~VkIsTGp~Ss~~~-~~~V~vetAiaml~dmG~~SvKffPm~Gl~~l~E~~avAka~a~~g~~lEPTG 194 (249)
T 3m0z_A 116 VNGLVSPTGTPGMVKISTGPLSSGAA-DGIVPLETAIALLKDMGGSSIKYFPMGGLKHRAEFEAVAKACAAHDFWLEPTG 194 (249)
T ss_dssp EEEEEBCCSSTTEEECCCSTTGGGSS-CCEEEHHHHHHHHHHTTCCEEEECCCTTTTTHHHHHHHHHHHHHTTCEEEEBS
T ss_pred EEEEEcCCCccceEEeccCccccCCC-CceeeHHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCC
Confidence 3 346676664221000111100000 000000 011122222211 1223336777777778899999998
Q ss_pred HHHH
Q 027277 175 GAAA 178 (225)
Q Consensus 175 gaal 178 (225)
|.-+
T Consensus 195 GIdl 198 (249)
T 3m0z_A 195 GIDL 198 (249)
T ss_dssp SCCT
T ss_pred CccH
Confidence 8643
No 76
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=59.21 E-value=44 Score=25.65 Aligned_cols=41 Identities=22% Similarity=0.304 Sum_probs=29.3
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
.+++++- +.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 174 ~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~g~~dv~vvGfD 215 (271)
T 2dri_A 174 QNLLTAH-PDVQAVFAQ--NDEMALGALRALQTAGKSDVMVVGFD 215 (271)
T ss_dssp HHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCSCEEEEEE
T ss_pred HHHHHhC-CCccEEEEC--CCcHHHHHHHHHHHcCCCCcEEEEec
Confidence 4555433 468998877 45567799999988764 68888875
No 77
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=58.45 E-value=58 Score=25.53 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=41.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe-EEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNG-YILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.+..+.. .++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 50 a~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAG~~ 122 (281)
T 4dry_A 50 AQALSAEGYSVVITGRR--PDVLDAAAGEIGGRTGNIVRAV-VC-DVGD-PDQVAALFAAVRAEF-ARLDLLVNNAGSN 122 (281)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHSSCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCeEEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679999988753 233333344443332222 222 22 2333 344566667777777 5799999999864
No 78
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=58.10 E-value=68 Score=25.39 Aligned_cols=72 Identities=13% Similarity=0.052 Sum_probs=41.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++........++ +. |... ......+..++.++. +.+|.+|..+|.+
T Consensus 48 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~id~lvnnAg~~ 119 (301)
T 3tjr_A 48 ATEFARRGARLVLSDVD--QPALEQAVNGLRGQGFDAHGV-VC-DVRH-LDEMVRLADEAFRLL-GGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SSCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCceEEE-Ec-cCCC-HHHHHHHHHHHHHhC-CCCCEEEECCCcC
Confidence 44556679999888753 233333334443333233333 22 3333 344555666777777 5799999999854
No 79
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=57.34 E-value=45 Score=26.06 Aligned_cols=70 Identities=14% Similarity=0.094 Sum_probs=40.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++... ..+...++.++.+...++. .|... ......+..++.++. +.+|.+|..+|..
T Consensus 45 a~~l~~~G~~V~~~~r~~----~~~~~~~l~~~~~~~~~~~--~Dl~~-~~~v~~~~~~~~~~~-g~id~li~nAg~~ 114 (280)
T 3nrc_A 45 AKAMHREGAELAFTYVGQ----FKDRVEKLCAEFNPAAVLP--CDVIS-DQEIKDLFVELGKVW-DGLDAIVHSIAFA 114 (280)
T ss_dssp HHHHHHTTCEEEEEECTT----CHHHHHHHHGGGCCSEEEE--CCTTC-HHHHHHHHHHHHHHC-SSCCEEEECCCCC
T ss_pred HHHHHHcCCEEEEeeCch----HHHHHHHHHHhcCCceEEE--eecCC-HHHHHHHHHHHHHHc-CCCCEEEECCccC
Confidence 445556688888776532 1233344444443333332 23333 345566667777777 5799999999864
No 80
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=57.15 E-value=70 Score=25.22 Aligned_cols=74 Identities=14% Similarity=0.060 Sum_probs=42.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... ..+..+...+..++.+......+. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 66 a~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 139 (294)
T 3r3s_A 66 AIAYAREGADVAINYLPA-EEEDAQQVKALIEECGRKAVLLPG-DLSD-ESFARSLVHKAREAL-GGLDILALVAGKQ 139 (294)
T ss_dssp HHHHHHTTCEEEEECCGG-GHHHHHHHHHHHHHTTCCEEECCC-CTTS-HHHHHHHHHHHHHHH-TCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCCc-chhHHHHHHHHHHHcCCcEEEEEe-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCc
Confidence 345566799999887531 122333333333443333333333 3333 344556666777777 5799999999853
No 81
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=56.96 E-value=57 Score=25.37 Aligned_cols=43 Identities=12% Similarity=-0.040 Sum_probs=29.9
Q ss_pred HHHHHHhhC--CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 66 GPEIWNDSG--GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~--~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
..+++++.+ ..||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 180 ~~~~l~~~~~~~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D 228 (295)
T 3hcw_A 180 MQNLHTRLKDPNIKQAIISL--DAMLHLAILSVLYELNIEIPKDVMTATFN 228 (295)
T ss_dssp HHHHHHHHTCTTSCEEEEES--SHHHHHHHHHHHHHTTCCTTTTEEEEEEC
T ss_pred HHHHHhhcccCCCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 345555542 268998864 5567789999999876 357788874
No 82
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=56.92 E-value=37 Score=26.11 Aligned_cols=72 Identities=13% Similarity=0.126 Sum_probs=43.4
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.+.... ...+...++.++.+...++ + .|... ......+..++.++. +.+|.+|..+|..
T Consensus 32 ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~-~-~Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 103 (271)
T 3ek2_A 32 IAKACKREGAELAFTYVGD---RFKDRITEFAAEFGSELVF-P-CDVAD-DAQIDALFASLKTHW-DSLDGLVHSIGFA 103 (271)
T ss_dssp HHHHHHHTTCEEEEEESSG---GGHHHHHHHHHHTTCCCEE-E-CCTTC-HHHHHHHHHHHHHHC-SCEEEEEECCCCC
T ss_pred HHHHHHHcCCCEEEEecch---hhHHHHHHHHHHcCCcEEE-E-CCCCC-HHHHHHHHHHHHHHc-CCCCEEEECCccC
Confidence 3455667799999887532 2234445555554332222 1 13333 344566667777777 5799999999864
No 83
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=56.82 E-value=67 Score=24.93 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=40.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+...++.+......++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 45 a~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-D~~d-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 117 (269)
T 4dmm_A 45 ALELAAAGAKVAVNYAS-SAGAADEVVAAIAAAGGEAFAV-KA-DVSQ-ESEVEALFAAVIERW-GRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC-ChHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679998877642 2222223333333332223333 22 3333 445566677788887 5799999998864
No 84
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=56.52 E-value=48 Score=26.01 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=42.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
...+-..||+|+.++....- .+.+.++.+..+...++. . |-.. ......+..++.+++ +++|.+|-.+|.
T Consensus 24 a~~la~~Ga~Vv~~~r~~~~---~~~~~~~~~~~~~~~~~~-~-Dv~~-~~~v~~~v~~~~~~~-G~iDiLVNnAGi 93 (258)
T 4gkb_A 24 SMRLAEERAIPVVFARHAPD---GAFLDALAQRQPRATYLP-V-ELQD-DAQCRDAVAQTIATF-GRLDGLVNNAGV 93 (258)
T ss_dssp HHHHHHTTCEEEEEESSCCC---HHHHHHHHHHCTTCEEEE-C-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHcCCEEEEEECCccc---HHHHHHHHhcCCCEEEEE-e-ecCC-HHHHHHHHHHHHHHh-CCCCEEEECCCC
Confidence 34556679999998864321 223344444443444432 2 2333 344556677888888 579999999885
No 85
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=56.46 E-value=43 Score=26.53 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=42.5
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.++... +..+...++.++.+...++. . |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 48 ia~~la~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~-~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lVnnAG~~ 119 (296)
T 3k31_A 48 IAKAVCAQGAEVALTYLSE---TFKKRVDPLAESLGVKLTVP-C-DVSD-AESVDNMFKVLAEEW-GSLDFVVHAVAFS 119 (296)
T ss_dssp HHHHHHHTTCEEEEEESSG---GGHHHHHHHHHHHTCCEEEE-C-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCh---HHHHHHHHHHHhcCCeEEEE-c-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 3445566799999887532 22233344444433333332 2 3333 345566677787887 5799999999865
No 86
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=56.37 E-value=64 Score=24.54 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=41.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+...++.+......++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 21 a~~l~~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 93 (246)
T 3osu_A 21 ALQLAEEGYNVAVNYAG-SKEKAEAVVEEIKAKGVDSFAI-QA-NVAD-ADEVKAMIKEVVSQF-GSLDVLVNNAGIT 93 (246)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTSCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC-CHHHHHHHHHHHHhcCCcEEEE-Ec-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999887642 2223333333343332233333 22 3333 345566667788888 5799999999864
No 87
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=56.26 E-value=63 Score=24.44 Aligned_cols=72 Identities=15% Similarity=0.057 Sum_probs=40.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... .+...+...++.+......++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 22 a~~l~~~G~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-~~id~li~~Ag~~ 93 (247)
T 3lyl_A 22 AHALASKGATVVGTATS--QASAEKFENSMKEKGFKARGL-VL-NISD-IESIQNFFAEIKAEN-LAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHTTCEEEEEESS--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHTT-CCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCceEEE-Ee-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999988753 222333333333332223332 22 3333 344555666776666 5799999999864
No 88
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=55.98 E-value=67 Score=24.66 Aligned_cols=48 Identities=19% Similarity=0.294 Sum_probs=32.8
Q ss_pred hhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC--CcEEEEEeC
Q 027277 60 IHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP--NIKVYGIEP 111 (225)
Q Consensus 60 ~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~--~~~vigVe~ 111 (225)
.++. ...+++++- +.||+|||. +.....|+..++++.+. ++.|+|.+-
T Consensus 176 ~~~~-~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vvg~d~ 225 (289)
T 3brs_A 176 KAYD-GTVELLTKY-PDISVMVGL--NQYSATGAARAIKDMSLEAKVKLVCIDS 225 (289)
T ss_dssp HHHH-HHHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEEES
T ss_pred HHHH-HHHHHHHhC-CCceEEEEC--CCcchHHHHHHHHhcCCCCCEEEEEECC
Confidence 3443 344665543 568999875 45577899999998764 488888854
No 89
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=55.83 E-value=68 Score=24.71 Aligned_cols=72 Identities=13% Similarity=0.081 Sum_probs=41.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC-CCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRT-PNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.+.. ....++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 27 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lvnnAg~~ 99 (262)
T 3pk0_A 27 ATVFARAGANVAVAGRS--TADIDACVADLDQLGSGKVIGV-QT-DVSD-RAQCDALAGRAVEEF-GGIDVVCANAGVF 99 (262)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTSSSCEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhCCCcEEEE-Ec-CCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 34556679999998753 233333344443332 123332 22 3333 345556667787888 5799999999854
No 90
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=55.82 E-value=64 Score=25.40 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=42.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... +...+...+..++.+......+. |... ......+..++.++. +.+|.+|..+|..
T Consensus 64 a~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 64 SIAFAKEGANIAIAYLDE--EGDANETKQYVEKEGVKCVLLPG-DLSD-EQHCKDIVQETVRQL-GSLNILVNNVAQQ 136 (291)
T ss_dssp HHHHHHTTCEEEEEESSC--HHHHHHHHHHHHTTTCCEEEEES-CTTS-HHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHhcCCcEEEEEC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCc
Confidence 345566799998887532 22333344444443232222222 3333 345566667888888 5799999988753
No 91
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=55.66 E-value=54 Score=25.36 Aligned_cols=73 Identities=18% Similarity=0.182 Sum_probs=42.5
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC--CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecC
Q 027277 8 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP--NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIG 85 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G 85 (225)
.-.+.+-..||+|+.++... +..+.+.+..++.+ ...++ +. |-.. ......+..++.+++ +.+|.+|..+|
T Consensus 23 aiA~~la~~Ga~Vvi~~r~~---~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-G~iD~lvnnAg 95 (256)
T 4fs3_A 23 GVAKVLDQLGAKLVFTYRKE---RSRKELEKLLEQLNQPEAHLY-QI-DVQS-DEEVINGFEQIGKDV-GNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHTTCEEEEEESSG---GGHHHHHHHHGGGTCSSCEEE-EC-CTTC-HHHHHHHHHHHHHHH-CCCSEEEECCC
T ss_pred HHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCCcEEEE-Ec-cCCC-HHHHHHHHHHHHHHh-CCCCEEEeccc
Confidence 33455667899999998632 23333344433322 22332 22 2333 344555667778888 57999999888
Q ss_pred cc
Q 027277 86 TG 87 (225)
Q Consensus 86 ~G 87 (225)
..
T Consensus 96 ~~ 97 (256)
T 4fs3_A 96 FA 97 (256)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 92
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=55.35 E-value=57 Score=25.34 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=29.6
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC-----CCcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN-----PNIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~-----~~~~vigVe 110 (225)
..+++++- +.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 179 ~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~~dv~vig~D 225 (297)
T 3rot_A 179 VKSYFKIH-PETNIIFCL--TSQALDPLGQMLLHPDRYDFNYQPQVYSFD 225 (297)
T ss_dssp HHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHSHHHHTCCCCCEEEEEC
T ss_pred HHHHHHhC-CCCCEEEEc--CCcchHHHHHHHHhcCCccCCCceEEEEeC
Confidence 34555443 568998875 4567779999998874 378888885
No 93
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=55.13 E-value=35 Score=25.71 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=40.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... .+...+.+.++.++.+......+. |... ......+..++.+++ +.+|.+|..+|.+
T Consensus 19 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-D~~~-~~~v~~~~~~~~~~~-g~id~li~~Ag~~ 91 (235)
T 3l77_A 19 ARALARDGYALALGARS--VDRLEKIAHELMQEQGVEVFYHHL-DVSK-AESVEEFSKKVLERF-GDVDVVVANAGLG 91 (235)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEEEC-CTTC-HHHHHHHCC-HHHHH-SSCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhcCCeEEEEEe-ccCC-HHHHHHHHHHHHHhc-CCCCEEEECCccc
Confidence 45566679999988753 333334444443232222322222 3333 344455555677777 5799999999864
No 94
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=55.07 E-value=47 Score=25.70 Aligned_cols=73 Identities=18% Similarity=0.037 Sum_probs=41.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHH-HHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGF-VKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.+.....-.+. .+...++... +......+. |-.. ......+..++.+++ +.+|.+|..+|.
T Consensus 28 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~ 101 (262)
T 3ksu_A 28 AKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQS-DLSN-EEEVAKLFDFAEKEF-GKVDIAINTVGK 101 (262)
T ss_dssp HHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEEC-CCCS-HHHHHHHHHHHHHHH-CSEEEEEECCCC
T ss_pred HHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEEC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34455679999987542211222 3333333333 233333232 3333 445566677888888 579999999884
No 95
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=54.96 E-value=57 Score=25.21 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=42.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe-EEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNG-YILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.++.++. ....+. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 25 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lvnnAg~~ 98 (265)
T 3lf2_A 25 VELLLEAGAAVAFCARD--GERLRAAESALRQRFPGARLFASVC-DVLD-ALQVRAFAEACERTL-GCASILVNNAGQG 98 (265)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHSTTCCEEEEEC-CTTC-HHHHHHHHHHHHHHH-CSCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCceEEEEeC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 44556679999998753 333334444444433332 222222 2333 344556667777777 5799999999864
No 96
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=54.67 E-value=74 Score=24.75 Aligned_cols=73 Identities=18% Similarity=0.062 Sum_probs=40.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... ..+...+...++.+......++ +. +... ......+..++.+++ +.+|.+|..+|..
T Consensus 48 a~~la~~G~~V~~~~~~-~~~~~~~~~~~l~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 120 (271)
T 3v2g_A 48 AKRLALEGAAVALTYVN-AAERAQAVVSEIEQAGGRAVAI-RA-DNRD-AEAIEQAIRETVEAL-GGLDILVNSAGIW 120 (271)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC-CHHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCcEEEECCCCC
Confidence 34555679999887532 2222233333343333223333 22 3333 344556667888888 5799999998853
No 97
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=54.57 E-value=71 Score=24.56 Aligned_cols=72 Identities=17% Similarity=0.211 Sum_probs=41.3
Q ss_pred HHHHHHcCCEEEEe-CCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLA-DPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+ .. +.+...+.+.++.+......++ +. |-.. ......+..++.+++ +++|.+|..+|.+
T Consensus 21 a~~l~~~G~~vv~~~~r--~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 93 (258)
T 3oid_A 21 AIRLAENGYNIVINYAR--SKKAALETAEEIEKLGVKVLVV-KA-NVGQ-PAKIKEMFQQIDETF-GRLDVFVNNAASG 93 (258)
T ss_dssp HHHHHHTTCEEEEEESS--CHHHHHHHHHHHHTTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC--CHHHHHHHHHHHHhcCCcEEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 44566779999886 53 2233333334443332233333 22 3333 445566667777777 5799999999853
No 98
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=54.24 E-value=75 Score=24.70 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=40.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+......++. . +-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 45 a~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~-~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 45 ALELARRGAMVIGTATT--EAGAEGIGAAFKQAGLEGRGAV-L-NVND-ATAVDALVESTLKEF-GALNVLVNNAGIT 116 (270)
T ss_dssp HHHHHHTTCEEEEEESS--HHHHHHHHHHHHHHTCCCEEEE-C-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEEE-E-eCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679999888752 2333333334433322222221 1 2333 344556667788888 5799999998853
No 99
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=53.68 E-value=78 Score=24.73 Aligned_cols=74 Identities=11% Similarity=0.092 Sum_probs=41.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. +.+...+.+.++....++.....+. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 42 a~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 115 (281)
T 3v2h_A 42 ARTLAKAGANIVLNGFG-APDEIRTVTDEVAGLSSGTVLHHPA-DMTK-PSEIADMMAMVADRF-GGADILVNNAGVQ 115 (281)
T ss_dssp HHHHHHTTCEEEEECCC-CHHHHHHHHHHHHTTCSSCEEEECC-CTTC-HHHHHHHHHHHHHHT-SSCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC-ChHHHHHHHHHHhhccCCcEEEEeC-CCCC-HHHHHHHHHHHHHHC-CCCCEEEECCCCC
Confidence 34556679999988752 2223333333443332222322232 3333 345566667777777 5799999998853
No 100
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=53.61 E-value=75 Score=24.53 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=41.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR-TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.++ .....++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 37 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 109 (266)
T 4egf_A 37 ARAFAAAGARLVLSGRD--VSELDAARRALGEQFGTDVHTV-AI-DLAE-PDAPAELARRAAEAF-GGLDVLVNNAGIS 109 (266)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEE-EC-CTTS-TTHHHHHHHHHHHHH-TSCSEEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEE-Ee-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 34556679999988752 33333444444432 2223332 22 2222 233455666777777 5799999999864
No 101
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=53.55 E-value=76 Score=24.54 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=41.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+...++.+......++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 35 a~~l~~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lvnnAg~~ 107 (270)
T 3is3_A 35 AVHLGRLGAKVVVNYAN-STKDAEKVVSEIKALGSDAIAI-KA-DIRQ-VPEIVKLFDQAVAHF-GHLDIAVSNSGVV 107 (270)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEECCCCCC
T ss_pred HHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhcCCcEEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999886532 2222333333333332233333 22 3333 345566667888888 5799999998854
No 102
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=53.51 E-value=74 Score=25.20 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=41.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+-..||+|+.++.. .+...+.+.++ .+..+++. .|-.. ......+..++.+++ +++|.+|..+|.+
T Consensus 46 A~~la~~Ga~V~i~~r~--~~~l~~~~~~~---g~~~~~~~--~Dv~~-~~~v~~~~~~~~~~~-G~iDiLVNNAG~~ 114 (273)
T 4fgs_A 46 AKRFVAEGARVFITGRR--KDVLDAAIAEI---GGGAVGIQ--ADSAN-LAELDRLYEKVKAEA-GRIDVLFVNAGGG 114 (273)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH---CTTCEEEE--CCTTC-HHHHHHHHHHHHHHH-SCEEEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHc---CCCeEEEE--ecCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 45566789999999853 22222222222 11233332 23334 455566777888888 5799999999865
No 103
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=53.00 E-value=71 Score=25.20 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=28.1
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC-CCcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~-~~~~vigVe 110 (225)
..+++.+- ++||+||++- ..+..|+..++++.+ .++.|+|..
T Consensus 180 ~~~ll~~~-~~~~aI~~~n--D~~A~g~~~al~~~G~~dv~VvG~D 222 (316)
T 1tjy_A 180 AEGIIKAY-PDLDAIIAPD--ANALPAAAQAAENLKRNNLAIVGFS 222 (316)
T ss_dssp HHHHHHHC-SSCCEEEECS--TTHHHHHHHHHHHTTCCSCEEEEBC
T ss_pred HHHHHHhC-CCCCEEEECC--CccHHHHHHHHHHcCCCCEEEEEeC
Confidence 34555443 4688888764 456678888888877 346777763
No 104
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=52.48 E-value=70 Score=23.88 Aligned_cols=98 Identities=11% Similarity=0.083 Sum_probs=50.2
Q ss_pred hHHHHHHHHHcCCEE-EEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHh-hhHHHHHHhhCC-CccEEEE
Q 027277 6 SIERRIILRALGAEV-YLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYE-TTGPEIWNDSGG-KVDAFIA 82 (225)
Q Consensus 6 ~~~k~~~~~~~GA~v-~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~-t~~~Ei~~Ql~~-~~d~iv~ 82 (225)
+.+.+.....--..| ++.++..++ ...+.+.+..++.+-.|-+.= . .+|.. .-..|+.++... ..+.||+
T Consensus 10 ~~~~l~~~~~~~~~V~IimGS~SD~-~v~~~a~~~L~~~Gi~~dv~V-~-----SaHR~p~~l~~~~~~a~~~g~~ViIa 82 (182)
T 1u11_A 10 ASSALEDKAASAPVVGIIMGSQSDW-ETMRHADALLTELEIPHETLI-V-----SAHRTPDRLADYARTAAERGLNVIIA 82 (182)
T ss_dssp ----------CCCSEEEEESSGGGH-HHHHHHHHHHHHTTCCEEEEE-C-----CTTTCHHHHHHHHHHTTTTTCCEEEE
T ss_pred hhHHHHhhhcCCCEEEEEECcHHHH-HHHHHHHHHHHHcCCCeEEEE-E-----cccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 334444433333345 555544444 334556666667632222211 0 11111 112466666532 3789999
Q ss_pred ecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 83 GIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 83 ~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
..|.-+.+.|+..++- ...||||-+...
T Consensus 83 ~AG~aa~LpgvvA~~t----~~PVIgVP~~~~ 110 (182)
T 1u11_A 83 GAGGAAHLPGMCAAWT----RLPVLGVPVESR 110 (182)
T ss_dssp EEESSCCHHHHHHHHC----SSCEEEEEECCT
T ss_pred ecCchhhhHHHHHhcc----CCCEEEeeCCCC
Confidence 9999999999998874 356999976543
No 105
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=52.29 E-value=54 Score=25.44 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=26.7
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEeC
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 111 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe~ 111 (225)
++||+|||. +..+..|+..++++.+ .++.|+|.+-
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~ 222 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDD 222 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 468999876 4556779999999875 3578888863
No 106
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=52.19 E-value=74 Score=25.42 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=33.7
Q ss_pred HhhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEeCC
Q 027277 59 EIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIEPS 112 (225)
Q Consensus 59 ~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe~~ 112 (225)
..++. ...+++++- ++||+||+. +.....|+..++++.+. ++.|+|+.-.
T Consensus 190 ~~~~~-~~~~~L~~~-~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~~ 243 (350)
T 3h75_A 190 ERAYR-QAQQLLKRY-PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNSS 243 (350)
T ss_dssp HHHHH-HHHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESCC
T ss_pred HHHHH-HHHHHHHhC-CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCCC
Confidence 34443 344555554 568998875 45567799999998763 5889998643
No 107
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=51.53 E-value=81 Score=24.31 Aligned_cols=73 Identities=16% Similarity=0.082 Sum_probs=40.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... .+...+...++........++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 42 a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-Dl~~-~~~v~~~~~~~~~~~-g~id~li~nAg~~ 114 (269)
T 3gk3_A 42 SRRLHDAGMAVAVSHSER-NDHVSTWLMHERDAGRDFKAY-AV-DVAD-FESCERCAEKVLADF-GKVDVLINNAGIT 114 (269)
T ss_dssp HHHHHTTTCEEEEEECSC-HHHHHHHHHHHHTTTCCCEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCCc-hHHHHHHHHHHHhcCCceEEE-Ee-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 345556799998876322 222222222232222222222 22 3333 445566677888888 5799999999864
No 108
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=51.22 E-value=76 Score=24.84 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=27.2
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC--CCcEEEEEe
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN--PNIKVYGIE 110 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~--~~~~vigVe 110 (225)
.+++++- +.||+|||.. .....|+..++++.+ .++.|+|.+
T Consensus 174 ~~~l~~~-~~~~ai~~~~--d~~a~g~~~al~~~G~p~dv~vvg~d 216 (313)
T 2h3h_A 174 EAALNAH-PDLDAFFGVY--AYNGPAQALVVKNAGKVGKVKIVCFD 216 (313)
T ss_dssp HHHHHHC-TTCCEEEECS--TTHHHHHHHHHHHTTCTTTSEEEEEC
T ss_pred HHHHHHC-cCceEEEEcC--CCccHHHHHHHHHcCCCCCeEEEEeC
Confidence 3444443 4689988764 345668888988875 247787774
No 109
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=50.67 E-value=85 Score=24.90 Aligned_cols=41 Identities=24% Similarity=0.445 Sum_probs=29.1
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
.+++++ .++||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 234 ~~ll~~-~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vvg~D 278 (338)
T 3dbi_A 234 EMLLER-GAKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFD 278 (338)
T ss_dssp HHHHHT-TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred HHHHcC-CCCCeEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 344443 2569999975 4556779999999876 357888885
No 110
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=50.55 E-value=75 Score=24.34 Aligned_cols=71 Identities=14% Similarity=0.057 Sum_probs=40.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.+.. +.....+. |-.. ......+..++.++ +.+|.+|..+|..
T Consensus 24 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-Dv~~-~~~v~~~~~~~~~~--g~id~lv~nAg~~ 94 (252)
T 3h7a_A 24 AKKFAAEGFTVFAGRRN--GEKLAPLVAEIEAAG-GRIVARSL-DARN-EDEVTAFLNAADAH--APLEVTIFNVGAN 94 (252)
T ss_dssp HHHHHHTTCEEEEEESS--GGGGHHHHHHHHHTT-CEEEEEEC-CTTC-HHHHHHHHHHHHHH--SCEEEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcC-CeEEEEEC-cCCC-HHHHHHHHHHHHhh--CCceEEEECCCcC
Confidence 44556679999998853 223333344444333 33333232 3333 34455556666655 5799999999853
No 111
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=50.50 E-value=85 Score=24.25 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=41.5
Q ss_pred HHHHHHcCCEEEEeCCCC----------ChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 10 RIILRALGAEVYLADPAV----------GFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~----------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
.+.+...|++|+.++... +.+...+...++........++ +. |-.. ......+..++.+++ +.+|.
T Consensus 30 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~id~ 105 (278)
T 3sx2_A 30 AVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVAR-QA-DVRD-RESLSAALQAGLDEL-GRLDI 105 (278)
T ss_dssp HHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-CCCCE
T ss_pred HHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEE-eC-CCCC-HHHHHHHHHHHHHHc-CCCCE
Confidence 345566799999886431 1222223333333333233332 22 3333 345556667777777 57999
Q ss_pred EEEecCcc
Q 027277 80 FIAGIGTG 87 (225)
Q Consensus 80 iv~~~G~G 87 (225)
+|..+|..
T Consensus 106 lv~nAg~~ 113 (278)
T 3sx2_A 106 VVANAGIA 113 (278)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999864
No 112
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=50.17 E-value=51 Score=25.18 Aligned_cols=38 Identities=21% Similarity=0.227 Sum_probs=27.9
Q ss_pred cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 78 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 78 d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
..+=+.+|+|....-++..++..++..+|+||+.+...
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~ 121 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR 121 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH
Confidence 45667888888877666655445778899999987653
No 113
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=49.95 E-value=77 Score=25.06 Aligned_cols=72 Identities=14% Similarity=0.103 Sum_probs=40.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC-CCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRT-PNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.+.. +...++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 58 a~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 130 (293)
T 3rih_A 58 ATVFARAGANVAVAARS--PRELSSVTAELGELGAGNVIGV-RL-DVSD-PGSCADAARTVVDAF-GALDVVCANAGIF 130 (293)
T ss_dssp HHHHHHTTCEEEEEESS--GGGGHHHHHHHTTSSSSCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhhCCCcEEEE-EE-eCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679998888753 223333334443322 123322 22 3333 345556667777877 5799999998853
No 114
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=49.49 E-value=38 Score=26.95 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=27.8
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC--CcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP--NIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~--~~~vigVe 110 (225)
..+++++..+.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 187 ~~~ll~~~~~~~~aI~~~--nd~~A~g~~~al~~~G~~~di~vvg~D 231 (332)
T 2rjo_A 187 MQAWMTRFNSKIKGVWAA--NDDMALGAIEALRAEGLAGQIPVTGMD 231 (332)
T ss_dssp HHHHHHHHGGGEEEEEES--SHHHHHHHHHHHHHTTCBTTBCEECSB
T ss_pred HHHHHHhcCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCCEEEeec
Confidence 345555412458888874 45577788888888764 46666653
No 115
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=49.16 E-value=87 Score=24.72 Aligned_cols=44 Identities=20% Similarity=0.209 Sum_probs=30.0
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC--CCcEEEEEeCCC
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN--PNIKVYGIEPSE 113 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~--~~~~vigVe~~~ 113 (225)
.+++++- +.||+|||. +..+..|+..++++.+ .++.|+|++-..
T Consensus 180 ~~ll~~~-~~~~aI~~~--nd~~A~g~~~al~~~Gip~dv~vig~D~~~ 225 (325)
T 2x7x_A 180 DSMLRRH-PKIDAVYAH--NDRIAPGAYQAAKMAGREKEMIFVGIDALP 225 (325)
T ss_dssp HHHHHHC-SCCCEEEES--STTHHHHHHHHHHHTTCTTSSEEEEEECCC
T ss_pred HHHHHhC-CCCCEEEEC--CCchHHHHHHHHHHcCCCCCeEEEEECCCc
Confidence 4444443 468999875 4456778889998875 357888886543
No 116
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=48.69 E-value=84 Score=23.89 Aligned_cols=68 Identities=12% Similarity=0.184 Sum_probs=39.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. . + ...+..++.+...++. .|-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 19 a~~l~~~G~~V~~~~r~--~-~---~~~~~~~~~~~~~~~~--~Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 86 (247)
T 3dii_A 19 CLDFLEAGDKVCFIDID--E-K---RSADFAKERPNLFYFH--GDVAD-PLTLKKFVEYAMEKL-QRIDVLVNNACRG 86 (247)
T ss_dssp HHHHHHTTCEEEEEESC--H-H---HHHHHHTTCTTEEEEE--CCTTS-HHHHHHHHHHHHHHH-SCCCEEEECCC-C
T ss_pred HHHHHHCCCEEEEEeCC--H-H---HHHHHHHhcccCCeEE--eeCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999998753 1 1 2233334433333332 23333 345566677888888 5799999999854
No 117
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=48.31 E-value=42 Score=26.37 Aligned_cols=42 Identities=21% Similarity=0.288 Sum_probs=26.4
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC--CcEEEEE
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP--NIKVYGI 109 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~--~~~vigV 109 (225)
..+++++-++.||+|||. +..+..|+..++++.+. ++.|+|.
T Consensus 178 ~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~ 221 (313)
T 3m9w_A 178 MENALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQ 221 (313)
T ss_dssp HHHHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCC
T ss_pred HHHHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEec
Confidence 345555442468888876 44566688888887764 3555554
No 118
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=47.62 E-value=71 Score=27.50 Aligned_cols=67 Identities=22% Similarity=0.205 Sum_probs=37.5
Q ss_pred eEEeCCCCCCCChHhhHhhhHHHHHHhhC----------CCccEEEEecC-cchhHHHHHHHH----HhhCCCcEE--EE
Q 027277 46 GYILGQFENPANPEIHYETTGPEIWNDSG----------GKVDAFIAGIG-TGGTVTGAGRFL----KEKNPNIKV--YG 108 (225)
Q Consensus 46 ~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~----------~~~d~iv~~~G-~Gg~~aGi~~~~----k~~~~~~~v--ig 108 (225)
.++....+...||..||-+.|.|+.+++- +.++.+++..+ +|||=+|++..+ ++.+|+..+ ++
T Consensus 91 ~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~~ 170 (451)
T 3ryc_A 91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFS 170 (451)
T ss_dssp GEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEEEE
Confidence 45555555566788899899998876641 12443443332 344555665544 444665433 34
Q ss_pred EeCC
Q 027277 109 IEPS 112 (225)
Q Consensus 109 Ve~~ 112 (225)
|-|.
T Consensus 171 v~P~ 174 (451)
T 3ryc_A 171 IYPA 174 (451)
T ss_dssp EECC
T ss_pred EecC
Confidence 5554
No 119
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=47.51 E-value=97 Score=24.06 Aligned_cols=75 Identities=12% Similarity=0.164 Sum_probs=41.5
Q ss_pred HHHHHHcCCEEEEeCCCC-------------ChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCC
Q 027277 10 RIILRALGAEVYLADPAV-------------GFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGK 76 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~-------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~ 76 (225)
.+.+...|++|+.++... ...+..+...+..+..+......+. |... ......+..++.+++ +.
T Consensus 28 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~ 104 (286)
T 3uve_A 28 AVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV-DVRD-YDALKAAVDSGVEQL-GR 104 (286)
T ss_dssp HHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SC
T ss_pred HHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc-CCCC-HHHHHHHHHHHHHHh-CC
Confidence 445566799999886421 0123333333333333233332222 3333 345566667888888 57
Q ss_pred ccEEEEecCcc
Q 027277 77 VDAFIAGIGTG 87 (225)
Q Consensus 77 ~d~iv~~~G~G 87 (225)
+|.+|..+|.+
T Consensus 105 id~lv~nAg~~ 115 (286)
T 3uve_A 105 LDIIVANAGIG 115 (286)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCccc
Confidence 99999999853
No 120
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=47.48 E-value=1e+02 Score=24.26 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=41.4
Q ss_pred HHHHHHcCCEEEEeCCCC----------ChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 10 RIILRALGAEVYLADPAV----------GFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~----------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
.+.+...|++|+.++... +.+...+...++.... ......+. |-.. ......+..++.+++ +.+|.
T Consensus 45 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~iD~ 120 (299)
T 3t7c_A 45 AITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-RRIIASQV-DVRD-FDAMQAAVDDGVTQL-GRLDI 120 (299)
T ss_dssp HHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCE
T ss_pred HHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-CceEEEEC-CCCC-HHHHHHHHHHHHHHh-CCCCE
Confidence 345556799999876431 1222333333333332 32322232 3333 344566667888888 57999
Q ss_pred EEEecCcc
Q 027277 80 FIAGIGTG 87 (225)
Q Consensus 80 iv~~~G~G 87 (225)
+|..+|..
T Consensus 121 lv~nAg~~ 128 (299)
T 3t7c_A 121 VLANAALA 128 (299)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99998853
No 121
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=47.35 E-value=60 Score=27.92 Aligned_cols=67 Identities=25% Similarity=0.384 Sum_probs=37.6
Q ss_pred eEEeCCCCCCCChHhhHhhhHHHHHHhhC----------CCccEEEEecC-cchhHHHHHHHH----HhhCCCcEE--EE
Q 027277 46 GYILGQFENPANPEIHYETTGPEIWNDSG----------GKVDAFIAGIG-TGGTVTGAGRFL----KEKNPNIKV--YG 108 (225)
Q Consensus 46 ~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~----------~~~d~iv~~~G-~Gg~~aGi~~~~----k~~~~~~~v--ig 108 (225)
.++..+.+...||..||-+.|.|+.++.- +.++.+++..+ +|||=+|++..+ ++.+|+..+ ++
T Consensus 89 ~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~s 168 (445)
T 3ryc_B 89 NFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168 (445)
T ss_dssp GEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccceEE
Confidence 45555555567788899999998876641 12333443332 344555665554 444665333 45
Q ss_pred EeCC
Q 027277 109 IEPS 112 (225)
Q Consensus 109 Ve~~ 112 (225)
|-|.
T Consensus 169 V~Ps 172 (445)
T 3ryc_B 169 VMPS 172 (445)
T ss_dssp EECC
T ss_pred EEeC
Confidence 5554
No 122
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=46.85 E-value=1.1e+02 Score=24.40 Aligned_cols=74 Identities=19% Similarity=0.101 Sum_probs=41.7
Q ss_pred HHHHHHcCCEEEEeCCCC--------ChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEE
Q 027277 10 RIILRALGAEVYLADPAV--------GFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFI 81 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~--------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv 81 (225)
.+.+...|++|+.++... ..+...+...++.... ......+. |... ......+..++.++. +.+|.+|
T Consensus 44 a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lv 119 (322)
T 3qlj_A 44 ALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-GEAVADGS-NVAD-WDQAAGLIQTAVETF-GGLDVLV 119 (322)
T ss_dssp HHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-CEEEEECC-CTTS-HHHHHHHHHHHHHHH-SCCCEEE
T ss_pred HHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC-CcEEEEEC-CCCC-HHHHHHHHHHHHHHc-CCCCEEE
Confidence 344556799998886420 0122333334443333 33333333 3333 344555667777777 5799999
Q ss_pred EecCcc
Q 027277 82 AGIGTG 87 (225)
Q Consensus 82 ~~~G~G 87 (225)
..+|..
T Consensus 120 ~nAg~~ 125 (322)
T 3qlj_A 120 NNAGIV 125 (322)
T ss_dssp CCCCCC
T ss_pred ECCCCC
Confidence 999864
No 123
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=46.70 E-value=98 Score=23.85 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=40.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... .+..+...+..++.+....+.+. |... ......+..++.++. +.+|.+|..+|..
T Consensus 46 a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~-D~~~-~~~v~~~~~~~~~~~-g~id~li~nAg~~ 118 (271)
T 4iin_A 46 AKTLASMGLKVWINYRSN--AEVADALKNELEEKGYKAAVIKF-DAAS-ESDFIEAIQTIVQSD-GGLSYLVNNAGVV 118 (271)
T ss_dssp HHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhcCCceEEEEC-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCcC
Confidence 345556799998887522 23333333333333222222222 3333 345556666777777 5799999998864
No 124
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=46.66 E-value=95 Score=23.69 Aligned_cols=71 Identities=14% Similarity=0.178 Sum_probs=39.1
Q ss_pred HHHHHcCCEEEEeCCCCChHH--HHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 11 IILRALGAEVYLADPAVGFEG--FVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 11 ~~~~~~GA~v~~~~~~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
+.+...|++|+.++... +. ..+...++........++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 20 ~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 92 (258)
T 3a28_C 20 EKLAADGFDIAVADLPQ--QEEQAAETIKLIEAADQKAVFV-GL-DVTD-KANFDSAIDEAAEKL-GGFDVLVNNAGIA 92 (258)
T ss_dssp HHHHHHTCEEEEEECGG--GHHHHHHHHHHHHTTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-TCCCEEEECCCCC
T ss_pred HHHHHCCCEEEEEeCCc--chHHHHHHHHHHHhcCCcEEEE-Ec-cCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 44555699999887532 22 223333333222233333 22 2333 344455666777777 5799999998854
No 125
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=46.47 E-value=34 Score=27.11 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=26.6
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCC
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSE 113 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~ 113 (225)
.||+||+.. +.+..|+..++++.+ +.|+|++-..
T Consensus 181 ~~daI~~~~--D~~a~Gv~~a~~e~G--v~viG~D~~~ 214 (296)
T 2hqb_A 181 QVDVFYPAG--DGYHVPVVEAIKDQG--DFAIGYVGDQ 214 (296)
T ss_dssp TCCEEECCC--TTTHHHHHHHHHHHT--CEEEEEESCC
T ss_pred CCcEEEECC--CCCCHHHHHHHHHcC--CEEEEEecch
Confidence 489998765 446679999999877 8999998643
No 126
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=46.38 E-value=97 Score=23.74 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=40.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+...++.+..+...++. . |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 25 a~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 97 (259)
T 3edm_A 25 AIRFAQEGANVVLTYNG-AAEGAATAVAEIEKLGRSALAIK-A-DLTN-AAEVEAAISAAADKF-GEIHGLVHVAGGL 97 (259)
T ss_dssp HHHHHHTTCEEEEEECS-SCHHHHHHHHHHHTTTSCCEEEE-C-CTTC-HHHHHHHHHHHHHHH-CSEEEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhcCCceEEEE-c-CCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCcc
Confidence 44556679999988321 12233333333333222233332 2 3333 344556667777777 5799999998754
No 127
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=46.09 E-value=99 Score=23.73 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=39.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+..... +.+...+...++.+..+...++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 43 a~~l~~~G~~v~i~~~r-~~~~~~~~~~~l~~~~~~~~~~-~~-Dl~~-~~~~~~~~~~~~~~~-g~id~li~nAg~~ 115 (267)
T 4iiu_A 43 ARQLAADGFNIGVHYHR-DAAGAQETLNAIVANGGNGRLL-SF-DVAN-REQCREVLEHEIAQH-GAWYGVVSNAGIA 115 (267)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-CCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC-chHHHHHHHHHHHhcCCceEEE-Ee-cCCC-HHHHHHHHHHHHHHh-CCccEEEECCCCC
Confidence 34455678888654321 2233333344444443233332 22 3333 344555666777777 5799999998864
No 128
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=46.05 E-value=18 Score=30.03 Aligned_cols=52 Identities=15% Similarity=0.103 Sum_probs=36.0
Q ss_pred hhHhhhHHHHHHhhCCCccEEE--EecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 60 IHYETTGPEIWNDSGGKVDAFI--AGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 60 ~g~~t~~~Ei~~Ql~~~~d~iv--~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.|...+-.|+++.|..+|+.++ +.+|+||-...|. +.++++-+|||++-...
T Consensus 40 ~H~pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL---~~lg~~GrVig~D~Dp~ 93 (347)
T 3tka_A 40 KHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLIL---SQLGEEGRLLAIDRDPQ 93 (347)
T ss_dssp --CCTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHH---TTCCTTCEEEEEESCHH
T ss_pred CcccccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHH---HhCCCCCEEEEEECCHH
Confidence 3666778899999976676444 5678888765543 34467889999987654
No 129
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=46.00 E-value=93 Score=23.40 Aligned_cols=72 Identities=17% Similarity=0.238 Sum_probs=40.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC-CCe-EEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRT-PNG-YILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~-~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+...++.+.. +.. ++.-.. +... ......+..++.+++ +.+|.+|..+|.
T Consensus 31 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~d~-d~~~-~~~~~~~~~~~~~~~-g~id~lv~nAg~ 104 (247)
T 3i1j_A 31 ARAYAAHGASVVLLGRT--EASLAEVSDQIKSAGQPQPLIIALNL-ENAT-AQQYRELAARVEHEF-GRLDGLLHNASI 104 (247)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTSCCCEEEECCT-TTCC-HHHHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHCCCEEEEEecC--HHHHHHHHHHHHhcCCCCceEEEecc-ccCC-HHHHHHHHHHHHHhC-CCCCEEEECCcc
Confidence 34556679999988753 233333333333322 122 222222 1123 345566667777777 579999999885
No 130
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=45.98 E-value=63 Score=27.55 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=36.3
Q ss_pred CeEEeCCCCCCCChHhhHhhhHHHHHHhhC-------C---CccEEEEecCc-chhHHH----HHHHHHhhCCCcEE--E
Q 027277 45 NGYILGQFENPANPEIHYETTGPEIWNDSG-------G---KVDAFIAGIGT-GGTVTG----AGRFLKEKNPNIKV--Y 107 (225)
Q Consensus 45 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~-------~---~~d~iv~~~G~-Gg~~aG----i~~~~k~~~~~~~v--i 107 (225)
..++....+...+|..||-+.|.|+.++.- + .++.+++..|- |||=+| ++..+++.+|+.-+ +
T Consensus 89 ~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~ 168 (426)
T 2btq_B 89 SSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTF 168 (426)
T ss_dssp TSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEE
T ss_pred ccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEE
Confidence 345554444455677788888887765531 1 24446655442 333344 44455666665444 4
Q ss_pred EEeCC
Q 027277 108 GIEPS 112 (225)
Q Consensus 108 gVe~~ 112 (225)
+|-|.
T Consensus 169 ~V~p~ 173 (426)
T 2btq_B 169 SVVPS 173 (426)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 55443
No 131
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=45.97 E-value=41 Score=26.37 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=25.8
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 469999876 4556779999999876 357888874
No 132
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=45.77 E-value=1e+02 Score=23.75 Aligned_cols=73 Identities=12% Similarity=0.011 Sum_probs=39.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+...++ ++.+..+..-+. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 43 a~~l~~~G~~V~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~-Dl~~-~~~v~~~~~~~~~~~-g~id~li~nAg~~ 115 (272)
T 4e3z_A 43 CRLAARQGWRVGVNYAA-NREAADAVVAAI-TESGGEAVAIPG-DVGN-AADIAAMFSAVDRQF-GRLDGLVNNAGIV 115 (272)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHH-HHTTCEEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC-ChhHHHHHHHHH-HhcCCcEEEEEc-CCCC-HHHHHHHHHHHHHhC-CCCCEEEECCCCC
Confidence 34555678988776321 222222223333 333233322222 3333 445566677777777 5799999998854
No 133
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=45.74 E-value=50 Score=25.66 Aligned_cols=43 Identities=26% Similarity=0.400 Sum_probs=29.8
Q ss_pred HHHHHHhhC-CCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 66 GPEIWNDSG-GKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~-~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
..+++++.+ ..||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 192 ~~~~l~~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d 236 (309)
T 2fvy_A 192 MDAWLSGPNANKIEVVIAN--NDAMAMGAVEALKAHNKSSIPVFGVD 236 (309)
T ss_dssp HHHHHTSTTGGGCCEEEES--SHHHHHHHHHHHHHTTCTTSCEECSB
T ss_pred HHHHHHhCCCCCccEEEEC--CchhHHHHHHHHHHcCCCCceEEecC
Confidence 345555432 268999975 45677899999999886 66776653
No 134
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=45.56 E-value=1e+02 Score=23.84 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=40.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC--CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP--NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++.+... +.....+. |-.. ......+..++.++. +.+|.+|..+|.
T Consensus 28 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~ 101 (281)
T 3svt_A 28 AAGLVAAGASVMIVGRN--PDKLAGAVQELEALGANGGAIRYEPT-DITN-EDETARAVDAVTAWH-GRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTCCSSCEEEEEEC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhCCCCceEEEEeC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCc
Confidence 34555679999988753 2333333444433221 12222222 3333 344555666777777 579999999985
No 135
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=45.37 E-value=1.1e+02 Score=24.14 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=31.9
Q ss_pred HhhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 59 EIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 59 ~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
..++. ...+++++- +.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 219 ~~~~~-~~~~~l~~~-~~~~ai~~~--nd~~A~g~~~al~~~g~~di~vvg~D 267 (342)
T 1jx6_A 219 QSGYD-AAKASLAKH-PDVDFIYAC--STDVALGAVDALAELGREDIMINGWG 267 (342)
T ss_dssp HHHHH-HHHHHHHHC-CCCSEEEES--SHHHHHHHHHHHHHHTCTTSEEBCSB
T ss_pred HHHHH-HHHHHHHhC-CCccEEEEC--CChhHHHHHHHHHHcCCCCcEEEEeC
Confidence 34444 345666553 569999975 45677899999998763 56666553
No 136
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=44.84 E-value=83 Score=24.34 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=27.7
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC---CcEEEEEe
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP---NIKVYGIE 110 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~---~~~vigVe 110 (225)
.+++++- +++|++++-+.+-.+..|+..++++.+. ++.|+|.+
T Consensus 187 ~~~l~~~-~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D 232 (306)
T 8abp_A 187 NSMLVQH-PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGIN 232 (306)
T ss_dssp HHHHTTC-TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEES
T ss_pred HHHHHhC-CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeC
Confidence 3444332 4578844444566677788999988764 57788774
No 137
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=44.72 E-value=67 Score=24.57 Aligned_cols=71 Identities=17% Similarity=0.103 Sum_probs=40.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecC
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIG 85 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G 85 (225)
.+.+...|++|+.+.... .+..+...+..++.+......+. |... ......+..++.++. +.+|.+|..+|
T Consensus 24 a~~l~~~G~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-Dl~~-~~~v~~~~~~~~~~~-g~id~lv~~Ag 94 (264)
T 3i4f_A 24 TEKLLAKGYSVTVTYHSD--TTAMETMKETYKDVEERLQFVQA-DVTK-KEDLHKIVEEAMSHF-GKIDFLINNAG 94 (264)
T ss_dssp HHHHHHTTCEEEEEESSC--HHHHHHHHHHTGGGGGGEEEEEC-CTTS-HHHHHHHHHHHHHHH-SCCCEEECCCC
T ss_pred HHHHHHCCCEEEEEcCCC--hHHHHHHHHHHHhcCCceEEEEe-cCCC-HHHHHHHHHHHHHHh-CCCCEEEECCc
Confidence 445556799998885422 23333444443332222222222 3333 344556667777777 57999999998
No 138
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=44.66 E-value=1e+02 Score=23.49 Aligned_cols=72 Identities=18% Similarity=0.178 Sum_probs=41.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC---CCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRT---PNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++.+.. ....++. . |... ......+..++.++. +.+|.+|..+|.
T Consensus 24 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~-~-Dv~~-~~~v~~~~~~~~~~~-g~iD~lvnnAg~ 97 (250)
T 3nyw_A 24 AAGLATDGYRVVLIARS--KQNLEKVHDEIMRSNKHVQEPIVLP-L-DITD-CTKADTEIKDIHQKY-GAVDILVNAAAM 97 (250)
T ss_dssp HHHHHHHTCEEEEEESC--HHHHHHHHHHHHHHCTTSCCCEEEE-C-CTTC-HHHHHHHHHHHHHHH-CCEEEEEECCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHHhccccCcceEEe-c-cCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCc
Confidence 34455569999998753 233333444443332 1223322 2 3333 344556667777777 579999999986
Q ss_pred c
Q 027277 87 G 87 (225)
Q Consensus 87 G 87 (225)
.
T Consensus 98 ~ 98 (250)
T 3nyw_A 98 F 98 (250)
T ss_dssp C
T ss_pred C
Confidence 3
No 139
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=44.54 E-value=1.1e+02 Score=23.71 Aligned_cols=72 Identities=13% Similarity=0.013 Sum_probs=37.8
Q ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 11 IILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 11 ~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
+.+...|++|+.+.... .+...+.+.++........++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 45 ~~la~~G~~Vv~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-Dl~~-~~~v~~~~~~~~~~~-g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 45 ARLASDGFTVVINYAGK-AAAAEEVAGKIEAAGGKALTA-QA-DVSD-PAAVRRLFATAEEAF-GGVDVLVNNAGIM 116 (267)
T ss_dssp HHHHHHTCEEEEEESSC-SHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCEEEEEECCCCC
T ss_pred HHHHHCCCEEEEEcCCC-HHHHHHHHHHHHhcCCeEEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34445688887763211 122222333333322222322 22 3333 344556666777777 5799999999864
No 140
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=44.43 E-value=1.3e+02 Score=24.80 Aligned_cols=85 Identities=16% Similarity=0.222 Sum_probs=47.0
Q ss_pred HHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-CccEEEEecCc
Q 027277 9 RRIILRALGA-EVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG-KVDAFIAGIGT 86 (225)
Q Consensus 9 k~~~~~~~GA-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~-~~d~iv~~~G~ 86 (225)
-++..+.+|+ +|+.++.+ ++..+.++++- -...++. .+.. ...++.+..++ .+|.+|-++|+
T Consensus 229 aiqlak~~Ga~~Vi~~~~~---~~~~~~~~~lG----a~~vi~~-~~~~--------~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 229 AVAILKHAGASKVILSEPS---EVRRNLAKELG----ADHVIDP-TKEN--------FVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp HHHHHHHTTCSEEEEECSC---HHHHHHHHHHT----CSEEECT-TTSC--------HHHHHHHHTTTCCCSEEEECSSC
T ss_pred HHHHHHHcCCCEEEEECCC---HHHHHHHHHcC----CCEEEcC-CCCC--------HHHHHHHHhCCCCCCEEEECCCC
Confidence 3567789999 88888753 34555554442 1233332 2211 22344444443 49999999988
Q ss_pred ch-hHHHHHHHH-HhhCCCcEEEEE
Q 027277 87 GG-TVTGAGRFL-KEKNPNIKVYGI 109 (225)
Q Consensus 87 Gg-~~aGi~~~~-k~~~~~~~vigV 109 (225)
.. ++.-+...+ +...+.-+++.+
T Consensus 293 ~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 293 PQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp HHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred cHHHHHHHHHHHHhccCCCcEEEEe
Confidence 63 444444444 222555666655
No 141
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=44.05 E-value=1.1e+02 Score=23.65 Aligned_cols=74 Identities=12% Similarity=0.119 Sum_probs=41.7
Q ss_pred HHHHHHcCCEEEEeCCCC-----------ChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCcc
Q 027277 10 RIILRALGAEVYLADPAV-----------GFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVD 78 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~-----------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d 78 (225)
.+.+...|++|+.++... +.+...+.+.++.... ......+. |... ......+..++.+++ +.+|
T Consensus 28 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-D~~~-~~~v~~~~~~~~~~~-g~id 103 (277)
T 3tsc_A 28 AVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-RRIVAAVV-DTRD-FDRLRKVVDDGVAAL-GRLD 103 (277)
T ss_dssp HHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCC
T ss_pred HHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEC-CCCC-HHHHHHHHHHHHHHc-CCCC
Confidence 445566799999886411 2223333333333333 32322222 3333 345566677888888 5799
Q ss_pred EEEEecCcc
Q 027277 79 AFIAGIGTG 87 (225)
Q Consensus 79 ~iv~~~G~G 87 (225)
.+|..+|..
T Consensus 104 ~lvnnAg~~ 112 (277)
T 3tsc_A 104 IIVANAGVA 112 (277)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999999864
No 142
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=43.95 E-value=1.1e+02 Score=23.66 Aligned_cols=74 Identities=14% Similarity=0.163 Sum_probs=41.3
Q ss_pred HHHHHHcCCEEEEeCCCCC----------hHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 10 RIILRALGAEVYLADPAVG----------FEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~----------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
.+.+...|++|+.++.... .+...+...++.+......++ +. |-.. ......+..++.+++ +.+|.
T Consensus 27 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~id~ 102 (281)
T 3s55_A 27 AVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISA-KV-DVKD-RAALESFVAEAEDTL-GGIDI 102 (281)
T ss_dssp HHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-TCCCE
T ss_pred HHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEE-eC-CCCC-HHHHHHHHHHHHHhc-CCCCE
Confidence 4455667999998875311 222222223333322233333 22 3333 344566667777777 57999
Q ss_pred EEEecCcc
Q 027277 80 FIAGIGTG 87 (225)
Q Consensus 80 iv~~~G~G 87 (225)
+|..+|..
T Consensus 103 lv~nAg~~ 110 (281)
T 3s55_A 103 AITNAGIS 110 (281)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999854
No 143
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.76 E-value=1.1e+02 Score=23.60 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=40.5
Q ss_pred HHHHHHcCCEEEEeCCCCC----------hHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 10 RIILRALGAEVYLADPAVG----------FEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~----------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
.+.+...|++|+.++...+ .+...+...++........++ +. |-.. ......+..++.++. +.+|.
T Consensus 27 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~id~ 102 (287)
T 3pxx_A 27 AVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA-EV-DVRD-RAAVSRELANAVAEF-GKLDV 102 (287)
T ss_dssp HHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCE
T ss_pred HHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE-Ec-cCCC-HHHHHHHHHHHHHHc-CCCCE
Confidence 4456667999998864311 122222223333332223332 22 2333 344555666777777 57999
Q ss_pred EEEecCcc
Q 027277 80 FIAGIGTG 87 (225)
Q Consensus 80 iv~~~G~G 87 (225)
+|..+|..
T Consensus 103 lv~nAg~~ 110 (287)
T 3pxx_A 103 VVANAGIC 110 (287)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
Confidence 99998864
No 144
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=43.20 E-value=57 Score=25.25 Aligned_cols=42 Identities=7% Similarity=0.137 Sum_probs=29.0
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEeC
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 111 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe~ 111 (225)
.+++++ .+.||+|||. +..+..|+..++++.+ .++.|+|.+-
T Consensus 181 ~~~l~~-~~~~~ai~~~--~d~~A~g~~~al~~~G~~vP~di~vvg~D~ 226 (290)
T 2rgy_A 181 CQLLES-KAPFTGLFCA--NDTMAVSALARFQQLGISVPGDVSVIGYDD 226 (290)
T ss_dssp HHHHHH-TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred HHHHhC-CCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEeCC
Confidence 344443 2468999964 5567779999998875 3577888853
No 145
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=43.12 E-value=36 Score=27.25 Aligned_cols=45 Identities=16% Similarity=0.370 Sum_probs=30.8
Q ss_pred hHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC---CCcEEEEEeCCCC
Q 027277 65 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN---PNIKVYGIEPSES 114 (225)
Q Consensus 65 ~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~---~~~~vigVe~~~~ 114 (225)
++.+++++ .||+||+..+ .+..|+..++++.+ .++.|+|++-...
T Consensus 180 ~a~~ll~~---~~daI~~~~d--~~a~Gv~~a~~e~g~~P~dv~viG~D~~~~ 227 (318)
T 2fqx_A 180 LAAKLYDS---GVNVIFQVAG--GTGNGVIKEARDRRLNGQDVWVIGVDRDQY 227 (318)
T ss_dssp HHHHHHHT---TCCEEEEECG--GGHHHHHHHHHHHHHTTCCCEEEEEESCCG
T ss_pred HHHHHHHC---CCcEEEECCC--CCchHHHHHHHhhhhccCCcEEEEEecchh
Confidence 34455543 3899988754 46668888888742 4689999987554
No 146
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=43.10 E-value=37 Score=26.61 Aligned_cols=34 Identities=12% Similarity=-0.048 Sum_probs=25.1
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 201 ~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 201 HMPSVIITS--DVMLNMQLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCcceEEEEEC
Confidence 468998874 5566778899998875 357788874
No 147
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=43.09 E-value=99 Score=23.43 Aligned_cols=73 Identities=15% Similarity=-0.018 Sum_probs=39.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... .+...+...++.+......++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 30 a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~~Ag~~ 102 (256)
T 3ezl_A 30 CQRLHKDGFRVVAGCGPN-SPRRVKWLEDQKALGFDFYAS-EG-NVGD-WDSTKQAFDKVKAEV-GEIDVLVNNAGIT 102 (256)
T ss_dssp HHHHHHTTEEEEEEECTT-CSSHHHHHHHHHHTTCCCEEE-EC-CTTC-HHHHHHHHHHHHHHT-CCEEEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCCC-HHHHHHHHHHHHhcCCeeEEE-ec-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 344556799998765211 112222233333332223332 22 2333 344555666777777 5799999999864
No 148
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=43.03 E-value=58 Score=25.18 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=26.6
Q ss_pred CCCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEeC
Q 027277 74 GGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 111 (225)
Q Consensus 74 ~~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe~ 111 (225)
.+.||+|||. +..+..|+..++++.+ .++.|+|.+-
T Consensus 183 ~~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 222 (290)
T 3clk_A 183 NTDLTGIIAA--SDMTAIGILNQASSFGIEVPKDLSIVSIDG 222 (290)
T ss_dssp TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred cCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEeCC
Confidence 4569999875 4557778999998875 3577888753
No 149
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=42.82 E-value=1.1e+02 Score=23.18 Aligned_cols=72 Identities=19% Similarity=0.174 Sum_probs=39.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+......++ +. |... ......+..++.++. +.+|.||..+|..
T Consensus 30 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-~~id~vi~~Ag~~ 101 (260)
T 3awd_A 30 VTALAEAGARVIIADLD--EAMATKAVEDLRMEGHDVSSV-VM-DVTN-TESVQNAVRSVHEQE-GRVDILVACAGIC 101 (260)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCceEEE-Ee-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34455679999988753 222222333333322233333 22 2333 334455566777777 5799999998854
No 150
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=42.81 E-value=78 Score=24.24 Aligned_cols=72 Identities=18% Similarity=0.155 Sum_probs=42.0
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC--eEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPN--GYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
-.+.+...|++|+.+.... ...+...++.++.++ ..++ +. |-.. ......+..++.++. +.+|.+|..+|.
T Consensus 25 ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~id~li~~Ag~ 97 (266)
T 3oig_A 25 IARSLHEAGARLIFTYAGE---RLEKSVHELAGTLDRNDSIIL-PC-DVTN-DAEIETCFASIKEQV-GVIHGIAHCIAF 97 (266)
T ss_dssp HHHHHHHTTCEEEEEESSG---GGHHHHHHHHHTSSSCCCEEE-EC-CCSS-SHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHCCCEEEEecCch---HHHHHHHHHHHhcCCCCceEE-eC-CCCC-HHHHHHHHHHHHHHh-CCeeEEEEcccc
Confidence 3455667799999887532 223344444444322 2222 22 2333 344555667777777 579999999886
Q ss_pred c
Q 027277 87 G 87 (225)
Q Consensus 87 G 87 (225)
.
T Consensus 98 ~ 98 (266)
T 3oig_A 98 A 98 (266)
T ss_dssp C
T ss_pred c
Confidence 4
No 151
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=42.48 E-value=1.2e+02 Score=23.53 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=41.2
Q ss_pred HHHHHHcCCEEEEeCCCC----------ChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 10 RIILRALGAEVYLADPAV----------GFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~----------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
.+.+...|++|+.++... .-.+..+...+..++.+......+. |-.. ......+..++.+++ +.+|.
T Consensus 32 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~id~ 108 (280)
T 3pgx_A 32 AVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVL-DVRD-DAALRELVADGMEQF-GRLDV 108 (280)
T ss_dssp HHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEEC-CTTC-HHHHHHHHHHHHHHH-CCCCE
T ss_pred HHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEc-CCCC-HHHHHHHHHHHHHHc-CCCCE
Confidence 345556799999876410 0123333333333333232222222 3333 345566667788888 57999
Q ss_pred EEEecCcc
Q 027277 80 FIAGIGTG 87 (225)
Q Consensus 80 iv~~~G~G 87 (225)
+|..+|..
T Consensus 109 lvnnAg~~ 116 (280)
T 3pgx_A 109 VVANAGVL 116 (280)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999864
No 152
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=42.40 E-value=61 Score=28.09 Aligned_cols=66 Identities=27% Similarity=0.239 Sum_probs=36.4
Q ss_pred EEeCCCCCCCChHhhHhhhHHHHHHhhC----------CCccEEEEecC-cchhHHHH----HHHHHhhCCCc--EEEEE
Q 027277 47 YILGQFENPANPEIHYETTGPEIWNDSG----------GKVDAFIAGIG-TGGTVTGA----GRFLKEKNPNI--KVYGI 109 (225)
Q Consensus 47 ~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~----------~~~d~iv~~~G-~Gg~~aGi----~~~~k~~~~~~--~vigV 109 (225)
++..+.+...+|..||-+.|.|+.++.- +.++.+++..| +|||=+|+ +..+++.+|+. -.++|
T Consensus 94 ~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~~ilt~~V 173 (473)
T 2bto_A 94 LISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAV 173 (473)
T ss_dssp EEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCCceEEEEE
Confidence 4444445556677788888887766541 12444555544 33444554 44556666653 34555
Q ss_pred eCC
Q 027277 110 EPS 112 (225)
Q Consensus 110 e~~ 112 (225)
-|.
T Consensus 174 ~P~ 176 (473)
T 2bto_A 174 LPS 176 (473)
T ss_dssp ECC
T ss_pred ecC
Confidence 554
No 153
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=42.38 E-value=1.1e+02 Score=23.06 Aligned_cols=72 Identities=19% Similarity=0.233 Sum_probs=39.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++....+...++ +. |... ......+..++.++. +.+|.||..+|..
T Consensus 28 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 28 AITFATAGASVVVSDIN--ADAANHVVDEIQQLGGQAFAC-RC-DITS-EQELSALADFAISKL-GKVDILVNNAGGG 99 (255)
T ss_dssp HHHHHTTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC--HHHHHHHHHHHHHhCCceEEE-Ec-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 34455669999888753 222222333333322233333 22 2333 344455566777777 5799999998864
No 154
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=42.26 E-value=1.2e+02 Score=23.46 Aligned_cols=73 Identities=15% Similarity=0.033 Sum_probs=39.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+......++ +. |... ......+..++.+++++.+|.+|..+|..
T Consensus 38 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 38 VEELAGLGARVYTCSRN--EKELDECLEIWREKGLNVEGS-VC-DLLS-RTERDKLMQTVAHVFDGKLNILVNNAGVV 110 (273)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHTTSCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCceEEE-EC-CCCC-HHHHHHHHHHHHHHcCCCCcEEEECCCCC
Confidence 34455679999888753 222223333333322222222 22 2333 33445555666666645799999999864
No 155
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=42.25 E-value=1.1e+02 Score=23.32 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=39.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+......++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 24 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~id~lv~nAg~~ 95 (262)
T 1zem_A 24 ALRLAEEGTAIALLDMN--REALEKAEASVREKGVEARSY-VC-DVTS-EEAVIGTVDSVVRDF-GKIDFLFNNAGYQ 95 (262)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTSCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-Ee-cCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 44556679999988753 222223333333222123222 22 2333 344455566777777 5799999999864
No 156
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=42.25 E-value=1.2e+02 Score=23.40 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=46.4
Q ss_pred EEEEeCCCCC---hHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHH
Q 027277 19 EVYLADPAVG---FEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGR 95 (225)
Q Consensus 19 ~v~~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~ 95 (225)
+|.++.+..+ ..++.+-.++..++. +.-+............++. ...+++ +- ++||+ ||+ +.....|+..
T Consensus 138 ~i~~i~~~~~~~~~~~R~~gf~~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~l-~~-~~~~a-i~~--~d~~a~g~~~ 210 (304)
T 3o1i_D 138 NIALLLGPRTRGGTKPVTTGFYEAIKNS-DIHIVDSFWADNDKELQRN-LVQRVI-DM-GNIDY-IVG--SAVAIEAAIS 210 (304)
T ss_dssp EEEEECCCC-----CHHHHHHHHTTTTB-TEEEEECCCCCSCHHHHHH-HHHHHH-HH-SCCSE-EEE--CHHHHHHHHH
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHhcC-CCEEEEeecCCCcHHHHHH-HHHHHH-cC-CCCCE-EEe--cCcchHHHHH
Confidence 4666654221 223444444444444 5444433333333244544 445666 54 47999 654 5677889999
Q ss_pred HHHhhCC--CcEEEEE
Q 027277 96 FLKEKNP--NIKVYGI 109 (225)
Q Consensus 96 ~~k~~~~--~~~vigV 109 (225)
++++.+. ++.|+|.
T Consensus 211 al~~~g~~~di~vvg~ 226 (304)
T 3o1i_D 211 ELRSADKTHDIGLVSV 226 (304)
T ss_dssp HHTTTTCGGGSEEBCS
T ss_pred HHHhcCCCCCeEEEEe
Confidence 9998875 5777765
No 157
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=42.02 E-value=1.1e+02 Score=23.88 Aligned_cols=74 Identities=12% Similarity=0.002 Sum_probs=42.0
Q ss_pred HHHHHHcCCEEEEeCCCCC-hH----HHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEec
Q 027277 10 RIILRALGAEVYLADPAVG-FE----GFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGI 84 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~-~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~ 84 (225)
.+.+...|++|+.++.... .+ ...+.+.++.+.. ......+. |-.. ......+..++.++. +.+|.+|..+
T Consensus 26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lvnnA 101 (285)
T 3sc4_A 26 AKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-GQALPIVG-DIRD-GDAVAAAVAKTVEQF-GGIDICVNNA 101 (285)
T ss_dssp HHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-SEEEEEEC-CTTS-HHHHHHHHHHHHHHH-SCCSEEEECC
T ss_pred HHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-CcEEEEEC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECC
Confidence 3455567999988875321 00 1223334444333 33322222 3333 345566677888887 5799999999
Q ss_pred Ccc
Q 027277 85 GTG 87 (225)
Q Consensus 85 G~G 87 (225)
|..
T Consensus 102 g~~ 104 (285)
T 3sc4_A 102 SAI 104 (285)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 158
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=41.92 E-value=96 Score=23.76 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=26.3
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 187 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 187 NTPKALFCN--SDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCCcEEEEc--CCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 468999975 5567779999999876 357888886
No 159
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=41.89 E-value=45 Score=27.42 Aligned_cols=82 Identities=20% Similarity=0.105 Sum_probs=44.4
Q ss_pred HHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHH---hhCCCccEEEEec
Q 027277 9 RRIILRALGA-EVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWN---DSGGKVDAFIAGI 84 (225)
Q Consensus 9 k~~~~~~~GA-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~---Ql~~~~d~iv~~~ 84 (225)
-++..+.+|| +|+.++.+ ++..+.++++- -...++. .+.. ...++.+ ..++.+|.||-++
T Consensus 198 aiqlak~~Ga~~Vi~~~~~---~~~~~~a~~lG----a~~vi~~-~~~~--------~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 198 TVQLARLAGATTVILSTRQ---ATKRRLAEEVG----ATATVDP-SAGD--------VVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp HHHHHHHTTCSEEEEECSC---HHHHHHHHHHT----CSEEECT-TSSC--------HHHHHHSTTSSSTTCEEEEEECS
T ss_pred HHHHHHHcCCCEEEEECCC---HHHHHHHHHcC----CCEEECC-CCcC--------HHHHHHhhhhccCCCCCEEEECC
Confidence 3567789999 88888753 34444444431 1223332 2211 1223333 2334699999999
Q ss_pred CcchhHHHHHHHHHhhCCCcEEEEE
Q 027277 85 GTGGTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 85 G~Gg~~aGi~~~~k~~~~~~~vigV 109 (225)
|++.++.-. ++.+.+.-+++-+
T Consensus 262 G~~~~~~~~---~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 262 GVAETVKQS---TRLAKAGGTVVIL 283 (370)
T ss_dssp CCHHHHHHH---HHHEEEEEEEEEC
T ss_pred CCHHHHHHH---HHHhccCCEEEEE
Confidence 887665443 4444445566554
No 160
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=41.78 E-value=38 Score=27.38 Aligned_cols=82 Identities=10% Similarity=-0.003 Sum_probs=45.1
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 8 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.-++..+.+|++|+.++.+ ++..+.+ ++.+-...++. .+.. ...++.+.. +.+|.+|.++|++
T Consensus 181 ~a~qla~~~Ga~Vi~~~~~---~~~~~~~----~~lGa~~~i~~-~~~~--------~~~~~~~~~-g~~d~vid~~g~~ 243 (340)
T 3s2e_A 181 VAVQYARAMGLRVAAVDID---DAKLNLA----RRLGAEVAVNA-RDTD--------PAAWLQKEI-GGAHGVLVTAVSP 243 (340)
T ss_dssp HHHHHHHHTTCEEEEEESC---HHHHHHH----HHTTCSEEEET-TTSC--------HHHHHHHHH-SSEEEEEESSCCH
T ss_pred HHHHHHHHCCCeEEEEeCC---HHHHHHH----HHcCCCEEEeC-CCcC--------HHHHHHHhC-CCCCEEEEeCCCH
Confidence 3467788999999988753 3444433 34422223332 2211 122343433 4689999999988
Q ss_pred hhHHHHHHHHHhhCCCcEEEEE
Q 027277 88 GTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~~~vigV 109 (225)
.++.-.. +.+.+.-+++-+
T Consensus 244 ~~~~~~~---~~l~~~G~iv~~ 262 (340)
T 3s2e_A 244 KAFSQAI---GMVRRGGTIALN 262 (340)
T ss_dssp HHHHHHH---HHEEEEEEEEEC
T ss_pred HHHHHHH---HHhccCCEEEEe
Confidence 7765443 334444455544
No 161
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=41.68 E-value=1.1e+02 Score=23.13 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=40.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++........++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 24 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-Dv~~-~~~~~~~~~~~~~~~-g~id~lv~nAg~~ 95 (247)
T 2jah_A 24 ARALAAEGAAVAIAARR--VEKLRALGDELTAAGAKVHVL-EL-DVAD-RQGVDAAVASTVEAL-GGLDILVNNAGIM 95 (247)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679999988753 222223333333322223332 22 2333 344455666777777 5799999998853
No 162
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=41.53 E-value=1.2e+02 Score=23.48 Aligned_cols=44 Identities=20% Similarity=0.165 Sum_probs=29.9
Q ss_pred HHHHHHhh--CCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEeC
Q 027277 66 GPEIWNDS--GGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIEP 111 (225)
Q Consensus 66 ~~Ei~~Ql--~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe~ 111 (225)
..+++++- ++.||+|||. +..+..|+..++++.+. ++.|+|.+-
T Consensus 179 ~~~ll~~~~~~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~ 228 (306)
T 2vk2_A 179 MESFIKAENNGKNICMVYAH--NDDMVIGAIQAIKEAGLKPGKDILTGSIDG 228 (306)
T ss_dssp HHHHHHHTTTTTTCCEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEEEC
T ss_pred HHHHHHhCCCCCCeeEEEEC--CchHHHHHHHHHHHcCCCCCCCeEEEeecC
Confidence 34555543 1468998875 45677889999988753 577888853
No 163
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=41.32 E-value=1.2e+02 Score=23.15 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=39.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-C-eEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP-N-GYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~-~-~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++.+..+ . .++.-... ... ......+..++.++. +.+|.+|..+|.
T Consensus 29 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~-~~~~~~~~~~~~~~~-g~id~lv~nAg~ 102 (252)
T 3f1l_A 29 AMTYARYGATVILLGRN--EEKLRQVASHINEETGRQPQWFILDLL-TCT-SENCQQLAQRIAVNY-PRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHSCCCEEEECCTT-TCC-HHHHHHHHHHHHHHC-SCCSEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhcCCCceEEEEecc-cCC-HHHHHHHHHHHHHhC-CCCCEEEECCcc
Confidence 34556679999998753 2333333344433321 2 22222111 122 344555666777766 579999999986
No 164
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=41.24 E-value=1.2e+02 Score=23.42 Aligned_cols=72 Identities=15% Similarity=0.117 Sum_probs=39.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+......++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 39 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 39 ARRLGKEGLRVFVCARG--EEGLRTTLKELREAGVEADGR-TC-DVRS-VPEIEALVAAVVERY-GPVDVLVNNAGRP 110 (277)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHT-CSCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCceEEE-EC-CCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 34555679999988753 222222333333322223332 22 2333 334455566777777 5799999998853
No 165
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=41.18 E-value=1.1e+02 Score=23.73 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=39.4
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.+.... +..+...++.++.+...++. .|-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 39 ia~~l~~~G~~V~~~~r~~---~~~~~~~~l~~~~~~~~~~~--~Dl~~-~~~v~~~~~~~~~~~-g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 39 IAKSFHREGAQLAFTYATP---KLEKRVREIAKGFGSDLVVK--CDVSL-DEDIKNLKKFLEENW-GSLDIIVHSIAYA 110 (285)
T ss_dssp HHHHHHHTTCEEEEEESSG---GGHHHHHHHHHHTTCCCEEE--CCTTC-HHHHHHHHHHHHHHT-SCCCEEEECCCCC
T ss_pred HHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHhcCCeEEEE--cCCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 3445556799988877532 12223344444332222221 12333 334455566777776 5799999999864
No 166
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=41.00 E-value=47 Score=24.61 Aligned_cols=81 Identities=17% Similarity=0.160 Sum_probs=46.8
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHh-hhHHHHHHhhCC-CccEEEEecCcchhHHHHHHHHH
Q 027277 21 YLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYE-TTGPEIWNDSGG-KVDAFIAGIGTGGTVTGAGRFLK 98 (225)
Q Consensus 21 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~-t~~~Ei~~Ql~~-~~d~iv~~~G~Gg~~aGi~~~~k 98 (225)
++.++..++ ...+.+.+..++. |.-| +-. ...+|.. .--.|+.++... .++.||+..|.-+.+.|+..++-
T Consensus 17 IimGS~SD~-~v~~~a~~~l~~~-gi~~----ev~-V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvvA~~t 89 (173)
T 4grd_A 17 VLMGSSSDW-DVMKHAVAILQEF-GVPY----EAK-VVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGMLAAKT 89 (173)
T ss_dssp EEESSGGGH-HHHHHHHHHHHHT-TCCE----EEE-ECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHHHHHC
T ss_pred EEeCcHhHH-HHHHHHHHHHHHc-CCCE----EEE-EEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhheecC
Confidence 445543344 3455666667777 4211 100 1012211 012355555532 48899999999999999998864
Q ss_pred hhCCCcEEEEEeCC
Q 027277 99 EKNPNIKVYGIEPS 112 (225)
Q Consensus 99 ~~~~~~~vigVe~~ 112 (225)
...||||-+.
T Consensus 90 ----~~PVIgVPv~ 99 (173)
T 4grd_A 90 ----TVPVLGVPVA 99 (173)
T ss_dssp ----CSCEEEEEEC
T ss_pred ----CCCEEEEEcC
Confidence 3569999544
No 167
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=40.63 E-value=1.2e+02 Score=23.33 Aligned_cols=74 Identities=9% Similarity=0.005 Sum_probs=42.7
Q ss_pred HHHHHHcCCEEEEeCCCCC-hH----HHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEec
Q 027277 10 RIILRALGAEVYLADPAVG-FE----GFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGI 84 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~-~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~ 84 (225)
.+.+...|++|+.++.... .+ ...+.+.++.... ......+. |-.. ......+..++.+++ +.+|.+|..+
T Consensus 23 a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-g~iD~lvnnA 98 (274)
T 3e03_A 23 ALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG-GQGLALKC-DIRE-EDQVRAAVAATVDTF-GGIDILVNNA 98 (274)
T ss_dssp HHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT-SEEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECC
T ss_pred HHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC-CeEEEEeC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECC
Confidence 4455667999998875321 00 1223333443333 33333232 3333 455666777888888 5799999999
Q ss_pred Ccc
Q 027277 85 GTG 87 (225)
Q Consensus 85 G~G 87 (225)
|..
T Consensus 99 G~~ 101 (274)
T 3e03_A 99 SAI 101 (274)
T ss_dssp CCC
T ss_pred Ccc
Confidence 853
No 168
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=40.14 E-value=48 Score=25.57 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=25.5
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 468999876 4556779999999876 357788874
No 169
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=40.08 E-value=1.2e+02 Score=23.02 Aligned_cols=72 Identities=14% Similarity=0.078 Sum_probs=39.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++........++ +. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 19 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 90 (256)
T 1geg_A 19 ALRLVKDGFAVAIADYN--DATAKAVASEINQAGGHAVAV-KV-DVSD-RDQVFAAVEQARKTL-GGFDVIVNNAGVA 90 (256)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTS-HHHHHHHHHHHHHHT-TCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-Ee-cCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 44556679999988753 222223333333322223332 22 2333 334455566777777 5799999998853
No 170
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=39.91 E-value=1.3e+02 Score=23.51 Aligned_cols=72 Identities=14% Similarity=0.040 Sum_probs=38.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++........++. . |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 51 a~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 51 ASAYAKAGATIVFNDIN--QELVDRGMAAYKAAGINAHGYV-C-DVTD-EDGIQAMVAQIESEV-GIIDILVNNAGII 122 (291)
T ss_dssp HHHHHHTTCEEEEEESS--HHHHHHHHHHHHHTTCCCEEEE-C-CTTC-HHHHHHHHHHHHHHT-CCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCeEEEEE-e-cCCC-HHHHHHHHHHHHHHc-CCCcEEEECCCcC
Confidence 34455569999888752 2222233333333222222222 1 2333 334445556676777 5799999998853
No 171
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=39.76 E-value=30 Score=31.33 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=27.4
Q ss_pred EEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 79 AFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 79 ~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.+++.+|+|-+..-..++.+....++||++||....
T Consensus 361 VldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~ 396 (637)
T 4gqb_A 361 LMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN 396 (637)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH
T ss_pred EEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence 456788888887666777777677789999998654
No 172
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.58 E-value=1.3e+02 Score=23.24 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=39.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC---CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP---NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++.+... ...++ +. |-.. ......+..++.+++ +.+|.+|..+|.
T Consensus 23 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~iD~lv~nAg~ 96 (280)
T 1xkq_A 23 AILFAQEGANVTITGRS--SERLEETRQIILKSGVSEKQVNSV-VA-DVTT-EDGQDQIINSTLKQF-GKIDVLVNNAGA 96 (280)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTCCGGGEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCcceEEE-Ee-cCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence 44556679999988753 2222233333332221 22222 22 2333 344555666777777 579999999885
Q ss_pred c
Q 027277 87 G 87 (225)
Q Consensus 87 G 87 (225)
.
T Consensus 97 ~ 97 (280)
T 1xkq_A 97 A 97 (280)
T ss_dssp C
T ss_pred C
Confidence 3
No 173
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=39.10 E-value=1.3e+02 Score=23.04 Aligned_cols=72 Identities=21% Similarity=0.265 Sum_probs=40.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh--CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR--TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+. .....++ +. |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 30 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 103 (267)
T 1iy8_A 30 AVRLAAEGAKLSLVDVS--SEGLEASKAAVLETAPDAEVLTT-VA-DVSD-EAQVEAYVTATTERF-GRIDGFFNNAGIE 103 (267)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHCTTCCEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhcCCceEEEE-Ec-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 34455679999988753 22222333333333 2233332 22 2333 344455666777777 5799999998854
No 174
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=39.09 E-value=56 Score=25.24 Aligned_cols=42 Identities=12% Similarity=0.294 Sum_probs=29.5
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
..+++++- +.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 177 ~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 222 (291)
T 3egc_A 177 AIKVLTGA-DRPTALLTS--SHRITEGAMQALNVLGLRYGPDVEIVSFD 222 (291)
T ss_dssp HHHHHTC--CCCSEEEES--SHHHHHHHHHHHHHHTCCBTTTBEEEEES
T ss_pred HHHHHhCC-CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEec
Confidence 34555443 569999974 5567779999999876 357888885
No 175
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=38.71 E-value=53 Score=25.53 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=26.0
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 186 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D 223 (294)
T 3qk7_A 186 VPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYD 223 (294)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEET
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeec
Confidence 468999975 5567779999999876 357888885
No 176
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=38.52 E-value=95 Score=23.80 Aligned_cols=72 Identities=21% Similarity=0.186 Sum_probs=38.6
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.++... ...+...++.++.+...++ + .|-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 27 ia~~l~~~G~~V~~~~r~~---~~~~~~~~l~~~~~~~~~~-~-~D~~~-~~~v~~~~~~~~~~~-g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 27 IAQAMHREGAELAFTYQND---KLKGRVEEFAAQLGSDIVL-Q-CDVAE-DASIDTMFAELGKVW-PKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHTTCEEEEEESST---TTHHHHHHHHHHTTCCCEE-E-CCTTC-HHHHHHHHHHHHTTC-SSEEEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEcCcH---HHHHHHHHHHHhcCCcEEE-E-ccCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 3455566799999887532 1222333444433222222 1 12223 233444555666666 5799999999854
No 177
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=38.52 E-value=1.2e+02 Score=23.13 Aligned_cols=72 Identities=15% Similarity=0.166 Sum_probs=40.3
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.+.... +..+...++.++.+...++. . |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 26 ia~~l~~~G~~V~~~~r~~---~~~~~~~~l~~~~~~~~~~~-~-D~~~-~~~v~~~~~~~~~~~-g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 26 IAAKLKEAGAEVALSYQAE---RLRPEAEKLAEALGGALLFR-A-DVTQ-DEELDALFAGVKEAF-GGLDYLVHAIAFA 97 (261)
T ss_dssp HHHHHHHHTCEEEEEESCG---GGHHHHHHHHHHTTCCEEEE-C-CTTC-HHHHHHHHHHHHHHH-SSEEEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEcCCH---HHHHHHHHHHHhcCCcEEEE-C-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 3445555699999887532 22233344444432332222 1 2333 334445556777777 5799999999864
No 178
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=38.48 E-value=1.3e+02 Score=22.79 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=38.6
Q ss_pred HHHHH-cCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 11 IILRA-LGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 11 ~~~~~-~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
+.+.. .|++|+.+... .+...+...++........++. .|... ......+..++.++. +.+|.||..+|..
T Consensus 22 ~~L~~~~g~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~--~Dl~~-~~~~~~~~~~~~~~~-g~id~li~~Ag~~ 93 (276)
T 1wma_A 22 RDLCRLFSGDVVLTARD--VTRGQAAVQQLQAEGLSPRFHQ--LDIDD-LQSIRALRDFLRKEY-GGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHHHSSSEEEEEESS--HHHHHHHHHHHHHTTCCCEEEE--CCTTC-HHHHHHHHHHHHHHH-SSEEEEEECCCCC
T ss_pred HHHHHhcCCeEEEEeCC--hHHHHHHHHHHHhcCCeeEEEE--CCCCC-HHHHHHHHHHHHHhc-CCCCEEEECCccc
Confidence 34445 89999988752 2333333333333222222222 12333 334455566777777 5799999998754
No 179
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=38.42 E-value=1.3e+02 Score=23.05 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=38.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+......++. . |... ......+..++.++. +.+|.||..+|..
T Consensus 48 a~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~-Dl~~-~~~v~~~~~~~~~~~-g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 48 AYEFAKLKSKLVLWDIN--KHGLEETAAKCKGLGAKVHTFV-V-DCSN-REDIYSSAKKVKAEI-GDVSILVNNAGVV 119 (272)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEE-C-CTTC-HHHHHHHHHHHHHHT-CCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEEcC--HHHHHHHHHHHHhcCCeEEEEE-e-eCCC-HHHHHHHHHHHHHHC-CCCcEEEECCCcC
Confidence 34455679999888753 2222222333332222233322 2 2333 334455556666666 5799999999854
No 180
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=38.38 E-value=1.6e+02 Score=23.98 Aligned_cols=84 Identities=17% Similarity=0.111 Sum_probs=46.7
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHH------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVK------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
-.+.++.+|++|+.+++...-+.+.+ ...++.++- +...+.--.++.+ ...+..++++++ +++.+++
T Consensus 180 vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~a-DvV~l~~P~t~~t----~~li~~~~l~~m--k~gailI 252 (335)
T 2g76_A 180 VATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLC-DFITVHTPLLPST----TGLLNDNTFAQC--KKGVRVV 252 (335)
T ss_dssp HHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGC-SEEEECCCCCTTT----TTSBCHHHHTTS--CTTEEEE
T ss_pred HHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcC-CEEEEecCCCHHH----HHhhCHHHHhhC--CCCcEEE
Confidence 34567789999998886432211111 122344443 4554432222222 222335677777 4788999
Q ss_pred ecCcchhHH--HHHHHHHh
Q 027277 83 GIGTGGTVT--GAGRFLKE 99 (225)
Q Consensus 83 ~~G~Gg~~a--Gi~~~~k~ 99 (225)
-+|.|+..- .+..+++.
T Consensus 253 N~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 253 NCARGGIVDEGALLRALQS 271 (335)
T ss_dssp ECSCTTSBCHHHHHHHHHH
T ss_pred ECCCccccCHHHHHHHHHh
Confidence 999988664 55666654
No 181
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=38.20 E-value=1.3e+02 Score=22.89 Aligned_cols=72 Identities=13% Similarity=0.156 Sum_probs=40.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR-TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++.+. .....++. . |... ......+..++.+++ +.+|.+|..+|..
T Consensus 24 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~-~-D~~~-~~~~~~~~~~~~~~~-g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 24 AEGFAKEGAHIVLVARQ--VDRLHEAARSLKEKFGVRVLEVA-V-DVAT-PEGVDAVVESVRSSF-GGADILVNNAGTG 96 (263)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEEE-C-CTTS-HHHHHHHHHHHHHHH-SSCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC--HHHHHHHHHHHHHhcCCceEEEE-c-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679999988753 22222333333332 22333332 2 2333 344455566777777 5799999999854
No 182
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=37.97 E-value=1.3e+02 Score=22.86 Aligned_cols=73 Identities=14% Similarity=0.068 Sum_probs=39.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.... ......+. |-.. ......+..++.+++.+.+|.+|..+|..
T Consensus 26 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-D~~~-~~~~~~~~~~~~~~~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 26 VEELASLGASVYTCSRN--QKELNDCLTQWRSKG-FKVEASVC-DLSS-RSERQELMNTVANHFHGKLNILVNNAGIV 98 (260)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEEC-CTTC-HHHHHHHHHHHHHHTTTCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcC-CcEEEEEc-CCCC-HHHHHHHHHHHHHHcCCCCCEEEECCCCC
Confidence 34555679999988753 222223333333322 32222222 2333 33445555666666635799999999854
No 183
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.41 E-value=1.5e+02 Score=23.29 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=38.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC---CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP---NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++.+... ...++ +. |-.. ......+..++.+++ +.+|.+|..+|.
T Consensus 43 a~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAG~ 116 (297)
T 1xhl_A 43 AVIFAKEGAQVTITGRN--EDRLEETKQQILKAGVPAEKINAV-VA-DVTE-ASGQDDIINTTLAKF-GKIDILVNNAGA 116 (297)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCGGGEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCCCceEEEE-ec-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCc
Confidence 34455668998888752 2222233333333221 22222 22 2333 344455666777777 579999999885
Q ss_pred c
Q 027277 87 G 87 (225)
Q Consensus 87 G 87 (225)
.
T Consensus 117 ~ 117 (297)
T 1xhl_A 117 N 117 (297)
T ss_dssp C
T ss_pred C
Confidence 3
No 184
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=37.25 E-value=1.3e+02 Score=22.56 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=38.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.+.... .+...+...++........++ +. |... ......+..++.+++ +.+|.||..+|.
T Consensus 24 a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~id~vi~~Ag~ 95 (258)
T 3afn_B 24 ARLFARAGAKVGLHGRKA-PANIDETIASMRADGGDAAFF-AA-DLAT-SEACQQLVDEFVAKF-GGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHTTCEEEEEESSC-CTTHHHHHHHHHHTTCEEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SSCSEEEECCCC
T ss_pred HHHHHHCCCEEEEECCCc-hhhHHHHHHHHHhcCCceEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 344556799998887531 112222233333322122222 22 2333 334455566777777 579999999885
No 185
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=37.24 E-value=54 Score=25.23 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=25.3
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEeC
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 111 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe~ 111 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+-
T Consensus 199 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 237 (296)
T 3brq_A 199 AKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFDD 237 (296)
T ss_dssp -CCSEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEeecC
Confidence 458999875 4566779999998875 3567888753
No 186
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=37.23 E-value=1.9e+02 Score=24.34 Aligned_cols=83 Identities=13% Similarity=0.217 Sum_probs=51.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhC-CCccEEEEecCcch
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG-GKVDAFIAGIGTGG 88 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~-~~~d~iv~~~G~Gg 88 (225)
.+.++..|.+|+.++.. .+..+.++ +. +...+. .|+.. .|++++.+ ...|.||++++.-.
T Consensus 20 a~~L~~~g~~vvvId~d---~~~v~~~~----~~-g~~vi~--GDat~---------~~~L~~agi~~A~~viv~~~~~~ 80 (413)
T 3l9w_A 20 GRLLLSSGVKMVVLDHD---PDHIETLR----KF-GMKVFY--GDATR---------MDLLESAGAAKAEVLINAIDDPQ 80 (413)
T ss_dssp HHHHHHTTCCEEEEECC---HHHHHHHH----HT-TCCCEE--SCTTC---------HHHHHHTTTTTCSEEEECCSSHH
T ss_pred HHHHHHCCCCEEEEECC---HHHHHHHH----hC-CCeEEE--cCCCC---------HHHHHhcCCCccCEEEECCCChH
Confidence 45667778888888742 23322222 22 221111 23332 24555553 35899999999877
Q ss_pred hHHHHHHHHHhhCCCcEEEEEeC
Q 027277 89 TVTGAGRFLKEKNPNIKVYGIEP 111 (225)
Q Consensus 89 ~~aGi~~~~k~~~~~~~vigVe~ 111 (225)
.-.=+....|.++|+.+|++-.-
T Consensus 81 ~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 81 TNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHHhCCCCeEEEEEC
Confidence 66677888899999999887643
No 187
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=36.95 E-value=1.5e+02 Score=24.03 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=49.2
Q ss_pred HHHHHHcCCEEEEeCCCC-ChHHHHH------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 10 RIILRALGAEVYLADPAV-GFEGFVK------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~-~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
.+.++.+|++|+.+++.. ..+...+ ...++.++- +...++--.++.+ +..+..|.++++ ++..+++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~a-DvV~l~~P~t~~t----~~li~~~~l~~m--k~gailI 233 (330)
T 4e5n_A 161 ADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASS-DFILLALPLNADT----LHLVNAELLALV--RPGALLV 233 (330)
T ss_dssp HHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHC-SEEEECCCCSTTT----TTCBCHHHHTTS--CTTEEEE
T ss_pred HHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhC-CEEEEcCCCCHHH----HHHhCHHHHhhC--CCCcEEE
Confidence 455678999999998643 2211111 123445554 5555543222322 233456778888 4789999
Q ss_pred ecCcchhH--HHHHHHHHh
Q 027277 83 GIGTGGTV--TGAGRFLKE 99 (225)
Q Consensus 83 ~~G~Gg~~--aGi~~~~k~ 99 (225)
-+|.|+.. ..+..+++.
T Consensus 234 N~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 234 NPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp ECSCGGGBCHHHHHHHHHH
T ss_pred ECCCCchhCHHHHHHHHHh
Confidence 99999875 455556654
No 188
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=36.86 E-value=98 Score=25.05 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=21.8
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.+|.|| .+||=||+.-++.++.....++.+ ++=|.|.
T Consensus 80 ~~d~vv-v~GGDGTv~~v~~~l~~~~~~~pl-~iIP~GT 116 (337)
T 2qv7_A 80 NYDVLI-AAGGDGTLNEVVNGIAEKPNRPKL-GVIPMGT 116 (337)
T ss_dssp TCSEEE-EEECHHHHHHHHHHHTTCSSCCEE-EEEECSS
T ss_pred CCCEEE-EEcCchHHHHHHHHHHhCCCCCcE-EEecCCc
Confidence 356544 466767777777777443444544 4445555
No 189
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=36.83 E-value=1.3e+02 Score=22.59 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=40.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+.+.++.+......++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 21 a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~id~lv~nAg~~ 93 (246)
T 2uvd_A 21 AIDLAKQGANVVVNYAG-NEQKANEVVDEIKKLGSDAIAV-RA-DVAN-AEDVTNMVKQTVDVF-GQVDILVNNAGVT 93 (246)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC-CHHHHHHHHHHHHhcCCcEEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999988641 2222223333333322233333 22 2333 344455666777777 5799999998854
No 190
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=36.78 E-value=1.5e+02 Score=23.00 Aligned_cols=70 Identities=16% Similarity=0.077 Sum_probs=38.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. +...+.+.++.+.. ......+. |... ......+ .+..++. +.+|.+|..+|..
T Consensus 48 a~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~-~~~~~~~~-Dv~d-~~~v~~~-~~~~~~~-g~iD~lv~nAg~~ 117 (273)
T 3uf0_A 48 AHGYARAGAHVLAWGRT---DGVKEVADEIADGG-GSAEAVVA-DLAD-LEGAANV-AEELAAT-RRVDVLVNNAGII 117 (273)
T ss_dssp HHHHHHTTCEEEEEESS---THHHHHHHHHHTTT-CEEEEEEC-CTTC-HHHHHHH-HHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCH---HHHHHHHHHHHhcC-CcEEEEEe-cCCC-HHHHHHH-HHHHHhc-CCCcEEEECCCCC
Confidence 34555679999888742 23333444444332 33222222 2333 3334444 5556666 5799999998864
No 191
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=36.74 E-value=1.2e+02 Score=23.31 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=25.3
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEeC
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIEP 111 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe~ 111 (225)
.||+|||. +..+..|+..++++.+. ++.|+|.+-
T Consensus 188 ~~~ai~~~--~d~~a~g~~~al~~~G~~vP~di~vig~d~ 225 (287)
T 3bbl_A 188 RPTAIMTL--NDTMAIGAMAAARERGLTIGTDLAIIGFDD 225 (287)
T ss_dssp SCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESC
T ss_pred CCcEEEEC--CcHHHHHHHHHHHHcCCCCCCCEEEEEECC
Confidence 68998875 45677789999988753 467888753
No 192
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=36.69 E-value=51 Score=24.60 Aligned_cols=82 Identities=18% Similarity=0.163 Sum_probs=47.8
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHh-hhHHHHHHhhC-CCccEEEEecCcchhHHHHHHHHH
Q 027277 21 YLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYE-TTGPEIWNDSG-GKVDAFIAGIGTGGTVTGAGRFLK 98 (225)
Q Consensus 21 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~-t~~~Ei~~Ql~-~~~d~iv~~~G~Gg~~aGi~~~~k 98 (225)
++.+...++ ...+.+.+..++. +.-| +-. ...+|.. .-..|+.++.. ..++.||+.+|..+.+.|+..++
T Consensus 27 IimGS~SD~-~v~~~a~~~L~~~-gI~~----e~~-V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvvAa~- 98 (181)
T 4b4k_A 27 VIMGSTSDW-ETMKYACDILDEL-NIPY----EKK-VVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAK- 98 (181)
T ss_dssp EEESSGGGH-HHHHHHHHHHHHT-TCCE----EEE-ECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHTT-
T ss_pred EEECCHhHH-HHHHHHHHHHHHc-CCCe----eEE-EEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhHHhc-
Confidence 455543344 3456667777777 4211 111 1122221 01245555543 24889999999999999998774
Q ss_pred hhCCCcEEEEEeCCC
Q 027277 99 EKNPNIKVYGIEPSE 113 (225)
Q Consensus 99 ~~~~~~~vigVe~~~ 113 (225)
-...||||-+..
T Consensus 99 ---T~~PVIGVPv~s 110 (181)
T 4b4k_A 99 ---TNLPVIGVPVQS 110 (181)
T ss_dssp ---CCSCEEEEECCC
T ss_pred ---CCCCEEEEecCC
Confidence 345699996644
No 193
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=36.53 E-value=81 Score=24.35 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=25.5
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEeC
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIEP 111 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe~ 111 (225)
+.||+|||. +..+..|+..++++.+. ++.|+|.+-
T Consensus 194 ~~~~ai~~~--~d~~A~g~~~al~~~G~~vP~di~vvg~D~ 232 (289)
T 2fep_A 194 KKPTAILSA--TDEMALGIIHAAQDQGLSIPEDLDIIGFDN 232 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCCeEEEEECC
Confidence 358998875 45567788999988753 477888753
No 194
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=36.50 E-value=74 Score=25.52 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=27.0
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
.+++++ .+.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 230 ~~ll~~-~~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvGfD 274 (349)
T 1jye_A 230 MQMLNE-GIVPTAMLVA--NDQMALGAMRAITESGLRVGADISVVGYD 274 (349)
T ss_dssp HHHHHT-TCCCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEECSB
T ss_pred HHHHhC-CCCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCcEEEEEEC
Confidence 344443 2468998876 45567788999988753 45666653
No 195
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=36.40 E-value=1.4e+02 Score=23.00 Aligned_cols=34 Identities=12% Similarity=0.270 Sum_probs=23.3
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhCC--CcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKNP--NIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~~--~~~vigVe 110 (225)
+.||+|||. +.....|+..++++.+. ++.|+|.+
T Consensus 186 ~~~~ai~~~--~d~~a~g~~~al~~~g~~~di~vig~d 221 (305)
T 3g1w_A 186 PNLAGIFAT--EANGGVGVGDAVRLESRAGEIQIISFD 221 (305)
T ss_dssp TTEEEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEES
T ss_pred CCceEEEEC--CCcchhhHHHHHHhcCCCCCeEEEEeC
Confidence 457887765 44456688888887764 57777774
No 196
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=36.32 E-value=1.7e+02 Score=23.75 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHH------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEE
Q 027277 8 ERRIILRALGAEVYLADPAVGFEGFVK------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFI 81 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~~~~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv 81 (225)
.-.+.++.+|++|+.+++... +...+ ...++.++- +...++--.++. -+.-+..|.+++| ++++++
T Consensus 155 ~va~~~~~fg~~v~~~d~~~~-~~~~~~~~~~~~l~ell~~s-Divslh~Plt~~----T~~li~~~~l~~m--k~~a~l 226 (334)
T 3kb6_A 155 RVAMYGLAFGMKVLCYDVVKR-EDLKEKGCVYTSLDELLKES-DVISLHVPYTKE----THHMINEERISLM--KDGVYL 226 (334)
T ss_dssp HHHHHHHHTTCEEEEECSSCC-HHHHHTTCEECCHHHHHHHC-SEEEECCCCCTT----TTTCBCHHHHHHS--CTTEEE
T ss_pred HHHHhhcccCceeeecCCccc-hhhhhcCceecCHHHHHhhC-CEEEEcCCCChh----hccCcCHHHHhhc--CCCeEE
Confidence 345677899999999986432 11111 123455554 555554222333 2456777888999 478999
Q ss_pred EecCcchhH--HHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 82 AGIGTGGTV--TGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 82 ~~~G~Gg~~--aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
+-+|-|+.+ ..+..+++. ....=.+.++...
T Consensus 227 IN~aRG~iVde~aL~~aL~~--g~i~gA~LDV~~~ 259 (334)
T 3kb6_A 227 INTARGKVVDTDALYRAYQR--GKFSGLGLDVFED 259 (334)
T ss_dssp EECSCGGGBCHHHHHHHHHT--TCEEEEEESCCTT
T ss_pred EecCccccccHHHHHHHHHh--CCceEEEEeCCCC
Confidence 999999988 666777764 3344445555443
No 197
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=36.15 E-value=1.4e+02 Score=22.65 Aligned_cols=72 Identities=14% Similarity=0.008 Sum_probs=38.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.+......++ +. +... ......+..++.+++ +.+|.+|..+|..
T Consensus 31 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 31 ARRLAQDGAHVVVSSRK--QENVDRTVATLQGEGLSVTGT-VC-HVGK-AEDRERLVAMAVNLH-GGVDILVSNAAVN 102 (260)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCceEEE-Ec-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34455679999888753 222223333443332222222 22 2223 333445556676777 5799999998853
No 198
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=35.26 E-value=63 Score=24.16 Aligned_cols=44 Identities=20% Similarity=0.319 Sum_probs=33.2
Q ss_pred HHHHHhhCC-CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 67 PEIWNDSGG-KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 67 ~Ei~~Ql~~-~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.|+.++... ..+.||+..|.-+.+.|+..++- ...||||-+...
T Consensus 58 ~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~ 102 (183)
T 1o4v_A 58 FEYAKNAEERGIEVIIAGAGGAAHLPGMVASIT----HLPVIGVPVKTS 102 (183)
T ss_dssp HHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCT
T ss_pred HHHHHHHHhCCCcEEEEecCcccccHHHHHhcc----CCCEEEeeCCCC
Confidence 466666532 37899999999999999998873 356999976554
No 199
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=35.14 E-value=1.7e+02 Score=23.25 Aligned_cols=35 Identities=9% Similarity=0.070 Sum_probs=23.8
Q ss_pred cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 78 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 78 d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
+.|+. ..+|-+-.+++.+.+.++ .+++.+-|...+
T Consensus 68 ~~vv~-assGN~g~alA~~a~~~G--~~~~iv~p~~~~ 102 (313)
T 2q3b_A 68 TIILE-PTSGNTGIALAMVCAARG--YRCVLTMPETMS 102 (313)
T ss_dssp CEEEE-ECSSHHHHHHHHHHHHHT--CEEEEEEETTSC
T ss_pred CEEEE-eCCCHHHHHHHHHHHHcC--CcEEEEECCCCC
Confidence 45555 567777778887777665 566777776643
No 200
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=34.87 E-value=44 Score=24.43 Aligned_cols=83 Identities=12% Similarity=0.115 Sum_probs=47.2
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHh-hhHHHHHHhhCC--CccEEEEecCcchhHHHHHHHH
Q 027277 21 YLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYE-TTGPEIWNDSGG--KVDAFIAGIGTGGTVTGAGRFL 97 (225)
Q Consensus 21 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~-t~~~Ei~~Ql~~--~~d~iv~~~G~Gg~~aGi~~~~ 97 (225)
++.++..++ ...+.+.+..++.+-.|-+.= .+ +|.. .-..|+.++... .++.||+..|.-+.+.|+..++
T Consensus 7 Iimgs~SD~-~v~~~a~~~l~~~gi~~ev~V-~s-----aHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~LpgvvA~~ 79 (159)
T 3rg8_A 7 ILMGSSSDM-GHAEKIASELKTFGIEYAIRI-GS-----AHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFVDGF 79 (159)
T ss_dssp EEESSGGGH-HHHHHHHHHHHHTTCEEEEEE-CC-----TTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHHHHH
T ss_pred EEECcHHHH-HHHHHHHHHHHHcCCCEEEEE-Ec-----ccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHHHhc
Confidence 344443333 345566666677732232210 11 1111 112355444422 4899999999999999999887
Q ss_pred HhhCCCcEEEEEeCCCC
Q 027277 98 KEKNPNIKVYGIEPSES 114 (225)
Q Consensus 98 k~~~~~~~vigVe~~~~ 114 (225)
- ...||||-+...
T Consensus 80 t----~~PVIgVP~~~~ 92 (159)
T 3rg8_A 80 V----KGATIACPPPSD 92 (159)
T ss_dssp S----SSCEEECCCCCC
T ss_pred c----CCCEEEeeCCCC
Confidence 4 356999966543
No 201
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=34.86 E-value=1.5e+02 Score=22.51 Aligned_cols=73 Identities=12% Similarity=-0.016 Sum_probs=38.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... .+...+...++.+......++ +. |... ......+..++.+++++.+|.||..+|..
T Consensus 31 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 31 VEEFAGFGAVIHTCARN--EYELNECLSKWQKKGFQVTGS-VC-DASL-RPEREKLMQTVSSMFGGKLDILINNLGAI 103 (266)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTS-HHHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCeeEEE-EC-CCCC-HHHHHHHHHHHHHHhCCCCcEEEECCCCC
Confidence 34455679999988753 222223333333322223322 22 2333 33344455566666645799999998864
No 202
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=34.85 E-value=1.4e+02 Score=23.03 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=40.0
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.+..... ..+...++.++.+...++ + .|... ......+..++.+++ +.+|.+|..+|..
T Consensus 24 ~a~~l~~~G~~V~~~~r~~~---~~~~~~~l~~~~~~~~~~-~-~D~~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 95 (275)
T 2pd4_A 24 IAQSCFNQGATLAFTYLNES---LEKRVRPIAQELNSPYVY-E-LDVSK-EEHFKSLYNSVKKDL-GSLDFIVHSVAFA 95 (275)
T ss_dssp HHHHHHTTTCEEEEEESSTT---THHHHHHHHHHTTCCCEE-E-CCTTC-HHHHHHHHHHHHHHT-SCEEEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCcEEE-E-cCCCC-HHHHHHHHHHHHHHc-CCCCEEEECCccC
Confidence 34455667999998875432 222334444433222222 1 12333 334455556676666 5799999999864
No 203
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=34.81 E-value=60 Score=25.14 Aligned_cols=34 Identities=6% Similarity=0.083 Sum_probs=25.1
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 196 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 233 (293)
T 2iks_A 196 PMPQALFTT--SFALLQGVMDVTLRRDGKLPSDLAIATFG 233 (293)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHHHSSCCSSCEEEEES
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 458999875 4556778889998764 357788874
No 204
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=34.62 E-value=1.7e+02 Score=23.18 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=39.3
Q ss_pred HHHHHHcCCEEEEeCCCC---------ChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 10 RIILRALGAEVYLADPAV---------GFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~---------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
.+.+...|++|+.++... ...+..+...+..++.+......+. |... ......+..++.+++ +.+|.+
T Consensus 63 a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~l 139 (317)
T 3oec_A 63 AVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQA-DVRD-LASLQAVVDEALAEF-GHIDIL 139 (317)
T ss_dssp HHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEE
T ss_pred HHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC-CCCC-HHHHHHHHHHHHHHc-CCCCEE
Confidence 344556688888775320 0122222222222332232222222 2333 344556667777777 579999
Q ss_pred EEecCcc
Q 027277 81 IAGIGTG 87 (225)
Q Consensus 81 v~~~G~G 87 (225)
|..+|..
T Consensus 140 VnnAg~~ 146 (317)
T 3oec_A 140 VSNVGIS 146 (317)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9998854
No 205
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=34.53 E-value=78 Score=25.51 Aligned_cols=34 Identities=15% Similarity=0.316 Sum_probs=25.1
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 267 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD 304 (366)
T 3h5t_A 267 PDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFD 304 (366)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 468998875 4456678888998875 357788875
No 206
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=34.17 E-value=1.8e+02 Score=23.17 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=41.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC--CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP--NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+..+ .+...+...++..... ...++ +. |-.. ......+..++.++. +.+|.+|..+|.+
T Consensus 25 a~~l~~~G~~Vv~~~r~--~~~~~~~~~~l~~~~~~~~~~~~-~~-Dl~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 98 (319)
T 3ioy_A 25 VRQLLNQGCKVAIADIR--QDSIDKALATLEAEGSGPEVMGV-QL-DVAS-REGFKMAADEVEARF-GPVSILCNNAGVN 98 (319)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCGGGEEEE-EC-CTTC-HHHHHHHHHHHHHHT-CCEEEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCCeEEEE-EC-CCCC-HHHHHHHHHHHHHhC-CCCCEEEECCCcC
Confidence 44555679999988753 2333333334433322 22322 22 3333 345556666777776 5799999999853
No 207
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=34.17 E-value=85 Score=25.90 Aligned_cols=84 Identities=13% Similarity=0.020 Sum_probs=47.0
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHH-------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVK-------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFI 81 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~-------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv 81 (225)
-.+.++.+|++|+.+++....+.+.+ ...++.++- +...++--.++.+ ...+..+.++++ +++.++
T Consensus 175 vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~a-DiV~l~~Plt~~t----~~li~~~~l~~m--k~gail 247 (352)
T 3gg9_A 175 VAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQS-DVLSVHLRLNDET----RSIITVADLTRM--KPTALF 247 (352)
T ss_dssp HHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHC-SEEEECCCCSTTT----TTCBCHHHHTTS--CTTCEE
T ss_pred HHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhC-CEEEEeccCcHHH----HHhhCHHHHhhC--CCCcEE
Confidence 34567889999999885310000000 122344443 4544432222222 223445677777 478899
Q ss_pred EecCcchhH--HHHHHHHHh
Q 027277 82 AGIGTGGTV--TGAGRFLKE 99 (225)
Q Consensus 82 ~~~G~Gg~~--aGi~~~~k~ 99 (225)
+-+|.|+.. ..+..++++
T Consensus 248 IN~aRg~~vd~~aL~~aL~~ 267 (352)
T 3gg9_A 248 VNTSRAELVEENGMVTALNR 267 (352)
T ss_dssp EECSCGGGBCTTHHHHHHHH
T ss_pred EECCCchhhcHHHHHHHHHh
Confidence 999998876 456666665
No 208
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=34.09 E-value=80 Score=23.71 Aligned_cols=34 Identities=18% Similarity=0.406 Sum_probs=26.0
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC-CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~-~~~~vigVe 110 (225)
.+||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 171 ~~~~ai~~~--~d~~A~g~~~al~~~g~~di~vig~d 205 (255)
T 1byk_A 171 PETTALLCA--TDTLALGASKYLQEQRIDTLQLASVG 205 (255)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCSCEEEEEC
T ss_pred CCCCEEEEe--ChHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 358999875 4567789999998876 468888874
No 209
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=34.05 E-value=1.5e+02 Score=22.48 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=38.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+.+.++ .+...++. . |... ......+..++.++. +.+|.+|..+|.
T Consensus 25 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~---~~~~~~~~-~-D~~~-~~~v~~~~~~~~~~~-g~id~lv~~Ag~ 92 (259)
T 4e6p_A 25 AEAYVREGATVAIADID--IERARQAAAEI---GPAAYAVQ-M-DVTR-QDSIDAAIAATVEHA-GGLDILVNNAAL 92 (259)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH---CTTEEEEE-C-CTTC-HHHHHHHHHHHHHHS-SSCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHh---CCCceEEE-e-eCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCc
Confidence 34556679999988752 22222222222 11233332 2 2333 344555666777777 579999999985
No 210
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=33.87 E-value=75 Score=24.50 Aligned_cols=40 Identities=15% Similarity=0.287 Sum_probs=26.3
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEe
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIE 110 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe 110 (225)
.+++++- ++||+|||.... ..|+..++++.+. ++.|+|.+
T Consensus 192 ~~~l~~~-~~~~ai~~~~d~---a~g~~~al~~~g~~di~vig~d 232 (304)
T 3gbv_A 192 DDFFREH-PDVKHGITFNSK---VYIIGEYLQQRRKSDFSLIGYD 232 (304)
T ss_dssp HHHHHHC-TTCCEEEESSSC---THHHHHHHHHTTCCSCEEEEES
T ss_pred HHHHHhC-CCeEEEEEcCcc---hHHHHHHHHHcCCCCcEEEEeC
Confidence 3444433 468888877644 4578888888763 67777774
No 211
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=33.71 E-value=1.5e+02 Score=22.32 Aligned_cols=73 Identities=16% Similarity=0.050 Sum_probs=39.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+...++.+......++ +. |... ......+..++.+++ +.+|.||..+|..
T Consensus 24 a~~l~~~G~~V~~~~r~-~~~~~~~~~~~l~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~id~li~~Ag~~ 96 (261)
T 1gee_A 24 AIRFATEKAKVVVNYRS-KEDEANSVLEEIKKVGGEAIAV-KG-DVTV-ESDVINLVQSAIKEF-GKLDVMINNAGLE 96 (261)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTCEEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC-ChHHHHHHHHHHHhcCCceEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34555679999988751 2222223333333322122222 22 2333 334445556777777 4799999998854
No 212
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=33.67 E-value=65 Score=24.53 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=23.5
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
+.||+||| .+..+..|+..++++.+. ++.|+|.+
T Consensus 179 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d 216 (276)
T 2h0a_A 179 SPPLNVFA--GADQVALGVLEEAVRLGLTPGRDVRVLGFD 216 (276)
T ss_dssp CSSEEEEC--SSHHHHHHHHHHHHTTSCTTTTSEEEEEES
T ss_pred CCCCEEEE--CCcHHHHHHHHHHHHcCCCCCCCeEEEEeC
Confidence 45888884 356677788888887753 45677763
No 213
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=33.59 E-value=1.5e+02 Score=23.90 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=44.1
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcch
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGG 88 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg 88 (225)
-++.++.+||+|+.+..+ ++..+.++++- -...++. .+ . ...++.+.-+..+|.+|-++|+..
T Consensus 167 a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lG----a~~vi~~-~~--~-------~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 167 ATQIAKAYGLRVITTASR---NETIEWTKKMG----ADIVLNH-KE--S-------LLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp HHHHHHHTTCEEEEECCS---HHHHHHHHHHT----CSEEECT-TS--C-------HHHHHHHHTCCCEEEEEESSCHHH
T ss_pred HHHHHHHcCCEEEEEeCC---HHHHHHHHhcC----CcEEEEC-Cc--c-------HHHHHHHhCCCCccEEEECCCchH
Confidence 356778999999988753 34445554432 1233332 11 1 122333322235999999998765
Q ss_pred hHHHHHHHHHhhCCCcEEEEE
Q 027277 89 TVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 89 ~~aGi~~~~k~~~~~~~vigV 109 (225)
++.- .++.+.+.-+++.+
T Consensus 230 ~~~~---~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 230 YYDD---MIQLVKPRGHIATI 247 (346)
T ss_dssp HHHH---HHHHEEEEEEEEES
T ss_pred HHHH---HHHHhccCCEEEEE
Confidence 4433 34444455566554
No 214
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=33.53 E-value=1.8e+02 Score=23.19 Aligned_cols=84 Identities=23% Similarity=0.177 Sum_probs=48.4
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHH------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVK------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
-.+.++.+|++|+.+++...-+.+.+ ...++.++- +...++-..++.+ ...+..+.++++ +++.+++
T Consensus 157 ~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~a-DvV~l~~p~~~~t----~~li~~~~l~~m--k~ga~li 229 (307)
T 1wwk_A 157 VAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKES-DVVTIHVPLVEST----YHLINEERLKLM--KKTAILI 229 (307)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHC-SEEEECCCCSTTT----TTCBCHHHHHHS--CTTCEEE
T ss_pred HHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhC-CEEEEecCCChHH----hhhcCHHHHhcC--CCCeEEE
Confidence 34567889999999986432211111 122444444 5555542222222 223345677777 4688999
Q ss_pred ecCcchhHH--HHHHHHHh
Q 027277 83 GIGTGGTVT--GAGRFLKE 99 (225)
Q Consensus 83 ~~G~Gg~~a--Gi~~~~k~ 99 (225)
-+|.|+..- .+..+++.
T Consensus 230 n~arg~~vd~~aL~~aL~~ 248 (307)
T 1wwk_A 230 NTSRGPVVDTNALVKALKE 248 (307)
T ss_dssp ECSCGGGBCHHHHHHHHHH
T ss_pred ECCCCcccCHHHHHHHHHh
Confidence 999988753 66666665
No 215
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=33.48 E-value=95 Score=26.54 Aligned_cols=46 Identities=20% Similarity=0.115 Sum_probs=34.9
Q ss_pred HHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC-CcEEEEEeCCCC
Q 027277 68 EIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIEPSES 114 (225)
Q Consensus 68 Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~-~~~vigVe~~~~ 114 (225)
+++++++ .+..+=+..|+|.+++.|.++++...+ ..+++.||++..
T Consensus 131 ~~~~~~g-~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~ 177 (432)
T 4f3n_A 131 QALDASG-TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGE 177 (432)
T ss_dssp HHHHHHT-CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSS
T ss_pred HHHHhcC-CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHH
Confidence 5566664 566777788899999999999988653 348899998654
No 216
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=33.36 E-value=1.3e+02 Score=24.71 Aligned_cols=94 Identities=10% Similarity=0.107 Sum_probs=54.3
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHH------HHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEGF------VKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~------~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
-.+.++.+|++|+.+++...-.+. .....++.++- +...++--.++. -+..+..+.++++ ++.++++
T Consensus 188 vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~s-DvV~l~~Plt~~----T~~li~~~~l~~m--k~gailI 260 (345)
T 4g2n_A 188 IATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGAS-DIFLIAAPGRPE----LKGFLDHDRIAKI--PEGAVVI 260 (345)
T ss_dssp HHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTC-SEEEECSCCCGG----GTTCBCHHHHHHS--CTTEEEE
T ss_pred HHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhC-CEEEEecCCCHH----HHHHhCHHHHhhC--CCCcEEE
Confidence 346678999999999864211111 01223444544 555554222222 2344556788888 4789999
Q ss_pred ecCcchhH--HHHHHHHHhhCCCcEEEEEeC
Q 027277 83 GIGTGGTV--TGAGRFLKEKNPNIKVYGIEP 111 (225)
Q Consensus 83 ~~G~Gg~~--aGi~~~~k~~~~~~~vigVe~ 111 (225)
-++.|+.+ ..+..+++. ....-.+.++
T Consensus 261 N~aRG~~vde~aL~~aL~~--g~i~gA~LDV 289 (345)
T 4g2n_A 261 NISRGDLINDDALIEALRS--KHLFAAGLDV 289 (345)
T ss_dssp ECSCGGGBCHHHHHHHHHH--TSEEEEEESC
T ss_pred ECCCCchhCHHHHHHHHHh--CCceEEEecC
Confidence 99999887 455566654 2334344443
No 217
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=33.28 E-value=66 Score=27.09 Aligned_cols=37 Identities=32% Similarity=0.288 Sum_probs=20.8
Q ss_pred CccEEEEecC-cchhHHHHHH----HHHhhCCCcEEEEEeCC
Q 027277 76 KVDAFIAGIG-TGGTVTGAGR----FLKEKNPNIKVYGIEPS 112 (225)
Q Consensus 76 ~~d~iv~~~G-~Gg~~aGi~~----~~k~~~~~~~vigVe~~ 112 (225)
..|.||+++| +|||=+|.+- .+|+.+..+-.+..-|.
T Consensus 111 ~~d~vfi~ag~GGGTGtGa~pvia~~~ke~~~~~~~vvt~Pf 152 (389)
T 4ei7_A 111 DRDFIWITCGLGGGTGTGALLKAIEMLYEHDYNFGLLLTLPR 152 (389)
T ss_dssp TCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CccEEEEEecCCCCCccccHHHHHHHHHHcCCCEEEEEEeCC
Confidence 5788988877 4566566544 33454443433334443
No 218
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=32.88 E-value=23 Score=21.18 Aligned_cols=25 Identities=24% Similarity=0.408 Sum_probs=20.0
Q ss_pred cCeEEEeCHHHHHHHHHHHHHhcCCe
Q 027277 144 LDEVITVSSEEAIETSKLLALKEGLL 169 (225)
Q Consensus 144 ~~~~~~v~d~e~~~a~~~l~~~eGi~ 169 (225)
.-.-|.|+.++++.+.+.|.+ .|++
T Consensus 31 ~a~kygV~kdeV~~~LrrLe~-KGLI 55 (59)
T 2xvc_A 31 FSKVYGVEKQEVVKLLEALKN-KGLI 55 (59)
T ss_dssp HHHHHCCCHHHHHHHHHHHHH-TTSE
T ss_pred HHHHhCCCHHHHHHHHHHHHH-CCCe
Confidence 345588999999999999975 4775
No 219
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=32.79 E-value=1.3e+02 Score=23.45 Aligned_cols=67 Identities=18% Similarity=0.092 Sum_probs=39.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP-NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. . +.. .++.++.+ ...++ +. |... ......+..++.++. +.+|.+|..+|.
T Consensus 22 a~~la~~G~~V~~~~r~--~-~~~---~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-g~iD~lvnnAg~ 89 (281)
T 3zv4_A 22 VDRFVAEGARVAVLDKS--A-ERL---RELEVAHGGNAVGV-VG-DVRS-LQDQKRAAERCLAAF-GKIDTLIPNAGI 89 (281)
T ss_dssp HHHHHHTTCEEEEEESC--H-HHH---HHHHHHTBTTEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEECCCCC
T ss_pred HHHHHHCcCEEEEEeCC--H-HHH---HHHHHHcCCcEEEE-Ec-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCc
Confidence 44556679999998753 2 222 22233322 23332 22 3333 345566677787887 579999999985
No 220
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=32.78 E-value=1.9e+02 Score=23.74 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=23.2
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
.+.||++ ++|-+-.+++.+.+.++- +++.|-|...+
T Consensus 93 ~~~vv~a-SsGN~g~alA~aa~~~G~--~~~iv~p~~~~ 128 (364)
T 4h27_A 93 CAHFVCS-SSGNAGMAAAYAARQLGV--PATIVVPGTTP 128 (364)
T ss_dssp CCEEEEC-CSSHHHHHHHHHHHHHTC--CEEEEEETTSC
T ss_pred CCEEEEe-CCChHHHHHHHHHHHhCC--ceEEEECCCCC
Confidence 4566654 457787888877777664 45556676653
No 221
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=32.62 E-value=76 Score=23.24 Aligned_cols=83 Identities=13% Similarity=0.187 Sum_probs=47.4
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHh-hhHHHHHHhhCC-CccEEEEecCcchhHHHHHHHHH
Q 027277 21 YLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYE-TTGPEIWNDSGG-KVDAFIAGIGTGGTVTGAGRFLK 98 (225)
Q Consensus 21 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~-t~~~Ei~~Ql~~-~~d~iv~~~G~Gg~~aGi~~~~k 98 (225)
++.++..++ ...+.+.+..++.+-.|-+.= . .+|.. .-..|+.++... ..+.||+..|.-+.+.|+..++-
T Consensus 8 Iimgs~SD~-~v~~~a~~~l~~~gi~~ev~V-~-----SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t 80 (163)
T 3ors_A 8 VIMGSSSDW-KIMQESCNMLDYFEIPYEKQV-V-----SAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLT 80 (163)
T ss_dssp EEESCGGGH-HHHHHHHHHHHHTTCCEEEEE-C-----CTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHC
T ss_pred EEECcHHHH-HHHHHHHHHHHHcCCCEEEEE-E-----CCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhcc
Confidence 445543344 334566666677732222210 1 11211 112355555533 37899999999999999998873
Q ss_pred hhCCCcEEEEEeCCCC
Q 027277 99 EKNPNIKVYGIEPSES 114 (225)
Q Consensus 99 ~~~~~~~vigVe~~~~ 114 (225)
...||||-+...
T Consensus 81 ----~~PVIgVP~~~~ 92 (163)
T 3ors_A 81 ----TLPVIGVPIETK 92 (163)
T ss_dssp ----SSCEEEEEECCT
T ss_pred ----CCCEEEeeCCCC
Confidence 356999966543
No 222
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=32.54 E-value=1.8e+02 Score=22.90 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=26.4
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEeC
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 111 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe~ 111 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+-
T Consensus 237 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~disvig~D~ 275 (340)
T 1qpz_A 237 HRPTAVFCG--GDIMAMGALCAADEMGLRVPQDVSLIGYDN 275 (340)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCCeEEEeECC
Confidence 468999985 5567779999999875 3578888853
No 223
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=32.39 E-value=1.8e+02 Score=22.62 Aligned_cols=61 Identities=10% Similarity=-0.009 Sum_probs=37.6
Q ss_pred hHHHHHHHHHcCCEEEEeCCCCC--hHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEe
Q 027277 6 SIERRIILRALGAEVYLADPAVG--FEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAG 83 (225)
Q Consensus 6 ~~~k~~~~~~~GA~v~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~ 83 (225)
+...++.+-..|++.+.++++.+ .+...+..+++.+ .+-..++-|+ |+ +|+....|++++|
T Consensus 25 ~~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~-~~~Piil~p~-~~---------------~~~~~gaD~il~p 87 (235)
T 3w01_A 25 SDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR-YPLPLVLEIS-NI---------------ESVMPGFDFYFVP 87 (235)
T ss_dssp CHHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT-SCSCEEEECC-CS---------------TTCCTTCSEEEEE
T ss_pred CHHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC-cCCCEEEecC-CH---------------HHhhcCCCEEEEc
Confidence 56677777888999999998653 3344555555443 4334555555 33 2222357888887
No 224
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=32.31 E-value=83 Score=24.15 Aligned_cols=40 Identities=15% Similarity=0.279 Sum_probs=28.5
Q ss_pred HHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 66 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 66 ~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
..+++++ .||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 180 ~~~~l~~---~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 223 (288)
T 2qu7_A 180 TKTLLSK---GIKGIVAT--NHLLLLGALQAIKESEKEIKKDVIIVGFD 223 (288)
T ss_dssp HHHHHHT---TCCEEEEC--SHHHHHHHHHHHHHSSCCBTTTBEEEEES
T ss_pred HHHHHhc---CCCEEEEC--CcHHHHHHHHHHHHhCCCCCCceEEEEeC
Confidence 3455554 68999976 45567799999988753 56788875
No 225
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=32.31 E-value=85 Score=23.97 Aligned_cols=24 Identities=17% Similarity=0.177 Sum_probs=14.1
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhC
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKN 101 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~ 101 (225)
.||+|||. +..+..|+..++++.+
T Consensus 177 ~~~ai~~~--~d~~a~g~~~al~~~g 200 (277)
T 3cs3_A 177 EPVDVFAF--NDEMAIGVYKYVAETN 200 (277)
T ss_dssp SSEEEEES--SHHHHHHHHHHHTTSS
T ss_pred CCcEEEEc--ChHHHHHHHHHHHHcC
Confidence 46666654 3445566666666654
No 226
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=32.09 E-value=78 Score=24.84 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=25.9
Q ss_pred hhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 63 ETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 63 ~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
+..+.+.++++= +++ -++.++.|.|+..++..+........+.-|+-.+.
T Consensus 47 g~~aA~~L~~~l-~~~-~vIGv~wG~Tl~~v~~~l~~~~~~~~~~~V~l~Gg 96 (266)
T 3efb_A 47 GLHGAQLLDRLL-EPG-DIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGG 96 (266)
T ss_dssp HHHHHHHHHHHC-CTT-CEEEECCSHHHHHHHHTCCCCSSCCCCEEEESBCB
T ss_pred HHHHHHHHHHhC-CCC-CEEEEcccHHHHHHHHhcCccCCCCCeEEEEcCCC
Confidence 333445555542 222 35677888888887776643321112344554444
No 227
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=31.97 E-value=1.5e+02 Score=23.43 Aligned_cols=33 Identities=6% Similarity=0.076 Sum_probs=23.5
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 239 ~~~ai~~~--~d~~A~g~~~al~~~G~~vP~disvig~D 275 (332)
T 2o20_A 239 GATSAVVS--HDTVAVGLLSAMMDKGVKVPEDFEIISGA 275 (332)
T ss_dssp TCCEEEES--CHHHHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred CCCEEEEC--ChHHHHHHHHHHHHcCCCCccCEEEEEeC
Confidence 58988875 55667788889888753 45676653
No 228
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=31.96 E-value=81 Score=23.17 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=48.7
Q ss_pred EE-EEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHh-hhHHHHHHhhCC-CccEEEEecCcchhHHHHHH
Q 027277 19 EV-YLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYE-TTGPEIWNDSGG-KVDAFIAGIGTGGTVTGAGR 95 (225)
Q Consensus 19 ~v-~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~-t~~~Ei~~Ql~~-~~d~iv~~~G~Gg~~aGi~~ 95 (225)
.| +++++..++ ...+.+.+..++.+-.|-+.= . .+|.. .-..|+.++... ..+.||+..|.-+.+.|+..
T Consensus 7 ~V~IimgS~SD~-~v~~~a~~~l~~~gi~~ev~V-~-----SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 79 (166)
T 3oow_A 7 QVGVIMGSKSDW-STMKECCDILDNLGIGYECEV-V-----SAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVA 79 (166)
T ss_dssp EEEEEESSGGGH-HHHHHHHHHHHHTTCEEEEEE-C-----CTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHH
T ss_pred eEEEEECcHHhH-HHHHHHHHHHHHcCCCEEEEE-E-----cCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHHH
Confidence 44 444543333 345666666777732222210 1 12211 113455565532 37999999999999999988
Q ss_pred HHHhhCCCcEEEEEeCCCC
Q 027277 96 FLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 96 ~~k~~~~~~~vigVe~~~~ 114 (225)
++- ...||||-+...
T Consensus 80 ~~t----~~PVIgVP~~~~ 94 (166)
T 3oow_A 80 AKT----TLPVLGVPVKSS 94 (166)
T ss_dssp HTC----SSCEEEEECCCT
T ss_pred hcc----CCCEEEeecCcC
Confidence 853 456999966443
No 229
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=31.60 E-value=2e+02 Score=23.12 Aligned_cols=97 Identities=14% Similarity=0.032 Sum_probs=55.8
Q ss_pred HHHHHHHcCCEEEEeCCCCC----hHH--HHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 9 RRIILRALGAEVYLADPAVG----FEG--FVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~----~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
-.+.++.+|++|+.+++... .+. ......++.++- +...++--.++. -+..+..+.++++ +++++++
T Consensus 154 vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~a-DiV~l~~Plt~~----t~~li~~~~l~~m--k~gailI 226 (315)
T 3pp8_A 154 VAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQT-RVLINLLPNTAQ----TVGIINSELLDQL--PDGAYVL 226 (315)
T ss_dssp HHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTC-SEEEECCCCCGG----GTTCBSHHHHTTS--CTTEEEE
T ss_pred HHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhC-CEEEEecCCchh----hhhhccHHHHhhC--CCCCEEE
Confidence 34567889999998864321 110 012334555554 565554222222 2344556778888 4789999
Q ss_pred ecCcchhH--HHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 83 GIGTGGTV--TGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 83 ~~G~Gg~~--aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
-+|.|+.+ ..+..+++. ....-.+.++...
T Consensus 227 N~aRG~~vd~~aL~~aL~~--g~i~gA~lDV~~~ 258 (315)
T 3pp8_A 227 NLARGVHVQEADLLAALDS--GKLKGAMLDVFSQ 258 (315)
T ss_dssp ECSCGGGBCHHHHHHHHHH--TSEEEEEESCCSS
T ss_pred ECCCChhhhHHHHHHHHHh--CCccEEEcCCCCC
Confidence 99999887 555666654 2344445554433
No 230
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=31.26 E-value=46 Score=26.16 Aligned_cols=53 Identities=21% Similarity=0.244 Sum_probs=29.4
Q ss_pred HhhhHHHHHHhhC-CCc--cEEEEecCcchhHHHHHHHHHhhCCCcEE--EEEeCCCC
Q 027277 62 YETTGPEIWNDSG-GKV--DAFIAGIGTGGTVTGAGRFLKEKNPNIKV--YGIEPSES 114 (225)
Q Consensus 62 ~~t~~~Ei~~Ql~-~~~--d~iv~~~G~Gg~~aGi~~~~k~~~~~~~v--igVe~~~~ 114 (225)
+.....++++.++ ..+ ..+=+.+|+|.+..-+...+....+..+| +||+++..
T Consensus 36 ~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ 93 (292)
T 2aot_A 36 MDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAE 93 (292)
T ss_dssp HHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHH
T ss_pred HHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHH
Confidence 3333445554443 123 35556677775544455555555566755 99998754
No 231
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=31.08 E-value=1.7e+02 Score=22.09 Aligned_cols=69 Identities=19% Similarity=0.096 Sum_probs=40.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++ ..... ..+. |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 23 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~---~~~~~-~~~~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 91 (247)
T 3rwb_A 23 AARLAADGATVIVSDIN--AEGAKAAAASI---GKKAR-AIAA-DISD-PGSVKALFAEIQALT-GGIDILVNNASIV 91 (247)
T ss_dssp HHHHHHTTCEEEEECSC--HHHHHHHHHHH---CTTEE-ECCC-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHh---CCceE-EEEc-CCCC-HHHHHHHHHHHHHHC-CCCCEEEECCCCC
Confidence 44566679999998853 22222222222 22333 3333 3333 345566667777777 5799999998853
No 232
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=31.05 E-value=1.8e+02 Score=22.40 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=39.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHH-HHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKK-GEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... +...+. ..++.+......++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 46 a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 46 AMELGRRGCKVIVNYANS--TESAEEVVAAIKKNGSDAACV-KA-NVGV-VEDIVRMFEEAVKIF-GKLDIVCSNSGVV 118 (283)
T ss_dssp HHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHHhCCCeEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 345556799998876532 222222 23333222223333 22 2333 344455566777777 5799999999864
No 233
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=30.87 E-value=1.7e+02 Score=21.88 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=38.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP-NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++.++.+ ...++ +. |... ......+..++.+++ +.+|.||..+|..
T Consensus 19 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-~~id~li~~Ag~~ 91 (250)
T 2cfc_A 19 ATRFLARGDRVAALDLS--AETLEETARTHWHAYADKVLRV-RA-DVAD-EGDVNAAIAATMEQF-GAIDVLVNNAGIT 91 (250)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHSTTTGGGEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEE-Ee-cCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 44556679999988753 2222222233312211 22222 22 2333 334455566777777 5799999998853
No 234
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=30.73 E-value=1.8e+02 Score=22.23 Aligned_cols=76 Identities=11% Similarity=0.033 Sum_probs=39.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCCeEEe-CCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR-TPNGYIL-GQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~-~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. +.+...+.+.++.+. .....++ -...++.........+..++.+.+ +.+|.+|..+|..
T Consensus 28 a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~-g~id~lv~nAg~~ 105 (276)
T 1mxh_A 28 AVRLHQQGFRVVVHYRH-SEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAY 105 (276)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC-ChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 34455679999988751 222233333344333 2233332 112222111144455556676777 5799999999853
No 235
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=30.52 E-value=72 Score=23.70 Aligned_cols=48 Identities=10% Similarity=-0.054 Sum_probs=33.2
Q ss_pred HHHHHhhCCCccEEEEecCcch--------------------hHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGG--------------------TVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg--------------------~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.+-++++..+||.|++..|+=- .+.-+...++...|+.+|+.+.|...
T Consensus 73 ~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~~P~~~iil~~p~~~ 140 (232)
T 3dc7_A 73 AVRYQAIPEDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTNWPTVPKLFISAIHI 140 (232)
T ss_dssp HHHGGGSCTTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHHCTTSCEEEEECCCC
T ss_pred HHHHHhcCCCCCEEEEEEeccccccCcCCccccccchHHHHHHHHHHHHHHHHhCCCCeEEEEeCccc
Confidence 3444456567999999998522 44456667777788899998876543
No 236
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=30.43 E-value=1.9e+02 Score=22.40 Aligned_cols=69 Identities=17% Similarity=0.056 Sum_probs=37.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++ .....++. .|... ......+..++.+++ +.+|.+|..+|..
T Consensus 46 a~~la~~G~~V~~~~r~--~~~~~~~~~~~---~~~~~~~~--~Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 46 ARRLADEGCHVLCADID--GDAADAAATKI---GCGAAACR--VDVSD-EQQIIAMVDACVAAF-GGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHTTCEEEEEESS--HHHHHHHHHHH---CSSCEEEE--CCTTC-HHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHc---CCcceEEE--ecCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34455668888888742 22222222222 11222222 13333 344556667777887 5799999998864
No 237
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=30.42 E-value=1.9e+02 Score=22.39 Aligned_cols=71 Identities=17% Similarity=0.206 Sum_probs=38.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR-TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+...++.+. .....++ +. |... ......+..++.++. +.+|.||..+|.
T Consensus 43 a~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dl~~-~~~~~~~~~~~~~~~-g~id~li~~Ag~ 114 (302)
T 1w6u_A 43 TTLLSSLGAQCVIASRK--MDVLKATAEQISSQTGNKVHAI-QC-DVRD-PDMVQNTVSELIKVA-GHPNIVINNAAG 114 (302)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHSSCEEEE-EC-CTTC-HHHHHHHHHHHHHHT-CSCSEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCceEEE-Ee-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34455679999888753 22222333333333 2233333 22 2333 344455556666666 579999999884
No 238
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=30.40 E-value=1.8e+02 Score=22.08 Aligned_cols=72 Identities=13% Similarity=0.167 Sum_probs=37.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+...++....+...++ +. |-.. ......+..++.++.-+.+|.+|..+|.
T Consensus 22 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~~g~id~lvnnAg~ 93 (260)
T 2qq5_A 22 ALQLCKAGATVYITGRH--LDTLRVVAQEAQSLGGQCVPV-VC-DSSQ-ESEVRSLFEQVDREQQGRLDVLVNNAYA 93 (260)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHSSEEEEE-EC-CTTS-HHHHHHHHHHHHHHHTTCCCEEEECCCT
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHcCCceEEE-EC-CCCC-HHHHHHHHHHHHHhcCCCceEEEECCcc
Confidence 34556679999988752 222233333443333222222 22 2333 3334445556655422579999999964
No 239
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=30.39 E-value=2e+02 Score=22.68 Aligned_cols=47 Identities=21% Similarity=0.282 Sum_probs=32.4
Q ss_pred HhhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 59 EIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 59 ~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
..+|. ...+++++- + ||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 217 ~~~~~-~~~~ll~~~-~-~~ai~~~--nd~~A~g~~~al~~~G~~vP~disvig~D 267 (333)
T 3jvd_A 217 ESGEE-MAQVVFNNG-L-PDALIVA--SPRLMAGVMRAFTRLNVRVPHDVVIGGYD 267 (333)
T ss_dssp HHHHH-HHHHHHHTC-C-CSEEEEC--CHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred HHHHH-HHHHHhcCC-C-CcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 44544 344666554 4 9999975 4556779999999876 357888885
No 240
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=30.38 E-value=85 Score=25.23 Aligned_cols=50 Identities=18% Similarity=0.253 Sum_probs=30.7
Q ss_pred hHhhhHHHHHHhhCCCcc--EEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 61 HYETTGPEIWNDSGGKVD--AFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 61 g~~t~~~Ei~~Ql~~~~d--~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
|...+..|+++.+...++ ++=+.+|+|+...-++ ...+..+|+||+.+..
T Consensus 10 h~pvLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la----~~~~~~~VigvD~d~~ 61 (301)
T 1m6y_A 10 HIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAIL----EHCPGCRIIGIDVDSE 61 (301)
T ss_dssp CCCTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHH----HHCTTCEEEEEESCHH
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHH----HHCCCCEEEEEECCHH
Confidence 455567788888864454 3444566666554333 3334678999987654
No 241
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=30.15 E-value=1.9e+02 Score=22.24 Aligned_cols=68 Identities=18% Similarity=0.175 Sum_probs=37.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+.. .++.++.++..++. . |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 26 a~~l~~~G~~V~~~~r~---~~~~---~~~~~~~~~~~~~~-~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 93 (270)
T 1yde_A 26 VRAFVNSGARVVICDKD---ESGG---RALEQELPGAVFIL-C-DVTQ-EDDVKTLVSETIRRF-GRLDCVVNNAGHH 93 (270)
T ss_dssp HHHHHHTTCEEEEEESC---HHHH---HHHHHHCTTEEEEE-C-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC---HHHH---HHHHHHhcCCeEEE-c-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34455679999888742 1222 22223322333332 1 2333 344455666777777 5799999998853
No 242
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=30.14 E-value=1.7e+02 Score=22.23 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=30.0
Q ss_pred hHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 65 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 65 ~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
...+++++- ++||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 168 ~~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d 214 (277)
T 3hs3_A 168 SAQSALNKS-NQFDAIITV--NDLYAAEIIKEAKRRNLKIPDDFQLVGYD 214 (277)
T ss_dssp HHHHHHHTG-GGCSEEECS--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHHHcCC-CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeeC
Confidence 445666543 469999875 45677799999998763 46777664
No 243
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=30.13 E-value=1.9e+02 Score=22.33 Aligned_cols=70 Identities=13% Similarity=-0.030 Sum_probs=34.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++... +...+...++.+..+...++ +. +... ......+..++.+ . +.+|.+|..+|.
T Consensus 50 a~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~~~~~~~~~~~-~-g~iD~lvnnAg~ 119 (275)
T 4imr_A 50 AEGLAGAGAHVILHGVKP--GSTAAVQQRIIASGGTAQEL-AG-DLSE-AGAGTDLIERAEA-I-APVDILVINASA 119 (275)
T ss_dssp HHHHHHTTCEEEEEESST--TTTHHHHHHHHHTTCCEEEE-EC-CTTS-TTHHHHHHHHHHH-H-SCCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEcCCH--HHHHHHHHHHHhcCCeEEEE-Ee-cCCC-HHHHHHHHHHHHH-h-CCCCEEEECCCC
Confidence 344556699988887532 22223333343333223222 22 1222 1223333444433 3 579999999885
No 244
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=30.07 E-value=67 Score=24.41 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=23.3
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 180 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 217 (275)
T 3d8u_A 180 SSLNALVCS--HEEIAIGALFECHRRVLKVPTDIAIICLE 217 (275)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred CCCCEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 458888865 45567788888887652 45677663
No 245
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=29.69 E-value=71 Score=25.87 Aligned_cols=82 Identities=17% Similarity=0.151 Sum_probs=45.3
Q ss_pred HHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-CccEEEEecCc
Q 027277 9 RRIILRALGA-EVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG-KVDAFIAGIGT 86 (225)
Q Consensus 9 k~~~~~~~GA-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~-~~d~iv~~~G~ 86 (225)
-++..+.+|+ +|+.++.+ +++.+.++++- -...++. .+. ....++.+..++ .+|.+|-++|+
T Consensus 182 a~qla~~~Ga~~Vi~~~~~---~~~~~~~~~lG----a~~vi~~-~~~--------~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 182 SVAGANHLGAGRIFAVGSR---KHCCDIALEYG----ATDIINY-KNG--------DIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp HHHHHHTTTCSSEEEECCC---HHHHHHHHHHT----CCEEECG-GGS--------CHHHHHHHHTTTCCEEEEEECSSC
T ss_pred HHHHHHHcCCcEEEEECCC---HHHHHHHHHhC----CceEEcC-CCc--------CHHHHHHHHcCCCCCCEEEECCCC
Confidence 3567788999 78888753 34445554432 1123332 111 123344444443 49999999988
Q ss_pred chhHHHHHHHHHhhCCCcEEEEE
Q 027277 87 GGTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 87 Gg~~aGi~~~~k~~~~~~~vigV 109 (225)
..++.- .++.+.+.-+++-+
T Consensus 246 ~~~~~~---~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 246 VHTFAQ---AVKMIKPGSDIGNV 265 (352)
T ss_dssp TTHHHH---HHHHEEEEEEEEEC
T ss_pred hHHHHH---HHHHHhcCCEEEEe
Confidence 655544 34444455566544
No 246
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=29.64 E-value=1.4e+02 Score=20.72 Aligned_cols=44 Identities=18% Similarity=0.103 Sum_probs=25.4
Q ss_pred HHHHHhhCCCcc--EEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 67 PEIWNDSGGKVD--AFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 67 ~Ei~~Ql~~~~d--~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
..+++.+...+. .+-+.+|+|... ..+....+..+|++++.+..
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~----~~l~~~~~~~~v~~vD~~~~ 60 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIA----IEWLRSTPQTTAVCFEISEE 60 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHH----HHHHTTSSSEEEEEECSCHH
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHH----HHHHHHCCCCeEEEEeCCHH
Confidence 344555543343 455566665443 33444456789999998764
No 247
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=29.61 E-value=1.6e+02 Score=23.53 Aligned_cols=39 Identities=18% Similarity=0.145 Sum_probs=23.6
Q ss_pred HHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEE
Q 027277 68 EIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGI 109 (225)
Q Consensus 68 Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigV 109 (225)
+++++- +.||+|||. +..+..|+..++++.+. ++.|+|.
T Consensus 243 ~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigf 285 (355)
T 3e3m_A 243 LILQEY-PDTDCIFCV--SDMPAFGLLSRLKSIGVAVPEQVSVVGF 285 (355)
T ss_dssp HHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEECS
T ss_pred HHHcCC-CCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEE
Confidence 444432 457887764 44566678888877652 4556654
No 248
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=29.50 E-value=42 Score=27.44 Aligned_cols=72 Identities=14% Similarity=0.089 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhc-CCeecchHHHHHHHHHHHhhcCCCC-CCEEEEEecCCCCCCcChhhchhHHHhcCCCC
Q 027277 152 SEEAIETSKLLALKE-GLLVGISSGAAAAAAIRVAKRPENA-GKLIVVIFPSAGERYLSTALFESIRHEVENMP 223 (225)
Q Consensus 152 d~e~~~a~~~l~~~e-Gi~~epssgaalaa~~~~~~~~~~~-~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~~ 223 (225)
+.++++.++.++.+. .+++.-|+|+==.+++.++.+...+ +..+.+++.+.|.....+.-|-+.+.++.|++
T Consensus 32 e~~a~~ilr~~~~~~~~ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDtg~~~~et~~~v~~~~~~~gi~ 105 (325)
T 1zun_A 32 EAESIHIIREVAAEFDNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLD 105 (325)
T ss_dssp HHHHHHHHHHHHHHCSSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHhCCCEEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence 556777788777654 5666667777666666665442111 22344444478877767777778888888875
No 249
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=29.27 E-value=44 Score=26.19 Aligned_cols=68 Identities=9% Similarity=0.004 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhc-CCeecchHHHHHHHHHHHhhcCCCCCCEEEEEecCCCCCCcChhhchhHHHhcCCC
Q 027277 155 AIETSKLLALKE-GLLVGISSGAAAAAAIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 222 (225)
Q Consensus 155 ~~~a~~~l~~~e-Gi~~epssgaalaa~~~~~~~~~~~~~~vv~v~~~gG~~~~~~~~~~~~~~~~~~~ 222 (225)
+.+-++...++. .+++.-|+|+==.+++.++.+...++.++.+++.+.|.....+.-|-+.+.++.|+
T Consensus 30 ~~~~l~~a~~~~~~v~va~SGGkDS~vLL~ll~~~~~~~~~i~vv~iDtg~~~~et~~~v~~~~~~~gl 98 (261)
T 2oq2_A 30 PQEIIAWSIVTFPHLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTLKNEIEKKYYQ 98 (261)
T ss_dssp HHHHHHHHHHHCSSEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCccCCCeeEEEecCCCCCHHHHHHHHHHHHHhCC
Confidence 344444444444 46666677777667777665432112244444448888777777777777777776
No 250
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=29.25 E-value=62 Score=23.92 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=32.5
Q ss_pred HHHHHhhCC-CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 67 PEIWNDSGG-KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 67 ~Ei~~Ql~~-~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.|+.++... ..+.||+..|.-+.+.|+..++- ...||||-+...
T Consensus 56 ~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~ 100 (170)
T 1xmp_A 56 FEYAETARERGLKVIIAGAGGAAHLPGMVAAKT----NLPVIGVPVQSK 100 (170)
T ss_dssp HHHHHHTTTTTCCEEEEEEESSCCHHHHHHTTC----CSCEEEEEECCT
T ss_pred HHHHHHHHhCCCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCC
Confidence 466666532 37899999999999999988753 456999976544
No 251
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=29.24 E-value=1.9e+02 Score=22.12 Aligned_cols=72 Identities=14% Similarity=0.169 Sum_probs=39.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR-TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... .+...+.+.++.++ .....++ +. +... ......+..++.+++ +.+|.+|..+|..
T Consensus 38 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dl~~-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 38 AQGLAEAGCSVVVASRN--LEEASEAAQKLTEKYGVETMAF-RC-DVSN-YEEVKKLLEAVKEKF-GKLDTVVNAAGIN 110 (267)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCeEEEE-Ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 34555679999988753 22223333333122 2223332 22 2333 344455566777777 5799999998854
No 252
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=29.06 E-value=2e+02 Score=22.20 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=38.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++ ++.+...++ +. |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 46 a~~L~~~G~~V~~~~r~--~~~~~~~~~~l-~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 116 (276)
T 2b4q_A 46 AQGLLEAGARVFICARD--AEACADTATRL-SAYGDCQAI-PA-DLSS-EAGARRLAQALGELS-ARLDILVNNAGTS 116 (276)
T ss_dssp HHHHHHTTCEEEEECSC--HHHHHHHHHHH-TTSSCEEEC-CC-CTTS-HHHHHHHHHHHHHHC-SCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHH-HhcCceEEE-Ee-eCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 34555679999988753 22222233333 222233332 32 3333 344455556666666 5799999998853
No 253
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=29.00 E-value=79 Score=23.43 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=32.0
Q ss_pred HHHHHhhCC-CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 67 PEIWNDSGG-KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 67 ~Ei~~Ql~~-~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.|+.++... ..+.||+..|.-+.+.|+..++- ...||||-+...
T Consensus 57 ~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~ 101 (174)
T 3kuu_A 57 FSFAEQAEANGLHVIIAGNGGAAHLPGMLAAKT----LVPVLGVPVQSA 101 (174)
T ss_dssp HHHHHHTTTTTCSEEEEEEESSCCHHHHHHHTC----SSCEEEEEECCT
T ss_pred HHHHHHHHhCCCcEEEEECChhhhhHHHHHhcc----CCCEEEeeCCCC
Confidence 355555432 37899999999999999988853 456999966543
No 254
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=28.99 E-value=1.9e+02 Score=22.52 Aligned_cols=104 Identities=11% Similarity=-0.018 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCEEEEeCC------CCChHHHHHHHHHHHHhCCCeEEeCCCCCC--CC--hHhhHhhhHHHHHHhhCCC
Q 027277 7 IERRIILRALGAEVYLADP------AVGFEGFVKKGEEILNRTPNGYILGQFENP--AN--PEIHYETTGPEIWNDSGGK 76 (225)
Q Consensus 7 ~~k~~~~~~~GA~v~~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~--~~~g~~t~~~Ei~~Ql~~~ 76 (225)
+.-++.|+.+|+++++++- ..+.-+.++.+.+.+.+++=+.+++.+..+ .. ....+...-.+|.+..+..
T Consensus 34 ~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~w~~ia~~y~~~ 113 (294)
T 2whl_A 34 STAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDSRSDLNRAVDYWIEMKDALIGK 113 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCCHHHHHHHHHHHHHTHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEeccCCCCCcchhHHHHHHHHHHHHHHHcCC
Confidence 4567889999999988752 122345677788888888334444433221 11 0122222333455555555
Q ss_pred ccEEEEecCc---c--------hhHHHHHHHHHhhCCCcEEEEEeC
Q 027277 77 VDAFIAGIGT---G--------GTVTGAGRFLKEKNPNIKVYGIEP 111 (225)
Q Consensus 77 ~d~iv~~~G~---G--------g~~aGi~~~~k~~~~~~~vigVe~ 111 (225)
++.|+.-++. + ....-+...+|+..|+. +|-|+.
T Consensus 114 ~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~IR~~d~~~-~i~v~~ 158 (294)
T 2whl_A 114 EDTVIINIANEWYGSWDGSAWADGYIDVIPKLRDAGLTH-TLMVDA 158 (294)
T ss_dssp TTTEEEECCTTCCCSSCHHHHHHHHHHHHHHHHHTTCCS-CEEEEC
T ss_pred CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc-EEEEcC
Confidence 4555554432 1 11223445566666653 444543
No 255
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=28.99 E-value=45 Score=27.15 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=42.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHH--------HHHhhCCCccEEE
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPE--------IWNDSGGKVDAFI 81 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E--------i~~Ql~~~~d~iv 81 (225)
+..|...|++++.+.... ++-.. .+.. ..+++-.... . ..|+...+.| |.+.+ +..|.+|
T Consensus 18 i~rL~~~Ga~~iAiNTD~--q~L~~-----~k~~-~~~~i~~ggl--G-AGgdpe~g~e~a~e~~~eI~~~l-~~aD~VF 85 (315)
T 3r4v_A 18 ATKLVDLGEAVHCFDTCD--KNVVD-----VHRS-VNVTLTKGTR--G-AGGNRKVILPLVRPQIPALMDTI-PEADFYI 85 (315)
T ss_dssp HGGGGGGGGGEEEEESSS--TTCCG-----GGGG-SEEEECTTCC--C----CHHHHHHHHGGGHHHHHHTS-CCBSCEE
T ss_pred HHHHHHcCCCEEEEECch--HHhhh-----hhhh-cceeeecccC--C-CCCChHHHHHHHHhhHHHHHHhc-CCCCEEE
Confidence 455666778888887531 11100 0121 2344332211 1 2334444444 44444 3478888
Q ss_pred EecC-cchhHHHHHHHH----HhhCCCcEEEEEe
Q 027277 82 AGIG-TGGTVTGAGRFL----KEKNPNIKVYGIE 110 (225)
Q Consensus 82 ~~~G-~Gg~~aGi~~~~----k~~~~~~~vigVe 110 (225)
+.+| +|||=+|.+--+ |+.+..+-.+.+-
T Consensus 86 VtaGLGGGTGTGaAPVvAeiake~GalvVavVt~ 119 (315)
T 3r4v_A 86 VCYSLGGGSGSVLGPLITGQLADRKASFVSFVVG 119 (315)
T ss_dssp EEEESSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEeccCCccccchHHHHHHHHHHcCCCEEEEEec
Confidence 8888 456666665444 4444443333333
No 256
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=28.92 E-value=1.9e+02 Score=21.87 Aligned_cols=70 Identities=16% Similarity=0.080 Sum_probs=39.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.... .+...++.+......++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 21 a~~l~~~G~~V~~~~r~~~----~~~~~~l~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~id~lv~~Ag~~ 90 (255)
T 2q2v_A 21 AQVLARAGANIVLNGFGDP----APALAEIARHGVKAVHH-PA-DLSD-VAQIEALFALAEREF-GGVDILVNNAGIQ 90 (255)
T ss_dssp HHHHHHTTCEEEEECSSCC----HHHHHHHHTTSCCEEEE-CC-CTTS-HHHHHHHHHHHHHHH-SSCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCCch----HHHHHHHHhcCCceEEE-eC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 4455667999999876432 12233333222223333 22 3333 344455566777777 5799999998853
No 257
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=28.90 E-value=2.2e+02 Score=23.07 Aligned_cols=74 Identities=12% Similarity=0.070 Sum_probs=41.2
Q ss_pred HHHHHHcCCEEEEeCCCCCh-H----HHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEec
Q 027277 10 RIILRALGAEVYLADPAVGF-E----GFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGI 84 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~-~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~ 84 (225)
...+...|++|+.+.....- + ...+.+.++.+. ++.....+. |-.. ......+..++.+++ +.+|.+|..+
T Consensus 62 a~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~-g~iDilVnnA 137 (346)
T 3kvo_A 62 ALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIV-DVRD-EQQISAAVEKAIKKF-GGIDILVNNA 137 (346)
T ss_dssp HHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TCEEEEEEC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECC
T ss_pred HHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CCeEEEEEc-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECC
Confidence 34555679999888653210 0 122333333333 233332222 3333 445566677787887 5799999999
Q ss_pred Ccc
Q 027277 85 GTG 87 (225)
Q Consensus 85 G~G 87 (225)
|..
T Consensus 138 G~~ 140 (346)
T 3kvo_A 138 SAI 140 (346)
T ss_dssp CCC
T ss_pred CCC
Confidence 853
No 258
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=28.71 E-value=1.5e+02 Score=22.40 Aligned_cols=72 Identities=21% Similarity=0.153 Sum_probs=38.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR-TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.+.. +...+...++.++ .....++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 31 a~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~-~~-Dl~~-~~~~~~~~~~~~~~~-~~id~li~~Ag~~ 103 (265)
T 1h5q_A 31 TRAVAAAGANVAVIYRSA--ADAVEVTEKVGKEFGVKTKAY-QC-DVSN-TDIVTKTIQQIDADL-GPISGLIANAGVS 103 (265)
T ss_dssp HHHHHHTTEEEEEEESSC--TTHHHHHHHHHHHHTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHS-CSEEEEEECCCCC
T ss_pred HHHHHHCCCeEEEEeCcc--hhhHHHHHHHHHhcCCeeEEE-Ee-eCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCcC
Confidence 344556799998887532 1222223333332 2233332 22 2333 334455556666666 5799999998854
No 259
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=28.56 E-value=1.8e+02 Score=21.94 Aligned_cols=56 Identities=14% Similarity=0.074 Sum_probs=35.8
Q ss_pred eEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEe
Q 027277 46 GYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIE 110 (225)
Q Consensus 46 ~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe 110 (225)
.||-.+. +.| ..---.++.|-+++++ +++||++..+|-|..=+...+ .+.+|+.|.
T Consensus 18 ~YF~~~G--~eN-T~~tl~la~era~e~~--Ik~iVVAS~sG~TA~k~~e~~----~~i~lVvVT 73 (201)
T 1vp8_A 18 VYFNKPG--REN-TEETLRLAVERAKELG--IKHLVVASSYGDTAMKALEMA----EGLEVVVVT 73 (201)
T ss_dssp EEESSCS--GGG-HHHHHHHHHHHHHHHT--CCEEEEECSSSHHHHHHHHHC----TTCEEEEEE
T ss_pred EEecCCC--ccc-HHHHHHHHHHHHHHcC--CCEEEEEeCCChHHHHHHHHh----cCCeEEEEe
Confidence 4444433 344 3334556667777773 889999999998874433322 568999885
No 260
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=28.51 E-value=1.7e+02 Score=23.18 Aligned_cols=70 Identities=16% Similarity=-0.061 Sum_probs=0.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC---CccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG---KVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~---~~d~iv~~~G~ 86 (225)
...++..|.++..... ..-.++.+.+++..+.. +...+ ..|=+|+- |++..+.. .+-.-++|.||
T Consensus 32 ~~~l~~~~~~~~~~~t-~~~~~a~~~~~~~~~~~-d~vv~---------~GGDGTl~-~v~~~l~~~~~~~~l~iiP~Gt 99 (304)
T 3s40_A 32 VPPLAAAFPDLHILHT-KEQGDATKYCQEFASKV-DLIIV---------FGGDGTVF-ECTNGLAPLEIRPTLAIIPGGT 99 (304)
T ss_dssp HHHHHHHCSEEEEEEC-CSTTHHHHHHHHHTTTC-SEEEE---------EECHHHHH-HHHHHHTTCSSCCEEEEEECSS
T ss_pred HHHHHHcCCeEEEEEc-cCcchHHHHHHHhhcCC-CEEEE---------EccchHHH-HHHHHHhhCCCCCcEEEecCCc
Q ss_pred chhHH
Q 027277 87 GGTVT 91 (225)
Q Consensus 87 Gg~~a 91 (225)
|..++
T Consensus 100 ~N~~a 104 (304)
T 3s40_A 100 CNDFS 104 (304)
T ss_dssp CCHHH
T ss_pred HHHHH
No 261
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=28.38 E-value=1.9e+02 Score=21.86 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=40.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHH-HHHHHHHHHHh-CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEG-FVKKGEEILNR-TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~-~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++... +. ..+...++.+. .....++ +. |... ......+..++.+++ +.+|.+|..+|..
T Consensus 21 a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~iD~lv~~Ag~~ 94 (260)
T 1x1t_A 21 ATALAAQGADIVLNGFGD--AAEIEKVRAGLAAQHGVKVLYD-GA-DLSK-GEAVRGLVDNAVRQM-GRIDILVNNAGIQ 94 (260)
T ss_dssp HHHHHHTTCEEEEECCSC--HHHHHHHHHHHHHHHTSCEEEE-CC-CTTS-HHHHHHHHHHHHHHH-SCCSEEEECCCCC
T ss_pred HHHHHHcCCEEEEEeCCc--chHHHHHHHHHHhccCCcEEEE-EC-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 345556799999988632 22 22333333332 2233333 22 3333 344455566777777 5799999999854
No 262
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=28.08 E-value=2.6e+02 Score=23.15 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=55.6
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHH------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVK------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
-.+.++.+|++|+.+++....+...+ ...++.++- +...++--.++.+ ...+..+.++++ ++..+++
T Consensus 191 vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~a-DvV~l~~Plt~~T----~~li~~~~l~~m--k~gailI 263 (365)
T 4hy3_A 191 LRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKS-DFIFVVAAVTSEN----KRFLGAEAFSSM--RRGAAFI 263 (365)
T ss_dssp HHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSC-SEEEECSCSSCC-------CCCHHHHHTS--CTTCEEE
T ss_pred HHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcC-CEEEEcCcCCHHH----HhhcCHHHHhcC--CCCcEEE
Confidence 34567889999999986432211111 123444444 5555543233332 233456778888 4789999
Q ss_pred ecCcchhH--HHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 83 GIGTGGTV--TGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 83 ~~G~Gg~~--aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
-+|.|+.+ ..+..+++. .... .+.++...
T Consensus 264 N~aRG~~vde~aL~~aL~~--g~i~-aaLDV~~~ 294 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAVSS--GHIV-AASDVYPE 294 (365)
T ss_dssp ECSCGGGSCHHHHHHHHHT--TSSE-EEESCCSS
T ss_pred ECcCCchhCHHHHHHHHHc--CCce-EEeeCCCC
Confidence 99999887 556666654 3456 56655443
No 263
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=28.07 E-value=2.1e+02 Score=22.16 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=39.0
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-----CCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEec
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNR-----TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGI 84 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~ 84 (225)
.+.+...|++|+.++.. .+...+...++... .....++ +. |... ......+..++.+++ +.+|.||..+
T Consensus 35 a~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~-~~-D~~~-~~~v~~~~~~~~~~~-g~id~li~~A 108 (303)
T 1yxm_A 35 VKELLELGSNVVIASRK--LERLKSAADELQANLPPTKQARVIPI-QC-NIRN-EEEVNNLVKSTLDTF-GKINFLVNNG 108 (303)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTSCTTCCCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhccccCCccEEEE-ec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECC
Confidence 34555679999988753 22222333333331 2122332 22 2333 344555566777777 5799999998
Q ss_pred Cc
Q 027277 85 GT 86 (225)
Q Consensus 85 G~ 86 (225)
|.
T Consensus 109 g~ 110 (303)
T 1yxm_A 109 GG 110 (303)
T ss_dssp CC
T ss_pred CC
Confidence 84
No 264
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=28.02 E-value=70 Score=26.94 Aligned_cols=36 Identities=11% Similarity=0.220 Sum_probs=26.7
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
|..||+..|.+|+.+. ..++.++++.+|+-++.+..
T Consensus 1 PKVvIIG~G~AGl~aA--~~l~~~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCA--SQIRRLDKESDIIIFEKDRD 36 (437)
T ss_dssp CCEEEECCSTTHHHHH--HHHHHHCSSSCEEEEESSSC
T ss_pred CeEEEECCCHHHHHHH--HHHHhCCCCCcEEEEeCCCC
Confidence 5578888888887664 35667788888988987654
No 265
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=27.94 E-value=1.3e+02 Score=24.33 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=44.4
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-CccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG-KVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~-~~d~iv~~~G~G 87 (225)
-++.++.+||+|+.+..+ ++..+.++++- -...++ ...+. +..++.+..++ .+|.||-++| +
T Consensus 205 a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lG----a~~vi~-~~~~~--------~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 205 GLQIAKATGAEVIVTSSS---REKLDRAFALG----ADHGIN-RLEED--------WVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp HHHHHHHTTCEEEEEESC---HHHHHHHHHHT----CSEEEE-TTTSC--------HHHHHHHHHTTCCEEEEEEETT-S
T ss_pred HHHHHHHcCCEEEEEecC---chhHHHHHHcC----CCEEEc-CCccc--------HHHHHHHHhCCCCceEEEECCC-h
Confidence 356778999999988753 34444444432 123333 22221 12234333433 5999999998 4
Q ss_pred hhHHHHHHHHHhhCCCcEEEEE
Q 027277 88 GTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~~~vigV 109 (225)
.++ ...++.+.+.-+++-+
T Consensus 268 ~~~---~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 268 AGL---GQSLKAVAPDGRISVI 286 (363)
T ss_dssp SCH---HHHHHHEEEEEEEEEE
T ss_pred HHH---HHHHHHhhcCCEEEEE
Confidence 443 3344555555566655
No 266
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=27.94 E-value=53 Score=24.76 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=23.6
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
+..+=+.||+|..+.-+ ....|+.+|+||+.+..
T Consensus 36 ~~vLDiGcG~G~~~~~l----A~~~p~~~v~giD~s~~ 69 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAM----AKDRPEQDFLGIEVHSP 69 (218)
T ss_dssp CEEEEESCTTCHHHHHH----HHHCTTSEEEEECSCHH
T ss_pred CeEEEEeeeChHHHHHH----HHHCCCCeEEEEEecHH
Confidence 45566777787665443 34567889999998765
No 267
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=27.87 E-value=82 Score=25.22 Aligned_cols=96 Identities=10% Similarity=0.085 Sum_probs=54.2
Q ss_pred HHHHHHHcCCEEEEeCCCCChHH---HHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecC
Q 027277 9 RRIILRALGAEVYLADPAVGFEG---FVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIG 85 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G 85 (225)
-.+.++.+|++|+.+++...-.+ ......++.++- +...+.-..++.+ ...+..+.++++ +++.+++-+|
T Consensus 137 vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~a-DiV~l~~P~t~~t----~~li~~~~l~~m--k~gailIN~a 209 (290)
T 3gvx_A 137 VAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQS-DFVLIAIPLTDKT----RGMVNSRLLANA--RKNLTIVNVA 209 (290)
T ss_dssp HHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHC-SEEEECCCCCTTT----TTCBSHHHHTTC--CTTCEEEECS
T ss_pred HHHHHHhhCcEEEEEeccccccccccccCChHHHhhcc-CeEEEEeeccccc----hhhhhHHHHhhh--hcCceEEEee
Confidence 34567889999999886421111 111233445554 5555543233332 223445777777 4789999999
Q ss_pred cchhH--HHHHHHHHhhCCCcEEEEEeCCC
Q 027277 86 TGGTV--TGAGRFLKEKNPNIKVYGIEPSE 113 (225)
Q Consensus 86 ~Gg~~--aGi~~~~k~~~~~~~vigVe~~~ 113 (225)
.|+.. ..+..++++- ...-.+.++..
T Consensus 210 RG~~vd~~aL~~aL~~g--~i~ga~lDV~~ 237 (290)
T 3gvx_A 210 RADVVSKPDMIGFLKER--SDVWYLSDVWW 237 (290)
T ss_dssp CGGGBCHHHHHHHHHHC--TTCEEEESCCT
T ss_pred hhcccCCcchhhhhhhc--cceEEeecccc
Confidence 99865 5566666542 23334554433
No 268
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=27.85 E-value=58 Score=26.67 Aligned_cols=29 Identities=28% Similarity=0.378 Sum_probs=24.2
Q ss_pred EEEEecCcchhHHHHHHHHHhhC-CCcEEE
Q 027277 79 AFIAGIGTGGTVTGAGRFLKEKN-PNIKVY 107 (225)
Q Consensus 79 ~iv~~~G~Gg~~aGi~~~~k~~~-~~~~vi 107 (225)
-||+-||+|-+.+-++.+++.++ +++++|
T Consensus 277 ~vI~yCgsGvtA~~~~laL~~lG~~~v~lY 306 (327)
T 3utn_X 277 PTICSCGTGVSGVIIKTALELAGVPNVRLY 306 (327)
T ss_dssp CEEEECSSSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CEEEECChHHHHHHHHHHHHHcCCCCceeC
Confidence 58999999999999999998876 467775
No 269
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=27.82 E-value=1.2e+02 Score=24.04 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=27.2
Q ss_pred HHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 67 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 67 ~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
.+++++- +.||+|||. +..+..|+..++++.+- ++.|+|.+
T Consensus 231 ~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvgfD 275 (339)
T 3h5o_A 231 DRALAER-PDCDALFCC--NDDLAIGALARSQQLGIAVPERLAIAGFN 275 (339)
T ss_dssp HHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHcCC-CCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 3444443 468998874 45677788889888753 46676653
No 270
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=27.73 E-value=2.1e+02 Score=22.05 Aligned_cols=71 Identities=11% Similarity=0.009 Sum_probs=36.5
Q ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 11 IILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 11 ~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
+.+...|++|+.+... .+...+...++.+......++. . |... ......+..++.++. +.+|.||..+|..
T Consensus 62 ~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~-Dl~d-~~~v~~~~~~~~~~~-~~id~li~~Ag~~ 132 (285)
T 2c07_A 62 KMLAKSVSHVICISRT--QKSCDSVVDEIKSFGYESSGYA-G-DVSK-KEEISEVINKILTEH-KNVDILVNNAGIT 132 (285)
T ss_dssp HHHTTTSSEEEEEESS--HHHHHHHHHHHHTTTCCEEEEE-C-CTTC-HHHHHHHHHHHHHHC-SCCCEEEECCCCC
T ss_pred HHHHHcCCEEEEEcCC--HHHHHHHHHHHHhcCCceeEEE-C-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 3444568888887642 2222222333322222233322 1 2333 334455556666666 5799999998854
No 271
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=26.73 E-value=2.5e+02 Score=22.61 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=25.7
Q ss_pred cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 78 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 78 d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
+.||+..++|-+-.+++.+.+.++ .+++.|-|...+
T Consensus 72 ~~vvv~aSsGN~g~alA~aa~~~G--~~~~iv~p~~~~ 107 (334)
T 3tbh_A 72 KSIVVESSSGNTGVSLAHLGAIRG--YKVIITMPESMS 107 (334)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHHT--CEEEEEEETTSC
T ss_pred CeEEEEeCCCHHHHHHHHHHHHhC--CCEEEEECCCCC
Confidence 455566677888888888888875 566667777653
No 272
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=26.66 E-value=1.2e+02 Score=23.03 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=25.8
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEeC
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIEP 111 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe~ 111 (225)
+.||+|||. +.....|+..++++.+. ++.|+|.+-
T Consensus 186 ~~~~ai~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~ 224 (289)
T 1dbq_A 186 HRPTAVFCG--GDIMAMGALCAADEMGLRVPQDVSLIGYDN 224 (289)
T ss_dssp SCCSEEEES--CHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CCCCEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEeeCC
Confidence 468999875 45567788999988753 467888853
No 273
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=26.58 E-value=1.4e+02 Score=21.66 Aligned_cols=43 Identities=12% Similarity=0.110 Sum_probs=25.9
Q ss_pred HHHHhhCCCc--cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 68 EIWNDSGGKV--DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 68 Ei~~Ql~~~~--d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.+++.+...+ ..+-+.+|+|.... .+....+..+|++|+.+..
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~~~~----~la~~~~~~~v~~vD~s~~ 75 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSASVSI----EASNLMPNGRIFALERNPQ 75 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCHHHH----HHHHHCTTSEEEEEECCHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCHHHH----HHHHHCCCCEEEEEeCCHH
Confidence 3455554333 35556677765443 3344467789999998654
No 274
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=26.52 E-value=2e+02 Score=22.15 Aligned_cols=72 Identities=10% Similarity=0.051 Sum_probs=36.3
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-.+.+...|++|+.++.. .+...+.+.++. +.....++. . |... ......+..++.+++ +.+|.+|..+|..
T Consensus 37 ia~~La~~G~~V~~~~r~--~~~~~~~~~~~~-~~~~~~~~~-~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lvnnAG~~ 108 (272)
T 2nwq_A 37 CARRFAEAGWSLVLTGRR--EERLQALAGELS-AKTRVLPLT-L-DVRD-RAAMSAAVDNLPEEF-ATLRGLINNAGLA 108 (272)
T ss_dssp HHHHHHHTTCEEEEEESC--HHHHHHHHHHHT-TTSCEEEEE-C-CTTC-HHHHHHHHHTCCGGG-SSCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECC--HHHHHHHHHHhh-cCCcEEEEE-c-CCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 344556679999888752 222222222222 212333332 2 2333 233333444444555 4699999999854
No 275
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=26.34 E-value=2.4e+02 Score=22.38 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=42.6
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-CccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG-KVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~-~~d~iv~~~G~G 87 (225)
-++.++..|++|+.+..+ ++..+.+ ++.+-...++. .+.. ...++.+..++ .+|.+|-++|+
T Consensus 165 ~~~~a~~~Ga~Vi~~~~~---~~~~~~~----~~~ga~~~~~~-~~~~--------~~~~~~~~~~~~g~D~vid~~g~- 227 (334)
T 3qwb_A 165 LNQLLKMKGAHTIAVAST---DEKLKIA----KEYGAEYLINA-SKED--------ILRQVLKFTNGKGVDASFDSVGK- 227 (334)
T ss_dssp HHHHHHHTTCEEEEEESS---HHHHHHH----HHTTCSEEEET-TTSC--------HHHHHHHHTTTSCEEEEEECCGG-
T ss_pred HHHHHHHCCCEEEEEeCC---HHHHHHH----HHcCCcEEEeC-CCch--------HHHHHHHHhCCCCceEEEECCCh-
Confidence 356778899999888752 2333333 33322223332 1111 22344443432 48999999986
Q ss_pred hhHHHHHHHHHhhCCCcEEEEE
Q 027277 88 GTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~~~vigV 109 (225)
.++ ...++.+.+.-+++-+
T Consensus 228 ~~~---~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 228 DTF---EISLAALKRKGVFVSF 246 (334)
T ss_dssp GGH---HHHHHHEEEEEEEEEC
T ss_pred HHH---HHHHHHhccCCEEEEE
Confidence 333 3344444455566554
No 276
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=26.20 E-value=2.4e+02 Score=22.79 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=24.5
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
.+.||.+ ++|-+-.+++.+.+.++ .+++.+-|...+
T Consensus 88 ~~~vv~~-ssGN~g~alA~aa~~~G--~~~~iv~p~~~~ 123 (342)
T 2gn0_A 88 RKGVVAC-SAGNHAQGVSLSCAMLG--IDGKVVMPKGAP 123 (342)
T ss_dssp HTCEEEE-CSSHHHHHHHHHHHHHT--CCEEEEECTTSC
T ss_pred CCEEEEE-CCChHHHHHHHHHHHcC--CCEEEEECCCCC
Confidence 3556665 68888888888887766 455666676643
No 277
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=26.16 E-value=72 Score=24.51 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=21.8
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 202 ~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 237 (298)
T 3tb6_A 202 PTAILCY--NDEIALKVIDMLREMDLKVPEDMSIVGYD 237 (298)
T ss_dssp CSEEECS--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CeEEEEe--CcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 8888865 45566788888887753 45666653
No 278
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=26.15 E-value=1.5e+02 Score=24.38 Aligned_cols=97 Identities=21% Similarity=0.212 Sum_probs=55.0
Q ss_pred HHHHHHHcCCEEEEeCCCCChH--HH--HHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEec
Q 027277 9 RRIILRALGAEVYLADPAVGFE--GF--VKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGI 84 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~--~~--~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~ 84 (225)
-.+.++.+|++|+.+++...-. .. .....++.++- +...++--.++.+ +..+..+.++++ ++..+++-+
T Consensus 163 vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~a-DvV~l~~Plt~~t----~~li~~~~l~~m--k~gailIN~ 235 (343)
T 2yq5_A 163 VAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEA-DIVSLHTPLFPST----ENMIGEKQLKEM--KKSAYLINC 235 (343)
T ss_dssp HHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHC-SEEEECCCCCTTT----TTCBCHHHHHHS--CTTCEEEEC
T ss_pred HHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcC-CEEEEcCCCCHHH----HHHhhHHHHhhC--CCCcEEEEC
Confidence 3456789999999998643210 00 00123445554 5555543233332 233456778888 478999999
Q ss_pred CcchhH--HHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 85 GTGGTV--TGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 85 G~Gg~~--aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
|.|+.. ..+..+++.- ...=.+.++...
T Consensus 236 aRg~~vd~~aL~~aL~~g--~i~gA~LDV~~~ 265 (343)
T 2yq5_A 236 ARGELVDTGALIKALQDG--EIAGAGLDTLAG 265 (343)
T ss_dssp SCGGGBCHHHHHHHHHHT--SSSCEEESCCTT
T ss_pred CCChhhhHHHHHHHHHcC--CCcEEEeccccc
Confidence 999876 4555666542 222245544443
No 279
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=25.93 E-value=68 Score=24.52 Aligned_cols=34 Identities=9% Similarity=-0.108 Sum_probs=24.7
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhC----CCcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~----~~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+ .++.|+|.+
T Consensus 180 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 217 (276)
T 3jy6_A 180 DQKTVAFAL--KERWLLEFFPNLIISGLIDNQTVTATGFA 217 (276)
T ss_dssp SSCEEEEES--SHHHHHHHSHHHHHSSSCCSSSEEEEEBC
T ss_pred CCCcEEEEe--CcHHHHHHHHHHHHcCCCCCCcEEEEEEC
Confidence 468988874 5566778888998876 346777764
No 280
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=25.83 E-value=1.3e+02 Score=23.92 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=25.7
Q ss_pred HHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 68 EIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 68 Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
+++++- ++||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 240 ~ll~~~-~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 240 AMLERS-PDLDFLYYS--NDMIAAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp HHHHHS-TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHhcC-CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 444443 468888865 45567788888887753 45666653
No 281
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=25.81 E-value=2.1e+02 Score=22.25 Aligned_cols=75 Identities=11% Similarity=0.177 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCC--CeEEeCC-CCCCCC-hHhhHhhhHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhh-CCCcE
Q 027277 31 GFVKKGEEILNRTP--NGYILGQ-FENPAN-PEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEK-NPNIK 105 (225)
Q Consensus 31 ~~~~~a~~~~~~~~--~~~~~~~-~~~~~~-~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~-~~~~~ 105 (225)
...+..+++.++++ ..+.++. ..+... ...--+..+.+++.++-. ++ -++.+++|.|+.+++..+... .++++
T Consensus 8 ~~~~Le~~L~~~fgL~~~~Vv~~~~~~~~~~~~~~l~~~aA~~l~~~l~-~~-~viGla~G~T~~~~~~~l~~~~~~~v~ 85 (266)
T 2gnp_A 8 NMFKLENYVKEKYSLESLEIIPNEFDDTPTILSERISQVAAGVLRNLID-DN-MKIGFSWGKSLSNLVDLIHSKSVRNVH 85 (266)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHCC-TT-CEEEECCSHHHHHHHHHCCCCCCSSCE
T ss_pred cHHHHHHHHHHHhCCCeEEEeCCCCCCchhHHHHHHHHHHHHHHHHhCC-CC-CEEEECChHHHHHHHHhccccCCCCCE
Confidence 34455566666652 2344443 122211 122233444455544312 23 257888999999999888643 23454
Q ss_pred EE
Q 027277 106 VY 107 (225)
Q Consensus 106 vi 107 (225)
++
T Consensus 86 ~v 87 (266)
T 2gnp_A 86 FY 87 (266)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 282
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=25.76 E-value=2.1e+02 Score=21.32 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=37.9
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... .+...+...++ .......++. . |... ......+..++.+++ +.+|.||..+|..
T Consensus 23 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~-~~~~~~~~~~-~-D~~~-~~~~~~~~~~~~~~~-~~id~li~~Ag~~ 93 (251)
T 1zk4_A 23 ATKFVEEGAKVMITGRH--SDVGEKAAKSV-GTPDQIQFFQ-H-DSSD-EDGWTKLFDATEKAF-GPVSTLVNNAGIA 93 (251)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH-CCTTTEEEEE-C-CTTC-HHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHh-hccCceEEEE-C-CCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 34555679999988753 22222222222 2112333332 1 2333 334455556676777 5799999998854
No 283
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=25.31 E-value=2.1e+02 Score=21.34 Aligned_cols=74 Identities=20% Similarity=0.018 Sum_probs=38.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhC-----CCccEEEEec
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG-----GKVDAFIAGI 84 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~-----~~~d~iv~~~ 84 (225)
.+.+...|++|+.+... +.+...+...++.+.. ......+. +... ......+..++.++++ +++|.+|..+
T Consensus 24 a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-D~~~-~~~~~~~~~~~~~~~~~~~~~~~id~lv~nA 99 (255)
T 3icc_A 24 AKRLANDGALVAIHYGN-RKEEAEETVYEIQSNG-GSAFSIGA-NLES-LHGVEALYSSLDNELQNRTGSTKFDILINNA 99 (255)
T ss_dssp HHHHHHTTCEEEEEESS-CSHHHHHHHHHHHHTT-CEEEEEEC-CTTS-HHHHHHHHHHHHHHHHHHHSSSCEEEEEECC
T ss_pred HHHHHHCCCeEEEEeCC-chHHHHHHHHHHHhcC-CceEEEec-CcCC-HHHHHHHHHHHHHHhcccccCCcccEEEECC
Confidence 44556679999875321 2233444444444433 33332222 2333 3344445555555542 2489999998
Q ss_pred Ccc
Q 027277 85 GTG 87 (225)
Q Consensus 85 G~G 87 (225)
|.+
T Consensus 100 g~~ 102 (255)
T 3icc_A 100 GIG 102 (255)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 284
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=25.29 E-value=1.8e+02 Score=23.37 Aligned_cols=83 Identities=12% Similarity=0.014 Sum_probs=43.8
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhh----CCCccEEEEec
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDS----GGKVDAFIAGI 84 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql----~~~~d~iv~~~ 84 (225)
-++..+.+|++|+.++.+ ++..+.++ +.+-...++.-+.... ..++.+.. +..+|.+|-++
T Consensus 184 a~qla~~~Ga~Vi~~~~~---~~~~~~~~----~lGa~~~~~~~~~~~~--------~~~i~~~~~~~~g~g~D~vid~~ 248 (352)
T 1e3j_A 184 SVLAAKAYGAFVVCTARS---PRRLEVAK----NCGADVTLVVDPAKEE--------ESSIIERIRSAIGDLPNVTIDCS 248 (352)
T ss_dssp HHHHHHHTTCEEEEEESC---HHHHHHHH----HTTCSEEEECCTTTSC--------HHHHHHHHHHHSSSCCSEEEECS
T ss_pred HHHHHHHcCCEEEEEcCC---HHHHHHHH----HhCCCEEEcCcccccH--------HHHHHHHhccccCCCCCEEEECC
Confidence 356778899998777642 34444443 3311122332111221 12333323 23589999999
Q ss_pred CcchhHHHHHHHHHhhCCCcEEEEE
Q 027277 85 GTGGTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 85 G~Gg~~aGi~~~~k~~~~~~~vigV 109 (225)
|+..++. ..++.+.+.-+++-+
T Consensus 249 g~~~~~~---~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 249 GNEKCIT---IGINITRTGGTLMLV 270 (352)
T ss_dssp CCHHHHH---HHHHHSCTTCEEEEC
T ss_pred CCHHHHH---HHHHHHhcCCEEEEE
Confidence 8765443 344555566677655
No 285
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=25.20 E-value=2.6e+02 Score=22.31 Aligned_cols=84 Identities=19% Similarity=0.081 Sum_probs=46.4
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHH------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVK------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
-.+.++.+|++|+.+++...-..+.+ ...++.++- +...+.--.++.+ ...+..+.++++ +++.+++
T Consensus 157 ~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~a-DvVvl~~P~~~~t----~~li~~~~l~~m--k~ga~lI 229 (313)
T 2ekl_A 157 VGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNS-DVISLHVTVSKDA----KPIIDYPQFELM--KDNVIIV 229 (313)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHC-SEEEECCCCCTTS----CCSBCHHHHHHS--CTTEEEE
T ss_pred HHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhC-CEEEEeccCChHH----HHhhCHHHHhcC--CCCCEEE
Confidence 34567889999999886432211100 112344443 4554432222222 122334667777 3688999
Q ss_pred ecCcchhHH--HHHHHHHh
Q 027277 83 GIGTGGTVT--GAGRFLKE 99 (225)
Q Consensus 83 ~~G~Gg~~a--Gi~~~~k~ 99 (225)
-+|.|+..- -+..+++.
T Consensus 230 n~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 230 NTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp ESSCGGGBCHHHHHHHHHT
T ss_pred ECCCCcccCHHHHHHHHHc
Confidence 999988764 45555543
No 286
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=25.19 E-value=1.4e+02 Score=20.45 Aligned_cols=44 Identities=11% Similarity=-0.003 Sum_probs=26.5
Q ss_pred HHHHHhhC---CCccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCC
Q 027277 67 PEIWNDSG---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSE 113 (225)
Q Consensus 67 ~Ei~~Ql~---~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~ 113 (225)
.|+.+.+. ..-..+-+.+|+|....-+... .++..++++++...
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~---~~~~~~v~~~D~~~ 57 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQ---IGGKGRIIACDLLP 57 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHH---HCTTCEEEEEESSC
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHH---hCCCCeEEEEECcc
Confidence 35655543 1223566677777665443332 25668999999876
No 287
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=25.09 E-value=2.7e+02 Score=22.35 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=25.4
Q ss_pred ccEEEEecCcchhHHHHHHHHHhh--CCCcEEEEEeCCCCc
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEK--NPNIKVYGIEPSESA 115 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~--~~~~~vigVe~~~~~ 115 (225)
+|. ++.+|+=||+..++.++... ..++. +|+=|.|..
T Consensus 83 ~d~-vvv~GGDGTl~~v~~~l~~~~~~~~~p-lgiiP~Gt~ 121 (332)
T 2bon_A 83 VAT-VIAGGGDGTINEVSTALIQCEGDDIPA-LGILPLGTA 121 (332)
T ss_dssp CSE-EEEEESHHHHHHHHHHHHHCCSSCCCE-EEEEECSSS
T ss_pred CCE-EEEEccchHHHHHHHHHhhcccCCCCe-EEEecCcCH
Confidence 565 45577878888888888754 33455 677777764
No 288
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.95 E-value=1.6e+02 Score=20.94 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=28.9
Q ss_pred HHHHhh--CCCccEEEEecCcchhHHHHHHHHHhhCCCcEEEEE
Q 027277 68 EIWNDS--GGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 68 Ei~~Ql--~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigV 109 (225)
|.+++. -...|.||++++.-....-+...++..++..+|+..
T Consensus 95 ~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 95 DFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp HHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 344444 245899999998766655566677777877887764
No 289
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=24.89 E-value=2.4e+02 Score=21.73 Aligned_cols=69 Identities=19% Similarity=0.262 Sum_probs=38.7
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++ . +...++. .|-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 45 a~~la~~G~~V~~~~r~--~~~~~~~~~~~-~--~~~~~~~--~Dv~d-~~~v~~~~~~~~~~~-g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 45 AVALAGAGYGVALAGRR--LDALQETAAEI-G--DDALCVP--TDVTD-PDSVRALFTATVEKF-GRVDVLFNNAGTG 113 (272)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH-T--SCCEEEE--CCTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHh-C--CCeEEEE--ecCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34455668888888742 22222222222 1 1233322 12333 345566667787888 5799999999864
No 290
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=24.88 E-value=84 Score=25.86 Aligned_cols=74 Identities=7% Similarity=-0.100 Sum_probs=41.3
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhC-CCccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG-GKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~-~~~d~iv~~~G~G 87 (225)
-++..+.+||+|+.+..+ ++..+.++ +.+-...++. .+.. ...++.+..+ ..+|.+|-++|+.
T Consensus 188 a~q~a~~~Ga~Vi~~~~~---~~~~~~~~----~lGa~~~~~~-~~~~--------~~~~v~~~t~~~g~d~v~d~~g~~ 251 (379)
T 3iup_A 188 LNQICLKDGIKLVNIVRK---QEQADLLK----AQGAVHVCNA-ASPT--------FMQDLTEALVSTGATIAFDATGGG 251 (379)
T ss_dssp HHHHHHHHTCCEEEEESS---HHHHHHHH----HTTCSCEEET-TSTT--------HHHHHHHHHHHHCCCEEEESCEEE
T ss_pred HHHHHHHCCCEEEEEECC---HHHHHHHH----hCCCcEEEeC-CChH--------HHHHHHHHhcCCCceEEEECCCch
Confidence 356778899999888642 34444444 3321122322 2211 1223333332 2489999999987
Q ss_pred hhHHHHHHHHH
Q 027277 88 GTVTGAGRFLK 98 (225)
Q Consensus 88 g~~aGi~~~~k 98 (225)
.++.-+...++
T Consensus 252 ~~~~~~~~~l~ 262 (379)
T 3iup_A 252 KLGGQILTCME 262 (379)
T ss_dssp SHHHHHHHHHH
T ss_pred hhHHHHHHhcc
Confidence 77666666665
No 291
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=24.86 E-value=2.8e+02 Score=22.49 Aligned_cols=97 Identities=14% Similarity=0.047 Sum_probs=55.4
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHH-----HHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEe
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFV-----KKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAG 83 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~-----~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~ 83 (225)
-.+.++.+|++|+.+++...-.... ....++.++- +...++--.++.+ +..+..+.++++ ++.++++-
T Consensus 156 vA~~l~~~G~~V~~~d~~~~~~~~~~g~~~~~l~ell~~a-DvV~l~~P~t~~t----~~li~~~~l~~m--k~gailIN 228 (334)
T 2pi1_A 156 VAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKES-DVISLHVPYTKET----HHMINEERISLM--KDGVYLIN 228 (334)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHC-SEEEECCCCCTTT----TTCBCHHHHHHS--CTTEEEEE
T ss_pred HHHHHHHCcCEEEEECCCcchhhHhcCceecCHHHHHhhC-CEEEEeCCCChHH----HHhhCHHHHhhC--CCCcEEEE
Confidence 3466789999999998643211100 0123445554 5555543223332 233456778888 47899999
Q ss_pred cCcchhH--HHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 84 IGTGGTV--TGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 84 ~G~Gg~~--aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
+|.|+.. ..+..+++. ....=.+.++...
T Consensus 229 ~aRg~~vd~~aL~~aL~~--g~i~gA~lDV~~~ 259 (334)
T 2pi1_A 229 TARGKVVDTDALYRAYQR--GKFSGLGLDVFED 259 (334)
T ss_dssp CSCGGGBCHHHHHHHHHT--TCEEEEEESCCTT
T ss_pred CCCCcccCHHHHHHHHHh--CCceEEEeecCCC
Confidence 9999876 455555543 2333345554443
No 292
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=24.85 E-value=2.7e+02 Score=22.89 Aligned_cols=36 Identities=11% Similarity=0.210 Sum_probs=23.8
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
.+.||.+ ++|-+-.+++.+.+.++ .+++.+-|...+
T Consensus 93 ~~~vv~a-SsGN~g~alA~aa~~~G--~~~~iv~p~~~~ 128 (372)
T 1p5j_A 93 CAHFVCS-SAGNAGMAAAYAARQLG--VPATIVVPGTTP 128 (372)
T ss_dssp CCEEEEC-CSSHHHHHHHHHHHHHT--CCEEEEECTTCC
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcC--CcEEEEECCCCC
Confidence 4566655 55788788887777766 455666776653
No 293
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.72 E-value=2.3e+02 Score=21.57 Aligned_cols=72 Identities=15% Similarity=0.216 Sum_probs=37.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHH--HhCC-CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEIL--NRTP-NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 86 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~--~~~~-~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~ 86 (225)
.+.+...|++|+.++.. .+...+...++. ...+ ...++ +. |... ......+..++.+++ +.+|.+|..+|.
T Consensus 23 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~id~lv~~Ag~ 96 (278)
T 1spx_A 23 AVLFAREGAKVTITGRH--AERLEETRQQILAAGVSEQNVNSV-VA-DVTT-DAGQDEILSTTLGKF-GKLDILVNNAGA 96 (278)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCGGGEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCC-
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcccCCCceeEE-ec-ccCC-HHHHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34455679999988753 222222233331 1111 22222 22 2333 344455566777777 579999999886
Q ss_pred c
Q 027277 87 G 87 (225)
Q Consensus 87 G 87 (225)
.
T Consensus 97 ~ 97 (278)
T 1spx_A 97 A 97 (278)
T ss_dssp -
T ss_pred C
Confidence 4
No 294
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=24.50 E-value=2.3e+02 Score=21.36 Aligned_cols=69 Identities=20% Similarity=0.241 Sum_probs=39.2
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+.+.++ .....++ +. +... ......+..++.+++ +.+|.+|..+|.+
T Consensus 26 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~---~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~id~li~~Ag~~ 94 (261)
T 3n74_A 26 AKRFAKGGAKVVIVDRD--KAGAERVAGEI---GDAALAV-AA-DISK-EADVDAAVEAALSKF-GKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH---CTTEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC--HHHHHHHHHHh---CCceEEE-Ee-cCCC-HHHHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 34555679999988753 22222222222 1123332 22 2333 344556667787888 5799999999864
No 295
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=24.24 E-value=2.4e+02 Score=21.56 Aligned_cols=69 Identities=16% Similarity=0.110 Sum_probs=38.4
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++... +...+.+.++ .....++. .|-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 28 a~~l~~~G~~V~~~~r~~--~~~~~~~~~~---~~~~~~~~--~Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 96 (271)
T 3tzq_B 28 SRVLARAGARVVLADLPE--TDLAGAAASV---GRGAVHHV--VDLTN-EVSVRALIDFTIDTF-GRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHTTCEEEEEECTT--SCHHHHHHHH---CTTCEEEE--CCTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCCH--HHHHHHHHHh---CCCeEEEE--CCCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 345556799988887532 2222222222 11222221 12333 344555666777777 5799999998864
No 296
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=24.11 E-value=2.5e+02 Score=21.65 Aligned_cols=61 Identities=10% Similarity=-0.001 Sum_probs=39.5
Q ss_pred ChHHHHHHHHHcCCEEEEeCCCCC--hHHHHHHHHHHHHhCCCeEEeCCCC-CCCChHhhHhhhHHHHHHhhCCCccEEE
Q 027277 5 YSIERRIILRALGAEVYLADPAVG--FEGFVKKGEEILNRTPNGYILGQFE-NPANPEIHYETTGPEIWNDSGGKVDAFI 81 (225)
Q Consensus 5 ~~~~k~~~~~~~GA~v~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv 81 (225)
.+.+-++.+...||+++.++.+.+ .+...+..+++.+ .+-...+-+|. |+. ...+|.++
T Consensus 21 ~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i-----------------~~gvDg~i 82 (234)
T 2f6u_A 21 NTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNV-----------------VYDVDYLF 82 (234)
T ss_dssp CCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCC-----------------CCCSSEEE
T ss_pred ccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC-CCCCEEEecCCcchh-----------------hcCCCEEE
Confidence 445557778888999999987543 4556666666644 32345555665 332 23588888
Q ss_pred Ee
Q 027277 82 AG 83 (225)
Q Consensus 82 ~~ 83 (225)
+|
T Consensus 83 ip 84 (234)
T 2f6u_A 83 VP 84 (234)
T ss_dssp EE
T ss_pred Ec
Confidence 88
No 297
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=24.08 E-value=2.7e+02 Score=22.07 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=23.4
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
.+.||.+ ++|-+-.+++.+.+.++ .+++.+-|...+
T Consensus 54 ~~~vv~~-ssGN~g~alA~~a~~~G--~~~~i~~p~~~~ 89 (318)
T 2rkb_A 54 CRHLVCS-SGGNAGIAAAYAARKLG--IPATIVLPESTS 89 (318)
T ss_dssp CCEEEEC-CCSHHHHHHHHHHHHHT--CCEEEEECTTCC
T ss_pred CCEEEEE-CCchHHHHHHHHHHHcC--CCEEEEECCCCc
Confidence 4566665 55777778877777666 455566676543
No 298
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=24.06 E-value=1.5e+02 Score=23.36 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=25.4
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 238 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~disvvg~D 275 (332)
T 2hsg_A 238 EKPTAIFVG--TDEMALGVIHGAQDRGLNVPNDLEIIGFD 275 (332)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCHHHHCEEEEES
T ss_pred CCCeEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 468999964 56677899999988764 36788874
No 299
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=23.95 E-value=3.2e+02 Score=22.83 Aligned_cols=84 Identities=15% Similarity=0.062 Sum_probs=48.2
Q ss_pred HHHHHHHcCCEEEEeCCCCChHH-HHH-------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEG-FVK-------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~-~~~-------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
-.+.++.+|++|+.+++...-.+ ..+ ...++.++- +...++--.++.+ ...+..+.++++ +++.+
T Consensus 206 vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~a-DvV~l~~Plt~~t----~~li~~~~l~~m--k~gai 278 (393)
T 2nac_A 206 VLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVC-DVVTLNCPLHPET----EHMINDETLKLF--KRGAY 278 (393)
T ss_dssp HHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGC-SEEEECSCCCTTT----TTCBSHHHHTTS--CTTEE
T ss_pred HHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcC-CEEEEecCCchHH----HHHhhHHHHhhC--CCCCE
Confidence 34567789999998876421111 111 123444444 5555543222322 223345667777 46899
Q ss_pred EEecCcchhHH--HHHHHHHh
Q 027277 81 IAGIGTGGTVT--GAGRFLKE 99 (225)
Q Consensus 81 v~~~G~Gg~~a--Gi~~~~k~ 99 (225)
++-++.|+..- .+..+++.
T Consensus 279 lIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 279 IVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp EEECSCGGGBCHHHHHHHHHT
T ss_pred EEECCCchHhhHHHHHHHHHc
Confidence 99999998764 46666654
No 300
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=23.93 E-value=2.4e+02 Score=21.48 Aligned_cols=22 Identities=18% Similarity=0.193 Sum_probs=16.0
Q ss_pred HHHHHHHHHhhCCCcEEEEEeC
Q 027277 90 VTGAGRFLKEKNPNIKVYGIEP 111 (225)
Q Consensus 90 ~aGi~~~~k~~~~~~~vigVe~ 111 (225)
+.-+...+++..|+.+|+.+.|
T Consensus 147 l~~li~~lr~~~p~a~Iilitp 168 (274)
T 3bzw_A 147 INIGITQLKKLFPDKQIVLLTP 168 (274)
T ss_dssp HHHHHHHHHHHCTTSEEEEECC
T ss_pred HHHHHHHHHHHCCCCeEEEEec
Confidence 3455556667788999999876
No 301
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=23.73 E-value=2.8e+02 Score=22.16 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=23.9
Q ss_pred cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 78 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 78 d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
+.|+. .++|-+-.+++.+.+.++ .+++.|-|...+
T Consensus 74 ~~vv~-aSsGN~g~alA~aa~~~G--~~~~iv~p~~~~ 108 (325)
T 3dwg_A 74 ATILE-PTSGNTGISLAMAARLKG--YRLICVMPENTS 108 (325)
T ss_dssp CEEEE-ECSSHHHHHHHHHHHHHT--CEEEEEEESSSC
T ss_pred CEEEE-eCCcHHHHHHHHHHHHcC--CcEEEEECCCCC
Confidence 45554 567888888888888776 566667676643
No 302
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=23.69 E-value=2.4e+02 Score=21.36 Aligned_cols=69 Identities=20% Similarity=0.126 Sum_probs=38.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++ .. ...++. . |... ......+..++.+++ +.+|.+|..+|..
T Consensus 25 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~-~~--~~~~~~-~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 93 (255)
T 4eso_A 25 VRRLVEGGAEVLLTGRN--ESNIARIREEF-GP--RVHALR-S-DIAD-LNEIAVLGAAAGQTL-GAIDLLHINAGVS 93 (255)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH-GG--GEEEEE-C-CTTC-HHHHHHHHHHHHHHH-SSEEEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHh-CC--cceEEE-c-cCCC-HHHHHHHHHHHHHHh-CCCCEEEECCCCC
Confidence 34556679999998753 22222222222 11 233322 2 2333 344555666777777 5799999998864
No 303
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=23.61 E-value=2.9e+02 Score=23.80 Aligned_cols=58 Identities=24% Similarity=0.412 Sum_probs=29.9
Q ss_pred CCCChHhhHhhhHHHHHHhhC----------CCccEEEEecC-cchhHHHHHH----HHHhhCCCcE--EEEEeCC
Q 027277 54 NPANPEIHYETTGPEIWNDSG----------GKVDAFIAGIG-TGGTVTGAGR----FLKEKNPNIK--VYGIEPS 112 (225)
Q Consensus 54 ~~~~~~~g~~t~~~Ei~~Ql~----------~~~d~iv~~~G-~Gg~~aGi~~----~~k~~~~~~~--vigVe~~ 112 (225)
...+|..|| +.|.|+.+++. +.++.+++..| +|||=+|++. .+++.+|+.- .++|-|.
T Consensus 100 Agnn~a~G~-~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~~lt~~V~P~ 174 (475)
T 3cb2_A 100 AGNNWASGF-SQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPN 174 (475)
T ss_dssp CTTCHHHHH-HHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSEEEEEEEECC
T ss_pred CCCCchhhh-hhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCceEEEEEECC
Confidence 445677787 46655554431 12455666555 3344456544 4455565533 4555554
No 304
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.45 E-value=2.3e+02 Score=21.12 Aligned_cols=69 Identities=13% Similarity=0.072 Sum_probs=39.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++ .. +..++. . |... ......+..++.++. +.+|.+|..+|.+
T Consensus 20 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~-~~--~~~~~~-~-D~~~-~~~v~~~~~~~~~~~-g~id~lvnnAg~~ 88 (235)
T 3l6e_A 20 TIGLVERGHQVSMMGRR--YQRLQQQELLL-GN--AVIGIV-A-DLAH-HEDVDVAFAAAVEWG-GLPELVLHCAGTG 88 (235)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH-GG--GEEEEE-C-CTTS-HHHHHHHHHHHHHHH-CSCSEEEEECCCC
T ss_pred HHHHHHCCCEEEEEECC--HHHHHHHHHHh-cC--CceEEE-C-CCCC-HHHHHHHHHHHHHhc-CCCcEEEECCCCC
Confidence 34556679999998853 22222222333 22 233322 2 3333 344556666777777 5799999999864
No 305
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=23.18 E-value=2.4e+02 Score=21.22 Aligned_cols=73 Identities=15% Similarity=0.076 Sum_probs=37.6
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... +.+...+...++.+......++ +. |... ......+..++.+++ +.+|.||..+|..
T Consensus 38 a~~l~~~G~~v~~~~r~-~~~~~~~~~~~l~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 38 AIELGRRGASVVVNYGS-SSKAAEEVVAELKKLGAQGVAI-QA-DISK-PSEVVALFDKAVSHF-GGLDFVMSNSGME 110 (274)
T ss_dssp HHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCEEEEECCCCCC
T ss_pred HHHHHHCCCEEEEEcCC-chHHHHHHHHHHHhcCCcEEEE-Ee-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34455668998887642 2222222223333222223332 22 2333 233444555677777 4799999988854
No 306
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=23.06 E-value=2.2e+02 Score=21.77 Aligned_cols=68 Identities=13% Similarity=0.237 Sum_probs=38.1
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP-NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... +... ++.++.+ ...++. . |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 22 a~~l~~~G~~V~~~~r~~--~~~~----~~~~~~~~~~~~~~-~-Dv~~-~~~~~~~~~~~~~~~-g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 22 AEAAVAAGDTVIGTARRT--EALD----DLVAAYPDRAEAIS-L-DVTD-GERIDVVAADVLARY-GRVDVLVNNAGRT 90 (281)
T ss_dssp HHHHHHTTCEEEEEESSG--GGGH----HHHHHCTTTEEEEE-C-CTTC-HHHHHHHHHHHHHHH-SCCSEEEECCCCE
T ss_pred HHHHHHCCCEEEEEeCCH--HHHH----HHHHhccCCceEEE-e-eCCC-HHHHHHHHHHHHHhC-CCCCEEEECCCcC
Confidence 345566799998887532 2211 2222222 233322 2 2333 344555666777777 5799999999854
No 307
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=22.96 E-value=1.8e+02 Score=23.12 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=27.4
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEe
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIE 110 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe 110 (225)
.||+||+. +++....++.+.+++.+.++.+++..
T Consensus 206 ~~dai~~~-~~~~~a~~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 206 KPDCVYAF-FSGGGALKFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp CCSEEEEE-CCTHHHHHHHHHHHHTTCCCCEEEEG
T ss_pred CCCEEEEe-cCcchHHHHHHHHHHcCCCceEEecC
Confidence 58998886 45678889999999988888888863
No 308
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=22.93 E-value=1.6e+02 Score=23.03 Aligned_cols=25 Identities=8% Similarity=0.145 Sum_probs=16.6
Q ss_pred HhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 62 YETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 62 ~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
...+..++.+++ +.+|.+|..+|..
T Consensus 102 v~~~~~~~~~~~-g~iD~lVnnAG~~ 126 (287)
T 3rku_A 102 IKPFIENLPQEF-KDIDILVNNAGKA 126 (287)
T ss_dssp HHHHHHTSCGGG-CSCCEEEECCCCC
T ss_pred HHHHHHHHHHhc-CCCCEEEECCCcC
Confidence 344444555555 4799999999854
No 309
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.88 E-value=71 Score=23.42 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=20.3
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCC
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPS 112 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~ 112 (225)
+|.+|+..|=.|+.+.+ .|+..+ .+|..+|-.
T Consensus 3 ~dV~IIGaGpaGL~aA~--~La~~G--~~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQ--ALTAAG--HQVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHH--HHHHTT--CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHH--HHHHCC--CCEEEEECC
Confidence 68889888777766654 333434 566667754
No 310
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=22.82 E-value=1.3e+02 Score=25.34 Aligned_cols=84 Identities=21% Similarity=0.224 Sum_probs=49.9
Q ss_pred HHHHHHHcCCEEEEeCCCCChH----HHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEec
Q 027277 9 RRIILRALGAEVYLADPAVGFE----GFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGI 84 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~ 84 (225)
-.+.++.+|++|+.+++..... .......++.++- +...++--.++.+ ...+..+.++++ ++.++++-+
T Consensus 160 vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~a-DvV~l~~P~t~~t----~~li~~~~l~~m--k~ga~lIN~ 232 (404)
T 1sc6_A 160 LGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMS-DVVSLHVPENPST----KNMMGAKEISLM--KPGSLLINA 232 (404)
T ss_dssp HHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHC-SEEEECCCSSTTT----TTCBCHHHHHHS--CTTEEEEEC
T ss_pred HHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcC-CEEEEccCCChHH----HHHhhHHHHhhc--CCCeEEEEC
Confidence 3456788999999988632110 0011133455554 5666553333332 223445777888 478999999
Q ss_pred CcchhHH--HHHHHHHh
Q 027277 85 GTGGTVT--GAGRFLKE 99 (225)
Q Consensus 85 G~Gg~~a--Gi~~~~k~ 99 (225)
+.|+..- .+..+++.
T Consensus 233 aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 233 SRGTVVDIPALADALAS 249 (404)
T ss_dssp SCSSSBCHHHHHHHHHT
T ss_pred CCChHHhHHHHHHHHHc
Confidence 9998764 55666654
No 311
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=22.77 E-value=2.3e+02 Score=21.57 Aligned_cols=27 Identities=4% Similarity=-0.113 Sum_probs=18.9
Q ss_pred hhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 60 IHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 60 ~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.....+..++.++. +.+|.+|..+|..
T Consensus 84 ~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 110 (260)
T 3gem_A 84 TGIMAFIDLLKTQT-SSLRAVVHNASEW 110 (260)
T ss_dssp HHHHHHHHHHHHHC-SCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhc-CCCCEEEECCCcc
Confidence 34455566666666 5799999998853
No 312
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=22.72 E-value=78 Score=23.54 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=23.4
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
+..+=++||+|..+.-+ ....|..+++||+.+..
T Consensus 40 ~~vLDiGcG~G~~~~~l----a~~~p~~~v~giD~s~~ 73 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGM----AKQNPDINYIGIELFKS 73 (213)
T ss_dssp CEEEEECCTTSHHHHHH----HHHCTTSEEEEECSCHH
T ss_pred ceEEEEecCCCHHHHHH----HHHCCCCCEEEEEechH
Confidence 44566778887765543 33467889999998754
No 313
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=22.70 E-value=2.4e+02 Score=20.92 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=36.0
Q ss_pred HHHHHHcCCEEEEe-CCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLA-DPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+ .... +...+...++........++ +. |... ......+..++.+++ +.+|.||..+|..
T Consensus 22 a~~l~~~G~~V~~~~~r~~--~~~~~~~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 22 AWKLGNMGANIVLNGSPAS--TSLDATAEEFKAAGINVVVA-KG-DVKN-PEDVENMVKTAMDAF-GRIDILVNNAGIT 94 (247)
T ss_dssp HHHHHHTTCEEEEEECTTC--SHHHHHHHHHHHTTCCEEEE-ES-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECC---
T ss_pred HHHHHHCCCEEEEEcCcCH--HHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 44556679999988 4322 12222223332222223333 22 2333 334444555666666 5799999998864
No 314
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=22.66 E-value=3.1e+02 Score=22.32 Aligned_cols=84 Identities=20% Similarity=0.163 Sum_probs=45.3
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHH-------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEE
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVK-------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFI 81 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~-------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv 81 (225)
-.+.++.+|++|+.+++...-....+ ...++.++- +...+.--.++.+ ...+..+.++++ +++.++
T Consensus 183 vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~a-DvV~l~~P~t~~t----~~li~~~~l~~m--k~gail 255 (347)
T 1mx3_A 183 VALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHS-DCVTLHCGLNEHN----HHLINDFTVKQM--RQGAFL 255 (347)
T ss_dssp HHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHC-SEEEECCCCCTTC----TTSBSHHHHTTS--CTTEEE
T ss_pred HHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcC-CEEEEcCCCCHHH----HHHhHHHHHhcC--CCCCEE
Confidence 34566788999988875321111100 123444444 5554432222222 122335666777 468899
Q ss_pred EecCcchhH--HHHHHHHHh
Q 027277 82 AGIGTGGTV--TGAGRFLKE 99 (225)
Q Consensus 82 ~~~G~Gg~~--aGi~~~~k~ 99 (225)
+-++.|+.. .-+..+++.
T Consensus 256 IN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 256 VNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp EECSCTTSBCHHHHHHHHHH
T ss_pred EECCCChHHhHHHHHHHHHh
Confidence 999998765 445556654
No 315
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=22.64 E-value=3e+02 Score=22.05 Aligned_cols=84 Identities=10% Similarity=0.017 Sum_probs=47.0
Q ss_pred HHHHHHHcCCEEEEeCC-CCChHHHHH-------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEE
Q 027277 9 RRIILRALGAEVYLADP-AVGFEGFVK-------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAF 80 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~-~~~~~~~~~-------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~i 80 (225)
-.+.++.+|++|+.+++ ...-..+.+ ...++.++- +...+.--.++.+ ...+..++++.+ +++.+
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~a-DvVil~~p~~~~t----~~~i~~~~l~~m--k~gai 233 (320)
T 1gdh_A 161 LAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVS-QFFSLNAPSTPET----RYFFNKATIKSL--PQGAI 233 (320)
T ss_dssp HHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHC-SEEEECCCCCTTT----TTCBSHHHHTTS--CTTEE
T ss_pred HHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhC-CEEEEeccCchHH----HhhcCHHHHhhC--CCCcE
Confidence 34567789999999886 432211110 122344443 4555442222222 122334566776 47899
Q ss_pred EEecCcchhH--HHHHHHHHh
Q 027277 81 IAGIGTGGTV--TGAGRFLKE 99 (225)
Q Consensus 81 v~~~G~Gg~~--aGi~~~~k~ 99 (225)
++-+|+|+.. .-+...++.
T Consensus 234 lIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 234 VVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp EEECSCGGGBCHHHHHHHHHH
T ss_pred EEECCCCcccCHHHHHHHHHh
Confidence 9999998764 356666664
No 316
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=22.50 E-value=1.5e+02 Score=23.91 Aligned_cols=81 Identities=21% Similarity=0.175 Sum_probs=42.9
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcch
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGG 88 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg 88 (225)
-++.++..|++|+.+..+ ++..+.++++- -...++. .+.. ...++.+..+..+|.+|-++|+.
T Consensus 184 ~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~lG----a~~~~~~-~~~~--------~~~~~~~~~~~g~Dvvid~~g~~- 246 (353)
T 4dup_A 184 AIQLARAFGAEVYATAGS---TGKCEACERLG----AKRGINY-RSED--------FAAVIKAETGQGVDIILDMIGAA- 246 (353)
T ss_dssp HHHHHHHTTCEEEEEESS---HHHHHHHHHHT----CSEEEET-TTSC--------HHHHHHHHHSSCEEEEEESCCGG-
T ss_pred HHHHHHHcCCEEEEEeCC---HHHHHHHHhcC----CCEEEeC-CchH--------HHHHHHHHhCCCceEEEECCCHH-
Confidence 456778899999888753 34444444431 1122322 1111 12233333344699999999864
Q ss_pred hHHHHHHHHHhhCCCcEEEEE
Q 027277 89 TVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 89 ~~aGi~~~~k~~~~~~~vigV 109 (225)
+ +...++.+.+.-+++-+
T Consensus 247 ~---~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 247 Y---FERNIASLAKDGCLSII 264 (353)
T ss_dssp G---HHHHHHTEEEEEEEEEC
T ss_pred H---HHHHHHHhccCCEEEEE
Confidence 2 23345544455555544
No 317
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=22.47 E-value=2.4e+02 Score=20.84 Aligned_cols=73 Identities=14% Similarity=0.005 Sum_probs=38.7
Q ss_pred HHHHHHcCCEEEEe-CCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLA-DPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+ ... .+...+...++........++.+. |... ......+..++.+++ +.+|.||..+|..
T Consensus 18 a~~l~~~G~~v~~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-D~~~-~~~~~~~~~~~~~~~-~~~d~li~~Ag~~ 91 (245)
T 2ph3_A 18 ALRLAEDGFALAIHYGQN--REKAEEVAEEARRRGSPLVAVLGA-NLLE-AEAATALVHQAAEVL-GGLDTLVNNAGIT 91 (245)
T ss_dssp HHHHHTTTCEEEEEESSC--HHHHHHHHHHHHHTTCSCEEEEEC-CTTS-HHHHHHHHHHHHHHH-TCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHhcCCceEEEEec-cCCC-HHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 34555679999887 542 222222333333322222321121 2333 334455556676777 5799999998854
No 318
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=22.47 E-value=79 Score=24.10 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=23.1
Q ss_pred ccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 77 VDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 77 ~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
+..+=+.||+|..+. .+....|...++||+.+..
T Consensus 48 ~~vLDiGcG~G~~~~----~la~~~p~~~v~GiDis~~ 81 (235)
T 3ckk_A 48 VEFADIGCGYGGLLV----ELSPLFPDTLILGLEIRVK 81 (235)
T ss_dssp EEEEEETCTTCHHHH----HHGGGSTTSEEEEEESCHH
T ss_pred CeEEEEccCCcHHHH----HHHHHCCCCeEEEEECCHH
Confidence 445556777776654 3445567889999998754
No 319
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=22.44 E-value=69 Score=29.49 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=23.2
Q ss_pred EEEEecCcchhHHHHHHHHHhhC---------CCcEEEEEeCCC
Q 027277 79 AFIAGIGTGGTVTGAGRFLKEKN---------PNIKVYGIEPSE 113 (225)
Q Consensus 79 ~iv~~~G~Gg~~aGi~~~~k~~~---------~~~~vigVe~~~ 113 (225)
.+++.+|+|-+..-+.++.+..+ ...+|++||...
T Consensus 413 VldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 413 IYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp EEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred EEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 56677788777654445544333 457999999864
No 320
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=22.35 E-value=2.6e+02 Score=21.18 Aligned_cols=71 Identities=17% Similarity=0.130 Sum_probs=37.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++ ...+...++. . |... ......+..++.++. +.+|.+|..+|..
T Consensus 33 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~-~~~~~~~~~~-~-D~~~-~~~~~~~~~~~~~~~-~~id~li~~Ag~~ 103 (278)
T 2bgk_A 33 AKLFVRYGAKVVIADIA--DDHGQKVCNNI-GSPDVISFVH-C-DVTK-DEDVRNLVDTTIAKH-GKLDIMFGNVGVL 103 (278)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHH-CCTTTEEEEE-C-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCC--hhHHHHHHHHh-CCCCceEEEE-C-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCccc
Confidence 34455568998888642 12222222222 1111233332 2 2333 344455666777777 5799999998854
No 321
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=22.32 E-value=2.5e+02 Score=21.09 Aligned_cols=69 Identities=19% Similarity=0.175 Sum_probs=39.3
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. .+...+...++ ... ..++. . |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 26 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~-~~~-~~~~~--~-Dv~d-~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 94 (248)
T 3op4_A 26 AELLAERGAKVIGTATS--ESGAQAISDYL-GDN-GKGMA--L-NVTN-PESIEAVLKAITDEF-GGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHTTCEEEEEESS--HHHHHHHHHHH-GGG-EEEEE--C-CTTC-HHHHHHHHHHHHHHH-CCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--HHHHHHHHHHh-ccc-ceEEE--E-eCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 44556679999988753 22222222333 222 22222 1 2333 344556667777777 5799999998854
No 322
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=22.02 E-value=1.4e+02 Score=21.40 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=27.5
Q ss_pred CCccEEEEecCcch----------hHHHHHHHHHhhCCCcEEEEEeCC
Q 027277 75 GKVDAFIAGIGTGG----------TVTGAGRFLKEKNPNIKVYGIEPS 112 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg----------~~aGi~~~~k~~~~~~~vigVe~~ 112 (225)
.+||.|++..|+=. .+..+...++..+|+++|+.+.+.
T Consensus 73 ~~pd~Vvi~~G~ND~~~~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~ 120 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTT 120 (200)
T ss_dssp SCCSEEEECCCSSCTTSCHHHHHHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCCeEEEEeeeCCCCCCHHHHHHHHHHHHHHHhhhCCCccEEEeccC
Confidence 36999999988632 245566667777899999888653
No 323
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=21.92 E-value=58 Score=27.93 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=23.5
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhh-CCCcEEEEEeCCC
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEK-NPNIKVYGIEPSE 113 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~-~~~~~vigVe~~~ 113 (225)
+..|+|||..|++|.. .+.+.. .++.+|..+|.=+
T Consensus 16 ~~yD~IIVGsG~aG~v----~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSL----LAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHH----HHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHH----HHHHHHhCCCCeEEEEcCCC
Confidence 3589999988776543 344433 4678999998643
No 324
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=21.85 E-value=2.5e+02 Score=22.72 Aligned_cols=82 Identities=7% Similarity=-0.051 Sum_probs=41.4
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 8 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.-++.++.+|++|+.+..+ ++..+.++ +.+-...++. .+. . +..++.+..+..+|.+|-++|+
T Consensus 179 ~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~----~~Ga~~~~~~-~~~-~-------~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 179 FAMQLSKKAKCHVIGTCSS---DEKSAFLK----SLGCDRPINY-KTE-P-------VGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp HHHHHHHHTTCEEEEEESS---HHHHHHHH----HTTCSEEEET-TTS-C-------HHHHHHHHCTTCEEEEEECSCT-
T ss_pred HHHHHHHhCCCEEEEEECC---HHHHHHHH----HcCCcEEEec-CCh-h-------HHHHHHHhcCCCCCEEEECCCH-
Confidence 3456778899999888742 33434433 3321222322 211 1 1122222222358999999885
Q ss_pred hhHHHHHHHHHhhCCCcEEEEE
Q 027277 88 GTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~~~vigV 109 (225)
.+ +...++.+.+.-+++-+
T Consensus 242 ~~---~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 242 AM---FDLAVDALATKGRLIVI 260 (362)
T ss_dssp HH---HHHHHHHEEEEEEEEEC
T ss_pred HH---HHHHHHHHhcCCEEEEE
Confidence 22 33344444444566554
No 325
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=21.77 E-value=2.1e+02 Score=20.40 Aligned_cols=47 Identities=17% Similarity=0.114 Sum_probs=26.7
Q ss_pred hHHHHHHhhCC---CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 027277 65 TGPEIWNDSGG---KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA 115 (225)
Q Consensus 65 ~~~Ei~~Ql~~---~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~~ 115 (225)
+...+++.+.. ....+=+.+|+|....-+ ....+..+++|++.+...
T Consensus 17 ~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l----~~~~~~~~v~~vD~~~~~ 66 (215)
T 4dzr_A 17 LVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSI----ALACPGVSVTAVDLSMDA 66 (215)
T ss_dssp HHHHHHHHHTTCCTTEEEEEEESSBCHHHHHH----HHHCTTEEEEEEECC---
T ss_pred HHHHHHHHhhhcCCCCEEEEecCCHhHHHHHH----HHhCCCCeEEEEECCHHH
Confidence 44455555532 234555677777665433 334567899999987653
No 326
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=21.66 E-value=96 Score=23.81 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=22.6
Q ss_pred CCccEEEEecCcchhHHHHHHHHHhhCC----CcEEEEEe
Q 027277 75 GKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIE 110 (225)
Q Consensus 75 ~~~d~iv~~~G~Gg~~aGi~~~~k~~~~----~~~vigVe 110 (225)
+.||+|||. +..+..|+..++++.+. ++.|+|.+
T Consensus 183 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vvg~d 220 (285)
T 3c3k_A 183 VKPDAIFAI--SDVLAAGAIQALTESGLSIPQDVAVVGFD 220 (285)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CCCeEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 358888875 45567788888887653 35566553
No 327
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=21.59 E-value=2.8e+02 Score=21.34 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=37.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC-eEEe-CCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPN-GYIL-GQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~-~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+.... .+...+.+.++.++.+. ..++ -...++.........+..++.+++ +.+|.+|..+|..
T Consensus 40 a~~L~~~G~~V~~~~r~~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAG~~ 117 (288)
T 2x9g_A 40 AVKLHQTGYRVVIHYHNS-AEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAF 117 (288)
T ss_dssp HHHHHHHTCEEEEEESSC-HHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCeEEEEeCCc-hHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 344555699998887531 12222333333313222 2222 111221111233444555666666 5799999998853
No 328
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=21.53 E-value=1.8e+02 Score=23.14 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=41.7
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcch
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGG 88 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg 88 (225)
-++.++.+|++|+.+..+ ++..+.+ .++.+-...++. .+.. ...++.+..+..+|.+|-++|+ .
T Consensus 166 ~~~~a~~~Ga~Vi~~~~~---~~~~~~~---~~~~g~~~~~~~-~~~~--------~~~~~~~~~~~~~d~vi~~~g~-~ 229 (336)
T 4b7c_A 166 AGQIARLKGCRVVGIAGG---AEKCRFL---VEELGFDGAIDY-KNED--------LAAGLKRECPKGIDVFFDNVGG-E 229 (336)
T ss_dssp HHHHHHHTTCEEEEEESS---HHHHHHH---HHTTCCSEEEET-TTSC--------HHHHHHHHCTTCEEEEEESSCH-H
T ss_pred HHHHHHHCCCEEEEEeCC---HHHHHHH---HHHcCCCEEEEC-CCHH--------HHHHHHHhcCCCceEEEECCCc-c
Confidence 456778899999888742 2333322 134322222322 1111 2223333333459999999885 2
Q ss_pred hHHHHHHHHHhhCCCcEEEEE
Q 027277 89 TVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 89 ~~aGi~~~~k~~~~~~~vigV 109 (225)
+ +...++.+.+.-+++-+
T Consensus 230 ~---~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 230 I---LDTVLTRIAFKARIVLC 247 (336)
T ss_dssp H---HHHHHTTEEEEEEEEEC
T ss_pred h---HHHHHHHHhhCCEEEEE
Confidence 2 33344444444555544
No 329
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=21.52 E-value=2.4e+02 Score=21.89 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=26.7
Q ss_pred CccEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeC
Q 027277 76 KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEP 111 (225)
Q Consensus 76 ~~d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~ 111 (225)
.||+||+.. .+....++.+.+++.+.++++++...
T Consensus 193 ~~d~i~~~~-~~~~a~~~~~~~~~~g~~~~~~~~~~ 227 (346)
T 1usg_A 193 NIDFVYYGG-YYPEMGQMLRQARSVGLKTQFMGPEG 227 (346)
T ss_dssp TCCEEEEES-CHHHHHHHHHHHHHTTCCCEEEECGG
T ss_pred CCCEEEEcC-cchHHHHHHHHHHHcCCCCeEEecCC
Confidence 589988864 45667789999998887777877543
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=21.48 E-value=3.3e+02 Score=22.06 Aligned_cols=84 Identities=12% Similarity=-0.021 Sum_probs=45.8
Q ss_pred HHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGA-EVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-++..+.+|| +|+.++.+. +..+. +++.+-...++..+... .+..++.+..++.+|.+|-++|+.
T Consensus 209 a~q~a~~~Ga~~Vi~~~~~~---~~~~~----a~~lGa~~vi~~~~~~~-------~~~~~i~~~~~gg~D~vid~~g~~ 274 (378)
T 3uko_A 209 VAEGAKTAGASRIIGIDIDS---KKYET----AKKFGVNEFVNPKDHDK-------PIQEVIVDLTDGGVDYSFECIGNV 274 (378)
T ss_dssp HHHHHHHHTCSCEEEECSCT---THHHH----HHTTTCCEEECGGGCSS-------CHHHHHHHHTTSCBSEEEECSCCH
T ss_pred HHHHHHHcCCCeEEEEcCCH---HHHHH----HHHcCCcEEEccccCch-------hHHHHHHHhcCCCCCEEEECCCCH
Confidence 3567788999 788887532 33333 34442123333221111 123344444444699999999876
Q ss_pred hhHHHHHHHHHhhCCC-cEEEEE
Q 027277 88 GTVTGAGRFLKEKNPN-IKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~-~~vigV 109 (225)
.++ ...++.+.+. -+++-+
T Consensus 275 ~~~---~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 275 SVM---RAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHH---HHHHHTBCTTTCEEEEC
T ss_pred HHH---HHHHHHhhccCCEEEEE
Confidence 554 3455555564 566555
No 331
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=21.33 E-value=2.2e+02 Score=21.63 Aligned_cols=47 Identities=19% Similarity=0.179 Sum_probs=28.5
Q ss_pred hHHHHHHhhCCCc--cEEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 65 TGPEIWNDSGGKV--DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 65 ~~~Ei~~Ql~~~~--d~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
....+++.+...+ ..+-+.+|+|.+..-++.. .++..+|++++....
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~v~~vD~~~~ 135 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRA---VGPAGQVISYEQRAD 135 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---HCTTSEEEEECSCHH
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHH---hCCCCEEEEEeCCHH
Confidence 4445666654333 3566677777665544332 356789999987543
No 332
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=21.24 E-value=2.1e+02 Score=19.67 Aligned_cols=88 Identities=16% Similarity=0.144 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhC-CCccEEEEecC
Q 027277 7 IERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG-GKVDAFIAGIG 85 (225)
Q Consensus 7 ~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~-~~~d~iv~~~G 85 (225)
....+.+...|.+|+.++.. ..+..+...+.. .. +..++. .++.. .+.+++.+ ...|.||++++
T Consensus 16 ~~la~~L~~~g~~V~vid~~--~~~~~~~~~~~~-~~-~~~~i~--gd~~~---------~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 16 INTILQLNQRGQNVTVISNL--PEDDIKQLEQRL-GD-NADVIP--GDSND---------SSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp HHHHHHHHHTTCCEEEEECC--CHHHHHHHHHHH-CT-TCEEEE--SCTTS---------HHHHHHHTTTTCSEEEECSS
T ss_pred HHHHHHHHHCCCCEEEEECC--ChHHHHHHHHhh-cC-CCeEEE--cCCCC---------HHHHHHcChhhCCEEEEecC
Confidence 34456677789999888752 122222222221 11 333332 22222 12333321 45899999998
Q ss_pred cchhHHHHHHHHHhhCCCcEEEEE
Q 027277 86 TGGTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 86 ~Gg~~aGi~~~~k~~~~~~~vigV 109 (225)
.-..-.-+....+.+++..+|+..
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 81 NDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp CHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 876666666777888888888774
No 333
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=21.13 E-value=3.1e+02 Score=22.16 Aligned_cols=97 Identities=10% Similarity=0.077 Sum_probs=53.4
Q ss_pred HHHHHHHcCCEEEEeCCCCC----hHH--HHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEE
Q 027277 9 RRIILRALGAEVYLADPAVG----FEG--FVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIA 82 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~----~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~ 82 (225)
-.+.++.+|++|+.+++... ++. ......++.++- +...++--.++.+ +..+..+.++++ ++..+++
T Consensus 155 vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~a-DvV~l~lPlt~~T----~~li~~~~l~~m--k~gailI 227 (324)
T 3hg7_A 155 IAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQA-DVIVSVLPATRET----HHLFTASRFEHC--KPGAILF 227 (324)
T ss_dssp HHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTC-SEEEECCCCCSSS----TTSBCTTTTTCS--CTTCEEE
T ss_pred HHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhC-CEEEEeCCCCHHH----HHHhHHHHHhcC--CCCcEEE
Confidence 34567889999998875321 000 011234455554 5555543233332 222334556666 4789999
Q ss_pred ecCcchhH--HHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 83 GIGTGGTV--TGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 83 ~~G~Gg~~--aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
-+|.|+.+ ..+..+++. ....-.+.++...
T Consensus 228 N~aRG~~vde~aL~~aL~~--g~i~ga~lDV~~~ 259 (324)
T 3hg7_A 228 NVGRGNAINEGDLLTALRT--GKLGMAVLDVFEQ 259 (324)
T ss_dssp ECSCGGGBCHHHHHHHHHT--TSSSEEEESCCSS
T ss_pred ECCCchhhCHHHHHHHHHc--CCceEEEeccCCC
Confidence 99999987 455666654 2333355544433
No 334
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=20.99 E-value=3.1e+02 Score=21.56 Aligned_cols=33 Identities=12% Similarity=0.200 Sum_probs=22.3
Q ss_pred EEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 79 AFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 79 ~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.|+. ..+|-+-.+++.+.+.++ .+++.+-|...
T Consensus 64 ~vv~-assGN~g~a~A~~a~~~G--~~~~i~~p~~~ 96 (304)
T 1ve1_A 64 VIVE-PTSGNTGIGLAMIAASRG--YRLILTMPAQM 96 (304)
T ss_dssp EEEE-SCCSHHHHHHHHHHHHHT--CEEEEEEETTC
T ss_pred EEEE-eCCcHHHHHHHHHHHHcC--CcEEEEeCCCC
Confidence 4554 567778778887777665 56666767654
No 335
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=20.90 E-value=1.1e+02 Score=23.77 Aligned_cols=43 Identities=9% Similarity=0.163 Sum_probs=29.8
Q ss_pred hHHHHHHhhCCCccEEEEecCcchhHHHHHHHHHhhCCC----cEEEEEe
Q 027277 65 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPN----IKVYGIE 110 (225)
Q Consensus 65 ~~~Ei~~Ql~~~~d~iv~~~G~Gg~~aGi~~~~k~~~~~----~~vigVe 110 (225)
...+++++- +.||+|||. +..+..|+..++++.+.. +.|+|.+
T Consensus 187 ~~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D 233 (301)
T 3miz_A 187 AATEMLKQD-DRPTAIMSG--NDEMAIQIYIAAMALGLRIPQDVSIVGFD 233 (301)
T ss_dssp HHHHHHTST-TCCSEEEES--SHHHHHHHHHHHHTTTCCHHHHCEEECSB
T ss_pred HHHHHHcCC-CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCCeeEEEeC
Confidence 345666443 569999976 455777999999988743 5677664
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=20.86 E-value=2.7e+02 Score=22.15 Aligned_cols=82 Identities=9% Similarity=0.024 Sum_probs=42.6
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 8 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.-++..+.+|++|+.+..+ ++..+.++ +.+-...++. .+. . ...++.+.. ..+|.+|-++|+.
T Consensus 179 ~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~----~lGa~~~~d~-~~~-~-------~~~~~~~~~-~~~d~vid~~g~~ 241 (339)
T 1rjw_A 179 VAVQYAKAMGLNVVAVDIG---DEKLELAK----ELGADLVVNP-LKE-D-------AAKFMKEKV-GGVHAAVVTAVSK 241 (339)
T ss_dssp HHHHHHHHTTCEEEEECSC---HHHHHHHH----HTTCSEEECT-TTS-C-------HHHHHHHHH-SSEEEEEESSCCH
T ss_pred HHHHHHHHcCCEEEEEeCC---HHHHHHHH----HCCCCEEecC-CCc-c-------HHHHHHHHh-CCCCEEEECCCCH
Confidence 3456778899999988753 33334333 3321223332 222 1 112232222 4689999999875
Q ss_pred hhHHHHHHHHHhhCCCcEEEEE
Q 027277 88 GTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~~~vigV 109 (225)
.++.- .++.+.+.-+++-+
T Consensus 242 ~~~~~---~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 242 PAFQS---AYNSIRRGGACVLV 260 (339)
T ss_dssp HHHHH---HHHHEEEEEEEEEC
T ss_pred HHHHH---HHHHhhcCCEEEEe
Confidence 55433 34444444455544
No 337
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=20.85 E-value=2.7e+02 Score=20.91 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=37.5
Q ss_pred HHHHHHcC---CEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-CccEEEEecC
Q 027277 10 RIILRALG---AEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG-KVDAFIAGIG 85 (225)
Q Consensus 10 ~~~~~~~G---A~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~-~~d~iv~~~G 85 (225)
.+.+...| ++|+.+.....-.+ ...++.+..+...++. . |... ......+..++.+.++. .+|.||..+|
T Consensus 38 a~~L~~~G~~~~~V~~~~r~~~~~~---~~~~l~~~~~~~~~~~-~-Dl~~-~~~v~~~~~~~~~~~g~~~id~li~~Ag 111 (267)
T 1sny_A 38 VKALLNLPQPPQHLFTTCRNREQAK---ELEDLAKNHSNIHILE-I-DLRN-FDAYDKLVADIEGVTKDQGLNVLFNNAG 111 (267)
T ss_dssp HHHHHTSSSCCSEEEEEESCTTSCH---HHHHHHHHCTTEEEEE-C-CTTC-GGGHHHHHHHHHHHHGGGCCSEEEECCC
T ss_pred HHHHHhcCCCCcEEEEEecChhhhH---HHHHhhccCCceEEEE-e-cCCC-hHHHHHHHHHHHHhcCCCCccEEEECCC
Confidence 34455567 88888775321111 2233333332333332 1 2222 23344455566666632 6999999998
Q ss_pred cch
Q 027277 86 TGG 88 (225)
Q Consensus 86 ~Gg 88 (225)
...
T Consensus 112 ~~~ 114 (267)
T 1sny_A 112 IAP 114 (267)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 338
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=20.79 E-value=3.2e+02 Score=21.91 Aligned_cols=85 Identities=13% Similarity=0.177 Sum_probs=44.5
Q ss_pred HHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGA-EVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-++..+.+|+ +|+.++.+ ++..+.+ ++.+-...++. ..... .....++.+..+..+|.||-++|+.
T Consensus 187 aiqlak~~Ga~~Vi~~~~~---~~~~~~a----~~lGa~~vi~~-~~~~~-----~~~~~~i~~~~~~g~D~vid~~g~~ 253 (356)
T 1pl8_A 187 TLLVAKAMGAAQVVVTDLS---ATRLSKA----KEIGADLVLQI-SKESP-----QEIARKVEGQLGCKPEVTIECTGAE 253 (356)
T ss_dssp HHHHHHHTTCSEEEEEESC---HHHHHHH----HHTTCSEEEEC-SSCCH-----HHHHHHHHHHHTSCCSEEEECSCCH
T ss_pred HHHHHHHcCCCEEEEECCC---HHHHHHH----HHhCCCEEEcC-ccccc-----chHHHHHHHHhCCCCCEEEECCCCh
Confidence 3567788999 88888743 2333443 33311122321 10000 1122344433333589999999876
Q ss_pred hhHHHHHHHHHhhCCCcEEEEE
Q 027277 88 GTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~~~vigV 109 (225)
.++. ..++.+.+.-+++-+
T Consensus 254 ~~~~---~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 254 ASIQ---AGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHH---HHHHHSCTTCEEEEC
T ss_pred HHHH---HHHHHhcCCCEEEEE
Confidence 5543 344555566676655
No 339
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=20.73 E-value=1.4e+02 Score=23.73 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=42.9
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCC-CccEEEEecCcc
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGG-KVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~-~~d~iv~~~G~G 87 (225)
-++.++.+|++|+.+..+ ++..+.++++ +-...++. .+. ....++.+..++ .+|.+|-++|+
T Consensus 157 ~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~----Ga~~~~~~-~~~--------~~~~~~~~~~~~~g~Dvvid~~g~- 219 (325)
T 3jyn_A 157 ACQWAKALGAKLIGTVSS---PEKAAHAKAL----GAWETIDY-SHE--------DVAKRVLELTDGKKCPVVYDGVGQ- 219 (325)
T ss_dssp HHHHHHHHTCEEEEEESS---HHHHHHHHHH----TCSEEEET-TTS--------CHHHHHHHHTTTCCEEEEEESSCG-
T ss_pred HHHHHHHCCCEEEEEeCC---HHHHHHHHHc----CCCEEEeC-CCc--------cHHHHHHHHhCCCCceEEEECCCh-
Confidence 356678889999888742 3444444433 11222332 111 122344444433 49999999886
Q ss_pred hhHHHHHHHHHhhCCCcEEEEE
Q 027277 88 GTVTGAGRFLKEKNPNIKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~~~vigV 109 (225)
.++ ...++.+.+.-+++-+
T Consensus 220 ~~~---~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 220 DTW---LTSLDSVAPRGLVVSF 238 (325)
T ss_dssp GGH---HHHHTTEEEEEEEEEC
T ss_pred HHH---HHHHHHhcCCCEEEEE
Confidence 332 3445555555566554
No 340
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=20.59 E-value=2.5e+02 Score=21.14 Aligned_cols=69 Identities=17% Similarity=0.062 Sum_probs=34.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++... +...+.+.++. . ...++. . |-.. ......+..++.++. +.+|.+|..+|..
T Consensus 24 a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~-~--~~~~~~-~-Dv~~-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 92 (257)
T 3tpc_A 24 TRMLAQEGATVLGLDLKP--PAGEEPAAELG-A--AVRFRN-A-DVTN-EADATAALAFAKQEF-GHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHTTCEEEEEESSC--C---------------CEEEE-C-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCCh--HHHHHHHHHhC-C--ceEEEE-c-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 345556799988887532 11112222221 1 222221 1 2333 344555666777777 5799999998864
No 341
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=20.57 E-value=3.3e+02 Score=22.17 Aligned_cols=79 Identities=13% Similarity=-0.030 Sum_probs=44.3
Q ss_pred HHHHHHHHcCCEEEEeCC------CCChHHHHHHHHHHHHhCCCeEEeCCCCCCC--C--hHhhHhhhHHHHHHhhCCCc
Q 027277 8 ERRIILRALGAEVYLADP------AVGFEGFVKKGEEILNRTPNGYILGQFENPA--N--PEIHYETTGPEIWNDSGGKV 77 (225)
Q Consensus 8 ~k~~~~~~~GA~v~~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~--~~~g~~t~~~Ei~~Ql~~~~ 77 (225)
.-++.|+.+|+++++++- ..++-+.++.+.+++.+++-+..++.+..+. . ....+...-.+|.+..+..+
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~~~~~~~~~~~~~w~~iA~ryk~~~ 137 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVEVHDATGRDSRSDLDRAVDYWIEMKDALIGKE 137 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCCHHHHHHHHHHHHHTHHHHTTCT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence 467889999999988751 1223456777788888873344443332111 1 02223333345555555555
Q ss_pred cEEEEecCc
Q 027277 78 DAFIAGIGT 86 (225)
Q Consensus 78 d~iv~~~G~ 86 (225)
+.|+.-++.
T Consensus 138 ~~Vi~el~N 146 (345)
T 3jug_A 138 DTVIINIAN 146 (345)
T ss_dssp TTEEEECCT
T ss_pred CeEEEEecC
Confidence 667676553
No 342
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=20.53 E-value=2e+02 Score=19.23 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=26.4
Q ss_pred CccEEEEecCc-chhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 76 KVDAFIAGIGT-GGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 76 ~~d~iv~~~G~-Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.||.|++-..- +..-.-+...++...++++|+.+.....
T Consensus 66 ~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 66 SVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 49999997653 2222345667777788899988865443
No 343
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=20.52 E-value=1.1e+02 Score=26.24 Aligned_cols=22 Identities=41% Similarity=0.708 Sum_probs=14.7
Q ss_pred CccEEEEecC-cchhHHHHHHHH
Q 027277 76 KVDAFIAGIG-TGGTVTGAGRFL 97 (225)
Q Consensus 76 ~~d~iv~~~G-~Gg~~aGi~~~~ 97 (225)
..|.+++..| +|||=+|.+-.+
T Consensus 147 ~~d~f~I~aglGGGTGSG~gp~l 169 (427)
T 3m89_A 147 IVDQFLICLGAGGGVGTGWGSLV 169 (427)
T ss_dssp CCSEEEEEEETTSHHHHHHHHHH
T ss_pred CCCEEEEeeecCCCccccHHHHH
Confidence 5788888877 456656665544
No 344
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=20.51 E-value=2.9e+02 Score=21.07 Aligned_cols=73 Identities=18% Similarity=0.101 Sum_probs=37.8
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC-CCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRT-PNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.+... .+...+...++.... +..+..-+. |... ......+..++.++. +.+|.||..+|..
T Consensus 49 a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~~-~~~v~~~~~~~~~~~-g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 49 ARALVQQGLKVVGCART--VGNIEELAAECKSAGYPGTLIPYRC-DLSN-EEDILSMFSAIRSQH-SGVDICINNAGLA 122 (279)
T ss_dssp HHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCSSEEEEEEC-CTTC-HHHHHHHHHHHHHHH-CCCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEECC--hHHHHHHHHHHHhcCCCceEEEEEe-cCCC-HHHHHHHHHHHHHhC-CCCCEEEECCCCC
Confidence 34455679999888752 222222233332221 122221122 2333 334455556676777 5799999998853
No 345
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=20.50 E-value=3.6e+02 Score=22.12 Aligned_cols=84 Identities=12% Similarity=0.059 Sum_probs=45.6
Q ss_pred HHHHHHHcCCE-EEEeCCCCC-hHHHHH-------HHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccE
Q 027277 9 RRIILRALGAE-VYLADPAVG-FEGFVK-------KGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDA 79 (225)
Q Consensus 9 k~~~~~~~GA~-v~~~~~~~~-~~~~~~-------~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~ 79 (225)
-.+.++.+|++ |+.+++... .+...+ ...++.++- +...++--.++.+ ...+..+.+.++ +++.
T Consensus 179 vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~a-DvV~l~~P~t~~t----~~li~~~~l~~m--k~ga 251 (364)
T 2j6i_A 179 VLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQA-DIVTVNAPLHAGT----KGLINKELLSKF--KKGA 251 (364)
T ss_dssp HHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTC-SEEEECCCCSTTT----TTCBCHHHHTTS--CTTE
T ss_pred HHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcC-CEEEECCCCChHH----HHHhCHHHHhhC--CCCC
Confidence 34566788996 988875321 111110 123344443 4554432222222 223345667777 3688
Q ss_pred EEEecCcchhH--HHHHHHHHh
Q 027277 80 FIAGIGTGGTV--TGAGRFLKE 99 (225)
Q Consensus 80 iv~~~G~Gg~~--aGi~~~~k~ 99 (225)
+++-+|.|+.+ .-+..+++.
T Consensus 252 ~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 252 WLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp EEEECSCGGGBCHHHHHHHHHH
T ss_pred EEEECCCCchhCHHHHHHHHHc
Confidence 99999998765 445556654
No 346
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=20.38 E-value=1.5e+02 Score=22.66 Aligned_cols=50 Identities=20% Similarity=0.215 Sum_probs=31.0
Q ss_pred HhhhHHHHHHhhC---CCcc--EEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 62 YETTGPEIWNDSG---GKVD--AFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 62 ~~t~~~Ei~~Ql~---~~~d--~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
++.++..|+..+. .+|. .+=+++|+|++..=++.. ..+.-+|+||+.+..
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~---v~~~G~V~avD~s~~ 112 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDI---IELNGKAYGVEFSPR 112 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHH---HTTTSEEEEEECCHH
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHH---hCCCCEEEEEECcHH
Confidence 4445666665553 2333 455678888776554443 356779999998653
No 347
>3crv_A XPD/RAD3 related DNA helicase; XPD helicase DNA repair cancer aging, hydrolase; HET: FLC; 2.00A {Sulfolobus acidocaldarius} PDB: 3crw_1*
Probab=20.30 E-value=1.2e+02 Score=26.43 Aligned_cols=53 Identities=15% Similarity=0.026 Sum_probs=37.0
Q ss_pred HhhHhhhHHHHHHhhCCCccE-EEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 59 EIHYETTGPEIWNDSGGKVDA-FIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 59 ~~g~~t~~~Ei~~Ql~~~~d~-iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
..+|.+++..+.+.+...-|. +-.|+|+|=|++-+.-.+. ...+++-+.|...
T Consensus 5 r~~Q~~~~~~v~~~l~~~~~~~~~a~TGtGKT~~~l~p~l~---~~~~v~i~~pt~~ 58 (551)
T 3crv_A 5 RDWQEKLKDKVIEGLRNNFLVALNAPTGSGKTLFSLLVSLE---VKPKVLFVVRTHN 58 (551)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEECCTTSSHHHHHHHHHHH---HCSEEEEEESSGG
T ss_pred CHHHHHHHHHHHHHHHcCCcEEEECCCCccHHHHHHHHHHh---CCCeEEEEcCCHH
Confidence 357888888887766333343 3468999999988887776 3467777777665
No 348
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=20.15 E-value=1.1e+02 Score=23.21 Aligned_cols=18 Identities=22% Similarity=0.285 Sum_probs=9.1
Q ss_pred EEecCcchhHHHHHHHHH
Q 027277 81 IAGIGTGGTVTGAGRFLK 98 (225)
Q Consensus 81 v~~~G~Gg~~aGi~~~~k 98 (225)
++++++|.|...++..+.
T Consensus 31 ~i~ls~G~T~~~~~~~L~ 48 (234)
T 2ri0_A 31 TLGLATGSTPLELYKEIR 48 (234)
T ss_dssp EEEECCSSTTHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHH
Confidence 344445555555555554
No 349
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=20.14 E-value=1.8e+02 Score=23.63 Aligned_cols=81 Identities=9% Similarity=-0.027 Sum_probs=43.9
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcch
Q 027277 9 RRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGG 88 (225)
Q Consensus 9 k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~Gg 88 (225)
-++..+.+|++|+.+.. ++..+.+ ++.+-...++. .++. ...++.+..++.+|.+|-++|+..
T Consensus 181 a~qla~~~Ga~Vi~~~~----~~~~~~~----~~lGa~~vi~~-~~~~--------~~~~v~~~t~g~~d~v~d~~g~~~ 243 (371)
T 3gqv_A 181 TMQMLRLSGYIPIATCS----PHNFDLA----KSRGAEEVFDY-RAPN--------LAQTIRTYTKNNLRYALDCITNVE 243 (371)
T ss_dssp HHHHHHHTTCEEEEEEC----GGGHHHH----HHTTCSEEEET-TSTT--------HHHHHHHHTTTCCCEEEESSCSHH
T ss_pred HHHHHHHCCCEEEEEeC----HHHHHHH----HHcCCcEEEEC-CCch--------HHHHHHHHccCCccEEEECCCchH
Confidence 45677889999887642 2333333 44421223332 2211 223444444456999999999865
Q ss_pred hHHHHHHHHHhh-CCCcEEEEE
Q 027277 89 TVTGAGRFLKEK-NPNIKVYGI 109 (225)
Q Consensus 89 ~~aGi~~~~k~~-~~~~~vigV 109 (225)
++.- .++.+ .+.-+++.+
T Consensus 244 ~~~~---~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 244 STTF---CFAAIGRAGGHYVSL 262 (371)
T ss_dssp HHHH---HHHHSCTTCEEEEES
T ss_pred HHHH---HHHHhhcCCCEEEEE
Confidence 5543 34444 245566655
No 350
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=20.12 E-value=3.5e+02 Score=21.84 Aligned_cols=84 Identities=17% Similarity=-0.001 Sum_probs=43.7
Q ss_pred HHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCCCeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 9 RRIILRALGA-EVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 9 k~~~~~~~GA-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
-++..+.+|| +|+.++.+ ++..+.+ ++.+-...++.-+.... +..++.+..++.+|.||-++|+.
T Consensus 211 aiqlak~~Ga~~Vi~~~~~---~~~~~~a----~~lGa~~vi~~~~~~~~-------~~~~v~~~~~~g~Dvvid~~G~~ 276 (376)
T 1e3i_A 211 AIIGCKIAGASRIIAIDIN---GEKFPKA----KALGATDCLNPRELDKP-------VQDVITELTAGGVDYSLDCAGTA 276 (376)
T ss_dssp HHHHHHHTTCSEEEEECSC---GGGHHHH----HHTTCSEEECGGGCSSC-------HHHHHHHHHTSCBSEEEESSCCH
T ss_pred HHHHHHHcCCCeEEEEcCC---HHHHHHH----HHhCCcEEEccccccch-------HHHHHHHHhCCCccEEEECCCCH
Confidence 3567788999 78888753 2333333 33321222332110011 12223222233699999999876
Q ss_pred hhHHHHHHHHHhhCCC-cEEEEE
Q 027277 88 GTVTGAGRFLKEKNPN-IKVYGI 109 (225)
Q Consensus 88 g~~aGi~~~~k~~~~~-~~vigV 109 (225)
.++ ...++.+.+. -+++-+
T Consensus 277 ~~~---~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 277 QTL---KAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHH---HHHHHTBCTTTCEEEEC
T ss_pred HHH---HHHHHHhhcCCCEEEEE
Confidence 554 3455555565 566554
No 351
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=20.08 E-value=2.9e+02 Score=20.84 Aligned_cols=68 Identities=18% Similarity=0.098 Sum_probs=37.5
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-CeEEeCCCCCCCChHhhHhhhHHHHHHhhCCCccEEEEecCcc
Q 027277 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP-NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 87 (225)
Q Consensus 10 ~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~g~~t~~~Ei~~Ql~~~~d~iv~~~G~G 87 (225)
.+.+...|++|+.++.. . +.. .+..++.+ ...++ +. +... ......+..++.+++ +.+|.+|..+|..
T Consensus 22 a~~l~~~G~~V~~~~r~--~-~~~---~~~~~~~~~~~~~~-~~-D~~~-~~~~~~~~~~~~~~~-g~iD~lv~nAg~~ 90 (254)
T 1hdc_A 22 ARQAVAAGARVVLADVL--D-EEG---AATARELGDAARYQ-HL-DVTI-EEDWQRVVAYAREEF-GSVDGLVNNAGIS 90 (254)
T ss_dssp HHHHHHTTCEEEEEESC--H-HHH---HHHHHTTGGGEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEEeCC--H-HHH---HHHHHHhCCceeEE-Ee-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 34556679999988753 1 222 22222211 22222 22 2333 344455666777777 5799999998854
No 352
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=20.07 E-value=1e+02 Score=25.14 Aligned_cols=34 Identities=38% Similarity=0.728 Sum_probs=23.8
Q ss_pred EEEEecCcchhHHHHHHHHHhhCCCcEEEEEeCCCC
Q 027277 79 AFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 114 (225)
Q Consensus 79 ~iv~~~G~Gg~~aGi~~~~k~~~~~~~vigVe~~~~ 114 (225)
.||+..|.+|+.+ +..++...++.+|.-||+...
T Consensus 5 VvIIG~G~AG~~a--A~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 5 VVVVGGGTGGATA--AKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEECCSHHHHHH--HHHHHHHCTTSEEEEECSCSS
T ss_pred EEEECCcHHHHHH--HHHHHhcCcCCeEEEEeCCCC
Confidence 4677766666644 345667788889999998753
Done!