BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027291
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYD2|MND1_ARATH Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana
GN=MND1 PE=1 SV=1
Length = 230
Score = 351 bits (900), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/215 (77%), Positives = 190/215 (88%)
Query: 1 MSKKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPKKGVITQSVKDVVQSLVDDDLVL 60
MSKKRGLSLEEKR K+L+IFYESQDF+LLKELEK+GPKKGVI+QSVKDV+QSLVDDDLV
Sbjct: 1 MSKKRGLSLEEKREKMLQIFYESQDFFLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVA 60
Query: 61 KDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDERE 120
KDKIG S+YFWSLPSCAGNQLR+V +KLESDLQ S KR ELV+QC ALKKGREES+ER
Sbjct: 61 KDKIGISIYFWSLPSCAGNQLRSVRQKLESDLQGSNKRLAELVDQCEALKKGREESEERT 120
Query: 121 EALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIFTLQQWCS 180
EAL +LK +E KH +LK+EM Q+ADNDPA EA +NAIEVAH +ANRWTDNIFTL+QWCS
Sbjct: 121 EALTQLKDIEKKHKDLKNEMVQFADNDPATLEAKRNAIEVAHQSANRWTDNIFTLRQWCS 180
Query: 181 NNFPQAKEELEQMYKDVGIPEDFDYLELSPVPLSS 215
NNFPQAKE+LE +Y + GI EDFDY+ELS PLSS
Sbjct: 181 NNFPQAKEQLEHLYTEAGITEDFDYIELSSFPLSS 215
>sp|Q8K396|MND1_MOUSE Meiotic nuclear division protein 1 homolog OS=Mus musculus GN=Mnd1
PE=1 SV=1
Length = 205
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 135/208 (64%), Gaps = 4/208 (1%)
Query: 1 MSKKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPK-KGVITQSVKDVVQSLVDDDLV 59
MSKKRGLS EEKR +++EIF+E++D + LK+LEKL PK KG+ SVK+V+QSLVDD +V
Sbjct: 1 MSKKRGLSGEEKRTRMMEIFFETKDVFQLKDLEKLAPKEKGITAMSVKEVLQSLVDDGMV 60
Query: 60 LKDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDER 119
++IGTS Y+W+ PS A + + L S L ++H +L + + GR+E++ER
Sbjct: 61 DCERIGTSNYYWAFPSKALHARKRKLEALNSQLSEGSQKHADLQKSIEKARVGRQETEER 120
Query: 120 EEALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIFTLQQWC 179
+EL + + +LK E+ +Y + DP E ++ A +VA AANRWTDNIF ++ W
Sbjct: 121 AMLAKELSSFRDQRQQLKAEVEKYRECDPQVVEEIREANKVAKEAANRWTDNIFAIKSWA 180
Query: 180 SNNFPQAKEELEQMYKDVGIPEDFDYLE 207
F + +++ K+ GIPEDFDY++
Sbjct: 181 KRKFGFEESKID---KNFGIPEDFDYID 205
>sp|Q9BWT6|MND1_HUMAN Meiotic nuclear division protein 1 homolog OS=Homo sapiens GN=MND1
PE=1 SV=1
Length = 205
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 135/208 (64%), Gaps = 4/208 (1%)
Query: 1 MSKKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPK-KGVITQSVKDVVQSLVDDDLV 59
MSKK+GLS EEKR +++EIF E++D + LK+LEK+ PK KG+ SVK+V+QSLVDD +V
Sbjct: 1 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV 60
Query: 60 LKDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDER 119
++IGTS Y+W+ PS A + ++ LES L ++H L + K GR E++ER
Sbjct: 61 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER 120
Query: 120 EEALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIFTLQQWC 179
+EL ++ + +LK E+ +Y D DP E ++ A +VA AANRWTDNIF ++ W
Sbjct: 121 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWA 180
Query: 180 SNNFPQAKEELEQMYKDVGIPEDFDYLE 207
F + ++++ + GIPEDFDY++
Sbjct: 181 KRKFGFEENKIDRTF---GIPEDFDYID 205
>sp|Q32L19|MND1_BOVIN Meiotic nuclear division protein 1 homolog OS=Bos taurus GN=MND1
PE=2 SV=1
Length = 205
Score = 170 bits (431), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 136/208 (65%), Gaps = 4/208 (1%)
Query: 1 MSKKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPK-KGVITQSVKDVVQSLVDDDLV 59
MSKK+GLS EEKR +++EIFYE++D + LK++EK+ PK KG+ T SVK+V+QSLVDD +V
Sbjct: 1 MSKKKGLSAEEKRTRMMEIFYETKDVFQLKDMEKIAPKEKGITTMSVKEVLQSLVDDGMV 60
Query: 60 LKDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDER 119
++IGTS Y+W+ PS A + + L+S L +++ L + K GR E++ER
Sbjct: 61 DCERIGTSNYYWAFPSKALHARKRKLEVLDSQLSEGNQKYANLQKSIEKAKVGRHETEER 120
Query: 120 EEALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIFTLQQWC 179
+EL ++ + +LK E+ +Y + DP E ++ A +VA AANRWTDNIF ++ W
Sbjct: 121 TMLAKELSSLRDQREQLKAEVEKYRECDPQVVEEIRQANQVAKEAANRWTDNIFAIKSWA 180
Query: 180 SNNFPQAKEELEQMYKDVGIPEDFDYLE 207
F + +++ K+ GIPEDFDY++
Sbjct: 181 KRKFGFEENKID---KNFGIPEDFDYID 205
>sp|Q5XGY9|MND1_XENLA Meiotic nuclear division protein 1 homolog OS=Xenopus laevis
GN=mnd1 PE=2 SV=1
Length = 205
Score = 170 bits (431), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Query: 1 MSKKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPK-KGVITQSVKDVVQSLVDDDLV 59
MSKKRGLS+EEKR +++EIF+E++D + LK+LEK+ PK KG+ + SVK+++QSLVDD +V
Sbjct: 1 MSKKRGLSVEEKRTRMMEIFFETKDVFQLKDLEKIAPKEKGITSMSVKEILQSLVDDGMV 60
Query: 60 LKDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDER 119
++IGTS YFW+ PS A + + LE+ K++ L + + K GR++++ER
Sbjct: 61 DSERIGTSNYFWAFPSKALHARKRKLETLEAQFTEVKQKKESLQQCVDKAKVGRQDTEER 120
Query: 120 EEALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIFTLQQWC 179
+ +EEL ++ + EL ++ +Y + DP E ++ + +VA A NRWTDNIF ++ W
Sbjct: 121 SKLVEELASLRHRKEELCADLEKYKECDPDVVEEIRQSNKVAKDAVNRWTDNIFAVKSWA 180
Query: 180 SNNFPQAKEELEQMYKDVGIPEDFDYLE 207
F E Q+ K+ GIPEDFDY++
Sbjct: 181 KKKFGF---EERQIDKNFGIPEDFDYID 205
>sp|Q6DC61|MND1_DANRE Meiotic nuclear division protein 1 homolog OS=Danio rerio GN=mnd1
PE=2 SV=1
Length = 220
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 117/174 (67%), Gaps = 1/174 (0%)
Query: 1 MSKKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPK-KGVITQSVKDVVQSLVDDDLV 59
MSKK+GLSLEEKR +++EIF+E++D + LK++EK+ PK KG+ SVK+V+QSLVDD++V
Sbjct: 1 MSKKKGLSLEEKRSRMMEIFFETKDVFQLKDIEKIAPKSKGITPMSVKEVLQSLVDDNMV 60
Query: 60 LKDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDER 119
+++GTS Y+W+ PS A + + +LE L+ +R L + + K GRE ++ER
Sbjct: 61 DTERVGTSNYYWAFPSKALHARKRRLEELEKQLEDGSQRKKALQQAVDKAKVGREVNEER 120
Query: 120 EEALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIF 173
E+ L+EL A++ + ++K E+ +Y + DPA E ++NA A A RWT F
Sbjct: 121 EDLLKELTALKGQRDQMKVEIEKYQECDPAVVEEIRNANIAAKEAVARWTGGTF 174
>sp|Q09739|MCP7_SCHPO Meiotic coiled-coil protein 7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp7 PE=1 SV=1
Length = 210
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 118/208 (56%), Gaps = 8/208 (3%)
Query: 5 RGLSLEEKRGKILEIFYESQDFYLLKELEKLGPKKGVITQSVKDVVQSLVDDDLVLKDKI 64
+GLSL EKR ++ IF++S+DF+ LKE+EKLG KK ++ Q+VKDV+QSLVDD++V +KI
Sbjct: 4 KGLSLAEKRRRLEAIFHDSKDFFQLKEVEKLGSKKQIVLQTVKDVLQSLVDDNIVKTEKI 63
Query: 65 GTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGRE----ESDERE 120
GTS Y+WS PS A +V L++ L K++ L E + K R+ E+D +
Sbjct: 64 GTSNYYWSFPSDAKRSRESVLGSLQAQLDDLKQKSKTLDENISFEKSKRDNEGTENDANQ 123
Query: 121 EALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIFTLQQWCS 180
LE L A E + LK ++ +P FE + AAN WTD I TL +C
Sbjct: 124 YTLELLHAKESELKLLKTQLSNLNHCNPETFELKNENTKKYMEAANLWTDQIHTLIAFCR 183
Query: 181 NNFPQAKEELEQMYKDVGIPEDFDYLEL 208
+ + Q+ + IPED D L+L
Sbjct: 184 D----MGADTNQIREYCSIPEDLDDLQL 207
>sp|Q54E86|MND1_DICDI Meiotic nuclear division protein 1 homolog OS=Dictyostelium
discoideum GN=mnd1 PE=3 SV=1
Length = 221
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 6/207 (2%)
Query: 2 SKKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPKKGVITQ-SVKDVVQSLVDDDLVL 60
++++G+S EEK+ K+ E F+ + Y K++E K +TQ K+ +Q L+DD +V
Sbjct: 3 TRRKGMSPEEKKEKLKEFFHSNSTIYSSKDVESEASKYTGMTQVQCKETLQMLIDDGVVN 62
Query: 61 KDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDERE 120
DK+G+S ++WS PS + ++ + L +K+R ++ LK R ES+ R
Sbjct: 63 TDKMGSSNFYWSFPSFEFDSKKDKIIEQTKLLSETKERIQSETKKIEQLKSERVESETRT 122
Query: 121 EALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANRWTDNIFTLQQWCS 180
+ LE+L+ ++ + K+E+ YAD+ + + K I++A AA NR+TDNI +L+Q+C
Sbjct: 123 KNLEKLQTLKDDNKSFKEELLLYADS--SLIDDKKRDIKIAIAAVNRYTDNISSLRQFCD 180
Query: 181 NNFPQAKEELEQMYKDVGIPEDFDYLE 207
+ + + + + GI D DYLE
Sbjct: 181 SKYNIRPSDFDTSF---GIKPDMDYLE 204
>sp|P53102|MND1_YEAST Meiotic nuclear division protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MND1 PE=1 SV=2
Length = 219
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 3 KKRGLSLEEKRGKILEIFYESQDFYLLKELEKLGPKK-GVITQSVKDVVQSLVDDDLVLK 61
K++ +SL+EK+ +IL F E+ FY +KELEK PKK G+ VKD+VQ ++D+D V+
Sbjct: 4 KRQTVSLQEKKNRILNFFQETYTFYNIKELEKSIPKKCGISPMIVKDLVQQMIDEDGVIS 63
Query: 62 -DKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCN----------ALK 110
+K G +W C NQ +KL + KK+ E+ +C+ L
Sbjct: 64 VEKCGNINIYW----CFKNQ---TLQKLYDSSELIKKKIQEV--KCDIATYKQELDKTLA 114
Query: 111 KGR-------EESDEREEALEELKAVELKHIELKDEMGQYADN---DPAAFEAMKNAIEV 160
GR ++S RE LE+ K ++ I+ K Q ++ D A + K I +
Sbjct: 115 TGRRKKFTVGQKSYNREALLEKRKKIQ-DEIKKKSNSLQKIESIRWDAAKIQENKQQIRL 173
Query: 161 AHAAANRWTDNIFTLQQWCSNNF---PQAKEELEQMYKDVGIPEDF 203
+ TDNI L + F P EQ+ K+ GIPE+F
Sbjct: 174 KKVHLEKTTDNIEILIDYLYKKFFLKP------EQIRKEFGIPEEF 213
>sp|Q6M0E9|RFCL_METMP Replication factor C large subunit OS=Methanococcus maripaludis
(strain S2 / LL) GN=rfcL PE=3 SV=1
Length = 486
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 145 DNDPAAFEAMKNAIEVAH-----AAANRWTDNIFTLQQWCSNNFPQAKEELEQMYKDVGI 199
D++ + F+AM+ ++ H +A ++I T+++W S N P KE L+ YKD+
Sbjct: 223 DSEKSIFDAMRIIMKTTHYDIATSATRDVKEDIGTIEEWISENLP--KEYLK--YKDLA- 277
Query: 200 PEDFDYLELSPVPLSSV 216
E +DYL S V L V
Sbjct: 278 -EGYDYLSKSDVFLGRV 293
>sp|O29417|PURA_ARCFU Adenylosuccinate synthetase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=purA PE=3 SV=1
Length = 337
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 65 GTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTEL--VEQC--NALKKGREESDERE 120
G S+Y+ + P + SD+ R ++ V +C + G ++ +
Sbjct: 179 GLSLYYGTYPYVTSKD--TTASAIASDVGVGPTRVDDVIVVFKCFPTRVGAGPFPTEMPQ 236
Query: 121 EALEELKAVELKHIELKDEMGQYADNDPAAFEAMKN-AIEVAHAAANRWTDNIFTLQQWC 179
E E+L VE + + Y D + A + AM N A +VA ++ + + +W
Sbjct: 237 EEAEKLGIVEYGTVTGRRRRIGYWDGEFARYSAMVNGATQVAITGVDKLDKECYGVTEW- 295
Query: 180 SNNFPQAKEELEQMYKDVGIP 200
P+AK+ +EQ+ +DV +P
Sbjct: 296 EKLTPKAKKFIEQVEEDVRVP 316
>sp|A4FZL6|RFCL_METM5 Replication factor C large subunit OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=rfcL PE=3 SV=1
Length = 484
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 145 DNDPAAFEAMKNAIEVAH-----AAANRWTDNIFTLQQWCSNNFPQAKEELEQMYKDVGI 199
D++ + F+AM+ ++ H +A +++ T+Q+W S N P KE L YKD+
Sbjct: 223 DSEKSIFDAMRIIMKTTHYDIATSATRDVKEDLGTIQEWISENLP--KEYLR--YKDLA- 277
Query: 200 PEDFDYLELSPVPLSSV 216
+DYL S V L V
Sbjct: 278 -GGYDYLSKSDVFLGRV 293
>sp|Q1LV19|SPKAP_DANRE A-kinase anchor protein SPHKAP OS=Danio rerio GN=sphkap PE=3 SV=1
Length = 1596
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 30 KELEKLGPKKGVITQSVKDVVQSLVDDDLVLKDKIGTSVYFWSLPSCAGNQLRNVYRKLE 89
KELE G I + D V +L+ D L + + + + ++ SC G + YR E
Sbjct: 624 KELEGPGKDAPNIEGFLSDCVNNLLFDVLCVTSRKISDISNCNMESCDGQEGSVGYRAYE 683
Query: 90 SDLQSSKKRHTE---LVEQCNALKKG-REESDEREEALEELKAVELKHIE 135
+D ++ ++ ++ L+E A G R S E+ AL + E KHI+
Sbjct: 684 ADSKAGREALSQLQHLIEPSQAYNHGERRSSVEKLSALIGKREREQKHIQ 733
>sp|A9A6N2|RFCL_METM6 Replication factor C large subunit OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=rfcL PE=3 SV=1
Length = 484
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 145 DNDPAAFEAMKNAIEVAH-----AAANRWTDNIFTLQQWCSNNFPQAKEELEQMYKDVGI 199
D++ + F+AM+ ++ H +A + + T+++W S N P KE L+ YKD+
Sbjct: 223 DSEKSIFDAMRIIMKTTHYDIATSATRDVKEELGTIEEWISENLP--KEYLK--YKDLA- 277
Query: 200 PEDFDYLELSPVPLSSV 216
+DYL S V L V
Sbjct: 278 -NGYDYLSKSDVFLGRV 293
>sp|Q6ZWR6|SYNE1_MOUSE Nesprin-1 OS=Mus musculus GN=Syne1 PE=1 SV=2
Length = 8799
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 44 QSVKDVVQSLVDDDLVLKDKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELV 103
Q+VKD+ +SL+ + K ++ ++ W+ Q + +E L S+K+HTEL
Sbjct: 3362 QAVKDMWESLLSAAIRCKSQLEGALSKWTSYQDDVRQFSSWMDSVEVSLTESEKQHTELR 3421
Query: 104 EQCNALKKGR 113
E+ AL K +
Sbjct: 3422 EKITALGKAK 3431
>sp|A6VIW1|RFCL_METM7 Replication factor C large subunit OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=rfcL PE=3 SV=1
Length = 482
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 145 DNDPAAFEAMKNAIEVAH-----AAANRWTDNIFTLQQWCSNNFPQAKEELEQMYKDVGI 199
D++ + F+AM+ ++ H +A + + T+++W S N P KE L+ YKD+
Sbjct: 223 DSEKSIFDAMRIIMKTTHYDIATSATRDVKEELGTIEEWISENLP--KEYLK--YKDLA- 277
Query: 200 PEDFDYLELSPVPLSSV 216
+DYL S V L V
Sbjct: 278 -NGYDYLSKSDVFLGRV 293
>sp|Q59189|PARE_BORBU DNA topoisomerase 4 subunit B OS=Borrelia burgdorferi (strain ATCC
35210 / B31 / CIP 102532 / DSM 4680) GN=parE PE=3 SV=2
Length = 599
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
Query: 113 REESDEREEALEELKAVELKHIELKDEMGQYADNDPAAFEAMKNAIEVAHAAANR----- 167
+E S R+EA E K + K +LKD + D+ + + M E A +
Sbjct: 357 KELSSVRKEARERAKKISFKIPKLKDCKFHFNDSSKQSEQTMIFLTEGDSATGSMVSCRD 416
Query: 168 -WTDNIFTLQQWCSNNFPQAK------EELEQMYKDVGIPEDFDYLELSPVPLSSVGD 218
+T IF+L+ N F + K EEL M +GI E + L + V +++ D
Sbjct: 417 VYTQAIFSLRGKPQNMFEKNKSEIYKNEELYNMMVALGIEESIENLRYNKVVIATDAD 474
>sp|Q66HR5|CACO1_RAT Calcium-binding and coiled-coil domain-containing protein 1
OS=Rattus norvegicus GN=Calcoco1 PE=2 SV=1
Length = 691
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 79 NQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDEREEALEELKAVELKHI-ELK 137
+LR+ ++LE+ L ++++ H+EL EQ L + E E + L + + + I EL+
Sbjct: 175 TELRSRVQELEAALATARQEHSELTEQYKGLSRSHGELSEERDILSQQQGEHVARILELE 234
Query: 138 DEMGQYAD 145
D++ +D
Sbjct: 235 DDIQTMSD 242
>sp|Q8CGU1|CACO1_MOUSE Calcium-binding and coiled-coil domain-containing protein 1 OS=Mus
musculus GN=Calcoco1 PE=1 SV=2
Length = 691
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 79 NQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDEREEALEELKAVELKHI-ELK 137
+LR+ ++LE+ L ++++ H+EL EQ L + E E + L + + + I EL+
Sbjct: 175 TELRSRVQELEAALATARQEHSELTEQYKGLSRSHGELSEERDILSQQQGDHVARILELE 234
Query: 138 DEMGQYAD 145
D++ +D
Sbjct: 235 DDIQTMSD 242
>sp|Q9UTA6|YL8C_SCHPO Uncharacterized hydrolase C25B8.12c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC25B8.12c PE=1 SV=1
Length = 303
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 120 EEALEELKAVELKHIEL------------KDEMGQYADNDPAAFEAMKNAIEVAHAAANR 167
EEA+E++K+ E+K I++ +D +G++ A +A++ IE+ + +N+
Sbjct: 157 EEAIEKVKSGEIKVIKMAVCEDPDKLDVVRDILGKFPREKFATTQALEFCIELIPSNSNK 216
Query: 168 WTDNIFTLQQWCSNNFPQAKEE 189
T LQ SN P+ K E
Sbjct: 217 GT----ALQYITSNILPEVKNE 234
>sp|Q9WV04|KIF9_MOUSE Kinesin-like protein KIF9 OS=Mus musculus GN=Kif9 PE=2 SV=2
Length = 790
Score = 30.4 bits (67), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 67 SVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALKKGREESDEREEALEEL 126
+V F + G+++ ++++ +S L KKR +E ++ NA+K +E DE ++AL
Sbjct: 578 TVAFEEFKNERGSEINRIFKENKSILNERKKRASETTQRINAIK---QEIDETKDALNFQ 634
Query: 127 KAVELKHIELKDEMGQY 143
K+ L+++ G+Y
Sbjct: 635 KS-------LREKQGEY 644
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,018,500
Number of Sequences: 539616
Number of extensions: 3608607
Number of successful extensions: 13578
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 13387
Number of HSP's gapped (non-prelim): 346
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)