Query 027287
Match_columns 225
No_of_seqs 146 out of 1192
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 12:28:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027287.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027287hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydh_A AT5G11950; structural g 100.0 6E-58 2.1E-62 392.4 20.7 203 13-215 3-205 (216)
2 2a33_A Hypothetical protein; s 100.0 2.9E-57 1E-61 387.9 21.6 208 10-217 4-211 (215)
3 3sbx_A Putative uncharacterize 100.0 4.5E-56 1.6E-60 373.7 21.0 178 17-195 11-188 (189)
4 3qua_A Putative uncharacterize 100.0 2.4E-55 8.3E-60 371.9 19.6 181 14-195 17-197 (199)
5 1t35_A Hypothetical protein YV 100.0 8E-55 2.7E-59 366.6 17.4 182 19-200 1-182 (191)
6 1wek_A Hypothetical protein TT 100.0 1.6E-49 5.5E-54 340.4 19.6 179 19-200 37-216 (217)
7 3gh1_A Predicted nucleotide-bi 100.0 1.1E-49 3.9E-54 367.4 19.5 201 15-221 142-366 (462)
8 1weh_A Conserved hypothetical 100.0 5.7E-49 1.9E-53 325.7 16.6 168 19-196 1-170 (171)
9 3bq9_A Predicted rossmann fold 100.0 2.5E-47 8.5E-52 353.7 18.8 199 16-221 141-364 (460)
10 1rcu_A Conserved hypothetical 100.0 2.3E-44 7.8E-49 303.8 17.1 168 15-198 19-193 (195)
11 2iz6_A Molybdenum cofactor car 100.0 3.2E-41 1.1E-45 280.5 11.8 164 15-198 9-172 (176)
12 3maj_A DNA processing chain A; 99.4 3.8E-12 1.3E-16 116.6 16.9 157 19-196 127-303 (382)
13 3uqz_A DNA processing protein 99.4 7.9E-12 2.7E-16 110.6 16.0 156 19-194 106-280 (288)
14 3imk_A Putative molybdenum car 97.8 0.0003 1E-08 56.7 11.1 96 53-155 10-110 (158)
15 2nx2_A Hypothetical protein YP 97.7 0.00077 2.6E-08 55.4 13.8 131 18-153 1-169 (181)
16 2khz_A C-MYC-responsive protei 95.4 0.045 1.5E-06 43.9 7.4 81 105-198 67-149 (165)
17 2f62_A Nucleoside 2-deoxyribos 94.4 0.043 1.5E-06 44.1 4.7 89 104-200 56-160 (161)
18 2o6l_A UDP-glucuronosyltransfe 94.1 1.4 4.7E-05 33.8 12.9 64 114-198 85-152 (170)
19 3ehd_A Uncharacterized conserv 94.1 0.18 6E-06 40.6 7.7 85 104-198 58-161 (162)
20 4fyk_A Deoxyribonucleoside 5'- 92.5 0.18 6.1E-06 40.2 5.2 81 104-200 57-142 (152)
21 1f8y_A Nucleoside 2-deoxyribos 92.0 0.21 7.2E-06 39.8 5.1 43 106-154 69-115 (157)
22 2p6p_A Glycosyl transferase; X 91.4 5.3 0.00018 34.3 14.0 67 112-198 276-345 (384)
23 3h4t_A Glycosyltransferase GTF 90.4 3.5 0.00012 36.3 12.2 129 49-199 220-351 (404)
24 3rsc_A CALG2; TDP, enediyne, s 90.2 3.1 0.00011 36.2 11.5 70 111-199 309-380 (415)
25 3otg_A CALG1; calicheamicin, T 90.0 8.6 0.0003 33.1 15.2 69 111-198 304-374 (412)
26 3ek6_A Uridylate kinase; UMPK 89.5 5.6 0.00019 33.3 12.1 126 18-158 8-172 (243)
27 2iya_A OLEI, oleandomycin glyc 88.8 5.7 0.00019 34.8 12.2 67 112-198 318-387 (424)
28 3s2u_A UDP-N-acetylglucosamine 88.4 3.7 0.00013 35.9 10.6 140 18-198 179-322 (365)
29 3ia7_A CALG4; glycosysltransfe 88.4 7.6 0.00026 33.2 12.5 70 111-198 293-364 (402)
30 3hbm_A UDP-sugar hydrolase; PS 87.7 4.4 0.00015 34.8 10.4 31 112-153 222-252 (282)
31 1iir_A Glycosyltransferase GTF 87.2 11 0.00039 32.9 13.1 128 44-197 231-366 (415)
32 2yjn_A ERYCIII, glycosyltransf 86.5 4.2 0.00014 36.1 9.9 67 112-198 332-401 (441)
33 1s2d_A Purine trans deoxyribos 86.4 1.1 3.7E-05 35.9 5.4 41 106-152 72-116 (167)
34 1rrv_A Glycosyltransferase GTF 86.3 7.8 0.00027 33.9 11.6 131 43-197 229-367 (416)
35 3rpz_A ADP/ATP-dependent NAD(P 84.3 0.87 3E-05 39.4 4.2 102 49-157 29-136 (279)
36 4fzr_A SSFS6; structural genom 81.8 4.4 0.00015 35.1 7.8 33 110-152 295-327 (398)
37 3hbf_A Flavonoid 3-O-glucosylt 80.5 8.8 0.0003 35.2 9.6 73 111-199 339-413 (454)
38 3dmy_A Protein FDRA; predicted 79.2 16 0.00055 34.0 11.0 76 116-200 329-414 (480)
39 3ufx_B Succinyl-COA synthetase 78.5 8.9 0.00031 34.6 8.9 122 62-214 258-383 (397)
40 1ybd_A Uridylate kinase; alpha 78.5 14 0.00049 30.2 9.6 41 116-158 126-170 (239)
41 2iyf_A OLED, oleandomycin glyc 78.4 14 0.00049 32.0 10.1 32 111-152 295-326 (430)
42 2gk4_A Conserved hypothetical 77.8 4.2 0.00014 34.3 6.0 70 52-124 5-93 (232)
43 3oti_A CALG3; calicheamicin, T 75.3 17 0.00059 31.3 9.6 31 112-152 296-326 (398)
44 3rss_A Putative uncharacterize 71.7 13 0.00045 34.6 8.3 102 50-155 244-357 (502)
45 2pq6_A UDP-glucuronosyl/UDP-gl 71.7 16 0.00055 33.1 8.8 71 112-199 366-438 (482)
46 4a7w_A Uridylate kinase; trans 69.9 46 0.0016 27.5 13.9 126 18-158 6-171 (240)
47 3nwy_A Uridylate kinase; allos 67.6 58 0.002 27.8 13.7 127 18-159 49-213 (281)
48 3tsa_A SPNG, NDP-rhamnosyltran 65.4 9.3 0.00032 32.7 5.6 68 113-199 284-355 (391)
49 2buf_A Acetylglutamate kinase; 65.3 11 0.00038 32.4 6.0 41 19-60 26-69 (300)
50 1z9d_A Uridylate kinase, UK, U 64.2 60 0.002 26.8 13.2 126 19-158 7-171 (252)
51 2an1_A Putative kinase; struct 63.4 14 0.0005 31.1 6.3 59 19-81 5-93 (292)
52 3s2u_A UDP-N-acetylglucosamine 63.1 47 0.0016 28.7 9.8 122 20-156 3-126 (365)
53 2g1u_A Hypothetical protein TM 60.4 40 0.0014 25.2 7.8 76 51-129 20-98 (155)
54 4amg_A Snogd; transferase, pol 59.9 42 0.0014 28.5 8.8 31 112-152 301-331 (400)
55 2c1x_A UDP-glucose flavonoid 3 59.4 45 0.0015 30.0 9.2 137 43-198 261-410 (456)
56 4eg0_A D-alanine--D-alanine li 59.1 13 0.00044 31.5 5.2 45 18-62 12-56 (317)
57 4ffl_A PYLC; amino acid, biosy 58.8 45 0.0016 28.5 8.8 68 54-126 5-74 (363)
58 2a1f_A Uridylate kinase; PYRH, 58.6 75 0.0026 26.0 14.0 125 19-158 8-171 (247)
59 1v4v_A UDP-N-acetylglucosamine 58.6 22 0.00075 30.1 6.7 67 108-199 267-333 (376)
60 1pl8_A Human sorbitol dehydrog 57.3 56 0.0019 28.0 9.2 83 51-136 173-263 (356)
61 4axs_A Carbamate kinase; oxido 57.3 6.1 0.00021 35.0 2.9 45 16-60 21-72 (332)
62 3u43_A Colicin-E2 immunity pro 56.5 5.8 0.0002 29.0 2.2 50 153-206 29-83 (94)
63 2hna_A Protein MIOC, flavodoxi 56.4 16 0.00054 27.3 4.8 33 20-55 2-34 (147)
64 1f0k_A MURG, UDP-N-acetylgluco 55.5 89 0.003 25.9 14.5 71 111-197 250-322 (364)
65 2i2c_A Probable inorganic poly 55.1 30 0.001 29.1 6.8 56 21-81 2-67 (272)
66 1rjw_A ADH-HT, alcohol dehydro 55.0 49 0.0017 28.2 8.3 140 51-196 166-325 (339)
67 3f6r_A Flavodoxin; FMN binding 54.6 17 0.00058 27.0 4.7 33 19-54 1-33 (148)
68 2jzc_A UDP-N-acetylglucosamine 53.7 14 0.00048 30.7 4.4 53 111-173 127-181 (224)
69 3ff4_A Uncharacterized protein 53.5 13 0.00045 27.9 3.8 34 17-55 2-35 (122)
70 1e3i_A Alcohol dehydrogenase, 51.2 1.2E+02 0.004 26.1 10.3 143 51-196 197-366 (376)
71 2f9f_A First mannosyl transfer 50.6 77 0.0026 23.8 8.6 70 108-199 90-161 (177)
72 1yqd_A Sinapyl alcohol dehydro 50.4 78 0.0027 27.3 9.0 139 51-196 189-346 (366)
73 2q5c_A NTRC family transcripti 50.2 30 0.001 27.8 5.8 67 10-82 85-167 (196)
74 3gms_A Putative NADPH:quinone 49.7 23 0.00078 30.3 5.3 35 163-197 286-320 (340)
75 1nns_A L-asparaginase II; amid 49.0 36 0.0012 29.8 6.5 39 112-153 76-114 (326)
76 3r1i_A Short-chain type dehydr 47.9 65 0.0022 26.6 7.8 55 19-81 32-86 (276)
77 3s2e_A Zinc-containing alcohol 47.8 55 0.0019 27.7 7.5 83 51-136 168-253 (340)
78 2vch_A Hydroquinone glucosyltr 47.3 46 0.0016 30.2 7.2 72 111-198 351-427 (480)
79 3ip1_A Alcohol dehydrogenase, 46.9 69 0.0023 28.0 8.2 139 51-195 215-384 (404)
80 4hwg_A UDP-N-acetylglucosamine 46.0 1.5E+02 0.0052 25.9 12.3 75 99-199 265-341 (385)
81 3qwb_A Probable quinone oxidor 45.6 56 0.0019 27.6 7.2 143 51-197 150-322 (334)
82 1wv2_A Thiazole moeity, thiazo 45.5 96 0.0033 26.6 8.4 109 21-153 107-217 (265)
83 2qv7_A Diacylglycerol kinase D 45.4 20 0.00067 31.0 4.2 42 42-84 71-114 (337)
84 2yxb_A Coenzyme B12-dependent 45.1 1E+02 0.0035 23.7 8.0 59 18-81 17-75 (161)
85 1p3y_1 MRSD protein; flavoprot 45.0 39 0.0013 27.4 5.7 86 114-200 80-186 (194)
86 2va1_A Uridylate kinase; UMPK, 44.9 1.3E+02 0.0045 24.8 14.9 46 111-158 138-187 (256)
87 3h7a_A Short chain dehydrogena 44.6 71 0.0024 25.8 7.4 55 19-81 7-61 (252)
88 1gs5_A Acetylglutamate kinase; 44.5 13 0.00044 31.0 2.8 40 21-60 5-46 (258)
89 1id1_A Putative potassium chan 44.2 34 0.0012 25.5 5.0 73 50-126 3-82 (153)
90 2ap9_A NAG kinase, acetylgluta 44.1 11 0.00037 32.3 2.3 41 19-60 25-68 (299)
91 2acv_A Triterpene UDP-glucosyl 43.6 31 0.0011 31.1 5.4 141 41-198 264-423 (463)
92 2xci_A KDO-transferase, 3-deox 43.4 1.3E+02 0.0043 25.9 9.3 70 109-199 271-345 (374)
93 3jv7_A ADH-A; dehydrogenase, n 43.2 1.1E+02 0.0037 25.9 8.7 141 51-197 173-335 (345)
94 3fpc_A NADP-dependent alcohol 43.2 32 0.0011 29.5 5.2 143 51-196 168-339 (352)
95 3uko_A Alcohol dehydrogenase c 42.6 1.2E+02 0.004 26.2 8.9 83 51-136 195-284 (378)
96 2cf5_A Atccad5, CAD, cinnamyl 41.6 66 0.0022 27.6 7.0 137 51-196 182-339 (357)
97 1wls_A L-asparaginase; structu 41.4 40 0.0014 29.5 5.6 51 114-166 72-127 (328)
98 2bon_A Lipid kinase; DAG kinas 41.2 26 0.0009 30.2 4.4 41 43-84 74-118 (332)
99 3ico_A 6PGL, 6-phosphogluconol 41.0 99 0.0034 26.1 7.9 43 114-157 53-95 (268)
100 3k35_A NAD-dependent deacetyla 40.7 1.3E+02 0.0045 26.3 8.8 74 106-199 197-270 (318)
101 4e3z_A Putative oxidoreductase 40.7 1.1E+02 0.0039 24.6 8.2 12 115-126 104-115 (272)
102 2bty_A Acetylglutamate kinase; 40.5 14 0.00049 31.2 2.5 40 20-60 22-64 (282)
103 1yob_A Flavodoxin 2, flavodoxi 40.5 46 0.0016 25.7 5.3 38 18-55 87-125 (179)
104 3s40_A Diacylglycerol kinase; 40.2 29 0.00099 29.5 4.4 42 41-84 54-97 (304)
105 3gaf_A 7-alpha-hydroxysteroid 40.1 62 0.0021 26.2 6.4 55 19-81 12-66 (256)
106 3qvo_A NMRA family protein; st 39.8 1.4E+02 0.0047 23.5 12.2 75 52-129 25-102 (236)
107 2fp4_B Succinyl-COA ligase [GD 39.4 2.1E+02 0.0071 25.5 10.3 71 115-197 317-391 (395)
108 3ca8_A Protein YDCF; two domai 39.2 26 0.00091 29.8 4.0 38 114-156 35-73 (266)
109 3s99_A Basic membrane lipoprot 39.0 42 0.0014 29.5 5.4 41 38-81 195-235 (356)
110 1iow_A DD-ligase, DDLB, D-ALA\ 39.0 45 0.0015 27.4 5.4 39 20-58 3-41 (306)
111 2gek_A Phosphatidylinositol ma 38.6 50 0.0017 27.8 5.7 41 15-55 16-56 (406)
112 1eiw_A Hypothetical protein MT 38.6 23 0.0008 26.2 3.1 67 113-199 36-109 (111)
113 1jfl_A Aspartate racemase; alp 38.4 56 0.0019 26.3 5.8 43 41-83 64-123 (228)
114 4a2c_A Galactitol-1-phosphate 38.1 1.3E+02 0.0043 25.3 8.2 30 51-82 162-192 (346)
115 2k0z_A Uncharacterized protein 37.9 58 0.002 22.9 5.2 35 17-59 54-90 (110)
116 2ark_A Flavodoxin; FMN, struct 37.8 26 0.00089 27.3 3.5 34 18-54 3-37 (188)
117 3m9w_A D-xylose-binding peripl 37.7 1.6E+02 0.0056 23.8 11.0 38 18-57 1-38 (313)
118 2him_A L-asparaginase 1; hydro 37.5 63 0.0022 28.7 6.3 39 113-153 99-137 (358)
119 3gaz_A Alcohol dehydrogenase s 37.4 1.9E+02 0.0064 24.5 10.4 50 162-212 286-337 (343)
120 3tx2_A Probable 6-phosphogluco 37.2 1.5E+02 0.005 24.6 8.3 43 114-157 37-79 (251)
121 4fu0_A D-alanine--D-alanine li 37.2 23 0.00078 30.8 3.3 36 20-55 4-39 (357)
122 3ksu_A 3-oxoacyl-acyl carrier 36.9 67 0.0023 26.2 6.1 56 18-81 10-68 (262)
123 3ot5_A UDP-N-acetylglucosamine 36.8 68 0.0023 28.2 6.5 74 99-198 284-359 (403)
124 2brx_A Uridylate kinase; UMP k 36.7 11 0.00038 31.3 1.1 41 20-60 20-65 (244)
125 4b7c_A Probable oxidoreductase 36.4 1.1E+02 0.0037 25.7 7.6 32 51-83 151-182 (336)
126 2jjm_A Glycosyl transferase, g 36.4 1.2E+02 0.0043 25.4 8.0 68 111-199 280-349 (394)
127 3llv_A Exopolyphosphatase-rela 36.3 1.2E+02 0.004 21.8 8.4 37 113-153 68-104 (141)
128 3r8s_O 50S ribosomal protein L 36.2 76 0.0026 23.6 5.7 39 38-76 68-114 (116)
129 3s8m_A Enoyl-ACP reductase; ro 36.2 67 0.0023 29.2 6.4 29 52-81 63-92 (422)
130 3r6d_A NAD-dependent epimerase 36.1 88 0.003 24.2 6.5 13 113-125 71-83 (221)
131 3awd_A GOX2181, putative polyo 36.0 94 0.0032 24.7 6.8 65 2-81 3-67 (260)
132 2hcy_A Alcohol dehydrogenase 1 36.0 68 0.0023 27.3 6.2 32 51-83 171-202 (347)
133 1hdo_A Biliverdin IX beta redu 35.9 1.4E+02 0.0047 22.4 9.3 72 53-127 6-79 (206)
134 1wv9_A Rhodanese homolog TT165 35.8 36 0.0012 23.2 3.6 26 20-53 54-79 (94)
135 3hly_A Flavodoxin-like domain; 35.6 35 0.0012 26.0 3.9 30 21-53 2-31 (161)
136 3iwh_A Rhodanese-like domain p 35.5 60 0.0021 23.0 4.9 32 17-56 54-85 (103)
137 2d8a_A PH0655, probable L-thre 35.4 1.4E+02 0.0048 25.3 8.1 32 51-84 169-201 (348)
138 1u7z_A Coenzyme A biosynthesis 35.3 59 0.002 27.0 5.4 68 52-125 10-97 (226)
139 4fn4_A Short chain dehydrogena 35.3 85 0.0029 26.1 6.5 43 40-82 20-62 (254)
140 3se7_A VANA; alpha-beta struct 35.2 26 0.00088 30.2 3.3 38 19-56 3-40 (346)
141 2ako_A Glutamate 5-kinase; str 35.1 29 0.001 28.6 3.5 35 25-59 8-47 (251)
142 1e3j_A NADP(H)-dependent ketos 34.9 2.1E+02 0.0071 24.2 10.2 83 51-136 170-261 (352)
143 4pga_A Glutaminase-asparaginas 34.8 54 0.0018 28.9 5.4 48 115-165 90-142 (337)
144 3ged_A Short-chain dehydrogena 34.7 40 0.0014 28.1 4.3 17 41-57 16-32 (247)
145 3uxy_A Short-chain dehydrogena 34.6 1E+02 0.0034 25.2 6.8 30 51-81 29-58 (266)
146 3ucx_A Short chain dehydrogena 34.5 1.4E+02 0.0047 24.1 7.7 55 19-81 11-65 (264)
147 3nxk_A Cytoplasmic L-asparagin 34.3 81 0.0028 27.7 6.4 37 114-153 87-123 (334)
148 3uf0_A Short-chain dehydrogena 33.9 1.6E+02 0.0055 24.0 8.0 53 20-81 32-84 (273)
149 3qiv_A Short-chain dehydrogena 33.8 1.8E+02 0.006 23.0 9.0 20 40-59 22-41 (253)
150 2dq4_A L-threonine 3-dehydroge 33.8 1.7E+02 0.0059 24.6 8.4 142 51-196 166-331 (343)
151 1ykg_A SIR-FP, sulfite reducta 33.8 13 0.00043 28.8 0.9 35 16-53 6-40 (167)
152 3l77_A Short-chain alcohol deh 33.7 1.3E+02 0.0043 23.6 7.1 34 19-60 2-35 (235)
153 2pju_A Propionate catabolism o 33.0 64 0.0022 26.6 5.3 67 9-81 96-178 (225)
154 4b79_A PA4098, probable short- 33.0 2.1E+02 0.0071 23.6 9.0 29 52-81 13-41 (242)
155 3v2d_S 50S ribosomal protein L 33.0 54 0.0018 24.4 4.3 40 37-76 63-110 (112)
156 3uhf_A Glutamate racemase; str 32.8 93 0.0032 26.4 6.4 47 34-82 69-117 (274)
157 1p9o_A Phosphopantothenoylcyst 32.8 63 0.0022 28.2 5.4 32 50-81 37-85 (313)
158 2d6f_A Glutamyl-tRNA(Gln) amid 32.7 69 0.0024 29.3 5.9 48 115-165 167-219 (435)
159 4h3k_B RNA polymerase II subun 32.6 56 0.0019 27.2 4.7 38 16-60 22-60 (214)
160 4ibo_A Gluconate dehydrogenase 32.5 1E+02 0.0036 25.2 6.6 42 40-81 39-80 (271)
161 3ll5_A Gamma-glutamyl kinase r 32.3 16 0.00053 30.6 1.4 31 126-158 144-174 (249)
162 3zu3_A Putative reductase YPO4 32.3 86 0.0029 28.4 6.4 29 52-81 49-78 (405)
163 3sju_A Keto reductase; short-c 32.2 94 0.0032 25.5 6.3 19 40-58 37-55 (279)
164 1o7j_A L-asparaginase; atomic 32.2 86 0.003 27.3 6.2 36 115-153 85-120 (327)
165 3k5w_A Carbohydrate kinase; 11 32.1 1.1E+02 0.0038 28.1 7.2 117 49-196 235-353 (475)
166 2a5l_A Trp repressor binding p 32.0 41 0.0014 25.9 3.8 33 19-54 5-37 (200)
167 4imr_A 3-oxoacyl-(acyl-carrier 32.0 82 0.0028 25.9 5.9 42 40-81 46-87 (275)
168 1nup_A FKSG76; NAD biosynthesi 31.9 84 0.0029 26.0 5.9 36 16-51 2-37 (252)
169 2wlt_A L-asparaginase; hydrola 31.7 49 0.0017 29.0 4.6 36 115-153 85-120 (332)
170 2ij9_A Uridylate kinase; struc 31.6 39 0.0013 27.1 3.7 39 22-60 4-43 (219)
171 1f4p_A Flavodoxin; electron tr 31.6 28 0.00097 25.6 2.6 31 21-54 2-32 (147)
172 2ogx_B Molybdenum storage prot 31.5 35 0.0012 28.7 3.5 40 21-60 38-80 (270)
173 1uuf_A YAHK, zinc-type alcohol 31.4 82 0.0028 27.3 6.0 32 51-84 196-227 (369)
174 2an1_A Putative kinase; struct 31.4 52 0.0018 27.6 4.5 35 112-152 60-94 (292)
175 2ogx_A Molybdenum storage prot 31.4 14 0.00047 31.4 0.9 31 126-158 167-197 (276)
176 3l6u_A ABC-type sugar transpor 31.3 2E+02 0.0067 22.9 12.0 39 16-56 5-43 (293)
177 4hp8_A 2-deoxy-D-gluconate 3-d 31.3 1.3E+02 0.0046 24.9 7.1 60 15-83 4-63 (247)
178 2wc1_A Flavodoxin; electron tr 31.2 49 0.0017 25.5 4.1 38 18-55 88-126 (182)
179 4g81_D Putative hexonate dehyd 31.2 1.3E+02 0.0044 25.0 7.0 55 20-81 9-63 (255)
180 3oc6_A 6-phosphogluconolactona 31.1 1.5E+02 0.0052 24.5 7.4 44 113-157 36-79 (248)
181 1ae1_A Tropinone reductase-I; 31.1 1.7E+02 0.0059 23.7 7.7 33 19-59 21-53 (273)
182 3fni_A Putative diflavin flavo 31.0 58 0.002 24.8 4.4 31 20-53 5-35 (159)
183 4eez_A Alcohol dehydrogenase 1 30.9 1.6E+02 0.0056 24.6 7.8 37 158-197 292-328 (348)
184 3tfo_A Putative 3-oxoacyl-(acy 30.8 92 0.0032 25.6 6.0 54 20-81 5-58 (264)
185 3qy9_A DHPR, dihydrodipicolina 30.7 89 0.003 26.0 5.8 15 41-55 16-30 (243)
186 1oi7_A Succinyl-COA synthetase 30.7 2E+02 0.0069 24.2 8.2 87 104-197 186-286 (288)
187 3e5n_A D-alanine-D-alanine lig 30.6 33 0.0011 30.3 3.3 38 19-56 22-59 (386)
188 1z0s_A Probable inorganic poly 30.6 58 0.002 27.9 4.7 52 20-82 30-98 (278)
189 3i12_A D-alanine-D-alanine lig 30.5 34 0.0012 29.8 3.3 37 20-56 4-40 (364)
190 3pfn_A NAD kinase; structural 30.5 1.1E+02 0.0038 27.2 6.7 61 18-82 37-139 (365)
191 3r5x_A D-alanine--D-alanine li 30.5 21 0.00073 29.7 1.9 39 19-57 3-41 (307)
192 3npg_A Uncharacterized DUF364 30.5 84 0.0029 26.4 5.7 69 111-196 160-232 (249)
193 3fro_A GLGA glycogen synthase; 30.3 64 0.0022 27.3 5.0 38 18-55 1-39 (439)
194 3zqu_A Probable aromatic acid 30.3 21 0.00072 29.4 1.8 78 116-196 95-184 (209)
195 3tox_A Short chain dehydrogena 30.3 2.3E+02 0.0077 23.2 9.4 103 18-139 7-117 (280)
196 2j5v_A Glutamate 5-kinase; pro 30.2 2.1E+02 0.0071 25.2 8.5 31 126-158 146-176 (367)
197 1agx_A Glutaminase-asparaginas 30.0 96 0.0033 27.1 6.1 49 115-166 82-135 (331)
198 4fn4_A Short chain dehydrogena 30.0 53 0.0018 27.4 4.3 30 51-81 8-37 (254)
199 4gx0_A TRKA domain protein; me 29.9 3.2E+02 0.011 24.8 10.2 99 42-151 341-441 (565)
200 3v8b_A Putative dehydrogenase, 29.8 1.4E+02 0.0046 24.6 6.9 17 41-57 42-58 (283)
201 1wsa_A Asparaginase, asparagin 29.8 49 0.0017 28.9 4.2 49 115-166 83-136 (330)
202 1jvb_A NAD(H)-dependent alcoho 29.6 44 0.0015 28.5 3.8 32 51-83 172-204 (347)
203 3qhp_A Type 1 capsular polysac 29.5 1.6E+02 0.0054 21.2 7.7 70 108-199 67-139 (166)
204 4fgs_A Probable dehydrogenase 29.4 55 0.0019 27.7 4.3 38 41-81 43-80 (273)
205 1zq1_A Glutamyl-tRNA(Gln) amid 29.3 1E+02 0.0035 28.2 6.4 50 115-166 168-222 (438)
206 3dou_A Ribosomal RNA large sub 29.3 68 0.0023 25.0 4.7 39 39-81 9-53 (191)
207 3ic5_A Putative saccharopine d 29.3 1.3E+02 0.0045 20.3 6.7 34 113-152 67-100 (118)
208 4gkb_A 3-oxoacyl-[acyl-carrier 29.3 55 0.0019 27.3 4.3 41 41-82 21-61 (258)
209 4ici_A Putative flavoprotein; 29.2 1.5E+02 0.0053 22.6 6.7 80 113-197 85-168 (171)
210 3oid_A Enoyl-[acyl-carrier-pro 29.2 1.1E+02 0.0037 24.8 6.1 56 18-81 3-59 (258)
211 2hy7_A Glucuronosyltransferase 28.9 66 0.0023 28.0 5.0 84 107-212 276-365 (406)
212 3jyn_A Quinone oxidoreductase; 28.9 86 0.0029 26.3 5.6 33 164-197 283-315 (325)
213 1e4e_A Vancomycin/teicoplanin 28.7 38 0.0013 28.9 3.3 37 20-56 4-40 (343)
214 4dzz_A Plasmid partitioning pr 28.7 72 0.0025 24.3 4.7 34 19-55 1-34 (206)
215 3lp6_A Phosphoribosylaminoimid 28.7 2.3E+02 0.0077 22.7 7.8 46 114-166 61-107 (174)
216 3d40_A FOMA protein; fosfomyci 28.6 82 0.0028 26.6 5.4 41 21-62 25-77 (286)
217 3c48_A Predicted glycosyltrans 28.2 1.6E+02 0.0055 25.0 7.3 72 107-199 317-390 (438)
218 3beo_A UDP-N-acetylglucosamine 28.1 2.5E+02 0.0086 23.1 15.3 66 108-198 275-340 (375)
219 3ou5_A Serine hydroxymethyltra 27.9 24 0.00081 33.0 1.8 47 39-85 343-401 (490)
220 3guy_A Short-chain dehydrogena 27.9 64 0.0022 25.5 4.3 15 185-199 194-208 (230)
221 3l6e_A Oxidoreductase, short-c 27.8 64 0.0022 25.8 4.3 18 41-58 17-34 (235)
222 4dmm_A 3-oxoacyl-[acyl-carrier 27.8 1.4E+02 0.0047 24.4 6.5 61 13-81 22-83 (269)
223 2qv7_A Diacylglycerol kinase D 27.8 30 0.001 29.8 2.5 34 116-153 81-114 (337)
224 1req_B Methylmalonyl-COA mutas 27.7 54 0.0019 31.6 4.4 49 31-81 518-566 (637)
225 2nu8_A Succinyl-COA ligase [AD 27.7 1.8E+02 0.0061 24.5 7.4 83 104-198 186-287 (288)
226 3b6i_A Flavoprotein WRBA; flav 27.6 50 0.0017 25.4 3.5 31 20-53 2-33 (198)
227 3p9y_A CG14216, LD40846P; phos 27.5 94 0.0032 25.5 5.2 37 17-60 7-44 (198)
228 3dzc_A UDP-N-acetylglucosamine 27.5 3E+02 0.01 23.8 14.1 66 108-198 300-365 (396)
229 2iw1_A Lipopolysaccharide core 27.4 1.6E+02 0.0054 24.2 6.9 68 110-198 265-335 (374)
230 1kqn_A Nmnat, nicotinamide mon 27.3 91 0.0031 26.4 5.4 36 16-51 4-39 (279)
231 3h7a_A Short chain dehydrogena 27.3 65 0.0022 26.1 4.3 30 51-81 8-37 (252)
232 1fr2_A Colicin E9 immunity pro 27.2 20 0.00068 25.6 1.0 43 158-204 34-81 (86)
233 3g1w_A Sugar ABC transporter; 27.2 2.4E+02 0.0082 22.5 11.6 37 18-56 3-39 (305)
234 3qlj_A Short chain dehydrogena 27.2 2.7E+02 0.0093 23.1 8.9 106 18-142 26-148 (322)
235 2jtq_A Phage shock protein E; 27.2 1.2E+02 0.0042 19.9 5.2 29 17-53 39-67 (85)
236 2qjg_A Putative aldolase MJ040 27.1 2.5E+02 0.0086 22.8 10.4 54 145-198 202-257 (273)
237 3fwz_A Inner membrane protein 27.1 1.3E+02 0.0043 21.9 5.6 74 50-126 7-82 (140)
238 2bfw_A GLGA glycogen synthase; 27.0 1.9E+02 0.0066 21.4 7.5 69 109-199 109-179 (200)
239 2i87_A D-alanine-D-alanine lig 27.0 34 0.0012 29.6 2.7 37 20-56 4-40 (364)
240 1u0t_A Inorganic polyphosphate 26.9 82 0.0028 26.8 5.1 30 51-82 77-106 (307)
241 3v2g_A 3-oxoacyl-[acyl-carrier 26.8 2.5E+02 0.0087 22.7 8.3 17 41-57 45-61 (271)
242 2jah_A Clavulanic acid dehydro 26.7 1.6E+02 0.0054 23.5 6.6 56 18-81 6-61 (247)
243 3rkr_A Short chain oxidoreduct 26.7 1.2E+02 0.0042 24.4 6.0 56 18-81 28-83 (262)
244 3okp_A GDP-mannose-dependent a 26.7 1.8E+02 0.0062 24.0 7.2 71 107-199 264-343 (394)
245 3dzc_A UDP-N-acetylglucosamine 26.5 3.1E+02 0.011 23.6 11.1 38 17-59 23-63 (396)
246 3tov_A Glycosyl transferase fa 26.5 2.7E+02 0.0091 23.7 8.4 101 19-151 185-286 (349)
247 3lyu_A Putative hydrogenase; t 26.5 47 0.0016 24.9 3.1 35 43-77 99-133 (142)
248 3orf_A Dihydropteridine reduct 26.5 69 0.0023 25.8 4.3 29 52-81 24-52 (251)
249 1ehi_A LMDDL2, D-alanine:D-lac 26.5 64 0.0022 28.1 4.4 37 20-56 4-41 (377)
250 3dii_A Short-chain dehydrogena 26.4 69 0.0024 25.7 4.3 28 53-81 5-32 (247)
251 3edm_A Short chain dehydrogena 26.4 2.1E+02 0.0073 22.9 7.4 55 19-81 8-63 (259)
252 2fcr_A Flavodoxin; electron tr 26.3 77 0.0026 24.1 4.4 17 39-55 105-121 (173)
253 3u5t_A 3-oxoacyl-[acyl-carrier 26.2 1.5E+02 0.0052 24.1 6.5 63 11-81 19-82 (267)
254 4h15_A Short chain alcohol deh 26.1 56 0.0019 27.2 3.8 27 53-80 14-40 (261)
255 3afo_A NADH kinase POS5; alpha 26.0 1.3E+02 0.0043 27.0 6.3 30 18-50 40-69 (388)
256 3nyw_A Putative oxidoreductase 25.9 60 0.0021 26.2 3.9 33 20-60 8-40 (250)
257 3m6i_A L-arabinitol 4-dehydrog 25.8 3E+02 0.01 23.2 10.1 83 51-136 181-273 (363)
258 3pxx_A Carveol dehydrogenase; 25.8 71 0.0024 26.0 4.3 18 40-57 23-40 (287)
259 3tsc_A Putative oxidoreductase 25.8 70 0.0024 26.1 4.3 30 20-57 12-41 (277)
260 3p19_A BFPVVD8, putative blue 25.7 67 0.0023 26.3 4.2 27 53-80 19-45 (266)
261 3f1l_A Uncharacterized oxidore 25.7 72 0.0025 25.7 4.3 32 20-59 13-44 (252)
262 3tjr_A Short chain dehydrogena 25.7 1.8E+02 0.0063 24.0 7.1 66 9-81 20-85 (301)
263 3rwb_A TPLDH, pyridoxal 4-dehy 25.6 73 0.0025 25.6 4.3 32 20-59 7-38 (247)
264 3sx2_A Putative 3-ketoacyl-(ac 25.6 72 0.0025 26.0 4.3 31 20-58 14-44 (278)
265 2i2c_A Probable inorganic poly 25.6 69 0.0023 26.8 4.3 50 115-169 35-92 (272)
266 3c48_A Predicted glycosyltrans 25.6 80 0.0027 27.0 4.8 41 15-55 16-63 (438)
267 3lyl_A 3-oxoacyl-(acyl-carrier 25.6 1.4E+02 0.0048 23.5 6.1 59 15-81 1-59 (247)
268 3ea0_A ATPase, para family; al 25.4 83 0.0028 24.7 4.6 36 17-55 2-38 (245)
269 4hp8_A 2-deoxy-D-gluconate 3-d 25.3 56 0.0019 27.3 3.6 29 52-81 11-39 (247)
270 2l8b_A Protein TRAI, DNA helic 25.3 33 0.0011 28.0 2.1 130 21-154 24-158 (189)
271 3o26_A Salutaridine reductase; 25.2 60 0.0021 26.5 3.8 20 40-59 25-44 (311)
272 2eih_A Alcohol dehydrogenase; 25.1 1.9E+02 0.0065 24.3 7.1 32 51-83 168-199 (343)
273 1zem_A Xylitol dehydrogenase; 25.0 2E+02 0.007 23.0 7.1 32 20-59 8-39 (262)
274 3uug_A Multiple sugar-binding 24.9 2.8E+02 0.0094 22.5 11.7 37 18-56 2-38 (330)
275 2rd5_A Acetylglutamate kinase- 24.8 21 0.00073 30.4 0.9 40 20-60 37-79 (298)
276 3bfj_A 1,3-propanediol oxidore 24.7 1E+02 0.0036 26.9 5.5 14 113-126 90-103 (387)
277 3tqt_A D-alanine--D-alanine li 24.7 49 0.0017 29.1 3.3 36 20-55 5-40 (372)
278 1tq1_A AT5G66040, senescence-a 24.6 65 0.0022 23.4 3.5 29 17-53 80-108 (129)
279 3d3k_A Enhancer of mRNA-decapp 24.6 37 0.0013 28.6 2.4 31 20-55 86-116 (259)
280 4eso_A Putative oxidoreductase 24.5 78 0.0027 25.6 4.3 32 20-59 9-40 (255)
281 3t7c_A Carveol dehydrogenase; 24.3 76 0.0026 26.4 4.3 17 41-57 42-58 (299)
282 3uve_A Carveol dehydrogenase ( 24.3 78 0.0027 25.9 4.3 18 40-57 24-41 (286)
283 1kol_A Formaldehyde dehydrogen 24.3 3.4E+02 0.012 23.3 8.8 31 166-196 349-381 (398)
284 4iin_A 3-ketoacyl-acyl carrier 24.3 1.4E+02 0.0047 24.2 5.9 61 13-81 23-84 (271)
285 1tvm_A PTS system, galactitol- 24.3 1.3E+02 0.0043 21.8 5.0 35 17-54 19-53 (113)
286 3v2g_A 3-oxoacyl-[acyl-carrier 24.2 78 0.0027 26.0 4.3 30 51-81 32-61 (271)
287 3ew7_A LMO0794 protein; Q8Y8U8 24.2 91 0.0031 23.8 4.5 11 114-124 60-70 (221)
288 3uf0_A Short-chain dehydrogena 24.2 78 0.0027 26.0 4.3 31 51-82 32-62 (273)
289 4imr_A 3-oxoacyl-(acyl-carrier 24.2 60 0.0021 26.8 3.6 30 51-81 34-63 (275)
290 2fwm_X 2,3-dihydro-2,3-dihydro 24.2 81 0.0028 25.3 4.3 28 53-81 10-37 (250)
291 1gxg_A Colicin E8 immunity pro 24.2 16 0.00055 26.1 -0.0 44 157-204 32-80 (85)
292 1iy8_A Levodione reductase; ox 24.1 80 0.0027 25.6 4.3 32 20-59 14-45 (267)
293 3k3p_A D-alanine--D-alanine li 24.1 49 0.0017 29.3 3.2 37 20-56 38-74 (383)
294 4e6p_A Probable sorbitol dehyd 24.1 80 0.0027 25.5 4.3 31 20-58 9-39 (259)
295 2jjx_A Uridylate kinase, UMP k 24.1 1.3E+02 0.0046 24.6 5.8 41 20-61 13-63 (255)
296 3zv4_A CIS-2,3-dihydrobiphenyl 24.0 79 0.0027 26.0 4.3 31 20-58 6-36 (281)
297 3ioy_A Short-chain dehydrogena 23.9 2.2E+02 0.0074 23.9 7.2 34 19-60 8-41 (319)
298 3foj_A Uncharacterized protein 23.9 1.3E+02 0.0046 20.4 5.0 30 18-55 55-84 (100)
299 2ew8_A (S)-1-phenylethanol deh 23.9 82 0.0028 25.2 4.3 32 20-59 8-39 (249)
300 2ae2_A Protein (tropinone redu 23.8 2.1E+02 0.0072 22.8 6.9 33 19-59 9-41 (260)
301 3ppi_A 3-hydroxyacyl-COA dehyd 23.7 81 0.0028 25.7 4.3 32 20-59 31-62 (281)
302 1fjh_A 3alpha-hydroxysteroid d 23.7 84 0.0029 25.0 4.3 15 41-55 15-29 (257)
303 2bon_A Lipid kinase; DAG kinas 23.7 41 0.0014 29.0 2.5 37 114-153 81-118 (332)
304 3gem_A Short chain dehydrogena 23.7 74 0.0025 26.0 4.1 30 51-81 28-57 (260)
305 3s40_A Diacylglycerol kinase; 23.7 45 0.0015 28.3 2.8 34 116-153 64-97 (304)
306 4da9_A Short-chain dehydrogena 23.7 81 0.0028 26.0 4.3 54 20-81 30-84 (280)
307 3op4_A 3-oxoacyl-[acyl-carrier 23.6 68 0.0023 25.8 3.8 20 40-59 22-41 (248)
308 3sju_A Keto reductase; short-c 23.5 82 0.0028 25.9 4.3 32 49-81 23-54 (279)
309 2yv2_A Succinyl-COA synthetase 23.5 2.9E+02 0.01 23.3 8.0 89 104-198 193-295 (297)
310 1qxn_A SUD, sulfide dehydrogen 23.4 48 0.0016 24.6 2.6 29 17-53 80-108 (137)
311 3end_A Light-independent proto 23.4 1.1E+02 0.0036 25.4 5.0 36 16-55 38-73 (307)
312 3v2h_A D-beta-hydroxybutyrate 23.4 83 0.0028 25.9 4.3 19 40-58 38-56 (281)
313 4fgs_A Probable dehydrogenase 23.4 1.5E+02 0.005 24.9 6.0 30 51-81 30-59 (273)
314 2csu_A 457AA long hypothetical 23.3 3.1E+02 0.011 24.6 8.6 130 50-197 294-444 (457)
315 3tl3_A Short-chain type dehydr 23.3 74 0.0025 25.6 4.0 15 42-56 24-38 (257)
316 2ph1_A Nucleotide-binding prot 23.3 1.4E+02 0.0048 24.1 5.7 40 14-56 13-52 (262)
317 4fs3_A Enoyl-[acyl-carrier-pro 23.3 2.6E+02 0.009 22.4 7.5 57 18-81 5-63 (256)
318 3k4o_A Isopentenyl phosphate k 23.3 69 0.0024 26.9 3.9 42 19-60 7-63 (266)
319 4g81_D Putative hexonate dehyd 23.2 54 0.0019 27.4 3.1 30 51-81 10-39 (255)
320 3lf2_A Short chain oxidoreduct 23.2 85 0.0029 25.5 4.3 34 19-60 8-41 (265)
321 1bvy_F Protein (cytochrome P45 23.1 40 0.0014 26.9 2.2 37 15-54 17-53 (191)
322 3h2s_A Putative NADH-flavin re 23.1 87 0.003 24.1 4.2 14 112-125 59-72 (224)
323 1hdc_A 3-alpha, 20 beta-hydrox 22.9 87 0.003 25.2 4.3 31 20-58 6-36 (254)
324 2xij_A Methylmalonyl-COA mutas 22.9 4.1E+02 0.014 26.0 9.7 41 40-81 621-661 (762)
325 1qor_A Quinone oxidoreductase; 22.9 2.1E+02 0.0071 23.8 6.9 32 51-83 142-173 (327)
326 3pgx_A Carveol dehydrogenase; 22.9 86 0.0029 25.6 4.3 30 20-57 16-45 (280)
327 3v8b_A Putative dehydrogenase, 22.8 86 0.0029 25.9 4.3 30 51-81 29-58 (283)
328 3bbo_Q Ribosomal protein L18; 22.8 35 0.0012 27.2 1.7 39 38-76 113-159 (161)
329 3mwd_B ATP-citrate synthase; A 22.8 1.5E+02 0.0052 25.9 6.1 46 104-153 210-259 (334)
330 3f9i_A 3-oxoacyl-[acyl-carrier 22.8 68 0.0023 25.5 3.6 35 17-59 12-46 (249)
331 1v7z_A Creatininase, creatinin 22.7 54 0.0018 27.5 3.0 43 32-74 91-138 (260)
332 3ucx_A Short chain dehydrogena 22.7 1E+02 0.0034 25.0 4.7 30 51-81 12-41 (264)
333 3edm_A Short chain dehydrogena 22.7 89 0.003 25.3 4.3 30 51-81 9-38 (259)
334 1uls_A Putative 3-oxoacyl-acyl 22.7 90 0.0031 25.0 4.3 31 20-58 6-36 (245)
335 2ekp_A 2-deoxy-D-gluconate 3-d 22.7 91 0.0031 24.7 4.3 31 20-58 3-33 (239)
336 1dhr_A Dihydropteridine reduct 22.6 86 0.0029 24.9 4.2 29 52-81 9-37 (241)
337 3vtz_A Glucose 1-dehydrogenase 22.6 71 0.0024 26.2 3.8 29 52-81 16-44 (269)
338 3oig_A Enoyl-[acyl-carrier-pro 22.6 2.9E+02 0.01 21.9 7.7 34 19-59 7-41 (266)
339 2o2s_A Enoyl-acyl carrier redu 22.5 94 0.0032 26.0 4.6 32 20-58 10-42 (315)
340 3ab4_A Aspartokinase; aspartat 22.5 1.5E+02 0.0051 26.4 6.2 37 22-59 5-43 (421)
341 1vq8_N 50S ribosomal protein L 22.5 1.4E+02 0.0049 24.1 5.4 41 37-77 79-129 (187)
342 3e03_A Short chain dehydrogena 22.5 89 0.003 25.5 4.3 19 40-58 19-37 (274)
343 2dtx_A Glucose 1-dehydrogenase 22.4 90 0.0031 25.4 4.3 14 42-55 23-36 (264)
344 3klb_A Putative flavoprotein; 22.4 1.6E+02 0.0055 22.2 5.6 78 114-196 77-159 (162)
345 4fc7_A Peroxisomal 2,4-dienoyl 22.4 84 0.0029 25.7 4.2 32 20-59 28-59 (277)
346 4dqx_A Probable oxidoreductase 22.4 89 0.003 25.7 4.3 19 40-58 40-58 (277)
347 3rft_A Uronate dehydrogenase; 22.4 2.7E+02 0.0094 22.2 7.4 75 53-133 6-84 (267)
348 3oc9_A UDP-N-acetylglucosamine 22.4 1.1E+02 0.0038 27.7 5.2 80 106-196 24-114 (405)
349 3s55_A Putative short-chain de 22.4 90 0.0031 25.5 4.3 31 20-58 11-41 (281)
350 2zat_A Dehydrogenase/reductase 22.4 2.3E+02 0.0078 22.5 6.8 32 20-59 15-46 (260)
351 3j21_O 50S ribosomal protein L 22.4 82 0.0028 25.9 3.9 41 37-77 80-130 (203)
352 3tzq_B Short-chain type dehydr 22.3 89 0.0031 25.5 4.3 19 40-58 24-42 (271)
353 3ijr_A Oxidoreductase, short c 22.3 88 0.003 25.9 4.3 28 52-80 49-76 (291)
354 3lwb_A D-alanine--D-alanine li 22.3 61 0.0021 28.4 3.4 38 18-55 9-46 (373)
355 3tfo_A Putative 3-oxoacyl-(acy 22.2 73 0.0025 26.2 3.8 30 51-81 5-34 (264)
356 3ezl_A Acetoacetyl-COA reducta 22.2 1.1E+02 0.0038 24.3 4.8 61 13-81 7-68 (256)
357 3svt_A Short-chain type dehydr 22.2 91 0.0031 25.5 4.3 33 19-59 11-43 (281)
358 1ag9_A Flavodoxin; electron tr 22.2 1.1E+02 0.0037 23.3 4.6 19 63-81 100-118 (175)
359 1piw_A Hypothetical zinc-type 22.2 36 0.0012 29.3 1.8 137 51-196 181-342 (360)
360 2kw0_A CCMH protein; oxidoredu 22.1 1.4E+02 0.0048 21.3 4.7 43 156-220 41-83 (90)
361 3l49_A ABC sugar (ribose) tran 22.1 1.9E+02 0.0066 22.9 6.3 40 16-57 2-41 (291)
362 3ai3_A NADPH-sorbose reductase 22.1 93 0.0032 25.0 4.3 32 20-59 8-39 (263)
363 2pvp_A D-alanine-D-alanine lig 22.0 73 0.0025 27.8 3.9 39 16-56 17-55 (367)
364 1req_A Methylmalonyl-COA mutas 22.0 3.4E+02 0.012 26.5 8.9 41 40-81 613-653 (727)
365 1yt5_A Inorganic polyphosphate 22.0 69 0.0024 26.5 3.6 32 115-153 41-72 (258)
366 3i1j_A Oxidoreductase, short c 22.0 77 0.0026 25.1 3.8 20 40-59 27-46 (247)
367 3a28_C L-2.3-butanediol dehydr 22.0 85 0.0029 25.2 4.1 19 40-58 15-33 (258)
368 2b4q_A Rhamnolipids biosynthes 21.9 92 0.0032 25.5 4.3 32 20-59 30-61 (276)
369 3ak4_A NADH-dependent quinucli 21.9 94 0.0032 25.0 4.3 32 20-59 13-44 (263)
370 1o5i_A 3-oxoacyl-(acyl carrier 21.9 94 0.0032 25.0 4.3 33 19-59 19-51 (249)
371 3un1_A Probable oxidoreductase 21.9 3.1E+02 0.011 22.0 9.8 31 50-81 28-58 (260)
372 1h2b_A Alcohol dehydrogenase; 21.9 92 0.0031 26.7 4.5 32 51-84 188-220 (359)
373 2ae2_A Protein (tropinone redu 21.9 95 0.0032 25.0 4.3 30 51-81 10-39 (260)
374 2gdz_A NAD+-dependent 15-hydro 21.8 95 0.0032 25.0 4.3 31 20-58 8-38 (267)
375 3ruf_A WBGU; rossmann fold, UD 21.8 78 0.0027 26.4 3.9 31 18-56 24-54 (351)
376 3asu_A Short-chain dehydrogena 21.7 76 0.0026 25.6 3.7 19 41-59 14-32 (248)
377 3d7n_A Flavodoxin, WRBA-like p 21.7 29 0.001 27.2 1.1 33 18-53 5-37 (193)
378 3d3j_A Enhancer of mRNA-decapp 21.6 46 0.0016 28.9 2.4 31 20-55 133-163 (306)
379 3fkq_A NTRC-like two-domain pr 21.6 1.1E+02 0.0038 26.4 5.0 38 16-56 140-177 (373)
380 2pd6_A Estradiol 17-beta-dehyd 21.6 97 0.0033 24.6 4.3 31 20-58 8-38 (264)
381 2fzw_A Alcohol dehydrogenase c 21.6 3.7E+02 0.013 22.7 9.6 83 51-136 192-281 (373)
382 3ksu_A 3-oxoacyl-acyl carrier 21.6 79 0.0027 25.7 3.8 30 51-81 12-41 (262)
383 1vl8_A Gluconate 5-dehydrogena 21.5 96 0.0033 25.3 4.3 19 40-58 34-52 (267)
384 3r1i_A Short-chain type dehydr 21.5 95 0.0033 25.5 4.3 30 51-81 33-62 (276)
385 3ek2_A Enoyl-(acyl-carrier-pro 21.5 2E+02 0.0068 22.8 6.3 60 13-81 8-69 (271)
386 1yde_A Retinal dehydrogenase/r 21.4 96 0.0033 25.3 4.3 33 19-59 9-41 (270)
387 4gek_A TRNA (CMO5U34)-methyltr 21.4 1E+02 0.0035 25.4 4.5 32 49-81 69-102 (261)
388 2d1y_A Hypothetical protein TT 21.4 98 0.0034 24.9 4.3 31 20-58 7-37 (256)
389 2wsb_A Galactitol dehydrogenas 21.4 1E+02 0.0034 24.4 4.3 33 19-59 11-43 (254)
390 3rd5_A Mypaa.01249.C; ssgcid, 21.4 96 0.0033 25.5 4.3 34 18-59 15-48 (291)
391 1zmo_A Halohydrin dehalogenase 21.3 72 0.0025 25.5 3.4 30 20-57 2-31 (244)
392 2fz5_A Flavodoxin; alpha/beta 21.3 72 0.0025 22.7 3.2 30 22-54 2-31 (137)
393 1cdo_A Alcohol dehydrogenase; 21.3 3.8E+02 0.013 22.7 10.9 83 51-136 194-283 (374)
394 3gv0_A Transcriptional regulat 21.2 1.5E+02 0.005 23.8 5.4 43 16-58 5-47 (288)
395 3k9g_A PF-32 protein; ssgcid, 21.2 95 0.0033 25.0 4.2 37 15-55 23-59 (267)
396 2ag5_A DHRS6, dehydrogenase/re 21.2 81 0.0028 25.1 3.8 17 41-57 20-36 (246)
397 2qq5_A DHRS1, dehydrogenase/re 21.2 2.1E+02 0.0072 22.8 6.4 19 40-58 18-36 (260)
398 3gvc_A Oxidoreductase, probabl 21.2 84 0.0029 25.9 3.9 18 41-58 43-60 (277)
399 2z1n_A Dehydrogenase; reductas 21.1 1E+02 0.0034 24.8 4.3 32 20-59 8-39 (260)
400 2dph_A Formaldehyde dismutase; 21.1 1.7E+02 0.006 25.3 6.2 33 164-196 346-381 (398)
401 3qiv_A Short-chain dehydrogena 21.1 1E+02 0.0035 24.5 4.3 30 51-81 10-39 (253)
402 3imf_A Short chain dehydrogena 21.0 1.1E+02 0.0039 24.5 4.7 20 40-59 19-38 (257)
403 2wsb_A Galactitol dehydrogenas 21.0 69 0.0023 25.4 3.3 30 51-81 12-41 (254)
404 3n74_A 3-ketoacyl-(acyl-carrie 21.0 1E+02 0.0035 24.6 4.3 32 20-59 10-41 (261)
405 2a4k_A 3-oxoacyl-[acyl carrier 21.0 1E+02 0.0034 25.1 4.3 31 20-58 7-37 (263)
406 2qq5_A DHRS1, dehydrogenase/re 21.0 82 0.0028 25.4 3.8 30 51-81 6-35 (260)
407 3oy2_A Glycosyltransferase B73 21.0 3.6E+02 0.012 22.5 8.1 77 107-200 265-355 (413)
408 1ydg_A Trp repressor binding p 20.9 1.5E+02 0.005 23.0 5.2 34 18-54 5-38 (211)
409 1mxh_A Pteridine reductase 2; 20.9 77 0.0026 25.7 3.6 20 40-59 24-43 (276)
410 3l76_A Aspartokinase; alloster 20.9 71 0.0024 30.2 3.8 37 21-58 3-42 (600)
411 3l77_A Short-chain alcohol deh 20.9 1E+02 0.0036 24.1 4.3 29 52-81 4-32 (235)
412 3r3s_A Oxidoreductase; structu 20.9 3.5E+02 0.012 22.1 9.7 106 18-142 48-163 (294)
413 1s5p_A NAD-dependent deacetyla 20.8 3E+02 0.01 22.4 7.3 71 106-197 158-229 (235)
414 3is3_A 17BETA-hydroxysteroid d 20.8 2.9E+02 0.01 22.1 7.3 42 40-81 31-73 (270)
415 2iuy_A Avigt4, glycosyltransfe 20.8 1.6E+02 0.0055 24.1 5.7 36 20-55 4-51 (342)
416 1geg_A Acetoin reductase; SDR 20.8 2.8E+02 0.0096 22.0 7.1 32 20-59 3-34 (256)
417 3ftp_A 3-oxoacyl-[acyl-carrier 20.8 77 0.0026 26.0 3.6 42 40-81 41-82 (270)
418 3ioy_A Short-chain dehydrogena 20.7 1.1E+02 0.0037 25.8 4.7 30 51-81 9-38 (319)
419 2ash_A Queuine tRNA-ribosyltra 20.7 2.2E+02 0.0077 25.4 6.8 52 172-223 243-313 (381)
420 2rhc_B Actinorhodin polyketide 20.6 1E+02 0.0035 25.2 4.3 54 20-81 23-76 (277)
421 3eme_A Rhodanese-like domain p 20.6 1.3E+02 0.0043 20.6 4.3 32 17-56 54-85 (103)
422 1ooe_A Dihydropteridine reduct 20.6 88 0.003 24.7 3.8 29 52-81 5-33 (236)
423 3oig_A Enoyl-[acyl-carrier-pro 20.6 1.2E+02 0.0041 24.3 4.7 31 51-81 8-39 (266)
424 3o26_A Salutaridine reductase; 20.6 1.6E+02 0.0055 23.8 5.6 31 50-81 12-42 (311)
425 1geg_A Acetoin reductase; SDR 20.6 1E+02 0.0036 24.6 4.3 29 52-81 4-32 (256)
426 5nul_A Flavodoxin; electron tr 20.5 41 0.0014 24.4 1.6 30 143-172 77-108 (138)
427 3of5_A Dethiobiotin synthetase 20.4 1.5E+02 0.005 24.0 5.2 37 17-56 2-38 (228)
428 3is3_A 17BETA-hydroxysteroid d 20.4 85 0.0029 25.5 3.8 30 51-81 19-48 (270)
429 2bgk_A Rhizome secoisolaricire 20.3 1.1E+02 0.0036 24.6 4.3 32 19-58 16-47 (278)
430 3m1a_A Putative dehydrogenase; 20.3 81 0.0028 25.6 3.6 18 41-58 19-36 (281)
431 1nff_A Putative oxidoreductase 20.3 1.1E+02 0.0036 24.8 4.3 32 20-59 8-39 (260)
432 1yb1_A 17-beta-hydroxysteroid 20.3 2.3E+02 0.008 22.7 6.5 56 18-81 30-85 (272)
433 1zem_A Xylitol dehydrogenase; 20.3 1.1E+02 0.0036 24.7 4.3 30 51-81 8-37 (262)
434 3e48_A Putative nucleoside-dip 20.3 3.3E+02 0.011 21.7 7.8 26 146-171 133-158 (289)
435 1kam_A Deamido-NAD(+), nicotin 20.3 93 0.0032 24.3 3.9 29 17-45 4-32 (194)
436 3d1p_A Putative thiosulfate su 20.3 76 0.0026 23.1 3.1 29 17-53 89-117 (139)
437 3hr4_A Nitric oxide synthase, 20.3 1.3E+02 0.0044 24.7 4.8 30 19-52 40-69 (219)
438 1jzt_A Hypothetical 27.5 kDa p 20.3 43 0.0015 28.0 1.9 54 20-78 59-116 (246)
439 1ae1_A Tropinone reductase-I; 20.2 1.1E+02 0.0036 25.0 4.3 30 51-81 22-51 (273)
440 2zki_A 199AA long hypothetical 20.2 1.1E+02 0.0039 23.3 4.4 31 19-53 4-34 (199)
441 3kkj_A Amine oxidase, flavin-c 20.2 43 0.0015 25.2 1.8 27 53-81 5-31 (336)
442 3pk0_A Short-chain dehydrogena 20.2 82 0.0028 25.6 3.6 21 40-60 23-43 (262)
443 1g0o_A Trihydroxynaphthalene r 20.2 81 0.0028 25.8 3.6 17 41-57 43-59 (283)
444 2zat_A Dehydrogenase/reductase 20.2 87 0.003 25.1 3.8 30 51-81 15-44 (260)
445 3imf_A Short chain dehydrogena 20.1 83 0.0028 25.4 3.6 30 51-81 7-36 (257)
446 3e9n_A Putative short-chain de 20.1 88 0.003 24.9 3.7 30 20-58 6-35 (245)
447 2x4g_A Nucleoside-diphosphate- 20.0 3.3E+02 0.011 22.1 7.5 27 21-55 15-41 (342)
No 1
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=100.00 E-value=6e-58 Score=392.37 Aligned_cols=203 Identities=69% Similarity=1.176 Sum_probs=178.6
Q ss_pred hcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCC
Q 027287 13 MNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREIT 92 (225)
Q Consensus 13 ~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~ 92 (225)
+..++++++|||||||+.++++.|++.|++||++||++|++||||||+.|+|+|+++||+++||+||||+|+.+.++|..
T Consensus 3 ~~~~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~ 82 (216)
T 1ydh_A 3 DNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEIS 82 (216)
T ss_dssp --CCCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEEGGGHHHHCC
T ss_pred CCcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCCcEEEEechhcCccccc
Confidence 55678889999999999998999999999999999999999999999779999999999999999999999988888888
Q ss_pred CCCCceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCC
Q 027287 93 GETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGF 172 (225)
Q Consensus 93 ~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gf 172 (225)
++.+++++++++|++||.+|+++||+||++|||+|||+|+|++|||.|+++|+|||+|+|.+|||+++++|+++|+++||
T Consensus 83 ~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gf 162 (216)
T 1ydh_A 83 GETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGF 162 (216)
T ss_dssp SSCCSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTS
T ss_pred cCCCCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcEEEcCCHHHHHHHHHhhcCCccccccccccccccc
Q 027287 173 ISPNARHIIVSAPNAKELMNKMEEYFPQHERVASKLSWENEQF 215 (225)
Q Consensus 173 i~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~~~~w~~~~~ 215 (225)
|++++.+++++++|++|+++.|+++++...+...+++|..++.
T Consensus 163 i~~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~~ 205 (216)
T 1ydh_A 163 IKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEEL 205 (216)
T ss_dssp SCHHHHTTEEEESSHHHHHHHHHHCC-----------------
T ss_pred CChHHcCeEEEeCCHHHHHHHHHHhcccccccccccccchhhc
Confidence 9999999999999999999999999887777777899997543
No 2
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=100.00 E-value=2.9e-57 Score=387.90 Aligned_cols=208 Identities=83% Similarity=1.299 Sum_probs=169.8
Q ss_pred HhhhcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccC
Q 027287 10 EMEMNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPR 89 (225)
Q Consensus 10 ~~~~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~ 89 (225)
...-..++++++|||||||+.++++.|++.|++||+.||++|++||||||+.|+|+++++||+++||+||||+|..+.++
T Consensus 4 ~~~~~~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~GG~tiGVlP~~~~~~ 83 (215)
T 2a33_A 4 KGESMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPR 83 (215)
T ss_dssp ----CCCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEESSCC--
T ss_pred cccccccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcCCcEEEEcchHhcch
Confidence 34446778889999999999988888999999999999999999999999779999999999999999999999988777
Q ss_pred CCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHH
Q 027287 90 EITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVE 169 (225)
Q Consensus 90 e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~ 169 (225)
+..++.+++++++++|++||++|+++||+||++|||+|||+|+|++|||.|+|+|+|||+|+|.+|||+++++|++++++
T Consensus 84 e~~~~~~~~~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~ 163 (215)
T 2a33_A 84 ELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVE 163 (215)
T ss_dssp ------CCEEEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHH
T ss_pred hhccCCCCceeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHH
Confidence 77777888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccCcEEEcCCHHHHHHHHHhhcCCccccccccccccccccC
Q 027287 170 EGFISPNARHIIVSAPNAKELMNKMEEYFPQHERVASKLSWENEQFGL 217 (225)
Q Consensus 170 ~gfi~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~~~~w~~~~~~~ 217 (225)
+|||++++.+++++++|++|+++.|++++++......+++|..+|..+
T Consensus 164 ~Gfi~~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 211 (215)
T 2a33_A 164 EGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEMERIGY 211 (215)
T ss_dssp HTSSCHHHHTTEEEESSHHHHHHHHHC---------------------
T ss_pred cCCCCHHHCCeEEEeCCHHHHHHHHHHhcCccccccccccccccccCC
Confidence 999999999999999999999999999988877778899999887654
No 3
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=100.00 E-value=4.5e-56 Score=373.66 Aligned_cols=178 Identities=32% Similarity=0.554 Sum_probs=169.1
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCC
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETV 96 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~ 96 (225)
...++|||||||+ ++++.|++.|++||++||++|++||||||+.|+|+|+++||+++||+||||+|..+..++.+++.+
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~ 89 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDA 89 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTC
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCCC
Confidence 3347999999999 889999999999999999999999999998899999999999999999999999877777778888
Q ss_pred ceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 027287 97 GEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPN 176 (225)
Q Consensus 97 ~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~ 176 (225)
++++++.+|++||.+|+++|||||+||||+|||+|+|++|||.|+|+|+|||+|+|.+|||+++++|+++++++|||+++
T Consensus 90 ~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~ 169 (189)
T 3sbx_A 90 DELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRT 169 (189)
T ss_dssp SEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTTSSCHH
T ss_pred CeeEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCCHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcEEEcCCHHHHHHHHH
Q 027287 177 ARHIIVSAPNAKELMNKME 195 (225)
Q Consensus 177 ~~~~i~~~~d~ee~~~~l~ 195 (225)
+.+.+++++|++|+++.|+
T Consensus 170 ~~~~i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 170 AMERLIVVDNLDDALQACA 188 (189)
T ss_dssp HHHHEEEESSHHHHHHHHC
T ss_pred HcCeEEEeCCHHHHHHHhc
Confidence 9999999999999999874
No 4
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=100.00 E-value=2.4e-55 Score=371.90 Aligned_cols=181 Identities=40% Similarity=0.643 Sum_probs=170.5
Q ss_pred cccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCC
Q 027287 14 NNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITG 93 (225)
Q Consensus 14 ~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~ 93 (225)
.+.+.+++|||||||+ ++++.|++.|++||++||++|+.||||||+.|+|+|+++||+++||+||||+|..+..++.++
T Consensus 17 ~~~~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~ 95 (199)
T 3qua_A 17 EGQDRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTVGVIPKALVHRELAD 95 (199)
T ss_dssp ----CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBC
T ss_pred cccCCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEeCchhhhccccC
Confidence 3445668999999999 889999999999999999999999999998899999999999999999999999877778888
Q ss_pred CCCceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCC
Q 027287 94 ETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFI 173 (225)
Q Consensus 94 ~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi 173 (225)
+.+++++++.+|++||.+|+++|||||+||||+|||+|++++|||.|+|+|+|||+|+|.+|||+++++|+++|+++|||
T Consensus 96 ~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi 175 (199)
T 3qua_A 96 VDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYV 175 (199)
T ss_dssp TTSSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTTHHHHHHHHHTTTTTSS
T ss_pred CCCCeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccchHHHHHHHHHHHCCCC
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcEEEcCCHHHHHHHHH
Q 027287 174 SPNARHIIVSAPNAKELMNKME 195 (225)
Q Consensus 174 ~~~~~~~i~~~~d~ee~~~~l~ 195 (225)
++++.+.+++++|++|+++.|+
T Consensus 176 ~~~~~~~i~~~d~~~e~~~~l~ 197 (199)
T 3qua_A 176 SQRAMDSLVVVDNVEAALEACA 197 (199)
T ss_dssp CHHHHHTSEEESSHHHHHHHHS
T ss_pred CHHHCCeEEEeCCHHHHHHHHh
Confidence 9999999999999999999986
No 5
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=100.00 E-value=8e-55 Score=366.63 Aligned_cols=182 Identities=42% Similarity=0.827 Sum_probs=171.3
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCce
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGE 98 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~ 98 (225)
|++|||||||+.++++.|++.|++||++||++|++||||||+.|+|+|+++||+++||+||||+|..+.+++.+++.+++
T Consensus 1 m~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~ 80 (191)
T 1t35_A 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTE 80 (191)
T ss_dssp CCEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSE
T ss_pred CCEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHcCCeEEEEeCchhcccccccCCCCc
Confidence 46899999999888899999999999999999999999999779999999999999999999999987766767777888
Q ss_pred EeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcccc
Q 027287 99 VKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNAR 178 (225)
Q Consensus 99 ~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~ 178 (225)
.+++.+|++||++|+++||+||++|||+|||+|++++|||.|+|+|+|||+++|.+|||+++++|+++|+++|||++++.
T Consensus 81 ~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~ 160 (191)
T 1t35_A 81 LIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHL 160 (191)
T ss_dssp EEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHH
T ss_pred cccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHc
Confidence 88899999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred CcEEEcCCHHHHHHHHHhhcCC
Q 027287 179 HIIVSAPNAKELMNKMEEYFPQ 200 (225)
Q Consensus 179 ~~i~~~~d~ee~~~~l~~~~~~ 200 (225)
+.+.+++|++|+++.|+++.++
T Consensus 161 ~~~~~~~~~~e~~~~l~~~~~~ 182 (191)
T 1t35_A 161 KLIHSSSRPDELIEQMQNYSYP 182 (191)
T ss_dssp HHEEEESSHHHHHHHHHTC---
T ss_pred CeEEEeCCHHHHHHHHHHhcCC
Confidence 9999999999999999998754
No 6
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=1.6e-49 Score=340.38 Aligned_cols=179 Identities=23% Similarity=0.416 Sum_probs=161.4
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCce
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGE 98 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~ 98 (225)
+++|||||||+.++++.|++.|++||+.||++|++||||||+ |+|+|+++||+++||+||||+|.. ...+.+++.+++
T Consensus 37 ~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~-GiM~aa~~gAl~~gG~~iGV~~~~-P~~~~~~~~~t~ 114 (217)
T 1wek_A 37 VPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGP-GVMEAVNRGAYEAGGVSVGLNIEL-PHEQKPNPYQTH 114 (217)
T ss_dssp SCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCS-HHHHHHHHHHHHTTCCEEEEEECC-TTCCCCCSCCSE
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCCEEEEeeCC-cchhhccccCCc
Confidence 479999999999888899999999999999999999999995 999999999999999999996642 223444555677
Q ss_pred EeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCC-CCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccc
Q 027287 99 VKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNA 177 (225)
Q Consensus 99 ~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~-~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~ 177 (225)
.+.+.+|++||++|+++||+||++|||+|||+|++++|+|.|+|+ ++|||+++|. +||+++++|+++++++||+++++
T Consensus 115 ~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~-~~w~~l~~~l~~~~~~Gfi~~~~ 193 (217)
T 1wek_A 115 ALSLRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR-GYWEGLVRWLAFLRDQKAVGPED 193 (217)
T ss_dssp EEEESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH-HHHHHHHHHHHHHHHTTSSCTTG
T ss_pred CcccCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc-ccchhHHHHHHHHHHCCCCCHHH
Confidence 788899999999999999999999999999999999999999996 6799999998 69999999999999999999999
Q ss_pred cCcEEEcCCHHHHHHHHHhhcCC
Q 027287 178 RHIIVSAPNAKELMNKMEEYFPQ 200 (225)
Q Consensus 178 ~~~i~~~~d~ee~~~~l~~~~~~ 200 (225)
.+.+.+++|++|+++.|++++++
T Consensus 194 ~~~~~~~~~~~e~~~~l~~~~~~ 216 (217)
T 1wek_A 194 LQLFRLTDEPEEVVQALKAEAPP 216 (217)
T ss_dssp GGGSEEESCHHHHHHHHHC----
T ss_pred cCeEEEeCCHHHHHHHHHHhcCC
Confidence 99999999999999999998753
No 7
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=100.00 E-value=1.1e-49 Score=367.42 Aligned_cols=201 Identities=22% Similarity=0.337 Sum_probs=178.6
Q ss_pred ccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhc-------CCeEEEEeCCccc
Q 027287 15 NQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDG-------GRHVIGVIPKTLM 87 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~a-------GG~viGIiP~~~~ 87 (225)
...+.++|||||||+.. ++.|++.|++||++||++|++||||||+ |+|+++++||..+ ||+||||+|..+.
T Consensus 142 ~p~r~~~IvV~cGSs~~-~p~yye~A~eLGr~LA~~G~~LVtGGG~-GLMeAa~aGA~~a~a~qr~aGG~vIGIiP~~L~ 219 (462)
T 3gh1_A 142 IPGATPNLVVCWGGHSI-NEVEYQYTREVGHELGLRELNICTGCGP-GAMEGPMKGAAVGHAKQRYSEYRYLGLTEPSII 219 (462)
T ss_dssp CTTCCSCEEEEECCSSC-CHHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCTTCCEEEEECTTTT
T ss_pred CCCCCCCEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCEEEeCCcH-HHHHHHHHHHHHhccccccCCCeEEEEccchhh
Confidence 35677899999999984 8899999999999999999999999995 9999999998886 9999999998777
Q ss_pred cCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhC---CCCCcEEEEeC---CCCchHHH
Q 027287 88 PREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLG---IHDKPVGLLNV---DGYYNSLL 161 (225)
Q Consensus 88 ~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg---~~~kPiill~~---~g~w~~l~ 161 (225)
.++.+++.+++++++++|++||.+|++.|||||+||||+|||+|+|++|||.|++ .|+|||+|+|. +|||++++
T Consensus 220 ~~E~~N~~vteliiv~~m~~RK~~mv~~SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln~~~~~gYwd~Ll 299 (462)
T 3gh1_A 220 AAEPPNPIVNELVIMPDIEKRLEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSLD 299 (462)
T ss_dssp TTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHH
T ss_pred hhhccCCCCCeeEEeCCHHHHHHHHHHHCCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEcCCCcccHHHHHH
Confidence 6777777788899999999999999999999999999999999999999999887 78999999998 78999999
Q ss_pred HHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhhcCC------cccccccccccc-----ccccCCCCC
Q 027287 162 TFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEYFPQ------HERVASKLSWEN-----EQFGLNPKC 221 (225)
Q Consensus 162 ~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~~~~------~~~~~~~~~w~~-----~~~~~~~~~ 221 (225)
+|+++++.++ .....+++++|++|+++.|+++++. ....+++++|.. .|.||+||-
T Consensus 300 ~fL~~~v~eg----~~~~~~iv~DdpeEvl~~i~~~~~~v~~~r~~~~day~fnw~l~i~~~~q~pf~pth 366 (462)
T 3gh1_A 300 KFITDTLGEA----ARKHYSIAIDNPAEAARIMSNAMPLVRQHRKDKEDAYSFNWSLKIEPEFQLPFEPNH 366 (462)
T ss_dssp HHHHHHHCGG----GGGGCEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSSCCCHHHHSCCCCCH
T ss_pred HHHHHHhhhh----hhhccEEEcCCHHHHHHHHHHHHHHHHHHHhhcCCceeeeeeeccChhhcCCCCCCh
Confidence 9999998765 3345678999999999999987532 122668899995 999999984
No 8
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=5.7e-49 Score=325.67 Aligned_cols=168 Identities=24% Similarity=0.367 Sum_probs=156.0
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCC-CCCCCCc
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPRE-ITGETVG 97 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e-~~~~~~~ 97 (225)
|++|||||||+.++++.|++.|++||+.||++|++||||||+ |+|+++++||+++||+||||+|..++|.+ .+++.++
T Consensus 1 m~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~-GiM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~~ 79 (171)
T 1weh_A 1 MRLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQ-GGMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVD 79 (171)
T ss_dssp CEEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSS-THHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCS
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCcEEEEeccccCcccccccCCCc
Confidence 468999999999888899999999999999999999999997 99999999999999999999998666666 4455567
Q ss_pred eEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCC-CCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 027287 98 EVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPN 176 (225)
Q Consensus 98 ~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~-~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~ 176 (225)
+.+.+.+|++||++|+++||+||++|||+|||+|++++|+|.|+|+ ++|| +++| |||++++ +++||++++
T Consensus 80 ~~~~~~~f~~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~--g~~~~l~------~~~gfi~~~ 150 (171)
T 1weh_A 80 LELPAATLPQRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD--PYWLGLL------KAHGEIAPE 150 (171)
T ss_dssp EECCCSSHHHHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC--GGGGGTC------CCBTTBCHH
T ss_pred eeeecCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC--cchhhhH------hhcCCCChh
Confidence 7788899999999999999999999999999999999999999997 6899 9998 8999987 788999999
Q ss_pred ccCcEEEcCCHHHHHHHHHh
Q 027287 177 ARHIIVSAPNAKELMNKMEE 196 (225)
Q Consensus 177 ~~~~i~~~~d~ee~~~~l~~ 196 (225)
+.+.+++++|++|+++.|++
T Consensus 151 ~~~~~~~~~~~~e~~~~l~~ 170 (171)
T 1weh_A 151 DVGLLRVVADEEDLRRFLRS 170 (171)
T ss_dssp HHTTSEECCSHHHHHHHHHT
T ss_pred hcCeEEEeCCHHHHHHHHHh
Confidence 99999999999999999975
No 9
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=100.00 E-value=2.5e-47 Score=353.72 Aligned_cols=199 Identities=19% Similarity=0.265 Sum_probs=171.8
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhc-------CCeEEEEeCCcccc
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDG-------GRHVIGVIPKTLMP 88 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~a-------GG~viGIiP~~~~~ 88 (225)
..++++|||||||+.++ +.+|+.|++||++||++|++||||||+ |+|+++++||..+ ||+||||+|..+..
T Consensus 141 p~~~~~ivVv~GSs~~~-~~~Ye~A~eLGr~LA~~G~~LVtGGG~-GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~ 218 (460)
T 3bq9_A 141 PQEEPNMVVCWGGHSIN-EIEYKYTKDVGYHIGLRGLNICTGCGP-GAMKGPMKGATIGHAKQRVEGGRYLGLTEPGIIA 218 (460)
T ss_dssp TTCCSCEEEEECCSSCC-HHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCSSCCEEEEECTTTTT
T ss_pred CCCCCCEEEEEcCCCCC-CHHHHHHHHHHHHHHHCCCEEEeCCcH-HHhhHHHhhHHhhcccccCCCCEEEEEeChhhhh
Confidence 34666788888888764 556699999999999999999999997 9998888888765 99999999998877
Q ss_pred CCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCC---CCCcEEEEe---CCCCchHHHH
Q 027287 89 REITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGI---HDKPVGLLN---VDGYYNSLLT 162 (225)
Q Consensus 89 ~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~---~~kPiill~---~~g~w~~l~~ 162 (225)
++.+++.+++++++++|++||.+|++.|||||+||||+|||+|+|++|||.|+|. ++|||+|+| .+|||+++++
T Consensus 219 ~E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~ 298 (460)
T 3bq9_A 219 AEPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDE 298 (460)
T ss_dssp TSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHH
T ss_pred hhhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHH
Confidence 7888888888999999999999999999999999999999999999999999875 899999997 4789999999
Q ss_pred HHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhh-------cCCcccccccccccc-----ccccCCCCC
Q 027287 163 FIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEY-------FPQHERVASKLSWEN-----EQFGLNPKC 221 (225)
Q Consensus 163 ~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~-------~~~~~~~~~~~~w~~-----~~~~~~~~~ 221 (225)
|+++++.+ ++....+++++||+|+++.|+++ +. .-..+++++|.. .|.||+||-
T Consensus 299 ~l~~~l~~----~~~~~~iiv~ddpeEal~~l~~~~~~v~~~y~-~~~~ry~~nW~l~i~~~~q~pf~p~h 364 (460)
T 3bq9_A 299 FIGATIGD----EARQLYKIIIDDPAAVAQHMHAGMAAVKQYRR-DSGDAYYFNWTLKINEEFQRPFSPTH 364 (460)
T ss_dssp HHHHHTCT----TGGGGCEEEESCHHHHHHHHHHHHHHHHHHHH-HTTCCSSSCCSCCCCGGGTSCCCCCH
T ss_pred HHHHHhcc----hhhcCcEEEeCCHHHHHHHHHHHHHHHHHHhc-ccCceeeeccccccChhhcCCCCCcc
Confidence 99988765 34455678999999999998763 22 123777899995 899999984
No 10
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=100.00 E-value=2.3e-44 Score=303.84 Aligned_cols=168 Identities=25% Similarity=0.398 Sum_probs=147.0
Q ss_pred ccCCcceEEEEeCCCCCCCh----HHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCC
Q 027287 15 NQSKFNRICVFCGSSAGKKS----TYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPRE 90 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~----~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e 90 (225)
++.++++|||||||+. +++ .|++.|++||+.||++|++|||||++ |+|+|+++||+++||.||||+|...
T Consensus 19 ~~~~m~~IaV~Gss~~-~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~-GiM~aa~~gAl~~GG~~iGVlP~e~---- 92 (195)
T 1rcu_A 19 FQGHMKKVVVVGYSGP-VNKSPVSELRDICLELGRTLAKKGYLVFNGGRD-GVMELVSQGVREAGGTVVGILPDEE---- 92 (195)
T ss_dssp ----CCEEEEEECCSC-TTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSS-HHHHHHHHHHHHTTCCEEEEESTTC----
T ss_pred ccCCCCeEEEEecCCC-CCccccHHHHHHHHHHHHHHHHCCCEEEeCCHH-HHHHHHHHHHHHcCCcEEEEeCCcc----
Confidence 4556789999999876 445 89999999999999999999999885 9999999999999999999999732
Q ss_pred CCCCCCceEeec--CCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHH
Q 027287 91 ITGETVGEVKPV--ADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAV 168 (225)
Q Consensus 91 ~~~~~~~~~~~~--~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~ 168 (225)
..+++.++.+. .+|++||++|+++||+||++|||+|||+|++++|+ ++|||+++|.+|||+++ +++++
T Consensus 93 -~~~~~~~~~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~------~~kPV~lln~~g~w~~~---l~~~~ 162 (195)
T 1rcu_A 93 -AGNPYLSVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYA------LGKPVILLRGTGGWTDR---ISQVL 162 (195)
T ss_dssp -CCCTTCSEEEECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH------TTCCEEEETTSCHHHHH---GGGGC
T ss_pred -cCCCCcceeeecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHh------cCCCEEEECCCCccHHH---HHHHH
Confidence 23455666665 68999999999999999999999999999999996 68999999999999987 46788
Q ss_pred HcC-CCCccccCcEEEcCCHHHHHHHHHhhc
Q 027287 169 EEG-FISPNARHIIVSAPNAKELMNKMEEYF 198 (225)
Q Consensus 169 ~~g-fi~~~~~~~i~~~~d~ee~~~~l~~~~ 198 (225)
++| ||++++.+.+.+++|++|+++.|++++
T Consensus 163 ~~G~fi~~~~~~~i~~~~~~ee~~~~l~~~~ 193 (195)
T 1rcu_A 163 IDGKYLDNRRIVEIHQAWTVEEAVQIIEQIL 193 (195)
T ss_dssp BTTTBSSTTCCSCEEEESSHHHHHHHHHTC-
T ss_pred HcCCcCCHHHcCeEEEeCCHHHHHHHHHHHh
Confidence 888 999999999999999999999998865
No 11
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=100.00 E-value=3.2e-41 Score=280.52 Aligned_cols=164 Identities=22% Similarity=0.240 Sum_probs=143.7
Q ss_pred ccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCC
Q 027287 15 NQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGE 94 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~ 94 (225)
+++..++||||||++.+.++.|++.|++||+.||++|++||||||+.|+|++++++|+++||.||||+|.. .++.+++
T Consensus 9 ~~~~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~gG~tigVlP~~--~~~~~~~ 86 (176)
T 2iz6_A 9 MSGRKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGP--DTSEISD 86 (176)
T ss_dssp --CCCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHTTCCEEEEECC-------CCT
T ss_pred ccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHcCCEEEEEeCch--hhhhhcc
Confidence 45666899999888767789999999999999999999999999945999999999999999999999976 3455666
Q ss_pred CCceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCC
Q 027287 95 TVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFIS 174 (225)
Q Consensus 95 ~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~ 174 (225)
.+++.+++.+|++||++|+++||+||++|||+|||+|++++|. ++|||+++|. |+ +++||++
T Consensus 87 ~~~~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~------~~kpV~~l~~---~~---------~~~gfi~ 148 (176)
T 2iz6_A 87 AVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALK------AKKPVVLLGT---QP---------EAEKFFT 148 (176)
T ss_dssp TCSEEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHH------TTCCEEEESC---CH---------HHHHHHH
T ss_pred CCceeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHH------hCCcEEEEcC---cc---------cccccCC
Confidence 7788888999999999999999999999999999999999992 6899999985 66 4557888
Q ss_pred ccccCcEEEcCCHHHHHHHHHhhc
Q 027287 175 PNARHIIVSAPNAKELMNKMEEYF 198 (225)
Q Consensus 175 ~~~~~~i~~~~d~ee~~~~l~~~~ 198 (225)
++..+.+.+++|++|+++.|++++
T Consensus 149 ~~~~~~i~~~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 149 SLDAGLVHVAADVAGAIAAVKQLL 172 (176)
T ss_dssp HHCTTTEEEESSHHHHHHHHHHHH
T ss_pred hhhcCeEEEcCCHHHHHHHHHHHH
Confidence 899999999999999999999875
No 12
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=99.43 E-value=3.8e-12 Score=116.62 Aligned_cols=157 Identities=15% Similarity=0.163 Sum_probs=117.7
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCcc---ccCCC----
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTL---MPREI---- 91 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~---~~~e~---- 91 (225)
.+.|+|+ |||.. .+.-.+.|++|++.|+++|++||+|+.. |++.+++++|+++| +|+|++.-+ +|.+.
T Consensus 127 ~~~vAIV-GsR~~-s~yG~~~a~~l~~~La~~g~~VVSGlA~-GID~~AH~~AL~~g--TIaVLg~Gld~~YP~~n~~L~ 201 (382)
T 3maj_A 127 RPMIAIV-GSRNA-SGAGLKFAGQLAADLGAAGFVVISGLAR-GIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLL 201 (382)
T ss_dssp SCEEEEE-CCSSC-CHHHHHHHHHHHHHHHHHTCEEEECCCT-THHHHHHHHHTTTC--EEEECSSCTTSCSSGGGHHHH
T ss_pred CceEEEE-eCCCC-CHHHHHHHHHHHHHHHHCCcEEEeCCcc-CHHHHHHHHHHhCC--eEEEECCCcCccCCHhhHHHH
Confidence 4689999 57765 4555789999999999999999999996 99999999999987 999998643 33321
Q ss_pred ----CCCCC-------ceEeecCCHHHHHHHHHhhCCEEEEecCC--cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCch
Q 027287 92 ----TGETV-------GEVKPVADMHQRKAEMAKHSDAFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 92 ----~~~~~-------~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG--~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~ 158 (225)
..+.. ..-.....|..||+++...||++||+-.+ .|||...-.++. .+|||+.+-+ ...+
T Consensus 202 ~~I~~~~G~liSE~ppg~~p~~~~Fp~RNRiIagLS~~vvVvEA~~kSGsliTA~~Ale------~gR~VfavPG-~i~~ 274 (382)
T 3maj_A 202 LDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAAD------QGREVFAVPG-SPLD 274 (382)
T ss_dssp HHHHHTTCEEEECSCTTCCCCTTHHHHHHHHHHHHCSCEEECCCCTTCTHHHHHHHHHH------HTCCEEECCC-CTTC
T ss_pred HHHHHhCCcEEecCCCCCCCCccccHHHHHHHHHhCCceEEEecCCCCcHHHHHHHHHH------hCCcEEEEcC-CCCC
Confidence 00110 01112346789999999999999999876 899999887774 3799988743 3445
Q ss_pred HHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHh
Q 027287 159 SLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEE 196 (225)
Q Consensus 159 ~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~ 196 (225)
+.-.--..++++|. ..+.+++|+++.|..
T Consensus 275 ~~s~G~n~LI~~GA---------~lv~~~~Dil~~l~~ 303 (382)
T 3maj_A 275 PRAAGTNDLIKQGA---------TLITSASDIVEAVAS 303 (382)
T ss_dssp GGGHHHHHHHHTTC---------EECSSHHHHHHHHTT
T ss_pred cccccHHHHHHCCC---------EEECCHHHHHHHhhh
Confidence 44444456777662 468899999998854
No 13
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=99.40 E-value=7.9e-12 Score=110.63 Aligned_cols=156 Identities=17% Similarity=0.190 Sum_probs=115.1
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCcc---ccCCCC---
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTL---MPREIT--- 92 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~---~~~e~~--- 92 (225)
.+.|+|+ |||.. .+.-.+.|+++++.|+ ++++||+|+.. |+..++.++|+++||.+|+|++..+ +|.+..
T Consensus 106 ~~~vaIV-GsR~~-s~yg~~~a~~l~~~La-~~~~VVSGlA~-GID~~AH~~aL~~~g~TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVV-GSRAC-SKQGAKSVEKVIQGLE-NELVIVSGLAK-GIDTAAHMAALQNGGKTIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEE-ECTTC-CHHHHHHHHHHHHTTT-TCSEEEECCCT-THHHHHHHHHHHHTCCEEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEE-cCCCC-CHHHHHHHHHHHHHHh-hhheEecCccc-CHHHHHHHHHHhcCCCEEEEecccccccCchhhHHHH
Confidence 4689999 56765 4666789999999996 68999999996 9999999999999999999998754 232210
Q ss_pred -----------CCCCceEeecCCHHHHHHHHHhhCCEEEEecCC--cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchH
Q 027287 93 -----------GETVGEVKPVADMHQRKAEMAKHSDAFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNS 159 (225)
Q Consensus 93 -----------~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG--~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~ 159 (225)
.-+...-.....|..||+++...||++||+.-+ .|||.=.-.++. .+|||+.+-+ ...++
T Consensus 182 ~~i~~~GlliSE~ppg~~p~~~~Fp~RNRiIagLS~~~vVvEA~~~SGsliTA~~Ale------~gR~VfavPG-~i~~~ 254 (288)
T 3uqz_A 182 DYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAME------EGRDVFAIPG-SILDG 254 (288)
T ss_dssp HHHHHHSEEEESSCTTCCCCTTHHHHHHHHHHHHCSEEEEESCCTTCHHHHHHHHHHH------TTCEEEECCC-CSSSS
T ss_pred HHhcccCcEeeccCCCCCccccccHHHHHHHHHcCCeEEEEecCCCChHHHHHHHHHH------cCCeEEEECC-CCCCc
Confidence 000111223457789999999999999999875 799887766663 5799988743 24444
Q ss_pred HHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHH
Q 027287 160 LLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKM 194 (225)
Q Consensus 160 l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l 194 (225)
.-.--..++++|. ..+.+++|+++.+
T Consensus 255 ~s~G~n~LI~~GA---------~lv~~~~Dil~el 280 (288)
T 3uqz_A 255 LSDGCHHLIQEGA---------KLVTSGQDVLAEF 280 (288)
T ss_dssp TTHHHHHHHHTTC---------EECSSHHHHHHHC
T ss_pred cchHHHHHHHCCC---------EEECCHHHHHHHh
Confidence 4444455677762 4678999998876
No 14
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=97.75 E-value=0.0003 Score=56.68 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=69.1
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCC-CCCCC-ceEeecCCHHHHHHHHHhhCCEEEEec-CCc--c
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREI-TGETV-GEVKPVADMHQRKAEMAKHSDAFIALP-GGY--G 127 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~-~~~~~-~~~~~~~~m~~Rk~~mv~~sDa~Ivlp-GG~--G 127 (225)
.||+||- +|+..|+-+.|+++|-..-|..|.-....+. .+..| -......++..|....++.||+.++|- |.. |
T Consensus 10 kIiSGGQ-TGvDraALd~A~~~gi~~gGwcP~GR~aEDG~ip~~Y~L~E~~~~~y~~Rt~~NV~DSDgTLI~~~g~lsGG 88 (158)
T 3imk_A 10 KIISGGQ-TGADRAALDFAIKHHIPYGGWVPKGRLAEGGRVPETYQLQEMPTSDYSKRTEKNVLDSDGTLIISHGILKGG 88 (158)
T ss_dssp EEECCCC-TTHHHHHHHHHHHTTCCEECEECGGGCCTTSSCCTTSCCEECSSCCHHHHHHHHHHTSSEEEEEESSSCCHH
T ss_pred EEeeCCc-chHHHHHHHHHHHcCCCcceecCCCcccccCCCCccccccccCCCCHHHHHHHhhhhcCeEEEEecCCCCCc
Confidence 6899987 5999999999999999999999974332221 11222 112235678999999999999988886 654 6
Q ss_pred cHHHHHHHHHHHHhCCCCCcEEEEeCCC
Q 027287 128 TLEELLEVITWAQLGIHDKPVGLLNVDG 155 (225)
Q Consensus 128 TL~Ei~~a~~~~qlg~~~kPiill~~~g 155 (225)
|..=+..+. .|+||+.+++.+.
T Consensus 89 T~lT~~~a~------~~~KP~l~i~l~~ 110 (158)
T 3imk_A 89 SALTEFFAE------QYKKPCLHIDLDR 110 (158)
T ss_dssp HHHHHHHHH------HTTCCEEEEETTT
T ss_pred hHHHHHHHH------HhCCCEEEEeccc
Confidence 655444333 4789999998754
No 15
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=97.74 E-value=0.00077 Score=55.44 Aligned_cols=131 Identities=11% Similarity=0.024 Sum_probs=80.2
Q ss_pred CcceEEEEeCCCCCC-------ChHHHHHHHH----HHHHHHhCC-CeEEEcCCCccHHHHHHHHHHh-----cCCeEEE
Q 027287 18 KFNRICVFCGSSAGK-------KSTYKDAAIE----LGKELVARN-IDLVYGGGSVGLMGLISQAVYD-----GGRHVIG 80 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~-------~~~~~~~A~~----lG~~LA~~G-~~lv~GGg~~GlM~a~a~gA~~-----aGG~viG 80 (225)
+|++|+|.| .|.-. +|.....-.. |.+++ +.| -.+++||.. |+...+++.|++ .+.+.+-
T Consensus 1 ~m~~i~vTG-hR~~~l~if~~~~~~~~~ik~~L~~~l~~l~-~~G~~~~isgga~-G~D~~aae~vl~lk~~y~~i~L~~ 77 (181)
T 2nx2_A 1 SLKVLAITG-YKPFELGIFKQDDKALYYIKKAIKNRLIAFL-DEGLEWILISGQL-GVELWAAEAAYDLQEEYPDLKVAV 77 (181)
T ss_dssp CCCEEEEEE-CCHHHHTCCSSCCHHHHHHHHHHHHHHHHHH-TTTCCEEEECCCT-THHHHHHHHHHTTTTTCTTCEEEE
T ss_pred CceEEEEEe-CCCccccCccccchHHHHHHHHHHHHHHHHH-hCCCcEEEECCCc-cHHHHHHHHHHHhccccCCceEEE
Confidence 467889885 55432 3433322233 34434 457 477788874 999999999999 4678888
Q ss_pred EeCCccccCCCCCC----------CCceEe-e--c-----CCHHHHHHHHHhhCCEEEEec-CC--cccHHHHHHHHHHH
Q 027287 81 VIPKTLMPREITGE----------TVGEVK-P--V-----ADMHQRKAEMAKHSDAFIALP-GG--YGTLEELLEVITWA 139 (225)
Q Consensus 81 IiP~~~~~~e~~~~----------~~~~~~-~--~-----~~m~~Rk~~mv~~sDa~Ivlp-GG--~GTL~Ei~~a~~~~ 139 (225)
|+|-.......... ..+.+. + . ..+..|++.|+++||.+|++- |. -||-.=+..+....
T Consensus 78 v~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~~~~~~~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~ 157 (181)
T 2nx2_A 78 ITPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRR 157 (181)
T ss_dssp EESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCCCHHHHHHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHH
T ss_pred EecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCCCHHHHHHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhc
Confidence 89965433221100 011111 1 1 125799999999999999987 43 37766555444321
Q ss_pred HhCCCCCcEEEEeC
Q 027287 140 QLGIHDKPVGLLNV 153 (225)
Q Consensus 140 qlg~~~kPiill~~ 153 (225)
+ .+++||.+++.
T Consensus 158 ~--~~~~pv~~I~~ 169 (181)
T 2nx2_A 158 E--QDGYPIYFITM 169 (181)
T ss_dssp H--HHCCCEEEECH
T ss_pred c--ccCCeEEEEcH
Confidence 1 24799999864
No 16
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=95.41 E-value=0.045 Score=43.86 Aligned_cols=81 Identities=16% Similarity=0.223 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhCCEEEEecC--CcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEE
Q 027287 105 MHQRKAEMAKHSDAFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIV 182 (225)
Q Consensus 105 m~~Rk~~mv~~sDa~IvlpG--G~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~ 182 (225)
...|...+++.||++|++.+ ..||.-|+-.++. .+|||+++..+.- ..- +..|. +|.-..+..+.+.
T Consensus 67 i~~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~a------lgKPVi~l~~~~~-~~~---~n~M~-~g~~~~~~~~~~~ 135 (165)
T 2khz_A 67 IHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVA------LGKPILCLFRPQS-GRV---LSAMI-RGAADGSRFQVWD 135 (165)
T ss_dssp HHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHH------TCSSEEEEECTTT-TCC---CCHHH-HHTCCSSSEEEEE
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHH------CCCEEEEEEcCCC-CCc---chhhh-cccCccceeEEEe
Confidence 36888889999999999986 4799999998884 5799999865431 111 11232 2322223334444
Q ss_pred EcCCHHHHHHHHHhhc
Q 027287 183 SAPNAKELMNKMEEYF 198 (225)
Q Consensus 183 ~~~d~ee~~~~l~~~~ 198 (225)
+ |.+|+.+.|.++.
T Consensus 136 y--~~~el~~~l~~~~ 149 (165)
T 2khz_A 136 Y--AEGEVETMLDRYF 149 (165)
T ss_dssp C--CTTTHHHHHHHHH
T ss_pred c--CHHHHHHHHHHHH
Confidence 3 7888888888774
No 17
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=94.44 E-value=0.043 Score=44.11 Aligned_cols=89 Identities=21% Similarity=0.195 Sum_probs=55.5
Q ss_pred CHHHHHHHHHhhCCEEEEe--c--C---CcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHH-HcCCC--
Q 027287 104 DMHQRKAEMAKHSDAFIAL--P--G---GYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAV-EEGFI-- 173 (225)
Q Consensus 104 ~m~~Rk~~mv~~sDa~Ivl--p--G---G~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~-~~gfi-- 173 (225)
....+....++.||++|++ | | -.||.-|+-.++. .+|||+++..+ + .++.+...... .+|+.
T Consensus 56 ~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~A------lgKPVi~l~~d-~-r~~~~~~~~~~d~~g~~ve 127 (161)
T 2f62_A 56 DIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAA------LNKMVLTFTSD-R-RNMREKYGSGVDKDNLRVE 127 (161)
T ss_dssp HHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHH------TTCEEEEECSC-C-SCHHHHHTSSBCTTSCBCC
T ss_pred HHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHH------CCCEEEEEEcC-c-hhhhhhccccccccccccc
Confidence 3467888899999999999 5 4 3699999998885 57999998643 2 22221111000 01110
Q ss_pred -----Cccc-cCcEEEcCCHHHHHHHHHhhcCC
Q 027287 174 -----SPNA-RHIIVSAPNAKELMNKMEEYFPQ 200 (225)
Q Consensus 174 -----~~~~-~~~i~~~~d~ee~~~~l~~~~~~ 200 (225)
.+-. ...+.+.+|.+++++.|.+....
T Consensus 128 df~~~~NLMl~~~~~~~~~~~~~l~~l~~~~~~ 160 (161)
T 2f62_A 128 GFGLPFNLMLYDGVEVFDSFESAFKYFLANFPS 160 (161)
T ss_dssp CSSCSSCGGGCCSSCEESSHHHHHHHHHHHSCC
T ss_pred ccCCcchhhhhhhheeeCCHHHHHHHHHHhhcC
Confidence 0000 01122678999999999887543
No 18
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=94.13 E-value=1.4 Score=33.80 Aligned_cols=64 Identities=20% Similarity=0.334 Sum_probs=38.7
Q ss_pred hhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcC----CHHH
Q 027287 114 KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAP----NAKE 189 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~----d~ee 189 (225)
..||+||- .||.||+.|... +++|++++.. +.+. ....+.+.+.|. -+.++ ++++
T Consensus 85 ~~ad~~I~-~~G~~t~~Ea~~---------~G~P~i~~p~--~~~Q-~~na~~l~~~g~--------g~~~~~~~~~~~~ 143 (170)
T 2o6l_A 85 PKTRAFIT-HGGANGIYEAIY---------HGIPMVGIPL--FADQ-PDNIAHMKARGA--------AVRVDFNTMSSTD 143 (170)
T ss_dssp TTEEEEEE-CCCHHHHHHHHH---------HTCCEEECCC--STTH-HHHHHHHHTTTS--------EEECCTTTCCHHH
T ss_pred CCcCEEEE-cCCccHHHHHHH---------cCCCEEeccc--hhhH-HHHHHHHHHcCC--------eEEeccccCCHHH
Confidence 67787775 788899998752 3799999853 2333 222233433332 12222 7888
Q ss_pred HHHHHHhhc
Q 027287 190 LMNKMEEYF 198 (225)
Q Consensus 190 ~~~~l~~~~ 198 (225)
+.+.|.+..
T Consensus 144 l~~~i~~ll 152 (170)
T 2o6l_A 144 LLNALKRVI 152 (170)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777654
No 19
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=94.12 E-value=0.18 Score=40.63 Aligned_cols=85 Identities=21% Similarity=0.262 Sum_probs=54.0
Q ss_pred CHHHHHHHHHhhCCEEEEe-cCC---cccHHHHHHHHHHHHhCCCCCcEEEEeCC----CCc-hHHHHHHHHHHHc----
Q 027287 104 DMHQRKAEMAKHSDAFIAL-PGG---YGTLEELLEVITWAQLGIHDKPVGLLNVD----GYY-NSLLTFIDKAVEE---- 170 (225)
Q Consensus 104 ~m~~Rk~~mv~~sDa~Ivl-pGG---~GTL~Ei~~a~~~~qlg~~~kPiill~~~----g~w-~~l~~~l~~~~~~---- 170 (225)
..+.+....++.||++|++ .|. .||.-|+-.++. .+|||+++..+ |-- .+.+..+....+.
T Consensus 58 ~i~~~D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a------~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~ 131 (162)
T 3ehd_A 58 MIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYA------KGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHY 131 (162)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHH------TTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCC
T ss_pred HHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH------CCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhh
Confidence 3468888889999998886 554 799999998885 57999998653 111 1111111000000
Q ss_pred ------CCCCccccCcEEEcCCHHHHHHHHHhhc
Q 027287 171 ------GFISPNARHIIVSAPNAKELMNKMEEYF 198 (225)
Q Consensus 171 ------gfi~~~~~~~i~~~~d~ee~~~~l~~~~ 198 (225)
|.|. ..=.++.|.+|+++.|+.+.
T Consensus 132 ~N~~~~G~i~----~~g~~~~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 132 LNLYTVGLIK----LNGRVVSSEEDLLEEIKQRL 161 (162)
T ss_dssp CCHHHHHHHH----TTEEEESSHHHHHHHHHHTC
T ss_pred hhHHHhhhHH----hCCeEEeCHHHHHHHHHHHh
Confidence 1111 12256799999999998863
No 20
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=92.47 E-value=0.18 Score=40.23 Aligned_cols=81 Identities=16% Similarity=0.211 Sum_probs=52.3
Q ss_pred CHHHHHHHHHhhCCEEEEecC--CcccHHHHHHHHHHHHhCCCCCcEEEEeCC---CCchHHHHHHHHHHHcCCCCcccc
Q 027287 104 DMHQRKAEMAKHSDAFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLLNVD---GYYNSLLTFIDKAVEEGFISPNAR 178 (225)
Q Consensus 104 ~m~~Rk~~mv~~sDa~IvlpG--G~GTL~Ei~~a~~~~qlg~~~kPiill~~~---g~w~~l~~~l~~~~~~gfi~~~~~ 178 (225)
..+.|+..+++.||++|+..- ..||.-|+-.++. .+|||+++... ...+.++ +-. -+....
T Consensus 57 ~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~a------lgkPV~~l~~~~~~~~ls~mi---~G~-----~~~~~~ 122 (152)
T 4fyk_A 57 FIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVA------LGKPILCLFRPQSGRVLSAMI---RGA-----ADGSRF 122 (152)
T ss_dssp HHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHH------TTCCEEEEECGGGSCCCCHHH---HHH-----CCSSSE
T ss_pred HHHHHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHH------cCCeEEEEEeCCccchhHHHH---cCC-----CCCCeE
Confidence 347899999999999999864 5799999998884 57999996432 1222222 211 111222
Q ss_pred CcEEEcCCHHHHHHHHHhhcCC
Q 027287 179 HIIVSAPNAKELMNKMEEYFPQ 200 (225)
Q Consensus 179 ~~i~~~~d~ee~~~~l~~~~~~ 200 (225)
... -.++ +|+-+.|.+|...
T Consensus 123 ~~~-~Y~~-~el~~il~~f~~~ 142 (152)
T 4fyk_A 123 QVW-DYAE-GEVETMLDRYFEA 142 (152)
T ss_dssp EEE-ECCT-TCHHHHHHHHHC-
T ss_pred EEE-EecH-HHHHHHHHHHHHh
Confidence 333 3344 7888888887543
No 21
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=92.00 E-value=0.21 Score=39.81 Aligned_cols=43 Identities=21% Similarity=0.071 Sum_probs=36.7
Q ss_pred HHHHHHHHhhCCEEEEecCC----cccHHHHHHHHHHHHhCCCCCcEEEEeCC
Q 027287 106 HQRKAEMAKHSDAFIALPGG----YGTLEELLEVITWAQLGIHDKPVGLLNVD 154 (225)
Q Consensus 106 ~~Rk~~mv~~sDa~IvlpGG----~GTL~Ei~~a~~~~qlg~~~kPiill~~~ 154 (225)
..+....++.||++|++.-| .||.-|+-.++. .+|||+++..+
T Consensus 69 ~~~D~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A------~gkPVv~~~~~ 115 (157)
T 1f8y_A 69 YNNDLNGIKTNDIMLGVYIPDEEDVGLGMELGYALS------QGKYVLLVIPD 115 (157)
T ss_dssp HHHHHHHHHTSSEEEEECCGGGCCHHHHHHHHHHHH------TTCEEEEEECG
T ss_pred HHHhHHHHHhCCEEEEEcCCCCCCccHHHHHHHHHH------CCCeEEEEEcC
Confidence 68888889999999999755 799999998885 58999998654
No 22
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=91.38 E-value=5.3 Score=34.35 Aligned_cols=67 Identities=13% Similarity=0.034 Sum_probs=39.5
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc---CCHH
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA---PNAK 188 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~---~d~e 188 (225)
++..+|+||. .||.||+.|.. ..++|++++.. +.+.. ...+.+.+.|.- +.+. -+++
T Consensus 276 ~l~~~d~~v~-~~G~~t~~Ea~---------~~G~P~v~~p~--~~dq~-~~a~~~~~~g~g-------~~~~~~~~~~~ 335 (384)
T 2p6p_A 276 VAPTCDLLVH-HAGGVSTLTGL---------SAGVPQLLIPK--GSVLE-APARRVADYGAA-------IALLPGEDSTE 335 (384)
T ss_dssp HGGGCSEEEE-CSCTTHHHHHH---------HTTCCEEECCC--SHHHH-HHHHHHHHHTSE-------EECCTTCCCHH
T ss_pred HHhhCCEEEe-CCcHHHHHHHH---------HhCCCEEEccC--cccch-HHHHHHHHCCCe-------EecCcCCCCHH
Confidence 4488998885 78889987775 15899999853 22222 222334343321 1111 1677
Q ss_pred HHHHHHHhhc
Q 027287 189 ELMNKMEEYF 198 (225)
Q Consensus 189 e~~~~l~~~~ 198 (225)
++.+.|.+..
T Consensus 336 ~l~~~i~~ll 345 (384)
T 2p6p_A 336 AIADSCQELQ 345 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 23
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=90.44 E-value=3.5 Score=36.28 Aligned_cols=129 Identities=14% Similarity=0.134 Sum_probs=66.5
Q ss_pred hCCCeEEEcCCC---ccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCC
Q 027287 49 ARNIDLVYGGGS---VGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGG 125 (225)
Q Consensus 49 ~~G~~lv~GGg~---~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG 125 (225)
.....+|++|+. ..+...+.++..+.+-+++=........ ... ....+.+...... .. +...+|++| -.||
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~-~~~--~~~~v~~~~~~~~-~~-ll~~~d~~v-~~gG 293 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLG-RID--EGDDCLVVGEVNH-QV-LFGRVAAVV-HHGG 293 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCC-CSS--CCTTEEEESSCCH-HH-HGGGSSEEE-ECCC
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccc-ccc--CCCCEEEecCCCH-HH-HHhhCcEEE-ECCc
Confidence 356677777753 2356667776666666655443221111 110 1112333333332 33 447888866 6778
Q ss_pred cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhhcC
Q 027287 126 YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEYFP 199 (225)
Q Consensus 126 ~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~~~ 199 (225)
.||..|... +++|++++-. +.++. .+.+.+.+.|.-..-..+ .-+++++.+.+.+...
T Consensus 294 ~~t~~Eal~---------~GvP~v~~p~--~~dQ~-~na~~~~~~G~g~~l~~~----~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 294 AGTTTAVTR---------AGAPQVVVPQ--KADQP-YYAGRVADLGVGVAHDGP----TPTVESLSAALATALT 351 (404)
T ss_dssp HHHHHHHHH---------HTCCEEECCC--STTHH-HHHHHHHHHTSEEECSSS----SCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHH---------cCCCEEEcCC--cccHH-HHHHHHHHCCCEeccCcC----CCCHHHHHHHHHHHhC
Confidence 899888752 4799999732 23322 223444454532110000 1167777777776544
No 24
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=90.18 E-value=3.1 Score=36.16 Aligned_cols=70 Identities=14% Similarity=0.296 Sum_probs=40.1
Q ss_pred HHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcC--CHH
Q 027287 111 EMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAP--NAK 188 (225)
Q Consensus 111 ~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~--d~e 188 (225)
.++..||++| ..||.||+.|.. ..++|++++-. ..+.. ..-+.+.+.|.. ...-.+ |++
T Consensus 309 ~ll~~ad~~v-~~~G~~t~~Ea~---------~~G~P~v~~p~--~~~q~-~~a~~l~~~g~g------~~~~~~~~~~~ 369 (415)
T 3rsc_A 309 KVLEQATVCV-THGGMGTLMEAL---------YWGRPLVVVPQ--SFDVQ-PMARRVDQLGLG------AVLPGEKADGD 369 (415)
T ss_dssp HHHHHEEEEE-ESCCHHHHHHHH---------HTTCCEEECCC--SGGGH-HHHHHHHHHTCE------EECCGGGCCHH
T ss_pred HHHhhCCEEE-ECCcHHHHHHHH---------HhCCCEEEeCC--cchHH-HHHHHHHHcCCE------EEcccCCCCHH
Confidence 4557799854 678899987764 15899998732 22222 122334444421 111111 778
Q ss_pred HHHHHHHhhcC
Q 027287 189 ELMNKMEEYFP 199 (225)
Q Consensus 189 e~~~~l~~~~~ 199 (225)
++.+.+.+...
T Consensus 370 ~l~~~i~~ll~ 380 (415)
T 3rsc_A 370 TLLAAVGAVAA 380 (415)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 88877777654
No 25
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=90.02 E-value=8.6 Score=33.09 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=39.2
Q ss_pred HHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcC--CHH
Q 027287 111 EMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAP--NAK 188 (225)
Q Consensus 111 ~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~--d~e 188 (225)
.++..||+|| .+||.+|+.|... .++|+|++... .+.. ...+.+.+.|. ..++-.+ |++
T Consensus 304 ~~l~~ad~~v-~~~g~~t~~Ea~a---------~G~P~v~~p~~--~~q~-~~~~~v~~~g~------g~~~~~~~~~~~ 364 (412)
T 3otg_A 304 ALLPHVDLVV-HHGGSGTTLGALG---------AGVPQLSFPWA--GDSF-ANAQAVAQAGA------GDHLLPDNISPD 364 (412)
T ss_dssp HHGGGCSEEE-ESCCHHHHHHHHH---------HTCCEEECCCS--TTHH-HHHHHHHHHTS------EEECCGGGCCHH
T ss_pred HHHhcCcEEE-ECCchHHHHHHHH---------hCCCEEecCCc--hhHH-HHHHHHHHcCC------EEecCcccCCHH
Confidence 4667899776 7888899877652 47999987532 1111 11122333231 1111112 788
Q ss_pred HHHHHHHhhc
Q 027287 189 ELMNKMEEYF 198 (225)
Q Consensus 189 e~~~~l~~~~ 198 (225)
++.+.|.+..
T Consensus 365 ~l~~ai~~ll 374 (412)
T 3otg_A 365 SVSGAAKRLL 374 (412)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887777654
No 26
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=89.49 E-value=5.6 Score=33.30 Aligned_cols=126 Identities=22% Similarity=0.282 Sum_probs=64.4
Q ss_pred CcceEEE-EeCCCCCCC-------hHHHHHHHHHHHHHHhCCC--eEEEcCCCc--c-------HHH-------------
Q 027287 18 KFNRICV-FCGSSAGKK-------STYKDAAIELGKELVARNI--DLVYGGGSV--G-------LMG------------- 65 (225)
Q Consensus 18 ~~~~V~V-fggs~~~~~-------~~~~~~A~~lG~~LA~~G~--~lv~GGg~~--G-------lM~------------- 65 (225)
+.++|.| +|||....+ +...+.|+++.++. +.|+ .||+|||+. | +-.
T Consensus 8 ~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~-~~G~~vviV~gGG~~~~~~~~~~~g~~~~~~d~~g~l~t~~ 86 (243)
T 3ek6_A 8 SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQ-QAGAQVALVIGGGNIFRGAGLAASGMDRVTGDHMGMLATVI 86 (243)
T ss_dssp SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHH-HTTCEEEEEECSTTTSCSTTTSCSSSCHHHHHHHHHHHHHH
T ss_pred cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHH-HCCCeEEEEECCCHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 4567777 777776532 23445555555443 3455 668888752 2 211
Q ss_pred --HHHHHHH-hcCCeEEEEeCCccccCCCCCCCCceEeecCCH-HHHHHHHHhhCCEEEEecCC---cccHHHHHHHHHH
Q 027287 66 --LISQAVY-DGGRHVIGVIPKTLMPREITGETVGEVKPVADM-HQRKAEMAKHSDAFIALPGG---YGTLEELLEVITW 138 (225)
Q Consensus 66 --a~a~gA~-~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m-~~Rk~~mv~~sDa~IvlpGG---~GTL~Ei~~a~~~ 138 (225)
.+...|+ +.|...+++.+.... ..++ ++ ..|-..+++.....|+-||. ++|-|.++..++-
T Consensus 87 N~~~l~~al~~~G~~a~~~~~~~~~-------~v~~-----~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~ 154 (243)
T 3ek6_A 87 NALAMQDALEKLGAKVRVMSAIKIN-------DVCE-----DFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAI 154 (243)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCBT-------TTBE-----ECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEechhhcC-------cccC-----cCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHH
Confidence 1122333 456678888653211 1111 22 23333444544444444432 5788887766542
Q ss_pred HHhCCCCCcEEEEeCCCCch
Q 027287 139 AQLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 139 ~qlg~~~kPiill~~~g~w~ 158 (225)
.++ .++=+++-+.+|.|+
T Consensus 155 -~l~-Ad~li~lTdVdGvy~ 172 (243)
T 3ek6_A 155 -EIG-ADLLLKATKVDGVYD 172 (243)
T ss_dssp -HHT-CSEEEEECSSSSCBS
T ss_pred -HcC-CCEEEEEeCCCccCC
Confidence 333 234444557888886
No 27
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=88.85 E-value=5.7 Score=34.77 Aligned_cols=67 Identities=19% Similarity=0.178 Sum_probs=40.0
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc---CCHH
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA---PNAK 188 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~---~d~e 188 (225)
++..||+|| ..||.||+.|.. .+++|++++.. +.+. ....+.+.+.|.- +.+. -+++
T Consensus 318 ~l~~~d~~v-~~~G~~t~~Ea~---------~~G~P~i~~p~--~~dQ-~~na~~l~~~g~g-------~~~~~~~~~~~ 377 (424)
T 2iya_A 318 ILTKASAFI-THAGMGSTMEAL---------SNAVPMVAVPQ--IAEQ-TMNAERIVELGLG-------RHIPRDQVTAE 377 (424)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHH---------HTTCCEEECCC--SHHH-HHHHHHHHHTTSE-------EECCGGGCCHH
T ss_pred HHhhCCEEE-ECCchhHHHHHH---------HcCCCEEEecC--ccch-HHHHHHHHHCCCE-------EEcCcCCCCHH
Confidence 567899755 578899988875 26899999753 2222 2223334444421 1111 1778
Q ss_pred HHHHHHHhhc
Q 027287 189 ELMNKMEEYF 198 (225)
Q Consensus 189 e~~~~l~~~~ 198 (225)
++.+.|++..
T Consensus 378 ~l~~~i~~ll 387 (424)
T 2iya_A 378 KLREAVLAVA 387 (424)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777777654
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=88.40 E-value=3.7 Score=35.91 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=69.6
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHH-hCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCC
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELV-ARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETV 96 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA-~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~ 96 (225)
+.+.|.|++||.. ... ..+...+.-..|. +.++.++..+|+ +-.+...+...+.+..+. |.|
T Consensus 179 ~~~~ilv~gGs~g-~~~-~~~~~~~al~~l~~~~~~~vi~~~G~-~~~~~~~~~~~~~~~~~~-v~~------------- 241 (365)
T 3s2u_A 179 RRVNLLVLGGSLG-AEP-LNKLLPEALAQVPLEIRPAIRHQAGR-QHAEITAERYRTVAVEAD-VAP------------- 241 (365)
T ss_dssp SCCEEEECCTTTT-CSH-HHHHHHHHHHTSCTTTCCEEEEECCT-TTHHHHHHHHHHTTCCCE-EES-------------
T ss_pred CCcEEEEECCcCC-ccc-cchhhHHHHHhcccccceEEEEecCc-cccccccceecccccccc-ccc-------------
Confidence 4467888887653 333 2233223222232 346777766665 555555444444332211 111
Q ss_pred ceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCC-CchHHHHHHHHHHHcCCCCc
Q 027287 97 GEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDG-YYNSLLTFIDKAVEEGFISP 175 (225)
Q Consensus 97 ~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g-~w~~l~~~l~~~~~~gfi~~ 175 (225)
..++|. .++..||.+| ..+|.+|+.|+.. .++|.|++.... .-++=..--+.+.+.|.-
T Consensus 242 ----f~~dm~----~~l~~aDlvI-~raG~~Tv~E~~a---------~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a-- 301 (365)
T 3s2u_A 242 ----FISDMA----AAYAWADLVI-CRAGALTVSELTA---------AGLPAFLVPLPHAIDDHQTRNAEFLVRSGAG-- 301 (365)
T ss_dssp ----CCSCHH----HHHHHCSEEE-ECCCHHHHHHHHH---------HTCCEEECC-----CCHHHHHHHHHHTTTSE--
T ss_pred ----chhhhh----hhhccceEEE-ecCCcchHHHHHH---------hCCCeEEeccCCCCCcHHHHHHHHHHHCCCE--
Confidence 123443 3568899877 4567899998862 369998864321 112211112334554421
Q ss_pred cccCcEEEc--CCHHHHHHHHHhhc
Q 027287 176 NARHIIVSA--PNAKELMNKMEEYF 198 (225)
Q Consensus 176 ~~~~~i~~~--~d~ee~~~~l~~~~ 198 (225)
.++-. -|++++.+.|.+..
T Consensus 302 ----~~l~~~~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 302 ----RLLPQKSTGAAELAAQLSEVL 322 (365)
T ss_dssp ----EECCTTTCCHHHHHHHHHHHH
T ss_pred ----EEeecCCCCHHHHHHHHHHHH
Confidence 11111 15777777777654
No 29
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=88.39 E-value=7.6 Score=33.17 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=39.1
Q ss_pred HHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcC--CHH
Q 027287 111 EMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAP--NAK 188 (225)
Q Consensus 111 ~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~--d~e 188 (225)
.++..||++ +..||.||+.|.. ..++|++++-.. .++.. ..-+.+.+.|.. ...-.+ |++
T Consensus 293 ~ll~~ad~~-v~~~G~~t~~Ea~---------~~G~P~v~~p~~-~~~q~-~~a~~~~~~g~g------~~~~~~~~~~~ 354 (402)
T 3ia7_A 293 SVLAHARAC-LTHGTTGAVLEAF---------AAGVPLVLVPHF-ATEAA-PSAERVIELGLG------SVLRPDQLEPA 354 (402)
T ss_dssp HHHTTEEEE-EECCCHHHHHHHH---------HTTCCEEECGGG-CGGGH-HHHHHHHHTTSE------EECCGGGCSHH
T ss_pred HHHhhCCEE-EECCCHHHHHHHH---------HhCCCEEEeCCC-cccHH-HHHHHHHHcCCE------EEccCCCCCHH
Confidence 456778875 4678889987764 257999987420 22222 122334444421 111111 778
Q ss_pred HHHHHHHhhc
Q 027287 189 ELMNKMEEYF 198 (225)
Q Consensus 189 e~~~~l~~~~ 198 (225)
++.+.+.+..
T Consensus 355 ~l~~~~~~ll 364 (402)
T 3ia7_A 355 SIREAVERLA 364 (402)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 30
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=87.68 E-value=4.4 Score=34.84 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=24.5
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
++..||.+|. +|| +|+.|+.. .++|.+++-.
T Consensus 222 ~m~~aDlvI~-~gG-~T~~E~~~---------~g~P~i~ip~ 252 (282)
T 3hbm_A 222 LMNESNKLII-SAS-SLVNEALL---------LKANFKAICY 252 (282)
T ss_dssp HHHTEEEEEE-ESS-HHHHHHHH---------TTCCEEEECC
T ss_pred HHHHCCEEEE-CCc-HHHHHHHH---------cCCCEEEEeC
Confidence 5678999998 677 79999862 4799998753
No 31
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=87.16 E-value=11 Score=32.85 Aligned_cols=128 Identities=17% Similarity=0.136 Sum_probs=64.8
Q ss_pred HHHHHh-CCCeEEEcCCCcc----HHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHhhCCE
Q 027287 44 GKELVA-RNIDLVYGGGSVG----LMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDA 118 (225)
Q Consensus 44 G~~LA~-~G~~lv~GGg~~G----lM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa 118 (225)
-++|.+ ....+|++|+. | ..+.+.++..+.+-+++=++...... . .+.-..+.+...... ..+ ...+|+
T Consensus 231 ~~~l~~~~~~v~v~~Gs~-~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~-~~~~~~v~~~~~~~~-~~~-l~~~d~ 304 (415)
T 1iir_A 231 AAFLDAGPPPVYLGFGSL-GAPADAVRVAIDAIRAHGRRVILSRGWADLV--L-PDDGADCFAIGEVNH-QVL-FGRVAA 304 (415)
T ss_dssp HHHHHTSSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC--C-SSCGGGEEECSSCCH-HHH-GGGSSE
T ss_pred HHHHhhCCCeEEEeCCCC-CCcHHHHHHHHHHHHHCCCeEEEEeCCCccc--c-cCCCCCEEEeCcCCh-HHH-HhhCCE
Confidence 344533 35777888763 3 34445555545555554433222111 1 011112344333333 333 489999
Q ss_pred EEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc---CCHHHHHHHHH
Q 027287 119 FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA---PNAKELMNKME 195 (225)
Q Consensus 119 ~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~---~d~ee~~~~l~ 195 (225)
||- .||.||+.|... +++|++++.. +.++. ...+.+.+.|.- +.+. -+++++.+.|+
T Consensus 305 ~v~-~~G~~t~~Ea~~---------~G~P~i~~p~--~~dQ~-~na~~l~~~g~g-------~~~~~~~~~~~~l~~~i~ 364 (415)
T 1iir_A 305 VIH-HGGAGTTHVAAR---------AGAPQILLPQ--MADQP-YYAGRVAELGVG-------VAHDGPIPTFDSLSAALA 364 (415)
T ss_dssp EEE-CCCHHHHHHHHH---------HTCCEEECCC--STTHH-HHHHHHHHHTSE-------EECSSSSCCHHHHHHHHH
T ss_pred EEe-CCChhHHHHHHH---------cCCCEEECCC--CCccH-HHHHHHHHCCCc-------ccCCcCCCCHHHHHHHHH
Confidence 886 788899888862 4799999853 23332 223334343421 1111 26777777776
Q ss_pred hh
Q 027287 196 EY 197 (225)
Q Consensus 196 ~~ 197 (225)
+.
T Consensus 365 ~l 366 (415)
T 1iir_A 365 TA 366 (415)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 32
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=86.46 E-value=4.2 Score=36.06 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=40.4
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc---CCHH
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA---PNAK 188 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~---~d~e 188 (225)
++..||+||. .||.||+.|.. .+++|++++.. +.+. ....+.+.+.|.- +.+- -|++
T Consensus 332 ll~~ad~~V~-~~G~~t~~Ea~---------~~G~P~i~~p~--~~dQ-~~na~~l~~~g~g-------~~~~~~~~~~~ 391 (441)
T 2yjn_A 332 LLPTCAATVH-HGGPGSWHTAA---------IHGVPQVILPD--GWDT-GVRAQRTQEFGAG-------IALPVPELTPD 391 (441)
T ss_dssp HGGGCSEEEE-CCCHHHHHHHH---------HTTCCEEECCC--SHHH-HHHHHHHHHHTSE-------EECCTTTCCHH
T ss_pred HHhhCCEEEE-CCCHHHHHHHH---------HhCCCEEEeCC--cccH-HHHHHHHHHcCCE-------EEcccccCCHH
Confidence 4589999886 78899988775 25799999853 2222 2223334444421 1111 1677
Q ss_pred HHHHHHHhhc
Q 027287 189 ELMNKMEEYF 198 (225)
Q Consensus 189 e~~~~l~~~~ 198 (225)
++.+.|.+..
T Consensus 392 ~l~~~i~~ll 401 (441)
T 2yjn_A 392 QLRESVKRVL 401 (441)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777776654
No 33
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=86.44 E-value=1.1 Score=35.95 Aligned_cols=41 Identities=17% Similarity=0.025 Sum_probs=34.4
Q ss_pred HHHHHHHHhhCCEEEEe-cC---CcccHHHHHHHHHHHHhCCCCCcEEEEe
Q 027287 106 HQRKAEMAKHSDAFIAL-PG---GYGTLEELLEVITWAQLGIHDKPVGLLN 152 (225)
Q Consensus 106 ~~Rk~~mv~~sDa~Ivl-pG---G~GTL~Ei~~a~~~~qlg~~~kPiill~ 152 (225)
..+....++.||++|++ .| -.||.-|+-.++. .+|||+++.
T Consensus 72 ~~~D~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~a------lgKPVv~l~ 116 (167)
T 1s2d_A 72 YQNDLTGISNATCGVFLYDMDQLDDGSAFXIGFMRA------MHKPVILVP 116 (167)
T ss_dssp HHHHHHHHHHCSEEEEEEESSSCCHHHHHHHHHHHH------TTCCEEEEE
T ss_pred HHHHHHHHHhCCEEEEECCCCCCCCCceeehhhHhh------CCCeEEEEE
Confidence 67888889999999996 33 4799999998885 579999995
No 34
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=86.33 E-value=7.8 Score=33.88 Aligned_cols=131 Identities=17% Similarity=0.117 Sum_probs=66.3
Q ss_pred HHHHHHh-CCCeEEEcCCCcc------HHHHHHHHHHhcCCeEEEEeCCcccc-CCCCCCCCceEeecCCHHHHHHHHHh
Q 027287 43 LGKELVA-RNIDLVYGGGSVG------LMGLISQAVYDGGRHVIGVIPKTLMP-REITGETVGEVKPVADMHQRKAEMAK 114 (225)
Q Consensus 43 lG~~LA~-~G~~lv~GGg~~G------lM~a~a~gA~~aGG~viGIiP~~~~~-~e~~~~~~~~~~~~~~m~~Rk~~mv~ 114 (225)
+-++|.+ ....+|++|+. + .+..+.++..+.+-+++=++...... ...+ ..+.+...... .. +..
T Consensus 229 ~~~~l~~~~~~v~v~~Gs~-~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~----~~v~~~~~~~~-~~-ll~ 301 (416)
T 1rrv_A 229 LEAFLAAGSPPVHIGFGSS-SGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDR----DDCFAIDEVNF-QA-LFR 301 (416)
T ss_dssp HHHHHHSSSCCEEECCTTC-CSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCC----TTEEEESSCCH-HH-HGG
T ss_pred HHHHHhcCCCeEEEecCCC-CccChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCC----CCEEEeccCCh-HH-Hhc
Confidence 3344533 35677777763 4 24445555545565554443322111 1111 12333333321 23 448
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHH
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKM 194 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l 194 (225)
.+|+||- .||.||+.|... +++|++++.. +.++. ...+.+.+.|.--.-..+ .-+++++.+.|
T Consensus 302 ~~d~~v~-~~G~~t~~Ea~~---------~G~P~i~~p~--~~dQ~-~na~~l~~~g~g~~~~~~----~~~~~~l~~~i 364 (416)
T 1rrv_A 302 RVAAVIH-HGSAGTEHVATR---------AGVPQLVIPR--NTDQP-YFAGRVAALGIGVAHDGP----TPTFESLSAAL 364 (416)
T ss_dssp GSSEEEE-CCCHHHHHHHHH---------HTCCEEECCC--SBTHH-HHHHHHHHHTSEEECSSS----CCCHHHHHHHH
T ss_pred cCCEEEe-cCChhHHHHHHH---------cCCCEEEccC--CCCcH-HHHHHHHHCCCccCCCCC----CCCHHHHHHHH
Confidence 9999886 788999998862 4799999853 33332 223334444421100000 12677777777
Q ss_pred Hhh
Q 027287 195 EEY 197 (225)
Q Consensus 195 ~~~ 197 (225)
++.
T Consensus 365 ~~l 367 (416)
T 1rrv_A 365 TTV 367 (416)
T ss_dssp HHH
T ss_pred HHh
Confidence 666
No 35
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=84.31 E-value=0.87 Score=39.42 Aligned_cols=102 Identities=14% Similarity=0.175 Sum_probs=51.2
Q ss_pred hCCCeEEEcCCCccHHHHH---HHHHHhcC-CeEEEEeCCccccCCCCCCCCceEeec-CCHHHH-HHHHHhhCCEEEEe
Q 027287 49 ARNIDLVYGGGSVGLMGLI---SQAVYDGG-RHVIGVIPKTLMPREITGETVGEVKPV-ADMHQR-KAEMAKHSDAFIAL 122 (225)
Q Consensus 49 ~~G~~lv~GGg~~GlM~a~---a~gA~~aG-G~viGIiP~~~~~~e~~~~~~~~~~~~-~~m~~R-k~~mv~~sDa~Ivl 122 (225)
..|+.+|.||.. |-.+|+ +++|+.+| |.|.-+.|....+. .....-++.+. .+.... ..-....+|++++
T Consensus 29 ~~G~vlvigGs~-~~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~--~~~~~Pe~m~~~~~~~~~~~~~~l~~~davvi- 104 (279)
T 3rpz_A 29 TYGTALLLAGSD-DMPGAALLAGLGAMRSGLGKLVIGTSENVIPL--IVPVLPEATYWRDGWKKAADAQLEETYRAIAI- 104 (279)
T ss_dssp GGCEEEEECCBT-TBCHHHHHHHHHHHTTTCSEEEEEECTTTHHH--HTTTCTTCEEEETHHHHTTTSCCSSCCSEEEE-
T ss_pred CCCEEEEEeCCC-CCCcHHHHHHHHHHHhCCCeEEEEecHHHHHH--HHhcCCeeEEccccccchhhHhhccCCCEEEE-
Confidence 369999999975 666666 56666666 66666666543210 00111122221 111100 0012256787776
Q ss_pred cCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCc
Q 027287 123 PGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 157 (225)
Q Consensus 123 pGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w 157 (225)
+-|.|+-++..+.+. ++-...+|+|+ |.++.+
T Consensus 105 GPGlg~~~~~~~~~~--~~l~~~~p~Vl-DAdal~ 136 (279)
T 3rpz_A 105 GPGLPQTESVQQAVD--HVLTADCPVIL-DAGALA 136 (279)
T ss_dssp CTTCCCCHHHHHHHH--HHTTSSSCEEE-CGGGCC
T ss_pred CCCCCCCHHHHHHHH--HHHhhCCCEEE-ECCccc
Confidence 445676444333332 22234678865 665554
No 36
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=81.81 E-value=4.4 Score=35.08 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=25.2
Q ss_pred HHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEe
Q 027287 110 AEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 152 (225)
Q Consensus 110 ~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~ 152 (225)
..++..||+|| ..||.||+.|.. .+++|++++.
T Consensus 295 ~~ll~~ad~~v-~~gG~~t~~Ea~---------~~G~P~v~~p 327 (398)
T 4fzr_A 295 SAIMPACDVVV-HHGGHGTTLTCL---------SEGVPQVSVP 327 (398)
T ss_dssp HHHGGGCSEEE-ECCCHHHHHHHH---------HTTCCEEECC
T ss_pred HHHHhhCCEEE-ecCCHHHHHHHH---------HhCCCEEecC
Confidence 34667799988 688899987765 2689999874
No 37
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=80.54 E-value=8.8 Score=35.15 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=41.6
Q ss_pred HHHhhCC-EEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHc-CCCCccccCcEEEcCCHH
Q 027287 111 EMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEE-GFISPNARHIIVSAPNAK 188 (225)
Q Consensus 111 ~mv~~sD-a~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~-gfi~~~~~~~i~~~~d~e 188 (225)
.+..+++ ..++-.||.||..|.. + +++|++++-. +.|+... .+.+.+. |.--.-... .-+.+
T Consensus 339 ~vL~h~~v~~fvtH~G~~S~~Eal--~-------~GvP~i~~P~--~~DQ~~N-a~~v~~~~g~Gv~l~~~----~~~~~ 402 (454)
T 3hbf_A 339 EILKHSSVGVFLTHSGWNSVLECI--V-------GGVPMISRPF--FGDQGLN-TILTESVLEIGVGVDNG----VLTKE 402 (454)
T ss_dssp HHHHSTTEEEEEECCCHHHHHHHH--H-------HTCCEEECCC--STTHHHH-HHHHHTTSCSEEECGGG----SCCHH
T ss_pred HHHhhcCcCeEEecCCcchHHHHH--H-------cCCCEecCcc--cccHHHH-HHHHHHhhCeeEEecCC----CCCHH
Confidence 4557778 4777789999999886 2 4799998732 4454433 2334442 421100000 12566
Q ss_pred HHHHHHHhhcC
Q 027287 189 ELMNKMEEYFP 199 (225)
Q Consensus 189 e~~~~l~~~~~ 199 (225)
++.+.+++...
T Consensus 403 ~l~~av~~ll~ 413 (454)
T 3hbf_A 403 SIKKALELTMS 413 (454)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHC
Confidence 66666666543
No 38
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=79.24 E-value=16 Score=33.97 Aligned_cols=76 Identities=13% Similarity=0.093 Sum_probs=41.7
Q ss_pred CCEEEE--e--cCCcccH-HHHHHHHHHHHhCC-CCCcEEEE-eCCCC---chHHHHHHHHHHHcCCCCccccCcEEEcC
Q 027287 116 SDAFIA--L--PGGYGTL-EELLEVITWAQLGI-HDKPVGLL-NVDGY---YNSLLTFIDKAVEEGFISPNARHIIVSAP 185 (225)
Q Consensus 116 sDa~Iv--l--pGG~GTL-~Ei~~a~~~~qlg~-~~kPiill-~~~g~---w~~l~~~l~~~~~~gfi~~~~~~~i~~~~ 185 (225)
.|++++ + |+..... +++.+++.-.+-.. .+||+++. ...|. -+...+..+.+.+.| |-..+
T Consensus 329 vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~~~~~~~~~~L~~aG---------Ip~f~ 399 (480)
T 3dmy_A 329 VRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAG---------IAVVS 399 (480)
T ss_dssp EEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTSTTCHHHHHHHHHHTT---------CEECS
T ss_pred CCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccchhhHHHHHHHHHhCC---------CcccC
Confidence 466665 4 5655543 77777764333221 26995332 12222 122222233344444 67899
Q ss_pred CHHHHHHHHHhhcCC
Q 027287 186 NAKELMNKMEEYFPQ 200 (225)
Q Consensus 186 d~ee~~~~l~~~~~~ 200 (225)
+|+++++.+......
T Consensus 400 spe~Av~a~~~l~~~ 414 (480)
T 3dmy_A 400 SLPEATLLAAALIHP 414 (480)
T ss_dssp SHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999887643
No 39
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=78.49 E-value=8.9 Score=34.61 Aligned_cols=122 Identities=14% Similarity=0.095 Sum_probs=63.4
Q ss_pred cHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHh--hCCEEEE-ecCCcccHHHHHHHHHH
Q 027287 62 GLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAK--HSDAFIA-LPGGYGTLEELLEVITW 138 (225)
Q Consensus 62 GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~--~sDa~Iv-lpGG~GTL~Ei~~a~~~ 138 (225)
|+=-+.++.+..+||.. .... +...... ...+..--+++.. ..|++++ ++||+-.-+++.+.+.-
T Consensus 258 Gl~~~t~D~i~~~G~~~-----aN~l--D~gG~a~-----~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~ 325 (397)
T 3ufx_B 258 GLVMYTLDLVNRVGGKP-----ANFL--DIGGGAK-----ADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIR 325 (397)
T ss_dssp HHHHHHHHHHHHTTCCB-----SEEE--ECCSCCC-----HHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCCc-----CCcE--ecCCCCC-----HHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHH
Confidence 66667788888888862 1111 1111100 1122222222332 3577766 78998888899877753
Q ss_pred HHhC-CCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhhcCCcccccccccccccc
Q 027287 139 AQLG-IHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEYFPQHERVASKLSWENEQ 214 (225)
Q Consensus 139 ~qlg-~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~~~~w~~~~ 214 (225)
..-. ..+|||++--.++-.+.-. +.+.+.| |...++++++.+.+.+... +..|.+.-
T Consensus 326 a~~~~~~~kPvvv~~~G~~~~~~~---~~l~~~g---------ip~~~~~e~Aa~~~~~l~~-------~a~w~~~~ 383 (397)
T 3ufx_B 326 ALEEGLLTKPVVMRVAGTAEEEAK---KLLEGKP---------VYMYPTSIEAAKVTVAMKG-------GAAWLEFA 383 (397)
T ss_dssp HHTTTCCCSCEEEEEEEECHHHHH---HHTTTSS---------EEECSSHHHHHHHHHHSCC-------SCC-----
T ss_pred HHHhhCCCCcEEEEccCCCHHHHH---HHHHhCC---------CcccCCHHHHHHHHHHHHH-------HhHHhhCC
Confidence 3212 1479998632211112222 2121211 8899999999999987533 23677633
No 40
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=78.48 E-value=14 Score=30.16 Aligned_cols=41 Identities=22% Similarity=0.341 Sum_probs=22.6
Q ss_pred CCEEEEecCC----cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCch
Q 027287 116 SDAFIALPGG----YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 116 sDa~IvlpGG----~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~ 158 (225)
...+++++|+ +++-|.++..++ ..++ ..+=+++-+.+|.|+
T Consensus 126 ~g~ipVv~g~~g~~~~~~D~~Aa~lA-~~l~-Ad~liilTdVdGvy~ 170 (239)
T 1ybd_A 126 EGKVVIFAAGTGNPFFTTDTAAALRG-AEMN-CDVMLKATNVDGVYT 170 (239)
T ss_dssp TTCEEEEESTTSSTTCCHHHHHHHHH-HHTT-CSEEEEECSSSSCBS
T ss_pred CCcEEEEECCccCCCCCcHHHHHHHH-HhcC-CCEEEEeeCCCccCC
Confidence 3445555554 457777776554 2333 234444457788875
No 41
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=78.42 E-value=14 Score=32.05 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=23.7
Q ss_pred HHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEe
Q 027287 111 EMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 152 (225)
Q Consensus 111 ~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~ 152 (225)
.++..||+|| ..||.+|+.|.. .+++|+++..
T Consensus 295 ~~l~~ad~~v-~~~G~~t~~Ea~---------~~G~P~i~~p 326 (430)
T 2iyf_A 295 AILRQADLFV-THAGAGGSQEGL---------ATATPMIAVP 326 (430)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---------HTTCCEEECC
T ss_pred HHhhccCEEE-ECCCccHHHHHH---------HhCCCEEECC
Confidence 3567899765 578888877765 1589999874
No 42
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=77.78 E-value=4.2 Score=34.31 Aligned_cols=70 Identities=19% Similarity=0.278 Sum_probs=40.4
Q ss_pred CeEEEcCCC--------------ccHHHHH-HHHHHhcCCeEEEEe-CCccccCCCCCCCCceEeecCCH---HHHHHHH
Q 027287 52 IDLVYGGGS--------------VGLMGLI-SQAVYDGGRHVIGVI-PKTLMPREITGETVGEVKPVADM---HQRKAEM 112 (225)
Q Consensus 52 ~~lv~GGg~--------------~GlM~a~-a~gA~~aGG~viGIi-P~~~~~~e~~~~~~~~~~~~~~m---~~Rk~~m 112 (225)
..||||||+ .|-|+.+ ++.+.+.|..|+-+- |....+ ..+...+.+.+.+. .+.-...
T Consensus 5 ~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~---~~~~~~~~~~v~s~~em~~~v~~~ 81 (232)
T 2gk4_A 5 KILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP---EPHPNLSIREITNTKDLLIEMQER 81 (232)
T ss_dssp EEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC---CCCTTEEEEECCSHHHHHHHHHHH
T ss_pred EEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---cCCCCeEEEEHhHHHHHHHHHHHh
Confidence 467899862 4877766 778888899988773 333211 11122344444443 3333333
Q ss_pred HhhCCEEEEecC
Q 027287 113 AKHSDAFIALPG 124 (225)
Q Consensus 113 v~~sDa~IvlpG 124 (225)
....|++|-..|
T Consensus 82 ~~~~Dili~aAA 93 (232)
T 2gk4_A 82 VQDYQVLIHSMA 93 (232)
T ss_dssp GGGCSEEEECSB
T ss_pred cCCCCEEEEcCc
Confidence 456888887766
No 43
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=75.25 E-value=17 Score=31.31 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=23.7
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEe
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 152 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~ 152 (225)
++..||+|| ..||.||+.|... .++|++++.
T Consensus 296 ll~~ad~~v-~~~G~~t~~Eal~---------~G~P~v~~p 326 (398)
T 3oti_A 296 LLRTCTAVV-HHGGGGTVMTAID---------AGIPQLLAP 326 (398)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHHH---------HTCCEEECC
T ss_pred HHhhCCEEE-ECCCHHHHHHHHH---------hCCCEEEcC
Confidence 557799876 6899999877752 479999863
No 44
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=71.73 E-value=13 Score=34.64 Aligned_cols=102 Identities=20% Similarity=0.102 Sum_probs=50.1
Q ss_pred CCCeEEEcCCCccHHHHH---HHHHHhcC-CeEEEEeCCccccC-CCCCCCCceEeecC---C----HHHHHHHHHhhCC
Q 027287 50 RNIDLVYGGGSVGLMGLI---SQAVYDGG-RHVIGVIPKTLMPR-EITGETVGEVKPVA---D----MHQRKAEMAKHSD 117 (225)
Q Consensus 50 ~G~~lv~GGg~~GlM~a~---a~gA~~aG-G~viGIiP~~~~~~-e~~~~~~~~~~~~~---~----m~~Rk~~mv~~sD 117 (225)
.|+.+|.||.. |-.+|+ +++|+.+| |.|.-+.|....+. ....++........ . -.+.-.-+...+|
T Consensus 244 ~G~vlvigGs~-~~~GA~~Laa~aAlr~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~~~~~~~~~~~d 322 (502)
T 3rss_A 244 YGKVLIIAGSR-LYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVD 322 (502)
T ss_dssp GCEEEEECCCS-SCCSHHHHHHHHHHHTTCSEEEEEEETTTHHHHHHHCTTSEEEEECCSSSSCCGGGHHHHHHHHTTCS
T ss_pred CceEEEEECCC-CCCCHHHHHHHHHHHhCcCeEEEEEcHHHHHHHhhcCCeEEEecccccccccchhhHHHHHHHhccCC
Confidence 69999999974 555554 66777776 56666666543210 00011111111111 0 1122233567789
Q ss_pred EEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCC
Q 027287 118 AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDG 155 (225)
Q Consensus 118 a~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g 155 (225)
++++=|| .|+-++..+.+.. .+...++|+|| |.++
T Consensus 323 avviGpG-lg~~~~~~~~~~~-~l~~~~~pvVl-Dadg 357 (502)
T 3rss_A 323 VVAIGPG-LGNNEHVREFVNE-FLKTLEKPAVI-DADA 357 (502)
T ss_dssp EEEECTT-CCCSHHHHHHHHH-HHHHCCSCEEE-CHHH
T ss_pred EEEEeCC-CCCCHHHHHHHHH-HHHhcCCCEEE-eCcc
Confidence 8887765 4443333322210 11124789865 6543
No 45
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=71.71 E-value=16 Score=33.08 Aligned_cols=71 Identities=11% Similarity=0.025 Sum_probs=41.3
Q ss_pred HHhhCCE-EEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHH-HcCCCCccccCcEEEcCCHHH
Q 027287 112 MAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAV-EEGFISPNARHIIVSAPNAKE 189 (225)
Q Consensus 112 mv~~sDa-~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~-~~gfi~~~~~~~i~~~~d~ee 189 (225)
++.++++ .++--||.||..|.. + +++|++++-. +.++.. ..+.++ +.|.--.-. . .-+.++
T Consensus 366 ~L~h~~~~~~vth~G~~s~~Eal--~-------~GvP~i~~P~--~~dQ~~-na~~~~~~~G~g~~l~-~----~~~~~~ 428 (482)
T 2pq6_A 366 VLNHPSIGGFLTHCGWNSTTESI--C-------AGVPMLCWPF--FADQPT-DCRFICNEWEIGMEID-T----NVKREE 428 (482)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHH--H-------HTCCEEECCC--STTHHH-HHHHHHHTSCCEEECC-S----SCCHHH
T ss_pred HhcCCCCCEEEecCCcchHHHHH--H-------cCCCEEecCc--ccchHH-HHHHHHHHhCEEEEEC-C----CCCHHH
Confidence 4566664 677789999999886 2 5799999732 444433 233344 334311000 0 126777
Q ss_pred HHHHHHhhcC
Q 027287 190 LMNKMEEYFP 199 (225)
Q Consensus 190 ~~~~l~~~~~ 199 (225)
+.+.+++...
T Consensus 429 l~~~i~~ll~ 438 (482)
T 2pq6_A 429 LAKLINEVIA 438 (482)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 7777766653
No 46
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=69.91 E-value=46 Score=27.49 Aligned_cols=126 Identities=20% Similarity=0.305 Sum_probs=61.4
Q ss_pred CcceEEE-EeCCCCCC------ChH-HHHHHHHHHHHHHhCCC--eEEEcCCCc--cHH---------------H----H
Q 027287 18 KFNRICV-FCGSSAGK------KST-YKDAAIELGKELVARNI--DLVYGGGSV--GLM---------------G----L 66 (225)
Q Consensus 18 ~~~~V~V-fggs~~~~------~~~-~~~~A~~lG~~LA~~G~--~lv~GGg~~--GlM---------------~----a 66 (225)
+.++|.| +|||.... ++. ..+.|+++.++. +.|+ .||.|||+. |.. + .
T Consensus 6 ~~k~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~-~~G~~vvlV~gGG~~~~g~~~~~~G~~~~~~~~~~~~la~~ 84 (240)
T 4a7w_A 6 KNKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLV-ENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSGDYMGMLATV 84 (240)
T ss_dssp CCCEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHH-HTTCEEEEEECCTTTC---------CCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHH-HCCCcEEEEECCcHHHhHhHHHhcCCCCCCCHHHHHHHHHH
Confidence 3566777 88777652 343 334455555433 3454 667899552 111 1 1
Q ss_pred HHHH----H-HhcCCeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCC----cccHHHHHHHHH
Q 027287 67 ISQA----V-YDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGG----YGTLEELLEVIT 137 (225)
Q Consensus 67 ~a~g----A-~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG----~GTL~Ei~~a~~ 137 (225)
.+.. + .+.|..++++.+..... ..+.+ + ..+-..+++.. .+++++|| ++|-|.++..++
T Consensus 85 ~n~~l~~~~l~~~G~~av~lt~~d~~~-------~~~~~---~-~~~i~~lL~~g-~ipVi~~~~g~~~~~~D~~Aa~lA 152 (240)
T 4a7w_A 85 INAVAMQEALEHIGLDTRVQSAIEIKE-------ICESY---I-YRKAIRHLEKG-RVVIFGAGTGNPFFTTDTAATLRA 152 (240)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCCTT-------TSEEC---C-HHHHHHHHHTT-CEEEEESTTSCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEecHHHcCc-------ccCcC---c-HHHHHHHHHCC-CEEEEeCCCCCCCCChHHHHHHHH
Confidence 1111 1 13577888876543211 11111 0 22223334444 44555444 467777775554
Q ss_pred HHHhCCCCCcEEEEeCCCCch
Q 027287 138 WAQLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 138 ~~qlg~~~kPiill~~~g~w~ 158 (225)
..++ ..+=+++-+.+|.|+
T Consensus 153 -~~l~-Ad~li~lTdVdGvy~ 171 (240)
T 4a7w_A 153 -IEIG-SDLIIKATKVDGIYD 171 (240)
T ss_dssp -HHTT-CSEEEEEESSSSEES
T ss_pred -HHcC-CCEEEEccCCCceEC
Confidence 2333 245555567888775
No 47
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=67.64 E-value=58 Score=27.84 Aligned_cols=127 Identities=18% Similarity=0.302 Sum_probs=63.0
Q ss_pred CcceEEE-EeCCCCCC-----Ch-HHHHHHHHHHHHHHhCCC--eEEEcCCCc---------cH-------HHHHH----
Q 027287 18 KFNRICV-FCGSSAGK-----KS-TYKDAAIELGKELVARNI--DLVYGGGSV---------GL-------MGLIS---- 68 (225)
Q Consensus 18 ~~~~V~V-fggs~~~~-----~~-~~~~~A~~lG~~LA~~G~--~lv~GGg~~---------Gl-------M~a~a---- 68 (225)
+.++|.| +|||.... ++ ...+.|+++.++. +.|+ .||.|||.. |+ |+.++
T Consensus 49 ~~krIViKlGGs~L~~~~~~ld~~~i~~la~~I~~l~-~~G~~vviV~GgG~i~~g~~~~~~gl~~~~~d~~g~lat~~n 127 (281)
T 3nwy_A 49 GYSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIADVV-RGGVQIAVVIGGGNFFRGAQLQQLGMERTRSDYMGMLGTVMN 127 (281)
T ss_dssp CCSEEEEEECGGGGGTTSSSCCHHHHHHHHHHHHHHH-HTTCEEEEEECCTTC---CCTTTTTCCHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEEchhhccCCCCCCCHHHHHHHHHHHHHHH-HCCCeEEEEECChhHhhhHHHHhcCCCccchhHHHHHHHHHH
Confidence 4567777 77776542 33 3445556655544 4454 668987653 21 11111
Q ss_pred -----HHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCC----cccHHHHHHHHHHH
Q 027287 69 -----QAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGG----YGTLEELLEVITWA 139 (225)
Q Consensus 69 -----~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG----~GTL~Ei~~a~~~~ 139 (225)
....+.|-.+++.+.-... .+.+ .....|...+++.. .++|+.|+ +++-|.++..++ .
T Consensus 128 ~~~l~~~L~~~Gi~a~~~~~~~~~-------~~~~----~~~~~~~l~lL~~g-~IpVv~g~~g~~~~~~D~~Aa~lA-~ 194 (281)
T 3nwy_A 128 SLALQDFLEKEGIVTRVQTAITMG-------QVAE----PYLPLRAVRHLEKG-RVVIFGAGMGLPYFSTDTTAAQRA-L 194 (281)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCG-------GGSE----ECCHHHHHHHHHTT-CEEEEESTTSSTTCCHHHHHHHHH-H
T ss_pred HHHHHHHHHHcCCCEEEEeccccc-------cccc----ccchHHHHHHHHcC-CeEEEECCCCCCCCCHHHHHHHHH-H
Confidence 2222456676666432211 1111 11233333344444 44455443 578788776654 2
Q ss_pred HhCCCCCcEEEEeCCCCchH
Q 027287 140 QLGIHDKPVGLLNVDGYYNS 159 (225)
Q Consensus 140 qlg~~~kPiill~~~g~w~~ 159 (225)
.++ .++=+++-+.+|.|+.
T Consensus 195 ~l~-Ad~LiilTDVdGVy~~ 213 (281)
T 3nwy_A 195 EIG-ADVVLMAKAVDGVFAE 213 (281)
T ss_dssp HTT-CSEEEEEESSSSCBCC
T ss_pred HcC-CCEEEEeeccCccccC
Confidence 333 2444555578898863
No 48
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=65.39 E-value=9.3 Score=32.75 Aligned_cols=68 Identities=15% Similarity=0.276 Sum_probs=40.8
Q ss_pred HhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc----CCHH
Q 027287 113 AKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA----PNAK 188 (225)
Q Consensus 113 v~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~----~d~e 188 (225)
...||+|| ..||.||+.|.. .+++|++++.. ..+.. ...+.+.+.|. ..+.-. .|++
T Consensus 284 l~~ad~~v-~~~G~~t~~Ea~---------~~G~P~v~~p~--~~~q~-~~a~~~~~~g~------g~~~~~~~~~~~~~ 344 (391)
T 3tsa_A 284 LRTCELVI-CAGGSGTAFTAT---------RLGIPQLVLPQ--YFDQF-DYARNLAAAGA------GICLPDEQAQSDHE 344 (391)
T ss_dssp GGGCSEEE-ECCCHHHHHHHH---------HTTCCEEECCC--STTHH-HHHHHHHHTTS------EEECCSHHHHTCHH
T ss_pred HhhCCEEE-eCCCHHHHHHHH---------HhCCCEEecCC--cccHH-HHHHHHHHcCC------EEecCcccccCCHH
Confidence 38899987 578889987765 26899999743 22322 22233444342 111111 3688
Q ss_pred HHHHHHHhhcC
Q 027287 189 ELMNKMEEYFP 199 (225)
Q Consensus 189 e~~~~l~~~~~ 199 (225)
++.+.+.+...
T Consensus 345 ~l~~ai~~ll~ 355 (391)
T 3tsa_A 345 QFTDSIATVLG 355 (391)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 88888877654
No 49
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=65.31 E-value=11 Score=32.36 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=26.6
Q ss_pred cceEEE-EeCCCCCCChHHHHHHHHHHHHHHhCCC--eEEEcCCC
Q 027287 19 FNRICV-FCGSSAGKKSTYKDAAIELGKELVARNI--DLVYGGGS 60 (225)
Q Consensus 19 ~~~V~V-fggs~~~~~~~~~~~A~~lG~~LA~~G~--~lv~GGg~ 60 (225)
.++|.| +||+...........++++.. |.+.|+ .||.|||+
T Consensus 26 ~k~iVIKlGGs~l~~~~~~~~~~~~i~~-l~~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 26 GKTLVIKYGGNAMESEELKAGFARDVVL-MKAVGINPVVVHGGGP 69 (300)
T ss_dssp TCEEEEEECCTTTTSSHHHHHHHHHHHH-HHHTTCEEEEEECCCH
T ss_pred CCeEEEEECchhhCCchHHHHHHHHHHH-HHHCCCeEEEEECCcH
Confidence 345555 777776644445667777765 445676 57799976
No 50
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=64.21 E-value=60 Score=26.76 Aligned_cols=126 Identities=20% Similarity=0.269 Sum_probs=61.8
Q ss_pred cceEEE-EeCCCCCC------Ch-HHHHHHHHHHHHHHhCCC--eEEEcCCCc--cH-HHH-------------------
Q 027287 19 FNRICV-FCGSSAGK------KS-TYKDAAIELGKELVARNI--DLVYGGGSV--GL-MGL------------------- 66 (225)
Q Consensus 19 ~~~V~V-fggs~~~~------~~-~~~~~A~~lG~~LA~~G~--~lv~GGg~~--Gl-M~a------------------- 66 (225)
.++|.| ||||.... ++ ...+.|+++.++. +.|+ .||.|||+. |. ...
T Consensus 7 ~k~iViKlGGs~l~~~~~~~~~~~~~~~~a~~I~~l~-~~G~~vVlVhGgG~~~~g~~~~~lg~~~~~~~~~~~~~~~~~ 85 (252)
T 1z9d_A 7 YQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVH-VSGVQIALVIGGGNLWRGEPAADAGMDRVQADYTGMLGTVMN 85 (252)
T ss_dssp CSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHH-TTTCEEEEEECCTTTCCHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEchHHccCCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEECCChHhccchHHHcCCCCCchHHHHHHHHHHH
Confidence 345555 88876653 22 3444455554433 3454 678998764 43 110
Q ss_pred ---HHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecC---CcccHHHHHHHHHHHH
Q 027287 67 ---ISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPG---GYGTLEELLEVITWAQ 140 (225)
Q Consensus 67 ---~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpG---G~GTL~Ei~~a~~~~q 140 (225)
......+.|...+++.+.... .+.+. ....+-..+++.....|+-|+ ..++-|.++..++ ..
T Consensus 86 ~~ll~~al~~~G~~~~~~~~~~~~-------~~~~~----~~~~~~~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA-~~ 153 (252)
T 1z9d_A 86 ALVMADSLQHYGVDTRVQTAIPMQ-------NVAEP----YIRGRALRHLEKNRIVVFGAGIGSPYFSTDTTAALRA-AE 153 (252)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCBT-------TTBEE----CCHHHHHHHHHTTCEEEEESTTSCTTCCHHHHHHHHH-HH
T ss_pred HHHHHHHHHHcCCCeEEEeccccc-------cccCc----chHHHHHHHHhCCCEEEEeCCcCCCCCChHHHHHHHH-Hh
Confidence 122222346677777553211 01111 112222334444444444433 2577777776654 23
Q ss_pred hCCCCCcEEEE-eCCCCch
Q 027287 141 LGIHDKPVGLL-NVDGYYN 158 (225)
Q Consensus 141 lg~~~kPiill-~~~g~w~ 158 (225)
++ ..+=+++- +.+|.|+
T Consensus 154 l~-Ad~LiilT~DVdGvy~ 171 (252)
T 1z9d_A 154 IE-ADAILMAKNGVDGVYN 171 (252)
T ss_dssp TT-CSEEEEEESSCCSCBS
T ss_pred cC-CCEEEEecCCCCeeeC
Confidence 33 34556666 7788775
No 51
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=63.44 E-value=14 Score=31.13 Aligned_cols=59 Identities=22% Similarity=0.165 Sum_probs=38.2
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe------------------------------EEEcCCCccHHHHHH
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNID------------------------------LVYGGGSVGLMGLIS 68 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~------------------------------lv~GGg~~GlM~a~a 68 (225)
|++|+|+.-.. ++...+.+.++.+.|.++|+. ||.-|| .|-+-.++
T Consensus 5 mkki~ii~np~---~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GG-DGT~l~a~ 80 (292)
T 2an1_A 5 FKCIGIVGHPR---HPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGG-DGNMLGAA 80 (292)
T ss_dssp CCEEEEECC----------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSC-HHHHHHHH
T ss_pred CcEEEEEEcCC---CHHHHHHHHHHHHHHHHCCCEEEEecchhhhcccccccccchhhcccCCCEEEEEcC-cHHHHHHH
Confidence 67899985322 233345566777777776653 344566 59999999
Q ss_pred HHHHhcCCeEEEE
Q 027287 69 QAVYDGGRHVIGV 81 (225)
Q Consensus 69 ~gA~~aGG~viGI 81 (225)
++....+-.++||
T Consensus 81 ~~~~~~~~P~lGI 93 (292)
T 2an1_A 81 RTLARYDINVIGI 93 (292)
T ss_dssp HHHTTSSCEEEEB
T ss_pred HHhhcCCCCEEEE
Confidence 8887777788998
No 52
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=63.12 E-value=47 Score=28.67 Aligned_cols=122 Identities=12% Similarity=0.103 Sum_probs=57.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEV 99 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~ 99 (225)
++|.+.+| .++ -+.--|..|++.|.++||.|.+=|...|+ ++ +-+-++|-....| |..-.+.....+.+...
T Consensus 3 ~~i~i~~G-GTg---GHi~palala~~L~~~g~~V~~vg~~~g~-e~--~~v~~~g~~~~~i-~~~~~~~~~~~~~~~~~ 74 (365)
T 3s2u_A 3 GNVLIMAG-GTG---GHVFPALACAREFQARGYAVHWLGTPRGI-EN--DLVPKAGLPLHLI-QVSGLRGKGLKSLVKAP 74 (365)
T ss_dssp CEEEEECC-SSH---HHHHHHHHHHHHHHHTTCEEEEEECSSST-HH--HHTGGGTCCEEEC-C--------------CH
T ss_pred CcEEEEcC-CCH---HHHHHHHHHHHHHHhCCCEEEEEECCchH-hh--chhhhcCCcEEEE-ECCCcCCCCHHHHHHHH
Confidence 45666655 222 23445778999999999999864444464 31 2222344443333 32111110000000000
Q ss_pred -eecCC-HHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCC
Q 027287 100 -KPVAD-MHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGY 156 (225)
Q Consensus 100 -~~~~~-m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~ 156 (225)
.+... ...|+.+--..-|++|...|-..-.- ...++ ..++|+++...+-+
T Consensus 75 ~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~-~laA~------~~~iP~vihe~n~~ 126 (365)
T 3s2u_A 75 LELLKSLFQALRVIRQLRPVCVLGLGGYVTGPG-GLAAR------LNGVPLVIHEQNAV 126 (365)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHH-HHHHH------HTTCCEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHH-HHHHH------HcCCCEEEEecchh
Confidence 00111 13454444456788887766543322 22222 25799999866533
No 53
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=60.40 E-value=40 Score=25.16 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=37.4
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCC-CCCCceEeecC--CHHHHHHHHHhhCCEEEEecCCcc
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREIT-GETVGEVKPVA--DMHQRKAEMAKHSDAFIALPGGYG 127 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~-~~~~~~~~~~~--~m~~Rk~~mv~~sDa~IvlpGG~G 127 (225)
...+|.|+|..|.. +++...+.|-.|+.+-.+........ .... ..+..+ +...-+..-+..+|++|+..+...
T Consensus 20 ~~v~IiG~G~iG~~--la~~L~~~g~~V~vid~~~~~~~~~~~~~g~-~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 20 KYIVIFGCGRLGSL--IANLASSSGHSVVVVDKNEYAFHRLNSEFSG-FTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCEEEEEESCGGGGGGSCTTCCS-EEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CcEEEECCCHHHHH--HHHHHHhCCCeEEEEECCHHHHHHHHhcCCC-cEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 45667787654443 45555667778888754322111111 1111 222222 221111111467899999887644
Q ss_pred cH
Q 027287 128 TL 129 (225)
Q Consensus 128 TL 129 (225)
+.
T Consensus 97 ~~ 98 (155)
T 2g1u_A 97 TN 98 (155)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 54
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=59.87 E-value=42 Score=28.47 Aligned_cols=31 Identities=29% Similarity=0.395 Sum_probs=23.3
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEe
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 152 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~ 152 (225)
+...+|+| +-.||.||+.|... +++|++++-
T Consensus 301 lL~~~~~~-v~h~G~~s~~Eal~---------~GvP~v~~P 331 (400)
T 4amg_A 301 LLETCDAI-IHHGGSGTLLTALA---------AGVPQCVIP 331 (400)
T ss_dssp HHTTCSEE-EECCCHHHHHHHHH---------HTCCEEECC
T ss_pred Hhhhhhhe-eccCCccHHHHHHH---------hCCCEEEec
Confidence 45778875 56899999887751 479999873
No 55
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=59.39 E-value=45 Score=29.96 Aligned_cols=137 Identities=13% Similarity=0.020 Sum_probs=65.8
Q ss_pred HHHHHHh---CCCeEEEcCCCccH-----HHHHHHHHHhcCCeEEEEeCCcc---ccCCCCCCCCceEeecCCHHHHHHH
Q 027287 43 LGKELVA---RNIDLVYGGGSVGL-----MGLISQAVYDGGRHVIGVIPKTL---MPREITGETVGEVKPVADMHQRKAE 111 (225)
Q Consensus 43 lG~~LA~---~G~~lv~GGg~~Gl-----M~a~a~gA~~aGG~viGIiP~~~---~~~e~~~~~~~~~~~~~~m~~Rk~~ 111 (225)
+-++|.. +...+|++|+. |. +..++++..+.+-+++=++.... .+.+.....-....+....... .
T Consensus 261 ~~~wl~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~-~- 337 (456)
T 2c1x_A 261 CLQWLKERKPTSVVYISFGTV-TTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA-E- 337 (456)
T ss_dssp HHHHHHTSCTTCEEEEECCSS-CCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH-H-
T ss_pred HHHHHhcCCCcceEEEecCcc-ccCCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH-H-
Confidence 4455543 45667777763 42 44555555555666555543221 1111000000123333333332 3
Q ss_pred HHhhCC-EEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHc-CCCCccccCcEEEcCCHHH
Q 027287 112 MAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEE-GFISPNARHIIVSAPNAKE 189 (225)
Q Consensus 112 mv~~sD-a~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~-gfi~~~~~~~i~~~~d~ee 189 (225)
+..++. ..++--||.||..|.. + +++|++++-. +.++.. ..+.+.+. |.--.-... .-+.++
T Consensus 338 vL~h~~~~~fvth~G~~S~~Eal--~-------~GvP~i~~P~--~~dQ~~-Na~~l~~~~g~g~~l~~~----~~~~~~ 401 (456)
T 2c1x_A 338 VLAHEAVGAFVTHCGWNSLWESV--A-------GGVPLICRPF--FGDQRL-NGRMVEDVLEIGVRIEGG----VFTKSG 401 (456)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHH--H-------HTCCEEECCC--STTHHH-HHHHHHHTSCCEEECGGG----SCCHHH
T ss_pred HhcCCcCCEEEecCCcchHHHHH--H-------hCceEEecCC--hhhHHH-HHHHHHHHhCeEEEecCC----CcCHHH
Confidence 334323 3556689999998886 2 4799998742 455543 34445554 432100000 115666
Q ss_pred HHHHHHhhc
Q 027287 190 LMNKMEEYF 198 (225)
Q Consensus 190 ~~~~l~~~~ 198 (225)
+.+.+++..
T Consensus 402 l~~~i~~ll 410 (456)
T 2c1x_A 402 LMSCFDQIL 410 (456)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665544
No 56
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=59.05 E-value=13 Score=31.54 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=30.9
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCcc
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVG 62 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~G 62 (225)
.+++|+|.+|......+.-...++++.+.|.+.||.++.=.-..+
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~ 56 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER 56 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 346788877755443343356789999999999999875443334
No 57
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=58.81 E-value=45 Score=28.52 Aligned_cols=68 Identities=16% Similarity=0.145 Sum_probs=38.9
Q ss_pred EEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCH--HHHHHHHHhhCCEEEEecCCc
Q 027287 54 LVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADM--HQRKAEMAKHSDAFIALPGGY 126 (225)
Q Consensus 54 lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m--~~Rk~~mv~~sDa~IvlpGG~ 126 (225)
++.|||..|.| ++..|++.|-+|+.+-++...+ .....++.+..+.. ......+.+..|+++...|..
T Consensus 5 ~ilGgg~~g~~--~~~~Ak~~G~~vv~vd~~~~~~---~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 74 (363)
T 4ffl_A 5 CLVGGKLQGFE--AAYLSKKAGMKVVLVDKNPQAL---IRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNENL 74 (363)
T ss_dssp EEECCSHHHHH--HHHHHHHTTCEEEEEESCTTCT---TTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCCH
T ss_pred EEECCCHHHHH--HHHHHHHCCCEEEEEeCCCCCh---hHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCCh
Confidence 45677655665 5677889999999885433221 11122333433322 334444556789887766543
No 58
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=58.58 E-value=75 Score=26.02 Aligned_cols=125 Identities=15% Similarity=0.298 Sum_probs=61.6
Q ss_pred cceEEE-EeCCCCCC------C-hHHHHHHHHHHHHHHhCCC--eEEEcCCCc--cH-HHH-------------------
Q 027287 19 FNRICV-FCGSSAGK------K-STYKDAAIELGKELVARNI--DLVYGGGSV--GL-MGL------------------- 66 (225)
Q Consensus 19 ~~~V~V-fggs~~~~------~-~~~~~~A~~lG~~LA~~G~--~lv~GGg~~--Gl-M~a------------------- 66 (225)
+++|.| ||||.... + +...+.|+++..+. +.|+ .||.|||+. |. +..
T Consensus 8 ~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~-~~G~~vVlVhGgG~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 86 (247)
T 2a1f_A 8 YKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELV-EMGVEVSVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMN 86 (247)
T ss_dssp CSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHH-TTTCEEEEEECCTTTCCCHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHH-HCCCeEEEEECCChHhcchhHHHcCCCCCcHHHHHHHHHHHH
Confidence 455555 88876652 2 23444455554432 4565 578998764 43 111
Q ss_pred ---HHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCC----cccHHHHHHHHHHH
Q 027287 67 ---ISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGG----YGTLEELLEVITWA 139 (225)
Q Consensus 67 ---~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG----~GTL~Ei~~a~~~~ 139 (225)
......+.|...+++.+.... .+.+.. ...+-..+++.. .+++++|+ +++-|.++..++ .
T Consensus 87 ~~ll~~~l~~~G~~~~~~~~~~~~-------~~~~~~----~~~~~~~ll~~g-~ipVi~~~~g~~~~~~D~~Aa~lA-~ 153 (247)
T 2a1f_A 87 GLAMRDSLFRADVNAKLMSAFQLN-------GICDTY----NWSEAIKMLREK-RVVIFSAGTGNPFFTTDSTACLRG-I 153 (247)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCT-------TTSEEC----CHHHHHHHHHTT-CEEEEESTTSCSSCCHHHHHHHHH-H
T ss_pred HHHHHHHHHHcCCCeEEecccccc-------cccchh----hHHHHHHHHhCC-CEEEEeCCcCCCCCCcHHHHHHHH-H
Confidence 122223456677787553321 111111 122222344444 44445433 467777766554 2
Q ss_pred HhCCCCCcEEEEeCCCCch
Q 027287 140 QLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 140 qlg~~~kPiill~~~g~w~ 158 (225)
.++ ..+=+++-+.+|.|+
T Consensus 154 ~l~-Ad~liilTDVdGvy~ 171 (247)
T 2a1f_A 154 EIE-ADVVLKATKVDGVYD 171 (247)
T ss_dssp HTT-CSEEEEEESSSSCBC
T ss_pred hCC-CCEEEEEeCCCcccC
Confidence 333 345555667888885
No 59
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=58.58 E-value=22 Score=30.09 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=39.6
Q ss_pred HHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCH
Q 027287 108 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNA 187 (225)
Q Consensus 108 Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ 187 (225)
....++..||++| +|. |++ +.|+++ .++|+|..+..+-...+ ++.|. -+.+-.|+
T Consensus 267 ~~~~~~~~ad~~v-~~S--~g~--~lEA~a------~G~PvI~~~~~~~~~~~-------~~~g~-------g~lv~~d~ 321 (376)
T 1v4v_A 267 SMAALMRASLLLV-TDS--GGL--QEEGAA------LGVPVVVLRNVTERPEG-------LKAGI-------LKLAGTDP 321 (376)
T ss_dssp HHHHHHHTEEEEE-ESC--HHH--HHHHHH------TTCCEEECSSSCSCHHH-------HHHTS-------EEECCSCH
T ss_pred HHHHHHHhCcEEE-ECC--cCH--HHHHHH------cCCCEEeccCCCcchhh-------hcCCc-------eEECCCCH
Confidence 3455678999885 454 555 556664 68999986422223332 22221 12222689
Q ss_pred HHHHHHHHhhcC
Q 027287 188 KELMNKMEEYFP 199 (225)
Q Consensus 188 ee~~~~l~~~~~ 199 (225)
+++.+.|.+...
T Consensus 322 ~~la~~i~~ll~ 333 (376)
T 1v4v_A 322 EGVYRVVKGLLE 333 (376)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 988888877654
No 60
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.33 E-value=56 Score=28.01 Aligned_cols=83 Identities=12% Similarity=0.088 Sum_probs=41.7
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCC-CCCceEeecC--C-HHHHHHHHH---hhCCEEEEe
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITG-ETVGEVKPVA--D-MHQRKAEMA---KHSDAFIAL 122 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~-~~~~~~~~~~--~-m~~Rk~~mv---~~sDa~Ivl 122 (225)
...+|+|+|..|++ +..-|+..|. +|+++-.+... .+... -..+.++... + -...+.+.- ...|++|-.
T Consensus 173 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~~-~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 173 HKVLVCGAGPIGMV--TLLVAKAMGAAQVVVTDLSATR-LSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEEESCHHH-HHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHHH-HHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 45677887655554 4455667787 88888543211 01100 1112233222 1 111111111 247888888
Q ss_pred cCCcccHHHHHHHH
Q 027287 123 PGGYGTLEELLEVI 136 (225)
Q Consensus 123 pGG~GTL~Ei~~a~ 136 (225)
.|+.-++++.+..+
T Consensus 250 ~g~~~~~~~~~~~l 263 (356)
T 1pl8_A 250 TGAEASIQAGIYAT 263 (356)
T ss_dssp SCCHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHh
Confidence 88766666665444
No 61
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=57.30 E-value=6.1 Score=35.04 Aligned_cols=45 Identities=16% Similarity=0.274 Sum_probs=23.1
Q ss_pred cCCcceEEE-EeCCCCCCCh-HHHHHHHHHHHHHH---hCCC--eEEEcCCC
Q 027287 16 QSKFNRICV-FCGSSAGKKS-TYKDAAIELGKELV---ARNI--DLVYGGGS 60 (225)
Q Consensus 16 ~~~~~~V~V-fggs~~~~~~-~~~~~A~~lG~~LA---~~G~--~lv~GGg~ 60 (225)
...|++|.| +||+..+.++ ...+..+.+++.|| +.|+ .||.||||
T Consensus 21 ~K~MkRIVIklGGnAL~~~~~~q~~~~~~~a~~Ia~L~~~G~~vVvVHGgGP 72 (332)
T 4axs_A 21 DKHMSRIVIALGGNALGDNPSQQKELVKIPAAKIAALIQEGHEVIVGHGNGP 72 (332)
T ss_dssp -----CEEEEECGGGGCSSHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred ccCcceEEEEEChhhcCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 345566777 7777776543 22334444455444 3455 45589987
No 62
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=56.48 E-value=5.8 Score=28.99 Aligned_cols=50 Identities=12% Similarity=0.270 Sum_probs=35.2
Q ss_pred CCCCchHHHHHHHHHHHcCCCCccccCcEEE-----cCCHHHHHHHHHhhcCCcccccc
Q 027287 153 VDGYYNSLLTFIDKAVEEGFISPNARHIIVS-----APNAKELMNKMEEYFPQHERVAS 206 (225)
Q Consensus 153 ~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~-----~~d~ee~~~~l~~~~~~~~~~~~ 206 (225)
++.+.+.++..+.+.++ .+.-.++|++ -+||+++++.+++|++....+-+
T Consensus 29 ~E~e~d~ll~~fe~ite----HP~gSDLIfyP~~~~e~SPEgIv~~IKeWRa~nG~pgF 83 (94)
T 3u43_A 29 TEEDDNKLVREFERLTE----HPDGSDLIYYPRDDREDSPEGIVKEIKEWRAANGKSGF 83 (94)
T ss_dssp SHHHHHHHHHHHHHHHC----CTTTTHHHHSCCTTSCSSHHHHHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHHHHhCC----CCCccCeeeeCCCCCCCCHHHHHHHHHHHHHHcCCccc
Confidence 34567777777776653 3555688877 47899999999999876544433
No 63
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=56.44 E-value=16 Score=27.31 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=25.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
++|.|+.+|..++.. +.|+++++.|.+.|+.+.
T Consensus 2 ~ki~I~Y~S~tGnT~---~~A~~ia~~l~~~g~~v~ 34 (147)
T 2hna_A 2 ADITLISGSTLGGAE---YVAEHLAEKLEEAGFTTE 34 (147)
T ss_dssp CSEEEECCTTSCCCH---HHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEEECCchHHH---HHHHHHHHHHHHCCCceE
Confidence 467787788888765 457889999988887654
No 64
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=55.46 E-value=89 Score=25.91 Aligned_cols=71 Identities=13% Similarity=0.122 Sum_probs=39.3
Q ss_pred HHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCC--HH
Q 027287 111 EMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPN--AK 188 (225)
Q Consensus 111 ~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d--~e 188 (225)
.++..||++|.- +|.+|+-|.+ . .++|+|..+..|.-++-....+.+.+.|. ..++-.+| ++
T Consensus 250 ~~~~~ad~~v~~-sg~~~~~EAm---a------~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~------g~~~~~~d~~~~ 313 (364)
T 1f0k_A 250 AAYAWADVVVCR-SGALTVSEIA---A------AGLPALFVPFQHKDRQQYWNALPLEKAGA------AKIIEQPQLSVD 313 (364)
T ss_dssp HHHHHCSEEEEC-CCHHHHHHHH---H------HTCCEEECCCCCTTCHHHHHHHHHHHTTS------EEECCGGGCCHH
T ss_pred HHHHhCCEEEEC-CchHHHHHHH---H------hCCCEEEeeCCCCchhHHHHHHHHHhCCc------EEEeccccCCHH
Confidence 466889987765 4556666554 2 47999998776542211111223443331 12222334 77
Q ss_pred HHHHHHHhh
Q 027287 189 ELMNKMEEY 197 (225)
Q Consensus 189 e~~~~l~~~ 197 (225)
++.+.|.+.
T Consensus 314 ~la~~i~~l 322 (364)
T 1f0k_A 314 AVANTLAGW 322 (364)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 787777655
No 65
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=55.08 E-value=30 Score=29.10 Aligned_cols=56 Identities=9% Similarity=0.089 Sum_probs=40.7
Q ss_pred eEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe--------EEEcCCCccHHHHHHHHHHhc--CCeEEEE
Q 027287 21 RICVFCGSSAGKKSTYKDAAIELGKELVARNID--------LVYGGGSVGLMGLISQAVYDG--GRHVIGV 81 (225)
Q Consensus 21 ~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~--------lv~GGg~~GlM~a~a~gA~~a--GG~viGI 81 (225)
+|+++.- . ++...+.+.++.+.|.++|+. ||.-|| .|.+-.+++..... +-.++||
T Consensus 2 ki~ii~n--~--~~~~~~~~~~l~~~l~~~g~~v~~~~~D~vv~lGG-DGT~l~aa~~~~~~~~~~PilGI 67 (272)
T 2i2c_A 2 KYMITSK--G--DEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGG-DGTFLSAFHQYEERLDEIAFIGI 67 (272)
T ss_dssp EEEEEEC--C--SHHHHHHHHHHHHHHTTSSCEECSSSCSEEEEEES-HHHHHHHHHHTGGGTTTCEEEEE
T ss_pred EEEEEEC--C--CHHHHHHHHHHHHHHHHCCCEeCCCCCCEEEEEcC-cHHHHHHHHHHhhcCCCCCEEEE
Confidence 5788853 2 345567788899999888753 344556 59999999887765 7788998
No 66
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=54.98 E-value=49 Score=28.17 Aligned_cols=140 Identities=14% Similarity=0.089 Sum_probs=66.5
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCC-CCCCceEeec--CCHHHHHHHHHhhCCEEEEecCCcc
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREIT-GETVGEVKPV--ADMHQRKAEMAKHSDAFIALPGGYG 127 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~-~~~~~~~~~~--~~m~~Rk~~mv~~sDa~IvlpGG~G 127 (225)
...+|+|+|..|+ +++.-|+..|.+|+++-.+... .+.. .-..+..+.. .++.++-..+....|++|-..|+.-
T Consensus 166 ~~VlV~GaG~vG~--~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~ 242 (339)
T 1rjw_A 166 EWVAIYGIGGLGH--VAVQYAKAMGLNVVAVDIGDEK-LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP 242 (339)
T ss_dssp CEEEEECCSTTHH--HHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCEEEEEeCCHHH-HHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH
Confidence 4577899865454 4556677788899888533210 0000 0011122211 2333222111245677777777655
Q ss_pred cHHHHHHHHHH----HHhCCCCCcE------------EEEeCCC-CchHHHHHHHHHHHcCCCCccccCcEEEcCCHHHH
Q 027287 128 TLEELLEVITW----AQLGIHDKPV------------GLLNVDG-YYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKEL 190 (225)
Q Consensus 128 TL~Ei~~a~~~----~qlg~~~kPi------------ill~~~g-~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~ 190 (225)
++++....+.- ..+|....++ -+.+... .++.+.+ +-+++++|-++.. . ..+-.++..++
T Consensus 243 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~-~~~l~~~g~l~~~-~-~~~~l~~~~~A 319 (339)
T 1rjw_A 243 AFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQE-ALQFAAEGKVKTI-I-EVQPLEKINEV 319 (339)
T ss_dssp HHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHH-HHHHHHTTSCCCC-E-EEEEGGGHHHH
T ss_pred HHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHH-HHHHHHcCCCCcc-E-EEEcHHHHHHH
Confidence 66555443310 0011111111 1111111 1233333 3345677777664 2 35667788888
Q ss_pred HHHHHh
Q 027287 191 MNKMEE 196 (225)
Q Consensus 191 ~~~l~~ 196 (225)
++.+.+
T Consensus 320 ~~~~~~ 325 (339)
T 1rjw_A 320 FDRMLK 325 (339)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 887765
No 67
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=54.63 E-value=17 Score=26.98 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=22.7
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDL 54 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 54 (225)
|++|.|+.+|..++. .+.|+++++.|.+.|+.+
T Consensus 1 M~ki~I~y~S~tGnT---~~~A~~ia~~l~~~g~~v 33 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNT---ESIAQKLEELIAAGGHEV 33 (148)
T ss_dssp -CEEEEEEECSSSHH---HHHHHHHHHHHHTTTCEE
T ss_pred CCeEEEEEECCCchH---HHHHHHHHHHHHhCCCeE
Confidence 356777777877642 357888888887777654
No 68
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=53.73 E-value=14 Score=30.71 Aligned_cols=53 Identities=28% Similarity=0.344 Sum_probs=34.6
Q ss_pred HHHh-hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC-CCchHHHHHHHHHHHcCCC
Q 027287 111 EMAK-HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-GYYNSLLTFIDKAVEEGFI 173 (225)
Q Consensus 111 ~mv~-~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~-g~w~~l~~~l~~~~~~gfi 173 (225)
.++. .||++|- -||.||+.|+. ..++|.|++-.. -..++=....+.+.+.|..
T Consensus 127 ~~l~~~AdlvIs-haGagTv~Eal---------~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 127 SIIRDYSDLVIS-HAGTGSILDSL---------RLNKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp HHHHHHCSCEEE-SSCHHHHHHHH---------HTTCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred HHHHhcCCEEEE-CCcHHHHHHHH---------HhCCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 3456 8888665 59999999886 257999988432 1234444445566677753
No 69
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=53.45 E-value=13 Score=27.87 Aligned_cols=34 Identities=6% Similarity=0.188 Sum_probs=23.2
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
+++++|+|+|.|..... .+..+.+.|-+.||.|.
T Consensus 2 ~~p~siAVVGaS~~~~~-----~g~~v~~~L~~~g~~V~ 35 (122)
T 3ff4_A 2 NAMKKTLILGATPETNR-----YAYLAAERLKSHGHEFI 35 (122)
T ss_dssp CCCCCEEEETCCSCTTS-----HHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEEccCCCCCC-----HHHHHHHHHHHCCCeEE
Confidence 46789999976665432 24567777777788655
No 70
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=51.22 E-value=1.2e+02 Score=26.07 Aligned_cols=143 Identities=12% Similarity=0.077 Sum_probs=67.5
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCC-CCCceEeec----CCHHHHHHHHH-hhCCEEEEec
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITG-ETVGEVKPV----ADMHQRKAEMA-KHSDAFIALP 123 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~-~~~~~~~~~----~~m~~Rk~~mv-~~sDa~Ivlp 123 (225)
...+|+|+|+.|++ +..-|+..|. +|+++-.+... .+... -..+.++.. .++.++-..+. ...|++|-..
T Consensus 197 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~~-~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~ 273 (376)
T 1e3i_A 197 STCAVFGLGCVGLS--AIIGCKIAGASRIIAIDINGEK-FPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 273 (376)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCGGG-HHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHHH-HHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECC
Confidence 45677887655554 4455667787 78888433211 11110 011222221 23433322222 2468888888
Q ss_pred CCcccHHHHHHHHHHH-----HhCCCCCcEE-----------EEeCC-CCc--hHHHHHHHHHHHcCCCCccc-cCcEEE
Q 027287 124 GGYGTLEELLEVITWA-----QLGIHDKPVG-----------LLNVD-GYY--NSLLTFIDKAVEEGFISPNA-RHIIVS 183 (225)
Q Consensus 124 GG~GTL~Ei~~a~~~~-----qlg~~~kPii-----------ll~~~-g~w--~~l~~~l~~~~~~gfi~~~~-~~~i~~ 183 (225)
|+.-++++.+..+.-. .+|....++- +.+.. +.| ...+..+-.++++|-++.+. ....+-
T Consensus 274 G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~ 353 (376)
T 1e3i_A 274 GTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALP 353 (376)
T ss_dssp CCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEE
T ss_pred CCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccCeEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeec
Confidence 8766766665444210 0011111111 11110 001 12222333456777776432 244566
Q ss_pred cCCHHHHHHHHHh
Q 027287 184 APNAKELMNKMEE 196 (225)
Q Consensus 184 ~~d~ee~~~~l~~ 196 (225)
.++..++++.+++
T Consensus 354 l~~~~~A~~~~~~ 366 (376)
T 1e3i_A 354 FESINDAIDLMKE 366 (376)
T ss_dssp GGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 7788888887765
No 71
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=50.65 E-value=77 Score=23.76 Aligned_cols=70 Identities=13% Similarity=0.270 Sum_probs=44.0
Q ss_pred HHHHHHhhCCEEEEec--CCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcC
Q 027287 108 RKAEMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAP 185 (225)
Q Consensus 108 Rk~~mv~~sDa~Ivlp--GG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~ 185 (225)
....++..||++|..+ .|+|+- ++|++. .++|||..+.. ...+ + +.......++ .+
T Consensus 90 e~~~~~~~adi~v~ps~~e~~~~~--~~Eama------~G~PvI~~~~~----~~~e----~-----i~~~~~g~~~-~~ 147 (177)
T 2f9f_A 90 ELIDLYSRCKGLLCTAKDEDFGLT--PIEAMA------SGKPVIAVNEG----GFKE----T-----VINEKTGYLV-NA 147 (177)
T ss_dssp HHHHHHHHCSEEEECCSSCCSCHH--HHHHHH------TTCCEEEESSH----HHHH----H-----CCBTTTEEEE-CS
T ss_pred HHHHHHHhCCEEEeCCCcCCCChH--HHHHHH------cCCcEEEeCCC----CHHH----H-----hcCCCccEEe-CC
Confidence 3456778999988744 355522 355553 68999987642 2222 2 2222334455 89
Q ss_pred CHHHHHHHHHhhcC
Q 027287 186 NAKELMNKMEEYFP 199 (225)
Q Consensus 186 d~ee~~~~l~~~~~ 199 (225)
|++++.+.|.+...
T Consensus 148 d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 148 DVNEIIDAMKKVSK 161 (177)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988763
No 72
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=50.39 E-value=78 Score=27.25 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=65.3
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCC-C-CCCCceEeecCCHHHHHHHHHhhCCEEEEecCCccc
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREI-T-GETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGT 128 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~-~-~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GT 128 (225)
...+|+|+|..|+ ++..-|...|.+|+++-..... .+. . .-..+.++...+- +.-..+....|++|-.-|+.-+
T Consensus 189 ~~VlV~GaG~vG~--~~~q~a~~~Ga~Vi~~~~~~~~-~~~~~~~lGa~~v~~~~~~-~~~~~~~~~~D~vid~~g~~~~ 264 (366)
T 1yqd_A 189 KHIGIVGLGGLGH--VAVKFAKAFGSKVTVISTSPSK-KEEALKNFGADSFLVSRDQ-EQMQAAAGTLDGIIDTVSAVHP 264 (366)
T ss_dssp CEEEEECCSHHHH--HHHHHHHHTTCEEEEEESCGGG-HHHHHHTSCCSEEEETTCH-HHHHHTTTCEEEEEECCSSCCC
T ss_pred CEEEEECCCHHHH--HHHHHHHHCCCEEEEEeCCHHH-HHHHHHhcCCceEEeccCH-HHHHHhhCCCCEEEECCCcHHH
Confidence 3567788764444 4556677788888888543221 111 0 1112223333332 1111112346777777777656
Q ss_pred HHHHHHHHHH----HHhCCCCCc------------EEEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHH
Q 027287 129 LEELLEVITW----AQLGIHDKP------------VGLLNVDGY-YNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELM 191 (225)
Q Consensus 129 L~Ei~~a~~~----~qlg~~~kP------------iill~~~g~-w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~ 191 (225)
+++.+..+.- ..+|....| +-+.....+ .+.+.+.+ .++.+|-++... ..+-.++..+++
T Consensus 265 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~-~l~~~g~l~~~~--~~~~l~~~~~A~ 341 (366)
T 1yqd_A 265 LLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMI-DFAAKHNITADI--EVISTDYLNTAM 341 (366)
T ss_dssp SHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHH-HHHHHTTCCCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHH-HHHHcCCCCCce--EEEcHHHHHHHH
Confidence 6665544310 001111112 112221111 12233322 345567776543 355677788888
Q ss_pred HHHHh
Q 027287 192 NKMEE 196 (225)
Q Consensus 192 ~~l~~ 196 (225)
+.+.+
T Consensus 342 ~~~~~ 346 (366)
T 1yqd_A 342 ERLAK 346 (366)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 88765
No 73
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=50.15 E-value=30 Score=27.80 Aligned_cols=67 Identities=13% Similarity=0.102 Sum_probs=45.5
Q ss_pred HhhhcccCCcceEEEEeCCCCCCChHH----------------HHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHh
Q 027287 10 EMEMNNQSKFNRICVFCGSSAGKKSTY----------------KDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYD 73 (225)
Q Consensus 10 ~~~~~~~~~~~~V~Vfggs~~~~~~~~----------------~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~ 73 (225)
..+....+...+|+|++..+...+-.. .+.+++.-+.|.++|+.+|-||+. +++-|.+
T Consensus 85 ~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~------~~~~A~~ 158 (196)
T 2q5c_A 85 RAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKT------VTDEAIK 158 (196)
T ss_dssp HHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHH------HHHHHHH
T ss_pred HHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHH------HHHHHHH
Confidence 344555556678999977666543221 134567778888899999999753 4677888
Q ss_pred cCCeEEEEe
Q 027287 74 GGRHVIGVI 82 (225)
Q Consensus 74 aGG~viGIi 82 (225)
.|-..+=+.
T Consensus 159 ~Gl~~vli~ 167 (196)
T 2q5c_A 159 QGLYGETIN 167 (196)
T ss_dssp TTCEEEECC
T ss_pred cCCcEEEEe
Confidence 888765553
No 74
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=49.68 E-value=23 Score=30.26 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=25.7
Q ss_pred HHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhh
Q 027287 163 FIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEY 197 (225)
Q Consensus 163 ~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~ 197 (225)
.+-.++++|-++.......+-.++.+++++.+.+-
T Consensus 286 ~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~ 320 (340)
T 3gms_A 286 HLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSA 320 (340)
T ss_dssp HHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCT
T ss_pred HHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhc
Confidence 33456788888765455677788999999988764
No 75
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=48.96 E-value=36 Score=29.80 Aligned_cols=39 Identities=26% Similarity=0.368 Sum_probs=30.0
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
..+..|+|||..| .-||+|-..++.+.- ..+|||||-+.
T Consensus 76 ~~~~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVlTGA 114 (326)
T 1nns_A 76 DCDKTDGFVITHG-TDTMEETAYFLDLTV--KCDKPVVMVGA 114 (326)
T ss_dssp HGGGCSEEEEECC-SSSHHHHHHHHHHHC--CCCSCEEEECC
T ss_pred HhhcCCcEEEEcC-chhHHHHHHHHHHhc--CCCCCEEEeCC
Confidence 3344599999975 799999999987643 35899999764
No 76
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=47.87 E-value=65 Score=26.57 Aligned_cols=55 Identities=5% Similarity=0.100 Sum_probs=27.8
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.++|-|.|+++. ..+.+++.|+++|+.|+.-+-...--+.+.+...+.|+.+..+
T Consensus 32 gk~~lVTGas~G--------IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 86 (276)
T 3r1i_A 32 GKRALITGASTG--------IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPI 86 (276)
T ss_dssp TCEEEEESTTSH--------HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEeCCCCH--------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Confidence 345666654431 2345667777777777654433233333333333445544444
No 77
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=47.78 E-value=55 Score=27.72 Aligned_cols=83 Identities=10% Similarity=0.024 Sum_probs=41.3
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCC-CCCceEeec--CCHHHHHHHHHhhCCEEEEecCCcc
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITG-ETVGEVKPV--ADMHQRKAEMAKHSDAFIALPGGYG 127 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~-~~~~~~~~~--~~m~~Rk~~mv~~sDa~IvlpGG~G 127 (225)
...+|+|+|..|++ +..-|+..|.+|+++-.+... .+... -..+.++.. .++.++-.......|.+|...|+-.
T Consensus 168 ~~VlV~GaG~vG~~--a~qla~~~Ga~Vi~~~~~~~~-~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 168 QWVVISGIGGLGHV--AVQYARAMGLRVAAVDIDDAK-LNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp SEEEEECCSTTHHH--HHHHHHHTTCEEEEEESCHHH-HHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCeEEEEeCCHHH-HHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 45667887655554 456677788899998543211 11100 111222222 2333222212224566766666666
Q ss_pred cHHHHHHHH
Q 027287 128 TLEELLEVI 136 (225)
Q Consensus 128 TL~Ei~~a~ 136 (225)
++++.+..+
T Consensus 245 ~~~~~~~~l 253 (340)
T 3s2e_A 245 AFSQAIGMV 253 (340)
T ss_dssp HHHHHHHHE
T ss_pred HHHHHHHHh
Confidence 666655443
No 78
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=47.29 E-value=46 Score=30.15 Aligned_cols=72 Identities=8% Similarity=0.064 Sum_probs=42.0
Q ss_pred HHHhhCCE-EEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHH-HcCC---CCccccCcEEEcC
Q 027287 111 EMAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAV-EEGF---ISPNARHIIVSAP 185 (225)
Q Consensus 111 ~mv~~sDa-~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~-~~gf---i~~~~~~~i~~~~ 185 (225)
.++.++++ .++--||.||..|.. + +++|++++-. +.|+... .+.++ +.|. ++..... .-
T Consensus 351 ~vL~h~~v~~fvtHgG~~S~~Eal--~-------~GvP~i~~P~--~~DQ~~n-a~~l~~~~G~g~~l~~~~~~----~~ 414 (480)
T 2vch_A 351 QVLAHPSTGGFLTHCGWNSTLESV--V-------SGIPLIAWPL--YAEQKMN-AVLLSEDIRAALRPRAGDDG----LV 414 (480)
T ss_dssp HHHHSTTEEEEEECCCHHHHHHHH--H-------HTCCEEECCC--STTHHHH-HHHHHHTTCCEECCCCCTTS----CC
T ss_pred HHhCCCCcCeEEecccchhHHHHH--H-------cCCCEEeccc--cccchHH-HHHHHHHhCeEEEeecccCC----cc
Confidence 45577785 778899999999876 2 5799998742 4555433 34443 3342 1110000 12
Q ss_pred CHHHHHHHHHhhc
Q 027287 186 NAKELMNKMEEYF 198 (225)
Q Consensus 186 d~ee~~~~l~~~~ 198 (225)
+.+++.+.+++..
T Consensus 415 ~~~~l~~av~~vl 427 (480)
T 2vch_A 415 RREEVARVVKGLM 427 (480)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 5666666666654
No 79
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=46.90 E-value=69 Score=28.05 Aligned_cols=139 Identities=17% Similarity=0.261 Sum_probs=65.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCC-CCCceEeec--CCHHHHHHHHHh--hCCEEEEecC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITG-ETVGEVKPV--ADMHQRKAEMAK--HSDAFIALPG 124 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~-~~~~~~~~~--~~m~~Rk~~mv~--~sDa~IvlpG 124 (225)
...+|+|+|..|++ +..-|+..|. +|+++-.... ..+... -..+.++.. .++.++-..+.. ..|++|-.-|
T Consensus 215 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 215 DNVVILGGGPIGLA--AVAILKHAGASKVILSEPSEV-RRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCHH-HHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHH-HHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 45778887655554 5556677787 8888843321 011100 011222221 234333332322 3677777777
Q ss_pred Cc-ccHHHHHHHHHHH---H------hCCCCCc------------EEEEeCCCC--chHHHHHHHHHHHcCCCCccc-cC
Q 027287 125 GY-GTLEELLEVITWA---Q------LGIHDKP------------VGLLNVDGY--YNSLLTFIDKAVEEGFISPNA-RH 179 (225)
Q Consensus 125 G~-GTL~Ei~~a~~~~---q------lg~~~kP------------iill~~~g~--w~~l~~~l~~~~~~gfi~~~~-~~ 179 (225)
+. .+++.+..++ |. . +|....+ +-+.+..++ .+.+. .+-.++++| ++... ..
T Consensus 292 ~~~~~~~~~~~~l-~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~-~~~~ll~~g-l~~~~~i~ 368 (404)
T 3ip1_A 292 VPQLVWPQIEEVI-WRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFP-RVISLMASG-MDMTKIIS 368 (404)
T ss_dssp CHHHHHHHHHHHH-HHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHH-HHHHHHHTT-CCGGGGCC
T ss_pred CcHHHHHHHHHHH-HhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHH-HHHHHHHcC-CChhheEE
Confidence 65 3555554443 10 1 1111111 112221111 22333 333466778 76543 34
Q ss_pred cEEEcCCHHHHHHHHH
Q 027287 180 IIVSAPNAKELMNKME 195 (225)
Q Consensus 180 ~i~~~~d~ee~~~~l~ 195 (225)
..+-.++..++++.+.
T Consensus 369 ~~~~l~~~~~A~~~~~ 384 (404)
T 3ip1_A 369 KTVSMEEIPEYIKRLQ 384 (404)
T ss_dssp EEECGGGHHHHHHHTT
T ss_pred EEeeHHHHHHHHHHHh
Confidence 5666777888877775
No 80
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=46.03 E-value=1.5e+02 Score=25.86 Aligned_cols=75 Identities=8% Similarity=0.091 Sum_probs=44.5
Q ss_pred EeecCCH-HHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccc
Q 027287 99 VKPVADM-HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNA 177 (225)
Q Consensus 99 ~~~~~~m-~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~ 177 (225)
+.+.+.+ ...-..++..||++|.=.||. ..|. .. .++|+++++...-|... ++.|.
T Consensus 265 v~l~~~lg~~~~~~l~~~adlvvt~SGgv--~~EA---~a------lG~Pvv~~~~~ter~e~-------v~~G~----- 321 (385)
T 4hwg_A 265 IRFLPAFSFTDYVKLQMNAFCILSDSGTI--TEEA---SI------LNLPALNIREAHERPEG-------MDAGT----- 321 (385)
T ss_dssp EEECCCCCHHHHHHHHHHCSEEEECCTTH--HHHH---HH------TTCCEEECSSSCSCTHH-------HHHTC-----
T ss_pred EEEEcCCCHHHHHHHHHhCcEEEECCccH--HHHH---HH------cCCCEEEcCCCccchhh-------hhcCc-----
Confidence 4444443 223556778999988666552 3343 32 57999998653224432 23342
Q ss_pred cCcEEEc-CCHHHHHHHHHhhcC
Q 027287 178 RHIIVSA-PNAKELMNKMEEYFP 199 (225)
Q Consensus 178 ~~~i~~~-~d~ee~~~~l~~~~~ 199 (225)
.+.+ .|++++.+.+.+...
T Consensus 322 ---~~lv~~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 322 ---LIMSGFKAERVLQAVKTITE 341 (385)
T ss_dssp ---CEECCSSHHHHHHHHHHHHT
T ss_pred ---eEEcCCCHHHHHHHHHHHHh
Confidence 2334 589999988887654
No 81
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=45.58 E-value=56 Score=27.59 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=69.0
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCC-CCCceEeec--CCHHHHHHHHHh--hCCEEEEecCC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITG-ETVGEVKPV--ADMHQRKAEMAK--HSDAFIALPGG 125 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~-~~~~~~~~~--~~m~~Rk~~mv~--~sDa~IvlpGG 125 (225)
...+|+||+ +|+=-++..-|...|.+|+++..+... .+... -..+..+.. .++.++-..+.. ..|++|-..|+
T Consensus 150 ~~vlV~Ga~-g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 150 DYVLLFAAA-GGVGLILNQLLKMKGAHTIAVASTDEK-LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp CEEEESSTT-BHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 456778854 244455666777888899988543210 01000 011222222 233332222221 25677766665
Q ss_pred cccHHHHHHHHHH----HHhCCC-------------CCcEEEEeC--CCCc---hHH---HHHHHHHHHcCCCCccccCc
Q 027287 126 YGTLEELLEVITW----AQLGIH-------------DKPVGLLNV--DGYY---NSL---LTFIDKAVEEGFISPNARHI 180 (225)
Q Consensus 126 ~GTL~Ei~~a~~~----~qlg~~-------------~kPiill~~--~g~w---~~l---~~~l~~~~~~gfi~~~~~~~ 180 (225)
.+++..+..+.- ..+|.. .|-+-+... .+|. +.+ ++.+-+++++|-++.. ...
T Consensus 228 -~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-i~~ 305 (334)
T 3qwb_A 228 -DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK-IYK 305 (334)
T ss_dssp -GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC-EEE
T ss_pred -HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc-eee
Confidence 566655443310 001111 111222211 1111 122 2333456788888765 445
Q ss_pred EEEcCCHHHHHHHHHhh
Q 027287 181 IVSAPNAKELMNKMEEY 197 (225)
Q Consensus 181 i~~~~d~ee~~~~l~~~ 197 (225)
.+-.++..++++.+.+-
T Consensus 306 ~~~l~~~~~A~~~~~~~ 322 (334)
T 3qwb_A 306 TYPLRDYRTAAADIESR 322 (334)
T ss_dssp EEEGGGHHHHHHHHHTT
T ss_pred EEcHHHHHHHHHHHHhC
Confidence 56778889999888763
No 82
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=45.49 E-value=96 Score=26.60 Aligned_cols=109 Identities=15% Similarity=0.236 Sum_probs=63.6
Q ss_pred eEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE-EcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCC-CCce
Q 027287 21 RICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV-YGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGE-TVGE 98 (225)
Q Consensus 21 ~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv-~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~-~~~~ 98 (225)
++=|++..+..-.+. ....+.++.|.+.|+.++ |--- - =..++...+.|-..+ +|... +...+ .+
T Consensus 107 KlEv~~d~~~llpD~--~~tv~aa~~L~~~Gf~Vlpy~~d--d--~~~akrl~~~G~~aV--mPlg~---pIGsG~Gi-- 173 (265)
T 1wv2_A 107 KLEVLADQKTLFPNV--VETLKAAEQLVKDGFDVMVYTSD--D--PIIARQLAEIGCIAV--MPLAG---LIGSGLGI-- 173 (265)
T ss_dssp EECCBSCTTTCCBCH--HHHHHHHHHHHTTTCEEEEEECS--C--HHHHHHHHHSCCSEE--EECSS---STTCCCCC--
T ss_pred EEEeecCccccCcCH--HHHHHHHHHHHHCCCEEEEEeCC--C--HHHHHHHHHhCCCEE--EeCCc---cCCCCCCc--
Confidence 444554444332222 235678888899999988 5542 2 234555667777655 55221 11111 11
Q ss_pred EeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 99 VKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 99 ~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
.++ +--+.+.+..+.-|+..||++|.+.+..++ ++|-. -+++++
T Consensus 174 ----~~~-~lI~~I~e~~~vPVI~eGGI~TPsDAa~Am---eLGAd---gVlVgS 217 (265)
T 1wv2_A 174 ----CNP-YNLRIILEEAKVPVLVDAGVGTASDAAIAM---ELGCE---AVLMNT 217 (265)
T ss_dssp ----SCH-HHHHHHHHHCSSCBEEESCCCSHHHHHHHH---HHTCS---EEEESH
T ss_pred ----CCH-HHHHHHHhcCCCCEEEeCCCCCHHHHHHHH---HcCCC---EEEECh
Confidence 122 223556677898888999999999999988 45532 345554
No 83
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=45.38 E-value=20 Score=31.00 Aligned_cols=42 Identities=24% Similarity=0.376 Sum_probs=27.6
Q ss_pred HHHHHHHhCCC-eEEEcCCCccHHHHHHHHHHhcC-CeEEEEeCC
Q 027287 42 ELGKELVARNI-DLVYGGGSVGLMGLISQAVYDGG-RHVIGVIPK 84 (225)
Q Consensus 42 ~lG~~LA~~G~-~lv~GGg~~GlM~a~a~gA~~aG-G~viGIiP~ 84 (225)
++++.++..++ .||..|| .|..-.++++..+.+ ...+|++|-
T Consensus 71 ~~~~~~~~~~~d~vvv~GG-DGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 71 LEAERAMHENYDVLIAAGG-DGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHTTTTCSEEEEEEC-HHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHHhhcCCCEEEEEcC-chHHHHHHHHHHhCCCCCcEEEecC
Confidence 34444444554 3555566 599999999986543 456899885
No 84
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=45.11 E-value=1e+02 Score=23.71 Aligned_cols=59 Identities=20% Similarity=0.198 Sum_probs=41.3
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.++|-+.+-.... ++.- +.-++..|..+||.+++-|.. ==.+.+.+.|.+.+-.+||+
T Consensus 17 ~~~~vlla~~~gd~-HdiG---~~~va~~l~~~G~eVi~lG~~-~p~e~lv~aa~~~~~diV~l 75 (161)
T 2yxb_A 17 RRYKVLVAKMGLDG-HDRG---AKVVARALRDAGFEVVYTGLR-QTPEQVAMAAVQEDVDVIGV 75 (161)
T ss_dssp CSCEEEEEEESSSS-CCHH---HHHHHHHHHHTTCEEECCCSB-CCHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEeCCCCc-cHHH---HHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHhcCCCEEEE
Confidence 44556665543333 3332 345667788899999998864 44677888899999999998
No 85
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=44.96 E-value=39 Score=27.37 Aligned_cols=86 Identities=15% Similarity=0.186 Sum_probs=53.6
Q ss_pred hhCCEEEEecCCcccHHHHHHHH-----HHHHhCCCCCcEEEEeC--CCCchHH--HHHHHHHHHcC--CCCccccCc--
Q 027287 114 KHSDAFIALPGGYGTLEELLEVI-----TWAQLGIHDKPVGLLNV--DGYYNSL--LTFIDKAVEEG--FISPNARHI-- 180 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~-----~~~qlg~~~kPiill~~--~g~w~~l--~~~l~~~~~~g--fi~~~~~~~-- 180 (225)
..+|++||.|-..+|+.-+..=+ +..-+ ..++|+++.-. ...|.+- .+.++.+.+.| ++++....-
T Consensus 80 ~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~a~-a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f~ 158 (194)
T 1p3y_1 80 RWADIYCIIPATANILGQTANGVAMNLVATTVL-AHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAFE 158 (194)
T ss_dssp HHCSEEEEEEECHHHHHHHHTTCCSSHHHHHHH-HSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC---
T ss_pred ccCCEEEEeCCCHHHHHHHHhhccCCHHHHHHH-HcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCcccc
Confidence 67999999999999998775211 10001 15799988632 2477753 44455566666 344443311
Q ss_pred -------E-EEcCCHHHHHHHHHhhcCC
Q 027287 181 -------I-VSAPNAKELMNKMEEYFPQ 200 (225)
Q Consensus 181 -------i-~~~~d~ee~~~~l~~~~~~ 200 (225)
. ---.+++++++.+.+....
T Consensus 159 lacg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 159 IATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp ---------CBCCCHHHHHHHHHHHCC-
T ss_pred cccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 2 2457999999999887643
No 86
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=44.91 E-value=1.3e+02 Score=24.77 Aligned_cols=46 Identities=22% Similarity=0.257 Sum_probs=26.9
Q ss_pred HHHhhCCEEEEecC---CcccHHHHHHHHHHHHhCCCCCcEEEEe-CCCCch
Q 027287 111 EMAKHSDAFIALPG---GYGTLEELLEVITWAQLGIHDKPVGLLN-VDGYYN 158 (225)
Q Consensus 111 ~mv~~sDa~IvlpG---G~GTL~Ei~~a~~~~qlg~~~kPiill~-~~g~w~ 158 (225)
.+++.....|+-|+ .+++-|.++..++ ..++ ..+=+++-+ .+|.|+
T Consensus 138 ~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA-~~l~-Ad~LiilTD~VdGVy~ 187 (256)
T 2va1_A 138 KAIEKEQVMIFVAGTGFPYFTTDSCAAIRA-AETE-SSIILMGKNGVDGVYD 187 (256)
T ss_dssp HHHHTTCEEEEESTTSSSSCCHHHHHHHHH-HHHT-CSEEEEEESSCCSBCS
T ss_pred HHHhCCcEEEEECCCCCCCCChhHHHHHHH-HhCC-CCEEEEeecccCeEEc
Confidence 44455555555543 2577787776664 2333 345555667 888885
No 87
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=44.57 E-value=71 Score=25.84 Aligned_cols=55 Identities=11% Similarity=0.191 Sum_probs=34.2
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.++|-|.|+++. ..+.+++.|+++|+.|+.-+-...-.+.+.+...+.|+.+..+
T Consensus 7 ~k~vlVTGas~G--------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (252)
T 3h7a_A 7 NATVAVIGAGDY--------IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61 (252)
T ss_dssp SCEEEEECCSSH--------HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCch--------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Confidence 356777765542 3467888889999998866544344444555444556666555
No 88
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=44.54 E-value=13 Score=31.02 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=24.3
Q ss_pred eEEEEeCCCCCCChHHHHHHHHHHHHHHhCC--CeEEEcCCC
Q 027287 21 RICVFCGSSAGKKSTYKDAAIELGKELVARN--IDLVYGGGS 60 (225)
Q Consensus 21 ~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G--~~lv~GGg~ 60 (225)
.|-=||||.....+...+.++++..+....+ ..||+|||+
T Consensus 5 ~ViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vVvV~Ggg~ 46 (258)
T 1gs5_A 5 LIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGC 46 (258)
T ss_dssp EEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHH
T ss_pred EEEEEChhHhCChHHHHHHHHHHHHHHHcCCCeEEEEeCCcH
Confidence 3444888887543345556666655544334 468999984
No 89
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=44.22 E-value=34 Score=25.47 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=38.1
Q ss_pred CCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCcc-----ccCCCCCCCCceEeecC--CHHHHHHHHHhhCCEEEEe
Q 027287 50 RNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTL-----MPREITGETVGEVKPVA--DMHQRKAEMAKHSDAFIAL 122 (225)
Q Consensus 50 ~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~-----~~~e~~~~~~~~~~~~~--~m~~Rk~~mv~~sDa~Ivl 122 (225)
+++.+|.|+|..| ..+++...+.|-.++.|-++.. ..... ... ...+..+ +-..-+..-+..+|++|+.
T Consensus 3 ~~~vlI~G~G~vG--~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGHSILA--INTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDN-ADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECCSHHH--HHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTT-CEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCcEEEECCCHHH--HHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCC-CeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 4567788876544 4556666667777887754310 00000 111 2233322 2222222235789999998
Q ss_pred cCCc
Q 027287 123 PGGY 126 (225)
Q Consensus 123 pGG~ 126 (225)
.+.-
T Consensus 79 ~~~d 82 (153)
T 1id1_A 79 SDND 82 (153)
T ss_dssp SSCH
T ss_pred cCCh
Confidence 8764
No 90
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=44.05 E-value=11 Score=32.32 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=23.5
Q ss_pred cceEEE-EeCCCCCCChHHHHHHHHHHHHHHhCCC--eEEEcCCC
Q 027287 19 FNRICV-FCGSSAGKKSTYKDAAIELGKELVARNI--DLVYGGGS 60 (225)
Q Consensus 19 ~~~V~V-fggs~~~~~~~~~~~A~~lG~~LA~~G~--~lv~GGg~ 60 (225)
+++|.| ||||.........+.++++.. |.+.|+ .||.|||+
T Consensus 25 ~k~iViKlGGs~l~~~~~~~~~~~~i~~-l~~~G~~vViVhGgG~ 68 (299)
T 2ap9_A 25 GKVVVVKYGGNAMTDDTLRRAFAADMAF-LRNCGIHPVVVHGGGP 68 (299)
T ss_dssp TCEEEEEECTHHHHSHHHHHHHHHHHHH-HHTTTCEEEEEECCSH
T ss_pred CCeEEEEECchhhCCchHHHHHHHHHHH-HHHCCCcEEEEECCcH
Confidence 344555 777765432334455555544 345565 57899875
No 91
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=43.59 E-value=31 Score=31.09 Aligned_cols=141 Identities=14% Similarity=0.088 Sum_probs=72.6
Q ss_pred HHHHHHHHh---CCCeEEEcCCCcc------HHHHHHHHHHhcCCeEEEEeCCc--cccCCCCCCC--CceEeecCCHHH
Q 027287 41 IELGKELVA---RNIDLVYGGGSVG------LMGLISQAVYDGGRHVIGVIPKT--LMPREITGET--VGEVKPVADMHQ 107 (225)
Q Consensus 41 ~~lG~~LA~---~G~~lv~GGg~~G------lM~a~a~gA~~aGG~viGIiP~~--~~~~e~~~~~--~~~~~~~~~m~~ 107 (225)
.++-++|.+ +...+|++|.. | .+..++++..+.+-+++=++... ..+.+..... -....+......
T Consensus 264 ~~~~~wl~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq 342 (463)
T 2acv_A 264 DLILKWLDEQPDKSVVFLCFGSM-GVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQ 342 (463)
T ss_dssp HHHHHHHHTSCTTCEEEEECCSS-CCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCH
T ss_pred hhHHHHHhcCCCCceEEEEeccc-cccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCH
Confidence 356677764 35777788874 6 35666676666677776665432 1111110000 012233333333
Q ss_pred HHHHHHhhCC-EEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHH-HcCCCCcc----ccCcE
Q 027287 108 RKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAV-EEGFISPN----ARHII 181 (225)
Q Consensus 108 Rk~~mv~~sD-a~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~-~~gfi~~~----~~~~i 181 (225)
. .+| .+.. ..++--||.||..|.. + +++|++++-. +.++.. ..+.++ +.|.--.- ..+.
T Consensus 343 ~-~vL-~h~~~~~fvth~G~~s~~Eal--~-------~GvP~i~~P~--~~dQ~~-Na~~lv~~~g~g~~l~~~~~~~~- 407 (463)
T 2acv_A 343 V-EVL-AHKAIGGFVSHCGWNSILESM--W-------FGVPILTWPI--YAEQQL-NAFRLVKEWGVGLGLRVDYRKGS- 407 (463)
T ss_dssp H-HHH-HSTTEEEEEECCCHHHHHHHH--H-------TTCCEEECCC--STTHHH-HHHHHHHTSCCEEESCSSCCTTC-
T ss_pred H-HHh-CCCccCeEEecCCchhHHHHH--H-------cCCCeeeccc--hhhhHH-HHHHHHHHcCeEEEEecccCCCC-
Confidence 2 333 3322 3566789999988875 2 6899999742 455533 334433 33421100 0000
Q ss_pred EEcCCHHHHHHHHHhhc
Q 027287 182 VSAPNAKELMNKMEEYF 198 (225)
Q Consensus 182 ~~~~d~ee~~~~l~~~~ 198 (225)
-.-+.+++.+.+++..
T Consensus 408 -~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 408 -DVVAAEEIEKGLKDLM 423 (463)
T ss_dssp -CCCCHHHHHHHHHHHT
T ss_pred -ccccHHHHHHHHHHHH
Confidence 0126778877777765
No 92
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=43.41 E-value=1.3e+02 Score=25.92 Aligned_cols=70 Identities=24% Similarity=0.133 Sum_probs=41.3
Q ss_pred HHHHHhhCCEEEEec----CCcccHHHHHHHHHHHHhCCCCCcEEEE-eCCCCchHHHHHHHHHHHcCCCCccccCcEEE
Q 027287 109 KAEMAKHSDAFIALP----GGYGTLEELLEVITWAQLGIHDKPVGLL-NVDGYYNSLLTFIDKAVEEGFISPNARHIIVS 183 (225)
Q Consensus 109 k~~mv~~sDa~Ivlp----GG~GTL~Ei~~a~~~~qlg~~~kPiill-~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~ 183 (225)
...++..||++++.+ +|--++ .|++ ..++|||.- +..+ +.++.+ ...+.| .++.
T Consensus 271 l~~~y~~aDv~vl~ss~~e~gg~~~---lEAm------A~G~PVI~~~~~~~-~~e~~~---~~~~~G--------~l~~ 329 (374)
T 2xci_A 271 LKELYPVGKIAIVGGTFVNIGGHNL---LEPT------CWGIPVIYGPYTHK-VNDLKE---FLEKEG--------AGFE 329 (374)
T ss_dssp HHHHGGGEEEEEECSSSSSSCCCCC---HHHH------TTTCCEEECSCCTT-SHHHHH---HHHHTT--------CEEE
T ss_pred HHHHHHhCCEEEECCcccCCCCcCH---HHHH------HhCCCEEECCCccC-hHHHHH---HHHHCC--------CEEE
Confidence 345778999988743 222443 4445 268999862 2222 333333 233334 3566
Q ss_pred cCCHHHHHHHHHhhcC
Q 027287 184 APNAKELMNKMEEYFP 199 (225)
Q Consensus 184 ~~d~ee~~~~l~~~~~ 199 (225)
++|++++.+.|.+...
T Consensus 330 ~~d~~~La~ai~~ll~ 345 (374)
T 2xci_A 330 VKNETELVTKLTELLS 345 (374)
T ss_dssp CCSHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHh
Confidence 7899999888887654
No 93
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=43.23 E-value=1.1e+02 Score=25.86 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=68.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhc-CCeEEEEeCCccccCCCCC-CCCceEee-cCCHHHHHHHHHh--hCCEEEEecCC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDG-GRHVIGVIPKTLMPREITG-ETVGEVKP-VADMHQRKAEMAK--HSDAFIALPGG 125 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~a-GG~viGIiP~~~~~~e~~~-~~~~~~~~-~~~m~~Rk~~mv~--~sDa~IvlpGG 125 (225)
...+|.|+|..|++ +..-|+.. |.+|+++-.+... .+... -..+..+. .+++.++-..+.. ..|+++-..|+
T Consensus 173 ~~vlv~GaG~vG~~--a~qla~~~g~~~Vi~~~~~~~~-~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 173 STAVVIGVGGLGHV--GIQILRAVSAARVIAVDLDDDR-LALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA 249 (345)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHCCCEEEEEESCHHH-HHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEEcCCHHH-HHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC
Confidence 45677887655554 34455555 5688888443210 11100 11122222 2234333332322 46777777787
Q ss_pred cccHHHHHHHHHH----HHhCCCCC-c-----------EEEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEcCCHH
Q 027287 126 YGTLEELLEVITW----AQLGIHDK-P-----------VGLLNVDGY-YNSLLTFIDKAVEEGFISPNARHIIVSAPNAK 188 (225)
Q Consensus 126 ~GTL~Ei~~a~~~----~qlg~~~k-P-----------iill~~~g~-w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~e 188 (225)
..|+++....+.- ..+|.... + +-+.....+ ++.+. .+-+++++|-++.. ...+-.++..
T Consensus 250 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~-~~~~l~~~g~l~~~--~~~~~l~~~~ 326 (345)
T 3jv7_A 250 QSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELM-EVVALARAGRLDIH--TETFTLDEGP 326 (345)
T ss_dssp HHHHHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHHH-HHHHHHHTTCCCCC--EEEECSTTHH
T ss_pred HHHHHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHHH-HHHHHHHcCCCceE--EEEEcHHHHH
Confidence 6677766654410 00111111 1 111111111 12333 33346778888762 2466788888
Q ss_pred HHHHHHHhh
Q 027287 189 ELMNKMEEY 197 (225)
Q Consensus 189 e~~~~l~~~ 197 (225)
++++.+.+-
T Consensus 327 ~A~~~~~~~ 335 (345)
T 3jv7_A 327 AAYRRLREG 335 (345)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 998888764
No 94
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=43.18 E-value=32 Score=29.50 Aligned_cols=143 Identities=13% Similarity=0.086 Sum_probs=70.9
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCC-CCCceEee--cCCHHHHHHHHHh--hCCEEEEecC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITG-ETVGEVKP--VADMHQRKAEMAK--HSDAFIALPG 124 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~-~~~~~~~~--~~~m~~Rk~~mv~--~sDa~IvlpG 124 (225)
...+|+|+|+.|++ +..-|+..|. +|+++-+... ..+... -..+.++. ..++.++-..+.. ..|+++-..|
T Consensus 168 ~~VlV~GaG~vG~~--a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 168 DTVCVIGIGPVGLM--SVAGANHLGAGRIFAVGSRKH-CCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CCEEEECCSHHHHH--HHHHHHTTTCSSEEEECCCHH-HHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCcEEEEECCCHH-HHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 45677887654544 4455666776 7888744321 011100 01122222 2344443333322 3677777788
Q ss_pred CcccHHHHHHHHHH----HHhCCC--CCcE--------------EEEeCCCC-chHHHHHHHHHHHcCCCCcccc-CcEE
Q 027287 125 GYGTLEELLEVITW----AQLGIH--DKPV--------------GLLNVDGY-YNSLLTFIDKAVEEGFISPNAR-HIIV 182 (225)
Q Consensus 125 G~GTL~Ei~~a~~~----~qlg~~--~kPi--------------ill~~~g~-w~~l~~~l~~~~~~gfi~~~~~-~~i~ 182 (225)
+..++++.+..+.- ..+|.. ..++ -+.....+ ....+..+-+++++|-++.... ...+
T Consensus 245 ~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~ 324 (352)
T 3fpc_A 245 DVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVF 324 (352)
T ss_dssp CTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEE
T ss_pred ChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCCChhHhheeeC
Confidence 77788877655410 011211 1111 11111100 1122333445778888876532 4455
Q ss_pred E-cCCHHHHHHHHHh
Q 027287 183 S-APNAKELMNKMEE 196 (225)
Q Consensus 183 ~-~~d~ee~~~~l~~ 196 (225)
- .++..++++.+.+
T Consensus 325 ~gl~~~~~A~~~~~~ 339 (352)
T 3fpc_A 325 RGFDNIEKAFMLMKD 339 (352)
T ss_dssp ESTTHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHh
Confidence 5 7888888888866
No 95
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=42.57 E-value=1.2e+02 Score=26.15 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=43.4
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCC-CCCceEeec----CCHHHHHHHHH-hhCCEEEEec
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITG-ETVGEVKPV----ADMHQRKAEMA-KHSDAFIALP 123 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~-~~~~~~~~~----~~m~~Rk~~mv-~~sDa~Ivlp 123 (225)
...+|+|+|+.|++ +..-|+..|. +|+++-++... .+... -..+..+.. .++.++-..+. ...|++|-..
T Consensus 195 ~~VlV~GaG~vG~~--a~q~a~~~Ga~~Vi~~~~~~~~-~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 195 SNVAIFGLGTVGLA--VAEGAKTAGASRIIGIDIDSKK-YETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CCEEEECCSHHHHH--HHHHHHHHTCSCEEEECSCTTH-HHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHHH-HHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 56778888765655 4455666776 78888433211 11111 112222222 23433222221 1368888888
Q ss_pred CCcccHHHHHHHH
Q 027287 124 GGYGTLEELLEVI 136 (225)
Q Consensus 124 GG~GTL~Ei~~a~ 136 (225)
|+..++++.+..+
T Consensus 272 g~~~~~~~~~~~l 284 (378)
T 3uko_A 272 GNVSVMRAALECC 284 (378)
T ss_dssp CCHHHHHHHHHTB
T ss_pred CCHHHHHHHHHHh
Confidence 8767777666544
No 96
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=41.65 E-value=66 Score=27.60 Aligned_cols=137 Identities=16% Similarity=0.116 Sum_probs=64.4
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccc----cCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCCc
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLM----PREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGY 126 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~----~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~ 126 (225)
...+|+|+|+.|++ +..-|+..|.+|+++...... .++.. .+.++...+- ++-..+....|++|-.-|+.
T Consensus 182 ~~VlV~GaG~vG~~--a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lG---a~~vi~~~~~-~~~~~~~~g~D~vid~~g~~ 255 (357)
T 2cf5_A 182 LRGGILGLGGVGHM--GVKIAKAMGHHVTVISSSNKKREEALQDLG---ADDYVIGSDQ-AKMSELADSLDYVIDTVPVH 255 (357)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHTCEEEEEESSTTHHHHHHTTSC---CSCEEETTCH-HHHHHSTTTEEEEEECCCSC
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCeEEEEeCChHHHHHHHHHcC---CceeeccccH-HHHHHhcCCCCEEEECCCCh
Confidence 45677887655544 445566778899888654321 01221 2223333332 11111123457777777766
Q ss_pred ccHHHHHHHHHH----HHhCCCCCc------------EEEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEcCCHHH
Q 027287 127 GTLEELLEVITW----AQLGIHDKP------------VGLLNVDGY-YNSLLTFIDKAVEEGFISPNARHIIVSAPNAKE 189 (225)
Q Consensus 127 GTL~Ei~~a~~~----~qlg~~~kP------------iill~~~g~-w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee 189 (225)
-++++....+.- ..+|....| +-+.+...+ .+.+.+. -+++++|-++... ..+-.++..+
T Consensus 256 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~-~~l~~~g~l~~~~--~~~~l~~~~~ 332 (357)
T 2cf5_A 256 HALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEM-LEFCKEKGLSSII--EVVKMDYVNT 332 (357)
T ss_dssp CCSHHHHTTEEEEEEEEECSCCSSCCCCCHHHHHHHTCEEEECCSCCHHHHHHH-HHHHHHTTCCCCE--EEEEGGGHHH
T ss_pred HHHHHHHHHhccCCEEEEeCCCCCCccccCHHHHhCccEEEEEccCCHHHHHHH-HHHHHcCCCCCce--EEEeHHHHHH
Confidence 666665543310 001111111 111111111 1222222 2345667776542 3566778888
Q ss_pred HHHHHHh
Q 027287 190 LMNKMEE 196 (225)
Q Consensus 190 ~~~~l~~ 196 (225)
+++.+++
T Consensus 333 A~~~~~~ 339 (357)
T 2cf5_A 333 AFERLEK 339 (357)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 8888765
No 97
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=41.44 E-value=40 Score=29.53 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=35.0
Q ss_pred hhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 027287 114 KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLTFIDK 166 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~-----g~w~~l~~~l~~ 166 (225)
+..|+|||..| .-||+|-+.++.+.- ...+|||||-+.- --.|...+++..
T Consensus 72 ~~~dG~VItHG-TDTmeeTA~~Ls~ll-~~~~kPVVlTGAqrP~~~~~sDg~~NL~~A 127 (328)
T 1wls_A 72 WEYDGIVITHG-TDTMAYSASMLSFML-RNPPIPIVLTGSMLPITEKNSDAPFNLRTA 127 (328)
T ss_dssp TTCSEEEEECC-GGGHHHHHHHHHHHE-ESCSSEEEEECCSSCTTSSSCSHHHHHHHH
T ss_pred ccCCeEEEEcC-CchHHHHHHHHHHHH-hCCCCCEEEECCCCCCCCCCCchHHHHHHH
Confidence 45799999975 799999998886432 2358999997642 134455555543
No 98
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=41.21 E-value=26 Score=30.20 Aligned_cols=41 Identities=22% Similarity=0.395 Sum_probs=25.7
Q ss_pred HHHHHHhCCC-eEEEcCCCccHHHHHHHHHHhc---CCeEEEEeCC
Q 027287 43 LGKELVARNI-DLVYGGGSVGLMGLISQAVYDG---GRHVIGVIPK 84 (225)
Q Consensus 43 lG~~LA~~G~-~lv~GGg~~GlM~a~a~gA~~a---GG~viGIiP~ 84 (225)
+++.++..++ .||.-|| .|.+-.++++..+. -...+|++|.
T Consensus 74 ~~~~~~~~~~d~vvv~GG-DGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 74 YVEEARKFGVATVIAGGG-DGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHHHHHHTCSEEEEEES-HHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred HHHHHHhcCCCEEEEEcc-chHHHHHHHHHhhcccCCCCeEEEecC
Confidence 3334433344 3444555 59999999998853 2345899885
No 99
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=41.04 E-value=99 Score=26.05 Aligned_cols=43 Identities=28% Similarity=0.245 Sum_probs=27.4
Q ss_pred hhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCc
Q 027287 114 KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 157 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w 157 (225)
+...+.|+|+||. |...+++.+.-..-++-=.-|.+++.+.||
T Consensus 53 ~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 95 (268)
T 3ico_A 53 ARGQALIVLTGGG-NGIALLRYLSAQAQQIEWSKVHLFWGDERY 95 (268)
T ss_dssp HHSCEEEEECCSH-HHHHHHHHHHHHGGGSCGGGEEEEESEEEC
T ss_pred hcCceEEEEecCC-chhHHHHHHHHHhhhhhheeeEEeeccccc
Confidence 3678999999995 767777666532111211456677776676
No 100
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=40.66 E-value=1.3e+02 Score=26.26 Aligned_cols=74 Identities=9% Similarity=0.039 Sum_probs=42.7
Q ss_pred HHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcC
Q 027287 106 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAP 185 (225)
Q Consensus 106 ~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~ 185 (225)
.+|-...++.||.+||++= +++..=......... .++.|++++|.+- . +.+...-+.+..
T Consensus 197 ~~~a~~~~~~aDllLViGT-SL~V~Paa~l~~~a~--~~G~~vviIN~~~--t---------------~~d~~adl~i~g 256 (318)
T 3k35_A 197 LALADEASRNADLSITLGT-SLQIRPSGNLPLATK--RRGGRLVIVNLQP--T---------------KHDRHADLRIHG 256 (318)
T ss_dssp HHHHHHHHHTCSEEEEESC-CCCSTTGGGHHHHHH--HTTCEEEEECSSC--C---------------TTGGGCSEEECS
T ss_pred HHHHHHHHhcCCEEEEEcc-CCCchhhhhhHHHHH--hcCCEEEEECCCC--C---------------CCCCcccEEEeC
Confidence 4566677789999988853 332211111110001 2568999998641 0 011223357788
Q ss_pred CHHHHHHHHHhhcC
Q 027287 186 NAKELMNKMEEYFP 199 (225)
Q Consensus 186 d~ee~~~~l~~~~~ 199 (225)
+.++++..|.+...
T Consensus 257 ~~~evl~~L~~~Lg 270 (318)
T 3k35_A 257 YVDEVMTRLMKHLG 270 (318)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999887643
No 101
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=40.65 E-value=1.1e+02 Score=24.64 Aligned_cols=12 Identities=17% Similarity=0.191 Sum_probs=8.9
Q ss_pred hCCEEEEecCCc
Q 027287 115 HSDAFIALPGGY 126 (225)
Q Consensus 115 ~sDa~IvlpGG~ 126 (225)
.-|++|-..|-.
T Consensus 104 ~id~li~nAg~~ 115 (272)
T 4e3z_A 104 RLDGLVNNAGIV 115 (272)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 458998888754
No 102
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=40.54 E-value=14 Score=31.18 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=24.0
Q ss_pred ceEEE-EeCCCCCCChHHHHHHHHHHHHHHhCCC--eEEEcCCC
Q 027287 20 NRICV-FCGSSAGKKSTYKDAAIELGKELVARNI--DLVYGGGS 60 (225)
Q Consensus 20 ~~V~V-fggs~~~~~~~~~~~A~~lG~~LA~~G~--~lv~GGg~ 60 (225)
++|.| ||||...........++++.. |.+.|+ .||.|||+
T Consensus 22 ~~iViKlGGs~l~~~~~~~~~~~~i~~-l~~~G~~vVlVhGgG~ 64 (282)
T 2bty_A 22 KTFVIKFGGSAMKQENAKKAFIQDIIL-LKYTGIKPIIVHGGGP 64 (282)
T ss_dssp CEEEEEECSHHHHSHHHHHHHHHHHHH-HHHTTCEEEEEECCSH
T ss_pred CeEEEEECchhhCChhHHHHHHHHHHH-HHHCCCcEEEEECCcH
Confidence 44555 777765432334556666654 445566 57899876
No 103
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=40.52 E-value=46 Score=25.69 Aligned_cols=38 Identities=21% Similarity=0.132 Sum_probs=22.6
Q ss_pred CcceEEEEeCCCCC-CChHHHHHHHHHHHHHHhCCCeEE
Q 027287 18 KFNRICVFCGSSAG-KKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 18 ~~~~V~Vfggs~~~-~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
+-++|+|||..... -...|...+..+-+.|.+.|..++
T Consensus 87 ~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~~~~ 125 (179)
T 1yob_A 87 SGKTVALFGLGDQVGYPENYLDALGELYSFFKDRGAKIV 125 (179)
T ss_dssp TTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTCEEE
T ss_pred CCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEE
Confidence 34577777643322 112355566777777777777766
No 104
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=40.23 E-value=29 Score=29.52 Aligned_cols=42 Identities=17% Similarity=0.222 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCC-eEEEcCCCccHHHHHHHHHHhc-CCeEEEEeCC
Q 027287 41 IELGKELVARNI-DLVYGGGSVGLMGLISQAVYDG-GRHVIGVIPK 84 (225)
Q Consensus 41 ~~lG~~LA~~G~-~lv~GGg~~GlM~a~a~gA~~a-GG~viGIiP~ 84 (225)
.++++.+++ ++ .||..|| .|....++.+.... ....+|++|.
T Consensus 54 ~~~~~~~~~-~~d~vv~~GG-DGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 54 TKYCQEFAS-KVDLIIVFGG-DGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHHTT-TCSEEEEEEC-HHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHHhhc-CCCEEEEEcc-chHHHHHHHHHhhCCCCCcEEEecC
Confidence 344455444 43 4555666 59999999988763 3567999985
No 105
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=40.11 E-value=62 Score=26.21 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=31.1
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.++|-|-|+++ + ..+.+++.|+++|+.|+.-+...---+++.+...+.|+++..+
T Consensus 12 ~k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 66 (256)
T 3gaf_A 12 DAVAIVTGAAA-G-------IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGL 66 (256)
T ss_dssp TCEEEECSCSS-H-------HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 34666665544 2 2456778888889988755443222233333344456666655
No 106
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=39.75 E-value=1.4e+02 Score=23.53 Aligned_cols=75 Identities=11% Similarity=0.007 Sum_probs=38.7
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcC-CeEEEEeCCccccCCCCCCCCceEeecCCHH--HHHHHHHhhCCEEEEecCCccc
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGG-RHVIGVIPKTLMPREITGETVGEVKPVADMH--QRKAEMAKHSDAFIALPGGYGT 128 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aG-G~viGIiP~~~~~~e~~~~~~~~~~~~~~m~--~Rk~~mv~~sDa~IvlpGG~GT 128 (225)
..|||||. +|+=.++++...+.| -.|+.+.-+.....+..... .+. +..++. +--..+++..|++|...|+...
T Consensus 25 ~vlVtGat-G~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~-~~~-~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 25 NVLILGAG-GQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN-SQI-IMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp EEEEETTT-SHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTT-EEE-EECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred EEEEEeCC-cHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCC-cEE-EEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 36788876 366667777777777 46666532111111111111 122 223332 2222345678999988887554
Q ss_pred H
Q 027287 129 L 129 (225)
Q Consensus 129 L 129 (225)
.
T Consensus 102 ~ 102 (236)
T 3qvo_A 102 D 102 (236)
T ss_dssp H
T ss_pred h
Confidence 3
No 107
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=39.40 E-value=2.1e+02 Score=25.51 Aligned_cols=71 Identities=18% Similarity=0.173 Sum_probs=43.7
Q ss_pred hCCEEEE-ecCCcccHHHHHHHHHHH--HhCCCCCcEEEE-eCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCHHHH
Q 027287 115 HSDAFIA-LPGGYGTLEELLEVITWA--QLGIHDKPVGLL-NVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKEL 190 (225)
Q Consensus 115 ~sDa~Iv-lpGG~GTL~Ei~~a~~~~--qlg~~~kPiill-~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~ 190 (225)
..|++++ +.||+=.-+++.+.+.-. .++ +++||++- .++ -++.-.+. +.+.| + .++.++|++++
T Consensus 317 ~v~~ilvni~ggi~~~d~vA~gii~a~~~~~-~~~Pivvrl~G~-n~~~g~~~---L~~~g-l------~~~~~~~~~~A 384 (395)
T 2fp4_B 317 KVEAILVNIFGGIVNCAIIANGITKACRELE-LKVPLVVRLEGT-NVHEAQNI---LTNSG-L------PITSAVDLEDA 384 (395)
T ss_dssp TCCEEEEEEEESSSCHHHHHHHHHHHHHHHT-CCSCEEEEEEET-THHHHHHH---HHHTC-S------CCEECSSHHHH
T ss_pred CCCEEEEEecCCccCcHHHHHHHHHHHHhcC-CCCeEEEEcCCC-CHHHHHHH---HHHCC-C------ceEeCCCHHHH
Confidence 3466554 568888888888765432 232 57999973 333 23333333 32334 1 35678999999
Q ss_pred HHHHHhh
Q 027287 191 MNKMEEY 197 (225)
Q Consensus 191 ~~~l~~~ 197 (225)
.+.+.+.
T Consensus 385 a~~~v~~ 391 (395)
T 2fp4_B 385 AKKAVAS 391 (395)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9988764
No 108
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=39.16 E-value=26 Score=29.75 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=24.7
Q ss_pred hhCCEEEEecCCc-ccHHHHHHHHHHHHhCCCCCcEEEEeCCCC
Q 027287 114 KHSDAFIALPGGY-GTLEELLEVITWAQLGIHDKPVGLLNVDGY 156 (225)
Q Consensus 114 ~~sDa~IvlpGG~-GTL~Ei~~a~~~~qlg~~~kPiill~~~g~ 156 (225)
..+|++|||+||. +.+++..+.+ +-+ ..|+++-++.|.
T Consensus 35 ~~~D~IVVLG~~~~~Rl~~A~~L~---~~g--~~~lIvSGG~g~ 73 (266)
T 3ca8_A 35 YQADCVILAGNAVMPTIDAACKIA---RDQ--QIPLLISGGIGH 73 (266)
T ss_dssp CCCSEEEEESCCCHHHHHHHHHHH---HHH--TCCEEEECCSST
T ss_pred CCCCEEEECCCCchHHHHHHHHHH---HcC--CCcEEEECCCCC
Confidence 3699999999986 5666666555 333 237766554444
No 109
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=39.03 E-value=42 Score=29.47 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 38 DAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 38 ~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.++++++.|-++|..+|+... |.| .+.++|.+.|..+||+
T Consensus 195 ~kg~~~a~~l~~~G~DvIf~~~--d~~-Gv~~aa~e~Gv~vIG~ 235 (356)
T 3s99_A 195 GKEADAAKALIDQGVDIITQHT--DST-AAIQVAHDRGIKAFGQ 235 (356)
T ss_dssp HHHHHHHHHHHHTTCSEEEESS--SSS-HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEECC--Cch-HHHHHHHHcCCEEEEE
Confidence 3567788888888999997764 335 4567788899999999
No 110
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=38.95 E-value=45 Score=27.39 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=26.9
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|+|.+|......+.-...++.+.+.+.+.|+.++.=.
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~ 41 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVD 41 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEe
Confidence 579998775543233323467889999999999877543
No 111
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=38.63 E-value=50 Score=27.83 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=24.8
Q ss_pred ccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 15 NQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
...++++|.+++.......--....+..+++.|++.||.+.
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~ 56 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVS 56 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEE
Confidence 34567789999754322212334567899999999998765
No 112
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=38.62 E-value=23 Score=26.22 Aligned_cols=67 Identities=21% Similarity=0.263 Sum_probs=41.7
Q ss_pred HhhCCEEEEecCCcc-----cHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcccc--CcEEEcC
Q 027287 113 AKHSDAFIALPGGYG-----TLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNAR--HIIVSAP 185 (225)
Q Consensus 113 v~~sDa~IvlpGG~G-----TL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~--~~i~~~~ 185 (225)
++.||++|+|.|-.- --.|+-.|+ ..+|||+.+.+.|-- . ++.... ..-.+.-
T Consensus 36 I~~~~~vIvL~G~~t~~s~wv~~EI~~A~------~~gkpIigV~~~g~~-~-------------~P~~l~~~a~~iV~W 95 (111)
T 1eiw_A 36 PEDADAVIVLAGLWGTRRDEILGAVDLAR------KSSKPIITVRPYGLE-N-------------VPPELEAVSSEVVGW 95 (111)
T ss_dssp SSSCSEEEEEGGGTTTSHHHHHHHHHHHT------TTTCCEEEECCSSSS-C-------------CCTTHHHHCSEEECS
T ss_pred cccCCEEEEEeCCCcCCChHHHHHHHHHH------HcCCCEEEEEcCCCC-c-------------CCHHHHhhCceeccC
Confidence 367899999998654 334554443 478999999876531 1 111111 2235566
Q ss_pred CHHHHHHHHHhhcC
Q 027287 186 NAKELMNKMEEYFP 199 (225)
Q Consensus 186 d~ee~~~~l~~~~~ 199 (225)
+.+.+++.|.+...
T Consensus 96 n~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 96 NPHCIRDALEDALD 109 (111)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhccC
Confidence 78888888887643
No 113
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=38.45 E-value=56 Score=26.32 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=26.4
Q ss_pred HHHHHHHHhCCCeEEEcCCCc-----------------cHHHHHHHHHHhcCCeEEEEeC
Q 027287 41 IELGKELVARNIDLVYGGGSV-----------------GLMGLISQAVYDGGRHVIGVIP 83 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~GGg~~-----------------GlM~a~a~gA~~aGG~viGIiP 83 (225)
.+.++.|.+.|...+.-++++ |+++++.+.|...+++.|||+-
T Consensus 64 ~~~~~~l~~~g~d~iviaCnTa~~~~~~l~~~~~iPvi~i~~~~~~~a~~~~~~rigvla 123 (228)
T 1jfl_A 64 IWTAKRLEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETAKKVKELGFKKAGLLA 123 (228)
T ss_dssp HHHHHHHHHHTCSEEECSCTGGGGGHHHHHHHCSSCBCCHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCccHHHHHHHHHHhCCCCEechHHHHHHHHHHcCCCeEEEEe
Confidence 355666666677655444432 3566667766665777788863
No 114
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=38.06 E-value=1.3e+02 Score=25.32 Aligned_cols=30 Identities=17% Similarity=0.130 Sum_probs=18.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeE-EEEe
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHV-IGVI 82 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~v-iGIi 82 (225)
...+|+|+| |+=..+..-|+..|..+ +.+-
T Consensus 162 ~~VlV~GaG--~vG~~aiq~ak~~G~~~vi~~~ 192 (346)
T 4a2c_A 162 KNVIIIGAG--TIGLLAIQCAVALGAKSVTAID 192 (346)
T ss_dssp SEEEEECCS--HHHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEEEECCC--CcchHHHHHHHHcCCcEEEEEe
Confidence 455667765 44445667788888766 4443
No 115
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=37.88 E-value=58 Score=22.93 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=22.5
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe--EEEcCC
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID--LVYGGG 59 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~--lv~GGg 59 (225)
.+-+.|.|||.+.. .|...+..|.+.||. ++.||-
T Consensus 54 ~~~~~ivvyC~~G~--------rs~~aa~~L~~~G~~~~~l~GG~ 90 (110)
T 2k0z_A 54 HKDKKVLLHCRAGR--------RALDAAKSMHELGYTPYYLEGNV 90 (110)
T ss_dssp CSSSCEEEECSSSH--------HHHHHHHHHHHTTCCCEEEESCG
T ss_pred CCCCEEEEEeCCCc--------hHHHHHHHHHHCCCCEEEecCCH
Confidence 34567999986541 345667777777773 555653
No 116
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=37.81 E-value=26 Score=27.28 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=22.2
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHh-CCCeE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVA-RNIDL 54 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~-~G~~l 54 (225)
.|++|.|+.+|..++ -.+.|+.+.+.|.+ .|+.+
T Consensus 3 ~M~kiliiy~S~~Gn---T~~~a~~i~~~l~~~~g~~v 37 (188)
T 2ark_A 3 AMGKVLVIYDTRTGN---TKKMAELVAEGARSLEGTEV 37 (188)
T ss_dssp CCEEEEEEECCSSSH---HHHHHHHHHHHHHTSTTEEE
T ss_pred CCCEEEEEEECCCcH---HHHHHHHHHHHHhhcCCCeE
Confidence 466787777776553 23567788888776 66543
No 117
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=37.68 E-value=1.6e+02 Score=23.83 Aligned_cols=38 Identities=8% Similarity=-0.027 Sum_probs=24.5
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG 57 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G 57 (225)
|.++|+|+..+. .++-+.+....+-+.+.+.|+.++.-
T Consensus 1 k~~~Igvi~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~~ 38 (313)
T 3m9w_A 1 KEVKIGMAIDDL--RLERWQKDRDIFVKKAESLGAKVFVQ 38 (313)
T ss_dssp --CEEEEEESCC--SSSTTHHHHHHHHHHHHHTSCEEEEE
T ss_pred CCcEEEEEeCCC--CChHHHHHHHHHHHHHHHcCCEEEEE
Confidence 346788886543 24555666667777777888887753
No 118
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=37.54 E-value=63 Score=28.66 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=29.8
Q ss_pred HhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 113 AKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 113 v~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
.+..|+|||.-| .-||+|-+.++.+.- ...+|||||-+.
T Consensus 99 ~~~~dG~VItHG-TDTmeeTA~~Ls~~l-~~~~kPVVlTGA 137 (358)
T 2him_A 99 YDDYDGFVILHG-TDTMAYTASALSFML-ENLGKPVIVTGS 137 (358)
T ss_dssp GGGCSEEEEECC-STTHHHHHHHHHHHE-ETCCSCEEEECC
T ss_pred HhcCCeEEEecC-chHHHHHHHHHHHHH-hcCCCCEEEeCC
Confidence 346799999975 799999998886542 225799999764
No 119
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=37.39 E-value=1.9e+02 Score=24.45 Aligned_cols=50 Identities=16% Similarity=0.112 Sum_probs=30.9
Q ss_pred HHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhhcCCccccccc--ccccc
Q 027287 162 TFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEYFPQHERVASK--LSWEN 212 (225)
Q Consensus 162 ~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~~--~~w~~ 212 (225)
..+-+++++|-+++......+-.++..++++.+.+-... .+...| ++|..
T Consensus 286 ~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~-Gr~~GK~v~~~~~ 337 (343)
T 3gaz_A 286 READALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDV-PRQRGKIAITVEG 337 (343)
T ss_dssp HHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTC-CCCSSBCEEECC-
T ss_pred HHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCc-ccccceEEEEecc
Confidence 334457788888754332467789999999999875432 333333 55543
No 120
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=37.20 E-value=1.5e+02 Score=24.62 Aligned_cols=43 Identities=28% Similarity=0.276 Sum_probs=27.4
Q ss_pred hhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCc
Q 027287 114 KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 157 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w 157 (225)
+...+.|+|+||. |...+++.+.-..-++.=..|.+++.+.||
T Consensus 37 ~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (251)
T 3tx2_A 37 ERGKAMIVLTGGG-TGIALLKHLRDVASGLDWTNVHVFWGDDRY 79 (251)
T ss_dssp HHSCEEEEECCSH-HHHHHHHHHHHHHTTSCGGGEEEEESEEES
T ss_pred hCCCEEEEECCCc-hHHHHHHHHHhhccCCCCceeEEEeeeecc
Confidence 4678999999995 666666666532211222456677776666
No 121
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=37.19 E-value=23 Score=30.77 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=24.0
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
++|+|++|......+.=...|.++.+.|-+.||.++
T Consensus 4 kkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~ 39 (357)
T 4fu0_A 4 KKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDII 39 (357)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEE
Confidence 578886443333233334567888899988999876
No 122
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=36.90 E-value=67 Score=26.15 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=31.2
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC---ccHHHHHHHHHHhcCCeEEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS---VGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~---~GlM~a~a~gA~~aGG~viGI 81 (225)
+.++|-|.|+++ + ..+.+++.|+++|+.|+.-+.. ..-.+.+.+...+.|+++..+
T Consensus 10 ~~k~vlVTGas~-G-------IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (262)
T 3ksu_A 10 KNKVIVIAGGIK-N-------LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68 (262)
T ss_dssp TTCEEEEETCSS-H-------HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEE
Confidence 345666676554 2 2467888889999998864321 112233333333446666555
No 123
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=36.78 E-value=68 Score=28.19 Aligned_cols=74 Identities=14% Similarity=0.107 Sum_probs=41.5
Q ss_pred EeecCCH-HHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccc
Q 027287 99 VKPVADM-HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNA 177 (225)
Q Consensus 99 ~~~~~~m-~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~ 177 (225)
+.+...+ ...-..++..||++|.= +|++. .|+. ..++|+|++...+-+..+ ++.|
T Consensus 284 v~l~~~l~~~~~~~l~~~ad~vv~~---SGg~~--~EA~------a~g~PvV~~~~~~~~~e~-------v~~g------ 339 (403)
T 3ot5_A 284 IHLIEPLDAIDFHNFLRKSYLVFTD---SGGVQ--EEAP------GMGVPVLVLRDTTERPEG-------IEAG------ 339 (403)
T ss_dssp EEEECCCCHHHHHHHHHHEEEEEEC---CHHHH--HHGG------GTTCCEEECCSSCSCHHH-------HHHT------
T ss_pred EEEeCCCCHHHHHHHHHhcCEEEEC---CccHH--HHHH------HhCCCEEEecCCCcchhh-------eeCC------
Confidence 4444433 23555677899987533 35555 3444 258999998322334332 2223
Q ss_pred cCcEEEc-CCHHHHHHHHHhhc
Q 027287 178 RHIIVSA-PNAKELMNKMEEYF 198 (225)
Q Consensus 178 ~~~i~~~-~d~ee~~~~l~~~~ 198 (225)
..+.+ .|++++.+.+.+..
T Consensus 340 --~~~lv~~d~~~l~~ai~~ll 359 (403)
T 3ot5_A 340 --TLKLIGTNKENLIKEALDLL 359 (403)
T ss_dssp --SEEECCSCHHHHHHHHHHHH
T ss_pred --cEEEcCCCHHHHHHHHHHHH
Confidence 22334 48888888777654
No 124
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=36.68 E-value=11 Score=31.29 Aligned_cols=41 Identities=29% Similarity=0.352 Sum_probs=23.2
Q ss_pred ceEEE-EeCCCCCC---C-hHHHHHHHHHHHHHHhCCCeEEEcCCC
Q 027287 20 NRICV-FCGSSAGK---K-STYKDAAIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 20 ~~V~V-fggs~~~~---~-~~~~~~A~~lG~~LA~~G~~lv~GGg~ 60 (225)
++|.| ||||.... + +...+.++++..+.......||.|||+
T Consensus 20 k~iViKlGGs~l~~~~~~~~~i~~~~~~i~~l~~g~~vViV~GgG~ 65 (244)
T 2brx_A 20 MRIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSEDHEVAVVVGGGK 65 (244)
T ss_dssp CEEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHHHSEEEEEECCHH
T ss_pred cEEEEEechhhcCCCCCCHHHHHHHHHHHHHHhCCCeEEEEECccH
Confidence 44555 77776652 2 345556666665543223467798864
No 125
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=36.40 E-value=1.1e+02 Score=25.70 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=22.3
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIP 83 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP 83 (225)
...+|+|++ +|+=.+++.-|...|.+|+++-.
T Consensus 151 ~~vlI~Ga~-g~iG~~~~~~a~~~Ga~Vi~~~~ 182 (336)
T 4b7c_A 151 ETVVISGAA-GAVGSVAGQIARLKGCRVVGIAG 182 (336)
T ss_dssp CEEEESSTT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 456778873 25555567777788889998854
No 126
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=36.37 E-value=1.2e+02 Score=25.40 Aligned_cols=68 Identities=18% Similarity=0.269 Sum_probs=41.3
Q ss_pred HHHhhCCEEEEec--CCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCHH
Q 027287 111 EMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAK 188 (225)
Q Consensus 111 ~mv~~sDa~Ivlp--GG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~e 188 (225)
-++..||++|.-. .|+|+- +.|+++ .++|+|..+..|.-+ ++.+.....++-.+|++
T Consensus 280 ~~~~~adv~v~ps~~e~~~~~--~~EAma------~G~PvI~~~~~~~~e-------------~v~~~~~g~~~~~~d~~ 338 (394)
T 2jjm_A 280 ELLAMSDLMLLLSEKESFGLV--LLEAMA------CGVPCIGTRVGGIPE-------------VIQHGDTGYLCEVGDTT 338 (394)
T ss_dssp HHHHTCSEEEECCSCCSCCHH--HHHHHH------TTCCEEEECCTTSTT-------------TCCBTTTEEEECTTCHH
T ss_pred HHHHhCCEEEeccccCCCchH--HHHHHh------cCCCEEEecCCChHH-------------HhhcCCceEEeCCCCHH
Confidence 4668899888643 244432 455553 689999988654321 22222233444445999
Q ss_pred HHHHHHHhhcC
Q 027287 189 ELMNKMEEYFP 199 (225)
Q Consensus 189 e~~~~l~~~~~ 199 (225)
++.+.|.+...
T Consensus 339 ~la~~i~~l~~ 349 (394)
T 2jjm_A 339 GVADQAIQLLK 349 (394)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99888877643
No 127
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=36.34 E-value=1.2e+02 Score=21.80 Aligned_cols=37 Identities=8% Similarity=-0.142 Sum_probs=19.4
Q ss_pred HhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 113 AKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 113 v~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
+..+|++|+..|-.-+- +..+....+++ ...|+....
T Consensus 68 ~~~~d~vi~~~~~~~~n--~~~~~~a~~~~--~~~iia~~~ 104 (141)
T 3llv_A 68 LEGVSAVLITGSDDEFN--LKILKALRSVS--DVYAIVRVS 104 (141)
T ss_dssp CTTCSEEEECCSCHHHH--HHHHHHHHHHC--CCCEEEEES
T ss_pred cccCCEEEEecCCHHHH--HHHHHHHHHhC--CceEEEEEc
Confidence 35789999888732221 22233334555 455655443
No 128
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=36.22 E-value=76 Score=23.65 Aligned_cols=39 Identities=28% Similarity=0.362 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHh----CCCeEE---EcCC-CccHHHHHHHHHHhcCC
Q 027287 38 DAAIELGKELVA----RNIDLV---YGGG-SVGLMGLISQAVYDGGR 76 (225)
Q Consensus 38 ~~A~~lG~~LA~----~G~~lv---~GGg-~~GlM~a~a~gA~~aGG 76 (225)
+.|+.+|++||+ .|+.=| -||. +.|-..|++++|.++|-
T Consensus 68 ~AA~~vG~llA~Ral~~GI~~vvfDrgg~~yhGrV~Ala~~are~Gl 114 (116)
T 3r8s_O 68 DAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGL 114 (116)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCEEECTTSCSSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHhCC
Confidence 678999999997 354322 2442 46999999999999884
No 129
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=36.21 E-value=67 Score=29.22 Aligned_cols=29 Identities=28% Similarity=0.151 Sum_probs=25.2
Q ss_pred CeEEEcCCCccHHHHHHHHHHh-cCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYD-GGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~-aGG~viGI 81 (225)
..|||||+. |+=.|+++...+ .|..|+++
T Consensus 63 vaLVTGASs-GIG~AiA~~LA~~~GA~Vv~~ 92 (422)
T 3s8m_A 63 KVLVIGASS-GYGLASRITAAFGFGADTLGV 92 (422)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEEECCCh-HHHHHHHHHHHHhCCCEEEEE
Confidence 468999985 999999999888 89998877
No 130
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=36.14 E-value=88 Score=24.25 Aligned_cols=13 Identities=0% Similarity=-0.046 Sum_probs=8.8
Q ss_pred HhhCCEEEEecCC
Q 027287 113 AKHSDAFIALPGG 125 (225)
Q Consensus 113 v~~sDa~IvlpGG 125 (225)
++..|++|...|.
T Consensus 71 ~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 71 VTNAEVVFVGAME 83 (221)
T ss_dssp HTTCSEEEESCCC
T ss_pred HcCCCEEEEcCCC
Confidence 3567777777764
No 131
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=36.02 E-value=94 Score=24.67 Aligned_cols=65 Identities=14% Similarity=0.071 Sum_probs=0.0
Q ss_pred hhhhHHHHHhhhcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 2 EMEMEMEMEMEMNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+|-|++ +.-+.++|.|.|+++. ..+.+++.|+++|+.|+.-+-..---+.+.+...+.++.+..+
T Consensus 3 ~~~~~~-------~~l~~k~vlItGasgg--------iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 67 (260)
T 3awd_A 3 HMYMEK-------LRLDNRVAIVTGGAQN--------IGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSV 67 (260)
T ss_dssp -CTTGG-------GCCTTCEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccccc-------cCCCCCEEEEeCCCch--------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
No 132
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=35.99 E-value=68 Score=27.30 Aligned_cols=32 Identities=25% Similarity=0.222 Sum_probs=22.7
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIP 83 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP 83 (225)
...+|+|++ +|+=.+++.-|...|.+|+++-.
T Consensus 171 ~~vlV~Ga~-ggiG~~~~~~a~~~Ga~V~~~~~ 202 (347)
T 2hcy_A 171 HWVAISGAA-GGLGSLAVQYAKAMGYRVLGIDG 202 (347)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCcEEEEcC
Confidence 457889984 25555667778888889988753
No 133
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.91 E-value=1.4e+02 Score=22.40 Aligned_cols=72 Identities=15% Similarity=0.073 Sum_probs=33.7
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHH--HHHHHHHhhCCEEEEecCCcc
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMH--QRKAEMAKHSDAFIALPGGYG 127 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~--~Rk~~mv~~sDa~IvlpGG~G 127 (225)
.+|+||. +++=.++++...+.|-.|+++.-+.....+..... .+.+ ..++. +.-...++..|++|.+.|...
T Consensus 6 ilVtGat-G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~-~~D~~~~~~~~~~~~~~d~vi~~a~~~~ 79 (206)
T 1hdo_A 6 IAIFGAT-GQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP-AHVV-VGDVLQAADVDKTVAGQDAVIVLLGTRN 79 (206)
T ss_dssp EEEESTT-SHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCC-SEEE-ESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred EEEEcCC-cHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCc-eEEE-EecCCCHHHHHHHHcCCCEEEECccCCC
Confidence 4566664 35555566666666666665532211101110111 1222 22332 222234467899998887654
No 134
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=35.79 E-value=36 Score=23.24 Aligned_cols=26 Identities=12% Similarity=0.137 Sum_probs=18.8
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
+.|.|||.+.. .+...++.|.+.||.
T Consensus 54 ~~ivvyC~~g~--------rs~~a~~~L~~~G~~ 79 (94)
T 1wv9_A 54 RPLLLVCEKGL--------LSQVAALYLEAEGYE 79 (94)
T ss_dssp SCEEEECSSSH--------HHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCCC--------hHHHHHHHHHHcCCc
Confidence 78999997641 355667777788887
No 135
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=35.65 E-value=35 Score=26.01 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=19.5
Q ss_pred eEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 21 RICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 21 ~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
+|.|+.+|..++.. +.|+.+++.|.+.|+.
T Consensus 2 kv~IvY~S~tGnT~---~~A~~ia~~l~~~g~~ 31 (161)
T 3hly_A 2 SVLIGYLSDYGYSD---RLSQAIGRGLVKTGVA 31 (161)
T ss_dssp CEEEEECTTSTTHH---HHHHHHHHHHHHTTCC
T ss_pred EEEEEEECCChHHH---HHHHHHHHHHHhCCCe
Confidence 45666677776533 4677788877777654
No 136
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=35.53 E-value=60 Score=22.98 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=22.6
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
.+-+.|.|+|.+.. .+...++.|.+.||..++
T Consensus 54 ~~~~~ivv~C~~G~--------rS~~aa~~L~~~G~~~~~ 85 (103)
T 3iwh_A 54 NKNEIYYIVCAGGV--------RSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp CTTSEEEEECSSSS--------HHHHHHHHHHTTTCEEEE
T ss_pred cCCCeEEEECCCCH--------HHHHHHHHHHHcCCCEEE
Confidence 34567999996542 234567788899999886
No 137
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=35.40 E-value=1.4e+02 Score=25.27 Aligned_cols=32 Identities=31% Similarity=0.382 Sum_probs=21.7
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPK 84 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~ 84 (225)
...+|+|+|..|+ ++..-|+..|. +|+++-.+
T Consensus 169 ~~VlV~GaG~vG~--~~~q~a~~~Ga~~Vi~~~~~ 201 (348)
T 2d8a_A 169 KSVLITGAGPLGL--LGIAVAKASGAYPVIVSEPS 201 (348)
T ss_dssp CCEEEECCSHHHH--HHHHHHHHTTCCSEEEECSC
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCCEEEEECCC
Confidence 4678889864444 45566777787 89888543
No 138
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=35.34 E-value=59 Score=26.96 Aligned_cols=68 Identities=22% Similarity=0.195 Sum_probs=35.8
Q ss_pred CeEEEcCC---------------CccHHH-HHHHHHHhcCCeEEEE-eCCccccCCCCCCCCceEeecCCH---HHHHHH
Q 027287 52 IDLVYGGG---------------SVGLMG-LISQAVYDGGRHVIGV-IPKTLMPREITGETVGEVKPVADM---HQRKAE 111 (225)
Q Consensus 52 ~~lv~GGg---------------~~GlM~-a~a~gA~~aGG~viGI-iP~~~~~~e~~~~~~~~~~~~~~m---~~Rk~~ 111 (225)
..|||||+ . |-|+ ++++.+.+.|..|+-+ .|.... . +...+.+-+.+. .+.-.-
T Consensus 10 ~vlVTgG~T~E~iDpVR~itN~SS-g~iG~aiA~~~~~~Ga~V~l~~~~~~l~---~--~~g~~~~dv~~~~~~~~~v~~ 83 (226)
T 1u7z_A 10 NIMITAGPTREPLDPVRYISDHSS-GKMGFAIAAAAARRGANVTLVSGPVSLP---T--PPFVKRVDVMTALEMEAAVNA 83 (226)
T ss_dssp EEEEEESBCEEESSSSEEEEECCC-SHHHHHHHHHHHHTTCEEEEEECSCCCC---C--CTTEEEEECCSHHHHHHHHHH
T ss_pred EEEEECCCCCcccCceeeccCCCc-cHHHHHHHHHHHHCCCEEEEEECCcccc---c--CCCCeEEccCcHHHHHHHHHH
Confidence 46788885 3 5454 5577777888888766 233211 1 111233334443 222212
Q ss_pred HHhhCCEEEEecCC
Q 027287 112 MAKHSDAFIALPGG 125 (225)
Q Consensus 112 mv~~sDa~IvlpGG 125 (225)
.....|++|-..|-
T Consensus 84 ~~~~~Dili~~Aav 97 (226)
T 1u7z_A 84 SVQQQNIFIGCAAV 97 (226)
T ss_dssp HGGGCSEEEECCBC
T ss_pred hcCCCCEEEECCcc
Confidence 23457888877663
No 139
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=35.27 E-value=85 Score=26.14 Aligned_cols=43 Identities=19% Similarity=0.155 Sum_probs=27.3
Q ss_pred HHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEe
Q 027287 40 AIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVI 82 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIi 82 (225)
-+.+++.||++|..|+.-+-..--.+.+++...+.|++++.+-
T Consensus 20 G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 20 GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3567777888888888655443333444555556677777763
No 140
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=35.20 E-value=26 Score=30.18 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=27.0
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
+++|+|++|......+.=...|..+.+.|-+.||.++.
T Consensus 3 ~~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~ 40 (346)
T 3se7_A 3 HMKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFY 40 (346)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEE
Confidence 44677755544444555567889999999999999873
No 141
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=35.07 E-value=29 Score=28.56 Aligned_cols=35 Identities=14% Similarity=0.041 Sum_probs=20.4
Q ss_pred EeCCCCC-----CChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 25 FCGSSAG-----KKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 25 fggs~~~-----~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
+|||... ..+...+.|+++..+.......||.|||
T Consensus 8 lGGs~l~~~~~~~~~~~~~~~~~i~~l~~~~~vVlVhgGg 47 (251)
T 2ako_A 8 VGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVTSAA 47 (251)
T ss_dssp ECHHHHBCSSSBCHHHHHHHHHHHHHHHHHSEEEEEECCH
T ss_pred eCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence 6666544 1234555666666654443456788887
No 142
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=34.88 E-value=2.1e+02 Score=24.19 Aligned_cols=83 Identities=17% Similarity=0.134 Sum_probs=41.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCC-CCCceEeec---CCHHHHHHHHH-----hhCCEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITG-ETVGEVKPV---ADMHQRKAEMA-----KHSDAFIA 121 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~-~~~~~~~~~---~~m~~Rk~~mv-----~~sDa~Iv 121 (225)
...+|+|+|..|+ ++..-|+..|.+|+++-.+... .+... -..+..+.. .++.++-.... ...|++|-
T Consensus 170 ~~VlV~GaG~vG~--~a~qla~~~Ga~Vi~~~~~~~~-~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid 246 (352)
T 1e3j_A 170 TTVLVIGAGPIGL--VSVLAAKAYGAFVVCTARSPRR-LEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 246 (352)
T ss_dssp CEEEEECCSHHHH--HHHHHHHHTTCEEEEEESCHHH-HHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCEEEEEcCCHHH-HHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEE
Confidence 4567788764444 3455677778888887433210 01000 011222222 23333322222 24688888
Q ss_pred ecCCcccHHHHHHHH
Q 027287 122 LPGGYGTLEELLEVI 136 (225)
Q Consensus 122 lpGG~GTL~Ei~~a~ 136 (225)
..|+.-|+++.+..+
T Consensus 247 ~~g~~~~~~~~~~~l 261 (352)
T 1e3j_A 247 CSGNEKCITIGINIT 261 (352)
T ss_dssp CSCCHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHH
Confidence 877765666655443
No 143
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=34.81 E-value=54 Score=28.88 Aligned_cols=48 Identities=23% Similarity=0.300 Sum_probs=33.8
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC-----CCchHHHHHHH
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLTFID 165 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~-----g~w~~l~~~l~ 165 (225)
..|+|||..| .-||+|-..++.+.- ..+|||||-+.- --.|...+++.
T Consensus 90 ~~dGvVItHG-TDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~ 142 (337)
T 4pga_A 90 DVDGIVITHG-TDTLEETAYFLNLVQ--KTDKPIVVVGSMRPGTAMSADGMLNLYN 142 (337)
T ss_dssp TCSEEEEECC-STTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred CCCeEEEECC-CccHHHHHHHHHHHc--CCCCCEEEeCCCCCCCCCCchhHHHHHH
Confidence 4789998875 799999998887643 358999997541 13455555544
No 144
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=34.72 E-value=40 Score=28.08 Aligned_cols=17 Identities=0% Similarity=0.075 Sum_probs=10.2
Q ss_pred HHHHHHHHhCCCeEEEc
Q 027287 41 IELGKELVARNIDLVYG 57 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~G 57 (225)
+.+++.|+++|+.|+.-
T Consensus 16 ~aia~~la~~Ga~V~~~ 32 (247)
T 3ged_A 16 KQICLDFLEAGDKVCFI 32 (247)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 45566666667666543
No 145
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=34.58 E-value=1e+02 Score=25.22 Aligned_cols=30 Identities=27% Similarity=0.436 Sum_probs=24.3
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 29 k~vlVTGas~-gIG~aia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAAG-GIGGAVVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 4678899874 88888999888888887765
No 146
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.52 E-value=1.4e+02 Score=24.11 Aligned_cols=55 Identities=20% Similarity=0.261 Sum_probs=32.4
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.++|-|.|+++. ..+.+++.|+++|+.|+..+-...--+.+.+...+.|+.+..+
T Consensus 11 ~k~vlVTGas~g--------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 65 (264)
T 3ucx_A 11 DKVVVISGVGPA--------LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSV 65 (264)
T ss_dssp TCEEEEESCCTT--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEECCCcH--------HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 346777766542 2456788888999998866543223333344444456666555
No 147
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=34.31 E-value=81 Score=27.71 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=28.8
Q ss_pred hhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 114 KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
...|+|||..| .-||+|-..++.+.- ..+|||||-+.
T Consensus 87 ~~~dGvVItHG-TDTm~~TA~~L~~~l--~~~kPVVlTGa 123 (334)
T 3nxk_A 87 EGIDGVVITHG-TDTMEETAYFLNLTI--KSDKPVVLVGA 123 (334)
T ss_dssp TTCCEEEEECC-STTHHHHHHHHHHHC--CCCSCEEEECC
T ss_pred cCCCeEEEECC-CchHHHHHHHHHHHc--CCCCCEEEECC
Confidence 45789998874 799999998887543 35899999763
No 148
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=33.86 E-value=1.6e+02 Score=24.05 Aligned_cols=53 Identities=15% Similarity=0.187 Sum_probs=28.3
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+.. ---+...+...+.++.+..+
T Consensus 32 k~~lVTGas~-G-------IG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~ 84 (273)
T 3uf0_A 32 RTAVVTGAGS-G-------IGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAV 84 (273)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEeCCCc-H-------HHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEE
Confidence 4555665443 1 2356777777888877655433 32333344344455555554
No 149
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=33.79 E-value=1.8e+02 Score=23.04 Aligned_cols=20 Identities=10% Similarity=0.064 Sum_probs=12.9
Q ss_pred HHHHHHHHHhCCCeEEEcCC
Q 027287 40 AIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg 59 (225)
.+.+++.|+++|+.|+.-+.
T Consensus 22 G~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 22 GQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 35667777777777665443
No 150
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=33.76 E-value=1.7e+02 Score=24.62 Aligned_cols=142 Identities=13% Similarity=0.229 Sum_probs=67.1
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCCCCCceEeec--CCHHHHHHHHH-hhCCEEEEecCCc
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITGETVGEVKPV--ADMHQRKAEMA-KHSDAFIALPGGY 126 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~~~~~~~~~~--~~m~~Rk~~mv-~~sDa~IvlpGG~ 126 (225)
...+|+|+|..|+ ++..-|+..|. +|+++-.+... .+......+.++.. .++.++-..+. ...|++|-..|+.
T Consensus 166 ~~VlV~GaG~vG~--~~~q~a~~~Ga~~Vi~~~~~~~~-~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 166 KSVLITGAGPIGL--MAAMVVRASGAGPILVSDPNPYR-LAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp SCEEEECCSHHHH--HHHHHHHHTTCCSEEEECSCHHH-HGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCCEEEEECCCHHH-HHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 4678899864454 45566777887 89998543211 11111111222221 23433222121 2357777777775
Q ss_pred ccHHHHHHHHHH----HHhCCCCCc-------------EEEEeCCC--CchHHHHHHHHHHHcCCCCccc-cCcEEEcCC
Q 027287 127 GTLEELLEVITW----AQLGIHDKP-------------VGLLNVDG--YYNSLLTFIDKAVEEGFISPNA-RHIIVSAPN 186 (225)
Q Consensus 127 GTL~Ei~~a~~~----~qlg~~~kP-------------iill~~~g--~w~~l~~~l~~~~~~gfi~~~~-~~~i~~~~d 186 (225)
-++++....+.- ..+|....+ +-+.+... ..+.+.+ +-+++++|-++-+. ....+-.++
T Consensus 243 ~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~-~~~l~~~g~~~~~~~i~~~~~l~~ 321 (343)
T 2dq4_A 243 AAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQ-GTALVYSGRVDLSPLLTHRLPLSR 321 (343)
T ss_dssp HHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHH-HHHHHHHTSSCCGGGEEEEEEGGG
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHH-HHHHHHcCCCChHHheeEEecHHH
Confidence 666655544310 001111111 11122111 1233333 33455667654222 234566778
Q ss_pred HHHHHHHHHh
Q 027287 187 AKELMNKMEE 196 (225)
Q Consensus 187 ~ee~~~~l~~ 196 (225)
..++++.+++
T Consensus 322 ~~~A~~~~~~ 331 (343)
T 2dq4_A 322 YREAFGLLAS 331 (343)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888887765
No 151
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=33.76 E-value=13 Score=28.75 Aligned_cols=35 Identities=20% Similarity=0.399 Sum_probs=19.8
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
...+++|.|+.+|..++. .+.|+++++.|.+.|+.
T Consensus 6 ~~~~~ki~I~Y~S~tGnT---~~~A~~ia~~l~~~g~~ 40 (167)
T 1ykg_A 6 AAEMPGITIISASQTGNA---RRVAEALRDDLLAAKLN 40 (167)
T ss_dssp ------CEEEEECSSSHH---HHHHHHHHHHHHHHTCC
T ss_pred CCCCCeEEEEEECCchHH---HHHHHHHHHHHHHCCCc
Confidence 344566777767887753 35677888888766553
No 152
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=33.74 E-value=1.3e+02 Score=23.62 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=22.4
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~ 60 (225)
+++|-|.|+++. ..+.+++.|+++|+.|+..+-.
T Consensus 2 ~k~vlITGas~g--------IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG--------IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH--------HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEeCC
Confidence 456667765542 3457788888889987765543
No 153
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=33.00 E-value=64 Score=26.64 Aligned_cols=67 Identities=18% Similarity=0.109 Sum_probs=45.1
Q ss_pred HHhhhcccCCcceEEEEeCCCCCCChH----------------HHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHH
Q 027287 9 MEMEMNNQSKFNRICVFCGSSAGKKST----------------YKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVY 72 (225)
Q Consensus 9 ~~~~~~~~~~~~~V~Vfggs~~~~~~~----------------~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~ 72 (225)
+..+....+...+|+|++......+-. -.+.+++.-+.|.++|+.+|-||+. +++-|.
T Consensus 96 l~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~------~~~~A~ 169 (225)
T 2pju_A 96 LQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGL------ITDLAE 169 (225)
T ss_dssp HHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHH------HHHHHH
T ss_pred HHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHH------HHHHHH
Confidence 344555666667899997666542101 0235667778888899999999753 467788
Q ss_pred hcCCeEEEE
Q 027287 73 DGGRHVIGV 81 (225)
Q Consensus 73 ~aGG~viGI 81 (225)
+.|-..+=+
T Consensus 170 ~~Gl~~vlI 178 (225)
T 2pju_A 170 EAGMTGIFI 178 (225)
T ss_dssp HTTSEEEES
T ss_pred HcCCcEEEE
Confidence 888776554
No 154
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=32.98 E-value=2.1e+02 Score=23.63 Aligned_cols=29 Identities=31% Similarity=0.426 Sum_probs=24.5
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.+.++...+.|.+|+..
T Consensus 13 ~alVTGas~-GIG~aia~~la~~Ga~Vv~~ 41 (242)
T 4b79_A 13 QVLVTGGSS-GIGAAIAMQFAELGAEVVAL 41 (242)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 568899985 99999999988999988766
No 155
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=32.98 E-value=54 Score=24.45 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHh----CCCeEE---EcC-CCccHHHHHHHHHHhcCC
Q 027287 37 KDAAIELGKELVA----RNIDLV---YGG-GSVGLMGLISQAVYDGGR 76 (225)
Q Consensus 37 ~~~A~~lG~~LA~----~G~~lv---~GG-g~~GlM~a~a~gA~~aGG 76 (225)
.+.|+.+|++||+ .|+.=| -|| -+.|-..|++++|.++|-
T Consensus 63 ~~AA~~vG~llA~ra~~~GI~~vvfDrgg~~yhGrV~Ala~~are~GL 110 (112)
T 3v2d_S 63 TEVARQVGRALAEKALALGIKQVAFDRGPYKYHGRVKALAEGAREGGL 110 (112)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCBCEEECTTSCSCSSTTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHcCC
Confidence 3678899999987 454322 354 236899999999999884
No 156
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=32.81 E-value=93 Score=26.43 Aligned_cols=47 Identities=19% Similarity=0.063 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHH-HHHHHhc-CCeEEEEe
Q 027287 34 STYKDAAIELGKELVARNIDLVYGGGSVGLMGLI-SQAVYDG-GRHVIGVI 82 (225)
Q Consensus 34 ~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~-a~gA~~a-GG~viGIi 82 (225)
+...+.+.+..+.|.+.|...+-=+++ -+-++ .+...+. .-.++||+
T Consensus 69 e~i~~~~~~~~~~L~~~g~d~IVIACN--Ta~~~al~~lr~~~~iPvigii 117 (274)
T 3uhf_A 69 DTIIKFCLEALDFFEQFQIDMLIIACN--TASAYALDALRAKAHFPVYGVI 117 (274)
T ss_dssp HHHHHHHHHHHHHHTTSCCSEEEECCH--HHHHHSHHHHHHHCSSCEECSH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEeCC--ChhHHHHHHHHHhcCCCEEcCC
Confidence 456677778888888888888877765 23332 2333222 45666654
No 157
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=32.77 E-value=63 Score=28.18 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=25.0
Q ss_pred CCCeEEEcCCC----------------ccHHHHH-HHHHHhcCCeEEEE
Q 027287 50 RNIDLVYGGGS----------------VGLMGLI-SQAVYDGGRHVIGV 81 (225)
Q Consensus 50 ~G~~lv~GGg~----------------~GlM~a~-a~gA~~aGG~viGI 81 (225)
+...|||+||+ .|-||++ ++.|++.|..|+=|
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv 85 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFL 85 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 34478899874 1999987 77888899998877
No 158
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=32.74 E-value=69 Score=29.29 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=34.6
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC-----CCchHHHHHHH
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLTFID 165 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~-----g~w~~l~~~l~ 165 (225)
..|+|||..| .-||+|-+.++.+.- ..+|||||-+.- --.|...+++.
T Consensus 167 ~~DG~VItHG-TDTMeeTA~~Lsl~l--~~~KPVVlTGAqrP~~~~~sDg~~NL~~ 219 (435)
T 2d6f_A 167 GADGVVVAHG-TDTMHYTSAALSFML--RTPVPVVFTGAQRSSDRPSSDASLNIQC 219 (435)
T ss_dssp TCSEEEEECC-TTTHHHHHHHHHHHE--ECSSCEEEECCSSCTTSTTCTHHHHHHH
T ss_pred CCCeEEEEcC-cchHHHHHHHHHHHh--CCCCCEEEECCCCCCCCCCcchHHHHHH
Confidence 5799999975 799999998887653 358999997642 13445555554
No 159
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=32.56 E-value=56 Score=27.15 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=23.8
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE-EcCCC
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV-YGGGS 60 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv-~GGg~ 60 (225)
..+..++||.|+|... .+ -+.=+.|.++||.|. ||.|.
T Consensus 22 p~~~Lr~avVCaSN~N-RS------MEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 22 PSSPLRVAVVSSSNQN-RS------MEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp ----CEEEEEESSSSS-HH------HHHHHHHHHTTCEEEEEECSS
T ss_pred CCCCCeEEEECCCCcc-hh------HHHHHHHHHCCCceEeecCCC
Confidence 3455679999987753 12 234456789999998 56554
No 160
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=32.52 E-value=1e+02 Score=25.18 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=23.9
Q ss_pred HHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 40 AIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.+.+++.|+++|+.|+.-+-..---+.+.+...+.|+.+..+
T Consensus 39 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 80 (271)
T 4ibo_A 39 GRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAV 80 (271)
T ss_dssp HHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 456788888899998866543222233333333445555444
No 161
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=32.34 E-value=16 Score=30.55 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=19.3
Q ss_pred cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCch
Q 027287 126 YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 126 ~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~ 158 (225)
.++-|+++..++ ..++ ..+=+++-+.+|.|+
T Consensus 144 ~~~~D~~Aa~lA-~~l~-Ad~li~ltdvdGv~~ 174 (249)
T 3ll5_A 144 IYSGDDIMADMA-ELLK-PDVAVFLTDVDGIYS 174 (249)
T ss_dssp EECHHHHHHHHH-HHHC-CSEEEEEESSSSCBS
T ss_pred eecHHHHHHHHH-HhcC-CCEEEEEeCCCccCC
Confidence 467777776654 2333 345566667888876
No 162
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=32.31 E-value=86 Score=28.41 Aligned_cols=29 Identities=24% Similarity=0.188 Sum_probs=24.6
Q ss_pred CeEEEcCCCccHHHHHHHHHHh-cCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYD-GGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~-aGG~viGI 81 (225)
..|||||+. |+=.|+++...+ .|.+|+.+
T Consensus 49 vaLVTGas~-GIG~AiA~~LA~g~GA~Vv~~ 78 (405)
T 3zu3_A 49 RVLVIGAST-GYGLAARITAAFGCGADTLGV 78 (405)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEEeCcch-HHHHHHHHHHHHhcCCEEEEE
Confidence 368999985 999999998888 89988876
No 163
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=32.16 E-value=94 Score=25.50 Aligned_cols=19 Identities=21% Similarity=0.330 Sum_probs=11.7
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+.-+
T Consensus 37 G~aia~~la~~G~~V~~~~ 55 (279)
T 3sju_A 37 GLAVARTLAARGIAVYGCA 55 (279)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3456666677777766444
No 164
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=32.15 E-value=86 Score=27.30 Aligned_cols=36 Identities=25% Similarity=0.315 Sum_probs=28.6
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
..|+|||..| .-||+|-..++.+.- . .+|||||-+.
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~l-~-~~kPVVlTGA 120 (327)
T 1o7j_A 85 DVDGVVITHG-TDTVEESAYFLHLTV-K-SDKPVVFVAA 120 (327)
T ss_dssp TCCEEEEECC-STTHHHHHHHHHHHC-C-CCSCEEEECC
T ss_pred CCCEEEEecC-chhHHHHHHHHHHHh-C-CCCCEEEeCC
Confidence 4689999975 799999998887542 3 6899999754
No 165
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=32.14 E-value=1.1e+02 Score=28.12 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=64.9
Q ss_pred hCCCeEEEcCCCccHHHHHHHHHHhcC-CeEEEEeCCccccCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecC-Cc
Q 027287 49 ARNIDLVYGGGSVGLMGLISQAVYDGG-RHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPG-GY 126 (225)
Q Consensus 49 ~~G~~lv~GGg~~GlM~a~a~gA~~aG-G~viGIiP~~~~~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpG-G~ 126 (225)
..|+.+|.||...|.---++++|+.+| |.|.-+.|..........+ ++.+... +.+..|++++=|| |-
T Consensus 235 ~~G~vlvigGs~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~~~~~p---e~m~~~~-------~~~~~~a~~iGPGlG~ 304 (475)
T 3k5w_A 235 DYGHAHVLLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKPL---ELVFCEN-------FPNLLSAFALGMGLEN 304 (475)
T ss_dssp GGCEEEEEECSSHHHHHHHHHHHHHTTCSEEEEEESSSCCSSSSSCT---TSEEESS-------CCSSCSEEEECTTCSS
T ss_pred CCCeEEEEeCCCCcHHHHHHHHHHHhCCCeEEEeccHHHhhcccCCh---hheeehh-------hccCCCEEEEcCCCCC
Confidence 369999999876666666788888876 6666666755211100011 2222221 2257899888887 33
Q ss_pred ccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHh
Q 027287 127 GTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEE 196 (225)
Q Consensus 127 GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~ 196 (225)
..- ++..++ + .+ |+| ++-++.+.. . +. ..++ ...+++.++.|+-..+..
T Consensus 305 ~~~-~l~~~l---~---~~-p~V-lDADaL~~~--~----~~--~~~~----~~~VlTPh~~E~~rL~g~ 353 (475)
T 3k5w_A 305 IPK-DFNRWL---E---LA-PCV-LDAGVFYHK--E----IL--QALE----KEAVLTPHPKEFLSLLNL 353 (475)
T ss_dssp CCT-THHHHH---H---HS-CEE-EEGGGGGSG--G----GG--TTTT----SSEEEECCHHHHHHHHHH
T ss_pred CHH-HHHHHH---h---cC-CEE-EECcccCCc--h----hh--hccC----CCEEECCCHHHHHHHhCC
Confidence 221 232222 2 24 876 476666421 1 10 1111 236789999998877654
No 166
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=32.00 E-value=41 Score=25.91 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=21.8
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDL 54 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 54 (225)
|++|.|+.+|..++ -.+.|+.+.+.|.+.|+.+
T Consensus 5 M~kilii~~S~~g~---T~~la~~i~~~l~~~g~~v 37 (200)
T 2a5l_A 5 SPYILVLYYSRHGA---TAEMARQIARGVEQGGFEA 37 (200)
T ss_dssp CCEEEEEECCSSSH---HHHHHHHHHHHHHHTTCEE
T ss_pred cceEEEEEeCCCCh---HHHHHHHHHHHHhhCCCEE
Confidence 34677766776542 2357788888888777654
No 167
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=31.96 E-value=82 Score=25.92 Aligned_cols=42 Identities=12% Similarity=0.225 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 40 AIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.+.+++.|+++|+.|+.-+-...--+.+.+...+.|+.+..+
T Consensus 46 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 87 (275)
T 4imr_A 46 GAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQEL 87 (275)
T ss_dssp HHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEE
Confidence 456777777788877654443333444444444455555544
No 168
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=31.86 E-value=84 Score=25.99 Aligned_cols=36 Identities=14% Similarity=0.076 Sum_probs=28.4
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCC
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARN 51 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G 51 (225)
..+.++++|||||=++..--+...+++..+.+...+
T Consensus 2 ~~~~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~ 37 (252)
T 1nup_A 2 KSRIPVVLLACGSFNPITNMHLRMFEVARDHLHQTG 37 (252)
T ss_dssp -CCEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCceEEEEEecCcHhhHHHHHHHHHHHHHhcccC
Confidence 355678999999999888888888887777776665
No 169
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=31.74 E-value=49 Score=28.96 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=28.5
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
..|+|||..| .-||+|-..++.+. +. .+|||||-+.
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~-l~-~~kPVVlTGA 120 (332)
T 2wlt_A 85 RIQGVVITHG-TDTLEESAYFLNLV-LH-STKPVVLVGA 120 (332)
T ss_dssp TCCEEEEECC-SSSHHHHHHHHHHH-CC-CSSCEEEECC
T ss_pred CCCEEEEecC-chhHHHHHHHHHHH-hC-CCCCEEEECC
Confidence 4689999975 79999999888754 23 6899999754
No 170
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=31.64 E-value=39 Score=27.09 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=22.6
Q ss_pred EEEEeCCCCCC-ChHHHHHHHHHHHHHHhCCCeEEEcCCC
Q 027287 22 ICVFCGSSAGK-KSTYKDAAIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 22 V~Vfggs~~~~-~~~~~~~A~~lG~~LA~~G~~lv~GGg~ 60 (225)
|-=||||.... .+...+.++++.++.......||.|||+
T Consensus 4 ViK~GGs~l~~~~~~~~~~~~~i~~l~~g~~vvlV~ggG~ 43 (219)
T 2ij9_A 4 VLSLGGSVLSNESEKIREFAKTIESVAQQNQVFVVVGGGK 43 (219)
T ss_dssp EEEECSSTTTTCHHHHHHHHHHHHHHHHHSEEEEEECCHH
T ss_pred EEEeChhhhCChHHHHHHHHHHHHHHcCCCEEEEEECcch
Confidence 44488877653 2455556666655433223468899865
No 171
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=31.62 E-value=28 Score=25.61 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=20.3
Q ss_pred eEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE
Q 027287 21 RICVFCGSSAGKKSTYKDAAIELGKELVARNIDL 54 (225)
Q Consensus 21 ~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 54 (225)
+|.|+.+|..++. .+.|+++++.|.+.|+.+
T Consensus 2 ki~iiy~S~~Gnt---~~~a~~i~~~l~~~g~~v 32 (147)
T 1f4p_A 2 KALIVYGSTTGNT---EYTAETIARELADAGYEV 32 (147)
T ss_dssp EEEEEEECSSSHH---HHHHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCcCHH---HHHHHHHHHHHHhcCCee
Confidence 4555556776642 356788888887777765
No 172
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=31.49 E-value=35 Score=28.65 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=22.1
Q ss_pred eEEE-EeCCCCCCC--hHHHHHHHHHHHHHHhCCCeEEEcCCC
Q 027287 21 RICV-FCGSSAGKK--STYKDAAIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 21 ~V~V-fggs~~~~~--~~~~~~A~~lG~~LA~~G~~lv~GGg~ 60 (225)
.|.| +|||....+ +...+.|+++..+.......||.|||+
T Consensus 38 ~iVIKlGGs~l~~~~~~~~~~la~~I~~l~~~~~vVlVhGGg~ 80 (270)
T 2ogx_B 38 ATVIKIGGQSVIDRGRAAVYPLVDEIVAARKNHKLLIGTGAGT 80 (270)
T ss_dssp EEEEEECTTTTGGGCHHHHHHHHHHHHHHTTTCEEEEEECCCH
T ss_pred eEEEEechHHhCCCCHHHHHHHHHHHHHHhcCCcEEEEECChH
Confidence 4445 777765421 234444555554332223578899997
No 173
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=31.39 E-value=82 Score=27.26 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=21.1
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPK 84 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~ 84 (225)
...+|+|+|+.|++ +..-|+..|.+|+++..+
T Consensus 196 ~~VlV~GaG~vG~~--aiqlak~~Ga~Vi~~~~~ 227 (369)
T 1uuf_A 196 KKVGVVGIGGLGHM--GIKLAHAMGAHVVAFTTS 227 (369)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCEEEEEeCC
Confidence 45677887654544 445566778888888543
No 174
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=31.38 E-value=52 Score=27.60 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=24.1
Q ss_pred HHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEe
Q 027287 112 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 152 (225)
Q Consensus 112 mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~ 152 (225)
..+.+|.+|+ -||=||+.|+...+. ..++|++-+|
T Consensus 60 ~~~~~D~vi~-~GGDGT~l~a~~~~~-----~~~~P~lGI~ 94 (292)
T 2an1_A 60 IGQQADLAVV-VGGDGNMLGAARTLA-----RYDINVIGIN 94 (292)
T ss_dssp HHHHCSEEEE-CSCHHHHHHHHHHHT-----TSSCEEEEBC
T ss_pred cccCCCEEEE-EcCcHHHHHHHHHhh-----cCCCCEEEEE
Confidence 4456787666 578999999986662 2357866555
No 175
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=31.38 E-value=14 Score=31.43 Aligned_cols=31 Identities=19% Similarity=0.180 Sum_probs=18.5
Q ss_pred cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCch
Q 027287 126 YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 126 ~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~ 158 (225)
.++-|.++..++ ..++ ..+=+++-+.+|.|+
T Consensus 167 ~~~~D~~Aa~lA-~~l~-Ad~LiilTDVdGvy~ 197 (276)
T 2ogx_A 167 PHRADTGAFLLA-DAFG-AAGLTIVENVDGIYT 197 (276)
T ss_dssp SSCHHHHHHHHH-HHHT-CSEEEEEESSSSEES
T ss_pred CCChHHHHHHHH-HHcC-CCEEEEEeCCCccCC
Confidence 567777776654 2333 345555557788774
No 176
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=31.29 E-value=2e+02 Score=22.87 Aligned_cols=39 Identities=13% Similarity=0.004 Sum_probs=24.4
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
.++.++|+|+..+. .++-+.+....+-+.+.+.|+.++.
T Consensus 5 ~~~~~~Ig~i~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~ 43 (293)
T 3l6u_A 5 SPKRNIVGFTIVND--KHEFAQRLINAFKAEAKANKYEALV 43 (293)
T ss_dssp ----CEEEEEESCS--CSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcEEEEEEecC--CcHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45667899987543 3566666666677777777877664
No 177
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=31.28 E-value=1.3e+02 Score=24.92 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=40.2
Q ss_pred ccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeC
Q 027287 15 NQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIP 83 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP 83 (225)
+.+-.-+++++-|++.+ .-+.+++.||++|..|+.-+-. .. +.+.+...+.|+.+..+.-
T Consensus 4 ~f~L~GKvalVTGas~G-------IG~aiA~~la~~Ga~Vvi~~r~-~~-~~~~~~~~~~g~~~~~~~~ 63 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTG-------LGQAIAVGLAAAGAEVVCAARR-AP-DETLDIIAKDGGNASALLI 63 (247)
T ss_dssp TTCCTTCEEEETTTTSH-------HHHHHHHHHHHTTCEEEEEESS-CC-HHHHHHHHHTTCCEEEEEC
T ss_pred CcCCCCCEEEEeCcCCH-------HHHHHHHHHHHcCCEEEEEeCC-cH-HHHHHHHHHhCCcEEEEEc
Confidence 34444466776666654 2356888999999999876543 33 5566667778898888743
No 178
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=31.20 E-value=49 Score=25.47 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=23.8
Q ss_pred CcceEEEEeCCCCC-CChHHHHHHHHHHHHHHhCCCeEE
Q 027287 18 KFNRICVFCGSSAG-KKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 18 ~~~~V~Vfggs~~~-~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
+-++++|||..... ....|...++++-+.|.+.|..++
T Consensus 88 ~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v 126 (182)
T 2wc1_A 88 SGKTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGANVV 126 (182)
T ss_dssp TTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTCEEE
T ss_pred CCCEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCCEEE
Confidence 34678888654321 112345667778888888888776
No 179
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=31.17 E-value=1.3e+02 Score=25.03 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=34.8
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
-+++++-|++.+ .-+.+++.||++|+.|+.-+-..---+.+++...+.|+.++.+
T Consensus 9 gKvalVTGas~G-------IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~ 63 (255)
T 4g81_D 9 GKTALVTGSARG-------LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGV 63 (255)
T ss_dssp TCEEEETTCSSH-------HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCEEEEeCCCcH-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 345555555543 2456888899999999877654333334444455667777776
No 180
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=31.08 E-value=1.5e+02 Score=24.45 Aligned_cols=44 Identities=25% Similarity=0.152 Sum_probs=27.5
Q ss_pred HhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCc
Q 027287 113 AKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 157 (225)
Q Consensus 113 v~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w 157 (225)
.+...+.|+|+||. |...+++.+.-..-++.=..|.+++.+.||
T Consensus 36 ~~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (248)
T 3oc6_A 36 GERGQATIVLTGGG-TGIGLLKRVRERSGEIDWSKVHIYWGDERF 79 (248)
T ss_dssp HHHSCEEEEECCSH-HHHHHHHHHHHTGGGSCGGGEEEEESEEEC
T ss_pred HhCCCEEEEECCCc-cHHHHHHHHHhhccCCCcceEEEEEeeecc
Confidence 34678999999995 777777766531111211456667666666
No 181
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=31.05 E-value=1.7e+02 Score=23.66 Aligned_cols=33 Identities=15% Similarity=0.029 Sum_probs=22.0
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.++|-|.|+++. ..+.+++.|+++|+.|+.-+.
T Consensus 21 ~k~vlVTGas~g--------IG~aia~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 21 GTTALVTGGSKG--------IGYAIVEELAGLGARVYTCSR 53 (273)
T ss_dssp TCEEEEESCSSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCcch--------HHHHHHHHHHHCCCEEEEEeC
Confidence 356777765442 245678888889999875543
No 182
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=31.03 E-value=58 Score=24.81 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=19.8
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
++|.|+.+|..++.. +.|+.+++.|.+.|+.
T Consensus 5 ~kv~IvY~S~~GnT~---~iA~~ia~~l~~~g~~ 35 (159)
T 3fni_A 5 TSIGVFYVSEYGYSD---RLAQAIINGITKTGVG 35 (159)
T ss_dssp CEEEEEECTTSTTHH---HHHHHHHHHHHHTTCE
T ss_pred CEEEEEEECCChHHH---HHHHHHHHHHHHCCCe
Confidence 356666677776533 4567777777776654
No 183
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=30.87 E-value=1.6e+02 Score=24.61 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhh
Q 027287 158 NSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEY 197 (225)
Q Consensus 158 ~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~ 197 (225)
.++.+.+ +++++|-+++-. ..+-.++..++++.+++-
T Consensus 292 ~~~~~~~-~l~~~g~i~p~~--~~~~l~~~~~A~~~l~~g 328 (348)
T 4eez_A 292 LDLAEAF-QFGAEGKVKPIV--ATRKLEEINDIIDEMKAG 328 (348)
T ss_dssp HHHHHHH-HHHHTTSCCCCE--EEECGGGHHHHHHHHHTT
T ss_pred HHHHHHH-HHHHcCCCEEEE--EEEeHHHHHHHHHHHHCC
Confidence 3444433 366778776432 244567788888877663
No 184
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.85 E-value=92 Score=25.55 Aligned_cols=54 Identities=17% Similarity=0.265 Sum_probs=31.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+..+-..---+.+.+...+.|+.+..+
T Consensus 5 k~~lVTGas~-G-------IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 58 (264)
T 3tfo_A 5 KVILITGASG-G-------IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQ 58 (264)
T ss_dssp CEEEESSTTS-H-------HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCcc-H-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 3555555443 2 2456788888999998866544222333444444456666655
No 185
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=30.74 E-value=89 Score=25.97 Aligned_cols=15 Identities=7% Similarity=0.167 Sum_probs=6.8
Q ss_pred HHHHHHHHhCCCeEE
Q 027287 41 IELGKELVARNIDLV 55 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv 55 (225)
+.+.+.+.+++..|+
T Consensus 16 ~~i~~~l~~~~~eLv 30 (243)
T 3qy9_A 16 QRVARLAEEKGHEIV 30 (243)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhCCCEEE
Confidence 344444444444443
No 186
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=30.66 E-value=2e+02 Score=24.22 Aligned_cols=87 Identities=16% Similarity=0.035 Sum_probs=44.3
Q ss_pred CHHHHHHHHHh--hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCC------c
Q 027287 104 DMHQRKAEMAK--HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFIS------P 175 (225)
Q Consensus 104 ~m~~Rk~~mv~--~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~------~ 175 (225)
++.+=-+.+.+ ..++++...=+.|+.+|....+.-. ..+|||+++... -..+--.. +-..|-+- .
T Consensus 186 ~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~G-~~~~~~~~---~~Htgal~~~~~g~~ 258 (288)
T 1oi7_A 186 TFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD---HMKKPVVGFIGG-RSAPKGKR---MGHAGAIIMGNVGTP 258 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH---HCCSCEEEEESC-C---------------------CCSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEec-CCCCcccc---CcchhhcccCCCCCH
Confidence 45444455544 3457777777788887766544222 247999998653 22210000 11111110 0
Q ss_pred c------ccCcEEEcCCHHHHHHHHHhh
Q 027287 176 N------ARHIIVSAPNAKELMNKMEEY 197 (225)
Q Consensus 176 ~------~~~~i~~~~d~ee~~~~l~~~ 197 (225)
. ...=++.++|++|+.+.+++.
T Consensus 259 ~~~~aa~~~aGv~~~~~~~el~~~~~~~ 286 (288)
T 1oi7_A 259 ESKLRAFAEAGIPVADTIDEIVELVKKA 286 (288)
T ss_dssp HHHHHHHHHHTCCBCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHHH
Confidence 0 001146799999999988764
No 187
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=30.64 E-value=33 Score=30.30 Aligned_cols=38 Identities=13% Similarity=0.162 Sum_probs=27.2
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
+++|+|++|......+.=...|+.+.+.|-+.||.++.
T Consensus 22 ~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~ 59 (386)
T 3e5n_A 22 KIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVL 59 (386)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEE
Confidence 45677755555444555567889999999889998873
No 188
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=30.59 E-value=58 Score=27.90 Aligned_cols=52 Identities=17% Similarity=0.233 Sum_probs=33.7
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE-----------------EEcCCCccHHHHHHHHHHhcCCeEEEEe
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDL-----------------VYGGGSVGLMGLISQAVYDGGRHVIGVI 82 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l-----------------v~GGg~~GlM~a~a~gA~~aGG~viGIi 82 (225)
++|+|+.-... + ++++.++|.++|+.+ +-| | .|.|-.+++..... -.++||-
T Consensus 30 mki~iv~~~~~---~-----~~~l~~~L~~~g~~v~~~~~~~~~~~~~DlvIvlG-G-DGT~L~aa~~~~~~-~PilGIN 98 (278)
T 1z0s_A 30 MRAAVVYKTDG---H-----VKRIEEALKRLEVEVELFNQPSEELENFDFIVSVG-G-DGTILRILQKLKRC-PPIFGIN 98 (278)
T ss_dssp CEEEEEESSST---T-----HHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEE-C-HHHHHHHHTTCSSC-CCEEEEE
T ss_pred eEEEEEeCCcH---H-----HHHHHHHHHHCCCEEEEccccccccCCCCEEEEEC-C-CHHHHHHHHHhCCC-CcEEEEC
Confidence 45999953222 2 677888888876654 445 4 48886666554444 6889984
No 189
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=30.53 E-value=34 Score=29.77 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=26.8
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
++|+|++|......+.=...|+.+.+.|-+.||.++.
T Consensus 4 ~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~ 40 (364)
T 3i12_A 4 LRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVL 40 (364)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred cEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEE
Confidence 4677755545444555567889999999889998873
No 190
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=30.51 E-value=1.1e+02 Score=27.22 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=41.6
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe------------------------------------------EE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID------------------------------------------LV 55 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~------------------------------------------lv 55 (225)
..++|+|++=. .++...+.+++|.++|.++|+. +|
T Consensus 37 ~~k~I~iv~K~---~~~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI 113 (365)
T 3pfn_A 37 SPKSVLVIKKM---RDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFII 113 (365)
T ss_dssp CCCEEEEEECT---TCGGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEE
T ss_pred CCCEEEEEecC---CCHHHHHHHHHHHHHHHHCCCEEEEehHHhhhhccccccccccccccccccccChhhcccCCCEEE
Confidence 46789999632 3566677888898888876653 23
Q ss_pred EcCCCccHHHHHHHHHHhcCCeEEEEe
Q 027287 56 YGGGSVGLMGLISQAVYDGGRHVIGVI 82 (225)
Q Consensus 56 ~GGg~~GlM~a~a~gA~~aGG~viGIi 82 (225)
+=|| .|.|--+++-....+-.++||-
T Consensus 114 ~lGG-DGT~L~aa~~~~~~~~PvlGiN 139 (365)
T 3pfn_A 114 CLGG-DGTLLYASSLFQGSVPPVMAFH 139 (365)
T ss_dssp EESS-TTHHHHHHHHCSSSCCCEEEEE
T ss_pred EEcC-hHHHHHHHHHhccCCCCEEEEc
Confidence 4455 4888777776555566889983
No 191
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=30.51 E-value=21 Score=29.70 Aligned_cols=39 Identities=21% Similarity=0.121 Sum_probs=26.1
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG 57 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G 57 (225)
.++|+|.+|......+.-...++.+.+.|.+.||.++.=
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i 41 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPI 41 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEE
Confidence 356777765443323333456888999998999998753
No 192
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=30.46 E-value=84 Score=26.36 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=45.3
Q ss_pred HHHhhCCEEEEecCC--cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcE--EEcCC
Q 027287 111 EMAKHSDAFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHII--VSAPN 186 (225)
Q Consensus 111 ~mv~~sDa~IvlpGG--~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i--~~~~d 186 (225)
.++..||++++-+-- -||++++.+.. ...+++++++++.-+-+-. +.+.|+ +.+ ..+.|
T Consensus 160 ~~l~~~D~v~iTGsTlvN~Ti~~lL~~~------~~~~~vvl~GPS~~~~P~~-----~~~~Gv------~~l~g~~v~d 222 (249)
T 3npg_A 160 HILPEVDGIIASASCIVNGTLDMILDRA------KKAKLIVITGPTGQLLPEF-----LKGTKV------THLASMKVTN 222 (249)
T ss_dssp HHGGGCSEEEEETTHHHHTCHHHHHHHC------SSCSEEEEESGGGCSCGGG-----GTTSSC------CEEEEEEESC
T ss_pred hhhccCCEEEEEeeeeccCCHHHHHHhC------cccCeEEEEecCchhhHHH-----HhhCCc------cEEEEEEecC
Confidence 577899998877654 49999987554 3567889998764333211 112221 222 45678
Q ss_pred HHHHHHHHHh
Q 027287 187 AKELMNKMEE 196 (225)
Q Consensus 187 ~ee~~~~l~~ 196 (225)
++.+++.|+.
T Consensus 223 ~~~~l~~i~~ 232 (249)
T 3npg_A 223 IEKALVKLKL 232 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999999976
No 193
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=30.31 E-value=64 Score=27.31 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=24.7
Q ss_pred CcceEEEEeCCCCC-CChHHHHHHHHHHHHHHhCCCeEE
Q 027287 18 KFNRICVFCGSSAG-KKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 18 ~~~~V~Vfggs~~~-~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
|.++|++++.+-.+ ..--....+.+|++.|+++||.|.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~ 39 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVL 39 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEE
Confidence 45678888654322 111123457899999999988765
No 194
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=30.29 E-value=21 Score=29.39 Aligned_cols=78 Identities=17% Similarity=0.159 Sum_probs=49.0
Q ss_pred CCEEEEecCCcccHHHHHHHH-----HH---HHhCCCCCcEEEEeCCCCchHHH--HHHHHHHHcCC--CCccccCcEEE
Q 027287 116 SDAFIALPGGYGTLEELLEVI-----TW---AQLGIHDKPVGLLNVDGYYNSLL--TFIDKAVEEGF--ISPNARHIIVS 183 (225)
Q Consensus 116 sDa~IvlpGG~GTL~Ei~~a~-----~~---~qlg~~~kPiill~~~g~w~~l~--~~l~~~~~~gf--i~~~~~~~i~~ 183 (225)
+|++||.|-..+||.-+..=+ +. ..+ ..++|+++.-. ..|..-. +.+.++.+.|. +++ ....+.-
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~L-k~~~plvl~Pa-em~~~~~~~~Nm~~L~~~G~~iipp-~~g~ya~ 171 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVAL-KERRPLVLVPR-EAPFSSIHLENMLKLSNLGAVILPA-APGFYHQ 171 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHH-HHTCCEEEEEC-CSSCCHHHHHHHHHHHHHTCEECCS-CCCCTTC
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHH-hcCCcEEEEEc-ccccCHHHHHHHHHHHHCCCEEeCC-CcccccC
Confidence 899999999999998875311 10 111 14699998855 5665443 33445556563 333 3344555
Q ss_pred cCCHHHHHHHHHh
Q 027287 184 APNAKELMNKMEE 196 (225)
Q Consensus 184 ~~d~ee~~~~l~~ 196 (225)
-.++||+++++-.
T Consensus 172 p~~iediv~~vv~ 184 (209)
T 3zqu_A 172 PQSVEDLVDFVVA 184 (209)
T ss_dssp CCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 6789998887654
No 195
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=30.26 E-value=2.3e+02 Score=23.23 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCc
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVG 97 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~ 97 (225)
+.++|-|.|+++ -..+.+++.|+++|+.|+.-+-...--+.+.+...+.++.+..+ .-.++
T Consensus 7 ~gk~vlVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----------~~Dv~ 67 (280)
T 3tox_A 7 EGKIAIVTGASS--------GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAAL-----------AGDVG 67 (280)
T ss_dssp TTCEEEESSTTS--------HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEEC-----------CCCTT
T ss_pred CCCEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-----------ECCCC
Q ss_pred eEeecCCHHHHHHHHHhhCCEEEEecCCcc--------cHHHHHHHHHHH
Q 027287 98 EVKPVADMHQRKAEMAKHSDAFIALPGGYG--------TLEELLEVITWA 139 (225)
Q Consensus 98 ~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~G--------TL~Ei~~a~~~~ 139 (225)
+.-....+.+.-.--...-|++|-..|..+ |.+++-..+..+
T Consensus 68 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN 117 (280)
T 3tox_A 68 DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTN 117 (280)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
No 196
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=30.21 E-value=2.1e+02 Score=25.19 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=14.5
Q ss_pred cccHHHHHHHHHHHHhCCCCCcEEEEeCCCCch
Q 027287 126 YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 158 (225)
Q Consensus 126 ~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~ 158 (225)
.|+=|.++..++ ..++ ..+=+++-+.+|.|+
T Consensus 146 ~gd~D~lAa~vA-~~l~-Ad~LiilTDVdGvy~ 176 (367)
T 2j5v_A 146 VGDNDNLSALAA-ILAG-ADKLLLLTDQKGLYT 176 (367)
T ss_dssp CCSHHHHHHHHH-HHHT-CSEEEEEECC-----
T ss_pred CCCHHHHHHHHH-HhcC-CCEEEEeecCCceEC
Confidence 566677776554 2233 345555667888886
No 197
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=29.97 E-value=96 Score=27.06 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=34.2
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLTFIDK 166 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~-----g~w~~l~~~l~~ 166 (225)
..|+|||..| .-||+|-..++.+. +. .+|||||-+.- --.|...+++..
T Consensus 82 ~~dG~VItHG-TDTmeeTA~~Ls~~-l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 135 (331)
T 1agx_A 82 SVNGVVITHG-TDTMEETAFFLNLV-VH-TDKPIVLVGSMRPSTALSADGPLNLYSA 135 (331)
T ss_dssp TCCEEEEECC-GGGHHHHHHHHHHH-CC-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEecC-cchHHHHHHHHHHH-cC-CCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 4689999875 79999999888754 23 68999997542 134455555543
No 198
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=29.96 E-value=53 Score=27.44 Aligned_cols=30 Identities=27% Similarity=0.374 Sum_probs=25.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
-..|||||+. |+=.+.++...+.|..|+.+
T Consensus 8 KvalVTGas~-GIG~aiA~~la~~Ga~Vv~~ 37 (254)
T 4fn4_A 8 KVVIVTGAGS-GIGRAIAKKFALNDSIVVAV 37 (254)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHcCCEEEEE
Confidence 4678999986 99999999988999988765
No 199
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=29.94 E-value=3.2e+02 Score=24.83 Aligned_cols=99 Identities=8% Similarity=-0.029 Sum_probs=52.3
Q ss_pred HHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecC--CHHHHHHHHHhhCCEE
Q 027287 42 ELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVA--DMHQRKAEMAKHSDAF 119 (225)
Q Consensus 42 ~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~--~m~~Rk~~mv~~sDa~ 119 (225)
.++..... ++.+|.|+|+.| ..+++.-.+.|-.++.|-.+...-+ .....+..+ +...=+..=++.+|++
T Consensus 341 ~~~~~~~~-~~viIiG~G~~G--~~la~~L~~~g~~v~vid~d~~~~~-----~~~~~i~gD~t~~~~L~~agi~~ad~v 412 (565)
T 4gx0_A 341 LIGEAPED-ELIFIIGHGRIG--CAAAAFLDRKPVPFILIDRQESPVC-----NDHVVVYGDATVGQTLRQAGIDRASGI 412 (565)
T ss_dssp ------CC-CCEEEECCSHHH--HHHHHHHHHTTCCEEEEESSCCSSC-----CSSCEEESCSSSSTHHHHHTTTSCSEE
T ss_pred HhcCCCCC-CCEEEECCCHHH--HHHHHHHHHCCCCEEEEECChHHHh-----hcCCEEEeCCCCHHHHHhcCccccCEE
Confidence 34443333 899999998755 5677777778888888844332111 112333322 2222233446789999
Q ss_pred EEecCCcccHHHHHHHHHHHHhCCCCCcEEEE
Q 027287 120 IALPGGYGTLEELLEVITWAQLGIHDKPVGLL 151 (225)
Q Consensus 120 IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill 151 (225)
|+..+-- -.-+..++..++++. +.+++..
T Consensus 413 i~~~~~d--~~ni~~~~~ak~l~~-~~~iiar 441 (565)
T 4gx0_A 413 IVTTNDD--STNIFLTLACRHLHS-HIRIVAR 441 (565)
T ss_dssp EECCSCH--HHHHHHHHHHHHHCS-SSEEEEE
T ss_pred EEECCCc--hHHHHHHHHHHHHCC-CCEEEEE
Confidence 9998863 222333444445542 2355543
No 200
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=29.79 E-value=1.4e+02 Score=24.64 Aligned_cols=17 Identities=12% Similarity=-0.070 Sum_probs=9.0
Q ss_pred HHHHHHHHhCCCeEEEc
Q 027287 41 IELGKELVARNIDLVYG 57 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~G 57 (225)
+.+++.|+++|+.|+.-
T Consensus 42 ~aia~~la~~G~~V~~~ 58 (283)
T 3v8b_A 42 RATALALAADGVTVGAL 58 (283)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 34555555556655543
No 201
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=29.77 E-value=49 Score=28.93 Aligned_cols=49 Identities=20% Similarity=0.252 Sum_probs=34.2
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLTFIDK 166 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~-----g~w~~l~~~l~~ 166 (225)
..|+|||..| .-||+|-..++.+. +. .+|||||-+.- --.|...+++..
T Consensus 83 ~~dG~VItHG-TDTmeeTA~~Ls~~-l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 136 (330)
T 1wsa_A 83 ETEAVIITHG-TDTMEETAFFLNLT-VK-SQKPVVLVGAMRPGSSMSADGPMNLYNA 136 (330)
T ss_dssp TCCCEEEECC-SSSHHHHHHHHHHH-CC-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEEcC-cchHHHHHHHHHHH-cC-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 4789999975 79999999888754 23 68999997542 134455555543
No 202
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=29.56 E-value=44 Score=28.53 Aligned_cols=32 Identities=34% Similarity=0.388 Sum_probs=22.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhc-CCeEEEEeC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDG-GRHVIGVIP 83 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~a-GG~viGIiP 83 (225)
...+|+|+|. |+=.+++.-|... |.+|+++-.
T Consensus 172 ~~vlV~Gagg-~iG~~~~~~a~~~~Ga~Vi~~~~ 204 (347)
T 1jvb_A 172 KTLLVVGAGG-GLGTMAVQIAKAVSGATIIGVDV 204 (347)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHHTCCEEEEEES
T ss_pred CEEEEECCCc-cHHHHHHHHHHHcCCCeEEEEcC
Confidence 4578899872 5555566777777 888888743
No 203
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=29.52 E-value=1.6e+02 Score=21.22 Aligned_cols=70 Identities=17% Similarity=0.158 Sum_probs=41.7
Q ss_pred HHHHHHhhCCEEEEec--CCcccHHHHHHHHHHHHhCCCCC-cEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc
Q 027287 108 RKAEMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDK-PVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA 184 (225)
Q Consensus 108 Rk~~mv~~sDa~Ivlp--GG~GTL~Ei~~a~~~~qlg~~~k-Piill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~ 184 (225)
....+...||++|.-. -|+|. =+.|++. .++ ||+..+..+....+. .+ ...++..
T Consensus 67 ~~~~~~~~adv~v~ps~~e~~~~--~~~Eama------~G~vPvi~~~~~~~~~~~~------------~~--~~~~~~~ 124 (166)
T 3qhp_A 67 ELLEILKTCTLYVHAANVESEAI--ACLEAIS------VGIVPVIANSPLSATRQFA------------LD--ERSLFEP 124 (166)
T ss_dssp HHHHHHTTCSEEEECCCSCCCCH--HHHHHHH------TTCCEEEECCTTCGGGGGC------------SS--GGGEECT
T ss_pred HHHHHHHhCCEEEECCcccCccH--HHHHHHh------cCCCcEEeeCCCCchhhhc------------cC--CceEEcC
Confidence 3445678899887643 24443 3455553 677 998843333332221 11 1236777
Q ss_pred CCHHHHHHHHHhhcC
Q 027287 185 PNAKELMNKMEEYFP 199 (225)
Q Consensus 185 ~d~ee~~~~l~~~~~ 199 (225)
+|++++.+.|.+...
T Consensus 125 ~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 125 NNAKDLSAKIDWWLE 139 (166)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999988887653
No 204
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=29.36 E-value=55 Score=27.70 Aligned_cols=38 Identities=18% Similarity=0.360 Sum_probs=20.8
Q ss_pred HHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 41 IELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.+++.||++|+.|+.-+-. -+.+.+.+.+.|+.++.+
T Consensus 43 ~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~g~~~~~~ 80 (273)
T 4fgs_A 43 LAAAKRFVAEGARVFITGRR---KDVLDAAIAEIGGGAVGI 80 (273)
T ss_dssp HHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCCeEEE
Confidence 45666777777776654432 133333344556666555
No 205
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=29.33 E-value=1e+02 Score=28.21 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=35.0
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLTFIDK 166 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~-----g~w~~l~~~l~~ 166 (225)
..|+|||..| .-||+|-+.++.+. +...+|||||-+.- --.|...+++..
T Consensus 168 ~~DG~VItHG-TDTMeeTA~~Lsl~-l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 222 (438)
T 1zq1_A 168 GDYGVVVAHG-TDTMGYTAAALSFM-LRNLGKPVVLVGAQRSSDRPSSDAAMNLICS 222 (438)
T ss_dssp TCSEEEEECC-SSSHHHHHHHHHHH-EESCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEecC-chhHHHHHHHHHHH-HhCCCCCEEEeCCCCCCCCCCcchHHHHHHH
Confidence 5799999975 79999999888653 32358999997642 134455565543
No 206
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=29.32 E-value=68 Score=25.04 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=24.1
Q ss_pred HHHHHHHHHHh-----CCCeEE-EcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 39 AAIELGKELVA-----RNIDLV-YGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 39 ~A~~lG~~LA~-----~G~~lv-~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.|++|-+.+.+ .|-.|+ .|+|++++-..+++ .+++|+||
T Consensus 9 a~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~----~~~~V~gv 53 (191)
T 3dou_A 9 AAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNS----LARKIISI 53 (191)
T ss_dssp HHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTT----TCSEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHH----cCCcEEEE
Confidence 44555555543 466666 88887444443333 28999999
No 207
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=29.32 E-value=1.3e+02 Score=20.27 Aligned_cols=34 Identities=12% Similarity=-0.086 Sum_probs=17.9
Q ss_pred HhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEe
Q 027287 113 AKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 152 (225)
Q Consensus 113 v~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~ 152 (225)
+..+|++|...|.. ....+..+. .+ .+++.+.+.
T Consensus 67 ~~~~d~vi~~~~~~-~~~~~~~~~--~~---~g~~~~~~~ 100 (118)
T 3ic5_A 67 LGGFDAVISAAPFF-LTPIIAKAA--KA---AGAHYFDLT 100 (118)
T ss_dssp TTTCSEEEECSCGG-GHHHHHHHH--HH---TTCEEECCC
T ss_pred HcCCCEEEECCCch-hhHHHHHHH--HH---hCCCEEEec
Confidence 45789888887533 334444333 12 345555443
No 208
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=29.31 E-value=55 Score=27.27 Aligned_cols=41 Identities=10% Similarity=-0.097 Sum_probs=26.0
Q ss_pred HHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEe
Q 027287 41 IELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVI 82 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIi 82 (225)
+.+++.||++|..++.-+-. .--.+..+...+.|++++.+-
T Consensus 21 ~aia~~la~~Ga~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~ 61 (258)
T 4gkb_A 21 GAISMRLAEERAIPVVFARH-APDGAFLDALAQRQPRATYLP 61 (258)
T ss_dssp HHHHHHHHHTTCEEEEEESS-CCCHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHcCCEEEEEECC-cccHHHHHHHHhcCCCEEEEE
Confidence 46778888899987765543 222344455556677777763
No 209
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=29.23 E-value=1.5e+02 Score=22.63 Aligned_cols=80 Identities=13% Similarity=0.104 Sum_probs=43.4
Q ss_pred HhhCCE-EEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCc--hHHHHHHHHHHHcCCCCccccCcEEEc-CCHH
Q 027287 113 AKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY--NSLLTFIDKAVEEGFISPNARHIIVSA-PNAK 188 (225)
Q Consensus 113 v~~sDa-~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w--~~l~~~l~~~~~~gfi~~~~~~~i~~~-~d~e 188 (225)
+...|. ++..|=-.|++......+ +.++...+|+++++.+.|.+ ..-...++++....-+ .+-+.+- .+.+
T Consensus 85 l~~yD~iilg~Pvy~g~~~~~~~~f-l~~~~l~gk~v~~f~t~g~~~~g~a~~~l~~~l~~~~~----~~g~~~~~~~~~ 159 (171)
T 4ici_A 85 IGTYDVVFIGYPIWWDLAPRIINTF-IEGHSLKGKTVVPFATSGGSSIGNSATVLKKTYPDLNW----KEGRLLNRTDEK 159 (171)
T ss_dssp GGGCSEEEEEEECBTTBCCHHHHHH-HHHSCCTTSEEEEEEECSSCCSHHHHHHHHHHSTTSEE----CCCEECSSCCHH
T ss_pred HhHCCEEEEecccccCCchHHHHHH-HHHcCCCcCEEEEEEecCCCCcchHHHHHHHHcCCCee----ccCeEecCCCHH
Confidence 356785 444565456655544333 23455678999998775533 4555666665542211 1222222 3566
Q ss_pred HHHHHHHhh
Q 027287 189 ELMNKMEEY 197 (225)
Q Consensus 189 e~~~~l~~~ 197 (225)
++-++|++.
T Consensus 160 ~i~~Wl~~~ 168 (171)
T 4ici_A 160 AIRAWLDVI 168 (171)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777777663
No 210
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=29.19 E-value=1.1e+02 Score=24.77 Aligned_cols=56 Identities=14% Similarity=0.033 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc-CCCccHHHHHHHHHHhcCCeEEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG-GGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G-Gg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.++|-|.|+++. ..+.+++.|+++|+.++.. +....--+.+.+...+.|+.+..+
T Consensus 3 ~~k~vlVTGas~g--------IG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (258)
T 3oid_A 3 QNKCALVTGSSRG--------VGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59 (258)
T ss_dssp CCCEEEESSCSSH--------HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEecCCch--------HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
No 211
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=28.92 E-value=66 Score=28.04 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=47.8
Q ss_pred HHHHHHHhhCCEEEEe--cCCcc-cHHHHH-HHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcE-
Q 027287 107 QRKAEMAKHSDAFIAL--PGGYG-TLEELL-EVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHII- 181 (225)
Q Consensus 107 ~Rk~~mv~~sDa~Ivl--pGG~G-TL~Ei~-~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i- 181 (225)
+...-+...||++|.- ..|+| ++-|.. -.+.... .++|||.-+. +.......+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla---~G~PVIas~~-------------------v~~~~~G~l~ 333 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDF---FGLPAVCPNA-------------------VVGPYKSRFG 333 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHH---HTCCEEEEGG-------------------GTCSCSSEEE
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhh---CCCcEEEehh-------------------cccCcceEEE
Confidence 4455677899988753 23444 444532 1111111 4799998653 122233455
Q ss_pred EEcCCHHHHHHHHHhhcCCc-ccccccccccc
Q 027287 182 VSAPNAKELMNKMEEYFPQH-ERVASKLSWEN 212 (225)
Q Consensus 182 ~~~~d~ee~~~~l~~~~~~~-~~~~~~~~w~~ 212 (225)
+-.+|++++.+.|.+....+ .....+++|..
T Consensus 334 v~~~d~~~la~ai~~ll~~~~~~~~~~~sw~~ 365 (406)
T 2hy7_A 334 YTPGNADSVIAAITQALEAPRVRYRQCLNWSD 365 (406)
T ss_dssp ECTTCHHHHHHHHHHHHHCCCCCCSCCCBHHH
T ss_pred eCCCCHHHHHHHHHHHHhCcchhhhhcCCHHH
Confidence 66789999988887765322 13445678874
No 212
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=28.90 E-value=86 Score=26.35 Aligned_cols=33 Identities=6% Similarity=0.002 Sum_probs=23.1
Q ss_pred HHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhh
Q 027287 164 IDKAVEEGFISPNARHIIVSAPNAKELMNKMEEY 197 (225)
Q Consensus 164 l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~ 197 (225)
+-+++++|-++.. ....+-.++..++++.+.+-
T Consensus 283 ~~~l~~~g~l~~~-i~~~~~l~~~~~A~~~~~~~ 315 (325)
T 3jyn_A 283 LFDMLASGKLKVD-GIEQYALKDAAKAQIELSAR 315 (325)
T ss_dssp HHHHHHTTSSCCC-CCEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHCCCeeCc-cccEEcHHHHHHHHHHHHcC
Confidence 3356777877765 45567778888888888763
No 213
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=28.71 E-value=38 Score=28.90 Aligned_cols=37 Identities=14% Similarity=0.362 Sum_probs=24.4
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
++|+|++|......+.=...|.++.+.|.+.||.++.
T Consensus 4 ~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~ 40 (343)
T 1e4e_A 4 IKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLY 40 (343)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred cEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEE
Confidence 4677765544433333234688899999999998774
No 214
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=28.69 E-value=72 Score=24.31 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=23.3
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
|+.|+|+ |...+.... -.|..|+..||++|..++
T Consensus 1 M~vi~v~-s~kgG~GKT--t~a~~la~~la~~g~~vl 34 (206)
T 4dzz_A 1 MKVISFL-NPKGGSGKT--TAVINIATALSRSGYNIA 34 (206)
T ss_dssp CEEEEEC-CSSTTSSHH--HHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEE-eCCCCccHH--HHHHHHHHHHHHCCCeEE
Confidence 4567766 445555544 467899999999986554
No 215
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=28.69 E-value=2.3e+02 Score=22.71 Aligned_cols=46 Identities=22% Similarity=0.252 Sum_probs=36.1
Q ss_pred hhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC-CCCchHHHHHHHH
Q 027287 114 KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-DGYYNSLLTFIDK 166 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~-~g~w~~l~~~l~~ 166 (225)
+..++||+..|+.+-|-=+...+ ..+|||=+-. .++++.+..++..
T Consensus 61 ~g~~ViIa~AG~aa~LpgvvA~~-------t~~PVIgVP~~~~~l~G~daLlS~ 107 (174)
T 3lp6_A 61 RGLEVIIAGAGGAAHLPGMVAAA-------TPLPVIGVPVPLGRLDGLDSLLSI 107 (174)
T ss_dssp HTCCEEEEEEESSCCHHHHHHHH-------CSSCEEEEEECCSSGGGHHHHHHH
T ss_pred CCCCEEEEecCchhhhHHHHHhc-------cCCCEEEeeCCCCCCCCHHHHHHH
Confidence 45789999999999999888777 4799986543 4788777776653
No 216
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=28.65 E-value=82 Score=26.61 Aligned_cols=41 Identities=22% Similarity=0.331 Sum_probs=24.0
Q ss_pred eEEE-EeCCCCCCCh--------HHHHHHHHHHHHHHhCC---CeEEEcCCCcc
Q 027287 21 RICV-FCGSSAGKKS--------TYKDAAIELGKELVARN---IDLVYGGGSVG 62 (225)
Q Consensus 21 ~V~V-fggs~~~~~~--------~~~~~A~~lG~~LA~~G---~~lv~GGg~~G 62 (225)
+|.| +|||...... ...+.|+++..+.. .| ..||.|||+.+
T Consensus 25 ~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~-~G~~~vViVhGgG~~~ 77 (286)
T 3d40_A 25 FLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAE-TYRGRMVLISGGGAFG 77 (286)
T ss_dssp EEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHH-HTTTSEEEEECCCCC-
T ss_pred EEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHH-cCCCeEEEEECCHHHH
Confidence 3444 7777654321 45556666665543 34 56889999743
No 217
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=28.22 E-value=1.6e+02 Score=24.98 Aligned_cols=72 Identities=14% Similarity=0.234 Sum_probs=41.8
Q ss_pred HHHHHHHhhCCEEEEec--CCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc
Q 027287 107 QRKAEMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA 184 (225)
Q Consensus 107 ~Rk~~mv~~sDa~Ivlp--GG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~ 184 (225)
+....++..||++|.-. .|+|+- +.|++. .++|||..+..++ .+ .+ .......++-.
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~--~~Eama------~G~PvI~~~~~~~----~e----~i-----~~~~~g~~~~~ 375 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLV--AMEAQA------SGTPVIAARVGGL----PI----AV-----AEGETGLLVDG 375 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHH--HHHHHH------TTCCEEEESCTTH----HH----HS-----CBTTTEEEESS
T ss_pred HHHHHHHHhCCEEEECccccCCchH--HHHHHH------cCCCEEecCCCCh----hH----Hh-----hCCCcEEECCC
Confidence 34456778999877543 244532 445553 6899999876432 12 22 11222334444
Q ss_pred CCHHHHHHHHHhhcC
Q 027287 185 PNAKELMNKMEEYFP 199 (225)
Q Consensus 185 ~d~ee~~~~l~~~~~ 199 (225)
+|++++.+.|.+...
T Consensus 376 ~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 376 HSPHAWADALATLLD 390 (438)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHc
Confidence 689998888877643
No 218
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=28.13 E-value=2.5e+02 Score=23.07 Aligned_cols=66 Identities=15% Similarity=0.184 Sum_probs=38.3
Q ss_pred HHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCH
Q 027287 108 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNA 187 (225)
Q Consensus 108 Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ 187 (225)
...-++..||++|. |. |+. +.|++. .++|+|..+..+....+ ++.| .-+.+-.|+
T Consensus 275 ~~~~~~~~ad~~v~-~s--g~~--~lEA~a------~G~Pvi~~~~~~~~~e~-------v~~g-------~g~~v~~d~ 329 (375)
T 3beo_A 275 DFHNVAARSYLMLT-DS--GGV--QEEAPS------LGVPVLVLRDTTERPEG-------IEAG-------TLKLAGTDE 329 (375)
T ss_dssp HHHHHHHTCSEEEE-CC--HHH--HHHHHH------HTCCEEECSSCCSCHHH-------HHTT-------SEEECCSCH
T ss_pred HHHHHHHhCcEEEE-CC--CCh--HHHHHh------cCCCEEEecCCCCCcee-------ecCC-------ceEEcCCCH
Confidence 34556788999864 54 333 556663 47999987432223332 2222 112332588
Q ss_pred HHHHHHHHhhc
Q 027287 188 KELMNKMEEYF 198 (225)
Q Consensus 188 ee~~~~l~~~~ 198 (225)
+++.+.|.+..
T Consensus 330 ~~la~~i~~ll 340 (375)
T 3beo_A 330 ETIFSLADELL 340 (375)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888777654
No 219
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=27.90 E-value=24 Score=33.05 Aligned_cols=47 Identities=26% Similarity=0.304 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCeEEEcCCC----------ccHHHHHHHHHHhcCCeEEEE--eCCc
Q 027287 39 AAIELGKELVARNIDLVYGGGS----------VGLMGLISQAVYDGGRHVIGV--IPKT 85 (225)
Q Consensus 39 ~A~~lG~~LA~~G~~lv~GGg~----------~GlM~a~a~gA~~aGG~viGI--iP~~ 85 (225)
-|+.|++.|.++|+.||+||-. .|+-+..+..+++.-|.++-- +|..
T Consensus 343 NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D 401 (490)
T 3ou5_A 343 NARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGD 401 (490)
T ss_dssp HHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTC
T ss_pred HHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCC
Confidence 3667788888899999998732 477778788888876665443 4543
No 220
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=27.85 E-value=64 Score=25.45 Aligned_cols=15 Identities=7% Similarity=0.018 Sum_probs=9.6
Q ss_pred CCHHHHHHHHHhhcC
Q 027287 185 PNAKELMNKMEEYFP 199 (225)
Q Consensus 185 ~d~ee~~~~l~~~~~ 199 (225)
-+|+|+.+.+.....
T Consensus 194 ~~~~dvA~~i~~l~~ 208 (230)
T 3guy_A 194 MSAEDAALMIHGALA 208 (230)
T ss_dssp CCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHh
Confidence 467777777765443
No 221
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=27.81 E-value=64 Score=25.83 Aligned_cols=18 Identities=28% Similarity=0.233 Sum_probs=11.1
Q ss_pred HHHHHHHHhCCCeEEEcC
Q 027287 41 IELGKELVARNIDLVYGG 58 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~GG 58 (225)
+.+++.|+++|+.|+..+
T Consensus 17 ~a~a~~l~~~G~~V~~~~ 34 (235)
T 3l6e_A 17 RALTIGLVERGHQVSMMG 34 (235)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEE
Confidence 456666666777766444
No 222
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.77 E-value=1.4e+02 Score=24.35 Aligned_cols=61 Identities=16% Similarity=0.075 Sum_probs=0.0
Q ss_pred hcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC-CccHHHHHHHHHHhcCCeEEEE
Q 027287 13 MNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG-SVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 13 ~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg-~~GlM~a~a~gA~~aGG~viGI 81 (225)
....-+.++|-|.|+++ -..+.+++.|+++|+.|+.... ....-+.+.+...+.|+.+..+
T Consensus 22 ~~~~l~~k~vlVTGas~--------gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (269)
T 4dmm_A 22 TALPLTDRIALVTGASR--------GIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83 (269)
T ss_dssp --CTTTTCEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccCCCCCEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEE
No 223
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.75 E-value=30 Score=29.76 Aligned_cols=34 Identities=26% Similarity=0.475 Sum_probs=23.6
Q ss_pred CCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 116 SDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 116 sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
.|.+ +.-||=||+.|+...+. + ...+.|+.+++.
T Consensus 81 ~d~v-vv~GGDGTv~~v~~~l~--~-~~~~~pl~iIP~ 114 (337)
T 2qv7_A 81 YDVL-IAAGGDGTLNEVVNGIA--E-KPNRPKLGVIPM 114 (337)
T ss_dssp CSEE-EEEECHHHHHHHHHHHT--T-CSSCCEEEEEEC
T ss_pred CCEE-EEEcCchHHHHHHHHHH--h-CCCCCcEEEecC
Confidence 4554 45689999999987762 1 124689988864
No 224
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=27.71 E-value=54 Score=31.56 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=40.3
Q ss_pred CCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 31 GKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 31 ~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.|..+-..+.-++..|+..|+.++++|+..- +.+++.|.+.+..++|+
T Consensus 518 g~Da~Hd~ga~~va~~l~~aGfeVi~~g~~~t--ee~v~aa~e~~adiv~l 566 (637)
T 1req_B 518 GTRRDFGGREGFSSPVWHIAGIDTPQVEGGTT--AEIVEAFKKSGAQVADL 566 (637)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCBCCEEECCCH--HHHHHHHHHHTCSEEEE
T ss_pred CCchhhhhhHHHHHHHHHhCCeeEEeCCCCCC--HHHHHHHHhcCCCEEEE
Confidence 33446666666777788899999999988745 99999999999999999
No 225
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=27.67 E-value=1.8e+02 Score=24.49 Aligned_cols=83 Identities=11% Similarity=0.032 Sum_probs=46.3
Q ss_pred CHHHHHHHHHh--hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCc-----------------hHHHHHH
Q 027287 104 DMHQRKAEMAK--HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY-----------------NSLLTFI 164 (225)
Q Consensus 104 ~m~~Rk~~mv~--~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w-----------------~~l~~~l 164 (225)
++.+=-+.|.+ ..++++...=+.|+.+|....+--. ..+|||+++....-- ..-..+-
T Consensus 186 ~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~G~~~~~g~~~~Htga~~~~~~g~~~~~~ 262 (288)
T 2nu8_A 186 NFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE---HVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKF 262 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH---HCCSCEEEEEECTTCCTTCCCSSTTCCCCTTCCCHHHHH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEeCCCCcccccccchhhhhccCCccHHHHH
Confidence 44444444443 3457777776778887776544222 257999998542111 0100011
Q ss_pred HHHHHcCCCCccccCcEEEcCCHHHHHHHHHhhc
Q 027287 165 DKAVEEGFISPNARHIIVSAPNAKELMNKMEEYF 198 (225)
Q Consensus 165 ~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~~ 198 (225)
.-+.+.| ++.++|++|+.+.+++.+
T Consensus 263 aa~~~aG---------v~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 263 AALEAAG---------VKTVRSLADIGEALKTVL 287 (288)
T ss_dssp HHHHHTT---------CEECSSGGGHHHHHHHHC
T ss_pred HHHHHCC---------CeEeCCHHHHHHHHHHHh
Confidence 1122223 567999999999888753
No 226
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=27.64 E-value=50 Score=25.38 Aligned_cols=31 Identities=13% Similarity=0.138 Sum_probs=20.4
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHh-CCCe
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVA-RNID 53 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~-~G~~ 53 (225)
++|.|+.+|..++ -.+.|+.+.+.|.+ .|+.
T Consensus 2 mkilii~~S~~g~---t~~la~~i~~~l~~~~g~~ 33 (198)
T 3b6i_A 2 AKVLVLYYSMYGH---IETMARAVAEGASKVDGAE 33 (198)
T ss_dssp CEEEEEECCSSSH---HHHHHHHHHHHHHTSTTCE
T ss_pred CeEEEEEeCCCcH---HHHHHHHHHHHHhhcCCCE
Confidence 4566666776543 23578888888877 6754
No 227
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=27.55 E-value=94 Score=25.49 Aligned_cols=37 Identities=22% Similarity=0.325 Sum_probs=25.3
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE-EcCCC
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV-YGGGS 60 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv-~GGg~ 60 (225)
....++||+|+|.... + -+.=+.|.++|+.|. ||-|.
T Consensus 7 ~~~l~~avVCaSN~NR-S------MEaH~~L~k~G~~V~SfGTGs 44 (198)
T 3p9y_A 7 PSKLAVAVVDSSNMNR-S------MEAHNFLAKKGFNVRSYGTGE 44 (198)
T ss_dssp TTCCEEEEEESSSSSH-H------HHHHHHHHHTTCEEEEEECSS
T ss_pred CCCceEEEEcCCCCcc-c------HHHHHHHHhCCCceeecCCCc
Confidence 4567899999877632 2 233456788999988 55554
No 228
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=27.46 E-value=3e+02 Score=23.75 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=39.0
Q ss_pred HHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCCH
Q 027287 108 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNA 187 (225)
Q Consensus 108 Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ 187 (225)
....++..||++|. +.| |+..|.. ..++|+|+.+..+-+..+ ++.|. .+.+-.|+
T Consensus 300 ~~~~l~~~ad~vv~-~SG-g~~~EA~---------a~G~PvV~~~~~~~~~e~-------v~~G~-------~~lv~~d~ 354 (396)
T 3dzc_A 300 PFVYLMDRAHIILT-DSG-GIQEEAP---------SLGKPVLVMRETTERPEA-------VAAGT-------VKLVGTNQ 354 (396)
T ss_dssp HHHHHHHHCSEEEE-SCS-GGGTTGG---------GGTCCEEECCSSCSCHHH-------HHHTS-------EEECTTCH
T ss_pred HHHHHHHhcCEEEE-CCc-cHHHHHH---------HcCCCEEEccCCCcchHH-------HHcCc-------eEEcCCCH
Confidence 35567899999754 434 4443443 257999998433444332 33331 13333578
Q ss_pred HHHHHHHHhhc
Q 027287 188 KELMNKMEEYF 198 (225)
Q Consensus 188 ee~~~~l~~~~ 198 (225)
+++.+.+.+..
T Consensus 355 ~~l~~ai~~ll 365 (396)
T 3dzc_A 355 QQICDALSLLL 365 (396)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98888887765
No 229
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=27.44 E-value=1.6e+02 Score=24.24 Aligned_cols=68 Identities=24% Similarity=0.345 Sum_probs=39.2
Q ss_pred HHHHhhCCEEEEec--CCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEE-cCC
Q 027287 110 AEMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVS-APN 186 (225)
Q Consensus 110 ~~mv~~sDa~Ivlp--GG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~-~~d 186 (225)
..++..||++|.-. .|+|+- +.|+++ .++|+|..+..|.-+-+ ++- ..| .++- ..|
T Consensus 265 ~~~~~~ad~~v~ps~~e~~~~~--~~Ea~a------~G~Pvi~~~~~~~~e~i----~~~-~~g--------~~~~~~~~ 323 (374)
T 2iw1_A 265 SELMAAADLLLHPAYQEAAGIV--LLEAIT------AGLPVLTTAVCGYAHYI----ADA-NCG--------TVIAEPFS 323 (374)
T ss_dssp HHHHHHCSEEEECCSCCSSCHH--HHHHHH------HTCCEEEETTSTTTHHH----HHH-TCE--------EEECSSCC
T ss_pred HHHHHhcCEEEeccccCCcccH--HHHHHH------CCCCEEEecCCCchhhh----ccC-Cce--------EEeCCCCC
Confidence 44678899877643 244432 444553 47999998875543222 111 111 2222 348
Q ss_pred HHHHHHHHHhhc
Q 027287 187 AKELMNKMEEYF 198 (225)
Q Consensus 187 ~ee~~~~l~~~~ 198 (225)
++++.+.|.+..
T Consensus 324 ~~~l~~~i~~l~ 335 (374)
T 2iw1_A 324 QEQLNEVLRKAL 335 (374)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888888764
No 230
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=27.32 E-value=91 Score=26.40 Aligned_cols=36 Identities=11% Similarity=-0.011 Sum_probs=28.1
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCC
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARN 51 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G 51 (225)
..+.++|+|||||=++.+--+...++++.+.+...+
T Consensus 4 ~~~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~ 39 (279)
T 1kqn_A 4 SEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTG 39 (279)
T ss_dssp --CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTS
T ss_pred CCCCceEEEEEeeecHhhHHHHHHHHHHHHHhcccC
Confidence 467789999999999888888888887777776655
No 231
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.31 E-value=65 Score=26.08 Aligned_cols=30 Identities=20% Similarity=0.142 Sum_probs=25.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 8 k~vlVTGas~-GIG~aia~~l~~~G~~V~~~ 37 (252)
T 3h7a_A 8 ATVAVIGAGD-YIGAEIAKKFAAEGFTVFAG 37 (252)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 4678999985 99999999999999988876
No 232
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=27.22 E-value=20 Score=25.61 Aligned_cols=43 Identities=14% Similarity=0.309 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHcCCCCccccCcEEEc-----CCHHHHHHHHHhhcCCcccc
Q 027287 158 NSLLTFIDKAVEEGFISPNARHIIVSA-----PNAKELMNKMEEYFPQHERV 204 (225)
Q Consensus 158 ~~l~~~l~~~~~~gfi~~~~~~~i~~~-----~d~ee~~~~l~~~~~~~~~~ 204 (225)
+.++..+.+.+. .+.-.++|++- ++|+++++.+++|++....+
T Consensus 34 d~ll~~f~~~te----HP~gSDLIfyP~~~~e~spE~Iv~~ik~wRa~~G~p 81 (86)
T 1fr2_A 34 VKLVTHFAEMTE----HPSGSDLIYYPKEGDDDSPSGIVNTVKQWRAANGKS 81 (86)
T ss_dssp HHHHHHHHHHHC----CTTTTHHHHSCCTTCCCSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcC----CCCcCceeecCCCCCCCCHHHHHHHHHHHHHHcCCc
Confidence 445555554432 34455666554 68999999999998765433
No 233
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.22 E-value=2.4e+02 Score=22.55 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=23.4
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
+.++|+++..+. .++-+.+....+-+.+.+.|+.++.
T Consensus 3 ~~~~I~~i~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~ 39 (305)
T 3g1w_A 3 LNETYMMITFQS--GMDYWKRCLKGFEDAAQALNVTVEY 39 (305)
T ss_dssp --CEEEEEESST--TSTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEccC--CChHHHHHHHHHHHHHHHcCCEEEE
Confidence 346788875443 3566666666677777777877765
No 234
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=27.16 E-value=2.7e+02 Score=23.13 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC----------ccHHHHHHHHHHhcCCeEEEEeCCccc
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS----------VGLMGLISQAVYDGGRHVIGVIPKTLM 87 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~----------~GlM~a~a~gA~~aGG~viGIiP~~~~ 87 (225)
+.++|-|.|+++. ..+.+++.|+++|+.|+..+-. ..-.+.+.+...+.|+.+..+
T Consensus 26 ~gk~vlVTGas~G--------IG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 91 (322)
T 3qlj_A 26 DGRVVIVTGAGGG--------IGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD------ 91 (322)
T ss_dssp TTCEEEETTTTSH--------HHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEE------
T ss_pred CCCEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEE------
Q ss_pred cCCCCCCCCceEeecCCHHHHHHHHHhhCCEEEEecCCcc-------cHHHHHHHHHHHHhC
Q 027287 88 PREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYG-------TLEELLEVITWAQLG 142 (225)
Q Consensus 88 ~~e~~~~~~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~G-------TL~Ei~~a~~~~qlg 142 (225)
.-.+++.-....+.++-.--...-|++|-..|-.. |.+++-..+..+-.+
T Consensus 92 -----~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g 148 (322)
T 3qlj_A 92 -----GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKG 148 (322)
T ss_dssp -----CCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHH
T ss_pred -----ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
No 235
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=27.15 E-value=1.2e+02 Score=19.87 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=19.5
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
.+-+.|.|+|.+. ..|...++.|.+.||.
T Consensus 39 ~~~~~ivv~C~~g--------~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 39 DKNDTVKVYCNAG--------RQSGQAKEILSEMGYT 67 (85)
T ss_dssp CTTSEEEEEESSS--------HHHHHHHHHHHHTTCS
T ss_pred CCCCcEEEEcCCC--------chHHHHHHHHHHcCCC
Confidence 4556899999653 1345667777788874
No 236
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=27.12 E-value=2.5e+02 Score=22.78 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=31.4
Q ss_pred CCcEEEEeCCCC--chHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhhc
Q 027287 145 DKPVGLLNVDGY--YNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEYF 198 (225)
Q Consensus 145 ~kPiill~~~g~--w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~~ 198 (225)
+.|++..++-+- ++++++.++.+.+.|.----....+.-..||.++++.+.+..
T Consensus 202 ~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~ 257 (273)
T 2qjg_A 202 PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIV 257 (273)
T ss_dssp SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHH
Confidence 689988765432 556666666555555421112233444568888877777643
No 237
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=27.05 E-value=1.3e+02 Score=21.90 Aligned_cols=74 Identities=14% Similarity=0.065 Sum_probs=35.4
Q ss_pred CCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecC--CHHHHHHHHHhhCCEEEEecCCc
Q 027287 50 RNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVA--DMHQRKAEMAKHSDAFIALPGGY 126 (225)
Q Consensus 50 ~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~--~m~~Rk~~mv~~sDa~IvlpGG~ 126 (225)
+++.+|.|.|+.|. .+++...+.|-.+++|-.+...-.......+ ..+..+ +-..-+..-+..+|++|+.-+--
T Consensus 7 ~~~viIiG~G~~G~--~la~~L~~~g~~v~vid~~~~~~~~~~~~g~-~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 7 CNHALLVGYGRVGS--LLGEKLLASDIPLVVIETSRTRVDELRERGV-RAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CSCEEEECCSHHHH--HHHHHHHHTTCCEEEEESCHHHHHHHHHTTC-EEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCCEEEECcCHHHH--HHHHHHHHCCCCEEEEECCHHHHHHHHHcCC-CEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 46777777765332 3455555667777777433211001111111 222222 22222222356789988876654
No 238
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=27.01 E-value=1.9e+02 Score=21.42 Aligned_cols=69 Identities=23% Similarity=0.201 Sum_probs=41.6
Q ss_pred HHHHHhhCCEEEEec--CCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEcCC
Q 027287 109 KAEMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPN 186 (225)
Q Consensus 109 k~~mv~~sDa~Ivlp--GG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d 186 (225)
...++..||++|... .|+|+- +.|++. .++|+|..+.. .+.+ . + ......++-.+|
T Consensus 109 ~~~~~~~ad~~l~ps~~e~~~~~--~~Ea~a------~G~PvI~~~~~----~~~e----~-----~-~~~~g~~~~~~~ 166 (200)
T 2bfw_A 109 VRELYGSVDFVIIPSYFEPFGLV--ALEAMC------LGAIPIASAVG----GLRD----I-----I-TNETGILVKAGD 166 (200)
T ss_dssp HHHHHTTCSEEEECCSCCSSCHH--HHHHHH------TTCEEEEESCH----HHHH----H-----C-CTTTCEEECTTC
T ss_pred HHHHHHHCCEEEECCCCCCccHH--HHHHHH------CCCCEEEeCCC----ChHH----H-----c-CCCceEEecCCC
Confidence 445678899988754 244433 555553 68999987643 2222 2 2 122334444569
Q ss_pred HHHHHHHHHhhcC
Q 027287 187 AKELMNKMEEYFP 199 (225)
Q Consensus 187 ~ee~~~~l~~~~~ 199 (225)
++++.+.|.+...
T Consensus 167 ~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 167 PGELANAILKALE 179 (200)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999998887654
No 239
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=26.99 E-value=34 Score=29.56 Aligned_cols=37 Identities=11% Similarity=0.181 Sum_probs=24.4
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
++|+|.+|......+.=...|+.+.+.|.+.||.++.
T Consensus 4 ~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~ 40 (364)
T 2i87_A 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDI 40 (364)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEE
T ss_pred cEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEE
Confidence 4677766544332232235678899999999998774
No 240
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.90 E-value=82 Score=26.81 Aligned_cols=30 Identities=27% Similarity=0.345 Sum_probs=21.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEe
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVI 82 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIi 82 (225)
...|+.| | .|-+-.+++.....+-.++||-
T Consensus 77 d~vi~~G-G-DGT~l~a~~~~~~~~~pvlgi~ 106 (307)
T 1u0t_A 77 ELVLVLG-G-DGTFLRAAELARNASIPVLGVN 106 (307)
T ss_dssp CCEEEEE-C-HHHHHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEe-C-CHHHHHHHHHhccCCCCEEEEe
Confidence 3444444 5 5999888888877777889984
No 241
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=26.84 E-value=2.5e+02 Score=22.73 Aligned_cols=17 Identities=12% Similarity=0.188 Sum_probs=10.2
Q ss_pred HHHHHHHHhCCCeEEEc
Q 027287 41 IELGKELVARNIDLVYG 57 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~G 57 (225)
+.+++.|+++|+.|+..
T Consensus 45 ~aia~~la~~G~~V~~~ 61 (271)
T 3v2g_A 45 AAIAKRLALEGAAVALT 61 (271)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 45666666667666543
No 242
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=26.72 E-value=1.6e+02 Score=23.49 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.+++.|.|+++. ..+.+++.|+++|+.|+..+....-.+.+.+...+.|+.+..+
T Consensus 6 ~~k~~lVTGas~g--------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 61 (247)
T 2jah_A 6 QGKVALITGASSG--------IGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVL 61 (247)
T ss_dssp TTCEEEEESCSSH--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
No 243
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=26.71 E-value=1.2e+02 Score=24.37 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.++|-|.|+++. ..+.+++.|+++|+.|+..+-..---+.+.+...+.|+.+..+
T Consensus 28 ~~k~vlITGas~g--------IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 83 (262)
T 3rkr_A 28 SGQVAVVTGASRG--------IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESH 83 (262)
T ss_dssp TTCEEEESSTTSH--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCCh--------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEE
No 244
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=26.69 E-value=1.8e+02 Score=24.01 Aligned_cols=71 Identities=20% Similarity=0.251 Sum_probs=43.0
Q ss_pred HHHHHHHhhCCEEEEec---------CCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccc
Q 027287 107 QRKAEMAKHSDAFIALP---------GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNA 177 (225)
Q Consensus 107 ~Rk~~mv~~sDa~Ivlp---------GG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~ 177 (225)
+....++..||++|... .|+|+ =+.|++. .++|+|.-+..+. .+ ++...
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~--~~~Ea~a------~G~PvI~~~~~~~-~e------------~i~~~- 321 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGI--VYLEAQA------CGVPVIAGTSGGA-PE------------TVTPA- 321 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCH--HHHHHHH------TTCCEEECSSTTG-GG------------GCCTT-
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCc--HHHHHHH------cCCCEEEeCCCCh-HH------------HHhcC-
Confidence 44455678999988743 44443 2455553 6899999765432 22 22222
Q ss_pred cCcEEEcCCHHHHHHHHHhhcC
Q 027287 178 RHIIVSAPNAKELMNKMEEYFP 199 (225)
Q Consensus 178 ~~~i~~~~d~ee~~~~l~~~~~ 199 (225)
...++-.+|++++.+.|.+...
T Consensus 322 ~g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 322 TGLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp TEEECCTTCHHHHHHHHHHHHT
T ss_pred CceEeCCCCHHHHHHHHHHHHh
Confidence 2333334599999999988754
No 245
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=26.51 E-value=3.1e+02 Score=23.64 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=25.0
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhC-CCeE--EEcCC
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVAR-NIDL--VYGGG 59 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~-G~~l--v~GGg 59 (225)
.+|++|+++.|++. .|... ..|-+.|.++ ++.+ +.+|.
T Consensus 23 ~~m~ki~~v~Gtr~----~~~~~-a~li~~l~~~~~~~~~~~~tG~ 63 (396)
T 3dzc_A 23 NAMKKVLIVFGTRP----EAIKM-APLVQQLCQDNRFVAKVCVTGQ 63 (396)
T ss_dssp -CCEEEEEEECSHH----HHHHH-HHHHHHHHHCTTEEEEEEECCS
T ss_pred CCCCeEEEEEeccH----hHHHH-HHHHHHHHhCCCCcEEEEEecc
Confidence 45678999988774 56655 5688888876 5543 44543
No 246
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=26.49 E-value=2.7e+02 Score=23.70 Aligned_cols=101 Identities=15% Similarity=0.017 Sum_probs=51.6
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhc-CCeEEEEeCCccccCCCCCCCCc
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDG-GRHVIGVIPKTLMPREITGETVG 97 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~a-GG~viGIiP~~~~~~e~~~~~~~ 97 (225)
.+.|++.-||+.....--.+.=.++++.|.++|+.+|.=|++ + -...++...+. +..++
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~-~-e~~~~~~i~~~~~~~~~------------------ 244 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGP-M-DLEMVQPVVEQMETKPI------------------ 244 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCT-T-THHHHHHHHHTCSSCCE------------------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCc-c-hHHHHHHHHHhcccccE------------------
Confidence 457888777764321100112246777777778888765554 3 23333333221 11110
Q ss_pred eEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEE
Q 027287 98 EVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL 151 (225)
Q Consensus 98 ~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill 151 (225)
.+.-..++.+ ...++..||++|..=.|.-.| +.+ .++|++.+
T Consensus 245 ~l~g~~sl~e-~~ali~~a~~~i~~DsG~~Hl---Aaa--------~g~P~v~l 286 (349)
T 3tov_A 245 VATGKFQLGP-LAAAMNRCNLLITNDSGPMHV---GIS--------QGVPIVAL 286 (349)
T ss_dssp ECTTCCCHHH-HHHHHHTCSEEEEESSHHHHH---HHT--------TTCCEEEE
T ss_pred EeeCCCCHHH-HHHHHHhCCEEEECCCCHHHH---HHh--------cCCCEEEE
Confidence 1111234444 455678899988765544443 111 47888865
No 247
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.48 E-value=47 Score=24.89 Aligned_cols=35 Identities=26% Similarity=0.273 Sum_probs=25.3
Q ss_pred HHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCe
Q 027287 43 LGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRH 77 (225)
Q Consensus 43 lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~ 77 (225)
+.+.+.......+|-+||.+.|+++.+.+.+.|-+
T Consensus 99 l~~~~~~~~~~~vy~CGP~~Mm~av~~~l~~~~~~ 133 (142)
T 3lyu_A 99 VRELLESEDWDLVFMVGPVGDQKQVFEVVKEYGVP 133 (142)
T ss_dssp HHHHHHSSCCSEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred HHHhcccCCCCEEEEECCHHHHHHHHHHHHHcCCc
Confidence 44555554556676677889999999988887754
No 248
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=26.47 E-value=69 Score=25.81 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=20.3
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 24 ~vlITGas~-gIG~~la~~l~~~G~~V~~~ 52 (251)
T 3orf_A 24 NILVLGGSG-ALGAEVVKFFKSKSWNTISI 52 (251)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 567777763 77777777777777776665
No 249
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=26.46 E-value=64 Score=28.10 Aligned_cols=37 Identities=11% Similarity=0.319 Sum_probs=24.8
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHH-HhCCCeEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKEL-VARNIDLVY 56 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~L-A~~G~~lv~ 56 (225)
++|+|++|......+.=...|.++.+.| .+.||.++.
T Consensus 4 ~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~ 41 (377)
T 1ehi_A 4 KRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIV 41 (377)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEE
T ss_pred cEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEE
Confidence 4677765544332332245689999999 899998774
No 250
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=26.44 E-value=69 Score=25.71 Aligned_cols=28 Identities=29% Similarity=0.439 Sum_probs=14.2
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 5 vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 32 (247)
T 3dii_A 5 VIVTGGGH-GIGKQICLDFLEAGDKVCFI 32 (247)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 35555543 55555555555555554443
No 251
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=26.43 E-value=2.1e+02 Score=22.90 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=29.5
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc-CCCccHHHHHHHHHHhcCCeEEEE
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG-GGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G-Gg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.++|-|.|+++ + ..+.+++.|+++|+.|+.. ......-+.+.+...+.|+.+..+
T Consensus 8 ~k~vlVTGas~-G-------IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (259)
T 3edm_A 8 NRTIVVAGAGR-D-------IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63 (259)
T ss_dssp TCEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEE
T ss_pred CCEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEE
Confidence 34666665544 2 2456788888899988754 322222233333333345554444
No 252
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=26.28 E-value=77 Score=24.13 Aligned_cols=17 Identities=18% Similarity=0.116 Sum_probs=7.4
Q ss_pred HHHHHHHHHHhCCCeEE
Q 027287 39 AAIELGKELVARNIDLV 55 (225)
Q Consensus 39 ~A~~lG~~LA~~G~~lv 55 (225)
.+.++-+.|.+.|..++
T Consensus 105 a~~~l~~~l~~~G~~~~ 121 (173)
T 2fcr_A 105 AIEEIHDCFAKQGAKPV 121 (173)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 33444444444444443
No 253
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=26.17 E-value=1.5e+02 Score=24.07 Aligned_cols=63 Identities=10% Similarity=0.087 Sum_probs=0.0
Q ss_pred hhhcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc-CCCccHHHHHHHHHHhcCCeEEEE
Q 027287 11 MEMNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG-GGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 11 ~~~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G-Gg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..+.+..+.+++-|-|+++- ..+.+++.|+++|+.++.- ......-+.+.+...+.|+.+..+
T Consensus 19 ~~~~m~~~~k~~lVTGas~G--------IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (267)
T 3u5t_A 19 YFQSMMETNKVAIVTGASRG--------IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA 82 (267)
T ss_dssp --------CCEEEEESCSSH--------HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccCCCEEEEeCCCCH--------HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEE
No 254
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=26.07 E-value=56 Score=27.23 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=12.7
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEE
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIG 80 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viG 80 (225)
.|||||+. |+=.+.++...+.|.+|+.
T Consensus 14 alVTGas~-GIG~aia~~la~~Ga~V~~ 40 (261)
T 4h15_A 14 ALITAGTK-GAGAATVSLFLELGAQVLT 40 (261)
T ss_dssp EEESCCSS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEeccCc-HHHHHHHHHHHHcCCEEEE
Confidence 34455443 5544455544444544443
No 255
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=26.04 E-value=1.3e+02 Score=27.01 Aligned_cols=30 Identities=10% Similarity=0.144 Sum_probs=20.5
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhC
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVAR 50 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~ 50 (225)
.+++|+|+.-.. ++...+.+.++.++|.++
T Consensus 40 ~~k~V~II~n~~---~~~~~~~~~~l~~~L~~~ 69 (388)
T 3afo_A 40 PLQNVYITKKPW---TPSTREAMVEFITHLHES 69 (388)
T ss_dssp CCCEEEEEECTT---CHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCC---CHHHHHHHHHHHHHHHHh
Confidence 467899996422 465667777777777665
No 256
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=25.92 E-value=60 Score=26.23 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=19.9
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~ 60 (225)
+++-|.|+++ + ..+.+++.|+++|+.|+.-+-.
T Consensus 8 k~~lVTGas~-G-------IG~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 8 GLAIITGASQ-G-------IGAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHHTCEEEEEESC
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEECC
Confidence 4555665543 2 2356777777888887755443
No 257
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=25.80 E-value=3e+02 Score=23.20 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=41.5
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCe-EEEEeCCcc---ccCCCCCCCCceEeec----CCHHHHHHHHH--hhCCEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRH-VIGVIPKTL---MPREITGETVGEVKPV----ADMHQRKAEMA--KHSDAFI 120 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~-viGIiP~~~---~~~e~~~~~~~~~~~~----~~m~~Rk~~mv--~~sDa~I 120 (225)
...+|+|+|..|++ +..-|+..|.. |+++-.+.. .-++. .....+..+. .++.++-..+. ...|+++
T Consensus 181 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 181 DPVLICGAGPIGLI--TMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp CCEEEECCSHHHHH--HHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 56778887655544 55667777876 777743321 01112 1111111111 11222211111 1358888
Q ss_pred EecCCcccHHHHHHHH
Q 027287 121 ALPGGYGTLEELLEVI 136 (225)
Q Consensus 121 vlpGG~GTL~Ei~~a~ 136 (225)
-..|+-.|+++....+
T Consensus 258 d~~g~~~~~~~~~~~l 273 (363)
T 3m6i_A 258 ECTGVESSIAAAIWAV 273 (363)
T ss_dssp ECSCCHHHHHHHHHHS
T ss_pred ECCCChHHHHHHHHHh
Confidence 8888777777666544
No 258
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=25.80 E-value=71 Score=25.98 Aligned_cols=18 Identities=11% Similarity=0.111 Sum_probs=12.1
Q ss_pred HHHHHHHHHhCCCeEEEc
Q 027287 40 AIELGKELVARNIDLVYG 57 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~G 57 (225)
.+.+++.|+++|+.|+.-
T Consensus 23 G~~ia~~l~~~G~~V~~~ 40 (287)
T 3pxx_A 23 GRSHAVKLAEEGADIILF 40 (287)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEE
Confidence 356777777778777643
No 259
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=25.79 E-value=70 Score=26.12 Aligned_cols=30 Identities=10% Similarity=0.104 Sum_probs=19.0
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG 57 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G 57 (225)
+++-|-|+++ + ..+.+++.|+++|+.|+.-
T Consensus 12 k~~lVTGas~-G-------IG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 12 RVAFITGAAR-G-------QGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCcc-H-------HHHHHHHHHHHcCCEEEEE
Confidence 4566665543 2 2456777788888887754
No 260
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=25.72 E-value=67 Score=26.30 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=11.6
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEE
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIG 80 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viG 80 (225)
.|||||+. |+=.++++...+.|-+|+.
T Consensus 19 vlVTGas~-gIG~aia~~l~~~G~~V~~ 45 (266)
T 3p19_A 19 VVITGASS-GIGEAIARRFSEEGHPLLL 45 (266)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEE
Confidence 34444442 4444444444444444433
No 261
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=25.67 E-value=72 Score=25.69 Aligned_cols=32 Identities=19% Similarity=0.122 Sum_probs=20.4
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+-
T Consensus 13 k~vlVTGas~-g-------IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 13 RIILVTGASD-G-------IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC-h-------HHHHHHHHHHHCCCEEEEEeC
Confidence 4566665544 2 245677788888888775543
No 262
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=25.66 E-value=1.8e+02 Score=23.99 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=0.0
Q ss_pred HHhhhcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 9 MEMEMNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 9 ~~~~~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.|...+..-..+++++-|++.+ ..+.+++.|+++|+.|+..+-..---+.+.+...+.|+.+..+
T Consensus 20 ~~m~~~m~~l~gk~vlVTGas~g-------IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 85 (301)
T 3tjr_A 20 GSMDGFLSGFDGRAAVVTGGASG-------IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV 85 (301)
T ss_dssp ----CCCCCSTTCEEEEETTTSH-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccchhHHhccCCCEEEEeCCCCH-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEE
No 263
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=25.64 E-value=73 Score=25.63 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=19.9
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 7 k~vlVTGas~g--------IG~a~a~~l~~~G~~V~~~~r 38 (247)
T 3rwb_A 7 KTALVTGAAQG--------IGKAIAARLAADGATVIVSDI 38 (247)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 45666655431 245677777888888775543
No 264
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=25.62 E-value=72 Score=25.97 Aligned_cols=31 Identities=10% Similarity=0.048 Sum_probs=19.4
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|-|-|+++. ..+.+++.|+++|+.|+.-+
T Consensus 14 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAARG--------QGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCh--------HHHHHHHHHHHCCCeEEEEe
Confidence 45666655442 23567777888888877543
No 265
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=25.61 E-value=69 Score=26.80 Aligned_cols=50 Identities=14% Similarity=0.231 Sum_probs=30.0
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCC-CCCcEEEEeCC--CCc-----hHHHHHHHHHHH
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVD--GYY-----NSLLTFIDKAVE 169 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~-~~kPiill~~~--g~w-----~~l~~~l~~~~~ 169 (225)
.+|.+|+ -||=||+.+++..+. +. .++|++-+|.+ ||. +++.+.++.+.+
T Consensus 35 ~~D~vv~-lGGDGT~l~aa~~~~----~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 35 EPEIVIS-IGGDGTFLSAFHQYE----ERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAK 92 (272)
T ss_dssp SCSEEEE-EESHHHHHHHHHHTG----GGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHT
T ss_pred CCCEEEE-EcCcHHHHHHHHHHh----hcCCCCCEEEEeCCCCCcCCcCCHHHHHHHHHHHHc
Confidence 4566555 578999999886552 11 26897766652 555 344555555443
No 266
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=25.59 E-value=80 Score=26.99 Aligned_cols=41 Identities=10% Similarity=0.134 Sum_probs=25.2
Q ss_pred ccCCcceEEEEeCCCCCC-------ChHHHHHHHHHHHHHHhCCCeEE
Q 027287 15 NQSKFNRICVFCGSSAGK-------KSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~-------~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
+..+|++|++++..-.+. .--....+.+|++.|+++||.+.
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~ 63 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVD 63 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEE
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEE
Confidence 456778999997543221 01123457899999999988664
No 267
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=25.56 E-value=1.4e+02 Score=23.51 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=0.0
Q ss_pred ccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 15 NQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.-+.++|-|.|+++. ..+.+++.|+++|+.|+.-+-...--+.+.+...+.+.++..+
T Consensus 1 m~l~~k~vlITGas~g--------IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (247)
T 3lyl_A 1 MSLNEKVALVTGASRG--------IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL 59 (247)
T ss_dssp CTTTTCEEEESSCSSH--------HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCEEEEECCCCh--------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
No 268
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=25.36 E-value=83 Score=24.74 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=25.1
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhC-CCeEE
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVAR-NIDLV 55 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~-G~~lv 55 (225)
++++.|+|++ ...+.... -.|..||..||++ |+.++
T Consensus 2 ~~~~vI~v~s-~kGGvGKT--t~a~~LA~~la~~~g~~Vl 38 (245)
T 3ea0_A 2 NAKRVFGFVS-AKGGDGGS--CIAANFAFALSQEPDIHVL 38 (245)
T ss_dssp -CCEEEEEEE-SSTTSSHH--HHHHHHHHHHTTSTTCCEE
T ss_pred CCCeEEEEEC-CCCCcchH--HHHHHHHHHHHhCcCCCEE
Confidence 4567788874 44455554 4688999999998 87766
No 269
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=25.33 E-value=56 Score=27.35 Aligned_cols=29 Identities=28% Similarity=0.368 Sum_probs=25.5
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.+.++...+.|.+|+..
T Consensus 11 valVTGas~-GIG~aiA~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 11 KALVTGANT-GLGQAIAVGLAAAGAEVVCA 39 (247)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCcCC-HHHHHHHHHHHHcCCEEEEE
Confidence 578999986 99999999999999998765
No 270
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=25.25 E-value=33 Score=28.00 Aligned_cols=130 Identities=17% Similarity=0.164 Sum_probs=65.8
Q ss_pred eEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC-ccHHH---HHHHHHHhcCCeEEEEeCCccccCCCCCC-C
Q 027287 21 RICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS-VGLMG---LISQAVYDGGRHVIGVIPKTLMPREITGE-T 95 (225)
Q Consensus 21 ~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~-~GlM~---a~a~gA~~aGG~viGIiP~~~~~~e~~~~-~ 95 (225)
.|.+|---...++++|...+..|.. ..+-+.+|+|-|. .++=+ ++...+.+.|-+|.++.|+.......... +
T Consensus 24 ~v~~~~~~~~~~~~~~~~a~~~l~~--s~~~~~iv~g~ggs~~~~~~~a~L~~~a~~~Gr~V~vLAp~~~s~~~l~~~~~ 101 (189)
T 2l8b_A 24 RVTVHPEKSVPRTAGYSDAVSVLAQ--DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDER 101 (189)
T ss_dssp TCCCCGGGCCCCHHHHHHHHHHHHH--HSCCEECCBCSSCSHHHHHHHHHHHHHHHHTTCCEEEECSTTHHHHHHSCTTT
T ss_pred CcccCCcCccccCccchhHHHHHhc--cCCceEEEecccchHHHHHHHHHHHHHHHhcCeEEEEEcCchHHHHHHHhhcC
Confidence 3445533334445666654443332 3356777766543 34444 56677888899999999886422211111 0
Q ss_pred CceEeecCCHHHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCC
Q 027287 96 VGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD 154 (225)
Q Consensus 96 ~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~ 154 (225)
.....+..+.......=....|.+||=.+.-=++.|....+.-.. .++-.+||+|..
T Consensus 102 l~~~t~t~~~ll~~~~~~tp~s~lIVD~AekLS~kE~~~Lld~A~--~~naqvvll~~~ 158 (189)
T 2l8b_A 102 LSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA--RHNVQVLITDSG 158 (189)
T ss_dssp CSSCSSSTTTTTTTSCCCCCCCEEEEEESSSHHHHHHHHHHHHHH--HTTCCEEEEESS
T ss_pred cCcceeehhhhhcCCCCCCCCCEEEEechhhcCHHHHHHHHHHHH--hcCCEEEEeCCc
Confidence 000011110000000000234566666677777777776664333 356788888753
No 271
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=25.22 E-value=60 Score=26.48 Aligned_cols=20 Identities=25% Similarity=0.297 Sum_probs=13.6
Q ss_pred HHHHHHHHHhCCCeEEEcCC
Q 027287 40 AIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg 59 (225)
.+++++.|+++|+.|+..+-
T Consensus 25 G~~~a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 25 GFEICKQLSSNGIMVVLTCR 44 (311)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 35677777778888775543
No 272
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=25.13 E-value=1.9e+02 Score=24.34 Aligned_cols=32 Identities=25% Similarity=0.127 Sum_probs=21.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIP 83 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP 83 (225)
...+|+|++ +|+=.+++.-|...|.+|+++-.
T Consensus 168 ~~vlV~Gas-g~iG~~~~~~a~~~G~~Vi~~~~ 199 (343)
T 2eih_A 168 DDVLVMAAG-SGVSVAAIQIAKLFGARVIATAG 199 (343)
T ss_dssp CEEEECSTT-STTHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEeC
Confidence 456788883 24444566777788889988754
No 273
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=24.95 E-value=2e+02 Score=22.96 Aligned_cols=32 Identities=6% Similarity=-0.044 Sum_probs=20.4
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 8 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 8 KVCLVTGAGGN--------IGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 46666655441 245677788888888775543
No 274
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=24.91 E-value=2.8e+02 Score=22.47 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=24.8
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
+.++|+|+.... .++-|.+....+-+.+.++|+.++.
T Consensus 2 ~~~~Igvi~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~ 38 (330)
T 3uug_A 2 DKGSVGIAMPTK--SSARWIDDGNNIVKQLQEAGYKTDL 38 (330)
T ss_dssp CCCEEEEEECCS--SSTHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCC--cchHHHHHHHHHHHHHHHcCCEEEE
Confidence 456899887543 2566666666677777777877654
No 275
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=24.78 E-value=21 Score=30.45 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=23.3
Q ss_pred ceEEE-EeCCCCCCChHHHHHHHHHHHHHHhCCC--eEEEcCCC
Q 027287 20 NRICV-FCGSSAGKKSTYKDAAIELGKELVARNI--DLVYGGGS 60 (225)
Q Consensus 20 ~~V~V-fggs~~~~~~~~~~~A~~lG~~LA~~G~--~lv~GGg~ 60 (225)
++|.| +|||...........++++.. |.+.|+ .||.|||+
T Consensus 37 k~iVIKlGGs~l~~~~~~~~~~~~i~~-l~~~G~~vViVhGgG~ 79 (298)
T 2rd5_A 37 KTIVVKYGGAAMTSPELKSSVVSDLVL-LACVGLRPILVHGGGP 79 (298)
T ss_dssp CEEEEEECTHHHHCHHHHHHHHHHHHH-HHHTTCEEEEEECCHH
T ss_pred CEEEEEECchhhCChhHHHHHHHHHHH-HHHCCCCEEEEECCcH
Confidence 44555 777765432334455666654 445665 57799865
No 276
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=24.74 E-value=1e+02 Score=26.93 Aligned_cols=14 Identities=21% Similarity=0.525 Sum_probs=11.4
Q ss_pred HhhCCEEEEecCCc
Q 027287 113 AKHSDAFIALPGGY 126 (225)
Q Consensus 113 v~~sDa~IvlpGG~ 126 (225)
...+|++|+++||.
T Consensus 90 ~~~~d~IIavGGGs 103 (387)
T 3bfj_A 90 REQCDIIVTVGGGS 103 (387)
T ss_dssp HTTCCEEEEEESHH
T ss_pred hcCCCEEEEeCCcc
Confidence 35679999999975
No 277
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=24.68 E-value=49 Score=29.07 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=26.5
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
++|+|.+|......+.=...|..+.+.|-+.||.++
T Consensus 5 ~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~ 40 (372)
T 3tqt_A 5 LHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLIS 40 (372)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEE
Confidence 467775555544456666789999999988899876
No 278
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=24.64 E-value=65 Score=23.40 Aligned_cols=29 Identities=21% Similarity=0.327 Sum_probs=17.6
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
.+.+.|.|||.+.. .|...+..|.+.||.
T Consensus 80 ~~~~~ivvyC~~G~--------rs~~aa~~L~~~G~~ 108 (129)
T 1tq1_A 80 GQSDNIIVGCQSGG--------RSIKATTDLLHAGFT 108 (129)
T ss_dssp CTTSSEEEEESSCS--------HHHHHHHHHHHHHCC
T ss_pred CCCCeEEEECCCCc--------HHHHHHHHHHHcCCC
Confidence 34567999997642 234455556666664
No 279
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=24.61 E-value=37 Score=28.62 Aligned_cols=31 Identities=16% Similarity=0.546 Sum_probs=22.1
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
++|.|+||+...-.+ +.-+||.|+..|+.+.
T Consensus 86 ~~vlVlcG~GNNGGD-----Glv~AR~L~~~G~~V~ 116 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ-----GISCGRHLANHDVQVI 116 (259)
T ss_dssp CEEEEEECSSHHHHH-----HHHHHHHHHHTTCEEE
T ss_pred CeEEEEECCCCCHHH-----HHHHHHHHHHCCCeEE
Confidence 589999996542123 3468888999999863
No 280
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=24.46 E-value=78 Score=25.62 Aligned_cols=32 Identities=19% Similarity=0.381 Sum_probs=20.7
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+-
T Consensus 9 k~~lVTGas~-g-------IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGTH-G-------MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCSS-H-------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEeC
Confidence 4566665543 2 245677888888988875543
No 281
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=24.34 E-value=76 Score=26.37 Aligned_cols=17 Identities=12% Similarity=0.034 Sum_probs=10.9
Q ss_pred HHHHHHHHhCCCeEEEc
Q 027287 41 IELGKELVARNIDLVYG 57 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~G 57 (225)
+.+++.|+++|+.|+.-
T Consensus 42 ~aia~~la~~G~~V~~~ 58 (299)
T 3t7c_A 42 RSHAITLAREGADIIAI 58 (299)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 45666667777776643
No 282
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.33 E-value=78 Score=25.92 Aligned_cols=18 Identities=11% Similarity=0.088 Sum_probs=11.7
Q ss_pred HHHHHHHHHhCCCeEEEc
Q 027287 40 AIELGKELVARNIDLVYG 57 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~G 57 (225)
.+.+++.|+++|+.|+.-
T Consensus 24 G~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 24 GRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEE
Confidence 345667777777776643
No 283
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=24.31 E-value=3.4e+02 Score=23.26 Aligned_cols=31 Identities=13% Similarity=0.122 Sum_probs=20.5
Q ss_pred HHHHcCCCC-cc-ccCcEEEcCCHHHHHHHHHh
Q 027287 166 KAVEEGFIS-PN-ARHIIVSAPNAKELMNKMEE 196 (225)
Q Consensus 166 ~~~~~gfi~-~~-~~~~i~~~~d~ee~~~~l~~ 196 (225)
+++.+|-++ .. .....+-.++..++++.+.+
T Consensus 349 ~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~ 381 (398)
T 1kol_A 349 QAIMWDRINIAEVVGVQVISLDDAPRGYGEFDA 381 (398)
T ss_dssp HHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHH
T ss_pred HHHHcCCCCCccceeEEEEcHHHHHHHHHHHhC
Confidence 456777776 22 23456667888888888865
No 284
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.30 E-value=1.4e+02 Score=24.17 Aligned_cols=61 Identities=10% Similarity=0.079 Sum_probs=0.0
Q ss_pred hcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC-CccHHHHHHHHHHhcCCeEEEE
Q 027287 13 MNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG-SVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 13 ~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg-~~GlM~a~a~gA~~aGG~viGI 81 (225)
..+.-+.++|.|.|+++. ..+++++.|+++|+.|+.-+. ....-+++.+...+.|.++.-+
T Consensus 23 ~~m~l~~k~vlITGas~g--------IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (271)
T 4iin_A 23 NAMQFTGKNVLITGASKG--------IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVI 84 (271)
T ss_dssp -CCCCSCCEEEETTCSSH--------HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhcccCCCEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEE
No 285
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=24.30 E-value=1.3e+02 Score=21.76 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=24.6
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDL 54 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 54 (225)
.++++|.|+||+..++ .+. .+.++=+.+.+.|+.+
T Consensus 19 ~~~kkIlvvC~sG~gT--S~l-l~~kl~~~~~~~gi~~ 53 (113)
T 1tvm_A 19 GSKRKIIVACGGAVAT--STM-AAEEIKELCQSHNIPV 53 (113)
T ss_dssp CSSEEEEEESCSCSSH--HHH-HHHHHHHHHHHTTCCE
T ss_pred ccccEEEEECCCCHHH--HHH-HHHHHHHHHHHcCCeE
Confidence 3556899999998863 221 3567777888888764
No 286
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.21 E-value=78 Score=25.98 Aligned_cols=30 Identities=23% Similarity=0.293 Sum_probs=25.7
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 32 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGSR-GIGAAIAKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 4688999985 99999999999999888776
No 287
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.19 E-value=91 Score=23.81 Aligned_cols=11 Identities=9% Similarity=0.250 Sum_probs=5.3
Q ss_pred hhCCEEEEecC
Q 027287 114 KHSDAFIALPG 124 (225)
Q Consensus 114 ~~sDa~IvlpG 124 (225)
...|++|-+.|
T Consensus 60 ~~~d~vi~~ag 70 (221)
T 3ew7_A 60 SDQNVVVDAYG 70 (221)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 34455555444
No 288
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=24.18 E-value=78 Score=26.00 Aligned_cols=31 Identities=29% Similarity=0.406 Sum_probs=26.1
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEe
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVI 82 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIi 82 (225)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 32 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 32 RTAVVTGAGS-GIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEc
Confidence 4678999985 999999999999999887763
No 289
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=24.18 E-value=60 Score=26.77 Aligned_cols=30 Identities=30% Similarity=0.421 Sum_probs=25.7
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 34 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 63 (275)
T 4imr_A 34 RTALVTGSSR-GIGAAIAEGLAGAGAHVILH 63 (275)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4678899985 99999999999999988776
No 290
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=24.17 E-value=81 Score=25.29 Aligned_cols=28 Identities=29% Similarity=0.382 Sum_probs=14.5
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 10 vlVTGas~-giG~~ia~~l~~~G~~V~~~ 37 (250)
T 2fwm_X 10 VWVTGAGK-GIGYATALAFVEAGAKVTGF 37 (250)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 45555542 55555555555555555444
No 291
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=24.17 E-value=16 Score=26.05 Aligned_cols=44 Identities=9% Similarity=0.190 Sum_probs=28.0
Q ss_pred chHHHHHHHHHHHcCCCCccccCcEEEc-----CCHHHHHHHHHhhcCCcccc
Q 027287 157 YNSLLTFIDKAVEEGFISPNARHIIVSA-----PNAKELMNKMEEYFPQHERV 204 (225)
Q Consensus 157 w~~l~~~l~~~~~~gfi~~~~~~~i~~~-----~d~ee~~~~l~~~~~~~~~~ 204 (225)
.+.++..+.+. +-.+.-.++|++- ++|+++++.+++|++....+
T Consensus 32 ~d~ll~~f~~~----teHP~gSDLIfyP~~~~e~spE~Iv~~ik~wRa~~g~p 80 (85)
T 1gxg_A 32 QDDNLEHFISV----TEHPSGSDLIYYPEGNNDGSPEAVIKEIKEWRAANGKS 80 (85)
T ss_dssp HHHHHHHHHHT----TCCTTTTHHHHSCCTTCCSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHh----cCCCCcCceeecCCCCCCCCHHHHHHHHHHHHHHcCCc
Confidence 44455444433 3345556666654 68999999999998765433
No 292
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=24.12 E-value=80 Score=25.55 Aligned_cols=32 Identities=16% Similarity=0.073 Sum_probs=20.5
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 14 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 14 RVVLITGGGSG--------LGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 45666655431 245677788888988775543
No 293
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=24.10 E-value=49 Score=29.26 Aligned_cols=37 Identities=8% Similarity=0.102 Sum_probs=25.6
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
++|+|.+|......+.=...|.++.+.|-+.||.++.
T Consensus 38 ~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~ 74 (383)
T 3k3p_A 38 ETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKT 74 (383)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEE
Confidence 4677755544444454457888899999888998773
No 294
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.09 E-value=80 Score=25.46 Aligned_cols=31 Identities=3% Similarity=0.052 Sum_probs=20.1
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+
T Consensus 9 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 9 KSALITGSARG--------IGRAFAEAYVREGATVAIAD 39 (259)
T ss_dssp CEEEEETCSSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEe
Confidence 46666655432 24567778888898877554
No 295
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=24.06 E-value=1.3e+02 Score=24.65 Aligned_cols=41 Identities=27% Similarity=0.477 Sum_probs=22.7
Q ss_pred ceEEE-EeCCCCCCC------h-HHHHHHHHHHHHHHhCCC--eEEEcCCCc
Q 027287 20 NRICV-FCGSSAGKK------S-TYKDAAIELGKELVARNI--DLVYGGGSV 61 (225)
Q Consensus 20 ~~V~V-fggs~~~~~------~-~~~~~A~~lG~~LA~~G~--~lv~GGg~~ 61 (225)
++|.| ||||....+ + ...+.|+++.++ .+.|+ .||.|||+.
T Consensus 13 ~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l-~~~G~~vViV~GgG~~ 63 (255)
T 2jjx_A 13 KRVLIKLSGGALADQTGNSFNSKRLEHIANEILSI-VDLGIEVSIVIGGGNI 63 (255)
T ss_dssp SEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHH-HTTTCEEEEEECCTTT
T ss_pred CEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHCCCeEEEEECchHH
Confidence 34444 888876531 2 334444444433 23565 678999875
No 296
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=24.01 E-value=79 Score=26.01 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=18.7
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+
T Consensus 6 k~~lVTGas~-G-------IG~aia~~la~~G~~V~~~~ 36 (281)
T 3zv4_A 6 EVALITGGAS-G-------LGRALVDRFVAEGARVAVLD 36 (281)
T ss_dssp CEEEEETCSS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCcCEEEEEe
Confidence 4555665443 1 24567777778888777544
No 297
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=23.94 E-value=2.2e+02 Score=23.86 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=23.7
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~ 60 (225)
.++|.|.|+|+. ....+++.|+++|+.|+..+-.
T Consensus 8 ~k~vlVTGas~g--------IG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGANG--------VGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTTST--------HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCchH--------HHHHHHHHHHHCCCEEEEEECC
Confidence 357777766543 2457888889999998765543
No 298
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=23.89 E-value=1.3e+02 Score=20.43 Aligned_cols=30 Identities=10% Similarity=0.244 Sum_probs=20.9
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
+-+.|.|||.+. ..|...+..|.+.||.+.
T Consensus 55 ~~~~ivvyC~~g--------~rs~~a~~~L~~~G~~v~ 84 (100)
T 3foj_A 55 DNETYYIICKAG--------GRSAQVVQYLEQNGVNAV 84 (100)
T ss_dssp TTSEEEEECSSS--------HHHHHHHHHHHTTTCEEE
T ss_pred CCCcEEEEcCCC--------chHHHHHHHHHHCCCCEE
Confidence 456899999554 135667788888898654
No 299
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=23.87 E-value=82 Score=25.24 Aligned_cols=32 Identities=6% Similarity=0.141 Sum_probs=20.4
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+..+-
T Consensus 8 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGANG--------IGRAIAERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH--------HHHHHHHHHHHCCCEEEEEcC
Confidence 46666655441 245677778888888775543
No 300
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=23.76 E-value=2.1e+02 Score=22.82 Aligned_cols=33 Identities=15% Similarity=0.009 Sum_probs=22.4
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 9 ~k~vlVTGas~g--------iG~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 9 GCTALVTGGSRG--------IGYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp TCEEEEESCSSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 356777766542 245678888889999876543
No 301
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=23.73 E-value=81 Score=25.67 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=19.3
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 31 k~vlVTGas~G--------IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGAGG--------LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh--------HHHHHHHHHHHCCCEEEEEeC
Confidence 45566654432 245677777778888775543
No 302
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=23.73 E-value=84 Score=24.99 Aligned_cols=15 Identities=27% Similarity=0.167 Sum_probs=8.0
Q ss_pred HHHHHHHHhCCCeEE
Q 027287 41 IELGKELVARNIDLV 55 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv 55 (225)
+.+++.|+++|+.|+
T Consensus 15 ~~~a~~l~~~G~~V~ 29 (257)
T 1fjh_A 15 AATRKVLEAAGHQIV 29 (257)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCEEE
Confidence 345555555566554
No 303
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=23.71 E-value=41 Score=28.97 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=25.0
Q ss_pred hhCCEEEEecCCcccHHHHHHHHHHHHhC-CCCCcEEEEeC
Q 027287 114 KHSDAFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLLNV 153 (225)
Q Consensus 114 ~~sDa~IvlpGG~GTL~Ei~~a~~~~qlg-~~~kPiill~~ 153 (225)
+..|.+| .-||=||+.|+...+.- .. ..+.|+.+++.
T Consensus 81 ~~~d~vv-v~GGDGTl~~v~~~l~~--~~~~~~~plgiiP~ 118 (332)
T 2bon_A 81 FGVATVI-AGGGDGTINEVSTALIQ--CEGDDIPALGILPL 118 (332)
T ss_dssp HTCSEEE-EEESHHHHHHHHHHHHH--CCSSCCCEEEEEEC
T ss_pred cCCCEEE-EEccchHHHHHHHHHhh--cccCCCCeEEEecC
Confidence 4467555 46899999999988742 21 24678887753
No 304
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=23.70 E-value=74 Score=25.97 Aligned_cols=30 Identities=17% Similarity=0.089 Sum_probs=20.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 28 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 57 (260)
T 3gem_A 28 APILITGASQ-RVGLHCALRLLEHGHRVIIS 57 (260)
T ss_dssp CCEEESSTTS-HHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4567777763 77777777777777776665
No 305
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=23.69 E-value=45 Score=28.30 Aligned_cols=34 Identities=24% Similarity=0.197 Sum_probs=22.8
Q ss_pred CCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 116 SDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 116 sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
.|. |+.-||=||++|+...+.- . ..+.|+.++..
T Consensus 64 ~d~-vv~~GGDGTl~~v~~~l~~--~-~~~~~l~iiP~ 97 (304)
T 3s40_A 64 VDL-IIVFGGDGTVFECTNGLAP--L-EIRPTLAIIPG 97 (304)
T ss_dssp CSE-EEEEECHHHHHHHHHHHTT--C-SSCCEEEEEEC
T ss_pred CCE-EEEEccchHHHHHHHHHhh--C-CCCCcEEEecC
Confidence 454 5556899999999877621 0 14578888753
No 306
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=23.65 E-value=81 Score=25.97 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=30.6
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC-CccHHHHHHHHHHhcCCeEEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG-SVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg-~~GlM~a~a~gA~~aGG~viGI 81 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+. ...-.+.+.+...+.|+.+..+
T Consensus 30 k~~lVTGas~-G-------IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T 4da9_A 30 PVAIVTGGRR-G-------IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84 (280)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEecCCC-H-------HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 4555565443 2 245678888888998765442 3233344444444556666665
No 307
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=23.62 E-value=68 Score=25.84 Aligned_cols=20 Identities=10% Similarity=0.139 Sum_probs=14.1
Q ss_pred HHHHHHHHHhCCCeEEEcCC
Q 027287 40 AIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg 59 (225)
.+.+++.|+++|+.|+.-+.
T Consensus 22 G~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 22 GKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 45677788888888775443
No 308
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=23.53 E-value=82 Score=25.87 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=25.9
Q ss_pred hCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 49 ARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 49 ~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+....|||||+. |+=.++++...+.|-+|+.+
T Consensus 23 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 54 (279)
T 3sju_A 23 RPQTAFVTGVSS-GIGLAVARTLAARGIAVYGC 54 (279)
T ss_dssp --CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 345789999985 99999999988999888776
No 309
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=23.49 E-value=2.9e+02 Score=23.27 Aligned_cols=89 Identities=13% Similarity=0.062 Sum_probs=45.1
Q ss_pred CHHHHHHHHHh--hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCC-----c-
Q 027287 104 DMHQRKAEMAK--HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFIS-----P- 175 (225)
Q Consensus 104 ~m~~Rk~~mv~--~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~-----~- 175 (225)
++.+=-+.+.+ ..++++...=+.|+.+|.+..+. +....+|||+++... -..+--.- +-..|-+- .
T Consensus 193 ~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~--~~~~~~KPVv~~k~G-~s~~~~~~---~sHtgal~~~~~g~~ 266 (297)
T 2yv2_A 193 SFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMI--KKGEFTKPVIAYIAG-RTAPPEKR---MGHAGAIIMMGTGTY 266 (297)
T ss_dssp CHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHH--HTTSCCSCEEEEESC-CC---------------------CSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHH--HhccCCCCEEEEEeC-CCCccccc---cCCccccccCCCCCH
Confidence 45444444544 34466666667788777654442 221357999998753 22211000 11112111 0
Q ss_pred -----c-ccCcEEEcCCHHHHHHHHHhhc
Q 027287 176 -----N-ARHIIVSAPNAKELMNKMEEYF 198 (225)
Q Consensus 176 -----~-~~~~i~~~~d~ee~~~~l~~~~ 198 (225)
- ...=++.++|++|+.+.++..+
T Consensus 267 ~~~~aa~~~aGv~~v~~~~el~~~~~~~~ 295 (297)
T 2yv2_A 267 EGKVKALREAGVEVAETPFEVPELVRKAL 295 (297)
T ss_dssp HHHHHHHHTTTCEEESSGGGHHHHHHHHC
T ss_pred HHHHHHHHHcCCeEeCCHHHHHHHHHHHh
Confidence 0 0122678999999999887754
No 310
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=23.45 E-value=48 Score=24.57 Aligned_cols=29 Identities=28% Similarity=0.425 Sum_probs=18.3
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
.+-+.|.|||.+.. . +...+..|.+.||.
T Consensus 80 ~~~~~ivvyC~~G~--r------S~~aa~~L~~~G~~ 108 (137)
T 1qxn_A 80 DPEKPVVVFCKTAA--R------AALAGKTLREYGFK 108 (137)
T ss_dssp CTTSCEEEECCSSS--C------HHHHHHHHHHHTCS
T ss_pred CCCCeEEEEcCCCc--H------HHHHHHHHHHcCCc
Confidence 35568999997654 2 23455666667873
No 311
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=23.37 E-value=1.1e+02 Score=25.44 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=24.8
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
.++++.|+|+ + ..+.... -.|..||..||++|..++
T Consensus 38 ~~~~~vI~v~-~-KGGvGKT--T~a~nLA~~La~~G~~Vl 73 (307)
T 3end_A 38 ITGAKVFAVY-G-KGGIGKS--TTSSNLSAAFSILGKRVL 73 (307)
T ss_dssp --CCEEEEEE-C-STTSSHH--HHHHHHHHHHHHTTCCEE
T ss_pred cCCceEEEEE-C-CCCccHH--HHHHHHHHHHHHCCCeEE
Confidence 3456788888 5 4444443 467899999999988765
No 312
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=23.36 E-value=83 Score=25.93 Aligned_cols=19 Identities=16% Similarity=0.480 Sum_probs=13.2
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+.-+
T Consensus 38 G~~ia~~la~~G~~V~~~~ 56 (281)
T 3v2h_A 38 GLAIARTLAKAGANIVLNG 56 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567777778888777554
No 313
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=23.36 E-value=1.5e+02 Score=24.94 Aligned_cols=30 Identities=20% Similarity=0.242 Sum_probs=26.1
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
-..|||||+. |+=.+.++...+.|.+|+..
T Consensus 30 KvalVTGas~-GIG~aiA~~la~~Ga~V~i~ 59 (273)
T 4fgs_A 30 KIAVITGATS-GIGLAAAKRFVAEGARVFIT 59 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCcCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4789999985 99999999999999988765
No 314
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=23.35 E-value=3.1e+02 Score=24.65 Aligned_cols=130 Identities=15% Similarity=0.240 Sum_probs=62.6
Q ss_pred CCCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCc------cccC-CCCCCCCceEeecCC---HHHHHHHHHh--hCC
Q 027287 50 RNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKT------LMPR-EITGETVGEVKPVAD---MHQRKAEMAK--HSD 117 (225)
Q Consensus 50 ~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~------~~~~-e~~~~~~~~~~~~~~---m~~Rk~~mv~--~sD 117 (225)
++..++|-|| |+--.+++.+.+.|+.+--+-|.. ..|. -..+|++ |+.-..+ +...-+.+.+ ..|
T Consensus 294 ~rvaiitngG--G~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPl-Dl~g~a~~~~~~~al~~~l~dp~vd 370 (457)
T 2csu_A 294 NKVAIMTNAG--GPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPV-DMIASARGEDYYRTAKLLLQDPNVD 370 (457)
T ss_dssp SEEEEEESCH--HHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEE-ECCTTCCHHHHHHHHHHHHHSTTCS
T ss_pred CcEEEEECCH--HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCe-eCCCCCCHHHHHHHHHHHhcCCCCC
Confidence 3456676665 566667888888888652211100 0111 1123333 2211122 2233333433 457
Q ss_pred EEEEe--cCCcc-c-----HHHHHHHHHHHHhCCCCCcEEEEeCCC-CchHHHHHHHHHHHcCCCCccccCcEEEcCCHH
Q 027287 118 AFIAL--PGGYG-T-----LEELLEVITWAQLGIHDKPVGLLNVDG-YYNSLLTFIDKAVEEGFISPNARHIIVSAPNAK 188 (225)
Q Consensus 118 a~Ivl--pGG~G-T-----L~Ei~~a~~~~qlg~~~kPiill~~~g-~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~e 188 (225)
++++. |+.+| + .+++.+++. ++. .+||+++....| ..+...+ .+.+.| +.+.++++
T Consensus 371 ~vlv~~~~~~~Gg~~~~~~a~~i~~al~--~~~-~~kPvvv~~~~g~~~~~~~~---~L~~~G---------ip~~~spe 435 (457)
T 2csu_A 371 MLIAICVVPTFAGMTLTEHAEGIIRAVK--EVN-NEKPVLAMFMAGYVSEKAKE---LLEKNG---------IPTYERPE 435 (457)
T ss_dssp EEEEEEECCCSTTCCSSHHHHHHHHHHH--HHC-CCCCEEEEEECTTTTHHHHH---HHHTTT---------CCEESSHH
T ss_pred EEEEEccccccccCCchhHHHHHHHHHH--Hhc-CCCCEEEEeCCCcchHHHHH---HHHhCC---------CCccCCHH
Confidence 66552 33332 1 244555553 333 579998843322 1222222 233323 33459999
Q ss_pred HHHHHHHhh
Q 027287 189 ELMNKMEEY 197 (225)
Q Consensus 189 e~~~~l~~~ 197 (225)
++++.+...
T Consensus 436 ~Av~al~~l 444 (457)
T 2csu_A 436 DVASAAYAL 444 (457)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988764
No 315
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=23.33 E-value=74 Score=25.59 Aligned_cols=15 Identities=20% Similarity=0.240 Sum_probs=7.7
Q ss_pred HHHHHHHhCCCeEEE
Q 027287 42 ELGKELVARNIDLVY 56 (225)
Q Consensus 42 ~lG~~LA~~G~~lv~ 56 (225)
.+++.|+++|+.|+.
T Consensus 24 aia~~l~~~G~~V~~ 38 (257)
T 3tl3_A 24 ATTKRLLDAGAQVVV 38 (257)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 445555555555543
No 316
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=23.33 E-value=1.4e+02 Score=24.09 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=26.8
Q ss_pred cccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 14 NNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 14 ~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
...+.++.|+|+ +...+.... -.|..|+..||++|+.++.
T Consensus 13 ~l~~~~~vI~v~-s~kGGvGKT--T~a~nLA~~la~~G~~Vll 52 (262)
T 2ph1_A 13 RLGKIKSRIAVM-SGKGGVGKS--TVTALLAVHYARQGKKVGI 52 (262)
T ss_dssp HHTTCSCEEEEE-CSSSCTTHH--HHHHHHHHHHHHTTCCEEE
T ss_pred hhccCCeEEEEE-cCCCCCCHH--HHHHHHHHHHHHCCCeEEE
Confidence 334445677777 455555554 4678999999999977653
No 317
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=23.31 E-value=2.6e+02 Score=22.45 Aligned_cols=57 Identities=9% Similarity=-0.046 Sum_probs=0.0
Q ss_pred CcceEEEEeCCC-CCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCC-eEEEE
Q 027287 18 KFNRICVFCGSS-AGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGR-HVIGV 81 (225)
Q Consensus 18 ~~~~V~Vfggs~-~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGI 81 (225)
+-|++-|-|+|+ .+ ..+.+++.||++|+.|+.-+-..---+.+.+...+.++ .+..+
T Consensus 5 ~gK~alVTGaa~~~G-------IG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~ 63 (256)
T 4fs3_A 5 ENKTYVIMGIANKRS-------IAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 63 (256)
T ss_dssp TTCEEEEECCCSTTC-------HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEE
T ss_pred CCCEEEEECCCCCch-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEE
No 318
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=23.31 E-value=69 Score=26.86 Aligned_cols=42 Identities=29% Similarity=0.351 Sum_probs=25.0
Q ss_pred cceEEEEeCCCCCCCh--------HHHHHHHHHHHHHHh-------CCCeEEEcCCC
Q 027287 19 FNRICVFCGSSAGKKS--------TYKDAAIELGKELVA-------RNIDLVYGGGS 60 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~--------~~~~~A~~lG~~LA~-------~G~~lv~GGg~ 60 (225)
|..|-=+|||.....+ ...+.|+++.++... ....||.|||+
T Consensus 7 m~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~ 63 (266)
T 3k4o_A 7 MLTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGA 63 (266)
T ss_dssp CEEEEEECTTSSCCTTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHH
T ss_pred eEEEEEEchHHeeCCCccCCcCHHHHHHHHHHHHHHHhccccccCCCCEEEEeCchH
Confidence 3344447777654321 466677777755432 45788899954
No 319
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=23.19 E-value=54 Score=27.39 Aligned_cols=30 Identities=27% Similarity=0.259 Sum_probs=25.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
-..|||||+. |+=.+.++...+.|.+|+..
T Consensus 10 KvalVTGas~-GIG~aia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTGSAR-GLGFAYAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3678999985 99999999999999988765
No 320
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.15 E-value=85 Score=25.46 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=21.4
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~ 60 (225)
.++|-|.|+++ + ..+.+++.|+++|+.|+..+-.
T Consensus 8 ~k~~lVTGas~-G-------IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSS-G-------IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSS-H-------HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCC-h-------HHHHHHHHHHHCCCEEEEEeCC
Confidence 34566665443 2 2456778888889987755543
No 321
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=23.12 E-value=40 Score=26.87 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=0.0
Q ss_pred ccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE
Q 027287 15 NQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDL 54 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 54 (225)
+....++|.|+.+|..++.. +.|+++++.|.+.|+.+
T Consensus 17 ~~~~~~kv~IvY~S~tGnTe---~~A~~ia~~l~~~g~~v 53 (191)
T 1bvy_F 17 ENAHNTPLLVLYGSNMGTAE---GTARDLADIAMSKGFAP 53 (191)
T ss_dssp ----CCCEEEEEECSSSHHH---HHHHHHHHHHHTTTCCC
T ss_pred cccCCCeEEEEEECCChHHH---HHHHHHHHHHHhCCCce
No 322
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=23.08 E-value=87 Score=24.10 Aligned_cols=14 Identities=14% Similarity=-0.028 Sum_probs=9.0
Q ss_pred HHhhCCEEEEecCC
Q 027287 112 MAKHSDAFIALPGG 125 (225)
Q Consensus 112 mv~~sDa~IvlpGG 125 (225)
.+...|++|-+.|-
T Consensus 59 ~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 59 DLDSVDAVVDALSV 72 (224)
T ss_dssp HHTTCSEEEECCCC
T ss_pred hcccCCEEEECCcc
Confidence 34567777777665
No 323
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=22.95 E-value=87 Score=25.20 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=19.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|.|.|+|+. ..+.+++.|+++|+.|+.-+
T Consensus 6 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGARG--------LGAEAARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEe
Confidence 45666655441 24567777778888876544
No 324
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=22.91 E-value=4.1e+02 Score=26.03 Aligned_cols=41 Identities=20% Similarity=0.184 Sum_probs=34.6
Q ss_pred HHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 40 AIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.-++..|+..||.++++|.. =-.+.+++.|.+.+..+||+
T Consensus 621 ~~iVa~~l~~~GfeVi~lG~~-v~~eeiv~aA~e~~adiVgl 661 (762)
T 2xij_A 621 AKVIATGFADLGFDVDIGPLF-QTPREVAQQAVDADVHAVGV 661 (762)
T ss_dssp HHHHHHHHHHTTCEEEECCTT-CCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCeEEeeCCCC-CCHHHHHHHHHHcCCCEEEE
Confidence 455677888999999998875 45688889999999999999
No 325
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=22.91 E-value=2.1e+02 Score=23.78 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=22.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIP 83 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP 83 (225)
...+|+||+ +|+=.+++.-|...|.+|+++-.
T Consensus 142 ~~vlV~Ga~-ggiG~~~~~~a~~~G~~V~~~~~ 173 (327)
T 1qor_A 142 EQFLFHAAA-GGVGLIACQWAKALGAKLIGTVG 173 (327)
T ss_dssp CEEEESSTT-BHHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHHHHHHHcCCEEEEEeC
Confidence 456788864 35555677778888889888754
No 326
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.89 E-value=86 Score=25.61 Aligned_cols=30 Identities=13% Similarity=0.134 Sum_probs=19.1
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG 57 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G 57 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+.-
T Consensus 16 k~~lVTGas~-g-------IG~a~a~~la~~G~~V~~~ 45 (280)
T 3pgx_A 16 RVAFITGAAR-G-------QGRSHAVRLAAEGADIIAC 45 (280)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEE
Confidence 4566665543 1 2456777888888887754
No 327
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=22.84 E-value=86 Score=25.91 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=25.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (283)
T 3v8b_A 29 PVALITGAGS-GIGRATALALAADGVTVGAL 58 (283)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4678999985 99999999988999888776
No 328
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=22.82 E-value=35 Score=27.22 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHh----CCCeEE---EcC-CCccHHHHHHHHHHhcCC
Q 027287 38 DAAIELGKELVA----RNIDLV---YGG-GSVGLMGLISQAVYDGGR 76 (225)
Q Consensus 38 ~~A~~lG~~LA~----~G~~lv---~GG-g~~GlM~a~a~gA~~aGG 76 (225)
+.|+.+|++||+ .|+.=| -|| -+.|-..|++++|.++|-
T Consensus 113 ~AA~~VG~liAeRA~e~GI~~VvFDRgg~~YhGRVkAladaaRe~GL 159 (161)
T 3bbo_Q 113 EVAKKVGEVIASACLEKGITKVAFDRGGYPYHGRVKALADAAREKGL 159 (161)
T ss_dssp HHHHHHHHHSSSHHHHTSSCCCCCCCSSSCSSSTTHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEeCCCCcchHHHHHHHHHHHHhCC
Confidence 568889999886 455433 244 236899999999999884
No 329
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=22.79 E-value=1.5e+02 Score=25.89 Aligned_cols=46 Identities=13% Similarity=0.135 Sum_probs=25.2
Q ss_pred CHHHHHHHHHh--hCCEEEEe--cCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 104 DMHQRKAEMAK--HSDAFIAL--PGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 104 ~m~~Rk~~mv~--~sDa~Ivl--pGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
++.+=-+.|.+ ..++++.. .||.-- .+++ .+.+-...+|||+++..
T Consensus 210 ~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~~~~---~~~r~~~~~KPVV~~ka 259 (334)
T 3mwd_B 210 TFMDHVLRYQDTPGVKMIVVLGEIGGTEE-YKIC---RGIKEGRLTKPIVCWCI 259 (334)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEEESSSSHH-HHHH---HHHHTTSCCSCEEEEEE
T ss_pred CHHHHHHHHhcCCCCCEEEEEEecCChHH-HHHH---HHHHhhcCCCCEEEEEc
Confidence 34444444543 34566666 666633 3333 33343335799999864
No 330
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=22.79 E-value=68 Score=25.52 Aligned_cols=35 Identities=11% Similarity=0.056 Sum_probs=21.8
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.+.++|-|.|+++. ..+.+++.|+++|+.|+.-+.
T Consensus 12 ~~~k~vlVTGas~g--------IG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 12 LTGKTSLITGASSG--------IGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp CTTCEEEETTTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCCh--------HHHHHHHHHHHCCCEEEEEcC
Confidence 34456666655432 245677788888888775543
No 331
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=22.74 E-value=54 Score=27.50 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=31.5
Q ss_pred CChHHHHHHHHHHHHHHhCCC---eEEEc-CCCccHHHHHHH-HHHhc
Q 027287 32 KKSTYKDAAIELGKELVARNI---DLVYG-GGSVGLMGLISQ-AVYDG 74 (225)
Q Consensus 32 ~~~~~~~~A~~lG~~LA~~G~---~lv~G-Gg~~GlM~a~a~-gA~~a 74 (225)
..+.+.+.-+++++.|+++|+ .+|+| ||+..++..+++ ...+.
T Consensus 91 ~~~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~~~l~~~ 138 (260)
T 1v7z_A 91 DGATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGIDLALREL 138 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHHHHHHHh
Confidence 356788889999999999885 46666 445567888777 65543
No 332
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.72 E-value=1e+02 Score=25.00 Aligned_cols=30 Identities=13% Similarity=0.271 Sum_probs=25.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 41 (264)
T 3ucx_A 12 KVVVISGVGP-ALGTTLARRCAEQGADLVLA 41 (264)
T ss_dssp CEEEEESCCT-THHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEECCCc-HHHHHHHHHHHHCcCEEEEE
Confidence 4678999985 99999999999999888776
No 333
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=22.70 E-value=89 Score=25.30 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 9 k~vlVTGas~-GIG~aia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAGR-DIGRACAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 4678999985 99999999998999888776
No 334
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.67 E-value=90 Score=24.96 Aligned_cols=31 Identities=6% Similarity=-0.026 Sum_probs=17.6
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+
T Consensus 6 k~vlVTGas~g--------iG~~ia~~l~~~G~~V~~~~ 36 (245)
T 1uls_A 6 KAVLITGAAHG--------IGRATLELFAKEGARLVACD 36 (245)
T ss_dssp CEEEEESTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEe
Confidence 35666654431 23456666777777766443
No 335
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=22.65 E-value=91 Score=24.73 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=19.0
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|.|.|+|+. ..+.+++.|+++|+.|+.-+
T Consensus 3 k~vlVTGas~g--------iG~~~a~~l~~~G~~V~~~~ 33 (239)
T 2ekp_A 3 RKALVTGGSRG--------IGRAIAEALVARGYRVAIAS 33 (239)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcH--------HHHHHHHHHHHCCCEEEEEe
Confidence 45666655431 24567777777888876544
No 336
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=22.60 E-value=86 Score=24.92 Aligned_cols=29 Identities=31% Similarity=0.298 Sum_probs=20.2
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 9 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (241)
T 1dhr_A 9 RVLVYGGRG-ALGSRCVQAFRARNWWVASI 37 (241)
T ss_dssp EEEEETTTS-HHHHHHHHHHHTTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHhCCCEEEEE
Confidence 567777763 77777777777777776665
No 337
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=22.57 E-value=71 Score=26.15 Aligned_cols=29 Identities=31% Similarity=0.483 Sum_probs=15.3
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 16 ~vlVTGas~-GIG~aia~~l~~~G~~V~~~ 44 (269)
T 3vtz_A 16 VAIVTGGSS-GIGLAVVDALVRYGAKVVSV 44 (269)
T ss_dssp EEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 345555553 55555555555555555444
No 338
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=22.56 E-value=2.9e+02 Score=21.90 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=21.6
Q ss_pred cceEEEEeCCC-CCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 19 FNRICVFCGSS-AGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 19 ~~~V~Vfggs~-~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.++|-|.|+++ .+ ..+.+++.|+++|+.|+..+-
T Consensus 7 ~k~vlVTGasg~~G-------IG~~ia~~l~~~G~~V~~~~r 41 (266)
T 3oig_A 7 GRNIVVMGVANKRS-------IAWGIARSLHEAGARLIFTYA 41 (266)
T ss_dssp TCEEEEECCCSTTS-------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEcCCCCCc-------HHHHHHHHHHHCCCEEEEecC
Confidence 34677776653 23 235677788888988876543
No 339
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=22.54 E-value=94 Score=25.95 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=19.8
Q ss_pred ceEEEEeCC-CCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGS-SAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs-~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
+++-|.|++ +.+ ..+.+++.|+++|+.|+..+
T Consensus 10 k~~lVTGa~~s~G-------IG~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 10 QTAFVAGVADSHG-------YGWAIAKHLASAGARVALGT 42 (315)
T ss_dssp CEEEEECCSSSSS-------HHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEeCCCCCCC-------hHHHHHHHHHHCCCEEEEEe
Confidence 466666652 333 13467777888898877543
No 340
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=22.47 E-value=1.5e+02 Score=26.39 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=21.1
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe--EEEcCC
Q 027287 22 ICVFCGSSAGKKSTYKDAAIELGKELVARNID--LVYGGG 59 (225)
Q Consensus 22 V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~--lv~GGg 59 (225)
|-=||||+....+...+.|..+.+ +.+.|+. ||.||+
T Consensus 5 ViK~GGssl~~~~~i~~v~~~i~~-l~~~g~~~vvV~sa~ 43 (421)
T 3ab4_A 5 VQKYGGSSLESAERIRNVAERIVA-TKKAGNDVVVVCSAM 43 (421)
T ss_dssp EEEECSGGGSSHHHHHHHHHHHHH-HHHTTCEEEEEECCS
T ss_pred EEEEChhHhCCHHHHHHHHHHHHH-HHhCCCCEEEEEcCC
Confidence 334899887643445555555554 3345664 667543
No 341
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ...
Probab=22.46 E-value=1.4e+02 Score=24.14 Aligned_cols=41 Identities=15% Similarity=0.033 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHh----CCCeEE---EcCC---CccHHHHHHHHHHhcCCe
Q 027287 37 KDAAIELGKELVA----RNIDLV---YGGG---SVGLMGLISQAVYDGGRH 77 (225)
Q Consensus 37 ~~~A~~lG~~LA~----~G~~lv---~GGg---~~GlM~a~a~gA~~aGG~ 77 (225)
.+.|+.+|++||+ .|+.=| -||- ++|-..|+++||.++|-.
T Consensus 79 ~~AA~~vG~llA~Ral~kGI~~vvfDrgg~~yh~GgRV~Ala~gAre~GL~ 129 (187)
T 1vq8_N 79 MPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLD 129 (187)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBCEEECTTSCCCTTCHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEcCCCceeccchHHHHHHHHhhcCCEe
Confidence 4678889999987 354322 3542 248999999999998764
No 342
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=22.46 E-value=89 Score=25.52 Aligned_cols=19 Identities=0% Similarity=0.123 Sum_probs=11.8
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+..+
T Consensus 19 G~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 19 GLAIALRAARDGANVAIAA 37 (274)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3456666677777766443
No 343
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=22.43 E-value=90 Score=25.39 Aligned_cols=14 Identities=7% Similarity=0.344 Sum_probs=6.5
Q ss_pred HHHHHHHhCCCeEE
Q 027287 42 ELGKELVARNIDLV 55 (225)
Q Consensus 42 ~lG~~LA~~G~~lv 55 (225)
.+++.|+++|+.|+
T Consensus 23 ~ia~~l~~~G~~V~ 36 (264)
T 2dtx_A 23 AIAERFVDEGSKVI 36 (264)
T ss_dssp HHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCCEEE
Confidence 34444444555444
No 344
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=22.40 E-value=1.6e+02 Score=22.19 Aligned_cols=78 Identities=10% Similarity=0.052 Sum_probs=42.7
Q ss_pred hhCCE-EEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCc--hHHHHHHHHHHHcCCCCccccCcEEE--cCCHH
Q 027287 114 KHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY--NSLLTFIDKAVEEGFISPNARHIIVS--APNAK 188 (225)
Q Consensus 114 ~~sDa-~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w--~~l~~~l~~~~~~gfi~~~~~~~i~~--~~d~e 188 (225)
...|. ++..|=-.|++......+ +.++...+|+++++.+.|.. ..-...++++.+.. ...+-+.+ ..+.+
T Consensus 77 ~~yd~iilG~P~~~g~~~~~~~~f-l~~~~l~gk~v~~f~t~g~~~~g~~~~~l~~~l~~~----~~~~g~~~~g~~~~~ 151 (162)
T 3klb_A 77 EKYEVLFVGFPVWWYIAPTIINTF-LESYDFAGKIVVPFATSGGSGIGNCEKNLHKAYPDI----VWKDGKLLNGQITRD 151 (162)
T ss_dssp GGCSEEEEEEECBTTBCCHHHHHH-HHTSCCTTCEEEEEEECSSCCSHHHHHHHHHHCTTS----EECCCEECCSCCCHH
T ss_pred hhCCEEEEEcccccCCCCHHHHHH-HHhcCCCCCEEEEEEEeCCCCccHHHHHHHHHcCCC----EeecceEEeCCCCHH
Confidence 45675 444565556665544333 23445678999998765432 34455566655421 11122222 34677
Q ss_pred HHHHHHHh
Q 027287 189 ELMNKMEE 196 (225)
Q Consensus 189 e~~~~l~~ 196 (225)
++-++|++
T Consensus 152 ~v~~W~~~ 159 (162)
T 3klb_A 152 LVTEWFEK 159 (162)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 78888875
No 345
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=22.38 E-value=84 Score=25.73 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=19.9
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+..+-
T Consensus 28 k~~lVTGas~-G-------IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 28 KVAFITGGGS-G-------IGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEeCCCc-h-------HHHHHHHHHHHCCCEEEEEeC
Confidence 4556665543 1 345677778888888775543
No 346
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.37 E-value=89 Score=25.71 Aligned_cols=19 Identities=5% Similarity=-0.011 Sum_probs=12.7
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+.-+
T Consensus 40 G~aia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 40 GRATAELFAKNGAYVVVAD 58 (277)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3566777777787776544
No 347
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=22.36 E-value=2.7e+02 Score=22.18 Aligned_cols=75 Identities=17% Similarity=0.096 Sum_probs=37.7
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCCCceEeecCCHH--HHHHHHHhhCCEEEEecCC--ccc
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMH--QRKAEMAKHSDAFIALPGG--YGT 128 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~~~~~~~~~~m~--~Rk~~mv~~sDa~IvlpGG--~GT 128 (225)
.|||||+ +|+=.++++...+.|-.|+.+--... .. . ......+..++. +--..+++..|++|-+.|- ...
T Consensus 6 vlVTGas-g~IG~~la~~L~~~G~~V~~~~r~~~--~~-~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~ 79 (267)
T 3rft_A 6 LLVTGAA-GQLGRVMRERLAPMAEILRLADLSPL--DP-A--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKP 79 (267)
T ss_dssp EEEESTT-SHHHHHHHHHTGGGEEEEEEEESSCC--CC-C--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred EEEECCC-CHHHHHHHHHHHhcCCEEEEEecCCc--cc-c--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCC
Confidence 5778876 36666666666666666665521111 00 0 111222333332 2222345678999988764 334
Q ss_pred HHHHH
Q 027287 129 LEELL 133 (225)
Q Consensus 129 L~Ei~ 133 (225)
.++++
T Consensus 80 ~~~~~ 84 (267)
T 3rft_A 80 FEQIL 84 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 348
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=22.36 E-value=1.1e+02 Score=27.66 Aligned_cols=80 Identities=20% Similarity=0.249 Sum_probs=39.7
Q ss_pred HHHHHHHHhhCC-EEEEecCCcccHHHHHHHHHHHHhCC-CCCcEEEE---eCCCCchHHHHHHHHH---HHcC-CCCcc
Q 027287 106 HQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLL---NVDGYYNSLLTFIDKA---VEEG-FISPN 176 (225)
Q Consensus 106 ~~Rk~~mv~~sD-a~IvlpGG~GTL~Ei~~a~~~~qlg~-~~kPiill---~~~g~w~~l~~~l~~~---~~~g-fi~~~ 176 (225)
.++-...+.... |+|.|.||.|| .+|. .+|+.+=+ +..-|.+-..+.+.++ ..+- +=...
T Consensus 24 ~~~Gl~~i~~gkvavvlLAGG~GT-----------RLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~ 92 (405)
T 3oc9_A 24 YYRGLELISQGKTALITPAGGQGS-----------RLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNV 92 (405)
T ss_dssp HHHHHHHHHTTCEEEEEECCSBCT-----------TTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred HHHHHHHHhcCceEEEEecCCCcc-----------cccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCC
Confidence 344444455555 78889999999 4453 35655444 2223555555444332 2110 00011
Q ss_pred cc--CcEEEcCCHHHHHHHHHh
Q 027287 177 AR--HIIVSAPNAKELMNKMEE 196 (225)
Q Consensus 177 ~~--~~i~~~~d~ee~~~~l~~ 196 (225)
.. -+.....+-++..+++++
T Consensus 93 ~Ip~~IMtS~~t~e~t~~~f~~ 114 (405)
T 3oc9_A 93 MIHWFLMTNEETIEEINNYFKE 114 (405)
T ss_dssp CCEEEEEECTTTHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHh
Confidence 11 122344556677777776
No 349
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=22.35 E-value=90 Score=25.45 Aligned_cols=31 Identities=13% Similarity=0.152 Sum_probs=20.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|-|.|+|+ + ..+.+++.|+++|+.|+.-+
T Consensus 11 k~~lVTGas~-g-------IG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 11 KTALITGGAR-G-------MGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-h-------HHHHHHHHHHHCCCeEEEEe
Confidence 4566665543 2 24567788888898877544
No 350
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=22.35 E-value=2.3e+02 Score=22.54 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=19.8
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+.
T Consensus 15 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTASTD-G-------IGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESSCSS-H-------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEeC
Confidence 4566665443 1 245677788888888775543
No 351
>3j21_O 50S ribosomal protein L18P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.35 E-value=82 Score=25.94 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhC----CCe---EEEcCCC---ccHHHHHHHHHHhcCCe
Q 027287 37 KDAAIELGKELVAR----NID---LVYGGGS---VGLMGLISQAVYDGGRH 77 (225)
Q Consensus 37 ~~~A~~lG~~LA~~----G~~---lv~GGg~---~GlM~a~a~gA~~aGG~ 77 (225)
.+.|+.+|++||++ |+. +=-||-. .|-..|+++||.++|-.
T Consensus 80 ~~AA~~vG~llA~Ral~kGI~~vvfDrgg~~y~~hgRV~Ala~gAre~GL~ 130 (203)
T 3j21_O 80 TPSAYLLGLLIGYKAKQAGIEEAILDIGLHPPVRGSSVFAVLKGAVDAGLN 130 (203)
T ss_dssp HHHHHHHHHHSSSSTTSSCCCCCEEECCSSCCCTTSHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecCcceeccCcchhhhhhhcccCCee
Confidence 47899999999973 432 2256655 38999999999998864
No 352
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=22.35 E-value=89 Score=25.46 Aligned_cols=19 Identities=16% Similarity=0.261 Sum_probs=11.8
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+.-+
T Consensus 24 G~aia~~l~~~G~~V~~~~ 42 (271)
T 3tzq_B 24 GLETSRVLARAGARVVLAD 42 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEc
Confidence 3456666777777766443
No 353
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=22.28 E-value=88 Score=25.90 Aligned_cols=28 Identities=29% Similarity=0.324 Sum_probs=13.3
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIG 80 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viG 80 (225)
..|||||+. |+=.++++...+.|.+|+.
T Consensus 49 ~vlVTGas~-GIG~aia~~la~~G~~V~~ 76 (291)
T 3ijr_A 49 NVLITGGDS-GIGRAVSIAFAKEGANIAI 76 (291)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEE
Confidence 344555542 5544555544444444443
No 354
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=22.28 E-value=61 Score=28.37 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=24.4
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
++++|+|++|......+.=...|..+.+.|-+.+|.++
T Consensus 9 ~~~~v~vl~GG~S~E~~vS~~sa~~v~~~l~~~~~~v~ 46 (373)
T 3lwb_A 9 RRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVI 46 (373)
T ss_dssp TCEEEEEEEEC-----CHHHHHHHHHHHHSCTTTEEEE
T ss_pred CCcEEEEEecCCCCChhhHHHHHHHHHHHhhhcCceEE
Confidence 34567775554444455556789999999988898876
No 355
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=22.25 E-value=73 Score=26.18 Aligned_cols=30 Identities=17% Similarity=0.232 Sum_probs=25.5
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 5 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 34 (264)
T 3tfo_A 5 KVILITGASG-GIGEGIARELGVAGAKILLG 34 (264)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCcc-HHHHHHHHHHHHCCCEEEEE
Confidence 3578999985 99999999999999888776
No 356
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.21 E-value=1.1e+02 Score=24.34 Aligned_cols=61 Identities=10% Similarity=-0.076 Sum_probs=0.0
Q ss_pred hcccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC-CCccHHHHHHHHHHhcCCeEEEE
Q 027287 13 MNNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG-GSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 13 ~~~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG-g~~GlM~a~a~gA~~aGG~viGI 81 (225)
.....+.++|-|.|+++. ..+.+++.|+++|+.|+... ....--........+.+..+..+
T Consensus 7 ~~~~~~~k~vlITGas~g--------iG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (256)
T 3ezl_A 7 HHMVMSQRIAYVTGGMGG--------IGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS 68 (256)
T ss_dssp ------CEEEEETTTTSH--------HHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCCCEEEEECCCCh--------HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEE
No 357
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=22.19 E-value=91 Score=25.48 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=21.8
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 11 ~k~vlVTGas~g--------IG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 11 DRTYLVTGGGSG--------IGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp TCEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 346777765542 245678888889998875543
No 358
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=22.17 E-value=1.1e+02 Score=23.34 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=10.3
Q ss_pred HHHHHHHHHHhcCCeEEEE
Q 027287 63 LMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 63 lM~a~a~gA~~aGG~viGI 81 (225)
.++.+.+-..+.|..++|-
T Consensus 100 a~~~l~~~l~~~G~~~v~~ 118 (175)
T 1ag9_A 100 ALGTIRDIIEPRGATIVGH 118 (175)
T ss_dssp HHHHHHHHHTTTTCEECCC
T ss_pred HHHHHHHHHHHCCCEEEEE
Confidence 3444444444567777664
No 359
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=22.17 E-value=36 Score=29.33 Aligned_cols=137 Identities=15% Similarity=0.071 Sum_probs=64.9
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEEeCCccccCCCCC-CCCceEeec--C-CHHHHHHHHHhhCCEEEEecCC-
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITG-ETVGEVKPV--A-DMHQRKAEMAKHSDAFIALPGG- 125 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~-~~~~~~~~~--~-~m~~Rk~~mv~~sDa~IvlpGG- 125 (225)
...+|+|+|..|++ +..-|+..|.+|+++-.+... .+... -..+.++.. . ++.++- . ...|++|-.-|+
T Consensus 181 ~~VlV~GaG~vG~~--~~qlak~~Ga~Vi~~~~~~~~-~~~~~~lGa~~v~~~~~~~~~~~~~--~-~~~D~vid~~g~~ 254 (360)
T 1piw_A 181 KKVGIVGLGGIGSM--GTLISKAMGAETYVISRSSRK-REDAMKMGADHYIATLEEGDWGEKY--F-DTFDLIVVCASSL 254 (360)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHTCEEEEEESSSTT-HHHHHHHTCSEEEEGGGTSCHHHHS--C-SCEEEEEECCSCS
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCEEEEEcCCHHH-HHHHHHcCCCEEEcCcCchHHHHHh--h-cCCCEEEECCCCC
Confidence 45778898655654 455566778889888543211 11100 011122211 1 222111 1 346777777776
Q ss_pred -cccHHHHHHHHHH----HHhCCCC------------CcEEEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEcCC-
Q 027287 126 -YGTLEELLEVITW----AQLGIHD------------KPVGLLNVDGY-YNSLLTFIDKAVEEGFISPNARHIIVSAPN- 186 (225)
Q Consensus 126 -~GTL~Ei~~a~~~----~qlg~~~------------kPiill~~~g~-w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d- 186 (225)
..++++.+..+.- ..+|... |-+-+.+...+ .+.+.+ +-+++++|-++... ..+-.++
T Consensus 255 ~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~-~~~l~~~g~l~~~i--~~~~l~~~ 331 (360)
T 1piw_A 255 TDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQ-LLKLVSEKDIKIWV--ETLPVGEA 331 (360)
T ss_dssp TTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHH-HHHHHHHTTCCCCE--EEEESSHH
T ss_pred cHHHHHHHHHHhcCCCEEEEecCCCCccccCHHHHHhCCeEEEEEecCCHHHHHH-HHHHHHhCCCcceE--EEEeccHh
Confidence 4565554433210 0011111 11112221111 123333 33456667776553 4566777
Q ss_pred -HHHHHHHHHh
Q 027287 187 -AKELMNKMEE 196 (225)
Q Consensus 187 -~ee~~~~l~~ 196 (225)
..++++.+++
T Consensus 332 ~~~~A~~~~~~ 342 (360)
T 1piw_A 332 GVHEAFERMEK 342 (360)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHC
Confidence 8888888875
No 360
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=22.13 E-value=1.4e+02 Score=21.31 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=31.3
Q ss_pred CchHHHHHHHHHHHcCCCCccccCcEEEcCCHHHHHHHHHhhcCCccccccccccccccccCCCC
Q 027287 156 YYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMNKMEEYFPQHERVASKLSWENEQFGLNPK 220 (225)
Q Consensus 156 ~w~~l~~~l~~~~~~gfi~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~ 220 (225)
.-.++...+..++.+| .|-+|+++++.+-|- +|.+-.|||+|.
T Consensus 41 iA~dlR~~Vre~l~~G-------------~Sd~eI~~~mv~RYG---------dfVly~Pp~~~~ 83 (90)
T 2kw0_A 41 IATDLRQKVYELMQEG-------------KSKKEIVDYMVARYG---------NFVTYDPPLTPL 83 (90)
T ss_dssp HHHHHHHHHHHHHHHT-------------CCHHHHHHHHHHHHT---------TTCBCSCCSCC-
T ss_pred HHHHHHHHHHHHHHcC-------------CCHHHHHHHHHHhcC---------CeEEeeCCCCch
Confidence 4456777777777776 368899999988665 567777888774
No 361
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=22.08 E-value=1.9e+02 Score=22.89 Aligned_cols=40 Identities=8% Similarity=-0.214 Sum_probs=28.8
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG 57 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G 57 (225)
..+.++|+|+.... .++-+.+....+-+.+.+.|+.++.-
T Consensus 2 s~~~~~Ig~i~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~~ 41 (291)
T 3l49_A 2 SLEGKTIGITAIGT--DHDWDLKAYQAQIAEIERLGGTAIAL 41 (291)
T ss_dssp CCTTCEEEEEESCC--SSHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCcEEEEEeCCC--CChHHHHHHHHHHHHHHHcCCEEEEE
Confidence 35667899987543 35666677777888888889988754
No 362
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=22.07 E-value=93 Score=25.01 Aligned_cols=32 Identities=9% Similarity=0.137 Sum_probs=22.1
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|.|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 8 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 8 KVAVITGSSSG--------IGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CEEEEESCSSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCch--------HHHHHHHHHHHCCCEEEEEcC
Confidence 46777766542 245688888899999876543
No 363
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=22.04 E-value=73 Score=27.79 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=22.7
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
..++++|+|.+|......+.=...|+++.+.|- ||.++.
T Consensus 17 ~~~~~~v~vl~gG~s~E~~vSl~S~~~v~~al~--g~~v~~ 55 (367)
T 2pvp_A 17 RGSHMEFCVLFGGASFEHEISIVSAIALKGVLK--DRIKYF 55 (367)
T ss_dssp ---CCCEEEEEECSSTTHHHHHHHHHHHHHHHG--GGEEEE
T ss_pred cccCCEEEEEECCCCcchhhhHHHHHHHHHHhC--CCeEEE
Confidence 344457888665443333332456788888886 887663
No 364
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=22.03 E-value=3.4e+02 Score=26.46 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 40 AIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.-++..|+..||.++++|.. =-.+.+.+.|.+.+..+||+
T Consensus 613 ~~iVa~~l~~~GfeVi~lG~~-v~~eeiv~aA~e~~adiVgl 653 (727)
T 1req_A 613 QKVIATAYADLGFDVDVGPLF-QTPEETARQAVEADVHVVGV 653 (727)
T ss_dssp HHHHHHHHHHHTCEEEECCTT-BCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCeEEEeCCCC-CCHHHHHHHHHHcCCCEEEE
Confidence 455677888899999998875 45688889999999999999
No 365
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=22.03 E-value=69 Score=26.55 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=21.6
Q ss_pred hCCEEEEecCCcccHHHHHHHHHHHHhCCCCCcEEEEeC
Q 027287 115 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 153 (225)
Q Consensus 115 ~sDa~IvlpGG~GTL~Ei~~a~~~~qlg~~~kPiill~~ 153 (225)
.+|.+|+ -||=||+.+++..+ .. ++|++-+|.
T Consensus 41 ~~D~vv~-~GGDGTll~~a~~~-----~~-~~PilGIn~ 72 (258)
T 1yt5_A 41 TADLIVV-VGGDGTVLKAAKKA-----AD-GTPMVGFKA 72 (258)
T ss_dssp CCSEEEE-EECHHHHHHHHTTB-----CT-TCEEEEEES
T ss_pred CCCEEEE-EeCcHHHHHHHHHh-----CC-CCCEEEEEC
Confidence 4576655 57899999987444 22 788766664
No 366
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=21.98 E-value=77 Score=25.10 Aligned_cols=20 Identities=15% Similarity=0.190 Sum_probs=13.1
Q ss_pred HHHHHHHHHhCCCeEEEcCC
Q 027287 40 AIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg 59 (225)
.+.+++.|+++|+.|+.-+-
T Consensus 27 G~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 27 GAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEec
Confidence 34567777777887765543
No 367
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=21.96 E-value=85 Score=25.23 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=12.3
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+..+
T Consensus 15 G~~ia~~l~~~G~~V~~~~ 33 (258)
T 3a28_C 15 GRGISEKLAADGFDIAVAD 33 (258)
T ss_dssp HHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3456667777788776544
No 368
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=21.91 E-value=92 Score=25.55 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=19.6
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|.|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 30 k~vlVTGas~g--------IG~aia~~L~~~G~~V~~~~r 61 (276)
T 2b4q_A 30 RIALVTGGSRG--------IGQMIAQGLLEAGARVFICAR 61 (276)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEeCCCCh--------HHHHHHHHHHHCCCEEEEEeC
Confidence 45666654431 235677777788888775543
No 369
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=21.89 E-value=94 Score=24.98 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=21.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 13 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTGGSKG--------IGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCh--------HHHHHHHHHHHCCCEEEEEeC
Confidence 46777765542 245677788888998875543
No 370
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.89 E-value=94 Score=24.96 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=20.8
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.++|.|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 19 ~k~vlVTGas~g--------IG~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 19 DKGVLVLAASRG--------IGRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp TCEEEEESCSSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEcC
Confidence 346667765442 245677778888888775543
No 371
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=21.88 E-value=3.1e+02 Score=21.97 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=25.6
Q ss_pred CCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 50 RNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 50 ~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
....|||||+. |+=.++++...+.|-+|+.+
T Consensus 28 ~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 58 (260)
T 3un1_A 28 QKVVVITGASQ-GIGAGLVRAYRDRNYRVVAT 58 (260)
T ss_dssp CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 34678899874 88889999988899888877
No 372
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=21.87 E-value=92 Score=26.67 Aligned_cols=32 Identities=22% Similarity=0.148 Sum_probs=21.7
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhc-CCeEEEEeCC
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDG-GRHVIGVIPK 84 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~a-GG~viGIiP~ 84 (225)
...+|+|+|..|++ +..-|+.. |.+|+++-++
T Consensus 188 ~~VlV~GaG~vG~~--avqlak~~~Ga~Vi~~~~~ 220 (359)
T 1h2b_A 188 AYVAIVGVGGLGHI--AVQLLKVMTPATVIALDVK 220 (359)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHCCCEEEEEESS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEeCC
Confidence 45778898755554 44556667 8888888543
No 373
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=21.86 E-value=95 Score=24.97 Aligned_cols=30 Identities=27% Similarity=0.241 Sum_probs=25.2
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 10 k~vlVTGas~-giG~~ia~~l~~~G~~V~~~ 39 (260)
T 2ae2_A 10 CTALVTGGSR-GIGYGIVEELASLGASVYTC 39 (260)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3578999984 99999999988889888776
No 374
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=21.80 E-value=95 Score=25.03 Aligned_cols=31 Identities=6% Similarity=0.057 Sum_probs=20.8
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|.|.|+|+. ..+.+++.|+++|+.|+.-+
T Consensus 8 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 8 KVALVTGAAQG--------IGRAFAEALLLKGAKVALVD 38 (267)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCc--------HHHHHHHHHHHCCCEEEEEE
Confidence 46777765542 24567788888899877544
No 375
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=21.78 E-value=78 Score=26.40 Aligned_cols=31 Identities=10% Similarity=-0.080 Sum_probs=20.9
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
+.++|.|.|++.. ....|.+.|.++|+.|+.
T Consensus 24 ~~~~vlVtGatG~--------iG~~l~~~L~~~g~~V~~ 54 (351)
T 3ruf_A 24 SPKTWLITGVAGF--------IGSNLLEKLLKLNQVVIG 54 (351)
T ss_dssp SCCEEEEETTTSH--------HHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCcH--------HHHHHHHHHHHCCCEEEE
Confidence 4568888876553 245677777778887664
No 376
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=21.72 E-value=76 Score=25.57 Aligned_cols=19 Identities=5% Similarity=0.202 Sum_probs=13.3
Q ss_pred HHHHHHHHhCCCeEEEcCC
Q 027287 41 IELGKELVARNIDLVYGGG 59 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~GGg 59 (225)
+.+++.|+++|+.|+..+-
T Consensus 14 ~aia~~l~~~G~~V~~~~r 32 (248)
T 3asu_A 14 ECITRRFIQQGHKVIATGR 32 (248)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 4567777888888775543
No 377
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=21.69 E-value=29 Score=27.17 Aligned_cols=33 Identities=15% Similarity=0.011 Sum_probs=20.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
++++|.|+.+|..++ =.+.|+.+++.|.+.++.
T Consensus 5 ~~~kiliiy~S~~Gn---T~~lA~~ia~~l~~~~~~ 37 (193)
T 3d7n_A 5 SSSNTVVVYHSGYGH---THRMAEAVAEGAEATLHA 37 (193)
T ss_dssp -CCCEEEEECCSSSH---HHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEEEECCChH---HHHHHHHHHHHhhhcceE
Confidence 456777777777653 235677777777654433
No 378
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=21.63 E-value=46 Score=28.85 Aligned_cols=31 Identities=16% Similarity=0.546 Sum_probs=22.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
++|.|+||+...-.+ +.-+||.|+..|+.+.
T Consensus 133 ~~vlVlcG~GNNGGD-----Glv~AR~L~~~G~~V~ 163 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ-----GISCGRHLANHDVQVI 163 (306)
T ss_dssp CEEEEEECSSHHHHH-----HHHHHHHHHHTTCEEE
T ss_pred CeEEEEECCCCCHHH-----HHHHHHHHHHCCCcEE
Confidence 589999996542123 3468889999999863
No 379
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=21.62 E-value=1.1e+02 Score=26.44 Aligned_cols=38 Identities=11% Similarity=0.104 Sum_probs=25.6
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
.++++.|+|++ ...+.... ..|..||..||++|..++.
T Consensus 140 ~~~~kvIav~s-~KGGvGKT--T~a~nLA~~La~~g~rVll 177 (373)
T 3fkq_A 140 NDKSSVVIFTS-PCGGVGTS--TVAAACAIAHANMGKKVFY 177 (373)
T ss_dssp TTSCEEEEEEC-SSTTSSHH--HHHHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEC-CCCCChHH--HHHHHHHHHHHhCCCCEEE
Confidence 34567788884 44454443 4678899999998866553
No 380
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.58 E-value=97 Score=24.64 Aligned_cols=31 Identities=10% Similarity=-0.012 Sum_probs=19.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|.|.|+++. ..+.+++.|+++|+.|+..+
T Consensus 8 k~vlITGasgg--------iG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 8 ALALVTGAGSG--------IGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCh--------HHHHHHHHHHHCCCEEEEEe
Confidence 45666655431 24567777777888877554
No 381
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=21.57 E-value=3.7e+02 Score=22.72 Aligned_cols=83 Identities=20% Similarity=0.166 Sum_probs=40.9
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCC-CCCceEeec----CCHHHHHHHHH-hhCCEEEEec
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITG-ETVGEVKPV----ADMHQRKAEMA-KHSDAFIALP 123 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~-~~~~~~~~~----~~m~~Rk~~mv-~~sDa~Ivlp 123 (225)
...+|+|+|..|++ +..-|+..|. +|+++-.+... .+... -..+..+.. .++.++-..+. ...|++|-..
T Consensus 192 ~~VlV~GaG~vG~~--avqla~~~Ga~~Vi~~~~~~~~-~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 192 SVCAVFGLGGVGLA--VIMGCKVAGASRIIGVDINKDK-FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHTCSEEEEECSCGGG-HHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHHH-HHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECC
Confidence 45777887654544 4555667787 78888433211 11100 011222221 23433222221 1368888777
Q ss_pred CCcccHHHHHHHH
Q 027287 124 GGYGTLEELLEVI 136 (225)
Q Consensus 124 GG~GTL~Ei~~a~ 136 (225)
|+.-++++....+
T Consensus 269 g~~~~~~~~~~~l 281 (373)
T 2fzw_A 269 GNVKVMRAALEAC 281 (373)
T ss_dssp CCHHHHHHHHHTB
T ss_pred CcHHHHHHHHHhh
Confidence 7766666655444
No 382
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=21.55 E-value=79 Score=25.70 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=25.5
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 12 k~vlVTGas~-GIG~aia~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGIK-NLGALTAKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCSS-HHHHHHHHHHTTSSCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 4678999985 99999999988899888776
No 383
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.51 E-value=96 Score=25.26 Aligned_cols=19 Identities=11% Similarity=0.230 Sum_probs=12.5
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+.-+
T Consensus 34 G~~ia~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 34 GFGIAQGLAEAGCSVVVAS 52 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4566777777788766543
No 384
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=21.48 E-value=95 Score=25.51 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=25.7
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
-..|||||+. |+=.++++...+.|.+|+.+
T Consensus 33 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGAST-GIGKKVALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4678999985 99999999999999888776
No 385
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=21.45 E-value=2e+02 Score=22.82 Aligned_cols=60 Identities=8% Similarity=-0.150 Sum_probs=0.0
Q ss_pred hcccCCcceEEEEeCC--CCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 13 MNNQSKFNRICVFCGS--SAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 13 ~~~~~~~~~V~Vfggs--~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.....+.++|-|.|++ +. ..+.+++.|+++|+.|+.-+-. .--....+...+..+.+..+
T Consensus 8 ~~~~~~~k~vlITGa~~~~g--------iG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~ 69 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRS--------IAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEFGSELVF 69 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTS--------HHHHHHHHHHHTTCEEEEEESS-GGGHHHHHHHHHHTTCCCEE
T ss_pred CccccCCCEEEEeCCCCCCc--------HHHHHHHHHHHcCCCEEEEecc-hhhHHHHHHHHHHcCCcEEE
No 386
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=21.41 E-value=96 Score=25.31 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=21.7
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.++|.|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 9 ~k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 9 GKVVVVTGGGRG--------IGAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp TCEEEEETCSSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 356777765542 345677888889998775543
No 387
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=21.40 E-value=1e+02 Score=25.38 Aligned_cols=32 Identities=9% Similarity=0.207 Sum_probs=19.2
Q ss_pred hCCCeEE-EcCCCccHHH-HHHHHHHhcCCeEEEE
Q 027287 49 ARNIDLV-YGGGSVGLMG-LISQAVYDGGRHVIGV 81 (225)
Q Consensus 49 ~~G~~lv-~GGg~~GlM~-a~a~gA~~aGG~viGI 81 (225)
+.|-.|+ .|+|+ |..- ++++.....|.+++||
T Consensus 69 ~~~~~vLDlGcGt-G~~~~~la~~~~~~~~~v~gv 102 (261)
T 4gek_A 69 QPGTQVYDLGCSL-GAATLSVRRNIHHDNCKIIAI 102 (261)
T ss_dssp CTTCEEEEETCTT-THHHHHHHHTCCSSSCEEEEE
T ss_pred CCCCEEEEEeCCC-CHHHHHHHHhcCCCCCEEEEE
Confidence 3565555 88886 7553 3333222346689999
No 388
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.37 E-value=98 Score=24.86 Aligned_cols=31 Identities=6% Similarity=0.090 Sum_probs=19.2
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|.|.|+++. ..+.+++.|+++|+.|+.-+
T Consensus 7 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~ 37 (256)
T 2d1y_A 7 KGVLVTGGARG--------IGRAIAQAFAREGALVALCD 37 (256)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCH--------HHHHHHHHHHHCCCEEEEEe
Confidence 45666655432 23567777788888876544
No 389
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=21.36 E-value=1e+02 Score=24.41 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=22.9
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
.++|.|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 11 ~k~vlITGasgg--------iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 11 GACAAVTGAGSG--------IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp TCEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 357777766542 245788888899999876554
No 390
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=21.36 E-value=96 Score=25.46 Aligned_cols=34 Identities=12% Similarity=0.139 Sum_probs=23.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
+.++|.|.|+++. ..+.+++.|+++|+.|+..+-
T Consensus 15 ~gk~vlVTGas~g--------IG~~~a~~L~~~G~~V~~~~r 48 (291)
T 3rd5_A 15 AQRTVVITGANSG--------LGAVTARELARRGATVIMAVR 48 (291)
T ss_dssp TTCEEEEECCSSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh--------HHHHHHHHHHHCCCEEEEEEC
Confidence 4456777765542 345678888889999876554
No 391
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=21.28 E-value=72 Score=25.51 Aligned_cols=30 Identities=10% Similarity=-0.124 Sum_probs=18.6
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEc
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYG 57 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~G 57 (225)
++|-|.|+|+ +. .+.+++.|+++|+.|+.-
T Consensus 2 k~vlVTGas~-gI-------G~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 2 VIALVTHARH-FA-------GPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp CEEEESSTTS-TT-------HHHHHHHHHHTTCEEEEC
T ss_pred CEEEEECCCC-hH-------HHHHHHHHHHCCCEEEEe
Confidence 3555665544 21 245677778889987754
No 392
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=21.27 E-value=72 Score=22.71 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=17.0
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE
Q 027287 22 ICVFCGSSAGKKSTYKDAAIELGKELVARNIDL 54 (225)
Q Consensus 22 V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 54 (225)
|.|+.+|..++. .+.|+++++.|.+.|+.+
T Consensus 2 i~iiy~S~tGnT---~~~a~~i~~~l~~~g~~v 31 (137)
T 2fz5_A 2 VEIVYWSGTGNT---EAMANEIEAAVKAAGADV 31 (137)
T ss_dssp EEEEECCSSSHH---HHHHHHHHHHHHHTTCCE
T ss_pred EEEEEECCCChH---HHHHHHHHHHHHhCCCeE
Confidence 344445665542 245677777776666543
No 393
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=21.27 E-value=3.8e+02 Score=22.71 Aligned_cols=83 Identities=20% Similarity=0.183 Sum_probs=41.0
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCC-eEEEEeCCccccCCCCC-CCCceEeec----CCHHHHHHHHH-hhCCEEEEec
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGR-HVIGVIPKTLMPREITG-ETVGEVKPV----ADMHQRKAEMA-KHSDAFIALP 123 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG-~viGIiP~~~~~~e~~~-~~~~~~~~~----~~m~~Rk~~mv-~~sDa~Ivlp 123 (225)
...+|+|+|..|++ +..-|+..|. +|+++-.+... .+... -..+.++.. .++.+.-..+. ...|++|-..
T Consensus 194 ~~VlV~GaG~vG~~--a~qla~~~Ga~~Vi~~~~~~~~-~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 194 STCAVFGLGAVGLA--AVMGCHSAGAKRIIAVDLNPDK-FEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCGGG-HHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEEcCCHHH-HHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECC
Confidence 45678887654544 4556777787 78888433211 11110 011222221 23433222222 2468888877
Q ss_pred CCcccHHHHHHHH
Q 027287 124 GGYGTLEELLEVI 136 (225)
Q Consensus 124 GG~GTL~Ei~~a~ 136 (225)
|+.-++++.+..+
T Consensus 271 g~~~~~~~~~~~l 283 (374)
T 1cdo_A 271 GNVGVMRNALESC 283 (374)
T ss_dssp CCHHHHHHHHHTB
T ss_pred CCHHHHHHHHHHh
Confidence 7755666555443
No 394
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=21.23 E-value=1.5e+02 Score=23.85 Aligned_cols=43 Identities=14% Similarity=0.072 Sum_probs=30.5
Q ss_pred cCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 16 QSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 16 ~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
.++.++|+|+..+....++-|.+....+-+.+.+.|+.++.--
T Consensus 5 ~~~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 47 (288)
T 3gv0_A 5 TGKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTP 47 (288)
T ss_dssp --CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECC
T ss_pred cCCCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4567789999765442236777777788888888999988654
No 395
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=21.23 E-value=95 Score=25.01 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=23.8
Q ss_pred ccCCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 15 NQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 15 ~~~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
+.++++.|+|+ +...+.... -.|..||..|| +|..++
T Consensus 23 ~~~~~~vI~v~-s~kGGvGKT--T~a~~LA~~la-~g~~Vl 59 (267)
T 3k9g_A 23 DNKKPKIITIA-SIKGGVGKS--TSAIILATLLS-KNNKVL 59 (267)
T ss_dssp ---CCEEEEEC-CSSSSSCHH--HHHHHHHHHHT-TTSCEE
T ss_pred CCCCCeEEEEE-eCCCCchHH--HHHHHHHHHHH-CCCCEE
Confidence 34556667776 455555554 46789999999 887765
No 396
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=21.22 E-value=81 Score=25.15 Aligned_cols=17 Identities=0% Similarity=-0.019 Sum_probs=10.1
Q ss_pred HHHHHHHHhCCCeEEEc
Q 027287 41 IELGKELVARNIDLVYG 57 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~G 57 (225)
+.+++.|+++|+.|+.-
T Consensus 20 ~~ia~~l~~~G~~V~~~ 36 (246)
T 2ag5_A 20 QAAALAFAREGAKVIAT 36 (246)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 45556666667666543
No 397
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=21.20 E-value=2.1e+02 Score=22.81 Aligned_cols=19 Identities=11% Similarity=0.148 Sum_probs=13.7
Q ss_pred HHHHHHHHHhCCCeEEEcC
Q 027287 40 AIELGKELVARNIDLVYGG 58 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GG 58 (225)
.+.+++.|+++|+.|+..+
T Consensus 18 G~~ia~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 18 GRGIALQLCKAGATVYITG 36 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567778888898877544
No 398
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=21.17 E-value=84 Score=25.93 Aligned_cols=18 Identities=6% Similarity=0.294 Sum_probs=10.8
Q ss_pred HHHHHHHHhCCCeEEEcC
Q 027287 41 IELGKELVARNIDLVYGG 58 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~GG 58 (225)
+.+++.|+++|+.|+.-+
T Consensus 43 ~aia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 43 LAVARRLADEGCHVLCAD 60 (277)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 355666666677666443
No 399
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=21.13 E-value=1e+02 Score=24.83 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=21.5
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 8 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 8 KLAVVTAGSSG--------LGFASALELARNGARLLLFSR 39 (260)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCch--------HHHHHHHHHHHCCCEEEEEeC
Confidence 46777765542 245678888889999875543
No 400
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=21.07 E-value=1.7e+02 Score=25.25 Aligned_cols=33 Identities=9% Similarity=0.139 Sum_probs=21.8
Q ss_pred HHHHHHcCCCC--cc-ccCcEEEcCCHHHHHHHHHh
Q 027287 164 IDKAVEEGFIS--PN-ARHIIVSAPNAKELMNKMEE 196 (225)
Q Consensus 164 l~~~~~~gfi~--~~-~~~~i~~~~d~ee~~~~l~~ 196 (225)
+-.++.+|-++ .. .....+-.++..++++.+.+
T Consensus 346 ~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~ 381 (398)
T 2dph_A 346 LTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDK 381 (398)
T ss_dssp HHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHT
T ss_pred HHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhc
Confidence 34466777776 43 23456677888888888865
No 401
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=21.05 E-value=1e+02 Score=24.52 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=25.5
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 10 k~vlITGas~-giG~~~a~~l~~~G~~V~~~ 39 (253)
T 3qiv_A 10 KVGIVTGSGG-GIGQAYAEALAREGAAVVVA 39 (253)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 4678999984 99999999999999888776
No 402
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=21.04 E-value=1.1e+02 Score=24.53 Aligned_cols=20 Identities=10% Similarity=0.199 Sum_probs=12.9
Q ss_pred HHHHHHHHHhCCCeEEEcCC
Q 027287 40 AIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg 59 (225)
.+.+++.|+++|+.|+.-+-
T Consensus 19 G~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 19 GKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 35567777777877765443
No 403
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=21.02 E-value=69 Score=25.41 Aligned_cols=30 Identities=27% Similarity=0.303 Sum_probs=23.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+ .|+=.++++...+.|-+|+.+
T Consensus 12 k~vlITGas-ggiG~~la~~l~~~G~~V~~~ 41 (254)
T 2wsb_A 12 ACAAVTGAG-SGIGLEICRAFAASGARLILI 41 (254)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEE
Confidence 467888887 488888888888888887776
No 404
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=21.00 E-value=1e+02 Score=24.64 Aligned_cols=32 Identities=9% Similarity=0.020 Sum_probs=19.6
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 10 k~vlITGas~g--------IG~~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAGSG--------FGEGMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCch--------HHHHHHHHHHHCCCEEEEEcC
Confidence 45666654431 235677777788888775543
No 405
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.97 E-value=1e+02 Score=25.14 Aligned_cols=31 Identities=16% Similarity=0.003 Sum_probs=18.7
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|.|.|+|+. ..+.+++.|+++|+.|+.-+
T Consensus 7 k~vlITGas~g--------IG~aia~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAASG--------IGRAALDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEe
Confidence 45666655431 23456777777888876544
No 406
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=20.96 E-value=82 Score=25.36 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=25.1
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 6 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 35 (260)
T 2qq5_A 6 QVCVVTGASR-GIGRGIALQLCKAGATVYIT 35 (260)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3578999984 99999999998999888766
No 407
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=20.95 E-value=3.6e+02 Score=22.51 Aligned_cols=77 Identities=19% Similarity=0.314 Sum_probs=44.7
Q ss_pred HHHHHHHhhCCEEEEec--CCcccHHHHHHHHHHHHhCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCC---Cc------
Q 027287 107 QRKAEMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFI---SP------ 175 (225)
Q Consensus 107 ~Rk~~mv~~sDa~Ivlp--GG~GTL~Ei~~a~~~~qlg~~~kPiill~~~g~w~~l~~~l~~~~~~gfi---~~------ 175 (225)
+....+...||++|.-. -|+|. =+.|++ ..++|||..+..| ..+ ++.++.. +.
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~--~~lEAm------a~G~PvI~s~~~g----~~e----~v~~~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGL--CSAEGA------VLGKPLIISAVGG----ADD----YFSGDCVYKIKPSAWISV 328 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCH--HHHHHH------TTTCCEEEECCHH----HHH----HSCTTTSEEECCCEEEEC
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCc--HHHHHH------HcCCCEEEcCCCC----hHH----HHccCccccccccccccc
Confidence 44555778999888743 23342 245555 3689999977542 222 2222210 00
Q ss_pred -cccCc--EEEcCCHHHHHHHHHhhcCC
Q 027287 176 -NARHI--IVSAPNAKELMNKMEEYFPQ 200 (225)
Q Consensus 176 -~~~~~--i~~~~d~ee~~~~l~~~~~~ 200 (225)
..... ++-..|++++.+.| +....
T Consensus 329 ~~~~G~~gl~~~~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 329 DDRDGIGGIEGIIDVDDLVEAF-TFFKD 355 (413)
T ss_dssp TTTCSSCCEEEECCHHHHHHHH-HHTTS
T ss_pred ccccCcceeeCCCCHHHHHHHH-HHhcC
Confidence 00144 77778999999999 87653
No 408
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=20.93 E-value=1.5e+02 Score=23.04 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=21.8
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDL 54 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 54 (225)
++++|.|+.+|..++ -.+.|+.+.+.|.+.|+.+
T Consensus 5 ~mmkilii~~S~~g~---T~~la~~i~~~l~~~g~~v 38 (211)
T 1ydg_A 5 APVKLAIVFYSSTGT---GYAMAQEAAEAGRAAGAEV 38 (211)
T ss_dssp CCCEEEEEECCSSSH---HHHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEEEECCCCh---HHHHHHHHHHHHhcCCCEE
Confidence 345677766776542 2356788888887777643
No 409
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=20.92 E-value=77 Score=25.68 Aligned_cols=20 Identities=10% Similarity=0.046 Sum_probs=13.8
Q ss_pred HHHHHHHHHhCCCeEEEcCC
Q 027287 40 AIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg 59 (225)
.+.+++.|+++|+.|+..+-
T Consensus 24 G~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 24 GHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 45677777888888775543
No 410
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=20.89 E-value=71 Score=30.23 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=21.5
Q ss_pred eEEE-EeCCCCCCChHHHHHHHHHHHHHHhCCC--eEEEcC
Q 027287 21 RICV-FCGSSAGKKSTYKDAAIELGKELVARNI--DLVYGG 58 (225)
Q Consensus 21 ~V~V-fggs~~~~~~~~~~~A~~lG~~LA~~G~--~lv~GG 58 (225)
.|.+ ||||+..+.+...+.|+.+.+.. +.|+ .||.||
T Consensus 3 ~iViK~GGssl~~~~~i~~va~~i~~~~-~~g~~vvvV~sa 42 (600)
T 3l76_A 3 LIVQKFGGTSVGTVERIQAVAQRIKRTV-QGGNSLVVVVSA 42 (600)
T ss_dssp EEEEEECSGGGSSHHHHHHHHHHHHHHH-HTTCEEEEEECC
T ss_pred eEEEEeCCCCcCCHHHHHHHHHHHHHHH-HCCCcEEEEECC
Confidence 4444 99998875444544555544433 3455 456777
No 411
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=20.89 E-value=1e+02 Score=24.11 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=24.5
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.++++...+.|-.|+.+
T Consensus 4 ~vlITGas~-gIG~~ia~~l~~~G~~V~~~ 32 (235)
T 3l77_A 4 VAVITGASR-GIGEAIARALARDGYALALG 32 (235)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 468999984 99999999999999888776
No 412
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=20.87 E-value=3.5e+02 Score=22.14 Aligned_cols=106 Identities=11% Similarity=0.064 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCC--ccHHHHHHHHHHhcCCeEEEEeCCccccCCCCCCC
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGS--VGLMGLISQAVYDGGRHVIGVIPKTLMPREITGET 95 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~--~GlM~a~a~gA~~aGG~viGIiP~~~~~~e~~~~~ 95 (225)
+.++|-|.|+++ -..+.+++.|+++|+.|+.-+.. ..--+.+.+...+.|+.+..+ .-.
T Consensus 48 ~~k~vlVTGas~--------GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~D 108 (294)
T 3r3s_A 48 KDRKALVTGGDS--------GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL-----------PGD 108 (294)
T ss_dssp TTCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEEC-----------CCC
T ss_pred CCCEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEE-----------Eec
Q ss_pred CceEeecCCHHHHHHHHHhhCCEEEEecCCcc--------cHHHHHHHHHHHHhC
Q 027287 96 VGEVKPVADMHQRKAEMAKHSDAFIALPGGYG--------TLEELLEVITWAQLG 142 (225)
Q Consensus 96 ~~~~~~~~~m~~Rk~~mv~~sDa~IvlpGG~G--------TL~Ei~~a~~~~qlg 142 (225)
+++.-....+.++-.--...-|++|-..|..+ |.+++-..+..+-.+
T Consensus 109 v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g 163 (294)
T 3r3s_A 109 LSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163 (294)
T ss_dssp TTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHH
No 413
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=20.85 E-value=3e+02 Score=22.36 Aligned_cols=71 Identities=13% Similarity=0.046 Sum_probs=42.7
Q ss_pred HHHHHHHHhhCCEEEEecCCcccHHHHHHHHHHHHh-CCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEc
Q 027287 106 HQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQL-GIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSA 184 (225)
Q Consensus 106 ~~Rk~~mv~~sDa~IvlpGG~GTL~Ei~~a~~~~ql-g~~~kPiill~~~g~w~~l~~~l~~~~~~gfi~~~~~~~i~~~ 184 (225)
.+|-...++.+|.+|+++-+.=+.- . +.+.+. ...+.|++++|.+.-. . +....+.+.
T Consensus 158 ~~~a~~~~~~adl~lviGTSl~V~P-a---~~l~~~a~~~g~~~i~iN~~~t~--~---------------~~~~~~~i~ 216 (235)
T 1s5p_A 158 MDEIYMALSMADIFIAIGTSGHVYP-A---AGFVHEAKLHGAHTVELNLEPSQ--V---------------GNEFAEKYY 216 (235)
T ss_dssp HHHHHHHHHHCSEEEEESCCTTEET-G---GGHHHHHHHTTCEEEEEESSSCC--------------------CCSEEEE
T ss_pred HHHHHHHHhcCCEEEEECcCCchhh-H---HHHHHHHHHcCCeEEEEECCCCC--C---------------CccccEEEe
Confidence 4666677889999999976543311 0 111111 1246899999975321 0 112236788
Q ss_pred CCHHHHHHHHHhh
Q 027287 185 PNAKELMNKMEEY 197 (225)
Q Consensus 185 ~d~ee~~~~l~~~ 197 (225)
.+.++++..|.+.
T Consensus 217 ~~~~~~l~~l~~~ 229 (235)
T 1s5p_A 217 GPASQVVPEFVEK 229 (235)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8999999888654
No 414
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=20.83 E-value=2.9e+02 Score=22.14 Aligned_cols=42 Identities=12% Similarity=0.087 Sum_probs=25.7
Q ss_pred HHHHHHHHHhCCCeEEEc-CCCccHHHHHHHHHHhcCCeEEEE
Q 027287 40 AIELGKELVARNIDLVYG-GGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~G-Gg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.+.+++.|+++|+.|+.. ......-+.+.+...+.|+++..+
T Consensus 31 G~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (270)
T 3is3_A 31 GAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI 73 (270)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 456788888899988753 322233444444445556666665
No 415
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=20.81 E-value=1.6e+02 Score=24.10 Aligned_cols=36 Identities=6% Similarity=-0.038 Sum_probs=23.6
Q ss_pred ceEEEEeCC-----------CCC-CChHHHHHHHHHHHHHHhCCCeEE
Q 027287 20 NRICVFCGS-----------SAG-KKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 20 ~~V~Vfggs-----------~~~-~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
++|++++.+ -.. ..--....+.++++.|+++||.+.
T Consensus 4 mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~ 51 (342)
T 2iuy_A 4 LKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVF 51 (342)
T ss_dssp CEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEE
T ss_pred cEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEE
Confidence 578888765 011 111234567889999999988765
No 416
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=20.80 E-value=2.8e+02 Score=21.95 Aligned_cols=32 Identities=9% Similarity=0.024 Sum_probs=20.3
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|-|.|+++. ..+.+++.|+++|+.|+.-+-
T Consensus 3 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 3 KVALVTGAGQG--------IGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh--------HHHHHHHHHHHCCCEEEEEeC
Confidence 35666655431 245677888888998775543
No 417
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=20.75 E-value=77 Score=26.00 Aligned_cols=42 Identities=17% Similarity=0.070 Sum_probs=21.6
Q ss_pred HHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 40 AIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.+.+++.|+++|+.|+.-+-...--+.+.+...+.|+.+..+
T Consensus 41 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 82 (270)
T 3ftp_A 41 GRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGA 82 (270)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 356677777788877654433222222333333445555554
No 418
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=20.75 E-value=1.1e+02 Score=25.78 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=25.8
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-.|+.+
T Consensus 9 k~vlVTGas~-gIG~~la~~l~~~G~~Vv~~ 38 (319)
T 3ioy_A 9 RTAFVTGGAN-GVGIGLVRQLLNQGCKVAIA 38 (319)
T ss_dssp CEEEEETTTS-THHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEcCCch-HHHHHHHHHHHHCCCEEEEE
Confidence 3678999984 99999999999999888876
No 419
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=20.74 E-value=2.2e+02 Score=25.43 Aligned_cols=52 Identities=4% Similarity=0.055 Sum_probs=29.2
Q ss_pred CCCccccCcEEEcCCHHHHHHHHHhh-------------------cCCccccccccccccccccCCCCCCC
Q 027287 172 FISPNARHIIVSAPNAKELMNKMEEY-------------------FPQHERVASKLSWENEQFGLNPKCDI 223 (225)
Q Consensus 172 fi~~~~~~~i~~~~d~ee~~~~l~~~-------------------~~~~~~~~~~~~w~~~~~~~~~~~~~ 223 (225)
.++++....+.=+.+|+++++.+..= .+.......+.+|..+--|+.|.|+-
T Consensus 243 ~LP~~kPRyLmGvG~P~~il~~V~~GvDmFDcv~Ptr~Ar~G~~lt~~G~i~l~~~~y~~D~~Pld~~C~C 313 (381)
T 2ash_A 243 FLPEDKPRYFMGGGSPELILELVDRGVDMFDSVFPTRIARHGTALTWNGKLNLKASYNKRSLEPVDERCGC 313 (381)
T ss_dssp TSCTTSCEEECSCCCHHHHHHHHTTTCCEEEESHHHHHHHTTEEEETTEEEETTSGGGTTCCSCSCTTCCS
T ss_pred hCCCCCcEEEcCCCCHHHHHHHHHcCCCEEeCChhhhhhcCceEeccCCceEecchhhccCCCCCCCCCCC
Confidence 45555555555556666666655431 11111122345677888899999973
No 420
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=20.64 E-value=1e+02 Score=25.20 Aligned_cols=54 Identities=11% Similarity=0.105 Sum_probs=29.3
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
++|.|.|+++. ..+.+++.|+++|+.|+.-+-...-.+.+.+...+.|+.+..+
T Consensus 23 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 76 (277)
T 2rhc_B 23 EVALVTGATSG--------IGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR 76 (277)
T ss_dssp CEEEEETCSSH--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 46666765442 2456778888899988755433121222223233346665554
No 421
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=20.62 E-value=1.3e+02 Score=20.64 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=21.3
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
.+-+.|.|||.+.. .|...+..|.+.||.+..
T Consensus 54 ~~~~~iv~yC~~g~--------rs~~a~~~L~~~G~~v~~ 85 (103)
T 3eme_A 54 NKNEIYYIVCAGGV--------RSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp CTTSEEEEECSSSS--------HHHHHHHHHHTTTCEEEE
T ss_pred CCCCeEEEECCCCh--------HHHHHHHHHHHCCCCeEE
Confidence 34567999996542 245667778888986553
No 422
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.60 E-value=88 Score=24.70 Aligned_cols=29 Identities=28% Similarity=0.416 Sum_probs=20.4
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 5 ~vlITGas~-gIG~~~a~~l~~~G~~V~~~ 33 (236)
T 1ooe_A 5 KVIVYGGKG-ALGSAILEFFKKNGYTVLNI 33 (236)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 457777764 77777777777777666665
No 423
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=20.58 E-value=1.2e+02 Score=24.34 Aligned_cols=31 Identities=16% Similarity=0.144 Sum_probs=25.3
Q ss_pred CCeEEEcCCC-ccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGS-VGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~-~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. .|+=.++++...+.|-+|+.+
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEe
Confidence 3578999872 279999999999999988776
No 424
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=20.57 E-value=1.6e+02 Score=23.76 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=26.3
Q ss_pred CCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 50 RNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 50 ~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
....|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 ~k~vlITGas~-GIG~~~a~~L~~~G~~V~~~ 42 (311)
T 3o26_A 12 RRCAVVTGGNK-GIGFEICKQLSSNGIMVVLT 42 (311)
T ss_dssp CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEecCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 45788999984 99999999988999888877
No 425
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=20.56 E-value=1e+02 Score=24.63 Aligned_cols=29 Identities=28% Similarity=0.355 Sum_probs=24.6
Q ss_pred CeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 52 IDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 52 ~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 32 (256)
T 1geg_A 4 VALVTGAGQ-GIGKAIALRLVKDGFAVAIA 32 (256)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 468999984 99999999998999888776
No 426
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=20.50 E-value=41 Score=24.43 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=15.6
Q ss_pred CCCCcEEEEeCCCCc-hHHHHHHHH-HHHcCC
Q 027287 143 IHDKPVGLLNVDGYY-NSLLTFIDK-AVEEGF 172 (225)
Q Consensus 143 ~~~kPiill~~~g~w-~~l~~~l~~-~~~~gf 172 (225)
..+||++++.+.|.. ......+++ +.+.|+
T Consensus 77 l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~ 108 (138)
T 5nul_A 77 ISGKKVALFGSYGWGDGKWMRDFEERMNGYGC 108 (138)
T ss_dssp CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEEEecCCCCChHHHHHHHHHHHCCC
Confidence 457888887654432 333444443 334454
No 427
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=20.41 E-value=1.5e+02 Score=24.01 Aligned_cols=37 Identities=14% Similarity=0.198 Sum_probs=27.0
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEE
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVY 56 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~ 56 (225)
++|+.|-|.+ +..+....+ .+..|.+.|+++|+.+.+
T Consensus 2 ~~mk~i~Itg-t~t~vGKT~--vt~~L~~~l~~~G~~V~~ 38 (228)
T 3of5_A 2 NAMKKFFIIG-TDTEVGKTY--ISTKLIEVCEHQNIKSLC 38 (228)
T ss_dssp TTCEEEEEEE-SSSSSCHHH--HHHHHHHHHHHTTCCEEE
T ss_pred CCCcEEEEEe-CCCCCCHHH--HHHHHHHHHHHCCCeeEE
Confidence 5678888874 555555654 466799999999988764
No 428
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=20.38 E-value=85 Score=25.53 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=25.6
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 19 k~~lVTGas~-gIG~aia~~l~~~G~~V~~~ 48 (270)
T 3is3_A 19 KVALVTGSGR-GIGAAVAVHLGRLGAKVVVN 48 (270)
T ss_dssp CEEEESCTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 4678999985 99999999999999988775
No 429
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=20.34 E-value=1.1e+02 Score=24.63 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=20.3
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
.++|.|.|+++. ..+.+++.|+++|+.|+.-+
T Consensus 16 ~k~vlITGasgg--------iG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 16 DKVAIITGGAGG--------IGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp TCEEEEESTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCH--------HHHHHHHHHHHCCCEEEEEc
Confidence 356777765442 24567777778888877554
No 430
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=20.33 E-value=81 Score=25.64 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=11.2
Q ss_pred HHHHHHHHhCCCeEEEcC
Q 027287 41 IELGKELVARNIDLVYGG 58 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~GG 58 (225)
+.+++.|+++|+.|+.-+
T Consensus 19 ~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 19 RAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 456666677777766443
No 431
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.32 E-value=1.1e+02 Score=24.82 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=20.3
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGG 59 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg 59 (225)
++|.|.|+++. ..+.+++.|+++|+.|+..+-
T Consensus 8 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGARG--------MGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCH--------HHHHHHHHHHHCCCEEEEEeC
Confidence 46666765442 245677778888888775543
No 432
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.32 E-value=2.3e+02 Score=22.75 Aligned_cols=56 Identities=9% Similarity=-0.109 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 18 KFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 18 ~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
+.++|.|.|+++. ..+.+++.|+++|+.|+.-+-..--.+.+.+...+.|+.+..+
T Consensus 30 ~~k~vlITGasgg--------IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 85 (272)
T 1yb1_A 30 TGEIVLITGAGHG--------IGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85 (272)
T ss_dssp TTCEEEEETTTSH--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCch--------HHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEE
No 433
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=20.31 E-value=1.1e+02 Score=24.75 Aligned_cols=30 Identities=17% Similarity=0.218 Sum_probs=25.3
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (262)
T 1zem_A 8 KVCLVTGAGG-NIGLATALRLAEEGTAIALL 37 (262)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3678999984 99999999998999888776
No 434
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=20.31 E-value=3.3e+02 Score=21.67 Aligned_cols=26 Identities=8% Similarity=0.174 Sum_probs=13.3
Q ss_pred CcEEEEeCCCCchHHHHHHHHHHHcC
Q 027287 146 KPVGLLNVDGYYNSLLTFIDKAVEEG 171 (225)
Q Consensus 146 kPiill~~~g~w~~l~~~l~~~~~~g 171 (225)
.|+.++....+++++..++..+...+
T Consensus 133 ~~~~ilrp~~~~~~~~~~~~~~~~~~ 158 (289)
T 3e48_A 133 IDYTYVRMAMYMDPLKPYLPELMNMH 158 (289)
T ss_dssp CEEEEEEECEESTTHHHHHHHHHHHT
T ss_pred CCEEEEeccccccccHHHHHHHHHCC
Confidence 45555555555555555555444333
No 435
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=20.28 E-value=93 Score=24.31 Aligned_cols=29 Identities=17% Similarity=0.035 Sum_probs=20.3
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHH
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGK 45 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~ 45 (225)
.+|++++|++|+=++...-+.+.+++..+
T Consensus 4 ~~m~~~~v~~GsFdp~H~GH~~l~~~a~~ 32 (194)
T 1kam_A 4 GGSKKIGIFGGTFDPPHNGHLLMANEVLY 32 (194)
T ss_dssp --CCEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred CCCcEEEEEEeccccccHHHHHHHHHHHH
Confidence 44678999999998887777766655443
No 436
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=20.28 E-value=76 Score=23.15 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=20.6
Q ss_pred CCcceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 17 SKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 17 ~~~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
.+-+.|.|||.+.. .|...+..|.+.||.
T Consensus 89 ~~~~~ivvyC~~G~--------rs~~aa~~L~~~G~~ 117 (139)
T 3d1p_A 89 DSAKELIFYCASGK--------RGGEAQKVASSHGYS 117 (139)
T ss_dssp CTTSEEEEECSSSH--------HHHHHHHHHHTTTCC
T ss_pred CCCCeEEEECCCCc--------hHHHHHHHHHHcCCC
Confidence 35568999997631 355677888888985
No 437
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=20.27 E-value=1.3e+02 Score=24.67 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=15.9
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCC
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNI 52 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~ 52 (225)
.++|.|+.||..++.+ +.|++|++.| +.|+
T Consensus 40 ~~kv~IlYgS~tGnte---~~A~~La~~l-~~g~ 69 (219)
T 3hr4_A 40 RVRVTILFATETGKSE---ALAWDLGALF-SCAF 69 (219)
T ss_dssp SCEEEEEEECSSSHHH---HHHHHHHHHH-TTTS
T ss_pred CCcEEEEEECCchHHH---HHHHHHHHHH-HcCC
Confidence 3455565566666422 3456666655 3454
No 438
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=20.26 E-value=43 Score=27.98 Aligned_cols=54 Identities=9% Similarity=0.070 Sum_probs=31.1
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE-E-cCC--CccHHHHHHHHHHhcCCeE
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV-Y-GGG--SVGLMGLISQAVYDGGRHV 78 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv-~-GGg--~~GlM~a~a~gA~~aGG~v 78 (225)
++|.|+||+...-.+ +.-+||.|+++|+.+. + -+. ..+......+.+...|+.+
T Consensus 59 ~~v~VlcG~GNNGGD-----Glv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~ 116 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD-----GLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPV 116 (246)
T ss_dssp CEEEEEECSSHHHHH-----HHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEECCCCCHHH-----HHHHHHHHHHCCCeEEEEEcCCCCCCHHHHHHHHHHHHcCCcE
Confidence 589999987642123 3468888999998763 2 221 1133333334444566654
No 439
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=20.24 E-value=1.1e+02 Score=25.00 Aligned_cols=30 Identities=27% Similarity=0.309 Sum_probs=25.5
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 22 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 51 (273)
T 1ae1_A 22 TTALVTGGSK-GIGYAIVEELAGLGARVYTC 51 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCcc-hHHHHHHHHHHHCCCEEEEE
Confidence 4688999984 99999999998999888776
No 440
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=20.23 E-value=1.1e+02 Score=23.33 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=19.5
Q ss_pred cceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCe
Q 027287 19 FNRICVFCGSSAGKKSTYKDAAIELGKELVARNID 53 (225)
Q Consensus 19 ~~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 53 (225)
+++|.|+.+| .++ -.+.|+.+.+.|.+.|+.
T Consensus 4 mmkilii~~S-~g~---T~~la~~i~~~l~~~g~~ 34 (199)
T 2zki_A 4 KPNILVLFYG-YGS---IVELAKEIGKGAEEAGAE 34 (199)
T ss_dssp CCEEEEEECC-SSH---HHHHHHHHHHHHHHHSCE
T ss_pred CcEEEEEEeC-ccH---HHHHHHHHHHHHHhCCCE
Confidence 3466666667 442 235677888888766654
No 441
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.22 E-value=43 Score=25.15 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=17.3
Q ss_pred eEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 53 DLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 53 ~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
.+|-|||+.|++-|... .++|-.|+=+
T Consensus 5 V~IIGaGpaGL~aA~~L--a~~G~~V~v~ 31 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQAL--TAAGHQVHLF 31 (336)
T ss_dssp EEEECCSHHHHHHHHHH--HHTTCCEEEE
T ss_pred EEEECcCHHHHHHHHHH--HHCCCCEEEE
Confidence 35679999999866543 3455555444
No 442
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=20.21 E-value=82 Score=25.56 Aligned_cols=21 Identities=10% Similarity=0.170 Sum_probs=15.1
Q ss_pred HHHHHHHHHhCCCeEEEcCCC
Q 027287 40 AIELGKELVARNIDLVYGGGS 60 (225)
Q Consensus 40 A~~lG~~LA~~G~~lv~GGg~ 60 (225)
.+.+++.|+++|+.|+.-+-.
T Consensus 23 G~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 23 GRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 456778888899988755443
No 443
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=20.21 E-value=81 Score=25.82 Aligned_cols=17 Identities=24% Similarity=0.305 Sum_probs=9.7
Q ss_pred HHHHHHHHhCCCeEEEc
Q 027287 41 IELGKELVARNIDLVYG 57 (225)
Q Consensus 41 ~~lG~~LA~~G~~lv~G 57 (225)
+.+++.|+++|+.|+..
T Consensus 43 ~~ia~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 43 REMAMELGRRGCKVIVN 59 (283)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 44555666666665543
No 444
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=20.19 E-value=87 Score=25.14 Aligned_cols=30 Identities=23% Similarity=0.340 Sum_probs=25.3
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 15 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 44 (260)
T 2zat_A 15 KVALVTASTD-GIGLAIARRLAQDGAHVVVS 44 (260)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 4678999974 99999999998999888776
No 445
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=20.14 E-value=83 Score=25.40 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=25.3
Q ss_pred CCeEEEcCCCccHHHHHHHHHHhcCCeEEEE
Q 027287 51 NIDLVYGGGSVGLMGLISQAVYDGGRHVIGV 81 (225)
Q Consensus 51 G~~lv~GGg~~GlM~a~a~gA~~aGG~viGI 81 (225)
-..|||||+. |+=.++++...+.|.+|+.+
T Consensus 7 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 36 (257)
T 3imf_A 7 KVVIITGGSS-GMGKGMATRFAKEGARVVIT 36 (257)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3578999984 99999999998999888776
No 446
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=20.12 E-value=88 Score=24.87 Aligned_cols=30 Identities=20% Similarity=0.133 Sum_probs=17.0
Q ss_pred ceEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEEEcC
Q 027287 20 NRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGG 58 (225)
Q Consensus 20 ~~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv~GG 58 (225)
++|-|.|+++. ..+.+++.|++ |+.++.-+
T Consensus 6 k~vlITGas~g--------IG~~~a~~l~~-g~~v~~~~ 35 (245)
T 3e9n_A 6 KIAVVTGATGG--------MGIEIVKDLSR-DHIVYALG 35 (245)
T ss_dssp CEEEEESTTSH--------HHHHHHHHHTT-TSEEEEEE
T ss_pred CEEEEEcCCCH--------HHHHHHHHHhC-CCeEEEEe
Confidence 46666665542 23456666676 67666444
No 447
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=20.00 E-value=3.3e+02 Score=22.13 Aligned_cols=27 Identities=19% Similarity=0.243 Sum_probs=14.5
Q ss_pred eEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCeEE
Q 027287 21 RICVFCGSSAGKKSTYKDAAIELGKELVARNIDLV 55 (225)
Q Consensus 21 ~V~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lv 55 (225)
+|.|.|+++. ....+.+.|+++|+.|+
T Consensus 15 ~ilVtGatG~--------iG~~l~~~L~~~g~~V~ 41 (342)
T 2x4g_A 15 KYAVLGATGL--------LGHHAARAIRAAGHDLV 41 (342)
T ss_dssp EEEEESTTSH--------HHHHHHHHHHHTTCEEE
T ss_pred EEEEECCCcH--------HHHHHHHHHHHCCCEEE
Confidence 5666654432 23445555556666655
Done!