Query         027290
Match_columns 225
No_of_seqs    137 out of 1285
Neff          8.6 
Searched_HMMs 29240
Date          Mon Mar 25 12:33:26 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027290hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2p8e_A PPM1B beta isoform vari 100.0 2.6E-42 8.9E-47  294.3  23.0  190   18-224   100-299 (307)
  2 2i0o_A Ser/Thr phosphatase; be 100.0 5.4E-42 1.8E-46  291.9  18.6  189   20-223    86-304 (304)
  3 1a6q_A Phosphatase 2C; catalyt 100.0 8.1E-41 2.8E-45  292.8  22.4  191   17-224    92-293 (382)
  4 3qn1_B Protein phosphatase 2C  100.0 8.1E-41 2.8E-45  288.5  19.3  189   19-224   109-329 (337)
  5 2iq1_A Protein phosphatase 2C  100.0 2.1E-40 7.2E-45  278.2  20.4  185   20-224    69-263 (274)
  6 2irm_A Mitogen-activated prote 100.0 6.2E-41 2.1E-45  291.4  17.7  197   16-224    84-357 (358)
  7 3kdj_B Protein phosphatase 2C  100.0 5.4E-40 1.9E-44  281.0  20.1  185   20-224    97-306 (316)
  8 2i44_A Serine-threonine phosph 100.0 3.2E-39 1.1E-43  276.9  21.2  194   19-224   106-322 (324)
  9 4da1_A Protein phosphatase 1K, 100.0 5.9E-39   2E-43  281.8  19.8  185   20-224   183-377 (389)
 10 2j4o_A Mitogen-activated prote 100.0 1.5E-39 5.2E-44  286.5  15.6  196   18-224    98-367 (401)
 11 3d8k_A PP2C, protein phosphata 100.0 5.3E-39 1.8E-43  280.7  18.4  182   22-224    81-325 (377)
 12 2pnq_A [pyruvate dehydrogenase 100.0 3.3E-39 1.1E-43  288.8  15.8  193   21-224   160-456 (467)
 13 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.6E-37 5.4E-42  270.4  22.2  184   23-224    77-334 (364)
 14 1txo_A Putative bacterial enzy 100.0 1.1E-32 3.8E-37  225.9  17.1  171   19-224    63-237 (237)
 15 2pk0_A Serine/threonine protei 100.0 1.9E-32 6.5E-37  226.3  17.7  174   19-224    72-247 (250)
 16 2j82_A TPPHA, protein serine-t 100.0 1.1E-31 3.6E-36  220.4  17.1  169   21-222    67-240 (240)
 17 2jfr_A Ser-Thr phosphatase MSP 100.0   4E-31 1.4E-35  216.2  15.8  167   23-222    63-233 (234)
 18 3rnr_A Stage II sporulation E  100.0 4.1E-31 1.4E-35  213.7   9.1  157   27-222    47-211 (211)
 19 3t91_A Stage II sporulation pr  99.7 1.2E-16 4.2E-21  130.8  15.7  140   27-224    73-221 (242)
 20 3pu9_A Protein serine/threonin  99.7 2.4E-15 8.3E-20  123.4  16.4  138   27-224    76-225 (242)
 21 3f79_A Probable two-component   99.5 4.1E-14 1.4E-18  116.7  11.7  137   26-224   108-254 (255)
 22 3zt9_A Serine phosphatase; hyd  99.5 6.9E-13 2.4E-17  105.1  13.5  124   29-221    68-193 (193)
 23 3ke6_A Protein RV1364C/MT1410;  99.0 2.2E-08 7.6E-13   87.6  17.3  124   47-224   117-258 (399)
 24 3eq2_A Probable two-component   98.1 2.9E-05 9.9E-10   67.2  12.1  134   29-224   250-393 (394)
 25 1hq0_A CNF1, cytotoxic necroti  43.6      21 0.00072   29.2   3.7   25   45-70    142-166 (295)
 26 2krx_A ASL3597 protein; struct  42.7      65  0.0022   21.6   5.4   47  159-205     8-66  (94)
 27 4hg1_A Putative cytoplasmic pr  23.6      60   0.002   24.5   3.0   18   61-78    125-142 (225)

No 1  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00  E-value=2.6e-42  Score=294.29  Aligned_cols=190  Identities=33%  Similarity=0.546  Sum_probs=169.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcC--CCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccceee
Q 027290           18 DVKAAKKAILDGFRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKA   95 (225)
Q Consensus        18 ~~~~~~~~l~~a~~~~~~~l~~~~~~--~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~   95 (225)
                      +.+.+.++|.++|..+|+.+.+....  ....+|||++++++.++++|+||+||||+|++|++               ++
T Consensus       100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g---------------~~  164 (307)
T 2p8e_A          100 SVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG---------------QV  164 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------EE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC---------------cc
Confidence            35678999999999999999886532  23458999999999999999999999999999999               99


Q ss_pred             EecCCCCCCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCC--------CcccCCceEEEEecCCCeEEEEe
Q 027290           96 IVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVTERDHFIILG  167 (225)
Q Consensus        96 ~~lt~DH~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~--------~v~~~p~i~~~~l~~~d~~lil~  167 (225)
                      .+||+||++.++.|++||..+|+.+. .+|++|.+.+||+|||..+|..        .++++|++..+++.++|+|||||
T Consensus       165 ~~lT~DH~~~~~~E~~rI~~~gg~v~-~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~  243 (307)
T 2p8e_A          165 CFSTQDHKPCNPREKERIQNAGGSVM-IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILA  243 (307)
T ss_dssp             EEECCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEE
T ss_pred             ccCCCCCCCCCHHHHHHHHHcCCEEE-eCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEE
Confidence            99999999999999999999999987 5688888999999999998853        36889999999999988899999


Q ss_pred             cCCcccccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          168 CDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       168 SDGl~d~l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ||||||+++++|+.+++...+....+++.+|+.|++.|+ .+|+.||||||||++..
T Consensus       244 SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~  299 (307)
T 2p8e_A          244 CDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCL-HKGSRDNMSIVLVCFSN  299 (307)
T ss_dssp             CHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEEC--
T ss_pred             CCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HcCCCCCeEEEEEECCC
Confidence            999999999999999998876656789999999999997 79999999999999864


No 2  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00  E-value=5.4e-42  Score=291.93  Aligned_cols=189  Identities=36%  Similarity=0.617  Sum_probs=163.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhh----------------cCCCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCC
Q 027290           20 KAAKKAILDGFRKTDESLLQES----------------VSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGS   83 (225)
Q Consensus        20 ~~~~~~l~~a~~~~~~~l~~~~----------------~~~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~   83 (225)
                      .++.++|.++|..+|+.+.+..                ......+|||++++++.++++|++|+||||+|++|++     
T Consensus        86 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g-----  160 (304)
T 2i0o_A           86 KEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG-----  160 (304)
T ss_dssp             TCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETT-----
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECC-----
Confidence            4578899999999999886542                1124568999999999999999999999999999999     


Q ss_pred             CCCCccccceeeEecCCCCCCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcC--------CCcccCCceEEE
Q 027290           84 NNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK--------FGVVATPDIHSF  155 (225)
Q Consensus        84 ~~~~~~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~--------~~v~~~p~i~~~  155 (225)
                                ++++||+||++.++.|++||...||.+...+|++|.+.+||+||+..+|.        ++++++|++..+
T Consensus       161 ----------~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~  230 (304)
T 2i0o_A          161 ----------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKI  230 (304)
T ss_dssp             ----------EEEECCCCCCTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEE
T ss_pred             ----------EEEEcCCCcCCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEE
Confidence                      99999999999999999999999999987789999999999999998874        356889999999


Q ss_pred             EecCCCeEEEEecCCcccccChHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHh-----CCCCCCcEEEEEEec
Q 027290          156 EVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKE-GLSVTAVSRRLVREAVLE-----RRCKDNCTAIVIIFR  223 (225)
Q Consensus       156 ~l~~~d~~lil~SDGl~d~l~~~ei~~~i~~~~~~-~~~~~~~a~~L~~~a~~~-----~~~~DNiTvivi~~~  223 (225)
                      ++.++|.|||||||||||+++++|+.+++...+.. ..+++.+|+.|++.|+..     +++.||+|||||+|+
T Consensus       231 ~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~  304 (304)
T 2i0o_A          231 TVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK  304 (304)
T ss_dssp             ECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred             EcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence            99999889999999999999999999999887655 568999999999999632     468999999999984


No 3  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00  E-value=8.1e-41  Score=292.75  Aligned_cols=191  Identities=35%  Similarity=0.574  Sum_probs=172.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhc--CCCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCcccccee
Q 027290           17 LDVKAAKKAILDGFRKTDESLLQESV--SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK   94 (225)
Q Consensus        17 ~~~~~~~~~l~~a~~~~~~~l~~~~~--~~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~   94 (225)
                      .+...+.++|.++|..+|+.+.+.+.  .....+|||++++++.++++|++|+||||+|++|++               +
T Consensus        92 ~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g---------------~  156 (382)
T 1a6q_A           92 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------K  156 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------E
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECC---------------c
Confidence            35678899999999999999987653  234568999999999999999999999999999999               9


Q ss_pred             eEecCCCCCCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCC--------CcccCCceEEEEec-CCCeEEE
Q 027290           95 AIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVT-ERDHFII  165 (225)
Q Consensus        95 ~~~lt~DH~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~--------~v~~~p~i~~~~l~-~~d~~li  165 (225)
                      +.+||.||++.++.|++||..+||.+. ..|++|.+.+||+|||..+|..        .++++|++..+.+. ++|+|||
T Consensus       157 ~~~LT~DHs~~~~~E~~RI~~~gg~v~-~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~ll  235 (382)
T 1a6q_A          157 VHFFTQDHKPSNPLEKERIQNAGGSVM-IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII  235 (382)
T ss_dssp             EEEECCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEE
T ss_pred             eEEeCCCCCCCCHHHHHHHHhcCcEEe-cccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEE
Confidence            999999999999999999999999987 4688888999999999988853        46889999999998 7788999


Q ss_pred             EecCCcccccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          166 LGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       166 l~SDGl~d~l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ||||||||+++++|+.+++...+....+++.+|+.|++.|+ .+|+.||+|||||+|..
T Consensus       236 LaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~  293 (382)
T 1a6q_A          236 LACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-YKGSRDNMSVILICFPN  293 (382)
T ss_dssp             EECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEECTT
T ss_pred             EeccCccCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-hcCCcCCEEEEEEEecC
Confidence            99999999999999999998876656789999999999997 79999999999999863


No 4  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00  E-value=8.1e-41  Score=288.50  Aligned_cols=189  Identities=28%  Similarity=0.411  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhc-------------CCCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCC
Q 027290           19 VKAAKKAILDGFRKTDESLLQESV-------------SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNN   85 (225)
Q Consensus        19 ~~~~~~~l~~a~~~~~~~l~~~~~-------------~~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~   85 (225)
                      ...+.++|.++|.++|+.+.....             .....+|||++++++.++++|++|+||||+|++|++       
T Consensus       109 ~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g-------  181 (337)
T 3qn1_B          109 QVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-------  181 (337)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETT-------
T ss_pred             HHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCC-------
Confidence            467889999999999999987641             123458999999999999999999999999999999       


Q ss_pred             CCccccceeeEecCCCCCCCCHHHHHHHHHcCCEEeeC--CcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeE
Q 027290           86 HLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSN--GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHF  163 (225)
Q Consensus        86 ~~~~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~~~~~--~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~  163 (225)
                              ++++||.||++.++.|+.||...||.+.+.  +|++|.+.++|+||+..+++. ++++|++..+.+.+.++|
T Consensus       182 --------~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~-v~~~pdv~~~~~~~~~d~  252 (337)
T 3qn1_B          182 --------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDEC  252 (337)
T ss_dssp             --------EEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEE
T ss_pred             --------EeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCC-CCCcceEEEEEeCCCCCE
Confidence                    999999999999999999999999999763  588899999999999999876 899999999999777889


Q ss_pred             EEEecCCcccccChHHHHHHHHHHHhc-----------------CCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          164 IILGCDGLWGVFGPSDAVEFVQKLLKE-----------------GLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       164 lil~SDGl~d~l~~~ei~~~i~~~~~~-----------------~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ||||||||||+++++|+.+++...+..                 ..+++.+|+.|++.|+ .+|+.||||||||+|+.
T Consensus       253 llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~l~~  329 (337)
T 3qn1_B          253 LILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL-QKGSKDNISIIVIDLKA  329 (337)
T ss_dssp             EEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHH-HTTCCSCEEEEEEECCS
T ss_pred             EEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHH-HcCCCCCEEEEEEEecC
Confidence            999999999999999999998764311                 2357899999999997 79999999999999974


No 5  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=278.18  Aligned_cols=185  Identities=26%  Similarity=0.434  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcC----CCCCCCceeEEEEEeC-CeEEEEEcccCcEEEEeeccCCCCCCCCcccccee
Q 027290           20 KAAKKAILDGFRKTDESLLQESVS----GGWQDGATAVCIWILG-RTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK   94 (225)
Q Consensus        20 ~~~~~~l~~a~~~~~~~l~~~~~~----~~~~~GtT~~~~~i~~-~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~   94 (225)
                      .++.++|.++|..+|+.+.+....    ....+|||++++++.+ +++|++|+||||+|++|++               +
T Consensus        69 ~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g---------------~  133 (274)
T 2iq1_A           69 KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------K  133 (274)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------------E
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCC---------------E
Confidence            457889999999999999877532    3455899999999985 5999999999999999999               9


Q ss_pred             eEecCCCCCCCCHHHHHHHHHcCCEEeeCC----cccceeeeeccccCccCcCCCcccCCceEEEEecCC-CeEEEEecC
Q 027290           95 AIVVTRVHKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTER-DHFIILGCD  169 (225)
Q Consensus        95 ~~~lt~DH~~~~~~e~~ri~~~g~~~~~~~----r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~-d~~lil~SD  169 (225)
                      +.+||.||++..+.|+.||.++||.+.++.    ++++.+.+||+||+..+|+++++++|++..+++.++ |+|||||||
T Consensus       134 ~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SD  213 (274)
T 2iq1_A          134 PMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTD  213 (274)
T ss_dssp             EEECCCCCCTTSHHHHHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECH
T ss_pred             eeECCCCCCCcCHHHHHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEcc
Confidence            999999999999999999999999998642    567888999999999999988999999999999975 679999999


Q ss_pred             CcccccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          170 GLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       170 Gl~d~l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ||||+++++|+.+++..    ..+++.+|+.|++.|+ .+|+.||+||||+++..
T Consensus       214 Gl~d~l~~~ei~~~~~~----~~~~~~~a~~L~~~A~-~~g~~DNiTvivv~~~~  263 (274)
T 2iq1_A          214 GINFMVNSQEICDFVNQ----CHDPNEAAHAVTEQAI-QYGTEDNSTAVVVPFGA  263 (274)
T ss_dssp             HHHTTCCHHHHHHHHHT----SSSHHHHHHHHHHHHH-HTTCCSCEEEEEEECTT
T ss_pred             CcccCCCHHHHHHHHHH----cCCHHHHHHHHHHHHH-HcCCCCCeEEEEEEccC
Confidence            99999999999988754    3589999999999997 79999999999999864


No 6  
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00  E-value=6.2e-41  Score=291.41  Aligned_cols=197  Identities=19%  Similarity=0.283  Sum_probs=169.5

Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHhhhc-------------------------------------CCCCCCCceeEEEEEe
Q 027290           16 HLDVKAAKKAILDGFRKTDESLLQESV-------------------------------------SGGWQDGATAVCIWIL   58 (225)
Q Consensus        16 ~~~~~~~~~~l~~a~~~~~~~l~~~~~-------------------------------------~~~~~~GtT~~~~~i~   58 (225)
                      ......+.++|.++|..+++.+.+...                                     .....+|||++++++.
T Consensus        84 ~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~  163 (358)
T 2irm_A           84 CNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIH  163 (358)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEE
Confidence            346778999999999999999876321                                     1234589999999999


Q ss_pred             CCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecCCCCCCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccC
Q 027290           59 GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD  138 (225)
Q Consensus        59 ~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd  138 (225)
                      ++++|+|||||||+|++|+.          +++.|++++||.||+|.++.|++||..+|+.+. ..|+.|.+ +||+|||
T Consensus       164 ~~~l~vAnvGDSRa~l~r~~----------~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~-~~r~~g~l-lTRalGd  231 (358)
T 2irm_A          164 RSHLYLGNIGNCRALLCKTD----------EHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQ-NFEGVPLY-STRCIGN  231 (358)
T ss_dssp             SSEEEEEEESSCEEEEEECC----------TTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGG-GGTTCTTC-BSBCEEC
T ss_pred             CCEEEEEEcccCeEEEEEec----------CCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEe-ccCcCCEE-cccCCcC
Confidence            99999999999999999973          112457999999999999999999999999987 46777766 9999999


Q ss_pred             ccCcC-------------CCcccCCceEE-EEecCCCeEEEEecCCcccccC----------hHHHHHHHHHHHhcCCCH
Q 027290          139 RQFKK-------------FGVVATPDIHS-FEVTERDHFIILGCDGLWGVFG----------PSDAVEFVQKLLKEGLSV  194 (225)
Q Consensus       139 ~~~k~-------------~~v~~~p~i~~-~~l~~~d~~lil~SDGl~d~l~----------~~ei~~~i~~~~~~~~~~  194 (225)
                      ..+|.             ++++++|++.. +++.++|+|||||||||||+++          ++|+++++...+....++
T Consensus       232 ~~~K~~~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~  311 (358)
T 2irm_A          232 YLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTL  311 (358)
T ss_dssp             HHHHTTGGGSSSSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSH
T ss_pred             HHHhccccccccccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCH
Confidence            88764             46899999995 9999999999999999999999          999999999887666799


Q ss_pred             HHHHHHHHHHHHHh--------------CC--CCCCcEEEEEEecC
Q 027290          195 TAVSRRLVREAVLE--------------RR--CKDNCTAIVIIFRH  224 (225)
Q Consensus       195 ~~~a~~L~~~a~~~--------------~~--~~DNiTvivi~~~~  224 (225)
                      +.+|+.|++.|+..              +|  +.||||||||+|.+
T Consensus       312 ~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~  357 (358)
T 2irm_A          312 GGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY  357 (358)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred             HHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence            99999999999742              46  89999999999864


No 7  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00  E-value=5.4e-40  Score=281.00  Aligned_cols=185  Identities=29%  Similarity=0.493  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecC
Q 027290           20 KAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVT   99 (225)
Q Consensus        20 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt   99 (225)
                      +.+.++|.++|.++++.+...   ....+|||++++++.++++|++|+||||+|++|++               ++.+||
T Consensus        97 ~~~~~~l~~a~~~~~~~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g---------------~~~~lT  158 (316)
T 3kdj_B           97 EKWKKALFNSFLRVDSEIESV---APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK---------------TALPLS  158 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGT---SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------EEEESC
T ss_pred             HHHHHHHHHHHHHHHHHHhcc---cCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECC---------------EecccC
Confidence            467889999999999988543   23468999999999999999999999999999999               999999


Q ss_pred             CCCCCCCHHHHHHHHHcCCEEee--CCcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccCh
Q 027290          100 RVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGP  177 (225)
Q Consensus       100 ~DH~~~~~~e~~ri~~~g~~~~~--~~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~  177 (225)
                      .||++.++.|+.||...|+.+.+  .+|+.|.+.+||++||..+++. ++++|++..+.+.+.++|||||||||||++++
T Consensus       159 ~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~-~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~  237 (316)
T 3kdj_B          159 VDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPS-IIPDPEVTAVKRVKEDDCLILASDGVWDVMTD  237 (316)
T ss_dssp             CCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTSSCH
T ss_pred             CCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCC-cCCCCceEEEEecCCCCEEEEEccCcccCCCH
Confidence            99999999999999999999986  3588999999999999998875 89999999999666678999999999999999


Q ss_pred             HHHHHHHHHHHh-----------------------cCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          178 SDAVEFVQKLLK-----------------------EGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       178 ~ei~~~i~~~~~-----------------------~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      +|+.+++...+.                       ...+++.+|+.|++.|+ .+|+.||+|||||++++
T Consensus       238 ~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~-~~g~~DNiTvivv~l~~  306 (316)
T 3kdj_B          238 EEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAI-QRGSKDNISVVVVDLKP  306 (316)
T ss_dssp             HHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHH-HTTCCSCEEEEEEECSC
T ss_pred             HHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHH-HcCCCCCeEEEEEEccC
Confidence            999999876321                       12257899999999997 89999999999999975


No 8  
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00  E-value=3.2e-39  Score=276.86  Aligned_cols=194  Identities=25%  Similarity=0.402  Sum_probs=163.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCC-CCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEe
Q 027290           19 VKAAKKAILDGFRKTDESLLQESVSG-GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIV   97 (225)
Q Consensus        19 ~~~~~~~l~~a~~~~~~~l~~~~~~~-~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (225)
                      ...+.++|.++|..+|+.+.+..... ...+|+|++++++.++++|+||+||||+|+++++           +..+++++
T Consensus       106 ~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~-----------~~g~~~~~  174 (324)
T 2i44_A          106 PQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVET-----------PNGLNCEF  174 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEEEEEE-----------TTEEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEccCceEEEEecc-----------CCCceEEE
Confidence            45678899999999999998876433 3345566666668999999999999999999973           00136899


Q ss_pred             cCCCCCCCCHHHHHHHHHcCCEEeeC-------CcccceeeeeccccC----ccC---------cCCCcccCCceEEEEe
Q 027290           98 VTRVHKAIYPQERARIQKSGGTVSSN-------GRLQGRLEVSRAFGD----RQF---------KKFGVVATPDIHSFEV  157 (225)
Q Consensus        98 lt~DH~~~~~~e~~ri~~~g~~~~~~-------~r~~g~~~~sR~lGd----~~~---------k~~~v~~~p~i~~~~l  157 (225)
                      ||.||++.++.|++||.++||.+...       .+..|.++++|++||    ..+         ++++++++|++..+++
T Consensus       175 LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l  254 (324)
T 2i44_A          175 LTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRV  254 (324)
T ss_dssp             SCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEEC
T ss_pred             CCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEc
Confidence            99999999999999999999999421       134677899999999    443         3456789999999999


Q ss_pred             cCCCeEEEEecCCcccccChHHHHHHHHHHHhcCCCHHH--HHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          158 TERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTA--VSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       158 ~~~d~~lil~SDGl~d~l~~~ei~~~i~~~~~~~~~~~~--~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      .++|+|||||||||||+++++|+++++......+.+++.  +|+.|++.|+ .+|+.||||||||+|.+
T Consensus       255 ~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~-~~g~~DNiTvivv~~~~  322 (324)
T 2i44_A          255 TPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQS-RNQSADNITAMTVFFKK  322 (324)
T ss_dssp             CTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH-TTCCCCCEEEEEEEEC-
T ss_pred             CCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCCCCCEEEEEEeeC
Confidence            998779999999999999999999999887766678999  9999999997 79999999999999975


No 9  
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00  E-value=5.9e-39  Score=281.78  Aligned_cols=185  Identities=26%  Similarity=0.437  Sum_probs=165.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCC----CCCCCceeEEEEEeCC-eEEEEEcccCcEEEEeeccCCCCCCCCcccccee
Q 027290           20 KAAKKAILDGFRKTDESLLQESVSG----GWQDGATAVCIWILGR-TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK   94 (225)
Q Consensus        20 ~~~~~~l~~a~~~~~~~l~~~~~~~----~~~~GtT~~~~~i~~~-~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~   94 (225)
                      ..+.++|..+|..+++.+.+.....    ...+|||++++++.++ ++|+||+||||+|++|++               +
T Consensus       183 ~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g---------------~  247 (389)
T 4da1_A          183 KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------K  247 (389)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------------E
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECC---------------E
Confidence            4568889999999999998765322    3458999999999876 999999999999999999               9


Q ss_pred             eEecCCCCCCCCHHHHHHHHHcCCEEeeC----CcccceeeeeccccCccCcCCCcccCCceEEEEecCC-CeEEEEecC
Q 027290           95 AIVVTRVHKAIYPQERARIQKSGGTVSSN----GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTER-DHFIILGCD  169 (225)
Q Consensus        95 ~~~lt~DH~~~~~~e~~ri~~~g~~~~~~----~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~-d~~lil~SD  169 (225)
                      +++||.||++.++.|++||...||.+..+    .++++.+.+||+||+..+|++++.+.|++..+.+.++ ++|||||||
T Consensus       248 ~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SD  327 (389)
T 4da1_A          248 PMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTD  327 (389)
T ss_dssp             EEECCCCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECH
T ss_pred             eEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeC
Confidence            99999999999999999999999998753    4778889999999999999999999999999999864 689999999


Q ss_pred             CcccccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          170 GLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       170 Gl~d~l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ||||+++++|+.+++...    .+++.+|+.|++.|+ .+|+.||+|||||+|..
T Consensus       328 GL~d~l~~~ei~~il~~~----~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~  377 (389)
T 4da1_A          328 GINFMVNSQEICDFVNQC----HDPNEAAHAVTEQAI-QYGTEDNSTAVVVPFGA  377 (389)
T ss_dssp             HHHTTCCHHHHHHHHHHS----SSHHHHHHHHHHHHH-HHTCCSCEEEEEEEECC
T ss_pred             CcccCCCHHHHHHHHHhc----CCHHHHHHHHHHHHH-HcCCCCCeEEEEEEecC
Confidence            999999999999988652    589999999999997 79999999999999863


No 10 
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00  E-value=1.5e-39  Score=286.47  Aligned_cols=196  Identities=20%  Similarity=0.307  Sum_probs=166.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhc------------------------------------CCCCCCCceeEEEEEeCCe
Q 027290           18 DVKAAKKAILDGFRKTDESLLQESV------------------------------------SGGWQDGATAVCIWILGRT   61 (225)
Q Consensus        18 ~~~~~~~~l~~a~~~~~~~l~~~~~------------------------------------~~~~~~GtT~~~~~i~~~~   61 (225)
                      ....+.++|.++|..+++.+.+...                                    .....+|||++++++.+++
T Consensus        98 ~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~  177 (401)
T 2j4o_A           98 AEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNK  177 (401)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTE
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCE
Confidence            4678899999999999988866311                                    0123589999999999999


Q ss_pred             EEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecCCCCCCCCHHHHHHHHHcCCEEee--CCcccceeeeeccccCc
Q 027290           62 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVSRAFGDR  139 (225)
Q Consensus        62 l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~~~~--~~r~~g~~~~sR~lGd~  139 (225)
                      +|+|||||||+|+++++          +++ +++++||.||+|.++.|++||..+|+.+..  ..|+.|.+.+||+|||.
T Consensus       178 l~vanvGDSRa~l~r~~----------~~g-~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~  246 (401)
T 2j4o_A          178 LYVANVGTNRALLCKST----------VDG-LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDY  246 (401)
T ss_dssp             EEEEEESSCEEEEEEEC----------SSS-EEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECH
T ss_pred             EEEEEccCceEEEEEcC----------CCC-ceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCH
Confidence            99999999999999987          111 579999999999999999999999998632  34777788999999998


Q ss_pred             cCcC-------------CCcccCCceEE-EEecCCCeEEEEecCCccccc--------ChHHHHHHHHHHHhcCCCHHHH
Q 027290          140 QFKK-------------FGVVATPDIHS-FEVTERDHFIILGCDGLWGVF--------GPSDAVEFVQKLLKEGLSVTAV  197 (225)
Q Consensus       140 ~~k~-------------~~v~~~p~i~~-~~l~~~d~~lil~SDGl~d~l--------~~~ei~~~i~~~~~~~~~~~~~  197 (225)
                      .+|.             ++++++|++.. +.+.++|+|||||||||||+|        +++|+++++...+....+++.+
T Consensus       247 ~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~  326 (401)
T 2j4o_A          247 KVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAV  326 (401)
T ss_dssp             HHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHH
T ss_pred             hhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHH
Confidence            7663             46899999996 999998899999999999999        8999999998877666789999


Q ss_pred             HHHHHHHHHH------hCCC--------CCCcEEEEEEecC
Q 027290          198 SRRLVREAVL------ERRC--------KDNCTAIVIIFRH  224 (225)
Q Consensus       198 a~~L~~~a~~------~~~~--------~DNiTvivi~~~~  224 (225)
                      |+.|++.|++      .+|+        .||||||||+|.+
T Consensus       327 a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~  367 (401)
T 2j4o_A          327 AQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGY  367 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBC
T ss_pred             HHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCC
Confidence            9999999963      2565        8999999999964


No 11 
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00  E-value=5.3e-39  Score=280.71  Aligned_cols=182  Identities=28%  Similarity=0.422  Sum_probs=158.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCCCceeEEEEEe-------------------------------------------
Q 027290           22 AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWIL-------------------------------------------   58 (225)
Q Consensus        22 ~~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~-------------------------------------------   58 (225)
                      ..++|.++|.++|+.+.+..    ..+|||++++++.                                           
T Consensus        81 ~~~al~~af~~~d~~l~~~~----~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~  156 (377)
T 3d8k_A           81 NEEEITRQFERMDGDLRAAN----LPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFR  156 (377)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT----CCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGG
T ss_pred             HHHHHHHHHHHHHHHHHhcc----cCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecc
Confidence            36889999999999998874    2589999998874                                           


Q ss_pred             --------CCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecCCCCCCCCHHHHHHHHHcCCEEee-CC--ccc
Q 027290           59 --------GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS-NG--RLQ  127 (225)
Q Consensus        59 --------~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~~~~-~~--r~~  127 (225)
                              ++++|+||+||||+|++|++               ++.+||.||+|.++.|+.||..+|+.+.. ++  |++
T Consensus       157 ~~p~~~~~~~~l~vanvGDSRa~l~r~g---------------~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~  221 (377)
T 3d8k_A          157 RDPRAAKGIYTIHVASLGNSRCVLKSGR---------------TAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLG  221 (377)
T ss_dssp             GCGGGTTCEEEEEEEEESSCEEEEEETT---------------EEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEET
T ss_pred             cccccccCCCeEEEEEcccceEEEEECC---------------EEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEc
Confidence                    14899999999999999998               99999999999999999999999999873 44  888


Q ss_pred             ceeeeeccccCccCcC--------CCcccCCceEEEEecCCCeEEEEecCCcccccChHHHHHHHHHHHh-cCCCHHHHH
Q 027290          128 GRLEVSRAFGDRQFKK--------FGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK-EGLSVTAVS  198 (225)
Q Consensus       128 g~~~~sR~lGd~~~k~--------~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~~ei~~~i~~~~~-~~~~~~~~a  198 (225)
                      |.+++||+|||..+|.        +.++++|++..+++.++| |||||||||||+++++|+++.+...+. ...+++.+|
T Consensus       222 G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a  300 (377)
T 3d8k_A          222 GVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAA  300 (377)
T ss_dssp             TTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHH
T ss_pred             CceecceeecChhhhcccccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHH
Confidence            9999999999999884        468899999999999886 899999999999999998875543221 134789999


Q ss_pred             HHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          199 RRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       199 ~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      +.|++.|+ .+|+.||||||||+|..
T Consensus       301 ~~Lv~~A~-~~g~~DNiTvivv~~~~  325 (377)
T 3d8k_A          301 KAMVVNAK-RRKVTKNISTFVRHLPE  325 (377)
T ss_dssp             HHHHHTTT-TSSCCSCCCEEEEECCS
T ss_pred             HHHHHHHH-hcCCCCCEEEEEEEecC
Confidence            99999996 89999999999999864


No 12 
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00  E-value=3.3e-39  Score=288.77  Aligned_cols=193  Identities=30%  Similarity=0.430  Sum_probs=161.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcC------------CCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCc
Q 027290           21 AAKKAILDGFRKTDESLLQESVS------------GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLD   88 (225)
Q Consensus        21 ~~~~~l~~a~~~~~~~l~~~~~~------------~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~   88 (225)
                      .+.++|.+||.++|+.|......            ....+|||++++++.++++|+||+||||+|+++.+          
T Consensus       160 ~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~----------  229 (467)
T 2pnq_A          160 DVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQE----------  229 (467)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEEC----------
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEec----------
Confidence            57889999999999999876532            12358999999999999999999999999999864          


Q ss_pred             cccceeeEecCCCCCCCCHHHHHHHHHcCCE-----EeeCCcccceeeeeccccCccCcC--------------------
Q 027290           89 ELSSLKAIVVTRVHKAIYPQERARIQKSGGT-----VSSNGRLQGRLEVSRAFGDRQFKK--------------------  143 (225)
Q Consensus        89 ~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~-----~~~~~r~~g~~~~sR~lGd~~~k~--------------------  143 (225)
                      .++.|.+++||.||++.++.|++||..+|+.     +...+|+.|.+.+||+|||..+|.                    
T Consensus       230 ~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~  309 (467)
T 2pnq_A          230 EDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNE  309 (467)
T ss_dssp             TTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC------
T ss_pred             CCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhccccccccccc
Confidence            1235679999999999999999999999853     223678999999999999998762                    


Q ss_pred             ------------CCcccCCceEEEEecCCCeEEEEecCCcccccChHHHHHHHHHHHhcCC--CH---------------
Q 027290          144 ------------FGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGL--SV---------------  194 (225)
Q Consensus       144 ------------~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~~ei~~~i~~~~~~~~--~~---------------  194 (225)
                                  ++++++|+|..+++.++|.|||||||||||+|+++|+++++........  +|               
T Consensus       310 ~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~  389 (467)
T 2pnq_A          310 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHG  389 (467)
T ss_dssp             -----CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC----------------
T ss_pred             ccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHH
Confidence                        3478999999999999999999999999999999999999988763210  11               


Q ss_pred             ---------------HHHHHHHHHHHHHhCC-----------------------CCCCcEEEEEEecC
Q 027290          195 ---------------TAVSRRLVREAVLERR-----------------------CKDNCTAIVIIFRH  224 (225)
Q Consensus       195 ---------------~~~a~~L~~~a~~~~~-----------------------~~DNiTvivi~~~~  224 (225)
                                     +.+|..|++.|+ .++                       +.||||||||+|..
T Consensus       390 ~l~~r~~~~~~~~~~~naA~~Lir~Al-~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~  456 (467)
T 2pnq_A          390 LLTERRAKMSSVFEDQNAATHLIRHAV-GNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNS  456 (467)
T ss_dssp             ---------------CCHHHHHHHHHH-C-------------------------CCSCEEEEEEEECH
T ss_pred             HHHHhhhcccCCchhhHHHHHHHHHHh-cCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence                           568999999997 333                       48999999999863


No 13 
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00  E-value=1.6e-37  Score=270.37  Aligned_cols=184  Identities=26%  Similarity=0.428  Sum_probs=157.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCCCceeEEEEEeC-------------------------------------------
Q 027290           23 KKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILG-------------------------------------------   59 (225)
Q Consensus        23 ~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~~-------------------------------------------   59 (225)
                      .+.|.++|..+|+.+.+..... ..+|||++++++.+                                           
T Consensus        77 ~~~l~~a~~~~d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~  155 (364)
T 2isn_A           77 FAEVKKACLSLDAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVG  155 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CC
T ss_pred             HHHHHHHHHHHHHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccc
Confidence            4678899999999998765432 46899999998852                                           


Q ss_pred             -----------------CeEEEEEcccCcEEEE-eeccCCCCCCCCccccceeeEecCCCCCCCCHHHHHHHHHcCCEEe
Q 027290           60 -----------------RTVFVANIGDAKAVVA-RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS  121 (225)
Q Consensus        60 -----------------~~l~~anvGDSr~~l~-~~~~~~~~~~~~~~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~~~  121 (225)
                                       .++|+||+||||+|++ +++               ++.+||+||++.++.|+.||.++||.+.
T Consensus       156 ~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g---------------~~~~LT~DH~~~~~~e~~rI~~~gG~v~  220 (364)
T 2isn_A          156 RYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDG---------------GLTRLSKDHKPNHPTEASRIEKAGGSVE  220 (364)
T ss_dssp             SSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTS---------------CEEECCCCCCTTSHHHHHHHHHTTCCEE
T ss_pred             cccccccccccccccCccEEEEEECccCEEEEEeeCC---------------EEEEcCcCCCCCCHHHHHHHHHcCCeEe
Confidence                             3899999999999999 567               8999999999999999999999999987


Q ss_pred             eC--CcccceeeeeccccCccCcC--------CCcccCCceEEEEecCCCeEEEEecCCcccccC--hHHHHHHHHHHH-
Q 027290          122 SN--GRLQGRLEVSRAFGDRQFKK--------FGVVATPDIHSFEVTERDHFIILGCDGLWGVFG--PSDAVEFVQKLL-  188 (225)
Q Consensus       122 ~~--~r~~g~~~~sR~lGd~~~k~--------~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~--~~ei~~~i~~~~-  188 (225)
                      ..  .|+++.+.+||+|||..+|.        ++++++|++..+.+.++| |||||||||||+++  ++++.+++...+ 
T Consensus       221 ~~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~~~~~  299 (364)
T 2isn_A          221 TFDVPRVDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWAYVRDLTVAEMQ  299 (364)
T ss_dssp             ESSSEEETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHHHHHHHHHHHHH
T ss_pred             cCCCcccCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHHHHHh
Confidence            64  36678889999999998874        457899999999999876 99999999999976  889888765443 


Q ss_pred             hcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          189 KEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       189 ~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ....+++.+|+.|++.|+ .+|+.||+|||||+|.+
T Consensus       300 ~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~  334 (364)
T 2isn_A          300 RSKGDLEEVAARVMDYAY-DMNSQDNISVMLVAFHN  334 (364)
T ss_dssp             HTTSCHHHHHHHHHHHHH-HTTCCSCEEEEEEEECS
T ss_pred             hcCCCHHHHHHHHHHHHH-hcCCCCCEEEEEEEcCC
Confidence            445689999999999997 79999999999999864


No 14 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00  E-value=1.1e-32  Score=225.94  Aligned_cols=171  Identities=19%  Similarity=0.213  Sum_probs=138.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCC--CCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeE
Q 027290           19 VKAAKKAILDGFRKTDESLLQESVSGG--WQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAI   96 (225)
Q Consensus        19 ~~~~~~~l~~a~~~~~~~l~~~~~~~~--~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~   96 (225)
                      ...+.+.|.++|..+++.+.+......  ..+|||++++++.+++++++|+||||+|+++++               ++.
T Consensus        63 ~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g---------------~~~  127 (237)
T 1txo_A           63 GGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDG---------------ELT  127 (237)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------------EEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCC---------------EeE
Confidence            346788999999999999987654332  347999999999999999999999999999988               999


Q ss_pred             ecCCCCCCCCHHHHHHHHHcCCEEeeCC--cccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccc
Q 027290           97 VVTRVHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGV  174 (225)
Q Consensus        97 ~lt~DH~~~~~~e~~ri~~~g~~~~~~~--r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~  174 (225)
                      +||.||++.+     ++...|. +.+..  ..+....++|++|+       ....|++..+++.++| +|||||||||++
T Consensus       128 ~lt~dh~~~~-----~~~~~G~-i~~~~~~~~~~~~~~tr~lg~-------~~~~p~~~~~~l~~~d-~lvl~SDGl~d~  193 (237)
T 1txo_A          128 QITKDDTFVQ-----TLVDEGR-ITPEEAHSHPQRSLIMRALTG-------HEVEPTLTMREARAGD-RYLLCSDGLSDP  193 (237)
T ss_dssp             ECSCCCBHHH-----HHHHTTS-SCTTGGGGCTTTTCBCCCBSS-------SCCCCEEEEEECCTTC-EEEEECHHHHTT
T ss_pred             EeCCCCCHHH-----HHHHcCC-CCHHHHhhCccccceeeccCC-------CCccceEEEEecCCCC-EEEEECCCCCCC
Confidence            9999999843     3444442 22211  11223468999985       3478999999999887 579999999999


Q ss_pred             cChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          175 FGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       175 l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ++++|+.+++..     .+++.+|+.|++.|+ .+++.||+||||+++.+
T Consensus       194 l~~~~i~~~~~~-----~~~~~~a~~L~~~a~-~~g~~DniTvivv~~~~  237 (237)
T 1txo_A          194 VSDETILEALQI-----PEVAESAHRLIELAL-RGGGPDNVTVVVADLEH  237 (237)
T ss_dssp             SCHHHHHHHHTS-----SSHHHHHHHHHHHHH-HTTCCSCEEEEEEEEEC
T ss_pred             CCHHHHHHHHhc-----CCHHHHHHHHHHHHH-HcCCCCCeEEEEEEeeC
Confidence            999999988742     489999999999997 78999999999999864


No 15 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00  E-value=1.9e-32  Score=226.26  Aligned_cols=174  Identities=17%  Similarity=0.289  Sum_probs=143.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCC-CCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEe
Q 027290           19 VKAAKKAILDGFRKTDESLLQESVSG-GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIV   97 (225)
Q Consensus        19 ~~~~~~~l~~a~~~~~~~l~~~~~~~-~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (225)
                      +..+.+.|.++|..+|+.+.+..... ...+|||++++++.+++++++|+||||+|+++++               ++.+
T Consensus        72 ~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g---------------~~~~  136 (250)
T 2pk0_A           72 LSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQG---------------EYHL  136 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------------EEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCC---------------cEEE
Confidence            67788999999999999998876433 3458999999999999999999999999999988               9999


Q ss_pred             cCCCCCCCCHHHHHHHHHcCCEEeeC-CcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccC
Q 027290           98 VTRVHKAIYPQERARIQKSGGTVSSN-GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFG  176 (225)
Q Consensus        98 lt~DH~~~~~~e~~ri~~~g~~~~~~-~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~  176 (225)
                      ||.||++.++     +.+.|+..... ...++.+.++|++|+..      .+.|++..+++.++| +||||||||||+++
T Consensus       137 lt~dh~~~~~-----~~~~g~i~~~~~~~~~~~~~ltralG~~~------~~~p~~~~~~l~~gd-~lll~SDGl~d~l~  204 (250)
T 2pk0_A          137 LTSDHSLVNE-----LVKAGQLTEEEAASHPQKNIITQSIGQAN------PVEPDLGVHLLEEGD-YLVVNSDGLTNMLS  204 (250)
T ss_dssp             CCCCCBHHHH-----HHHTTSSCHHHHHTCCSCCCBSCCBSCSS------CCCCEEEEEECCTTC-EEEEECHHHHTTSC
T ss_pred             eCCCCCHHHH-----HHHcCCCCHHHHHhCCCcceEEeecCCCC------CccceEEEEEcCCCC-EEEEECCCCCCCcC
Confidence            9999998543     33334222111 12345578999999753      468999999999876 79999999999999


Q ss_pred             hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          177 PSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       177 ~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ++|+.+++..    ..+++.+|+.|++.|+ .+++.||+||||+++..
T Consensus       205 ~~~i~~~~~~----~~~~~~~a~~L~~~a~-~~g~~DniTvivv~~~~  247 (250)
T 2pk0_A          205 NADIATVLTQ----EKTLDDKNQDLITLAN-HRGGLDNITVALVYVES  247 (250)
T ss_dssp             HHHHHHHHTS----SSCHHHHHHHHHHHHH-HTTCCSCEEEEEEEECC
T ss_pred             HHHHHHHHhc----CCCHHHHHHHHHHHHH-HcCCCCCeEEEEEEeeC
Confidence            9998887653    3589999999999997 78999999999999864


No 16 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.98  E-value=1.1e-31  Score=220.36  Aligned_cols=169  Identities=20%  Similarity=0.258  Sum_probs=134.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCC--CCCCCceeEEEEEe--CCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeE
Q 027290           21 AAKKAILDGFRKTDESLLQESVSG--GWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAI   96 (225)
Q Consensus        21 ~~~~~l~~a~~~~~~~l~~~~~~~--~~~~GtT~~~~~i~--~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~   96 (225)
                      .+.++|.++|..+|+.+.+.....  ...+|||++++++.  +++++++|+||||+|+++++               ++.
T Consensus        67 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~---------------~~~  131 (240)
T 2j82_A           67 DPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKD---------------QLQ  131 (240)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETT---------------EEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCC---------------EEE
Confidence            567889999999999998876443  23479999999999  99999999999999999988               999


Q ss_pred             ecCCCCCCCCHHHHHHHHHcCCEEeeC-CcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCccccc
Q 027290           97 VVTRVHKAIYPQERARIQKSGGTVSSN-GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVF  175 (225)
Q Consensus        97 ~lt~DH~~~~~~e~~ri~~~g~~~~~~-~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l  175 (225)
                      +||.||++.++.     .+.|+..... .+.++...++|++|+.      ....|++..+++.++| +|||||||||+++
T Consensus       132 ~lt~dh~~~~~~-----~~~g~i~~~~~~~~~~~~~ltralG~~------~~~~p~~~~~~l~~gd-~lll~SDGl~d~l  199 (240)
T 2j82_A          132 QITSDHTWIAQA-----VQLGSLTIEQARQHPWRHVLSQCLGRE------DLSQIDIQPIDLEPGD-RLLLCSDGLTEEL  199 (240)
T ss_dssp             ECSCCCBHHHHC---------------------CCCBSCCBSCT------TCCCCEEEEEECCTTC-EEEEECHHHHTTS
T ss_pred             EECCCCcHHHHH-----HHcCCCCHHHHhcCCCcCeEeecCCCC------CceeEEEEEEeeCCCC-EEEEECCCCCCCC
Confidence            999999985432     2333222111 1234556899999974      3568999999999987 6999999999999


Q ss_pred             ChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 027290          176 GPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF  222 (225)
Q Consensus       176 ~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~  222 (225)
                      +++++.+++.     ..+++.+|+.|++.|+ .+++.||+|+||+++
T Consensus       200 ~~~~i~~~l~-----~~~~~~~a~~l~~~a~-~~g~~DniTvivv~~  240 (240)
T 2j82_A          200 TDDVISIYLS-----EPNVQKAAAALVDAAK-THGGRDNVTVVVISV  240 (240)
T ss_dssp             CHHHHHHHHT-----CSSHHHHHHHHHHHHH-HTTCCSCEEEEEEEC
T ss_pred             CHHHHHHHHc-----cCCHHHHHHHHHHHHH-HcCCCCCeEEEEEeC
Confidence            9999988875     3589999999999997 788999999999975


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.97  E-value=4e-31  Score=216.24  Aligned_cols=167  Identities=20%  Similarity=0.253  Sum_probs=137.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCCCceeEEEEEeCCe---EEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecC
Q 027290           23 KKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRT---VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVT   99 (225)
Q Consensus        23 ~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~~~~---l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt   99 (225)
                      .+.|.++|..+|+.+.+........+|||++++++.+++   ++++|+||||+|+++++               ++.++|
T Consensus        63 ~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g---------------~~~~lt  127 (234)
T 2jfr_A           63 RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDG---------------HMEQLT  127 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETT---------------EEEECS
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECC---------------EEEEeC
Confidence            678899999999999887654433489999999999998   99999999999999988               999999


Q ss_pred             CCCCCCCHHHHHHHHHcCCEEeeC-CcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccChH
Q 027290          100 RVHKAIYPQERARIQKSGGTVSSN-GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPS  178 (225)
Q Consensus       100 ~DH~~~~~~e~~ri~~~g~~~~~~-~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~~  178 (225)
                      .||++.+     ++.+.|...... ...++.+.++|++|+.      ....|++..+++.++| +|||||||||++++++
T Consensus       128 ~dh~~~~-----~~~~~g~i~~~~~~~~~~~~~~tralG~~------~~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~  195 (234)
T 2jfr_A          128 DDHSVAG-----ELVRMGEITRHEARWHPQRHLLTRALGIG------PHIGPDVFGIDCGPGD-RLLISSDGLFAAADEA  195 (234)
T ss_dssp             CCCBHHH-----HHHHTTSSCHHHHTTCTTTTCBSCCBSSS------SCCCCEEEECCCCTTC-EEEEECGGGGTTSCHH
T ss_pred             CCCCHHH-----HHHHcCCCCHHHHhcCcccceeeecCcCC------CCceeEEEEEecCCCC-EEEEECCCCccccCHH
Confidence            9999843     334444322111 1234556899999974      3468999999998876 6899999999999999


Q ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 027290          179 DAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF  222 (225)
Q Consensus       179 ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~  222 (225)
                      ++.+++ .    ..+++.+|+.|++.|+ .+++.||+|+||+++
T Consensus       196 ~i~~~~-~----~~~~~~~a~~l~~~a~-~~g~~DniTvivv~~  233 (234)
T 2jfr_A          196 LIVDAA-T----SPDPQVAVRRLVEVAN-DAGGSDNTTVVVIDL  233 (234)
T ss_dssp             HHHHHH-T----CSSHHHHHHHHHHHHH-HTTCCSCEEEEEEEE
T ss_pred             HHHHHH-c----cCCHHHHHHHHHHHHH-HcCCCCCeEEEEEEe
Confidence            998887 3    3589999999999997 789999999999987


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.97  E-value=4.1e-31  Score=213.66  Aligned_cols=157  Identities=13%  Similarity=0.137  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHHHhhhcC--CCCCCCceeEEEEEe--CCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecCCCC
Q 027290           27 LDGFRKTDESLLQESVS--GGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVH  102 (225)
Q Consensus        27 ~~a~~~~~~~l~~~~~~--~~~~~GtT~~~~~i~--~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH  102 (225)
                      .+++..+|+.+.+....  ....+|||++++++.  ++++|++|+||||+|++|++               ++.+||.||
T Consensus        47 ~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~~anvGDSr~yl~r~g---------------~~~~lt~dh  111 (211)
T 3rnr_A           47 LDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEWASVGDCRVYLFKGG---------------RLSRLSLDH  111 (211)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEEEEEESSCEEEEEETT---------------EEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEEEEEEccCeEEEEeCC---------------EEEEECCCc
Confidence            46777778887776533  234589999999999  99999999999999999999               999999999


Q ss_pred             CCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCCCcccCCce--EEEEecCCCeEEEEecCCcccccChHHH
Q 027290          103 KAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDI--HSFEVTERDHFIILGCDGLWGVFGPSDA  180 (225)
Q Consensus       103 ~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~~v~~~p~i--~~~~l~~~d~~lil~SDGl~d~l~~~ei  180 (225)
                      ++.++     +.+.|.  .+ ...+....++|++|...      ...|++  ..+++.++| +|||||||||++++++++
T Consensus       112 ~~~~~-----~~~~g~--~~-~~~~~~~~ltralG~~~------~~~~~~~~~~~~l~~gd-~llL~SDGl~d~~~~~~i  176 (211)
T 3rnr_A          112 NVSSE-----MVLLGR--GP-VPGPAGEMITSFIGIEN------LTEISTSEAPLPLEAGE-GVLVVSDGVYRSLHEDRI  176 (211)
T ss_dssp             BHHHH-----HHHTTS--CC-CCSHHHHCBSCCBTCSS------CCCCEECSSCEECCTTC-EEEEEEC-----CCTTEE
T ss_pred             HHHHH-----HHHcCC--Ch-hhCCCccEEecccCCCC------CcceeEecceecCCCCC-EEEEEcCCCCCCcCHHHH
Confidence            98543     444454  32 33344457899999642      356788  778888887 678999999999999998


Q ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHhCC--CCCCcEEEEEEe
Q 027290          181 VEFVQKLLKEGLSVTAVSRRLVREAVLERR--CKDNCTAIVIIF  222 (225)
Q Consensus       181 ~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~--~~DNiTvivi~~  222 (225)
                      .+++...    .+    |+.|++.|. .++  +.||+|||||+|
T Consensus       177 ~~~l~~~----~~----a~~L~~~a~-~~g~~~~DNiTvivv~L  211 (211)
T 3rnr_A          177 AMALSRG----SD----ARGILQEVE-AQGRPYQDNATLALVIL  211 (211)
T ss_dssp             EEEECTT----SC----HHHHHHHHH-HSCTTSCSSCEEEEEEC
T ss_pred             HHHHhcC----Ch----HHHHHHHHH-HcCCCCCCceEEEEEeC
Confidence            8776432    12    899999996 788  999999999986


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.72  E-value=1.2e-16  Score=130.82  Aligned_cols=140  Identities=14%  Similarity=0.121  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHhhhcCCCCCCCceeEEEEEe--CCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecCCCCCC
Q 027290           27 LDGFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA  104 (225)
Q Consensus        27 ~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH~~  104 (225)
                      .+++..+|+.+....   ...+++|++++++.  .++++++|+||||+|+++++               ++.+++.++.|
T Consensus        73 ~~~l~~~n~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------------~~~~l~~~~~~  134 (242)
T 3t91_A           73 KIAIKTINSILSLRT---TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGD---------------QVMKVQASNLP  134 (242)
T ss_dssp             HHHHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETT---------------EEEECCCC---
T ss_pred             HHHHHHHHHHHHhcC---CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECC---------------EEEEecCCCce
Confidence            345566666665432   22468999999986  68999999999999999988               88888655433


Q ss_pred             CCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccC-----hHH
Q 027290          105 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFG-----PSD  179 (225)
Q Consensus       105 ~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~-----~~e  179 (225)
                                                     +|-.      -...++...+.+.++| .|+|||||||+.++     ...
T Consensus       135 -------------------------------lG~~------~~~~~~~~~~~l~~GD-~lll~SDGl~e~~~~~~~~~~~  176 (242)
T 3t91_A          135 -------------------------------IGII------NEFDVEVVSEQLKAGD-LLIMMSDGIFEGPKHVENHDLW  176 (242)
T ss_dssp             ---------------------------------CC------CTTCEEEEEEECCTTC-EEEEECHHHHTCSTTCSCHHHH
T ss_pred             -------------------------------eEec------CCCcceEEEEEeCCCC-EEEEECCCcccCCCcccchHHH
Confidence                                           2310      1133456677888887 58899999999998     344


Q ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCC--CCCcEEEEEEecC
Q 027290          180 AVEFVQKLLKEGLSVTAVSRRLVREAVLERRC--KDNCTAIVIIFRH  224 (225)
Q Consensus       180 i~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~--~DNiTvivi~~~~  224 (225)
                      +.+++...  ...+++++++.|++.+....+.  .||+|++++++.+
T Consensus       177 ~~~ll~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~  221 (242)
T 3t91_A          177 MKRKMKGL--KTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDH  221 (242)
T ss_dssp             HHHHHHTC--CCCCHHHHHHHHHHHHHHHTTSCCCSCEEEEEEEEEE
T ss_pred             HHHHHHHh--cCCCHHHHHHHHHHHHHHHcCCCCCCceEEEEEEEec
Confidence            44443321  3468999999999998643334  6999999999863


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.67  E-value=2.4e-15  Score=123.41  Aligned_cols=138  Identities=17%  Similarity=0.181  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHhhhcCCCCCCCceeEEEEEe--CCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecCCCCCC
Q 027290           27 LDGFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA  104 (225)
Q Consensus        27 ~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH~~  104 (225)
                      .+++..+|+.+....   ...+++|+++++++  .++++++|+||+++|+++++               ++.+++.+|.+
T Consensus        76 ~~~l~~~n~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------------~~~~l~~~~~~  137 (242)
T 3pu9_A           76 GAAARAAHDFLYAMR---DGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNG---------------EFEQISESGGR  137 (242)
T ss_dssp             HHHHHHHHHHHHHHT---TTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETT---------------EEEEECCCCCC
T ss_pred             HHHHHHHHHHHHhcc---CCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECC---------------EEEEeCCCCcc
Confidence            355667777765543   22467999999886  67999999999999999988               89999887654


Q ss_pred             CCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccCh-------
Q 027290          105 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGP-------  177 (225)
Q Consensus       105 ~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~-------  177 (225)
                                                     +|-.      -...++...+.+.++| .|+||||||++..+.       
T Consensus       138 -------------------------------lG~~------~~~~~~~~~~~l~~Gd-~lll~TDGl~e~~~~~~~~~g~  179 (242)
T 3pu9_A          138 -------------------------------IGIY------RHTRPRVLEFPAEPGL-TVILVSDGIIGAGGRRGQPLEF  179 (242)
T ss_dssp             -------------------------------BSSC------TTCCCEEEEEECCTTC-EEEEECHHHHTTTTTTTCCCCH
T ss_pred             -------------------------------cccc------CCCCceEEEEEeCCCC-EEEEECcCcccCCCCccccccH
Confidence                                           3311      1134556778888887 688999999987654       


Q ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCC---CCCCcEEEEEEecC
Q 027290          178 SDAVEFVQKLLKEGLSVTAVSRRLVREAVLERR---CKDNCTAIVIIFRH  224 (225)
Q Consensus       178 ~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~---~~DNiTvivi~~~~  224 (225)
                      +++..++ .  ....+++++++.|++.+. .++   ..||+|++++++.+
T Consensus       180 ~~l~~l~-~--~~~~~~~~~~~~l~~~~~-~~~~~~~~DDiTvlvv~~~~  225 (242)
T 3pu9_A          180 LATGGRV-A--GPETPAQAIADELLEAAL-VADDGRAGDDMTVVVLRLRN  225 (242)
T ss_dssp             HHHHHHH-C--CTTCCHHHHHHHHHHHHH-HHTTTSCSSCEEEEEEEEEE
T ss_pred             HHHHHHH-h--ccCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEEEEec
Confidence            5553221 1  134589999999999986 343   58999999999864


No 21 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.54  E-value=4.1e-14  Score=116.68  Aligned_cols=137  Identities=15%  Similarity=0.022  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCCCceeEEEEEe--CCeEEEEEccc-CcEEEEeeccCCCCCCCCccccceeeEecCCCC
Q 027290           26 ILDGFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGD-AKAVVARSSIVDGSNNHLDELSSLKAIVVTRVH  102 (225)
Q Consensus        26 l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGD-Sr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH  102 (225)
                      ..+++..+|+.+.+.    ...+++|+++++++  .++++++|+|+ ++.|+++++               .+.+++.+|
T Consensus       108 p~~~l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g---------------~~~~l~~~~  168 (255)
T 3f79_A          108 PSEVLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG---------------QAGYLEGRG  168 (255)
T ss_dssp             HHHHHHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC-----------------CEEECCC--
T ss_pred             HHHHHHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCC---------------eEEEeCCCC
Confidence            445667777777642    23579999999995  67999999999 568999888               888888776


Q ss_pred             CCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccChHH---
Q 027290          103 KAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSD---  179 (225)
Q Consensus       103 ~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~~e---  179 (225)
                      .|                               +|-.      -...++...+.+.++| .|+||||||++.++.++   
T Consensus       169 ~~-------------------------------lG~~------~~~~~~~~~~~l~~gd-~lll~TDGl~e~~~~~~~~~  210 (255)
T 3f79_A          169 LP-------------------------------VGLF------DDATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKE  210 (255)
T ss_dssp             ----------------------------------CCS------SCCCCCC---BCCSSE-EEEEECSCCCCCSCC---CC
T ss_pred             ce-------------------------------EEEc------CCCceEEEEEEECCCC-EEEEECCCcCcccCCCcchh
Confidence            54                               2311      0123345566777776 68899999999998877   


Q ss_pred             ----HHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          180 ----AVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       180 ----i~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                          +.+++...   ..+++.+++.|. .+ ...+..||+|+++++.+-
T Consensus       211 g~~~l~~~l~~~---~~~~~~~~~~l~-~~-~~~~~~DDiTvl~v~~~~  254 (255)
T 3f79_A          211 KEASLPEQVAAA---GGTLDGLRQVFG-LA-NLAEMPDDIALLVLSRNL  254 (255)
T ss_dssp             TTTSSHHHHHHH---SCSSHHHHHHC-------CCSSSCEEEEEEEEC-
T ss_pred             hHHHHHHHHHhc---CCCHHHHHHHHH-hc-cCCCCCCCEEEEEEEecc
Confidence                77776553   236788888887 44 367889999999998753


No 22 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.47  E-value=6.9e-13  Score=105.12  Aligned_cols=124  Identities=17%  Similarity=0.112  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHhhhcCCCCCCCceeEEEEEe--CCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEecCCCCCCCC
Q 027290           29 GFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIY  106 (225)
Q Consensus        29 a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH~~~~  106 (225)
                      .+..+|+.+..       ..|+|++++.++  .+++.++|+|+++.|+++++               .+.++...+    
T Consensus        68 il~~ln~~l~~-------~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~---------------~~~~l~~~~----  121 (193)
T 3zt9_A           68 IFQLCHRELRG-------TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAK---------------GIITPLATP----  121 (193)
T ss_dssp             HHHHHHHHHTT-------SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETT---------------EEECCCCBC----
T ss_pred             HHHHHHHHHhc-------cCceEEEEEEEECCCCEEEEEecCCceEEEEcCC---------------cEEEecCCC----
Confidence            34555655532       247888888887  56999999999999999987               555443211    


Q ss_pred             HHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccChHHHHHHHHH
Q 027290          107 PQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK  186 (225)
Q Consensus       107 ~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~~ei~~~i~~  186 (225)
                                                 ..+|..      ....++...+++.++| .|+|+||||++.++.+++..++  
T Consensus       122 ---------------------------g~lG~~------~~~~~~~~~~~l~~gd-~l~l~sDGl~e~~~~~~~~~~~--  165 (193)
T 3zt9_A          122 ---------------------------GILGYN------YPHQLLIAKGSYQEGD-LFLIHSDGIQEGAVPLALLANY--  165 (193)
T ss_dssp             ---------------------------CBBTTB------CCSSCCCEEEECCTTC-EEEEECTTSCTTCSCGGGGGCT--
T ss_pred             ---------------------------Cceecc------CCccceeEEeccCCCC-EEEEECCCCCCccChhhhhchh--
Confidence                                       113311      0124556778888887 6889999999999998875542  


Q ss_pred             HHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 027290          187 LLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVII  221 (225)
Q Consensus       187 ~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~  221 (225)
                          ..+|+++|+.|++.+   .+..||+|++|++
T Consensus       166 ----~~~~~~~a~~l~~~~---~~~~Dd~tvlv~r  193 (193)
T 3zt9_A          166 ----RLTAEELVRLIGEKY---GRRDDDVAVIVAR  193 (193)
T ss_dssp             ----TSCHHHHHHHHHHHH---CCTTSCEEEEEEC
T ss_pred             ----cCCHHHHHHHHHHHh---CcCCCCeEEEEEC
Confidence                248999999999996   3479999999975


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=98.99  E-value=2.2e-08  Score=87.60  Aligned_cols=124  Identities=13%  Similarity=0.115  Sum_probs=81.6

Q ss_pred             CCCceeEEEEEe--CCeEEEEEcccCcEEEEee-ccCCCCCCCCccccceeeEecCCCCCCCCHHHHHHHHHcCCEEeeC
Q 027290           47 QDGATAVCIWIL--GRTVFVANIGDAKAVVARS-SIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSN  123 (225)
Q Consensus        47 ~~GtT~~~~~i~--~~~l~~anvGDSr~~l~~~-~~~~~~~~~~~~~~~~~~~~lt~DH~~~~~~e~~ri~~~g~~~~~~  123 (225)
                      ..++|++++.++  .+++.++|+|..+.|+++. +               .+..+..++.+                   
T Consensus       117 ~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g---------------~~~~l~~~~~~-------------------  162 (399)
T 3ke6_A          117 SKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADA---------------SARYVEPTGAG-------------------  162 (399)
T ss_dssp             CTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTS---------------CEEECCCCSCC-------------------
T ss_pred             CcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCC---------------CEEEeecCCCc-------------------
Confidence            468899888885  5799999999999999984 4               56666654422                   


Q ss_pred             CcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccCh------HHHHHHHHHHHhc-------
Q 027290          124 GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGP------SDAVEFVQKLLKE-------  190 (225)
Q Consensus       124 ~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~------~ei~~~i~~~~~~-------  190 (225)
                                 .+|-        ....+...+.+.++| .|+|+||||++....      +.+.+++......       
T Consensus       163 -----------plG~--------~~~~~~~~~~l~~Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~  222 (399)
T 3ke6_A          163 -----------PLGS--------GTGFPVRSEVLNIGD-AILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLD  222 (399)
T ss_dssp             -----------CTTS--------SCCCCCEEEECCTTC-EEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC--------
T ss_pred             -----------ceEC--------CCCceeEEEEECCCC-EEEEECCCcccCCCCCcchhHHHHHHHHHHhhccccccccc
Confidence                       2331        112335667888887 688999999999765      3455555442211       


Q ss_pred             --CCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          191 --GLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       191 --~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                        ...++.+++.+++......+..||+|+++++++.
T Consensus       223 ~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~  258 (399)
T 3ke6_A          223 APARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRA  258 (399)
T ss_dssp             --CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECC
T ss_pred             ChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeC
Confidence              1223445555554433224678999999999863


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.11  E-value=2.9e-05  Score=67.21  Aligned_cols=134  Identities=15%  Similarity=0.037  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHhhhcCCCCCCCceeEEEEEe--CCeEEEEEcccCc-EEEEeeccCCCCCCCCccccceeeEecCCCCCCC
Q 027290           29 GFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAK-AVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI  105 (225)
Q Consensus        29 a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGDSr-~~l~~~~~~~~~~~~~~~~~~~~~~~lt~DH~~~  105 (225)
                      .+..+|+.+...    ......|++++.++  .+++.++|.|-.. .++.+++               .+..+.....| 
T Consensus       250 ~l~~ln~~l~~~----~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g---------------~~~~l~~~~~p-  309 (394)
T 3eq2_A          250 VLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG---------------QAGYLEGRGLP-  309 (394)
T ss_dssp             HHHHHHHHHHHT----TCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETT---------------EEEECCCC--C-
T ss_pred             HHHHHHHHHhcc----CcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCC---------------ceEecCCCCce-
Confidence            344555555432    22356888888876  5689999999855 5666666               66666533222 


Q ss_pred             CHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCCCcccCCceEEEEecCCCeEEEEecCCcccccCh-------H
Q 027290          106 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGP-------S  178 (225)
Q Consensus       106 ~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~~v~~~p~i~~~~l~~~d~~lil~SDGl~d~l~~-------~  178 (225)
                                                    +|-..      ........+.+.++| .|+|.|||+.+....       +
T Consensus       310 ------------------------------lG~~~------~~~~~~~~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~~  352 (394)
T 3eq2_A          310 ------------------------------VGLFD------DATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEA  352 (394)
T ss_dssp             ------------------------------CSCCC------CC--CCEEEECCSSC-EEEECSSCCCC-----CCSTTTT
T ss_pred             ------------------------------eEecC------CCceEEEEEEeCCCC-EEEEECCCcccccCcccchhhHH
Confidence                                          23110      112234567788877 689999999998543       2


Q ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          179 DAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       179 ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      .+.+.+..   ....++.+++.+...  ......||+|+++++.+.
T Consensus       353 ~l~~~l~~---~~~~~~~l~~~~~~~--~~~~~~DDit~l~i~~~~  393 (394)
T 3eq2_A          353 SLPEQVAA---AGGTLDGLRQVFGLA--NLAEMPDDIALLVLSRNL  393 (394)
T ss_dssp             TSHHHHHT---TC--CHHHHHHHSCC--CSCC--CCCEEEEEC---
T ss_pred             HHHHHHHh---cchhHHHHHHHhccc--CCCCCCCceEEEEEeccc
Confidence            33344332   112233333322210  112357999999998753


No 25 
>1hq0_A CNF1, cytotoxic necrotizing factor 1; beta sandwich, RHO deamidase, RHO transglutaminase, toxin; 1.83A {Escherichia coli} SCOP: d.194.1.1 PDB: 1hzg_A
Probab=43.55  E-value=21  Score=29.15  Aligned_cols=25  Identities=16%  Similarity=0.276  Sum_probs=20.3

Q ss_pred             CCCCCceeEEEEEeCCeEEEEEcccC
Q 027290           45 GWQDGATAVCIWILGRTVFVANIGDA   70 (225)
Q Consensus        45 ~~~~GtT~~~~~i~~~~l~~anvGDS   70 (225)
                      +..+|||.+++ ++++.+|..|+|-+
T Consensus       142 G~LSGCT~v~A-~K~~~ly~~HtGk~  166 (295)
T 1hq0_A          142 GNLSGCTTIVA-RKEGYIYKVHTGTT  166 (295)
T ss_dssp             CCBSSCEEEEE-EETTEEEEEEEEES
T ss_pred             CcccCcEEEEE-EcCCeEEEEEcCCC
Confidence            34579998776 68999999999976


No 26 
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=42.74  E-value=65  Score=21.65  Aligned_cols=47  Identities=17%  Similarity=0.249  Sum_probs=36.8

Q ss_pred             CCCeEEEEecCCcccccChHHHHHHHHHHHhcC------------CCHHHHHHHHHHHH
Q 027290          159 ERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEG------------LSVTAVSRRLVREA  205 (225)
Q Consensus       159 ~~d~~lil~SDGl~d~l~~~ei~~~i~~~~~~~------------~~~~~~a~~L~~~a  205 (225)
                      +.|.|+||-++-==.+++.+|+..-+...+...            .+.++.|+.|++.+
T Consensus         8 q~D~yVvLEp~~~EqfLT~~Ell~~Lk~~L~~~~~~~LP~dL~~~~s~~~qaq~Lldt~   66 (94)
T 2krx_A            8 QQDNFVVLETNQPEQFLTTIELLEKLKGELEKISFSDLPLELQKLDSLPAQAQHLIDTS   66 (94)
T ss_dssp             CCCCEEEEESSSCSEEECHHHHHHHHHHHHHHSCTTTSCHHHHHCCCHHHHHHHHHHHC
T ss_pred             ccCCEEEecCCCCcccCCHHHHHHHHHHHHHhCccccCCHHHHhCCCHHHHHHHHHHhe
Confidence            456688888877677899999988888877643            45778889998876


No 27 
>4hg1_A Putative cytoplasmic protein; PSI-biology, MCSG, midwest center for structural genomics; HET: MLY MSE MLZ PG4; 1.75A {Salmonella enterica subsp} PDB: 4hg1_C* 4hg1_B*
Probab=23.55  E-value=60  Score=24.54  Aligned_cols=18  Identities=11%  Similarity=0.296  Sum_probs=14.7

Q ss_pred             eEEEEEcccCcEEEEeec
Q 027290           61 TVFVANIGDAKAVVARSS   78 (225)
Q Consensus        61 ~l~~anvGDSr~~l~~~~   78 (225)
                      -+-|+|+||-|+|++...
T Consensus       125 LirI~H~GDQ~i~IY~tE  142 (225)
T 4hg1_A          125 LIRIDHVGDQAIFIYITE  142 (225)
T ss_dssp             EEEECCSSSSEEEEEESC
T ss_pred             eEEeccCCCceEEEEEee
Confidence            457899999999998644


Done!