BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027292
(225 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/225 (92%), Positives = 219/225 (97%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGGYGDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDHIPRWLEELR HAD
Sbjct: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNK+DLEEQRAVPTEDAKEFA+KEGLFFLETSALEATNVENAF+TVLTEIFN
Sbjct: 121 KNIVIILIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
IVNKKNL AGE Q NGNPASL+GK+I +PGPAQEIPAKS+MCC++
Sbjct: 181 IVNKKNLVAGEDQANGNPASLTGKRITIPGPAQEIPAKSNMCCKS 225
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/226 (91%), Positives = 219/226 (96%), Gaps = 1/226 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQ+FDHIPRWLEELRSHAD
Sbjct: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDLE+QRAVPTEDAKEFA+KEGLFFLETSALE+TNVENAFMTVLTEIF+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFS 180
Query: 181 IVNKKNLTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCRT 225
I+N+KNL AGE QGNGN ASL+ GKKI++PGPAQEIPAKS MCC T
Sbjct: 181 IMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCST 226
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/222 (92%), Positives = 215/222 (96%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDLE+QRAVPTEDAKEFAQKEGLFFLETSAL+ATNVENAFMTVLTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IVNKKNL AGE Q NGNPASLSGKKI++PGPAQEIPAKS C
Sbjct: 181 IVNKKNLVAGEDQINGNPASLSGKKIIIPGPAQEIPAKSKCC 222
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/224 (91%), Positives = 215/224 (95%), Gaps = 1/224 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELRSHAD
Sbjct: 61 IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDLE+QRAVPTED EFAQKEGLFFLETSAL+ATNVE+AFMT+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
IVNKKNL AGE Q NGNPASLSGKKI++PGPAQEIP+KS CCR
Sbjct: 181 IVNKKNLIAGENQSNGNPASLSGKKIIIPGPAQEIPSKSK-CCR 223
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/224 (91%), Positives = 213/224 (95%), Gaps = 1/224 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGG YGD NQK+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGSYGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDHIPRWLEELR+HAD
Sbjct: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDLE QR VPTEDAKEFA+KEGLFFLETSALEATNVE AFMTVLTEIFN
Sbjct: 121 KNIVIILIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
IVNKKNL AG+ QGNGN ASLSGK+I+VPG AQEIP K SMCC+
Sbjct: 181 IVNKKNLAAGDNQGNGNAASLSGKQIIVPGTAQEIP-KRSMCCQ 223
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/224 (89%), Positives = 211/224 (94%), Gaps = 1/224 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASG YGD NQK+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGRSYGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKS+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDHIPRWLEELR+HAD
Sbjct: 61 IQHKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDLE QR VPTEDAKEFA+KEGLFFLETSALEATNVE AFMTVLTEIFN
Sbjct: 121 KNIVIILIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
I+NKKNL A + QGN N ASLSGKKI+VPGPAQEIP K SMCC+
Sbjct: 181 IINKKNLAASDNQGNDNSASLSGKKIIVPGPAQEIP-KRSMCCQ 223
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/225 (86%), Positives = 214/225 (95%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD NQ+IDYVFKVVLIGDSAVGKSQILARF+RNEFSLDSK+TIGVEFQTRTLV
Sbjct: 1 MASGGGYGDANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIIL+GNKSDLE QR VPTEDAKEFA+KEGLFFLETSAL+ATNVE +FMTVLTEI+N
Sbjct: 121 KNIVIILVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
VNKKNL A E QGNGN ASL G+KI++PGPAQEIPAKS+MCC++
Sbjct: 181 TVNKKNLAADESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/224 (90%), Positives = 213/224 (95%), Gaps = 2/224 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MAS G YGD NQKIDYVFKVVLIGDSAVGKSQILARFARN+FS+DSKATIGVEFQTRTLV
Sbjct: 1 MASAG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLV 59
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I+HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++R SFDHIPRWLEELR+HAD
Sbjct: 60 IEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHAD 119
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDLEEQRAVPTEDAKEFA+KEGLFFLETSAL+ATNVE AFMTVLTEIFN
Sbjct: 120 KNIVIILIGNKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFN 179
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
IVNKKNL A E QGNGN ASLSGKKI+VPGPAQEIP K SMCC+
Sbjct: 180 IVNKKNLAADENQGNGNSASLSGKKIIVPGPAQEIP-KKSMCCQ 222
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/225 (86%), Positives = 214/225 (95%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD NQ+IDYVFKVVLIGDSAVGKSQILARF+ NEFSLDSK+TIGVEFQTRTLV
Sbjct: 1 MASGGGYGDANQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIIL+GNKSDLE QR VPTEDAKEFA+KEGLFFLETSAL+ATNVE +FMTVLTEI+N
Sbjct: 121 KNIVIILVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
IVNKKNL A E QGNGN ASL G+KI++PGPAQEIPAKS+MCC++
Sbjct: 181 IVNKKNLAADESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/221 (88%), Positives = 210/221 (95%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
GGYGD NQ+IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLVI HK
Sbjct: 1 GGYGDANQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHK 60
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HADKNIV
Sbjct: 61 TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIV 120
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
IIL GNK DLE QR VPTEDAKEFA+KEGLFFLETSALEATNVE AF+TVLTEI+NIVNK
Sbjct: 121 IILTGNKCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNK 180
Query: 185 KNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
KNLTA E QGNGN ASLSG+KI+VPGPAQEIPAK +MCC++
Sbjct: 181 KNLTADENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 221
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/224 (87%), Positives = 211/224 (94%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD N KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLV
Sbjct: 1 MASGGGYGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNK DL QR VPTEDAKEFA+KEGLFFLETSALEATNVE+AF TVLTEI+N
Sbjct: 121 KNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
IVNKK+L A E QGNGN ASLSG+KI++PGPAQEIPAK +MCC+
Sbjct: 181 IVNKKSLAADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQ 224
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/225 (85%), Positives = 213/225 (94%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA+ GGYGD NQ+IDYVFKVVLIGDSAVGKSQILARF+RNEFSLDSK+TIGVEFQTRTLV
Sbjct: 1 MANSGGYGDANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIIL+GNKSDLE QR VPTEDAKEFA+KEGLFFLETSAL+ATNVE +FMTVLTEI+N
Sbjct: 121 KNIVIILVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
I+NKKNL A E QGNGN ASL G+KI++PGP QE+PAKSSMCC++
Sbjct: 181 ILNKKNLAADESQGNGNSASLLGQKIVIPGPGQEVPAKSSMCCQS 225
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/222 (88%), Positives = 206/222 (92%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGGYGDQSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGA+LVYDI++RQ+FDHIPRWLEELRSHAD
Sbjct: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIIL+GNK DLE QR VPTEDAKEFAQKEGLFFLETSALE+TNVE AF+TVLTEIFN
Sbjct: 121 KNIVIILVGNKCDLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IVNKK L + Q NGNPASL GKKI+VPGPAQ IP KS C
Sbjct: 181 IVNKKTLAGADNQTNGNPASLGGKKIVVPGPAQVIPEKSKCC 222
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/222 (88%), Positives = 210/222 (94%), Gaps = 2/222 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASG YGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASG--YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 58
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHAD 118
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+NIVI+LIGNK+DLE+QRAVPTEDAKEFAQKEGLFFLETSA+EATNVE+AF+TVLTEIFN
Sbjct: 119 RNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFN 178
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IVNKKNL A E Q NGNPASL+GKKILVPGP Q IP K + C
Sbjct: 179 IVNKKNLAADENQSNGNPASLTGKKILVPGPGQVIPGKKACC 220
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/226 (86%), Positives = 210/226 (92%), Gaps = 1/226 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M SGGGYGDP+QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLV
Sbjct: 1 MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI+RRQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDL +QRA+PTEDAKEFA+KEGLFFLETSA ATNVE+AF TVLTEIFN
Sbjct: 121 KNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCCRT 225
IVNKK+L A E Q NGNP SL+GKKI +VPGP Q IP KS+MCC +
Sbjct: 181 IVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/222 (86%), Positives = 209/222 (94%), Gaps = 2/222 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASG YGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1 MASG--YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLA 58
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHAD 118
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+NIVI+LIGNK+DLE+QRAVPTEDAKEFAQKEGLFFLETSA+EATN+E+AF+TVLTEIFN
Sbjct: 119 RNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFN 178
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IVNKKNL A + Q NGNPASL+GKKILVPGP Q IP K + C
Sbjct: 179 IVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACC 220
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/226 (85%), Positives = 210/226 (92%), Gaps = 1/226 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M SGGGYGDP+QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLV
Sbjct: 1 MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI+RRQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDL +QRA+PTEDA+EFA+KEGLFFLETSA ATNVE+AF TVL+EIFN
Sbjct: 121 KNIVIILIGNKSDLVDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCCRT 225
IVNKK+L A E Q NGNP SL+GKKI +VPGP Q IP KS+MCC +
Sbjct: 181 IVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/215 (88%), Positives = 205/215 (95%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQ+IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLVI HK+VKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HADKNIVIIL GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DLE QR VPTEDAKEFA+KEGLFFLETSALEATNVE AF+TVLTEI+NIVNKKNLTA
Sbjct: 134 KCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E QGNGN ASLSG+KI+VPGPAQEIPAK +MCC++
Sbjct: 194 ENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 228
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/226 (83%), Positives = 211/226 (93%), Gaps = 1/226 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGDP+QKIDYVFK+VLIGDS VGKSQIL+R+ARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGGYGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD++RRQ+FDHIPRWLEELR++AD
Sbjct: 61 IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIIL+GNKSDLE+QRA+ EDAK+FA+KEGLFFLETSAL A NVE+AF TVLTEIFN
Sbjct: 121 KNIVIILVGNKSDLEDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCCRT 225
IVNKK+L AGEG+GNG+P SL+GKKI +VPGP Q IP K+ +CC T
Sbjct: 181 IVNKKSLVAGEGEGNGDPGSLAGKKIDIVPGPGQVIPTKNKLCCNT 226
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/222 (86%), Positives = 207/222 (93%), Gaps = 2/222 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASG YGD +QKIDYVFKVVLIGDSAVGK+QILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASG--YGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLV 58
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHAD 118
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+NIVI+L GNK+DLE+QRAVPTEDAKEFAQKEGLFFLETSA+EAT +E+AF+TVLTEIFN
Sbjct: 119 RNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFN 178
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IVNKKNL A E Q N NPASL+GKKILVPGP Q IP K + C
Sbjct: 179 IVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACC 220
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/215 (87%), Positives = 204/215 (94%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQ+IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLVI HK+VKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HADKNIVIIL GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DLE QR VPT DAKEFA+KEGLFFLETSALEATNVE AF+TVLTEI+NIVNKKNLTA
Sbjct: 134 KCDLENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E QGNGN ASLSG+KI+VPGPAQEIPAK +MCC++
Sbjct: 194 ENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 228
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/224 (83%), Positives = 205/224 (91%), Gaps = 3/224 (1%)
Query: 3 SGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 62
S GGYGDP+QKIDYVFK+VLIGDS VGKSQIL+R+ARNEFSLDSKATIGVEFQTRTLV+
Sbjct: 2 SSGGYGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMD 61
Query: 63 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKN 122
HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD++RRQ+FDHIPRWLEELR HADKN
Sbjct: 62 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKN 121
Query: 123 IVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
IVIIL+GNKSDLE+QRA+ TEDAKEFA+ EGLFFLETSAL A NVE AF TVLTEIFNIV
Sbjct: 122 IVIILVGNKSDLEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIV 181
Query: 183 NKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCCRT 225
NKKNL AGE GNG+P SL+GKKI +VPGPAQ +P KS MCC +
Sbjct: 182 NKKNLVAGE--GNGDPGSLAGKKIDIVPGPAQVVPTKSGMCCNS 223
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/188 (95%), Positives = 186/188 (98%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASGGGYGDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDHIPRWLEELR HAD
Sbjct: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNK+DLEEQRAVPTEDAKEFA+KEGLFFLETSALEATNVENAF+TVLTEIFN
Sbjct: 121 KNIVIILIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFN 180
Query: 181 IVNKKNLT 188
IVNKKNL+
Sbjct: 181 IVNKKNLS 188
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/214 (80%), Positives = 199/214 (92%), Gaps = 1/214 (0%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL I+ KS+KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGAVGAMLVYD+++R++F+HIPRWLEELR+HADKNIVIILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DLE+QRAVPTEDAKEFA+KEGLFFLETSAL ATNVEN+F T++TEI+N VNKKNL + E
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVEN 192
Query: 193 QGNG-NPASLSGKKILVPGPAQEIPAKSSMCCRT 225
QG+ NP SL+GKKI++PG Q+IPAK+S CC +
Sbjct: 193 QGDSNNPGSLAGKKIVIPGSGQDIPAKTSTCCSS 226
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/215 (80%), Positives = 193/215 (89%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D N KIDYVFKVVLIGDSAVGKSQIL+RFAR+EFSLDSKATIGVEFQTRT+VI+HKSVKA
Sbjct: 2 DMNPKIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKA 61
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDH+PRWLEELR+HAD NIVI+L+
Sbjct: 62 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLV 121
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DL+ RAVPTEDAKEFAQKEGLFFLETSA+EATNVE AF+TVLTEIF IV+KK+L
Sbjct: 122 GNKCDLDNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLI 181
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A + QGNGN ASLSG I+VPG Q+ K CC
Sbjct: 182 ASQDQGNGNHASLSGTSIVVPGQEQDTTTKKKSCC 216
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/197 (89%), Positives = 189/197 (95%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQ+IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLVI HK+VKAQI
Sbjct: 12 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 71
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HADKNIVIILIGN
Sbjct: 72 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 131
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DLE QR VPTEDAKEFA+KEGLFFLETSALEATNVE AF+TVLTEI+NIVNKKNLTA
Sbjct: 132 KCDLESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 191
Query: 191 EGQGNGNPASLSGKKIL 207
E QGNGN ASLSG+KI+
Sbjct: 192 ENQGNGNSASLSGQKII 208
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/211 (82%), Positives = 197/211 (93%), Gaps = 2/211 (0%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL I+ KS+KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGAVGAMLVYD+++R++F+HIPRWLEELR+HADKNIVIILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DLE+QRAVPTEDAKEFA+KEGLFFLETSAL ATNVEN+F T++T+I+N VNKKNL A EG
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNL-ASEG 191
Query: 193 QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N NP SL+GKKIL+PG QEIPAK+S CC
Sbjct: 192 DSN-NPGSLAGKKILIPGSGQEIPAKTSTCC 221
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/211 (81%), Positives = 196/211 (92%), Gaps = 2/211 (0%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL I+ KS+KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGAVGAMLVYD+++R++F+HIPRWLEELR+HADKNIVIILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DLE+QRAVPTEDAKEFA+KEGLFFLETSAL ATNVEN+F T++T+I+N VNKKNL A EG
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNL-ASEG 191
Query: 193 QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N NP SL+GKKIL+P QEIPAK+S CC
Sbjct: 192 DSN-NPGSLAGKKILIPASGQEIPAKTSTCC 221
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/211 (81%), Positives = 196/211 (92%), Gaps = 2/211 (0%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL I+ KS+KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGAVGAMLVYD+++R++F+HIPRWLEELR+HADKNIVIILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DLE+QRAVPTEDAKEFA+KEGLFFLETSAL ATNVEN+F T++T+I+N VNKKNL A E
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNL-ASEC 191
Query: 193 QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N NP SL+GKKIL+PG QEIPAK+S CC
Sbjct: 192 DSN-NPGSLAGKKILIPGSGQEIPAKTSTCC 221
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 365 bits (936), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 179/225 (79%), Positives = 199/225 (88%), Gaps = 9/225 (4%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA GG K+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MAGGG------DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 54
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I+HKSVKAQIWDTAGQERYRAVTSAYYRGA+GA+LVYDI++RQSFDHIPRWLEELR HAD
Sbjct: 55 IEHKSVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHAD 114
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVI+L+GNKSDLE++RAV TEDAKEFA+KE LFFLETSAL+ATNVENAF TVLTEIF
Sbjct: 115 KNIVIMLVGNKSDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFK 174
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
I +KKN+ A + + NG SL+GKK++VPGPAQEIP S CC +
Sbjct: 175 IHSKKNM-AADPRANGAAPSLAGKKVIVPGPAQEIP--KSKCCSS 216
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/222 (80%), Positives = 197/222 (88%), Gaps = 8/222 (3%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
GGG K+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI H
Sbjct: 3 GGG-----DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDH 57
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
KSVKAQIWDTAGQERYRAVTSAYYRGA+GA+LVYDI++RQSFDHIPRWLEELR HADKNI
Sbjct: 58 KSVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNI 117
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+L+GNKSDLEE+RAV +EDAKEFA+KE LFFLETSAL+ATNVENAF TVLTEIF I +
Sbjct: 118 VIMLVGNKSDLEEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHS 177
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
KKN+ A + + NG SL+GKK++VPGPAQEIP S CC +
Sbjct: 178 KKNM-AADPKANGAAPSLAGKKVIVPGPAQEIP--KSKCCSS 216
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 362 bits (929), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/213 (81%), Positives = 195/213 (91%), Gaps = 3/213 (1%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
K+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL+I HKSVKAQIWD
Sbjct: 6 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIWD 65
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGA+GA+LVYDI++RQSFDHIPRWLEELR HADKNIVI+L+GNKS
Sbjct: 66 TAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKS 125
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DLE++RAV TEDAKEFA+KE +FFLETSAL+ATNVENAF TVL+EIF I +KKN+ A E
Sbjct: 126 DLEDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKKNI-AAEP 184
Query: 193 QGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ NG+ SL+GKK+LVPGPAQEIP S CC +
Sbjct: 185 KANGSAPSLAGKKVLVPGPAQEIP--KSKCCSS 215
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 176/221 (79%), Positives = 197/221 (89%), Gaps = 6/221 (2%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
G GD K+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI H+
Sbjct: 2 AGAGD---KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHR 58
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
SVKAQIWDTAGQERYRAVTSAYYRGA+GA+LVYDI+RRQSFDHIPRWL+ELR+HADKNIV
Sbjct: 59 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIV 118
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
I+L+GNKSDLEEQRAV TEDAKEFA+KE LFFLETSAL+ATNVE+AF TVLTEIF I +K
Sbjct: 119 IMLVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSK 178
Query: 185 KNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
KN+ + E + NG +++G K+LVPGPAQEIP S CC +
Sbjct: 179 KNMVS-EPKSNGVAPAMAGTKVLVPGPAQEIP--KSKCCSS 216
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 176/221 (79%), Positives = 196/221 (88%), Gaps = 6/221 (2%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
G GD K+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI H+
Sbjct: 2 AGAGD---KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHR 58
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
SVKAQIWDTAGQERYRAVTSAYYRGA+GA+LVYDI+RRQSFDHIPRWL+ELR+HADKNIV
Sbjct: 59 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIV 118
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
I+L+GNKSDLEEQRAV TEDAKEFA+KE LFFLETSAL+ATNVE+AF TVLTEIF I +K
Sbjct: 119 IMLVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSK 178
Query: 185 KNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
KN+ + E + NG ++ G K+LVPGPAQEIP S CC +
Sbjct: 179 KNMVS-EPKSNGAAPAMPGTKVLVPGPAQEIP--KSKCCSS 216
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/221 (79%), Positives = 196/221 (88%), Gaps = 6/221 (2%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
G GD K+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI H+
Sbjct: 2 AGAGD---KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHR 58
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
SVKAQIWDTAGQERYRAVTSAYYRGA+GA+LVYDI+RRQSFDHIPRWL+ELR+HADKNIV
Sbjct: 59 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIV 118
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
I+L+GNKSDLEEQRAV TEDAKEFA+KE LFFLETSAL+ATNVE++F TVLTEIF I +K
Sbjct: 119 IMLVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSK 178
Query: 185 KNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
KN+ + E + NG ++ G K+LVPGPAQEIP S CC +
Sbjct: 179 KNMVS-EPKSNGAAPAMPGTKVLVPGPAQEIP--KSKCCSS 216
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 172/214 (80%), Positives = 195/214 (91%), Gaps = 3/214 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+K+DYVFKVVLIGDSAVGKSQILARFARNEFS+DSKATIGVEFQTRTL+I HKSVKAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GA+LVYDI++RQSFDHIPRWLEELR HADKNIVI+L+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDLE++RAV TEDAKEFA+KE LFFLETSAL+ATNVENAF TVL+EIF I +KKN+ A +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNM-AAD 183
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ NG SL+GKK++VPGPAQEIP S CC +
Sbjct: 184 PKANGAAPSLAGKKVVVPGPAQEIP--KSKCCSS 215
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 191/221 (86%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
G YGD +IDYVFK+VLIGDSAVGKSQ+LARFARNEFSLDSKATIGVEFQTRTLVI HK
Sbjct: 3 GSYGDYGPRIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHK 62
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDH+ RWLEELR HAD NIV
Sbjct: 63 TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIV 122
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
I+LIGNK DL RAVP EDA+EFAQ+EGLFFLETSALEA NVE+AF+TVLT+I+ I++K
Sbjct: 123 IMLIGNKCDLGNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISK 182
Query: 185 KNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
K L A + QGNGN A L+G K++VPG Q++ + CC +
Sbjct: 183 KALIANDDQGNGNSALLTGTKLVVPGEEQDVSTNNKYCCSS 223
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/212 (80%), Positives = 192/212 (90%), Gaps = 3/212 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+K+DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI HKSVKAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GA+LVYDI++RQSFDHIPRWLEELR HADKNI+I+L+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDLE++RAV TEDAKEFA+KE LFFLETSAL+ATNVE+AF TVL+EIF I +KKN+ +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVT-D 183
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ NG L+GKK+LVPGPAQEIP S CC
Sbjct: 184 PKANGAAPPLAGKKVLVPGPAQEIP--KSKCC 213
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 348 bits (894), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/224 (76%), Positives = 192/224 (85%), Gaps = 2/224 (0%)
Query: 1 MASGGG-YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 59
M+ GGG YG+ QKIDYVFKVVLIGDSAVGKSQ+LARFARNEF+LDSKATIGVEFQTRTL
Sbjct: 1 MSRGGGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTL 60
Query: 60 VIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHA 119
I ++VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HA
Sbjct: 61 HIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHA 120
Query: 120 DKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
DKNIVI+LIGNKSDL R VPTEDAKEFA++E LFF+ETSALE+TNVENAFMTVLTEI+
Sbjct: 121 DKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIY 180
Query: 180 NIVNKKNLTAGEG-QGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IV+KKNL A E +GN + L G KI+VPG P K+S C
Sbjct: 181 RIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCC 224
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/223 (74%), Positives = 190/223 (85%), Gaps = 1/223 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M+ GGGYG+ Q+IDYVFKVVLIGDSAVGKSQ+LARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1 MSRGGGYGEVGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQ 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ +++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR+HAD
Sbjct: 61 VDQRTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KN+VI+LIGNKSDL R VPTEDAKEFA +E LFF+ETSALEATNVENAF T LTEI+
Sbjct: 121 KNLVIMLIGNKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYR 180
Query: 181 IVNKKNLTAG-EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
V+KKNL A E +GN + L G KI+VPG PAK++ C
Sbjct: 181 NVSKKNLVANEETDSSGNSSLLKGTKIIVPGQEPAPPAKAACC 223
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 162/213 (76%), Positives = 189/213 (88%), Gaps = 1/213 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQKIDYVFK+VLIGDSAVGKSQ+LARFARNEF+LDSKATIGVEFQT+T+V+ HK+VKAQI
Sbjct: 9 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQI 68
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ +WLEELR HAD NIVI+L+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGN 128
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDLE RAVP EDAKEFAQKE LFF+ETSALEATNVE+AF++VLTEI+ +V+KK+L A
Sbjct: 129 KSDLESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVAN 188
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G GN + L G KI++PG E+ A +S CC
Sbjct: 189 DEYG-GNNSLLKGNKIVIPGQEPEMQATNSSCC 220
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/225 (75%), Positives = 192/225 (85%), Gaps = 4/225 (1%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M+ GG +G+ Q+IDYVFKVVLIGDSAVGKSQ+LARFARNEF+LDSKATIGVEFQTRTL
Sbjct: 1 MSRGGSHGELGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLN 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I ++VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HAD
Sbjct: 61 IDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVI+LIGNKSDL R+V TEDAKEFA++E LFF+ETSALEA NVENAFMTVLTEI+
Sbjct: 121 KNIVIMLIGNKSDLGTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYR 180
Query: 181 IVNKKNLTAG-EGQGNGNPASLSGKKILVPGPAQEIPAKS-SMCC 223
+V+KKNL A E +GN + L G KI+VPG QE P S + CC
Sbjct: 181 VVSKKNLVANEESDSSGNSSLLKGTKIVVPG--QEPPPTSKATCC 223
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 190/217 (87%), Gaps = 2/217 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TLVI +K+V
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ +WLEELR HADKNIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSALEATNVE AF+T+LTEI+ I++KK+
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LTA + +GN + L G +I++ P+++ K CC
Sbjct: 185 LTADDDDADGNSSLLKGTRIII--PSEQESGKRGGCC 219
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/215 (75%), Positives = 184/215 (85%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQKIDYVFK+VLIGDSAVGKSQ+LARFARNEFSLDSKATIGVEFQT+TLVI HK+VKAQI
Sbjct: 10 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQI 69
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ +WLEELR HAD NIVI+LIGN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGN 129
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTEDAKEFAQKE LFF+ETSALEATNVE+AF++VLTEI+ +++KK L A
Sbjct: 130 KSDLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIAN 189
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E + G+ + L G I+VP +S CC T
Sbjct: 190 EQESGGSSSLLKGTNIVVPEQEPVSGGRSFSCCGT 224
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/217 (74%), Positives = 186/217 (85%), Gaps = 1/217 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
GD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEF+LDSKATIGVEFQT+TLVI HK+VK
Sbjct: 7 GDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKTVK 66
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWL+ELR HADKNIVI+L
Sbjct: 67 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIML 126
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL +AVPTEDAKEFA++E LFF+ETSALEATNVE AF++VLTEI+ I++KK L
Sbjct: 127 VGNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKKTL 186
Query: 188 TAGEG-QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A E + GN + L G KI+VPG + CC
Sbjct: 187 VANEEVESGGNSSLLKGTKIIVPGKEPKSEGSKYNCC 223
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/225 (74%), Positives = 191/225 (84%), Gaps = 4/225 (1%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M+ GG +G+ Q+IDYVFKVVLIGDSAVGKSQ+LARFARN+F+LDSKATIGVEFQTRTL
Sbjct: 1 MSRGGSHGELGQRIDYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLN 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I ++VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HAD
Sbjct: 61 IDARNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVI+L+GNKSDL RAVP EDAKEFA++E LFF+ETSALEA NVENAFMTVLTEI+
Sbjct: 121 KNIVIMLMGNKSDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYR 180
Query: 181 IVNKKNLTAG-EGQGNGNPASLSGKKILVPGPAQEIPAK-SSMCC 223
V+KKNL A E +GN + L G KI+VPG QE P+ + CC
Sbjct: 181 TVSKKNLVANEEPDSSGNSSLLKGTKIVVPG--QEPPSTLKATCC 223
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 185/218 (84%), Gaps = 1/218 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD +Q+IDY+FKVV+IGDSAVGKSQIL+RFA+NEFSLDSK+TIGVEFQTRT+ I +K++
Sbjct: 5 YGDYDQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTI 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
K QIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ RWLEELR HAD NIVI+
Sbjct: 65 KTQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL + RAVP EDAKEFAQ+EGLFF ETSALEA NVE AF+T LTEI+ IV++K
Sbjct: 125 LIGNKCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKA 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEI-PAKSSMCC 223
LTA E + NGN A+L+G KI + P Q + K CC
Sbjct: 185 LTANEEERNGNAAALTGTKIALSSPEQPVMTVKKRSCC 222
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/224 (75%), Positives = 189/224 (84%), Gaps = 2/224 (0%)
Query: 1 MASGGG-YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 59
M+ GGG YG+ QKIDYVFKVVLIGDSAVGKSQ+LA FARNEF+LDSKATIGVEFQTRTL
Sbjct: 1 MSRGGGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTL 60
Query: 60 VIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHA 119
I ++VKAQ DTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HA
Sbjct: 61 HIDARTVKAQTRDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHA 120
Query: 120 DKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
DKNIVI+LIGNKSDL R VPTEDAKEFA++E LFF+ETSALE+TN+ENAFMTVLTEI+
Sbjct: 121 DKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIY 180
Query: 180 NIVNKKNLTAGEG-QGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IV+KKNL A E +GN + L G KI+VPG P K+S C
Sbjct: 181 RIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCC 224
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/218 (74%), Positives = 186/218 (85%), Gaps = 3/218 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGK+Q+LARF+RNEFS+DSKATIGVEFQT+TLVI K+V
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWLEELR HADKNIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFA++E LFF+ETSALE+TNVE AF T+LTEI+ I++KK+
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
Query: 187 LTAGEGQGNG-NPASLSGKKILVPGPAQEIPAKSSMCC 223
L AGE G NPA G I+VPG Q+ K CC
Sbjct: 185 LAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKG--CC 220
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 166/225 (73%), Positives = 190/225 (84%), Gaps = 4/225 (1%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M+ GG +G+ Q+IDYVFKVVLIGDSA GKSQ+LARFARN+F+LDSKATIGVEFQTRTL
Sbjct: 1 MSRGGSHGELGQRIDYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLN 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I ++VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HAD
Sbjct: 61 IDARNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVI+L+GNKSDL RAVP EDAKEFA++E LFF+ETSALEA NVENAFMTVLTEI+
Sbjct: 121 KNIVIMLMGNKSDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYR 180
Query: 181 IVNKKNLTAG-EGQGNGNPASLSGKKILVPGPAQEIPAK-SSMCC 223
V+KKNL A E +GN + L G KI+VPG QE P+ + CC
Sbjct: 181 TVSKKNLVANEEPDSSGNSSLLKGTKIVVPG--QEPPSTLKATCC 223
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 186/218 (85%), Gaps = 2/218 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGKSQ+LARFARNEF++DSKATIGVEFQT+TL I K+V
Sbjct: 5 YGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWLEELR HADKNIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNKSDL RAVPTEDA+EFA++E LFF+ETSALEATNVE AF+TVLT+I+ I++KK
Sbjct: 125 LIGNKSDLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKT 184
Query: 187 LTAG-EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LTA + G+ L G KI+VPG + A+ CC
Sbjct: 185 LTANTDTDSTGSSTLLKGTKIIVPG-GPDSAAQKGGCC 221
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 187/216 (86%), Gaps = 3/216 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEFS++SKATIGVEFQTRTL I HK++KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQI 68
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HADKNIVI+LIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAVPTEDAKEFAQ+E LFF+ETSAL++ NVE +F+TVLTEI+ IV+KKNL A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 191 -EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
EG+ G+ + L G KI+V G +E +K CC T
Sbjct: 189 EEGESGGDSSLLQGTKIVVAG--EETESKGKGCCGT 222
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 184/218 (84%), Gaps = 2/218 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y D NQKIDYVFK+VLIGDSAVGKSQ+LARFARNEF +DSKATIGVEFQT+TL I +K+V
Sbjct: 4 YVDFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTV 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWLEELR HADKNIVI+
Sbjct: 64 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVP EDA+EFAQ+E LFF+ETSALE+TNVE AF+TVLTEI+ +++KK
Sbjct: 124 LIGNKCDLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKT 183
Query: 187 LTAGEG-QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LTA E NG L G +I+VPG Q PAK CC
Sbjct: 184 LTANEELDTNGTSGLLKGTRIIVPGHDQA-PAKKGGCC 220
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/212 (75%), Positives = 182/212 (85%), Gaps = 1/212 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++IDYVFKVVLIGDSAVGKSQ+LARFARNEFSLDSKATIGVEFQTRTL + +++KAQIW
Sbjct: 13 KRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIW 72
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR+HADKN+VI+LIGNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNK 132
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG- 190
SDL R VPTEDAKEFA +E LFF+ETSALEATNVENAF T LTEI+ V+KKNL A
Sbjct: 133 SDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANE 192
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
E +GN + L G KI+VPG PAK++ C
Sbjct: 193 ETDSSGNSSLLKGTKIIVPGQEPAPPAKAACC 224
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 332 bits (851), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 158/217 (72%), Positives = 188/217 (86%), Gaps = 4/217 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TLVI +K+V
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER AVTSAYYRGAVGAMLVYD+++RQSFDH+ +WLEELR HADKNIVI+
Sbjct: 65 KAQIWDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 122
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSALEATNVE AF+T+LTEI+ I++KK+
Sbjct: 123 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 182
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LTA + +GN + L G +I++ P+++ K CC
Sbjct: 183 LTADDDDADGNSSLLKGTRIII--PSEQESGKRGGCC 217
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/216 (74%), Positives = 186/216 (86%), Gaps = 3/216 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEFS++SKATIGVEFQTRTL I K++KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HADKNIVI+LIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAVPTEDAKEFAQ+E LFF+ETSAL++ NVE +F+TVLTEI+ IV+KKNL A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 191 -EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
EG+ G+ + L G KI+V G +E +K CC T
Sbjct: 189 EEGESGGDSSLLQGTKIVVAG--EETESKGKGCCGT 222
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 182/217 (83%), Gaps = 3/217 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y D NQKIDYVFK+VLIGDSAVGKSQ LARFARNEF+ DSKATIGVEFQT+TL + +K+V
Sbjct: 4 YVDYNQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTV 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWLEELR HADK+I+I+
Sbjct: 64 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIM 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSALEATNVE AF TVLTEI+ I++KK
Sbjct: 124 LIGNKCDLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIISKKT 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
L AG + +GNP G +ILVP AQ K CC
Sbjct: 184 L-AGNDKSDGNPGVFKGTRILVPSQAQNSEKKG--CC 217
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 184/216 (85%), Gaps = 3/216 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQKIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSKATIGVEFQT+TL I K++KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R VPTEDAKEFAQ E L F+ETSALEATNVE AF T+LTEI+ +++KK L A
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 191 EGQGNGNPAS-LSGKKILVPGPAQEIPAKSSMCCRT 225
+ +G +S L G KI+VPG QE A SS CCR+
Sbjct: 189 DETDSGGSSSLLKGTKIVVPG--QEPQAASSGCCRS 222
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 329 bits (843), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 185/217 (85%), Gaps = 3/217 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y D NQKIDYVFK+VLIGDSAVGKSQ+LARFARNEF++DSKATIGVEFQT+TL + +K+V
Sbjct: 4 YVDYNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTV 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWLEELR HADK+I+I+
Sbjct: 64 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIM 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVP EDAKEFAQ+E LFF+ETSALEATNVE AF+T+LTEI+ I++K+
Sbjct: 124 LIGNKCDLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRT 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
L AG + N N + G +ILV P+QE ++ CC
Sbjct: 184 L-AGNDESNENSGAFKGTRILV--PSQEQNSEKKGCC 217
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 328 bits (842), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 183/216 (84%), Gaps = 3/216 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQKIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSKATIGVEFQT+TL I K++KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R VPTEDAKEFAQ E L F+ETSALEATNVE AF T+LTEI+ +++KK L A
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 191 EGQGNGNPAS-LSGKKILVPGPAQEIPAKSSMCCRT 225
+ +G +S L G K +VPG QE A SS CCR+
Sbjct: 189 DETDSGGSSSLLKGTKXVVPG--QEPQAASSGCCRS 222
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/218 (71%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGK+Q+LARF+RN+F++DSKATIGVEFQT+TLVI +K+V
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWLEELR HAD NIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL +AVPTEDA+EFAQ+E LFF+ETSALE+TNVE AF+T+LTEI+ +++KK
Sbjct: 125 LIGNKCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKT 184
Query: 187 LTAG-EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LTA E G L G +I+VP K CC
Sbjct: 185 LTANDEADPGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/214 (73%), Positives = 181/214 (84%), Gaps = 17/214 (7%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+K+DYVFKVVLIGDSAVGKSQILARFARNEFS+DSKATIGVEFQTRTL+I HK
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK------- 57
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
YRAVTSAYYRGA+GA+LVYDI++RQSFDHIPRWLEELR HADKNIVI+L+GNK
Sbjct: 58 -------YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 110
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDLE++RAV TEDAKEFA+KE LFFLETSAL+ATNVENAF TVL+EIF I +KKN+ A +
Sbjct: 111 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNM-AAD 169
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ NG SL+GKK++VPGPAQEIP S CC +
Sbjct: 170 PKANGAAPSLAGKKVVVPGPAQEIP--KSKCCSS 201
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/217 (70%), Positives = 180/217 (82%), Gaps = 1/217 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD +QKIDYVFKVVLIGDSAVGK+Q+LARFARNEFSLDSKATIGVEFQT+TL+I +K++
Sbjct: 5 YGDYHQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTI 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWLEELR HAD+NIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVP EDA+E AQ+E LFF+ETSALE+TNVE F+T+LTEI+ I KK+
Sbjct: 125 LIGNKCDLGSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKS 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LTA + N L G +I+VP + K CC
Sbjct: 185 LTASD-DDNWGSGLLKGSRIIVPNQEIDNGGKKGGCC 220
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/222 (70%), Positives = 188/222 (84%), Gaps = 7/222 (3%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YG+ NQKIDYVFKVVLIGDSAVGK+Q+LARFA+N+FS+DSKATIGVEFQT+TL+I +K+V
Sbjct: 91 YGEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTV 150
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFD++ +WLEELR HADKNIV++
Sbjct: 151 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVM 210
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSALE+TNVE AF+T+LTEI+ +++KK
Sbjct: 211 LIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKT 270
Query: 187 LTAG-EGQGNGNPASLSGKKILVPGPAQEIPAKSSM----CC 223
LTA + +G L G KI+V P+QEI A CC
Sbjct: 271 LTANDDADPSGISGLLKGTKIIV--PSQEINAGEKKGKGGCC 310
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/222 (69%), Positives = 182/222 (81%), Gaps = 2/222 (0%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
Y + + KIDYVFKVVLIGDSAVGKSQ+LARF+RNEFSL+SKATIGVEFQTRT+V+ H
Sbjct: 2 ANAYNEYDNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDH 61
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI+++QSFDH+ RWLEELR+HAD NI
Sbjct: 62 KTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANI 121
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+LIGNKSDL R V T+ A+EFA+KE L FLETSA+E+TNVE AF TVL+EI+ +V+
Sbjct: 122 VIMLIGNKSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVS 181
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
KK L A E QGN +P L G KI + I AK + CC +
Sbjct: 182 KKALLADENQGN-SPL-LPGTKIKLADKDDVIGAKKAGCCSS 221
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 177/217 (81%), Gaps = 1/217 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGK+Q+LARFARNEFSLDSKATIGVEFQT+TL+I +K +
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKII 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ +WLEELR HAD+NIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVP EDA+E AQ+E LFF+ETSALE+TNVE F+T+LTEI+ I KK+
Sbjct: 125 LIGNKCDLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKS 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LT + G L G +I+VP K CC
Sbjct: 185 LTTSD-DDIGGSGLLKGSRIIVPNQEIYNGGKKGGCC 220
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/220 (70%), Positives = 186/220 (84%), Gaps = 5/220 (2%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YG+ N KIDYVFKVVL+GDSAVGK+Q+LARFA+N+F++DSKATIGVEFQT+TL+I K+V
Sbjct: 5 YGEYNHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD++RR SFD++ +WLEELR HADKNIV++
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSALE+TNVE AF+T+LTEI+ +V+KK
Sbjct: 125 LIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKT 184
Query: 187 LTAG-EGQGNGNPASLSGKKILVPGPAQEIPA--KSSMCC 223
LTA + +G L G KI+V P+Q+I A K CC
Sbjct: 185 LTANDDADPSGISGLLKGTKIIV--PSQDINAGEKKGGCC 222
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/197 (74%), Positives = 175/197 (88%), Gaps = 3/197 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGK+Q+LARF+RN+F++DSKATIGVEFQT+TLVI K+V
Sbjct: 5 YGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ +WLEELR HAD NIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL +AVPTEDA+EFAQ+E LFF+ETSALE+TNVE AF+T+LTEI+ ++ KK
Sbjct: 125 LIGNKCDLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKT 184
Query: 187 LTAGEGQGNGNPASLSG 203
LTA + + +P+ SG
Sbjct: 185 LTAND---DTDPSGSSG 198
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 151/218 (69%), Positives = 179/218 (82%), Gaps = 2/218 (0%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
GY + + KIDYVFKVVLIGDSAVGKSQ+L+RF+RNEFSL+SKATIGVEFQTRT+V+ HK+
Sbjct: 4 GYNEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKT 63
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
+KAQIWDTAGQERYRAVTSAYYRGAVGAM+VYDI++ QSFDH+ RWLEELR+HAD NIVI
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVI 123
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+LIGNKSDL R V T+ A+E+A+K+GL FLETSA+E+TNVE AF TVL+EI+ V+KK
Sbjct: 124 MLIGNKSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKK 183
Query: 186 NLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
L A E QG G P L G KI + I K + CC
Sbjct: 184 ALIADENQG-GAPL-LPGTKITLTDKDDVIGTKKAGCC 219
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 143/185 (77%), Positives = 172/185 (92%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YG+ NQKIDYVFKVVLIGDSAVGK+Q+LARFA+N+FS+DSKATIGVEFQT+TL+I +K+V
Sbjct: 6 YGEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTV 65
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFD++ +WLEELR HADKNIV++
Sbjct: 66 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVM 125
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSALE+TNVE AF+T+LTEI+ +++KK
Sbjct: 126 LIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKT 185
Query: 187 LTAGE 191
LTA +
Sbjct: 186 LTAND 190
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 180/222 (81%), Gaps = 2/222 (0%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
GY + + KIDYVFKVVLIGDSAVGKSQ+L+RF+RNEFSL+SKATIGVEFQTRT+V+ H
Sbjct: 2 ANGYHEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDH 61
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI+++QSFDH+ RWLEELR+HAD NI
Sbjct: 62 KTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANI 121
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+LIGNKSDL R V T+ A+ +A+KE L FLETSA+E+TNVE AF VL+EI+ IV+
Sbjct: 122 VIMLIGNKSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVS 181
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
K L A E QG G P LSG KI + I +K + CC +
Sbjct: 182 KNALIADENQG-GTPL-LSGTKINLTDKDDVIGSKRAGCCSS 221
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/173 (82%), Positives = 158/173 (91%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
+G+ NQKIDYVFKVVLIGDSAVGKSQ+LARFARNEFSLDSKATIGVEFQTRTL I ++V
Sbjct: 5 HGEFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ RWL ELR HADKNIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
LIGNKSDL RAVPTEDAKEFA++E LFF+ETS LE+ NVE+AF TVLTEI
Sbjct: 125 LIGNKSDLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEIL 177
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 179/218 (82%), Gaps = 6/218 (2%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
G+ D NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEF+L+SKATIGVEFQTRT+V+ HK+
Sbjct: 3 GFVDMNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKT 62
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
+KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI++R +F+H+ RWLEEL+ HAD NIV+
Sbjct: 63 IKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVV 122
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNKSDL RAV E+AK+ A++E LFF+ETSALEATNV++AF +VLTEI+ IV+KK
Sbjct: 123 MLVGNKSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKK 182
Query: 186 NLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+L+ EG G + G +L+ E + CC
Sbjct: 183 SLS--EGAGGSQQVPIPGTTLLLS----EKKESKTGCC 214
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 179/218 (82%), Gaps = 6/218 (2%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
G+ D NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEF+L+SKATIGVEFQTRT+V+ HK+
Sbjct: 3 GFVDMNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKT 62
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
+KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI++R +F+H+ RWLEEL+ HAD NIV+
Sbjct: 63 IKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVV 122
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNKSDL RAV E+AK+ A++E LFF+ETSALEATNV++AF +VLTEI+ IV+KK
Sbjct: 123 MLVGNKSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKK 182
Query: 186 NLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+L+ EG G + G +L+ E + CC
Sbjct: 183 SLS--EGAGGSQQIPIPGTTLLLS----EKKESKTGCC 214
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/220 (65%), Positives = 179/220 (81%), Gaps = 5/220 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + KIDYVFKVVLIGDSAVGKSQ+L+RFAR+EF+L+SK+TIGVEFQTRT+ + K++KA
Sbjct: 3 DFDVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGAVGAMLVYDI+R+Q+F+H+ RWLEELR+HAD N+VI+++
Sbjct: 63 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMV 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL RA+ E+ +EF++KEGL+F+ETSAL++TNVE AF TVLTEI+ IV+KK+L
Sbjct: 123 GNKSDLSNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLA 182
Query: 189 AGE---GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A + G N P SG KIL+ + K CC T
Sbjct: 183 ADDPNGGLANVMPPVPSGNKILLDDELTAV--KKRACCST 220
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 142/220 (64%), Positives = 178/220 (80%), Gaps = 5/220 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + KIDYVFKVVLIGDSAVGKSQ+L+RFAR+EF+L+SK+TIGVEFQTRT+ + K++KA
Sbjct: 3 DFDVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGAVGAMLVYDI+R+Q+F+H+ RWLEELR+HAD N+VI+++
Sbjct: 63 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMV 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL R + E+ +EF++KEGL+F+ETSAL++TNVE AF TVLTEI+ IV+KK+L
Sbjct: 123 GNKSDLSNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLA 182
Query: 189 AGE---GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A + G N P SG KIL+ + K CC T
Sbjct: 183 ADDPNGGLANVMPPVPSGNKILLDDELTAV--KKRACCST 220
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 177/219 (80%), Gaps = 5/219 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D +KIDYVFKVV+IGDSAVGK+QIL+RFA+NEF DSK+TIGVEFQTRT+ I K +KA
Sbjct: 24 DVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIKA 83
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ RW+EELR+HAD +IVI+L+
Sbjct: 84 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLV 143
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK+DL +QR VPTEDA EFA+ +GLFF ETSAL NVE+AF+ +L EI +V+KK L
Sbjct: 144 GNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALE 203
Query: 189 AGEGQGNG--NPASLSGKKI-LVPGPAQEIP--AKSSMC 222
G G+ NG N ASL G K+ ++ GP EI K S C
Sbjct: 204 CGLGKENGDTNVASLKGTKVDIILGPELEISEMKKLSSC 242
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/220 (66%), Positives = 178/220 (80%), Gaps = 6/220 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D +KIDYVFKVV+IGDSAVGK+QIL+RFA+NEF DSK+TIGVEFQTRT+ I K +KA
Sbjct: 24 DVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKA 83
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ RW+EELR+HAD +IVI+L+
Sbjct: 84 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLV 143
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK+DL +QR VPTEDA EFA+ +GLFF ETSAL NVE+AF+ +L EI +V+KK L
Sbjct: 144 GNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALE 203
Query: 189 AGEGQGNGNP---ASLSGKKI-LVPGPAQEIP--AKSSMC 222
G G+ NG+ ASL+G K+ ++ GP EI K S C
Sbjct: 204 CGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKLSSC 243
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 179/236 (75%), Gaps = 14/236 (5%)
Query: 1 MASGGGYGDP--------NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGV 52
M G +GD ++KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGV
Sbjct: 5 MNGAGSHGDQSHQNQENGHEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGV 64
Query: 53 EFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWL 112
EFQTRT+ I+ K +KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQ+FDH+ RW+
Sbjct: 65 EFQTRTVTIKSKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWV 124
Query: 113 EELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFM 172
EELR+HAD +IVI+L+GNK+DL +QRAVP+EDA EF++ +GLFF ETSAL NVE AF
Sbjct: 125 EELRAHADTSIVIMLVGNKADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFF 184
Query: 173 TVLTEIFNIVNKKNLTAGEGQGNGNPAS-LSGKKILVPGPAQ----EIPAKSSMCC 223
VL EI+ +V+KK L +G+ NG AS L G KI V + E+ S+ C
Sbjct: 185 RVLEEIYGVVSKKALEC-DGKSNGCDASNLKGSKIDVISASDLEISEVKKLSACTC 239
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 179/236 (75%), Gaps = 14/236 (5%)
Query: 1 MASGGGYGDP--------NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGV 52
M G +GD ++KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGV
Sbjct: 1 MNGAGSHGDQSHQNQENGHEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGV 60
Query: 53 EFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWL 112
EFQTRT+ I+ K +KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQ+FDH+ RW+
Sbjct: 61 EFQTRTVTIKSKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWV 120
Query: 113 EELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFM 172
EELR+HAD +IVI+L+GNK+DL +QRAVP+EDA EF++ +GLFF ETSAL NVE AF
Sbjct: 121 EELRAHADTSIVIMLVGNKADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFF 180
Query: 173 TVLTEIFNIVNKKNLTAGEGQGNGNPAS-LSGKKILVPGPAQ----EIPAKSSMCC 223
VL EI+ +V+KK L +G+ NG AS L G KI V + E+ S+ C
Sbjct: 181 RVLEEIYGVVSKKALEC-DGKSNGCDASNLKGSKIDVISASDLEISEVKKLSACTC 235
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 172/219 (78%), Gaps = 5/219 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
+ + KIDYVFKVV+IGDSAVGK+QIL+RFA+NEF DSK+TIGVEFQTRT+ I K +KA
Sbjct: 16 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKA 75
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGA+GAMLVYDIS+RQSFDH+ RW++ELR+HAD +IVI+LI
Sbjct: 76 QIWDTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLI 135
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DL +QR V EDA EFA+ +GLFF ETSAL NVE+AF +L EI +++K++L
Sbjct: 136 GNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLE 195
Query: 189 AGEGQGNG--NPASLSGKKI-LVPGPAQEIP--AKSSMC 222
G G+ N N A+L G KI ++ G EI K S C
Sbjct: 196 CGNGKANADNNLATLKGSKIDVISGAELEITDMKKLSSC 234
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/215 (64%), Positives = 171/215 (79%), Gaps = 4/215 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQTRT+ I+ K VKAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIW 74
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAMLVYDI++R +FDH+ RW+EELR+HAD +IVI LIGNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNK 134
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL +QRAVPTEDA EFA+ +GLFF ETSAL NV+ AF +L EI+ +++KK+L G
Sbjct: 135 ADLVDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECGG 194
Query: 192 GQGNG-NPASLSGKKI-LVPGPAQEIP--AKSSMC 222
+ NG + L G KI ++ G EI K S C
Sbjct: 195 HKTNGADSVMLRGSKIDVISGSDLEISEMKKLSAC 229
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 172/219 (78%), Gaps = 5/219 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
+ + KIDYVFKVV+IGDSAVGK+QIL+RFA+NEF +SK+TIGVEFQTR++ I K +KA
Sbjct: 16 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKA 75
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ RW++ELR+HAD +IVI+LI
Sbjct: 76 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLI 135
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DL +QR V EDA EFA+ +GLFF ETSAL NVE++F +L EI +++K++L
Sbjct: 136 GNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLE 195
Query: 189 AGEGQGNG--NPASLSGKKI-LVPGPAQEIP--AKSSMC 222
G+ N N A+L G KI ++ G EI KSS C
Sbjct: 196 CDNGKANADNNVATLKGSKIDVISGAELEIAEMKKSSSC 234
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 165/200 (82%), Gaps = 9/200 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGVEFQTRT++I+ K +KAQIW
Sbjct: 3 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQIW 62
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAMLVYDI++R +FDH+ RW+EELR+HAD +IVI+LIGNK
Sbjct: 63 DTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGNK 122
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL + RAVPTEDA EFA+++GLFF ETSAL NV+ AF +L EI+ ++ KK+L
Sbjct: 123 ADLVDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLEC-- 180
Query: 192 GQGNGNP-----ASLSGKKI 206
GNGNP +L G KI
Sbjct: 181 --GNGNPHAADAITLRGSKI 198
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 169/209 (80%), Gaps = 4/209 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGVEFQT+T+ I K +KAQIW
Sbjct: 4 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIW 63
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAMLVYDI++RQ+FDH+ RW+EELRSHAD +IVI+LIGNK
Sbjct: 64 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNK 123
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DL +QR V TEDA EFA+ +GLFF ETSA NV +AF+ +L EI +V+K++L
Sbjct: 124 GDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLECNN 183
Query: 192 G-QGNGNP--ASLSGKKI-LVPGPAQEIP 216
G +GNGN A+L G+KI ++ G EI
Sbjct: 184 GIKGNGNHDVAALKGEKIDIISGSELEIS 212
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+++ DY+FKVVLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A+KEGL F+ETSALEATNV+ AF T+L+EI+ I++KK L++
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTLSS 184
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
E + P S+ GK I+V GP + K + CC
Sbjct: 185 EE---SAAPVSVKDGKTIVVGGP--DPSTKKTTCC 214
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 171/221 (77%), Gaps = 6/221 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
+ + KIDYVFKVV+IGDSAVGK+QIL+RFA+NEF +SK+TIGVEFQTR++ I K +KA
Sbjct: 16 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKA 75
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ RW++ELR+HAD +IVI+LI
Sbjct: 76 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLI 135
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DL +QR V EDA EFA+ +GLFF ETSAL NVE++F +L EI +++K++L
Sbjct: 136 GNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLE 195
Query: 189 AGEGQGNG--NPASLSGKKILVPGPAQ----EIPAKSSMCC 223
G+ N N A+L G KI V A+ E+ SS C
Sbjct: 196 CDNGKANADNNVATLKGSKIDVISGAELEIAEMKKLSSCSC 236
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 171/219 (78%), Gaps = 7/219 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGVEFQT+T+ I K +KAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIW 74
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAMLVYDI++RQ+FDH+ RW+EELRSHAD +IVI+LIGNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNK 134
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DL +QR V TEDA EFA+ +GLFF ETSA NV +AF+ +L EI +V+K++L
Sbjct: 135 GDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLECNN 194
Query: 192 G-QGNGNP--ASLSGKKILVPGPAQ----EIPAKSSMCC 223
G +GNGN A+L G+KI + ++ EI S C
Sbjct: 195 GIKGNGNHDVAALKGEKIDIISASELEISEIKKLHSCSC 233
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 169/209 (80%), Gaps = 3/209 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ KIDYVFKVV+IGDSAVGK+QIL+RFA+NEF DSKATIGVEFQTRT+ I K +KAQI
Sbjct: 21 HDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQI 80
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ RW+EELR+HAD +IVI+LIGN
Sbjct: 81 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGN 140
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI-FNIVNKKNLT- 188
K DL +QR V +EDA EFA+++GLFF ETSAL NVE+AF+ +L EI +V+K++L+
Sbjct: 141 KGDLVDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLSD 200
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIP 216
G+ SL G KI ++ GP EI
Sbjct: 201 CNHGKKTNGGNSLKGSKIDVISGPELEIT 229
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 168/209 (80%), Gaps = 3/209 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ KIDYVFKVV+IGDSAVGK+QIL+RFA+NEF DSKATIGVEFQTRT+ I K +KAQI
Sbjct: 21 HDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQI 80
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ RW+EELR+HAD +IVI+LIGN
Sbjct: 81 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGN 140
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI-FNIVNKKNLT- 188
K D +QR V +EDA EFA+++GLFF ETSAL NVE+AF+ +L EI +V+K++L+
Sbjct: 141 KGDFVDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLSD 200
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIP 216
G+ SL G KI ++ GP EI
Sbjct: 201 CNHGKKTNGGNSLKGSKIDVISGPELEIT 229
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 168/215 (78%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA GL F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEG-QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+G Q N +G I + PA + AK CC
Sbjct: 182 GDGAQANIG----AGTNISLSKPADDGSAKGGKCC 212
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 167/212 (78%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +F+++ RWL+ELR HAD+NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTEDAK+FA++ L F+ETSAL+ATNVE AF +LTEI+ IV+ KN G
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
N +LSG+ I + A + AKS C
Sbjct: 183 PSGSNEGHQNLSGQSISLSQTANDPQAKSGCC 214
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 167/213 (78%), Gaps = 3/213 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K++KAQ
Sbjct: 5 PDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ +F+++ RWL+ELR HAD NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL R+V TEDAK F ++EGL F+ETSALEATNVE AF +LTEI++IV+KK L +
Sbjct: 125 NKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALAS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+G A SG I V A E KS+ C
Sbjct: 185 EDGPA---AAPTSGTAIKVTEAAPEAKKKSTCC 214
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 170/220 (77%), Gaps = 12/220 (5%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRT+ + K++KAQ
Sbjct: 5 PDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ +++++ RWL+ELR HAD NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL+ R V T+DA+ F++KEGL F+ETSALEATNVE AF ++LTEI+ IV+KK L +
Sbjct: 125 NKSDLKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKALAS 184
Query: 190 GE----GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ G G G K ++ GP Q+ K CC T
Sbjct: 185 EDPVLVGPGEG--------KAIIVGPEQDANTKKKACCST 216
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 169/215 (78%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
G+G A++ +G I + PA + AKS CC
Sbjct: 182 GDGA----QATIGAGTNISLSKPADDESAKSGKCC 212
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 164/214 (76%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF LDSK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI+L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+V EDA+ A+KEGL FLETSALEA+NVE AF T+L +I+ I++KK LTA
Sbjct: 126 KSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKALTAQ 185
Query: 191 E-GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E G P G I + + I ++ CC
Sbjct: 186 EAANSTGLP---QGTTITIANLSSNINKRA--CC 214
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D + A+KEGL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E G P G I V + CC T
Sbjct: 186 EAAGTSLPG--QGTTINVADSSANTKRG---CCST 215
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 168/214 (78%), Gaps = 5/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 EGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
+G AS+ +G I + PA + KS CC
Sbjct: 183 DGA----QASIGTGPSIALSKPADDSAEKSGKCC 212
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 163/213 (76%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I K+VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LV+DI++RQ+FD++ RWL ELR HAD NIV++++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED++ F++KE L FLETSALEA NVE AF TVL+EI IV+KK L A
Sbjct: 126 KSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E + N S+ G I V P+ CC
Sbjct: 186 ES-ASANGRSMQGTTINVAEPSTNTKGS---CC 214
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 166/212 (78%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +F+++ RWL+ELR HAD+NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTEDAK+FA++ L F+ETSAL+ATNVE AF +LTEI+ IV+ KN G
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+LSG+ I + A + AKS C
Sbjct: 183 PSGSTEGHQNLSGQSISLSQTANDPQAKSGCC 214
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 164/215 (76%), Gaps = 4/215 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL + K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVILMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV ED + A++E L FLETSALEATNVE AF T+LTEI++I++KK L A
Sbjct: 126 KSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E GN ++L G+ + K S CC T
Sbjct: 186 EAAGN---STLPGQGTTINVADTSGNTKRS-CCST 216
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 174/214 (81%), Gaps = 6/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A++EGL F+ETSALEATNVE AF T+L+EI+ I++KK+LT+
Sbjct: 125 NKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLTS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E PA++ K++V G ++ K CC
Sbjct: 185 EEPA----PANIKEGKMIVVGGSEANTKKP--CC 212
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 169/214 (78%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +FD++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A+KEGL F+ETSALEATNVE AF T+L+EI+ I++KK+L +
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E N + K +V G ++ K+ CC
Sbjct: 185 EEPAAANN---IKEGKTIVVGESEANTKKA--CC 213
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 167/215 (77%), Gaps = 4/215 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++IDYVFKVV+IGDSAVGK+QIL+RF ++EF DSK+TIGVEFQTRT+ I+ K +KAQIW
Sbjct: 14 ERIDYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIW 73
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAML+YDI++R +FDH+ RW++ELR+HAD +IVI+LIGNK
Sbjct: 74 DTAGQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNK 133
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DL + RAVP EDA EFA+ +GLFF ETSA NV++AF +L EI++ V KK L G
Sbjct: 134 VDLVDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKALECGN 193
Query: 192 GQGN-GNPASLSGKKIL-VPGPAQEIP--AKSSMC 222
G N + +L G KI + G EI KSS C
Sbjct: 194 GNSNVADAITLKGSKIDGISGTDLEISEVKKSSAC 228
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 166/214 (77%), Gaps = 3/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+G N A +G + + PA E K CC
Sbjct: 182 GDG-AQANIA--AGTSLSLSKPADENADKGGKCC 212
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 169/214 (78%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +FD++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A+KEGL F+ETSALEATNVE AF T+L+EI+ I++KK+L +
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E N + K +V G ++ K+ CC
Sbjct: 185 EEPAAANN---IKEGKTIVVGESEANTKKA--CC 213
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 161/209 (77%), Gaps = 3/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 74 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 133
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 134 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 193
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K FA++E LFF+ETSALEATNVENAF VLT+I+NIV+KK L E Q
Sbjct: 194 RHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSKKALETSE-QA 252
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
NG+ G+KI V + K CC
Sbjct: 253 NGSAVPSQGEKIDVGKDVSAV--KRGGCC 279
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 167/215 (77%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV++K L
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 190 GE-GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GE Q N +G I + PA + AK CC
Sbjct: 182 GESAQANIG----AGTNISLSKPADDGAAKGGKCC 212
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 159/221 (71%), Gaps = 16/221 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL + K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV ED A+KEGL FLETSALEATN+E AF T+LTEI++I++KK L A
Sbjct: 126 KSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKTLAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
E N VPG I + CC T
Sbjct: 186 EAAANST----------VPGQGTTINVADASGNTKKGCCST 216
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/214 (63%), Positives = 165/214 (77%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I+ K++KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LV+DI++RQ+FD++ RWL ELR HAD NIV++++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED F++KEGL FLETSALEA NVE AF TVL+EI IV+KK L A
Sbjct: 126 KSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSS-MCC 223
E + N S+ G I V E PA + CC
Sbjct: 186 ES-ASTNGRSMQGTTINVA----EAPAATKGSCC 214
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 169/214 (78%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPAKSSMC 222
G+G A++ +G I + PA++ AKS C
Sbjct: 182 GDGA----QATIGAGTNISLSKPAEDATAKSGCC 211
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 170/214 (79%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A+KEGL F+ETSALEA NVE AF T+L+EI+ I++KK++++
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
Q N + G+ I V ++ K CC
Sbjct: 185 --DQTTANASIKEGQTIDVAATSESTAKKP--CC 214
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 156/188 (82%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I+ K++KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++Q+F++I RWL ELR HAD NIVI+++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED + A+KEGL FLETSALEA NVE AF TVL++I I++KK L A
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQ 185
Query: 191 EGQGNGNP 198
E G+G P
Sbjct: 186 EAAGSGPP 193
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/185 (68%), Positives = 154/185 (83%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ RAV ED + A+KEGL FLETSALEA N+E AF T+LTEI++I++KK L A
Sbjct: 126 KSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 191 EGQGN 195
E N
Sbjct: 186 EASSN 190
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 163/221 (73%), Gaps = 18/221 (8%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+V ED + A+KEGL FLETSALEATN+E AF T+L+EI++I++KK L A
Sbjct: 126 KSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
E GN +PG I S CC T
Sbjct: 186 EAAGN------------LPGQGTAINISDSSATNRKGCCST 214
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 160/213 (75%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TR L I K+VKAQI
Sbjct: 6 NNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++QSFD + RWL ELR HAD NIV++++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED + F++KEGL FLETSALEA NVE AF T+L+EI V+KK L A
Sbjct: 126 KSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKAL-AA 184
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ + N S+ G I V A+ CC
Sbjct: 185 QASASTNGRSMQGTTINV---AESSTVTKGSCC 214
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 163/213 (76%), Gaps = 3/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS++ ++D++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTEDAK FA + L F+ETSAL++TNVE AF T+LTEI+ IV+ K L G
Sbjct: 123 KSDLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALDGG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ P S + L P E K + CC
Sbjct: 183 DQHQVSQPGS---SQPLHITPTAENSTKDTKCC 212
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 168/215 (78%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
G+G A++ +G I + PA + +K CC
Sbjct: 182 GDGA----QATIGAGTNISLSKPADDDASKGGKCC 212
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 165/221 (74%), Gaps = 16/221 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++PRWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R++ ED + A+KEGL FLETSALEA+N+E AF ++L+EI++IV+KK L A
Sbjct: 126 KSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
E G+ + VPG I + CC T
Sbjct: 186 EAAGS----------MAVPGQGTAINISDTYATNRRGCCST 216
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 164/209 (78%), Gaps = 7/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TEDAK FA+ E L+F+ETSALE+TNVENAF VLT+I+++V+KK + AGE G
Sbjct: 131 RHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGEDSG 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N P+ G+KI V A K + CC
Sbjct: 191 NV-PS--KGEKIDVDVSA----VKKTGCC 212
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 169/214 (78%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A+KEGL F+ETSALEA NVE AF T+L+EI+ I++KK++++
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N N G+ I V ++ K CC
Sbjct: 185 DQASANANVK--EGQTIDVAASSESNTKKP--CC 214
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 170/214 (79%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A+KEGL F+ETSALEA NVE AF T+L+E++ I++KK++++
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N N G+ I V ++ K CC
Sbjct: 185 DQTTANANIK--EGQTIDVAATSESNAKKP--CC 214
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 167/213 (78%), Gaps = 5/213 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+RQ++D++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ A G KI + P+ AK + CC
Sbjct: 183 DAA----QAPTGGVKIDM-APSGTPDAKGNKCC 210
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 163/214 (76%), Gaps = 6/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRT+ ++ K++KAQ
Sbjct: 5 TDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +F+++ RWL+ELR HAD NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL+ R V TEDA+ FA+KEGL FLETSALEATNVE AF T+L EI I++KK L +
Sbjct: 125 NKSDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKALAS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E G G GK I+V P CC
Sbjct: 185 EEAAGAGIK---EGKTIVVADPDTNTK---KACC 212
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 156/188 (82%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I+ K++KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++Q+F++I RWL ELR HAD NIVI+++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED + A+KEGL FLETSALEA NVE AF T+L++I I++KK L A
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKALAAQ 185
Query: 191 EGQGNGNP 198
E G+G P
Sbjct: 186 EAAGSGPP 193
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 165/214 (77%), Gaps = 5/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AKEFA + GL F+ETSAL+A+NVE AF LTEI+ IV+ K + G
Sbjct: 123 KSDLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIEQG 182
Query: 191 E-GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E QG G S+ PG A +K CC
Sbjct: 183 EPSQGPGQGTSIPLGPSHPPGDA----SKKGQCC 212
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 163/213 (76%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV TEDA+ A++EGL FLETSALEA NVE AF T+L +I++I++KK L A
Sbjct: 126 KSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E N + G I V + +S CC
Sbjct: 186 E--ANSSTGLPQGTTINVSNMSSNAGNRS--CC 214
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/215 (60%), Positives = 167/215 (77%), Gaps = 7/215 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 EGQGNGNPASL--SGKKILVPGPAQEIPAKSSMCC 223
+G P + +G I + PA + KS CC
Sbjct: 183 DG-----PQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 168/211 (79%), Gaps = 3/211 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL+ RAV TEDA+ +A+KEGL F+ETSALEATNVENAF T+L EI+ I++KK+L++ +
Sbjct: 127 TDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSLSSND 186
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
N GK I V G + K S C
Sbjct: 187 PAAN---IIKEGKTITVGGAPEPNTNKPSCC 214
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 172/220 (78%), Gaps = 4/220 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ ++ IDY+FK+V+ GDS VGKSQ+L RF +NEF + SK TIGVEF TRT+V+ HK VK
Sbjct: 6 GNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVK 65
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERY+A+T+AYYRGA GA+L YDI+++Q+FDH+ +WL+ELR HADKNI+++L
Sbjct: 66 AQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVML 125
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPTE A++FAQ+EGLFFLETSAL+++NVE+AF+ +L++++ V++K++
Sbjct: 126 VGNKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI 185
Query: 188 TAGEGQGNGNPAS--LSGKKILVPG--PAQEIPAKSSMCC 223
+ N + + L G KI VP P + K CC
Sbjct: 186 LVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCC 225
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 155/188 (82%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I+ K++KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++Q+F++I RWL ELR HAD NIVI+++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED + A+KEGL FLETSALEA NVE AF T+L +I I++KK L A
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ 185
Query: 191 EGQGNGNP 198
E G+G P
Sbjct: 186 EAAGSGPP 193
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 160/213 (75%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TR L I K+VKAQI
Sbjct: 135 NNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQI 194
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++QSFD + RWL ELR HAD NIV++++GN
Sbjct: 195 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGN 254
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED + F++KEGL FLETSALEA NVE AF T+L+EI V+KK L A
Sbjct: 255 KSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKAL-AA 313
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ + N S+ G I V A+ CC
Sbjct: 314 QASASTNGRSMQGTTINV---AESSTVTKGSCC 343
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 164/213 (76%), Gaps = 3/213 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTEDAK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L
Sbjct: 122 NKSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
GE G NP ++++ Q+ K C
Sbjct: 182 GE--GGQNPLG-ERRQVVEISKTQDTETKQGCC 211
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 165/213 (77%), Gaps = 3/213 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
GEG G P + +K+L + + K C
Sbjct: 182 GEGSG---PVLGNDRKVLEISKSADAEQKKGCC 211
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 165/214 (77%), Gaps = 3/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ + +G I + PA + +K CC
Sbjct: 182 GD---SAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 161/221 (72%), Gaps = 16/221 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D ++KEGL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
E + VPG I + CC T
Sbjct: 186 EATAGAS----------VPGQGTTINVADTSGNTKKGCCST 216
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 164/209 (78%), Gaps = 7/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TEDAK FA+ E L+F+ETSALE+TNVENAF VLT+I+++V+KK + AG+ G
Sbjct: 131 RHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGQDSG 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N P+ G+KI V A K + CC
Sbjct: 191 NV-PS--KGEKIDVDVSA----VKKTGCC 212
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 169/214 (78%), Gaps = 6/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ FA+KEGL F+ETSALEATNVE AF T+L EI+ I++KK L++
Sbjct: 125 NKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ PA + K LV + K+ CC
Sbjct: 185 DDPA----PAGIKEGKTLVVDGSDTNTKKT--CC 212
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 3/212 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I+ K+VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LV+DI++RQ+FD++ RWL ELR HAD NIV++++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED++ F++KEGL FLETSALEA NVE AF TVL+EI IV+KK L A
Sbjct: 126 KSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAA- 184
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+ N S+ G I V P+ AK S C
Sbjct: 185 QESAAANGRSMQGTTINVAEPSTN--AKGSCC 214
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/181 (69%), Positives = 153/181 (84%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D + A++EGL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 E 191
E
Sbjct: 186 E 186
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 165/214 (77%), Gaps = 4/214 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV++K L G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 191 EGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+ + SG I L P P+ E CC
Sbjct: 183 D---SAQATIASGTNITLTPPPSDEAAKGGGKCC 213
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 162/213 (76%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAV EDA+ A+KEGL FLETSALEA NVE AF T+L +I++I++KK L A
Sbjct: 126 KADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E NP G I V + +S CC
Sbjct: 186 E--ATSNPGLPHGTTINVANISGNYNKRS--CC 214
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/181 (69%), Positives = 153/181 (84%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D + A++EGL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 E 191
E
Sbjct: 186 E 186
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/215 (62%), Positives = 164/215 (76%), Gaps = 4/215 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D + A++EGL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E G G G I V G A + CC T
Sbjct: 186 EA-GVGTTLPGQGTTINV-GDASGNTKRG--CCST 216
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 161/221 (72%), Gaps = 16/221 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK++LIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D A+K+GL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
E + VPG I + CC T
Sbjct: 186 EATAGAS----------VPGQGTTINVADTSGNTKKGCCST 216
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 172/220 (78%), Gaps = 4/220 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ ++ IDY+FK+V+ GDS VGKSQ+L RF +NEF + SK TIG+EF TRT+V+ HK VK
Sbjct: 6 GNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVK 65
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERY+A+T+AYYRGA GA+L YDI+++Q+FDH+ +WL+ELR HADKNI+++L
Sbjct: 66 AQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVML 125
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPTE A++FAQ+EGLFFLETSAL+++NVE+AF+ +L++++ V++K++
Sbjct: 126 VGNKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI 185
Query: 188 TAGEGQGNGNPAS--LSGKKILVPG--PAQEIPAKSSMCC 223
+ N + + L G KI VP P + K CC
Sbjct: 186 LVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCC 225
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 165/213 (77%), Gaps = 5/213 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA L F+ETSAL+A+NVE AF +LTEIF IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N LS +K++ Q+ P CC
Sbjct: 183 DSAQN----PLSDRKVVEITKTQD-PESKQGCC 210
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 130/215 (60%), Positives = 163/215 (75%), Gaps = 5/215 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K++KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++Q+F++I RWL ELR HAD NIVI+++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+V ED + A+KEGL FLETSALEA NVE AF TVL++I I++KK L A
Sbjct: 126 KSDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E G+G P G I + P+ CC +
Sbjct: 186 EAAGSGPPG--QGTTINIADPSANTKRG---CCSS 215
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 155/188 (82%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I+ +++KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++Q+F++I RWL ELR HAD NIVI+++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED + A+KEGL FLETSALEA NVE AF T+L +I I++KK L A
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ 185
Query: 191 EGQGNGNP 198
E G+G P
Sbjct: 186 EAAGSGPP 193
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 171/222 (77%), Gaps = 6/222 (2%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
GGY + + DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T+TL + K
Sbjct: 2 GGY-RTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
++LIGNKSDL AVPTED K FA++E L+F+ETSALEATNVENAF VLT+I+ IV+K
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180
Query: 185 KNLTAGE-GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + AG+ G +G P+ G+ I V + + K CC T
Sbjct: 181 RAVEAGDSGSSSGLPS--KGQTINVKEDSSVL--KRFGCCST 218
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 167/215 (77%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPT++AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
G+G A++ +G I + A + AK CC
Sbjct: 182 GDGA----QATIGAGTNISLSKAADDEAAKGGKCC 212
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 162/213 (76%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV TEDA+ A++EGL FLETSALEA NV+ AF T+L +I++I++KK L A
Sbjct: 126 KSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKALAAQ 185
Query: 191 EGQGN-GNPASLSGKKILVPGPAQEIPAKSSMC 222
E + G P G I V A S C
Sbjct: 186 EATSSTGLP---QGTTINVSNMAGNAGGNRSCC 215
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 171/220 (77%), Gaps = 5/220 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
GD ++ IDY+FKVV++GDS VGKSQ+L RF RNEF + SKATIGVEF T+T+V+ HK VK
Sbjct: 6 GDSDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVK 65
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERY+A+T+AYYRGA GA+L YDI+ RQSFDH+ +WL+ELR HAD NI+++L
Sbjct: 66 AQIWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-NIIVML 124
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVP E+AK+FA+++GLFF+ETSAL++ NVE+AF+ +L++I+ V KK++
Sbjct: 125 VGNKSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATVGKKHI 184
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM----CC 223
A + N + +L + I + +QE + + CC
Sbjct: 185 IAEGAELNWDKVNLELEGIKIKVSSQEAECQKAKRRFDCC 224
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 166/214 (77%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK FA + L F+ETSA +A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 EGQGNGNPA-SLSGKKILVPGPAQEIPAKSSMCC 223
+ P+ +G I + P ++ AK+ CC
Sbjct: 183 D-----TPSMPQTGTNIALSNPTEDSAAKNGKCC 211
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 166/215 (77%), Gaps = 7/215 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 EGQGNGNPASL--SGKKILVPGPAQEIPAKSSMCC 223
+G P + +G I + PA + K CC
Sbjct: 183 DG-----PQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 166/215 (77%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDA+ FA++E FF+ETSALE+ NVENAF VLT+I+++V+KK L
Sbjct: 126 NKADLRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKALEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K S CC
Sbjct: 186 GD-----DPAALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 165/214 (77%), Gaps = 4/214 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV++K L G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 191 EGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+ + SG I L P P+ E CC
Sbjct: 183 D---SAQATIGSGTNITLTPPPSDEAAKGGGKCC 213
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 166/213 (77%), Gaps = 5/213 (2%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQIW
Sbjct: 10 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 69
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+++ +FD++ RWL+ELR HAD NIVI+LIGNK
Sbjct: 70 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNK 129
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAG 190
+DL+ RAV TEDA+ +A+KEGL F+ETSALEATNVE AF T L EI+ I++KK+L TA
Sbjct: 130 TDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTAN 189
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E N GK I + G E + CC
Sbjct: 190 EPAAAANIK--EGKTIAIGGS--ETTNTNKPCC 218
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 169/222 (76%), Gaps = 6/222 (2%)
Query: 2 ASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 61
A+GGGY DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L +
Sbjct: 3 ANGGGY-RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
Query: 62 QHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK 121
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL ELR H D+
Sbjct: 62 DGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQ 121
Query: 122 NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
+IV++LIGNKSDL AV T+DAKE+A+ E ++F+ETSAL+ATNV+NAF VLT+I+ I
Sbjct: 122 SIVVMLIGNKSDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQI 181
Query: 182 VNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
V+KK + A E +G P G+KI V + K CC
Sbjct: 182 VSKKTVEALE-EGAAGPG--KGEKINVKDDVSAM--KRVGCC 218
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 164/213 (76%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV T+DA+ A++E L FLETSALEA NVE AF T+L +I+ I++KK L A
Sbjct: 126 KSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKALAA- 184
Query: 191 EGQGNGNPASL-SGKKILVPGPAQEIPAKSSMC 222
QG + SL G I V + + KS+ C
Sbjct: 185 --QGAASTTSLPHGTTINVSNMSGSVEKKSACC 215
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 166/218 (76%), Gaps = 13/218 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + +K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL--- 187
KSDL RAVPTE+AK+FA + GL F+ETSAL+A+NVE AF LTEI+ IV+ K L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALDQG 182
Query: 188 --TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
TAG QG+ P S S PG A K CC
Sbjct: 183 EQTAGPSQGSAIPLSSSTP----PGDA----TKKGQCC 212
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 162/214 (75%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDG 181
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ L ++ +V E P CC
Sbjct: 182 GD----AGQTVLGDRRDMVRIDESEDPKTKQGCC 211
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 171/214 (79%), Gaps = 10/214 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ +VKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL+ RAV TEDA+ +++KEGL F+ETSALEATNVE AF T+L EI+ I++KK+L++ E
Sbjct: 127 TDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKSLSSNE 186
Query: 192 GQGNGNPASLSGKK---ILVPGPAQEIPAKSSMC 222
PAS + K+ I V GP Q +K S C
Sbjct: 187 ------PASANIKESMTITVGGP-QSNASKPSCC 213
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 169/215 (78%), Gaps = 8/215 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 E-GQGNGNPASLSGKKILVP-GPAQEIPAKSSMCC 223
+ GQ A L ++ +V P+Q+ P CC
Sbjct: 183 DSGQ-----AGLGDRRPVVDINPSQD-PETKQGCC 211
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 165/214 (77%), Gaps = 3/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV++K L
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDQ 181
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GE NP + + + A + AK CC
Sbjct: 182 GESA--QNPIGGERRTLEITNSA-DTEAKQGKCC 212
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 159/213 (74%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK+VLIGDS VGKS I +RF RNEF L+SK+TIGVEF TR L I K+VKAQI
Sbjct: 6 NNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++QSFD + RWL ELR HAD NIV++++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VP ED + F++KEGL FLETSALEA NVE AF T+L+EI V+KK L A
Sbjct: 126 KSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKAL-AA 184
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ + N S+ G I V A+ CC
Sbjct: 185 QASASTNGRSMQGTTINV---AESSTVTKGSCC 214
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/181 (68%), Positives = 152/181 (83%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VL GDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D + A++EGL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 E 191
E
Sbjct: 186 E 186
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 163/211 (77%), Gaps = 3/211 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K FA+KE L+F+ETSALEATNVEN+F VLT+I++IV+KK + AG+G
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKAMEAGDGTA 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ G+KI V + K + CC +
Sbjct: 191 AASVPP-KGEKIDVSKDVSAV--KKAGCCSS 218
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 169/219 (77%), Gaps = 2/219 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + N+ DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ +VI K +
Sbjct: 4 YSEDNKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISR Q+F I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R VPT + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCR 224
+T+ E +PASLS GKK+++P + C R
Sbjct: 184 MTSQE-LNKQDPASLSNGKKVVIPSEGESKTGGGGCCSR 221
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 166/218 (76%), Gaps = 18/218 (8%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR+H D NIV++L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K +A+KE L+F+ETSALEATNVENAF VLT+I++IV+KK + EG
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTV---EGAE 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM-------CCRT 225
NGN + VP ++I K+ + CC +
Sbjct: 188 NGNAS--------VPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 163/216 (75%), Gaps = 10/216 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+F ++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL--- 187
KSDL RAVPT+DAK FA + GL F+ETSAL+A+NVE AF LTEI+ IV+ K L
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDQD 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
T+G G G LS PA E AK CC
Sbjct: 183 TSGPAPGQGTSIPLSAST-----PAGE--AKKGQCC 211
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 166/210 (79%), Gaps = 5/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +N F+LDSK+TIGVEF TRTL +++K +KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIWDTA 75
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD+++ +F+++ RWL+ELR HAD NIV++LIGNK+DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKTDL 135
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE-GQ 193
R+V EDA FA+ EGLFF+ETSAL+ATNVE AF TVL EI+ I++KK L++ E G
Sbjct: 136 RHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSEESGL 195
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+GN G+ I V A A +S CC
Sbjct: 196 GSGNLR--EGQSIQV--SATNSGALTSRCC 221
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 166/220 (75%), Gaps = 17/220 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV++LIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL AVPTED K FA++E L+F+ETSALEATNVENAF VL++I++IV+KK + AG
Sbjct: 127 KSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKKAVEAG 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAK--SSM-----CC 223
E SG VP Q I K SS+ CC
Sbjct: 187 E----------SGSSSAVPSIGQTINVKEDSSVFKRFGCC 216
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 164/214 (76%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GEG N L G++ ++ + CC
Sbjct: 182 GEGSQN----VLGGERKVLEISKSADAEQKKGCC 211
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL+ RAV TEDA+ +A+KEGL F+ETSALEATNVE AF T+L+EI+ IV+KK+L++
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSE 185
Query: 191 EGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
E PAS+ GK I+V GP P CC
Sbjct: 186 ESA----PASIKDGKTIVVGGPE---PDTKKTCC 212
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 163/214 (76%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RW+ ELR H D NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAVPTEDAK FA++E FF+ETSALEA NVE AF VLT+I+++V+KK L G
Sbjct: 126 KADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKALDIG 185
Query: 191 EGQGNGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+ +PA+ G+ I V G K S CC
Sbjct: 186 D-----DPAAPPRGQTISVGGKDDVSAVKKSACC 214
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 164/209 (78%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++RR +F+++ RWL+EL++H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AVPTED K +A++E L F+ETSALEATNVE+AF VLT+I+ I +KK + AGE
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGE--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+GN + G+KI V + K CC
Sbjct: 188 DGNASVPKGEKIEVKNDVSAL--KKLGCC 214
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 167/215 (77%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPT++AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
G+G A++ +G I + A + +K CC
Sbjct: 182 GDGA----QATIGAGTNISLSKAADDEASKGGKCC 212
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 167/217 (76%), Gaps = 14/217 (6%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 191 EGQGNGNPASLSGKKIL----VPGPAQEIPAKSSMCC 223
EG G+++L V P+++ + CC
Sbjct: 183 EG----------GQQVLDRRPVIDPSKQDSEQKQGCC 209
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/215 (60%), Positives = 169/215 (78%), Gaps = 8/215 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LD+K+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 E-GQGNGNPASLSGKKILVP-GPAQEIPAKSSMCC 223
+ GQ A L ++ +V P+Q+ P CC
Sbjct: 183 DSGQ-----AGLGDRRPVVDINPSQD-PETKQGCC 211
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 168/222 (75%), Gaps = 6/222 (2%)
Query: 2 ASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 61
A+GGGY DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L +
Sbjct: 3 ANGGGY-RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
Query: 62 QHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK 121
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL ELR H D+
Sbjct: 62 DGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQ 121
Query: 122 NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
+IV++L+GNKSDL AV T+DAKEFA+ E ++F+ETSAL+ATNV+++F VLT+I+ I
Sbjct: 122 SIVVMLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQI 181
Query: 182 VNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
V+KK + A E G A G+KI V + K CC
Sbjct: 182 VSKKTVEASE---EGAAAPGKGEKINVKDDVSAM--KRVGCC 218
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 164/209 (78%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++RR +F+++ RWL+EL++H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AVPTED K +A++E L F+ETSALEATNVE+AF VLT+I+ I +KK + AGE
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGE--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+GN + G+KI V + K CC
Sbjct: 188 DGNASVPKGEKIEVKNDVSAL--KKLGCC 214
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 165/218 (75%), Gaps = 18/218 (8%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR+H D NIV++L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K +A+KE L+F+ETSALEATNVENAF VLT+I+ IV+KK A EG
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKK---AVEGAE 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM-------CCRT 225
NGN + VP ++I K+ + CC +
Sbjct: 188 NGNAS--------VPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 166/215 (77%), Gaps = 8/215 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + +K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS++Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV T+DAK+FA + GL F+ETSAL+A+NVE AF L EI+ IV+ K L G
Sbjct: 123 KSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALDQG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA--KSSMCC 223
E P+ G+ +P +PA KS CC
Sbjct: 183 E------PSQGPGQGSAIPLGPSNMPADKKSGQCC 211
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 164/213 (76%), Gaps = 3/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQI
Sbjct: 6 DEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+R +++++ RWL+EL+ H D NIV++L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV TED + F+++EGL+F+ETSALE+TNVENAF +LT+I+ +V+KK L G
Sbjct: 126 KSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKALDVG 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E + + A G+ I V G K CC
Sbjct: 186 E---DPSAAPAKGQTINVGGKDDVTATKKVGCC 215
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 160/201 (79%), Gaps = 8/201 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV EDA+ A+KEGL FLETSALEA N+E AF ++L +I++I++KK L A
Sbjct: 126 KSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKALAAQ 185
Query: 191 EG-------QGNG-NPASLSG 203
E QG N A+LSG
Sbjct: 186 EAANSTGLPQGTTINVANLSG 206
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 167/217 (76%), Gaps = 14/217 (6%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 191 EGQGNGNPASLSGKKIL----VPGPAQEIPAKSSMCC 223
EG G+++L V P+++ + CC
Sbjct: 183 EG----------GQQVLDRRPVIDPSKQDSEQKPGCC 209
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 161/221 (72%), Gaps = 16/221 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL + K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ RAV ED A+KEGL FLETSALEATN+E AF T+LTEI++I++KK L A
Sbjct: 126 KSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA------KSSMCCRT 225
E N VPG I S CC T
Sbjct: 186 EAAANST----------VPGQGTTINVADASGNTSKGCCST 216
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 160/211 (75%), Gaps = 5/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI+R +F+++ RWL+ELR H + NIV++L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TEDA+ FA++EGL+F+ETSALE+TNVENAF VLT+I+ IV+KK L E
Sbjct: 130 RHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKALDVSEDNA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
P G+ I V K CC T
Sbjct: 190 AAPP---QGQTINVKDDV--TATKKVGCCST 215
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 163/210 (77%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TEDAK FA++E FF+ETSALE+ NVENAF VLT+I+ +V++K L G+
Sbjct: 131 RHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGD--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+PA+L + + G ++ A K CC
Sbjct: 188 --DPAALPKGQTINVGTKDDVSAVKKVGCC 215
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEFS++SK+TIGVEF TR++ + K +KAQ+WDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI+R +F+++ RWL+ELR H D N+VI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+A+ F+++E +FF+ETSAL+ATNVE AF VLT+I+ ++++K L G
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKAL-----DG 185
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+P SL + + G ++ A KSS CC
Sbjct: 186 TGDPMSLPKGQTIDIGNKDDVTAVKSSGCC 215
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 7/225 (3%)
Query: 1 MASGGGYG--DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRT 58
MA GGG G DY+FK V+IGDS VGKS +L+RF +NEF L+SK+TIGVEF TR+
Sbjct: 1 MAGGGGSGAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRS 60
Query: 59 LVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSH 118
L + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL+ELR H
Sbjct: 61 LQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDH 120
Query: 119 ADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
D +IV++L+GNKSDL AV TED +E+A+ E L+F+ETSAL+ATNV+NAF VLT+I
Sbjct: 121 TDPSIVVMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQI 180
Query: 179 FNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ I ++K + AGE +G+ A G+KI V + K CC
Sbjct: 181 YQIASRKTVDAGE---DGSAAPSKGEKINVKDDVSAL--KRVGCC 220
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 163/214 (76%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RW+ EL+ H D NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAVPTEDAK FA++E FF+ETSALEA NVE+AF VLT+I+ +V+KK L G
Sbjct: 126 KADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 191 EGQGNGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+ +PA+ G+ I V G K S CC
Sbjct: 186 D-----DPAAPPKGQTINVGGKDDVSAVKKSACC 214
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 166/219 (75%), Gaps = 5/219 (2%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
G DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K
Sbjct: 2 GTSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKV 61
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR+H D NIV+
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVV 121
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNKSDL AV TED K +A++E L+F+ETSALEATNVENAF VLT+I+ IV+KK
Sbjct: 122 MLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKK 181
Query: 186 NLTAG-EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ G EG + PA G++I V A + K CC
Sbjct: 182 SVEGGDEGAASSVPA--KGERINVKDDASAL--KRVGCC 216
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E FF+ETSALE+ NVENAF VLT+I+ +V++K L
Sbjct: 126 NKADLRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDV 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ +PA+L + + G K CC
Sbjct: 186 GD-----DPAALPKGQTINVGKDDVSAVKKVGCC 214
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 9/216 (4%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++K+Q
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+S+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEIF IV+ K L +
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALES 181
Query: 190 GEGQGNGNPASLSGKKI--LVPGPAQEIPAKSSMCC 223
G+ N L +K+ + P E K CC
Sbjct: 182 GDSSAN----QLGDRKVVEITKTPDSE---KKQGCC 210
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 6/212 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYD++R +F+++ RW+ EL+ H D NIVI+L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TEDAK FA+KE FF+ETSALE+ NVENAF VLT+I+++V+KK L G+
Sbjct: 130 RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGD--- 186
Query: 195 NGNPAS-LSGKKILVPGPAQEIPAKSSMCCRT 225
+PA+ G+ I V G K S CC +
Sbjct: 187 --DPAAPPKGQTINVGGKDDVSAVKKSACCSS 216
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 171/211 (81%), Gaps = 8/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR+L I K+VKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+ Q++ ++ RWL+ELR HAD+NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAVPT++AK F+ + GL F+ETSAL+A+NVE+AF T+LT+I+ IV+ K+L +
Sbjct: 128 KHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL-----EQ 182
Query: 195 NGNPASLS-GKKILVPGPAQEIPAKS-SMCC 223
+ +P S G ILV P+ + A+S S CC
Sbjct: 183 SADPIKPSTGDNILVT-PSVDPQAQSGSKCC 212
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 163/209 (77%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRT + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++RR +F+++ RWL+EL++H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AVPTED K +A++E L F+ETSALEATNVE+AF VLT+I+ I +KK + AGE
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGE--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+GN + G+KI V + K CC
Sbjct: 188 DGNASVPKGEKIEVKNDVSAL--KKLGCC 214
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 167/213 (78%), Gaps = 3/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++ + K++KAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+++SF + +WL+ELR HAD NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ RAV TE+ KEFA+K L F+ETSAL+ATNVE AF +LTEI+ IV+KK LT
Sbjct: 125 KSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALT-N 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E + PA G+ ++V PA++ CC
Sbjct: 184 EKNPSFKPA--LGESVVVRDPAEDKGTHKKKCC 214
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 163/216 (75%), Gaps = 18/216 (8%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR+H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K +A+KE L+F+ETSALEATNVENAF VLT+I+ IV+KK A EG
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKK---AVEGAE 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM-------CC 223
NG + VP ++I K+ + CC
Sbjct: 188 NGTAS--------VPAKGEKIDLKNDVSALKRVGCC 215
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + +K++K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT+++K FA++ L F+ETSAL++TNVE AF+ +LTEI+ IV++KN+
Sbjct: 122 VGNKSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
G G G +P+S K I +P CC++
Sbjct: 182 RDG-GNGEDSPSS-DVKPITIPPTHGYTEPNKRKCCQS 217
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 162/210 (77%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TEDA+ FA+KE FF+ETSALE+ NVENAF VLT+I+ +V +K L GE
Sbjct: 131 RHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGE--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+PA+L + + G ++ A K CC
Sbjct: 188 --DPAALPKGQTINVGNKDDVSAMKKVGCC 215
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 165/211 (78%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG-EGQ 193
AV TED K FA++E L+F+ETSALEATNV+NAF VLT+I+ IV+KK + G EG
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGDEGA 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+ P+ G+KI V ++++ A K CC
Sbjct: 191 ASAVPS--KGEKIDV---SKDVSAMKRVGCC 216
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 162/209 (77%), Gaps = 4/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R+ +F+++ RWL+ELR+H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K +A+KE L+F+ETSALEATNVENAF VLT+I++IV+KK + E
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEVAENGT 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
PA G+KI + + K CC
Sbjct: 191 TSVPA--KGEKIDLKNDVSAL--KRVGCC 215
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 165/215 (76%), Gaps = 9/215 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD+S+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEIF IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESG 182
Query: 191 EGQGNGNPASLSGKKI--LVPGPAQEIPAKSSMCC 223
+ N L +K+ + P E K CC
Sbjct: 183 DSSAN----QLGDRKVVEITKTPDSE---KKPGCC 210
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 163/210 (77%), Gaps = 5/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K FA++E L+F+ETSALEATNV+NAF VLT+I+ IV+KK + AG+ G
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEAGD-DG 189
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+ G+KI V +++ A K CC
Sbjct: 190 AASAVPSKGEKIDV---GKDVSAMKRVGCC 216
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 162/217 (74%), Gaps = 13/217 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + D++FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRT+ + K++KAQI
Sbjct: 6 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +FD++ RWL ELR HAD NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK----N 186
KSDL RAVP +DA++FA+KEGL F+ETSALE+TNVE +F ++LTEI+ IV +K
Sbjct: 126 KSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAE 185
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A G G P ++S E AK CC
Sbjct: 186 EAASAGPSQGTPINVSD---------AETIAKKRSCC 213
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 166/213 (77%), Gaps = 7/213 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAGEGQ 193
AV TED K FA+KE L+F+ETSALEATNVE AF VLT+I+NIV+KK + T+ +G
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSDDGA 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPA-KSSMCCRT 225
+ P+ G+KI V +++ A K CC +
Sbjct: 191 ASAVPS--KGEKIDV---GKDVSAMKKGGCCSS 218
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 165/222 (74%), Gaps = 6/222 (2%)
Query: 2 ASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 61
A+ GGY DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L +
Sbjct: 3 AAAGGY-RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
Query: 62 QHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK 121
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL ELR H D
Sbjct: 62 DGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDP 121
Query: 122 NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
+IV +LIGNKSDL AV TED KEFA+ E ++F+ETSAL+ATNV+NAF VLT+I+ I
Sbjct: 122 SIVCMLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQI 181
Query: 182 VNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
VNKK + A E G+ P G+KI V + K CC
Sbjct: 182 VNKKPVEAPE-DGSAGPG--KGEKINVKDDVSAM--KRVGCC 218
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 165/215 (76%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV T+DAK FA++E FF+ETSALE+ NV+NAF VLT+I+ +V++K L
Sbjct: 126 NKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K S CC
Sbjct: 186 GD-----DPAALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/220 (57%), Positives = 170/220 (77%), Gaps = 1/220 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + + DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 4 YNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEV 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R VPT + K A+ +GLFF+ETSAL+++NV +AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM-CCRT 225
+ + E + P + +GK +++ +E+ +S CC +
Sbjct: 184 MMSQELKKQDTPWTENGKTVVLQEGDREVEVESKKGCCSS 223
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR+H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG-EGQ 193
AV TED K +A++E L+F+ETSALEATNVENAF VLT+I+ IV+KK++ G EG
Sbjct: 131 RHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEGA 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ PA G++I V A + K CC
Sbjct: 191 ASSVPA--KGERINVKDDASAL--KRVGCC 216
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 165/222 (74%), Gaps = 6/222 (2%)
Query: 2 ASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 61
A+ GGY DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L +
Sbjct: 3 AAAGGY-RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
Query: 62 QHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK 121
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL ELR H D
Sbjct: 62 DGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDP 121
Query: 122 NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
+IV +LIGNKSDL AV TED KEFA+ E ++F+ETSAL+ATNV+NAF VLT+I+ I
Sbjct: 122 SIVCMLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQI 181
Query: 182 VNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
VNKK + A E G+ P G+KI V + K CC
Sbjct: 182 VNKKPVEAPE-DGSAGPG--KGEKINVKDDVSAM--KRVGCC 218
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 168/213 (78%), Gaps = 10/213 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FKVVLIGDS VGKS +L+RF RNEF+++SK+TIGVEF TR++V+ K++KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS++QS+ H+ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAGEGQ 193
RAVPTE+AK FA + L F+ETSA++A+NVE+AF +LT+I+ IV+ K L ++G+
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSGDSV 187
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSSM---CC 223
G P SG I V P + AKS+ CC
Sbjct: 188 G---PT--SGSTITVT-PTADDGAKSNAGGKCC 214
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 163/216 (75%), Gaps = 8/216 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + +K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+L YD+++ Q+FD++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPT+DAK FA + GL F+ETSAL+A+NVE AF LTEI+ IV+ K L
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDND 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIP---AKSSMCC 223
G G P G+ +P + P AK CC
Sbjct: 183 AGSA-GAP----GQGTSIPLSSSNPPGGDAKKGQCC 213
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 166/223 (74%), Gaps = 5/223 (2%)
Query: 3 SGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 62
SGGG DY+FK V+IGDS VGKS +L+RF +NEF L+SK+TIGVEF TR+L +
Sbjct: 4 SGGGAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVD 63
Query: 63 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKN 122
K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL+ELR H D +
Sbjct: 64 GKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSS 123
Query: 123 IVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
IV++L+GNKSDL AV TED +E+A+ E L+F+ETSAL+ATNV+NAF VLT+I+ I
Sbjct: 124 IVVMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIA 183
Query: 183 NKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
++K + AG+ +G+ A G+ I V + K + CC +
Sbjct: 184 SRKTVDAGD---DGSSAPSKGENINVKDDVSSL--KRAGCCSS 221
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 166/213 (77%), Gaps = 7/213 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAGEGQ 193
AV TED K FA+KE L+F+ETSALEATNVE AF VLT+I+N+V+KK + T+ +G
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSKKAMETSDDGA 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPA-KSSMCCRT 225
+ P+ G+KI V +++ A K CC +
Sbjct: 191 ASAVPS--KGEKIDV---GKDVSAMKKGGCCSS 218
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 166/218 (76%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
GD Q DY+FK+VLIGDS+VGKS +LARFARNEF +SK+TIGVEFQT+ LVI K +K
Sbjct: 5 GDDGQSQDYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD + RWL EL +H+D N+V IL
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTIL 124
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL+ R V T + + A+ +GLFF+ETSAL+++NV AF TV+ EI++I+++K
Sbjct: 125 VGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVF 184
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ E + + + SGK +++ G A + + CC +
Sbjct: 185 QSLEQKKSELQSLSSGKAVVLQGEANQTSSGGRWCCSS 222
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 164/219 (74%), Gaps = 16/219 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL--- 187
KSDL+ R VPT+DA+ F++KEGL F+ETSALE+TNVE AF +LTEI+ IV+KK L
Sbjct: 126 KSDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 188 ---TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
T G GQG +VP + K CC
Sbjct: 186 ESTTEGPGQGTN----------IVPLDSNSPDLKKKGCC 214
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 169/210 (80%), Gaps = 5/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAV T++AK+FA + GL F+ETSAL+A+NVE+AF +LT+I+ IV+ K+L E G
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL---ESSG 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAK-SSMCC 223
+ S G+ ILV A + AK SS CC
Sbjct: 185 DVIKPS-GGETILVAPTADDGGAKSSSKCC 213
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 164/209 (78%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV T++ K FA++E L+F+ETSALE+TNVENAF VLT+I+ IV+K+++ AG+ G
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAG 191
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G P G+KI + + K CC
Sbjct: 192 SG-PG--KGEKINIKDDVSAV--KKGGCC 215
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 164/209 (78%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV T++ K FA++E L+F+ETSALE+TNVENAF VLT+I+ IV+K+++ AG+ G
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAG 191
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G P G+KI + + K CC
Sbjct: 192 SG-PG--KGEKINIKDDVSAV--KKGGCC 215
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 166/220 (75%), Gaps = 17/220 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV++LIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL AVPTED K FA+KE L+F+ETSALEATNVENAF VL++I+ IV+K+ + AG
Sbjct: 127 KSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVEAG 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAK--SSM-----CC 223
+ AS S VP Q I K SS+ CC
Sbjct: 187 KN------ASSSA----VPSKGQTINVKDDSSVLKKIGCC 216
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/235 (55%), Positives = 170/235 (72%), Gaps = 14/235 (5%)
Query: 2 ASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 61
A+ G G+ +IDYVFKVV++GDSAVGK+Q+L RFA++EF LDSK+TIGVEFQTRTL +
Sbjct: 10 AAAGWEGEKEGEIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTL 69
Query: 62 QHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK 121
K VKAQIWDTAGQERYRAVTSAYYRGA+GAM+VYD++RR +FDH+PRW+EELR+HAD
Sbjct: 70 HRKRVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADG 129
Query: 122 NIVIILIGNKSDL-EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+ V+ L+GNK+D +R VP ++A FA+++GLFF E SAL NVE AF+ +L E+F
Sbjct: 130 STVVALVGNKADAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFA 189
Query: 181 IVNKKNLTA--------GEGQGN-GNPASLSGKKILVPGPAQEIPA----KSSMC 222
+V+++ L G+G G+ G SL G + + P E A SS C
Sbjct: 190 VVSRRALELDEARRTRNGDGDGDRGQALSLRGTTVDLHDPIMETSAMKKTASSQC 244
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 169/210 (80%), Gaps = 5/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAV T++AK+FA + GL F+ETSAL+A+NVE+AF +LT+I+ IV+ K+L E G
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL---ESSG 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAKS-SMCC 223
+ S G+ ILV A + AKS S CC
Sbjct: 185 DVIKPS-GGETILVAPTADDGGAKSGSKCC 213
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 161/217 (74%), Gaps = 13/217 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + D++FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRT+ + K++KAQI
Sbjct: 6 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +FD++ RWL ELR HAD NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK----N 186
KSDL RAVP +DA++FA+KEGL F+ETSALE+TNVE +F ++LTEI+ IV +K
Sbjct: 126 KSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAE 185
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A G G P + S E AK CC
Sbjct: 186 EAASAGPSQGTPINASD---------AETIAKKRSCC 213
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L ++ K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSFD++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAV ++ K A+KEGLFFLETSA+EA NVE AF T++TE++ IVN+K L
Sbjct: 123 VGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A E P GK I + A CC
Sbjct: 183 AAKEAAAASAPLPSQGKTISIDSAAGNTK---RACC 215
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/215 (60%), Positives = 163/215 (75%), Gaps = 5/215 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +DA+ A+KEGL FLETSALEA NVE AF T+L +I++I++KK L A
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E P G I V + + ++ CC T
Sbjct: 186 EAASINLP---HGTTINVGDLSGNMNKRT--CCST 215
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 166/209 (79%), Gaps = 1/209 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +++H+ RWL+ELR HAD +IVI+L+GNK+DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLVGNKNDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK FA+K L F+ETSAL++TNVE+AF +LT+I++IV++K + A +G
Sbjct: 129 RHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQM-ANDGDA 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ K + P +++ P S CC
Sbjct: 188 DIAALKNENKITIPPNESRKDPPASKKCC 216
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 164/214 (76%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS GKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL-- 179
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
EG+ G AS+ ++ ++ + CC
Sbjct: 180 -EGESGG--ASVGERRQIIDIEKTQDTENKGGCC 210
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 171/220 (77%), Gaps = 3/220 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + ++ DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 YSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+F I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCRT 225
+++ E +PASLS GKK+++P Q +K CC +
Sbjct: 184 MSSQE-LNKQDPASLSNGKKVVIPSDGQG-ESKKGGCCSS 221
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 164/220 (74%), Gaps = 6/220 (2%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
GGY DY+FK+VLIGDS VGKS +L+RF+RNEF+L+SK+TIGVEF TR++ +
Sbjct: 2 AGGYR-AEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDD 60
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI+R +F+++ RWL+ELR H D+NI
Sbjct: 61 KIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNI 120
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+L+GNK+DL RAV TEDAK FA++E FF+ETSALE+ NVENAF VLTEI+ +V
Sbjct: 121 VIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVC 180
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+K L G+ +PA+L + + G K CC
Sbjct: 181 RKALEVGD-----DPAALPKGQTINVGKDDVSAVKKVGCC 215
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 164/215 (76%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+ +G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E FF+ETSALE+ NVENAF VL++I+ +V++K L
Sbjct: 126 NKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K CC
Sbjct: 186 GD-----DPAALPKGQTINVGSKDDVSAVKKVGCC 215
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 164/218 (75%), Gaps = 18/218 (8%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +K+QIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKSQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGA+GA+LVYD++R +F+++ RWL+ELR+H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K + +KE L+F+ETSALEA+NVENAF VLT+I+N+V+KK A EG
Sbjct: 131 RHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSKK---AVEGAE 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM-------CCRT 225
NG + VP ++I K+ + CC T
Sbjct: 188 NGTAS--------VPAKGEKIDLKNDVSALKRVGCCST 217
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 163/210 (77%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV T DAK FA++E FF+ETSALE+ NV+NAF VLT+I+ +V++K L G+
Sbjct: 131 RHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGD--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+PA+L + + G ++ A K S CC
Sbjct: 188 --DPAALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 169/217 (77%), Gaps = 5/217 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL FLETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ E Q + S + I VP P + P CC+
Sbjct: 182 S--ERQESDMSPSNNVVNIQVP-PTENKPKMQ--CCQ 213
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 160/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV ED K FA++E +F+ETSALE+TNVENAF VL++I+ IV+KK L GE
Sbjct: 130 RHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGE--- 186
Query: 195 NGNPASL--SGKKILVPGPAQEIPAKSSMCC 223
+PA++ G+ I V K CC
Sbjct: 187 --DPAAVPSKGQTIHVGNKDDVTAMKKVGCC 215
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 163/223 (73%), Gaps = 12/223 (5%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TRT+
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPTE+AK FA + L F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 ANIVIMLVGNKSDLKHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
IV+ K L + + +P + PA S CC
Sbjct: 174 IVSSKTL-----EQSSDPIKAPTSDTIPVAIDSAAPASGSKCC 211
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 166/223 (74%), Gaps = 5/223 (2%)
Query: 3 SGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 62
SGGG DY+FK V+IGDS VGKS +L+RF +NEF L+SK+TIGVEF TR+L +
Sbjct: 4 SGGGAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVD 63
Query: 63 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKN 122
K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL+ELR H D +
Sbjct: 64 GKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPS 123
Query: 123 IVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
IV++L+GNKSDL AV TED +E+A+ E L+F+ETSAL+ATNV+NAF VLT+I+ I
Sbjct: 124 IVVMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIA 183
Query: 183 NKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
++K + AG+ +G+ A G+ I V + K + CC +
Sbjct: 184 SRKTVDAGD---DGSSAPSKGENINVKDDVSSL--KRAGCCSS 221
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV EDAK FA++E FF+ETSALEA NVENAF VLT+I+ +V+KK L G+
Sbjct: 130 RHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKALDIGD--- 186
Query: 195 NGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+PA+ G+ I V G K + CC
Sbjct: 187 --DPAAPPRGQTINVGGKDDVSAVKKAGCC 214
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 165/220 (75%), Gaps = 17/220 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+V IGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K +KAQI
Sbjct: 7 DDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV++LIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL AVPTED K FA+KE L+F+ETSALEATNVENAF VL++I+ IV+K+ + A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEA- 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAK--SSM-----CC 223
GN AS S VP Q I K SS+ CC
Sbjct: 186 -----GNNASSSA----VPSKGQTINVKDDSSVLKKIGCC 216
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 161/213 (75%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRT+ ++ K+VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL ELR HAD NIVI+L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV ++DA+ A+KE L FLETSALEA NVE AF T+L +I+ I++KK L A
Sbjct: 126 KSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E + G I V + + KS CC
Sbjct: 186 ESASTTSVP--HGTTINVSNMSGTVEKKS--CC 214
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 165/215 (76%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ +WL+ELR H D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV T+DAK FA++E FF+ETSALE+ NV+NAF VLT+I+ +V++K L
Sbjct: 126 NKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K S CC
Sbjct: 186 GD-----DPAALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 165/211 (78%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI+R +F+++ RWL+EL+ H D NIV++L+GNKS L
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSVL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV +D + F++KEGLFF+ETSALE+TNVENAF +LT+I+ +V+KK L GE
Sbjct: 130 RHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKALDVGE--- 186
Query: 195 NGNPASLSGK-KILVPGPAQEIPA-KSSMCC 223
+P+++ GK + + G ++ A K CC
Sbjct: 187 --DPSAVPGKGQTISVGNKDDVTATKKVGCC 215
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+ +G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E FF+ETSALE+ NVENAF VL++I+ +V++K L
Sbjct: 126 NKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K CC
Sbjct: 186 GD-----DPAALPKGQTINVGSKDDVSAVKKVGCC 215
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 162/210 (77%), Gaps = 5/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K FA++E L+F+ETSALEATNV+NAF VL +I++IV+KK + G+
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGDNAA 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM-CC 223
S G+KI V +++ AK + CC
Sbjct: 191 ASAVPS-KGEKIDVN---KDVSAKKRVGCC 216
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 163/215 (75%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TED+ FA++E FF+ETSALE+ NVENAF VLT+I+ +V+KK L
Sbjct: 126 NKADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +P +L + + G ++ A K S CC
Sbjct: 186 GD-----DPTALPKGQTIDVGSRDDVSAVKKSGCC 215
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 167/222 (75%), Gaps = 6/222 (2%)
Query: 2 ASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 61
A+GGGY DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L +
Sbjct: 3 ANGGGY-RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
Query: 62 QHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK 121
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL ELR H D+
Sbjct: 62 DGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQ 121
Query: 122 NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
+IV++L+GNKSDL AV T+DAKEFA+ E ++F+ETSAL+ATNV+++F VLT+I+ I
Sbjct: 122 SIVVMLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQI 181
Query: 182 VNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
V+KK + E G A G+KI V + K CC
Sbjct: 182 VSKKTVEVPE---EGAVAPGKGEKINVKDDVSAM--KRVGCC 218
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RW+ ELR H D NIV++L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAVPTEDAK FA+++ FF+ETSALEA NVE+AF VL +I+ +V+KK L G
Sbjct: 126 KADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKALDIG 185
Query: 191 EGQGNGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+ +PA+ G I V G K S CC
Sbjct: 186 D-----DPAAPPRGHTINVGGKDDVSAVKKSACC 214
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 161/214 (75%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI+L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMLAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL R+V EDA+ A+KE L LETSALEA+NVE AF T+L +I+ I++KK L A
Sbjct: 126 KTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKALAAQ 185
Query: 191 E-GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E G P G I + + I K+ CC
Sbjct: 186 EAANSTGLP---QGTTINIGNLSTNINKKA--CC 214
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 163/208 (78%), Gaps = 5/208 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI+++ +F+++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R+V T+D++ F +KEGL F+ETSALE+TNVE AF +LTEI++IV+KK L + +
Sbjct: 130 RHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKALASED--- 186
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMC 222
P G +I+V E KS+ C
Sbjct: 187 --KPQPDKGTRIVVSETQPEEKKKSACC 212
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 162/209 (77%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV T++ K FA++E L+F+ETSALE+TNVENAF VLT+I+ IV+K+ + AGE
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRAVEAGEDAA 191
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G P G+KI + + K CC
Sbjct: 192 SG-PG--KGEKINIKDDVSAV--KKGGCC 215
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 149/175 (85%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+Q+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRT ++ K++KAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
KSDL R+V ED + A+KEGL FLETSALEATNVE AF T+L EI++I++KK
Sbjct: 126 KSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 163/219 (74%), Gaps = 16/219 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK----- 185
KSDL+ R V T+DA+ F++KEGL F+ETSALE+TNVE AF +LTEI+ IV+KK
Sbjct: 126 KSDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 186 -NLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N T G GQG +VP + K CC
Sbjct: 186 ENTTEGPGQGTN----------IVPLDSNAPDLKKKGCC 214
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 166/213 (77%), Gaps = 7/213 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAGEGQ 193
AV TED K FA+KE L+F+ETSALEATNVE +F VLT+I+N+++KK + T+ +G
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAMETSDDGA 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPA-KSSMCCRT 225
+ P+ G+KI V +++ A K CC +
Sbjct: 191 ASAVPS--KGEKIDV---GKDVSAMKKGGCCSS 218
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 170/220 (77%), Gaps = 3/220 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + ++ DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 YSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+F I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCRT 225
+++ E +PASLS GKK+++P Q K CC +
Sbjct: 184 MSSQE-LNKQDPASLSNGKKVVIPSDGQG-EFKKGGCCSS 221
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 153/188 (81%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +DA+ A+KEGL FLETSALEA NVE AF T+L +I++I++KK L A
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 191 EGQGNGNP 198
E P
Sbjct: 186 EAASINLP 193
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 169/223 (75%), Gaps = 11/223 (4%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G + DY+FKVVLIGDS VGKS +L+RF RNEF+L++K+TIGVEF TRT+
Sbjct: 1 MAEGSNF-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIS 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K++KAQIWDTAGQERYRA+T+AYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPTE+AK F+ + GL F+ETSAL+A+NVE+AF T+LT+IF
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
IV+ K+L E G+ S SG + V A++S CC
Sbjct: 174 IVSNKSL---EPSGDAIKPS-SGDTLTVSPSVDTSNAQASKCC 212
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 163/215 (75%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RA+ EDA FAQ++ FF+ETSALE+ NVENAF VLT+I+ +V++K L
Sbjct: 126 NKADLRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K + CC
Sbjct: 186 GD-----DPAALPRGQTINVGSRDDVSAVKKAGCC 215
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL EL+ H D NIVI+L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGNKADL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV +EDAK FA++E FF+ETSALEA NVE+AF VL++I+ +V+KK L G+
Sbjct: 130 RHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKALDIGD--- 186
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+PA+ K + G ++ A K S CC
Sbjct: 187 --DPAAPPKGKTISVGSKDDVSAVKKSACC 214
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 171/220 (77%), Gaps = 3/220 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
+ + ++ DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 HSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISR+Q+F I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL+ R VPT + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCRT 225
+++ E +PASLS GKK+++P Q +K CC T
Sbjct: 184 MSSQE-LNKQDPASLSNGKKVVIPSEEQG-ESKKGGCCST 221
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 171/218 (78%), Gaps = 3/218 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
+ + ++ DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 HSEDDRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISR+Q+F I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R VPT + K A+ +GLFF+ETSA +++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCC 223
+++ E +PASLS GKK+++P AQ AK CC
Sbjct: 184 MSSQE-LNKQDPASLSNGKKVVIPSEAQG-EAKKGGCC 219
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 160/218 (73%), Gaps = 3/218 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L I K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAV A+LVYDI++RQSFD++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RA+ ++ K A+KEGLFFLETSA+EA NVE AF T++TE++ IVN+K L
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A E P GK I + A CC T
Sbjct: 183 AAKEAAATAAPLPSQGKTISIDSNAGNTK---KACCST 217
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 163/214 (76%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV T+DAK FA++E FF+ETSALE+ NV+NAF VLT+I+ +V+KK L
Sbjct: 126 NKADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSKKTLEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ +PA+L + + G ++ A + C
Sbjct: 186 GD-----DPAALPKGQTINVGSKDDVSAVKKVGC 214
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 162/210 (77%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TED+ FA++E FF+ETSALE+ NVENAF VLT+I+ +V+KK L G+
Sbjct: 131 RHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGD--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+PA+L + + G ++ A K S CC
Sbjct: 188 --DPAALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 163/219 (74%), Gaps = 16/219 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK----- 185
KSDL+ R V T+DA+ F++KEGL F+ETSALE+TNVE AF +LTEI+ IV+KK
Sbjct: 126 KSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 186 -NLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N T G GQG +VP + K CC
Sbjct: 186 ENTTEGPGQGTN----------IVPLDSNAPDLKKKGCC 214
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 166/213 (77%), Gaps = 7/213 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAGEGQ 193
AV TED K FA+KE L+F+ETSALEATNVE AF VLT+++N+V+KK + T+ +G
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSKKAMETSDDGA 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPA-KSSMCCRT 225
+ P+ G+KI V +++ A K CC +
Sbjct: 191 ASAVPS--KGEKIDV---GKDVSAMKKGGCCSS 218
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/174 (70%), Positives = 147/174 (84%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 7 QDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+DL R+V ED + A+ EGL FLETSALEATNVE AF TVL EI++I++KK
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 161/213 (75%), Gaps = 4/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK FA + L F+ETSA +A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ Q G I + A + + CC
Sbjct: 183 DAQA----IPQGGTTIPLSKTADDGAGQGGKCC 211
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 171/221 (77%), Gaps = 2/221 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + ++ DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 YSEDDKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD + RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R VPT + K+ A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPA-QEIPAKSSM-CCRT 225
+ + E G P +GK +++ G QE A++ CC +
Sbjct: 184 ILSQELNKPGAPELGNGKTVVLQGDGNQEGNAETKKGCCSS 224
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FK+VLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDA FA++E FF+ETSALE+ NVENAF VLT+I +V++K L
Sbjct: 126 NKADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDV 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ +PA+L + + G K CC
Sbjct: 186 GD-----DPAALPKGQTITVGKDDVSAVKKVGCC 214
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGD+ VGKS IL+RF RN FSLDSK+TIGVEF T++L ++ K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSFD++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAV ++ K A+KEGLFFLETSA+EA NVE AF T++TE++ IVN+K L
Sbjct: 123 VGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A E P GK I + A CC
Sbjct: 183 AAKEAAAASRPLPSQGKTISIDSAAGNTK---RACC 215
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE+AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + +P+ + K I + P + CC+T
Sbjct: 182 -RNDTDNDPSPSGDNVKPISI-APTDSSDTRKKQCCQT 217
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 164/213 (76%), Gaps = 2/213 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K++KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+T+AYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 64 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTEDA+ +A+++ L F+ETSAL++TNVE AF +LTEI+ IV++K L G
Sbjct: 124 KSDLRHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQL--G 181
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G+ I VP K S CC
Sbjct: 182 DSDRGGDLPDNDVVDIHVPDSTPGNQRKKSGCC 214
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 164/222 (73%), Gaps = 18/222 (8%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ DY+FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TRT+ + K+VK
Sbjct: 3 GEAAVSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ +FD++ RWL+ELR HAD NIVI+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIML 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL+ RAV T+ A+ FA++ L F+ETSAL+A+NVE AF ++LT+I+ IV+ K L
Sbjct: 123 VGNKSDLKHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPA------KSSMCC 223
+G G L PGP + I K+ CC
Sbjct: 183 DQNQGPG------------LTPGPRETITVSKSEEKKNGGCC 212
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 166/216 (76%), Gaps = 1/216 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K GL F+ETSAL++TNVE AF +LTEI++IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+P++ + + I V + K CC
Sbjct: 182 HDSPSSDGSHPSN-NVQTIHVAPTTDDDRKKRVQCC 216
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/223 (58%), Positives = 167/223 (74%), Gaps = 14/223 (6%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPT++AK FA + GL F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
IV+ K+L + N P + G + P PA K CC
Sbjct: 174 IVSAKSLES--SSTNIEPPT-QGISVTAPEPAD----KGGKCC 209
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 161/213 (75%), Gaps = 5/213 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FKVVLIGDS VGK+ +L+RF RNEF+L+SK+TIGVEF TR++ + K +KAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +++ + RWL+ELR HAD NIVI+L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPT++AK+FA GL F+ETSAL+ATNV+ +F +LTEI+ IV+ K L +
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALES- 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N SG+ ILV E K CC
Sbjct: 183 ---SNNTIKPTSGQTILVSQTPDE-QTKQGGCC 211
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 165/215 (76%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
++ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K +KAQ
Sbjct: 6 ADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVLKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TE+A FA++E FF+ETSALE+ NVENAF VLT+I+++V+KK L
Sbjct: 126 NKADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSKKALEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K CC
Sbjct: 186 GD-----DPAALPKGQTINVGSRDDVSAVKKDGCC 215
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 172/224 (76%), Gaps = 10/224 (4%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M GG GD DY+FK+VLIGDSAVGKS +L+R++RNEF L+S+ATIGVEFQT+++V
Sbjct: 1 MGHGGSDGD-----DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMV 55
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I+ K VKAQIWDTAGQER+RAVTSAYYRGAVGAM+VYDIS++Q+F+++ RWLEELR ++D
Sbjct: 56 IEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSD 115
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
++V +L+GNKSDLE R V E+A + A++EGLFF+ETSAL++TNV AF TV+ EIF
Sbjct: 116 FSLVTMLVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFG 175
Query: 181 IVNKKNLTAGEGQGNGNPASLSG-KKILVPGPAQEIPAKSSMCC 223
+V+KK L++ + +LSG KK+ + P S + C
Sbjct: 176 MVSKKILSSDSSK----AGTLSGTKKLGLENGNSSKPQDSGLSC 215
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 164/215 (76%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV T+DAK FA++E FF+ETSALE+ NV+N+F VLT+I+ +V++K L
Sbjct: 126 NKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K CC
Sbjct: 186 GD-----DPAALPKGQTINVGSRDDVSAVKKVGCC 215
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 169/221 (76%), Gaps = 4/221 (1%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +
Sbjct: 43 GRAMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG 102
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NI
Sbjct: 103 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 162
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+L+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV+
Sbjct: 163 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVS 222
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+K ++ + + N S + I VP + P CC+
Sbjct: 223 QKQMS--DRRENDTSPSNNVVPIHVPPTTENKP--KVQCCQ 259
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 165/216 (76%), Gaps = 8/216 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VL+GDSAVGKS +LARFARNEF +SK+TIGVEFQT+ L I K VKAQIWDTA
Sbjct: 12 DYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD I RWL EL++H+D N+V IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K + + E +
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 195 NGNPASLSGKKILVPGP-----AQEIPAKSSMCCRT 225
P L GK +++ G A E P KS CC +
Sbjct: 192 QDAP--LDGKTVVLQGDENQERATESP-KSGGCCSS 224
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 161/210 (76%), Gaps = 8/210 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TEDAK FA++E FF+ETSALE+ NVENAF VLT+I+ +V++K L G+
Sbjct: 131 RHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEVGD--- 187
Query: 195 NGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
+P +L G+ I V + K CC
Sbjct: 188 --DPGALPKGQTINVKDDVSAV--KKVGCC 213
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 160/209 (76%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK VLIGDS VGKS +L+RF +NEF L+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 16 DYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTA 75
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++RR +FD++ RWL+ELR H D +IV++L+GNKSDL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNKSDL 135
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED KE+A+ E L+F+ETSAL+ATNVENAF VLT+I+ V+KK + E
Sbjct: 136 RHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV---EASD 192
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G+ A + G+KI V + K CC
Sbjct: 193 DGSNAPIKGEKINVKDDVSAL--KRIGCC 219
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 164/211 (77%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG-EGQ 193
AV TED K FA++E L+F+ETSALEATNV++AF VLT+I+ IV+KK + G E
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSKKAMETGDEAA 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+ P+ G+KI V ++++ A K CC
Sbjct: 191 ASAVPS--KGEKIDV---SKDVSAMKRVGCC 216
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 166/216 (76%), Gaps = 7/216 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G ++ DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ I K+VK
Sbjct: 2 GTSDEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA++VYD++R+ +F+++ RWL+ELR H D NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL RAVPTE+A FA++E +F+ETSALE+ NV+NAF+ VL+EI+N+V++K L
Sbjct: 122 VGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTL 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G +P +L + + G + K CC
Sbjct: 182 EKG-----NDPGALPQGQTINLGDVSAV--KKPGCC 210
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%), Gaps = 8/216 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK +A++ L F+ETSAL++TNVE AF +LTEI+ V+ K++
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ QG G G ++P PA + P K CC
Sbjct: 182 -GTDRQGYG-----GGSGTIIPSPASDPPKK--QCC 209
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 165/223 (73%), Gaps = 13/223 (5%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MADGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIS 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPT++AK FA + L F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
IV+ K+L + + NP + V P + + CC
Sbjct: 174 IVSSKSL-----ESSANPIEPPNSSVTVSATVDPTP-QGNKCC 210
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 168/218 (77%), Gaps = 8/218 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK +A++ L F+ETSAL++TNVE AF +LTEI+ V+ K++
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ QG G G ++P P E P K CC +
Sbjct: 182 -GSDRQGYG-----GGSGTIIPAPPTEPPKK--QCCNS 211
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV EDAK FA++E FF+ETSALEA NVE+AF VLT+I+ +V+KK L G+
Sbjct: 130 RHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKALDIGD--- 186
Query: 195 NGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+PA+ G+ I V G K + CC
Sbjct: 187 --DPAAPPRGQTINVGGKDDVSAVKKAGCC 214
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 166/218 (76%), Gaps = 5/218 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK F++K GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCCR 224
N + G+ + +V P K S CC+
Sbjct: 182 ----NDSNNDEEVKDGQPVDIVISSTNPQPNKQSQCCK 215
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 161/213 (75%), Gaps = 3/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQI
Sbjct: 3 NDEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ + +G I + PA + AK CC
Sbjct: 183 D---SAQATIGAGTNISLSKPADDDAAKGGKCC 212
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%), Gaps = 8/216 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VK
Sbjct: 1 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 60
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 120
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK +A++ L F+ETSAL++TNVE AF +LTEI+ V+ K++
Sbjct: 121 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 180
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ QG G G ++P PA + P K CC
Sbjct: 181 -GTDRQGYG-----GGSGTIIPSPASDPPKK--QCC 208
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 158/209 (75%), Gaps = 3/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K FA++E L+F+ETSALEATNV+NAF VL +I++IV+KK + G+
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGDNAA 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
S G+KI V + K CC
Sbjct: 191 ASAVPS-KGEKIDVNKDVSAM--KRVGCC 216
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
GD Q DY+FK+VL+GDS+VGKS +LARFARNEF +SK+TIGVEFQT+ LVI K +K
Sbjct: 5 GDDGQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD + RWL EL +H+D N+V IL
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL+ R V T + + A+ +GLFF+ETSAL+++NV AF TV+ EI++I+++K
Sbjct: 125 VGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVF 184
Query: 188 TAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCRT 225
+ E Q SLS GK +++ G + + CC +
Sbjct: 185 QSLE-QKKSELQSLSNGKAVVLQGETNQTSSGGRWCCSS 222
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNE L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +DA+ A+KEGL FLETSALEA NVE AF T+L +I++I++KK L A
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E P G I V + + ++ CC T
Sbjct: 186 EAASINLP---HGTTINVGDLSGNMNKRT--CCST 215
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 167/218 (76%), Gaps = 7/218 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL FLETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM-CCR 224
+ + + +S +V Q K M CC+
Sbjct: 182 SERQ------ESDMSPSNNVVNIQVQPTENKPKMQCCQ 213
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 172/224 (76%), Gaps = 10/224 (4%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M GG GD DY+FK+VLIGDSAVGKS +L+R++RNEF L+S+ATIGVEFQT+++V
Sbjct: 1 MGHGGSDGD-----DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMV 55
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I+ K VKAQIWDTAGQER+RAVTSAYYRGAVGAM+VYDIS++Q+F+++ RWLEELR ++D
Sbjct: 56 IEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSD 115
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
++V +L+GNKSDLE R V E+A + A++EGLFF+ETSAL++TNV AF TV+ EIF
Sbjct: 116 FSLVTMLVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFG 175
Query: 181 IVNKKNLTAGEGQGNGNPASLSG-KKILVPGPAQEIPAKSSMCC 223
+V+KK L++ + +LSG KK+ + P S + C
Sbjct: 176 MVSKKILSSDSSKAR----TLSGTKKLGLENGNSSKPQDSGLSC 215
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVY +++RQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +EDA+ A+KE L FLETSALEA NVE AF T+L +I+ I+++K L A
Sbjct: 126 KSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKALAAQ 185
Query: 191 EGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
E + SL G I V + + K+ CC
Sbjct: 186 EA---ASTTSLPHGTTINVSNLSSNVEKKT--CC 214
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/174 (69%), Positives = 147/174 (84%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FK+VLIGDS VGK+ IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 7 QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+DL R+V ED + A+ EGL FLETSALEATNVE AF TVL EI++I++KK
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 169/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KMQCCQ 214
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 167/217 (76%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+ K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KMQCCQ 214
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 166/218 (76%), Gaps = 1/218 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQ 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K GL F+ETSAL++TNVE AF +LTEI++IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+P++ + + I V E K CC T
Sbjct: 182 HDSPTSDGSHPSN-NVQTIHVAPTTDEDRRKRVQCCNT 218
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L + K +KAQ
Sbjct: 6 ADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ WL+ELR+H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL AV TEDAK FA+KE L+F+ETSALEATNVENAF VLT+I +IV+KK + A
Sbjct: 126 NKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEA 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N P+ G KI + + K CC
Sbjct: 186 ASESANV-PS--KGDKIDIGKDVSAV--KKGGCC 214
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 163/210 (77%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+EL+ H D NIV++L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R V TED + +++KEGL+F+ETSALE+ NVEN+F +LT+I+ +V+KK L GE
Sbjct: 130 RHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGE--- 186
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+P+++ GK + ++ A K CC
Sbjct: 187 --DPSAVPGKGQTINVSKDDVTATKKVGCC 214
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 160/218 (73%), Gaps = 3/218 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L + K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSFD++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RA+ ++ K A+KEGLFFLETSA+EA NVE AF T++TE++ IVN+K L
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A E GK I + A CC T
Sbjct: 183 AAKEAAAATASLPSQGKIISIDSTAGNTK---RACCST 217
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 148/175 (84%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL I K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
K DL+ RAV ED + A++E L FLETSALEATN+E AF T+LTEI++I++KK
Sbjct: 126 KCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKK 180
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 165/217 (76%), Gaps = 2/217 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K L F+ETSAL++TNVE AF +LTEI++IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ G+ S + + I V K CC+
Sbjct: 182 R--DSPGDDESPSTNVQTITVAPTTDADTKKKLACCQ 216
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 167/219 (76%), Gaps = 7/219 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL FLETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM-CCRT 225
+ + +S +V Q K M CC++
Sbjct: 182 S------DRRDNDMSPSNNVVSIQVQPTENKPKMQCCQS 214
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV EDAK FA++E FF+ETSALE+ NVE+AF VLT+I+ +V+KK L G+
Sbjct: 130 RHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD--- 186
Query: 195 NGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+PA+ G+ I V G K S CC
Sbjct: 187 --DPAAPPRGQTINVGGKDDVSAVKKSGCC 214
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 167/222 (75%), Gaps = 3/222 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + ++ DY+FK+VLIGDSAVGKS +LARFARNEF SK+TIGVEFQT+ + I K +
Sbjct: 4 YSEDDKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD I +WL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPA-QEIPA--KSSMCCRT 225
+ + E G P +GK +++ G QE A K CC +
Sbjct: 184 MMSQELNKPGAPELGNGKTVVLKGDGDQEGNAGTKKGWCCSS 225
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 167/214 (78%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + +K++KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPT+DAK FA + L F+ETSAL+ATNVE AF +LTEI+NIV+ K+
Sbjct: 123 KSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAEE 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIP-AKSSMCC 223
+G+ +P G I + +QE P +S CC
Sbjct: 183 DGK-KFDPRE-GGTNITL---SQEGPKGESKGCC 211
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 168/218 (77%), Gaps = 8/218 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK +A++ L F+ETSAL++TNVE AF +LTEI+ V+ K++
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ QG G G ++P P E P K CC +
Sbjct: 182 -GTDRQGYG-----GGSGTIIPAPPTEPPKK--QCCNS 211
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/224 (58%), Positives = 170/224 (75%), Gaps = 12/224 (5%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAV TE+AK FA ++GL F+ETSAL+A+NVE+AF +LT+I+
Sbjct: 114 ANIVIMLVGNKSDLKHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAK-SSMCC 223
IV+ K+L E G+ S G+ ILV A + AK CC
Sbjct: 174 IVSSKSL---ESSGDVIKPS-GGETILVTPTADDGGAKQGGKCC 213
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 161/209 (77%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV T++ K FA++E L+F+ETSALE+TNVENAF VL +I+ IV+K+ + AGE
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRAVEAGEDAA 191
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G P G+KI + + K CC
Sbjct: 192 SG-PG--RGEKINIKDDVSAV--KKGGCC 215
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 161/219 (73%), Gaps = 16/219 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK----- 185
KSDL R V +DA+ FA+KEGL F+ETSALE+TNVE AF +LTEI+ IV+KK
Sbjct: 126 KSDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 186 -NLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N T G GQG +VP + K CC
Sbjct: 186 ENATEGPGQGTN----------IVPLDSNSPDLKKKGCC 214
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H + NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDA FA++E FF+ETSALE+ NVENAF VLT+I+++V++K L
Sbjct: 126 NKADLRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKALDV 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ +PA+L + + G K CC
Sbjct: 186 GD-----DPAALPKGQTINVGKDDVSAVKKVGCC 214
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 161/209 (77%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV T++ K FA++E L+F+ETSALE+TNVENAF VL +I+ IV+K+ + AGE
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRAVEAGEDAA 191
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G P G+KI + + K CC
Sbjct: 192 SG-PG--RGEKINIKDDVSAV--KKGGCC 215
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 163/210 (77%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+EL+ H D NIV++L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R V TED + +++KEGL+F+ETSALE+ NVEN+F +LT+I+ +V+KK L GE
Sbjct: 130 RHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGE--- 186
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+P+++ GK + ++ A K CC
Sbjct: 187 --DPSAVPGKGQTINVSKDDVTATKKVGCC 214
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 165/215 (76%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K++KAQ
Sbjct: 5 PDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +F+++ RWL+ELR HAD NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL+ R V TE A+ F ++EGL F+ETSALE+TNVE AF +LTEI++IV+KK L +
Sbjct: 125 NKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSS-MCC 223
+ + P G+ ++V A + K CC
Sbjct: 185 EDNR----PKIGEGRDVIVIDNAHDDGGKKKGGCC 215
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 162/211 (76%), Gaps = 4/211 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+EL++H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AVPTED K +A++E L+F+ETSALEA NVE AF VLT+I++IV+KK + GE G
Sbjct: 131 RHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGE-NG 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + G+KI + E CC +
Sbjct: 190 SASAVPAQGEKINIK---DESGLNRIKCCSS 217
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 151/175 (86%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF T+TL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD+++RQ+F+++ RWL ELR HAD NIVI++IGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
KSDL R+V +D + A+KEGL F+ETSAL+ATN++ AF T+LTEI++I++KK
Sbjct: 126 KSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 161/211 (76%), Gaps = 3/211 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +++++ +WL+ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TEDAK FA+ E L+F+ETSALEATNV+NAF VLT+I++IV+KK + +
Sbjct: 131 RHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAA 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ G+KI + E+ K CC +
Sbjct: 191 -ASAVIAKGEKIDISKDVSEV--KKGGCCSS 218
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 169/218 (77%), Gaps = 6/218 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQ
Sbjct: 3 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 62
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +F+++ RWL+ELR HAD NIVI+L+G
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVG 122
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAV T+DA+ +A++ L F+ETSAL++TNVE AF T+LTEI+ +V+++ + A
Sbjct: 123 NKSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEA 182
Query: 190 GEGQGNGNPASLSGKKILVP----GPAQEIPAKSSMCC 223
GE +P+ G+K++V A E +K S C
Sbjct: 183 GE--SGDSPSVGQGEKVIVSREDETKAAERKSKCSGSC 218
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 168/218 (77%), Gaps = 2/218 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + +P+ + K I + P + CC+T
Sbjct: 182 R-NDADNDPSPSGDNVKAISI-APTDSSDTRKRQCCQT 217
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ +++ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VK
Sbjct: 2 GNRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK DL RAVPT++AK FA++ L F+ETSAL++TNVE AF +LTEI+ IV++K+L
Sbjct: 122 VGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSL 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GN G I + E CC
Sbjct: 182 ---PDSGNSGAGPDDGSTIDIGSTVTENSGNKKPCC 214
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 170/221 (76%), Gaps = 5/221 (2%)
Query: 8 GDPNQK-IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
GD + + IDY+FKVV+IGDS VGKSQ+L RF RNEF L SKATIGVEF T+T+++ HK V
Sbjct: 6 GDLDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLV 65
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERY+A+T+AYYRGA GA+L YDI++R +F+HI +WL+EL +HADKNIV++
Sbjct: 66 KAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVM 125
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL R VP E+A++ A+++G FF+ETSAL++ NVE AF+ +L++I+ ++KK+
Sbjct: 126 LVGNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVTMSKKH 185
Query: 187 LTAGEGQGNGNPASL--SGKKILVPG--PAQEIPAKSSMCC 223
+TA + N + +L G K+LV P + K CC
Sbjct: 186 ITADGRERNWDKVNLEFEGTKLLVSSQEPECQKSKKRFSCC 226
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/190 (64%), Positives = 156/190 (82%), Gaps = 6/190 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK----- 185
KSDL+ R V T+DA+ F++KEGL F+ETSALE+TNVE AF +LTEI+ IV+KK
Sbjct: 126 KSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 186 -NLTAGEGQG 194
N T G GQG
Sbjct: 186 ENTTEGPGQG 195
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 164/215 (76%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDA F+++E +F+ETSALE+ NVE+AF VLT+I+ +V+KK L
Sbjct: 126 NKADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKALEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K + CC
Sbjct: 186 GD-----DPAALPKGQTINVGSRDDVSAVKKAGCC 215
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 168/212 (79%), Gaps = 8/212 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK FA+K GL FLETSAL+++NVE AF T+LT I+NIV+++ ++ G
Sbjct: 129 RHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMS-GRSDA 187
Query: 195 NGNPASLSGKKILVPGPAQ--EIPAKSSMCCR 224
+ +P+S +VP Q + +K CC+
Sbjct: 188 DFSPSS-----NVVPITVQPTQNASKQGACCQ 214
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/180 (66%), Positives = 151/180 (83%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L + K +KAQ
Sbjct: 6 ADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV++LIG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL AVPTED K FA++E L+F+ETSALEATNVENAF VL++I+ IV+KK + A
Sbjct: 126 NKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEA 185
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 169/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K++
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 169/221 (76%), Gaps = 4/221 (1%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +
Sbjct: 43 GRAMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG 102
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NI
Sbjct: 103 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 162
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+L+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV+
Sbjct: 163 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVS 222
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+K ++ + + N S + I VP + P CC+
Sbjct: 223 QKQMS--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 259
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 3 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 123 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 183 S--DRRENDMSPSNNVVPIHVPPTTENKP--KMQCCQ 215
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 162/210 (77%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TED+ FA++E FF+ETSALE+ NVE+AF VLT+I+ +V+KK L G+
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGD--- 177
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+PA+L + + G ++ A K CC
Sbjct: 178 --DPAALPKGQTINVGSRDDVSAVKKGGCC 205
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 161/209 (77%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +N FSLDSK+TIGVEF TRT ++ K++KAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIWDTA 76
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIGNK+DL
Sbjct: 77 GQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNKTDL 136
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R+V T+ A FA+ EGL F+ETSAL+ATNV+ AF TVL EI +++KK LT E G
Sbjct: 137 RHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALTT-EDSG 195
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G+ ILV G E + SS CC
Sbjct: 196 AGVVG--EGQSILVSGG--EPTSVSSRCC 220
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 122/188 (64%), Positives = 153/188 (81%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV++LIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL AVPTED K FA+KE L+F+ETSALEATNVENAF VL++I+ IV+K+ +
Sbjct: 127 KSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVARQ 186
Query: 191 EGQGNGNP 198
E Q P
Sbjct: 187 ECQFFCCP 194
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 163/215 (75%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TED+ FA++E FF+ETSALE+ NVE+AF VLT+I+ +V+KK L
Sbjct: 126 NKADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K CC
Sbjct: 186 GD-----DPAALPKGQTINVGSRDDVSAVKKGGCC 215
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 157/211 (74%), Gaps = 3/211 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL GDS VGKS +L+RF RN+FS DS++TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D N VI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RA+ TE+ K+FA++E FF+ETSALEA NVENAF VLT+I+ +V+KK L AG+
Sbjct: 131 NHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPT 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
P G+ I V K S CC T
Sbjct: 191 TALP---KGQMINVGSRDDVSAVKKSGCCAT 218
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 164/223 (73%), Gaps = 12/223 (5%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ ++ ++ RWL+ELR HAD
Sbjct: 54 VDSKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPTE+AK F+ + L F+ETSAL+A+NVE+AF T+LT+++
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
IV+ K+L + + +P + P K+ CC
Sbjct: 174 IVSTKSL-----EQSSDPIRAPTSDTIPVAIDSSAPTKNGSCC 211
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 163/215 (75%), Gaps = 4/215 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ I +K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ SF+++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+D RAVPTED K FA + GL F+ETSALEATNV+ AF +LT I+ IV+ K+L A
Sbjct: 122 NKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL-A 180
Query: 190 GEGQGNGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
EG G G I + ++ +K+ CC
Sbjct: 181 EEGADVGKKFDPREGNNITLSQEGRKEESKT--CC 213
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 164/216 (75%), Gaps = 3/216 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ + N S + + I V P K CC
Sbjct: 182 R--DSPDDENSPSNNVQTITV-APTDNSADKKQKCC 214
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 159/218 (72%), Gaps = 3/218 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L I K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAV A+LVYDI++RQSFD++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RA+ ++ K A+KEGLFFLET A+EA NVE AF T++TE++ IVN+K L
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A E P GK I + A CC T
Sbjct: 183 AAKEAAATAAPLPSQGKTISIDSNAGNTK---KACCST 217
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 164/211 (77%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI+R +F+++ RWL+EL+ H D NIV++L+GNKS L
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSVL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV +D + F++KEGLFF+ETSALE+TNVENAF + T+I+ +V+KK L GE
Sbjct: 130 RHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKALDVGE--- 186
Query: 195 NGNPASLSGK-KILVPGPAQEIPA-KSSMCC 223
+P+++ GK + + G ++ A K CC
Sbjct: 187 --DPSAVPGKGQTISVGNKDDVTATKKVGCC 215
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 167/210 (79%), Gaps = 4/210 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVP ++AK FA+K GL FLETSAL+++NVE AF T+LTEI+ IV+++ ++ G G
Sbjct: 129 RHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMS-GRGDD 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ +P+S K + + + K S CC+
Sbjct: 188 SFSPSS---KVVPITVQPTQNSGKQSACCQ 214
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 119/180 (66%), Positives = 151/180 (83%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L + K +KAQ
Sbjct: 6 ADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV++LIG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL AVPTED K FA++E L+F+ETSALEATNVENAF VL++I+ IV+KK + A
Sbjct: 126 NKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEA 185
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEFS D+K+TIGVEF TR++ ++ K +KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA+LVYDIS+R S++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAVPT++A+ FA + GL F+ETSAL+A+NV++AF T LT+I+ IV+ + L +
Sbjct: 128 KHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTL-----ES 182
Query: 195 NGNPASLSGKKILVPGPAQEIPAK-SSMCC 223
+ NP + GP+ + AK S+ CC
Sbjct: 183 SANPIEAPSGNTVSVGPSLDSNAKQSNGCC 212
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 161/205 (78%), Gaps = 5/205 (2%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 9 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 68
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRA 128
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPT++AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G+G A
Sbjct: 129 VPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGA----QA 184
Query: 200 SL-SGKKILVPGPAQEIPAKSSMCC 223
++ +G I + A + +KS CC
Sbjct: 185 TIGAGTNISLSKAADDEASKSGKCC 209
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ +++ DY+F+VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VK
Sbjct: 2 GNRDEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK DL RAVPT++AK FA++ L F+ETSAL++TNVE AF +LTEI+ IV++K+L
Sbjct: 122 VGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSL 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GN G I + E CC
Sbjct: 182 ---PDSGNSGAGPDDGSTIDIGSTVTENSGNKKPCC 214
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 168/218 (77%), Gaps = 2/218 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + +P+ + K I + P + CC+T
Sbjct: 182 R-NDADNDPSPSGDNVKAISI-APTDSSDTRKRQCCQT 217
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/208 (63%), Positives = 165/208 (79%), Gaps = 8/208 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQTRT+ +Q K VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIW 82
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAM+VYDI++R SFDH+ RW+EELR+HAD + VI+L+GNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 132 SDLE-EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN--IVNKKNLT 188
+DL ++RAVPTEDA EFA+ + LFF E SAL NV+ AF +L EIF+ +V++K
Sbjct: 143 ADLAVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRK--- 199
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEI 215
A E G G P L G +I ++ G EI
Sbjct: 200 AMESDG-GAPVKLDGSRIDVISGSDLEI 226
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 163/220 (74%), Gaps = 6/220 (2%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
G G DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K
Sbjct: 24 GRKGRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 83
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H D NIV
Sbjct: 84 VVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIV 143
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
I+L+GNK+DL RAV EDAK FA++E FF+ETSALE+ NVE+AF VLT+I+ +V+K
Sbjct: 144 IMLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSK 203
Query: 185 KNLTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCC 223
K L G+ +PA+ G+ I V G K S CC
Sbjct: 204 KALDIGD-----DPAAPPRGQTINVGGKDDVSAVKKSGCC 238
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 166/210 (79%), Gaps = 4/210 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVP ++AK A+K GL FLETSAL+++NVE AF T+LT I+NIV+++ +T G+
Sbjct: 129 RHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMT---GRS 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + S + P Q AKSS CC+
Sbjct: 186 DTDFSPNSNVVPITVQPTQN-AAKSSACCQ 214
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 161/215 (74%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D N VI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E FF+ETSALE+ NVENAF VLT+I+ +V++K L
Sbjct: 126 NKADLRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDV 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ + L + + G ++ A K + CC
Sbjct: 186 GD-----DSTYLPKGQTINVGSRDDVSAVKKAGCC 215
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 156/209 (74%), Gaps = 3/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL GDS VGKS +L+RF RN+FS DS+ATIGVEF TR++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RA+ TE+AK FA++E FF+ETSALEA NV+NAF VLT+I+ +V+KK L AG+
Sbjct: 131 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P G+ I V G K CC
Sbjct: 191 TALP---KGQMINVGGRDDISAVKKPGCC 216
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 169/213 (79%), Gaps = 10/213 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++A+ FA+K GL FLETSAL+++NVE AF T+LT I+NIV+++ ++ G
Sbjct: 129 RHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMS-GRTDS 187
Query: 195 NGNPASLSGKKILVP---GPAQEIPAKSSMCCR 224
+ +PAS +VP P Q +K S CC+
Sbjct: 188 DFSPAS-----NVVPISVEPTQTSSSKGS-CCQ 214
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 167/218 (76%), Gaps = 9/218 (4%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK +A+K L F+ETSAL++TNVE AF +LTEI+ V+ K++
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHV 181
Query: 188 TAGEGQGNGNPASLS--GKKILVPGPAQEIPAKSSMCC 223
G N A++S G +V P E P CC
Sbjct: 182 ------GGDNRAAISTPGSNGIVISPTAE-PQTKKQCC 212
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D +IVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK DL AV +DAK FA++E FF+ETSALE+ NVENAF VLT+I+ +V++K L
Sbjct: 126 NKGDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K + CC
Sbjct: 186 GD-----DPAALPKGQTINVGTKDDVSAVKKAGCC 215
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 117 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 176
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 177 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 236
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV EDAK FA++E FF+ETSALE+ NVE+AF VLT+I+ +V+KK L G+
Sbjct: 237 RHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD--- 293
Query: 195 NGNPASLS-GKKILVPGPAQEIPAKSSMCC 223
+PA+ G+ I V G K S CC
Sbjct: 294 --DPAAPPRGQTINVGGKDDVSAVKKSGCC 321
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 163/216 (75%), Gaps = 8/216 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VL GDSAVGKS +LARFARNEF DSK+TIGVE QT+ L I K VKAQIWDTA
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD I RWL EL++H+D N+V IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K + + E +
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 195 NGNPASLSGKKILVPGP-----AQEIPAKSSMCCRT 225
P L GK +++ G A E P KS CC +
Sbjct: 192 QDAP--LDGKTVVLQGDENQERATESP-KSGGCCSS 224
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 167/221 (75%), Gaps = 2/221 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + + DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 YSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R VPT + K A+ +GLFF+ETSAL+++NV NAF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGK-KILVPGPAQ-EIPAKSSMCCRT 225
+ + E + +GK +++ G Q E K CC +
Sbjct: 184 MISQELKKQDVSWMENGKTTVVIQGEDQVEGEPKKGGCCSS 224
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 151/177 (85%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D +IVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
RAV TEDAK +A+KE FF+ETSALE+TNVENAF VLT+I+++V++K L G+
Sbjct: 131 GHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGD 187
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ DY+FKVVLIGDS VGKS +L RF RNEFSL+SK+TIGVEF TR++ + K VKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+EL+ H D NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAVP EDAK FA++E +F ETSALEA NVE+AF VLT+I+ +V+KK L G
Sbjct: 126 KADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+ +PA+ + + G ++ A K + CC
Sbjct: 186 D-----DPAAPPRGQTINVGSKDDVSAVKKAGCC 214
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 158/203 (77%), Gaps = 3/203 (1%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 9 MVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERY 68
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 128
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L GEG G P
Sbjct: 129 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGSG---PV 185
Query: 200 SLSGKKILVPGPAQEIPAKSSMC 222
+ +K+L + + K C
Sbjct: 186 LGNDRKVLEISKSADAEQKKGCC 208
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 160/210 (76%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D+++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H + NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TEDAK FA++E FF+ETSALEA NVENAF VL++I+ + +KK L G+
Sbjct: 131 RHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGD--- 187
Query: 195 NGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
+PA+L G+ I V K CC
Sbjct: 188 --DPATLPKGQSINVGSKDDVSEVKKVGCC 215
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 161/212 (75%), Gaps = 9/212 (4%)
Query: 14 IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDT 73
+ YV VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++K+QIWDT
Sbjct: 8 VSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 67
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYD+S+ Q+++++ RWL+ELR HAD NIVI+L+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 127
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L RAVPT++AK+FA + L F+ETSAL+A+NVE AF +LTEIF IV+ K L +G+
Sbjct: 128 LRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESGDSS 187
Query: 194 GNGNPASLSGKKI--LVPGPAQEIPAKSSMCC 223
N L +K+ + P E K CC
Sbjct: 188 AN----QLGDRKVVEITKTPDSE---KKPGCC 212
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 165/230 (71%), Gaps = 22/230 (9%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASG D DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L
Sbjct: 1 MASGYRAEDD---YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQ 57
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F++ RWL+ELR H D
Sbjct: 58 VDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTD 117
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIV++L+GNKSDL AV T++ K FA++E L+F+ETSALE+TNVE+AF VLT+I+
Sbjct: 118 PNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYR 177
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM-------CC 223
IV+K+ + AGE +G PG ++I K + CC
Sbjct: 178 IVSKRAVEAGEDSASG------------PGKGEKINMKDDVSAVKKGGCC 215
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV EDAK FA++E FF+ETSALE+ NVE+AF VLT+I+ +V+KK L G+
Sbjct: 130 RHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD--- 186
Query: 195 NGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+PA+ G+ I V G K + CC
Sbjct: 187 --DPAAPPRGQTINVGGKDDVSAVKKAGCC 214
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 163/212 (76%), Gaps = 6/212 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 509 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 568
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D +IVI+L+GNK DL
Sbjct: 569 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGNKGDL 628
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV +DAK FA++E FF+ETSALE+ NVENAF VLT+I+ +V++K L G+
Sbjct: 629 RHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIGD--- 685
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCCRT 225
+PA+L + + G ++ A K + CC +
Sbjct: 686 --DPAALPKGQTINVGTKDDVSAVKKAGCCSS 715
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 169/214 (78%), Gaps = 10/214 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K++KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK FA+K GL FLETSAL+++NVE AF T+LT I+NIV+++ ++ G
Sbjct: 129 RHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMS-GRSDS 187
Query: 195 NGNPASLSGKKILVP---GPAQEIPAKSSMCCRT 225
+ +PAS +VP P Q K + CC++
Sbjct: 188 DFSPAS-----NVVPITVEPTQNSSNKGA-CCQS 215
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 164/215 (76%), Gaps = 8/215 (3%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
++ DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+ +G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E +F+ETSALE+ NVENAF VLT+I+++V++K L
Sbjct: 126 NKADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKALDI 185
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
G+ +PA+L G+ I V + K CC
Sbjct: 186 GD-----DPAALPKGETINVKDDVSAV--KKVGCC 213
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ DY+FKVVLIGDS VGKS +L RF RNEFSL+SK+TIGVEF TR++ + K VKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+EL+ H D NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAV EDAK FA++E FF+ETSALEA NVE+AF VLT+I+ +V+KK L G
Sbjct: 126 KADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+ +PA+ + + G ++ A K + CC
Sbjct: 186 D-----DPAAPPRGQTINVGSKDDVSAVKKAGCC 214
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 167/217 (76%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL+ TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/171 (69%), Positives = 148/171 (86%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR+H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
AV TED K +A+KE L+F+ETSALEATNVENAF VLT+I++IV+KK
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKK 181
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 164/210 (78%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF++++K+TIGVEF TR++ ++ K++KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA+LVYDIS+ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAVPTE+AK FA + GL F+ETSAL+A+NVE+AF T+LT+I+ IV+ K+L E
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSE--- 184
Query: 195 NGNPAS-LSGKKILVPGPAQEIPAKSSMCC 223
+P SG I V + ++ CC
Sbjct: 185 --DPIKPTSGDTIQVSHSVDQNQSQGGKCC 212
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 167/217 (76%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTGNKPKMQ--CCQ 214
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 166/220 (75%), Gaps = 1/220 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + + DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 YNEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA++VYDISRRQ+FD I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM-CCRT 225
+ + E + P +GK +++ G E +S CC +
Sbjct: 184 MMSQELTKHEVPRIENGKSVVIQGENLEADGQSKKGCCSS 223
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/225 (58%), Positives = 171/225 (76%), Gaps = 14/225 (6%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+NIVI+L+GNKSDL+ RAVPT++AK F+ + L F+ETSAL+A+NVE+AF +LT+I+
Sbjct: 114 QNIVIMLVGNKSDLKHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNG-NPASLSGKKILVPGPAQEIPAK-SSMCC 223
IV+ K L + G+ PA G+ ILV A + AK S CC
Sbjct: 174 IVSSKAL---DSSGDVIKPA--GGETILVAPTADDGGAKQGSKCC 213
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 166/225 (73%), Gaps = 14/225 (6%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPTE+AK F+ + GL F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPA--QEIPAKSSMCC 223
IV+ K+L + + +P L P+ A+ CC
Sbjct: 174 IVSSKSL-----EQSADPIKPPTGDTLTVSPSVDNSANAQGGKCC 213
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 166/218 (76%), Gaps = 8/218 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK +A++ L F+ETSAL++TNVE AF +LTEI+ V+ K++
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
G+ G ++P P E P K CC +
Sbjct: 182 ------GSDRQGYGGGGGTIIPAPPTEPPKK--QCCNS 211
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 159/210 (75%), Gaps = 5/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL GDS VGKS +L+RF RN+FS DS+ATIGVEF TR++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RA+ TE+AK FA++E FF+ETSALEA NV+NAF VLT+I+ +V+KK L AG+
Sbjct: 131 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 190
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
P G+ I V G +I A K CC
Sbjct: 191 TALP---KGQMINV-GSRDDISAVKKPGCC 216
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 164/213 (76%), Gaps = 3/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGD+ VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ SFD++ RWL+EL+ HAD NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ +AV T+DA FA+ GL F+ETSAL+ +NVE AF ++L+EI+ + +KK L G
Sbjct: 125 KSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKG 184
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N A + + I++ PA E + + CC
Sbjct: 185 ---STSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/238 (55%), Positives = 162/238 (68%), Gaps = 35/238 (14%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH------- 63
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL +
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLSLSLN 65
Query: 64 ----------KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLE 113
K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL
Sbjct: 66 LDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLR 125
Query: 114 ELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMT 173
ELR HAD NIVI++ GNKSDL R+V ED + A+KEGL FLETSALEATN+E AF T
Sbjct: 126 ELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQT 185
Query: 174 VLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
+L+EI++I++KK L A E GN +PG I S CC T
Sbjct: 186 ILSEIYHIISKKALAAQEAAGN------------LPGQGTAINISDSSATNRKGCCST 231
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 165/225 (73%), Gaps = 14/225 (6%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K++KAQIWDTAGQERYRA+T+AYYRGAVGA+LVYDI++ S+ ++ RWL+ELR HAD
Sbjct: 54 VDGKTIKAQIWDTAGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPT++AK F+ + GL F+ETSAL+ATNVE+AF T LT+I+
Sbjct: 114 ANIVIMLVGNKSDLKHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNP--ASLSGKKILVPGPAQEIPAKSSMCC 223
IV+++ L + N +P + + P A S CC
Sbjct: 174 IVSRQTL-----EQNADPIKPPTGDTRTINPSVDNSASAPSGKCC 213
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 163/210 (77%), Gaps = 3/210 (1%)
Query: 14 IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDT 73
+DY+FKVVLIGD+ VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K +KAQIWDT
Sbjct: 9 VDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDT 68
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI+++ SFD++ RWL+EL+ HAD NIVI+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSD 128
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L+ +AV T+DA FA+ GL F+ETSAL+ +NVE AF ++L+EI+ + +KK L G
Sbjct: 129 LQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKG--- 185
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N A + + I++ PA E + + CC
Sbjct: 186 STSNFAPNATQTIVINPPADEGKTEKAKCC 215
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 170/227 (74%), Gaps = 6/227 (2%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA GG D Q DY+FK+VL+GDS+VGKS +LARFARNEF +SK+TIGVEFQT+ LV
Sbjct: 1 MAYGG---DEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLV 57
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I K +KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI+RRQ+FD + RWL EL +H+D
Sbjct: 58 IDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSD 117
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
N+V ILIGNK+DL+ R V T + K A+ +GLFF+ETSAL+++NV+ AF TV+ EI++
Sbjct: 118 MNVVTILIGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYS 177
Query: 181 IVNKKNLTAGEGQGNGNPASLS-GKKILVPGPA-QEIPAKSSMCCRT 225
I+++K E Q + SLS GK +++ A +E + CC +
Sbjct: 178 ILSRKVFQCQE-QKRSDLQSLSNGKAVVLQTDAPKEANSGRGWCCSS 223
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/187 (66%), Positives = 152/187 (81%), Gaps = 1/187 (0%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ I K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ SF+++ RWL+ELR HAD NIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+D RAVPTED K FA + GL F+ETSALEATNV+ AF +LT I+ IV+ K+L A
Sbjct: 122 NKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL-A 180
Query: 190 GEGQGNG 196
EG G
Sbjct: 181 EEGADVG 187
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 161/211 (76%), Gaps = 4/211 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQ RYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+EL++H D NIV++L+GNKSDL
Sbjct: 71 GQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AVPTED K +A++E L+F+ETSALEA NVE AF VLT+I++IV+KK + GE G
Sbjct: 131 RHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGE-NG 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + G+KI + E CC +
Sbjct: 190 SASAVPAQGEKINIK---DESGLNRIKCCSS 217
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 157/195 (80%), Gaps = 3/195 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +N FSLDSK+TIGVEF TRT+ ++ K++KAQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIWDTA 75
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD+++ +FD++ RWL+ELR HAD NIVI+LIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNKMDL 135
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R+V EDA FA++EGL F+ETSAL+ATNV+ AF TVL EI+ I++KK L+ +
Sbjct: 136 KHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALSTDD--- 192
Query: 195 NGNPASLSGKKILVP 209
+G A G+ I V
Sbjct: 193 SGAGAVKEGQSIQVS 207
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 163/218 (74%), Gaps = 2/218 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
GD Q DY+FK+VL+GDS+VGKS +LARFARNEF +SK+TIGVEFQT+ LVI K +K
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD + RWL EL +H+D N+V IL
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL+ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+ I+++K
Sbjct: 125 VGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVF 184
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ E + + SLS K ++ + E + CC +
Sbjct: 185 QSQEQK--RSEQSLSNGKPVMLSDSNEPTSGGRWCCSS 220
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 155/187 (82%), Gaps = 7/187 (3%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPT++AK FA + GL F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 TNIVIMLVGNKSDLKHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNL 187
IV+ K+L
Sbjct: 174 IVSAKSL 180
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ DY+FKVVLIGDS VGKS +L RF RNEFSL+SK+TIGVEF TR++ + K VKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+EL+ H D NIVI+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAV EDAK FA++E FF+ETSALE+ NVE+AF VLT+I+ +V+KK L G
Sbjct: 126 KADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+ +PA+ + + G ++ A K + CC
Sbjct: 186 D-----DPAAPPRGQTINVGSKDDVSAVKKAGCC 214
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 154/214 (71%), Gaps = 3/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRT+ + ++KAQ
Sbjct: 4 DNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKAQ 63
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +S++ + +WL+ELR HAD NIVI+LIG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLIG 123
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK DL+ R V TEDA+ FA EGL F ETSALE+TNVE AF +LTE+F IV+KK+ +
Sbjct: 124 NKCDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKSQS- 182
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N I V + S CC
Sbjct: 183 --NESNDQSQRHGSSTIEVNAINDGVKKSKSQCC 214
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 164/211 (77%), Gaps = 6/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK VLIGDS VGKS +L RF RNEF+++SK+TIGVEF TR +V+ +K +KAQIWDTA
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDI+++ SFD++ RWL+ELR HAD NIVI+L+GNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TE+A+ FA + L F+ETSA++A+NVE AF TVLTEIF IV+ ++L AG+
Sbjct: 128 LHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGD--D 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAK--SSMCC 223
+P +G+ + + ++ K SS CC
Sbjct: 186 GVHPT--AGQTLNIAPTMNDLNKKKSSSQCC 214
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 160/218 (73%), Gaps = 3/218 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L ++ K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSF+++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL R+V + K A+KEGLFFLETSA+EA NVE AF T++ E++ IVNKK L
Sbjct: 123 VGNKSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVNKKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A E P GK I + A CC T
Sbjct: 183 AAKEAAAAAAPLPSQGKAISIDSTAGN---SKRACCST 217
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 160/218 (73%), Gaps = 3/218 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L + K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSF+++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RA+ ++ K A+KEGLFFLETSA+EA NVE AF T++TE++ IVN+K L
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A E GK I + A CC T
Sbjct: 183 AAKEAAATTATLPSQGKTISIDSTAGNTK---RACCST 217
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 159/208 (76%), Gaps = 1/208 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT+D+K FA+K L F+ETSAL+ATNVE AF +LTEI++IV++K + +
Sbjct: 130 RHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTIVNDDHVA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMC 222
P S + P A + K C
Sbjct: 190 KV-PTSNVQTITVAPSEATDDKKKGGCC 216
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 158/204 (77%), Gaps = 5/204 (2%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++K+QIWDTAGQERY
Sbjct: 29 LVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 88
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 89 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 148
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPTE+AK+FA L F+ETSAL+A+NVE AF +LTEIF IV+ K L +G+ N
Sbjct: 149 VPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSAQN---- 204
Query: 200 SLSGKKILVPGPAQEIPAKSSMCC 223
LS +K++ Q+ P CC
Sbjct: 205 PLSDRKVVEITKTQD-PESKQGCC 227
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 157/206 (76%), Gaps = 4/206 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
V VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNG 196
RAVPT++AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L G+
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL----DNGDS 178
Query: 197 NPASLSGKKILVPGPAQEIPAKSSMC 222
A LS + + A + +K C
Sbjct: 179 GQAPLSSGRTIEVSKAPDTESKQGCC 204
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 156/203 (76%), Gaps = 3/203 (1%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERYR
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RAV
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 124
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPAS 200
PTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L G+ +
Sbjct: 125 PTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGD---SAQATI 181
Query: 201 LSGKKILVPGPAQEIPAKSSMCC 223
+G I + PA + +K CC
Sbjct: 182 GAGTNISLSKPADDDASKGGKCC 204
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 156/202 (77%), Gaps = 3/202 (1%)
Query: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 81
+IGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 82 VTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVP 141
+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RAVP
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 142 TEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASL 201
TE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G+ +
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD---SAQATIG 177
Query: 202 SGKKILVPGPAQEIPAKSSMCC 223
+G I + PA + AK CC
Sbjct: 178 AGTNISLSKPADDDAAKGGKCC 199
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 163/215 (75%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ DY+FKVVLIGDS VGKS +L+RF RNEFSL++K+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELRSH D NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDA+ FA++E +F+ETSALE+ NVEN+F VLT+ + +V++K L
Sbjct: 126 NKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +P L + + G ++ A K + CC
Sbjct: 186 GD-----DPTVLPKGQTIDIGSKDDVSAVKKAGCC 215
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 161/211 (76%), Gaps = 6/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF T+++V + K++KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ SF+++ RWL+ELR HAD N VI+L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+A FA+K L F+ETSALEA V++AF +LTEI+ ++++K + A E Q
Sbjct: 130 RHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAEENQ- 188
Query: 195 NGNPASLSGKKILVPGPAQE--IPAKSSMCC 223
+ SG I++ E + K S CC
Sbjct: 189 ---ISIPSGDNIVITSDKTEEGVKKKKSSCC 216
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 159/204 (77%), Gaps = 5/204 (2%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERYR
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYR 75
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RAV
Sbjct: 76 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 135
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPAS 200
PTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L GEG N
Sbjct: 136 PTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGGQN----V 191
Query: 201 LSG-KKILVPGPAQEIPAKSSMCC 223
L G +K+L + + K + CC
Sbjct: 192 LGGERKVLEISKSADEGQKKNGCC 215
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 146/173 (84%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +N F+LDSK+TIGVEF TRT+ + K++KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIWDTA 75
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD+++ +F+++ RWL+ELR HAD NIV++LIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKIDL 135
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
R+V EDA FA+ EGLFF+ETSAL+ATNVE AF TVL EI+ I++KK L
Sbjct: 136 RHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPL 188
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 169/215 (78%), Gaps = 1/215 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + +K+VK
Sbjct: 2 ANKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+EL+ HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL RAVPT++AK FA+K L F+ETSAL++TNVE AF +LT+I++IV++K +
Sbjct: 122 VGNKNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+ EG + +P+ + + P + KS C
Sbjct: 182 RS-EGDNDPSPSRDNIPITIAPTDPTDNRKKSCAC 215
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 162/216 (75%), Gaps = 5/216 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++++I RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK DL RAVPT++AK FA+K L F+ETSAL++TNVE AF +LTEI++IV++K +
Sbjct: 122 VGNKCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ +S + I+V K CC
Sbjct: 182 KDAPQN-----SEISSQPIVVGPTVDSDVKKKPQCC 212
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 169/214 (78%), Gaps = 10/214 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVP ++A+ FA+K GL FLETSAL+++NVE AF T+LT I+NIV+++ ++ G
Sbjct: 128 RHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMS-GRSDS 186
Query: 195 NGNPASLSGKKILVP---GPAQEIPAKSSMCCRT 225
+ +PAS +VP P Q + K +CC++
Sbjct: 187 DFSPAS-----NVVPITVEPTQTLSNK-GVCCQS 214
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 163/223 (73%), Gaps = 11/223 (4%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G + DY+FKVVLIGDS VGKS +L+RF RNEF+L++K+TIGVEF TR++
Sbjct: 1 MAEGSNF-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K++KAQIWDTAGQERYRA+T+AYYRGAVGA+LVYDIS+ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPTE+AK FA + GL F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
IV+ K+L Q + SG I V CC
Sbjct: 174 IVSSKSLE----QSDDPIKPTSGDTITVSHSVDTPANAGGKCC 212
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 167/218 (76%), Gaps = 5/218 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G +++ DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ I K VK
Sbjct: 2 GAVDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD +R +F+++ RWL+ELR H D +VI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL+ +AV TE+A FA+KE ++F+ETSALE+ NV+NAF+ VLT+I+N+V+KK L
Sbjct: 122 VGNKADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTL 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ NG+ + G+ I + G K S CC T
Sbjct: 182 E----KENGSASVPKGETINI-GKDDVSDVKKSGCCST 214
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CCR
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCR 216
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
+FK+V++GDS VGKSQ+L RF +NEF + SK TIGVEF TRT+V+ HK VKAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ERY+A+T+AYYRGA A+L YDI+++Q+FDH+ +WL+ELR H DKNI+++L+GNKSDL
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNG 196
RAVPTE A++FAQ+EGLFFLETSAL+++NVE+AF+ +L++++ V++K + + N
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLILVDGHESNW 180
Query: 197 NPAS--LSGKKILVPG--PAQEIPAKSSMCC 223
+ + L G KI VP P + K CC
Sbjct: 181 DKVNLELEGTKIKVPSQEPECQNAKKRFNCC 211
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 169/224 (75%), Gaps = 14/224 (6%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAV T++AK F+ + GL F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
IV+ K+L + N P K+ + GP+ + A + S CC
Sbjct: 174 IVSSKSLES--STNNIEPP----KEGISVGPSLDSTATQGSKCC 211
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FKVVLIGDS VGKS +L+ F +NEFSL+SK+TIGVEF TR+L + K +KAQ
Sbjct: 6 ADDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ WL+ELR+H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL AV TEDAK FA+KE L+F+ETSA EATNVENAF VLT+I +IV+KK + A
Sbjct: 126 NKSDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSKKAMEA 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N P+ G KI + + K CC
Sbjct: 186 ASESANV-PS--KGDKIDIGKDVSAV--KKGGCC 214
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ DY+FK+VLIGDS VGKS +L+RF RNEFSL++K+TIGVEF TR++ + K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H + +V++L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAV TE+A EFA+KE ++F+ETSALE+ NV+NAF+ VLT+I+N+V++K L
Sbjct: 124 KADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETV 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCCRT 225
+ + A G+ I++ ++ A K S CC T
Sbjct: 184 DDDPS-TKALPKGETIVIGTKDDDVSAVKKSGCCST 218
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+F+VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQM 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
G + GN I VP + CC+
Sbjct: 182 VDRPGHDESPGNNVV----DISVPPTTDGLKGNKFQCCQ 216
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 165/213 (77%), Gaps = 5/213 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGK+ +L+RF RNEF+L+SK+TIGVEF TR++ + +K+VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ Q+++++ RWL+ELR HAD NIV++L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA GL F+ETSAL+++NVE AF +LTEI+ IV+ K L +
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALES- 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N +G+ I V P ++ + CC
Sbjct: 183 ---SNDVIRPTAGQTINVNQPTED-EKQGGGCC 211
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 147/175 (84%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+L YDI++RQ+FD++ RWL ELR H D NIVIIL GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
KSDL+ RAV +D + +KEGL FLETSALEA NV+ AF T+LT+I++I++KK
Sbjct: 126 KSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 165/214 (77%), Gaps = 3/214 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS + +RF RNEF L+SK+TIGVEF TRTL ++ + VKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+++ SF+++ RWL+ELR HAD NIVI+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL+ R V TEDA+ +A+KEGL F+ETSALEATNV+ AF T+L +I+ I++KK+L++
Sbjct: 127 TDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKSLSSSS 186
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ P G I + G Q P S CC T
Sbjct: 187 TDPSA-PNIKQGNTITIEGGLQ--PNTSKSCCTT 217
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 36 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 95
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 96 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 155
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA+K GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 156 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 215
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 163/220 (74%), Gaps = 6/220 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A + GN I VP CC+T
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQT 217
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 164/220 (74%), Gaps = 1/220 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + + DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 4 YNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM-CCRT 225
+ + E +GK +++ G A+S CC +
Sbjct: 184 MISQELNKQDVTRIENGKTVVLQGEGDVEAAQSKKGCCSS 223
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 155/182 (85%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+ + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ K +KAQ
Sbjct: 5 PDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+R SF++ RWL+ELR HAD+NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL+ RAV TE+ +++A GL F+ETSAL+A++VE AF+ +LT+I+ +V+K++L +
Sbjct: 125 NKSDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLAS 184
Query: 190 GE 191
G+
Sbjct: 185 GD 186
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 166/217 (76%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD IVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++ +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KMQCCQ 214
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ DY+FK+VLIGDS VGKS +L+RF RNEFSL++K+TIGVEF TR++ + K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RWL+ELR H + +V++L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAV TE+A E+A+KE ++F+ETSALE+ NV NAF+ VLT+I+N+V++K L
Sbjct: 124 KADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLETM 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCCRT 225
+ N + A G+ I++ ++ A K S CC T
Sbjct: 184 DDDPN-SKALPKGETIVIGTKDDDVSAVKKSGCCST 218
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 159/213 (74%), Gaps = 4/213 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD +++Q+F + RWL+ELR HADKNIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK D + R V T DA EFA + L F+ETSAL+ATNVE AF +LTEI+ IV+ K L
Sbjct: 122 NKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE- 180
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
G + NP L +K++ Q+ AK C
Sbjct: 181 -NGSSSQNP--LGDRKVIEISKTQDADAKQKCC 210
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ K +KAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 68
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+S+ +FD+I RWL+ELR HAD NI I+L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLVGNK 128
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL+ RAV T+DA +FA+ EGL ++ETSALEATNVE AF +L +I+ ++KK + + E
Sbjct: 129 TDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDE 188
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
G GK I V A + ++ CC T
Sbjct: 189 GGAGAAGGVKEGKTINV--AAGDANSEKKQCCST 220
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 161/215 (74%), Gaps = 8/215 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RN+F+L+SK+TIGVEF TR++ K++KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +++++ RWL ELR HAD NIVI+L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN--KKNLT 188
KSDL RAVPTE A A+K GL F+ETSAL++TNVE AF +LTEIF+IVN K+ T
Sbjct: 124 KSDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQLET 183
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ Q S+ G+ +V P K+ CC
Sbjct: 184 KKDSQ------SVDGETEVVQVGGDPAPKKAGACC 212
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 163/217 (75%), Gaps = 3/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
P ++ + P + CC+
Sbjct: 182 RDPPEGDTIRPTNVEAIDV---KPTVNTDSVRKQCCQ 215
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 162/206 (78%), Gaps = 8/206 (3%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIGDS VGKS +L+RF RNEF+LD+K+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE-GQGNGNP 198
VPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G+ GQ
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQ----- 196
Query: 199 ASLSGKKILVP-GPAQEIPAKSSMCC 223
A L ++ +V P+Q+ P CC
Sbjct: 197 AGLGDRRPVVDINPSQD-PETKQGCC 221
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++V+ K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ L F+ETSAL++TNVE AF +LTEI+ IV+ K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQI 181
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 154/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 166/223 (74%), Gaps = 4/223 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + + DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 4 YNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQ---EIPAKS-SMCCRT 225
+ + E +GK +++ G + E A+S CC +
Sbjct: 184 MMSQELNKQDVTRIENGKTVVLQGEGEGDGEADAQSKKRCCSS 226
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 25 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 84
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 85 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 144
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 145 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 204
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 164/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + GN I VP + CC+
Sbjct: 182 SDRSAHDESPGNNVV----DISVPPTTDGQKSNKLQCCQ 216
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 161/211 (76%), Gaps = 6/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF T+++V + K++KAQIWDTA
Sbjct: 174 DYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 233
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ SF+++ RWL+ELR HAD N VI+L+GNKSDL
Sbjct: 234 GQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNKSDL 293
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+A FA+K L F+ETSALEA V++AF +LTEI+ ++++K + A E Q
Sbjct: 294 RHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAEENQ- 352
Query: 195 NGNPASLSGKKILVPGPAQE--IPAKSSMCC 223
+ SG I++ E + K S CC
Sbjct: 353 ---ISIPSGDNIVITSDKTEEGVKKKKSSCC 380
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 165/215 (76%), Gaps = 3/215 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T++L I +K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD++R +++++ RWL+ELR H D NIV++LIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL AV T++AK A++EGL+F+ETSALEATNVENAF LT+I+ IV+KK + AG
Sbjct: 127 KSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAG 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ +G + A G+ I + K CC +
Sbjct: 187 D-EGATSSAPPKGETINIKDEGS--SWKKFGCCSS 218
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 165/213 (77%), Gaps = 5/213 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGK+ +L+RF RNEF+L+SK+TIGVEF TR++ + +K+VK+QI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ Q+++++ RWL+ELR HAD NIV++L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPTE+AK+FA GL F+ETSAL+++NVE AF +LTEI+ IV+ K L +
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALES- 182
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N +G+ I V P ++ + CC
Sbjct: 183 ---SNDVIRPTAGQTINVNQPTED-EKQGGGCC 211
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 159/181 (87%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + D++FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +++K++KAQI
Sbjct: 4 DDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ RAVPTE+A++FA++ L F+ETSALEA NV++AF T+LT+I++IV++K + A
Sbjct: 124 KSDLKHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQVAAP 183
Query: 191 E 191
E
Sbjct: 184 E 184
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/171 (68%), Positives = 147/171 (85%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RN FSLDSK+TIGVEF TRT+ ++ K VKAQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTA 75
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD+++ +F+++ RWL+ELR HAD NIV++LIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDL 135
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+ R+V EDA FA++EGL F+ETSAL+ATNV+ AF TVLTEI+ I++KK
Sbjct: 136 KHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 159/212 (75%), Gaps = 1/212 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ K +KAQIW
Sbjct: 8 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 67
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+S+ +F++I RWL+ELR HAD NI I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLVGNK 127
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL RAV T+DA+ FA+ EGL ++ETSALEATNVE AF +L +I+ ++KK + + E
Sbjct: 128 TDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDE 187
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G + K + + A+ CC
Sbjct: 188 -SGQGAAGGVKEGKTINVATGGDAAAEKKQCC 218
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 164/221 (74%), Gaps = 12/221 (5%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL R+VPT++A+ FA++ L F+ETSAL+ TNVE AF +LTEI+ IV+++ +
Sbjct: 122 VGNKSDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPM 181
Query: 188 TAGEGQ----GNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ GN P +S P + S CC+
Sbjct: 182 HDSPDEDSPPGNSGPIQIS--------PTEPNAGSKSNCCK 214
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 167/221 (75%), Gaps = 8/221 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF ++LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQKQI 181
Query: 188 ---TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+A E N +S + ++P CC++
Sbjct: 182 SDRSAHEDSPGNNVVDISVPPTMDGQRGNKLP-----CCQS 217
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 161/214 (75%), Gaps = 7/214 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RFAR+EFSL++++TIGVEF T+T+ + K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA++VYD+SRR +FD+ RWL ELR H D NIV++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLVGNK 128
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL RAV EDA FA++ G F +ETSAL+ATNVE AF VL +I+++V++ L G+
Sbjct: 129 ADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGD 188
Query: 192 GQGNGNPAS-LSGKKILVPGPAQEI-PAKSSMCC 223
+PA+ GK I V E+ P + CC
Sbjct: 189 -----DPAAPPRGKTIDVSAAKDEVSPVNAGGCC 217
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 151/187 (80%), Gaps = 1/187 (0%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
GY + + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K
Sbjct: 2 AGY-KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+ RWL+ELR H D NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
++LIGNKSDL V TED K FA+KE L+F+ETSALEATNVENAF VLT+I+ IV+K
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 185 KNLTAGE 191
+ + AG+
Sbjct: 181 RAVEAGD 187
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP + CC+
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGQKSNKLQCCQ 216
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 158/210 (75%), Gaps = 4/210 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK VLIGDS VGKS +L RF RNEF+++SK+TIGVEF TR +V+ +K +KAQIWDTA
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDI+++ SFD++ RWL+ELR HAD NIVI+L+GNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGNKTDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TE+A+ FA + L F+ETSA++A+NVE AF TVLTEIF IV+ + A EG
Sbjct: 128 LHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNR---AMEGGD 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSS-MCC 223
G S + P +KSS CC
Sbjct: 185 EGAHPSAGQTLNIAPTIGDSGKSKSSGQCC 214
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 158/192 (82%), Gaps = 2/192 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGN 197
+ +G + GN
Sbjct: 182 SDRSGHDESPGN 193
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ D+++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H + NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E FF+ETSALEA NVENAF VL++I+ + +KK L
Sbjct: 126 NKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ G+ I V K CC
Sbjct: 186 GDDH----TTLPKGQSINVGSKDDVSEVKKVGCC 215
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 156/185 (84%), Gaps = 2/185 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
GD N+ DY+FKVVLIGDS VGKS +L+RF RNEFSLDSK+TIGVEF T+++V + K++K
Sbjct: 3 GDDNE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+++ +F+++ RWL+ELR HA+ NIV++L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL+ QRAVPTE+A A++ L F+ETSAL+A+ V+ AF +LTEI+ ++NKK L
Sbjct: 122 VGNKSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQL 181
Query: 188 TAGEG 192
A EG
Sbjct: 182 -ASEG 185
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 149/180 (82%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
GD Q DY+FK+VL+GDS+VGKS +LARFARNEF +SK+TIGVEFQT+ LVI K +K
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD + RWL EL +H+D N+V IL
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL+ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+ I+++K+L
Sbjct: 125 VGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKDL 184
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 159/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQ+WDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQVWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD+SR +F+++ RWL+ELR H D NIV++L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGL-FFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
RAV TED+ F E FF+ETSALE+ NVENAF VLT+I+ +V+KK L G+
Sbjct: 131 RHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGD-- 188
Query: 194 GNGNPASLSGKKILVPGPAQEI-PAKSSMCC 223
+P +L + + G ++ P K S CC
Sbjct: 189 ---DPTALPKGQTINVGSRDDVSPVKKSGCC 216
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 151/187 (80%), Gaps = 1/187 (0%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
GY + + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K
Sbjct: 2 AGY-KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+ RWL+ELR H D NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
++LIGNKSDL V TED K FA+KE L+F+ETSALEATNVENAF VLT+I+ IV+K
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 185 KNLTAGE 191
+ + AG+
Sbjct: 181 RAVEAGD 187
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 168/215 (78%), Gaps = 1/215 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + +K+VK
Sbjct: 2 ANKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAV A+LVYDI++ +++++ RWL+EL+ HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL RAVPT++AK FA+K L F+ETSAL++TNVE AF +LT+I++IV++K +
Sbjct: 122 VGNKNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+ EG + +P+ + + P + KS C
Sbjct: 182 RS-EGDNDPSPSRDNIPITIAPTDPTDSRKKSCAC 215
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 163/226 (72%), Gaps = 18/226 (7%)
Query: 11 NQKIDYVFK--------------VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQT 56
N + D++FK +VLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF T
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFAT 62
Query: 57 RTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELR 116
R++ + K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR
Sbjct: 63 RSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELR 122
Query: 117 SHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
HAD NIVI+L+GNKSDL RAVPT++AK+FA + L F+ETSAL+A+NVE AF +LT
Sbjct: 123 DHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 182
Query: 177 EIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
EI+ IV+ K L G+ A LS + + A + +K C
Sbjct: 183 EIYRIVSSKAL----DNGDSGQAPLSSGRTIEVSKAPDTESKQGCC 224
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 157/203 (77%), Gaps = 3/203 (1%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 31 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 90
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 91 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 150
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPT++AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K + G G+ A
Sbjct: 151 VPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAIIEG---GDSGQA 207
Query: 200 SLSGKKILVPGPAQEIPAKSSMC 222
+LS + + + +K C
Sbjct: 208 TLSSGRTIEVSKTPDTESKQGCC 230
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 --TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADCAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 162/209 (77%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VKAQIWDTA
Sbjct: 34 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 93
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +++ + RWL+ELR HAD+NIVI+L+GNKSDL
Sbjct: 94 GQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSDL 153
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK +A+K L F+ETSAL++TNVE AF +LTEI+ V+ K+ G+ +
Sbjct: 154 RHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHF-GGDDRV 212
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+P +G +V P + P CC
Sbjct: 213 QVSPVGTNG---IVISPTTD-PQTKKQCC 237
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 156/212 (73%), Gaps = 4/212 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRT-LVIQHKSVKAQIWDT 73
DY+FKVVL GDS VGKS +L+RF RN+FS DS++TIGVEF TR + + K VKAQIWDT
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIVKAQIWDT 70
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D N VI+L+GNK+D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKAD 130
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L RA+ TE+ K+FA++E FF+ETSALEA NVENAF VLT+I+ +V+KK L AG+
Sbjct: 131 LNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDP 190
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
P G+ I V K S CC T
Sbjct: 191 TTALP---KGQMINVGSRDDVSAVKKSGCCAT 219
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 153/180 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 163/216 (75%), Gaps = 6/216 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT-- 188
KSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ G+ GN I VP + CC+
Sbjct: 185 SAHGESPGNNVV----DISVPPTTDGQKSNKLQCCQ 216
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP + CC+
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGQKSSKLQCCQ 216
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 163/220 (74%), Gaps = 6/220 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A + GN I VP CC++
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQRPNKLQCCQS 217
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 9 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 68
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 128
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 129 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 188
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 189 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 223
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 166/220 (75%), Gaps = 5/220 (2%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y Q DY+FK+VLIGDSAVGKS +LAR+ARNEF +SK+TIGVEFQT+T+ I K +
Sbjct: 4 YAGEEQTEDYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA++VYDISRRQ+FD+I RWL+EL +H+D N+V +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTV 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
++GNK+DL + R V TE+ A+ + ++F+ETSAL++TNV+ AF TV+ EI+NI+++K
Sbjct: 124 IVGNKTDLLDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSS---MCC 223
L+ E + + +GK +++ E AK + CC
Sbjct: 184 LSCQEQKLESKIS--NGKTVVLQEAESESTAKQTGKLWCC 221
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 162/213 (76%), Gaps = 3/213 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGD+ VGKS +L+RF RNEFSL+SK+TIG EF TR++ + K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ SFD++ RWL+EL+ HAD NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ +AV T+DA FA+ GL F+ETSAL+ + VE AF ++L+EI+ + +KK L G
Sbjct: 125 KSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKALEKG 184
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N A + + I++ PA E + + CC
Sbjct: 185 ---STSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV +K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP + CC+
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGLKGSKFQCCQ 216
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 151/187 (80%), Gaps = 1/187 (0%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
GY + + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K
Sbjct: 2 AGY-KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGK 60
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+ RWL+ELR H D NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
++LIGNKSDL V TED K FA+KE L+F+ETSALEATNVENAF VLT+I+ IV+K
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 185 KNLTAGE 191
+ + AG+
Sbjct: 181 RAVEAGD 187
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 --TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADCAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPTKLQCCQ 216
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 168/215 (78%), Gaps = 5/215 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + +K+VKAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++++ WL+EL+ HAD NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAVPT++AK FA+K GL F+E SAL++TNVE AF +LTEI+ IV+++ L G
Sbjct: 125 KSDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGG 184
Query: 191 EGQGN-GNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + ++ K+L P Q+ A+ + CC+
Sbjct: 185 QPESEFSHGTTIEPIKVL---PTQQ-GARETPCCQ 215
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 162/214 (75%), Gaps = 7/214 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RFAR+EFSL++++TIGVEF T+T+ + + VKAQIW
Sbjct: 14 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIW 73
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA++VYD++RR +F++ RWL+ELR H D NIV++L+GNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGNK 133
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL RAVP EDA+ FA+ G F +ETSALEATNVE AF VL +I+ +V++ L G+
Sbjct: 134 ADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIGD 193
Query: 192 GQGNGNPAS-LSGKKILVPGPAQEI-PAKSSMCC 223
+PA+ G+ I V + P SS CC
Sbjct: 194 -----DPAAPPRGRTIDVSAKDDAVTPVNSSGCC 222
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 159/212 (75%), Gaps = 2/212 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ K +KAQIW
Sbjct: 8 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 67
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+S+ +F++I RWL+ELR HAD N I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLVGNK 127
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL RAV T+DA+ FA+ EGL ++ETSALEATNVE AF +L +I+ V+KK + + E
Sbjct: 128 TDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKPVASDE 187
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G GK I V A + A CC
Sbjct: 188 -VGAGQGGVKEGKTIDVATGA-DAAAHKKQCC 217
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 158/192 (82%), Gaps = 2/192 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGN 197
+ +G + GN
Sbjct: 182 SDRSGHEESPGN 193
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 165/220 (75%), Gaps = 6/220 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF VLTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + GN I VP + CC++
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTSDGQKGNKIQCCQS 217
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 162/222 (72%), Gaps = 12/222 (5%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y D++FKVVLIGDS VGKS +L+RF RNEF +DSK+TIGVEF TR++
Sbjct: 1 MAEGSNY-------DFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++D + RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPTE+AK F+ + L F+ETSAL+A+NV++AF T+LT I+
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYR 173
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IV+ K+L + + +P + P++S C
Sbjct: 174 IVSSKSL-----EQSADPIRAPTSDTIPVAIDSSAPSQSKCC 210
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ +++ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VK
Sbjct: 2 GNRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK DL RAVPT++AK FA++ L F+ETSAL++TNVE AF +LTEI+ IV+++ L
Sbjct: 122 VGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQL 181
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS GKS +L+RF RNEFSLDS++TIGVEF TR++ + K++KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD NIV++L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI++IV+ K L Q
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKAL-----QS 182
Query: 195 NGNPASLSGKKILVPGPAQEI--PAKSSMCC 223
+ + SG + + P+ + K CC
Sbjct: 183 SDDVIKPSGGETISVQPSTDDGGQTKKGGCC 213
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 169/230 (73%), Gaps = 12/230 (5%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA GG D Q DY+FK+VL+GDS+VGKS +LARFARNEF +SK+TIGVEFQT+ LV
Sbjct: 1 MAYGG---DEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLV 57
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I K +KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI+RRQ+FD + RWL EL +H+D
Sbjct: 58 IDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSD 117
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
N+V ILIGNK+DL+ R V + K A+ +GLFF+ETSAL+++NV AF TV+ EI++
Sbjct: 118 MNVVTILIGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYS 177
Query: 181 IVNKKNLTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSS----MCCRT 225
I+++K + E Q SLS GK +++ A P+ +S CC +
Sbjct: 178 ILSRKVFQSQE-QKKSELQSLSNGKAVVLQSDA---PSATSSGGRWCCSS 223
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 159/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS GKS +L+RF RNEFSL+SK+TIGVEF TR++ + K+VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L Q
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKAL-----QS 182
Query: 195 NGNPASLSGKKILVPGPAQEI--PAKSSMCC 223
+ + SG + + P+ + K + CC
Sbjct: 183 SDDVIKPSGGETITVQPSADDGGQTKKNGCC 213
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 147/172 (85%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQ
Sbjct: 13 PRGSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 72
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+G
Sbjct: 73 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 132
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
NKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ I
Sbjct: 133 NKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 165/233 (70%), Gaps = 16/233 (6%)
Query: 4 GGGYGDP----------NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
G G DP + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVE
Sbjct: 19 GCGVADPAGSARTMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 78
Query: 54 FQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLE 113
F TR++ + K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+
Sbjct: 79 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLK 138
Query: 114 ELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMT 173
ELR HAD NIVI+L+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF
Sbjct: 139 ELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKN 198
Query: 174 VLTEIFNIVNKKNLT--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+LTEI+ IV++K + A + GN I VP CC+
Sbjct: 199 ILTEIYRIVSQKQIADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 247
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ S++++ RWL ELR HAD+NI+I+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL R++PTE+AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQM 181
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 165/224 (73%), Gaps = 19/224 (8%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 62 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 121
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 122 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 181
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 182 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 241
Query: 188 T--AGEGQGNGN-------PASLSGKKILVPGPAQEIPAKSSMC 222
A + GN P + G+K P+K C
Sbjct: 242 ADRAAHDESPGNNVVDISVPPTTDGQK----------PSKLQCC 275
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 166/219 (75%), Gaps = 11/219 (5%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+KIDYVFKVV+IGDSAVGK+Q+L+RF NEF DSK+TIGVEFQTRT+ ++ K VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIW 82
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAM+VYDI++R SFDH+ RW+EELR+HAD + VI+L+GNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 132 SDLE-EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN--IVNKKNLT 188
+DL +RAVPTEDA EFA+ + LFF E SAL NV+ AF +L EIF+ +V++K
Sbjct: 143 ADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRK--- 199
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQE---IPAKSSMCC 223
A E G G L G +I ++ G E I ++S C
Sbjct: 200 AMESDG-GATVKLDGSRIDVISGSDLETSNIKEQASCSC 237
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 147/177 (83%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS GKS +L+RF RNEFSL+SK+TIGVEF TR++ + K+VKAQIWDTA
Sbjct: 226 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 285
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 286 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 345
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
RAVPT++AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L + +
Sbjct: 346 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSD 402
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 154/187 (82%), Gaps = 7/187 (3%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 1 MAEGSNF-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIN 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD
Sbjct: 54 VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
NIVI+L+GNKSDL+ RAVPT++AK FA + L F+ETSAL+A+NVE+AF T+LT+I+
Sbjct: 114 SNIVIMLVGNKSDLKHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYR 173
Query: 181 IVNKKNL 187
IV+ K+L
Sbjct: 174 IVSSKSL 180
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 50 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 109
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 110 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 169
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 170 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 229
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 161/211 (76%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAVPT++AK F+ + GL F+ETSAL+A+NVE AF T+LT+I+ IV+ K L Q
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKALE----QA 183
Query: 195 NGNPASLSGKKILVPGPAQEIPA--KSSMCC 223
+ G I V P + PA + CC
Sbjct: 184 ADSIKPTQGDSIPVR-PTLDAPANKEGGKCC 213
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T+T ++ K VKAQ
Sbjct: 6 ADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+L+YD++R +F++ RWL ELR H D NIV++LIG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK DL AV TE+AK FA++E L+F+ETSAL+ATNVENAF VLT+I IV+K+++
Sbjct: 126 NKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSV-- 183
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G A L GK + K CC
Sbjct: 184 ---DGGGESADLPGKGETINVKEDGSVLKRMGCC 214
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 164/220 (74%), Gaps = 11/220 (5%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
+IDYVFKVV++GDSAVGK+Q+L RF ++EF LDSK+TIGVEFQTRTL + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGA+GAM+VYDI+RR++F+++ RW+EELR+HAD + V+ LIGNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 133 DLEE-QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
D+ +R V ++A FA+++GLFF E SAL NV+ AF+T+L EIF +V+++ L E
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 192 -------GQGNGNPASLSGKKILVPGPAQEIPA--KSSMC 222
G G G SL G + V G E A KSS C
Sbjct: 198 ARRMRDGGAGGGEVLSLKGTTLDV-GSIMETSAMKKSSQC 236
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 161/207 (77%), Gaps = 9/207 (4%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGN-------PASLSGKK 205
A + GN P + G+K
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQK 208
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 168/227 (74%), Gaps = 21/227 (9%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGN-------PASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + GN P + G+K +P CC++
Sbjct: 182 ADRSAHDESPGNNVVDISVPPTTDGQKNKLP------------CCQS 216
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ET+AL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 162/212 (76%), Gaps = 5/212 (2%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FKVVLIGDSAVGKS +L+R+ARNEF+ +SKATIGVEFQT+++ I K +KAQIW
Sbjct: 7 QSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKELKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RAVTSAYYRGAVGA++VYDI+RR +F+++ RW +EL+ H+D N+V++L+GNK
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVMLVGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDL R V E+A A+K ++F+ETSALEA NV AF TVL EI IV+KK LTA
Sbjct: 127 SDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKALTADP 186
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+GN A SG+++ G P +++ CC
Sbjct: 187 NKGNTVVA--SGQRL--AGSDDTTP-RTTACC 213
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP CC+
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGQKGSKLQCCQ 216
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 164/220 (74%), Gaps = 6/220 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + GN I VP CC++
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGQKGNKLQCCQS 217
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 157/211 (74%), Gaps = 9/211 (4%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
+IDYVFK+V+IGD AVGKSQ+L+ FARNEFSLDSK TIGVEF TR++ + K VKAQIWD
Sbjct: 9 RIDYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWD 68
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERY A+TSAYYRGA GA+LVYD++R +F+ + RWL+ELR H D NIVI+L+GNK+
Sbjct: 69 TAGQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKA 128
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DL RAV TEDAK FA+KE +FF+ETSA + TNV+ +F T+LT+I+ I++KK+L A
Sbjct: 129 DLRHLRAVSTEDAKAFAEKESIFFMETSA-QDTNVKTSFETLLTDIYRILSKKSLVADTY 187
Query: 193 QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ A L G + GP CC
Sbjct: 188 VDSLTVARLLGGTKISVGPGG--------CC 210
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE +F +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQM 181
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 154/180 (85%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ D++FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIW
Sbjct: 5 EEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI++ S++++ RWL+ELR HAD NIVI+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDL+ RAVP E+A +FA++ L F+ETSAL++TNVE AF +LT I+ +V+++++ AGE
Sbjct: 125 SDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKAGE 184
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE +F +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQM 181
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD ++ Q+F + RWL+ELR HADKNIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK D + RA+ T+ EFA+ L F+ETSAL+ATNVE AF +LTEI+ IV+ K L
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALEN 181
Query: 190 G-EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
G GQ NP L +K++ +Q+ AK C
Sbjct: 182 GTSGQ---NP--LGDRKVVEITKSQDADAKQKCC 210
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 157/213 (73%), Gaps = 4/213 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
N + D++FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD ++ Q+F + RWL+ELR HADKNIVI+L+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK D + RA+ T+ EFA+ L F+ETSAL+ATNVE AF +LTEI+ IV+ K L
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE- 180
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
GN L +K++ +Q+ AK C
Sbjct: 181 ---NGNSGQNPLGDRKVVEITKSQDADAKQKCC 210
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD +IVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP CC+
Sbjct: 182 AERSAHDESPGNNVV----DISVPPTTDSQRGGRLQCCQ 216
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 163/210 (77%), Gaps = 4/210 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++A+ FA+K GL F+ET AL++TNVE AF T+LTEI+ IV +K ++ + +
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMS--DRRE 178
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
N S + I VP + P CC+
Sbjct: 179 NDMFPSNNVVPIHVPPTTENKP--KVQCCQ 206
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRG VGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP + CC+
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGQKSSKLQCCQ 216
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP CC+
Sbjct: 182 AERSAHDESPGNNVV----DISVPPTTDGQRGSKLQCCQ 216
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 152/181 (83%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF RN+F+L+SK+TIGVEF T++L I K +KAQI
Sbjct: 7 HDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D N+V++LIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL VPTED K FA++E L+F+ETSAL+ATNVE+AF VL++I+ IV+K+++ AG
Sbjct: 127 KCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEAG 186
Query: 191 E 191
+
Sbjct: 187 D 187
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 150/173 (86%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
+ FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++
Sbjct: 260 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 312
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 159/212 (75%), Gaps = 6/212 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++V + K++KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +F+++ RWL+ELR HAD N VI+L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TE+A FA+K L F+ETSALEAT V++AF +LTEI+ ++++K + A E
Sbjct: 130 RHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRKTIQAEENAS 189
Query: 195 NGNPASLSGKKILVPG---PAQEIPAKSSMCC 223
P +G I + + K S CC
Sbjct: 190 ASLP---TGNSIAITAENTTESQKKKKKSGCC 218
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 165/218 (75%), Gaps = 5/218 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G +++ DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ I K VK
Sbjct: 2 GAADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD +R +F+++ RWL+ELR H D +VI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL AV TE+A FA+KE ++F+ETSALE+ NV++AF+ VLT+I+N+V+K+ L
Sbjct: 122 VGNKTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRAL 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ NG+ + G+ I + G K S CC T
Sbjct: 182 E----KENGSASVPKGETINI-GRDDVSEVKKSTCCST 214
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 159/213 (74%), Gaps = 4/213 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF N+F+L+SK+TIGVEF TRT+ +++K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS++ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG---E 191
RAVPTE+AK FAQ+ L F ETSAL + NV+ AF ++T I+ +++K + G
Sbjct: 131 SHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGSDNN 190
Query: 192 GQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
G GNG ++ G I L P P ++ + S+ CC
Sbjct: 191 GSGNGASNNIKGPTISLTPTPNEKTKSSSNNCC 223
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 164/220 (74%), Gaps = 10/220 (4%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
+IDYVFKVV++GDSAVGK+Q+L RF ++EF LDSK+TIGVEFQTRTL + K VKAQIWD
Sbjct: 26 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 85
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGA+GAM+VYDI+RR++F+++ RW+EELR+HAD + V+ LIGNK+
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 145
Query: 133 DL-EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
D+ +R V ++A FA+++GLFF E SAL NVE AF+T+L EIF +V+++ L E
Sbjct: 146 DMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALELDE 205
Query: 192 GQGNGNPASLSGKKILV-------PGPAQEIPA--KSSMC 222
+ N + +G ++L G E A KSS C
Sbjct: 206 ARRMRNGGAGAGGEVLSLKGTTLDVGSIMETSAMKKSSQC 245
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 159/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS GKS +L+RF RNEFSL+SK+TIGVEF TR++ + K+VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L Q
Sbjct: 128 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKAL-----QS 182
Query: 195 NGNPASLSGKKILVPGPAQEI--PAKSSMCC 223
+ + SG + + P+ + K + CC
Sbjct: 183 SDDVIKPSGGETITVQPSADDGGQTKKNGCC 213
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 150/173 (86%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
R+VPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 129 RHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP CC+
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGQKGNKLQCCQ 216
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 162/220 (73%), Gaps = 6/220 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T ++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A + GN I VP CC++
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQRPNKLQCCQS 217
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 162/216 (75%), Gaps = 6/216 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT-- 188
KSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP + CC+
Sbjct: 185 SAHDESPGNNVV----DISVPPTTDGQKSNKLQCCQ 216
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 161/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYR +TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 166/221 (75%), Gaps = 8/221 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV+++ +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQI 181
Query: 188 ---TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+A + N +S + ++P CC++
Sbjct: 182 ADRSAHDDSPGNNVVDISVPPTMDGQRGNKLP-----CCQS 217
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 149/176 (84%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +
Sbjct: 16 GRAMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG 75
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NI
Sbjct: 76 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 135
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
VI+L+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+
Sbjct: 136 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 160/209 (76%), Gaps = 6/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+ +SKATIGVEFQT+ + I K VKAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD++ RWLEEL+ HAD N+V +L+GNKSDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R VP ED ++ A+ EGLFF+ETSAL+ TNV AF V+ EI+N V+KK L + +
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNSDSYK- 186
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ SL+ KI+ ++ P CC
Sbjct: 187 --SELSLNRVKIM---DGEDPPKTKYSCC 210
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 163/213 (76%), Gaps = 8/213 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL---VIQHKSVKAQIW 71
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K++KAQIW
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGKTIKAQIW 69
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI++ +F+++ RWL+ELR HAD NIVI+L+GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIVIMLVGNK 129
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDL+ R V TE A+ F ++EGL F+ETSAL++TNVE AF +LTEI++IV+KK L + +
Sbjct: 130 SDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVSKKVLDSED 189
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSS-MCC 223
+ P G+ ++V + AK CC
Sbjct: 190 NR----PKIGEGRDLIVIDKQHDDGAKKKGGCC 218
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 161/214 (75%), Gaps = 7/214 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RFAR+EFSL++++TIGVEF T+T+ + K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA++VYD++RR +FD+ RWL ELR H D NIV++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGNK 128
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL RAV EDA FA++ G F +ETSAL+ATNV+ AF VL +I+++V++ L GE
Sbjct: 129 ADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNALDIGE 188
Query: 192 GQGNGNPAS-LSGKKILVPGPAQEI-PAKSSMCC 223
+PA+ GK I V E+ P + CC
Sbjct: 189 -----DPAAPPRGKTIDVGAAKDEVSPVNTGGCC 217
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL R+VPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 163/213 (76%), Gaps = 10/213 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FKVVLIGDS VGKS +L+RF RNEF++DSK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAGEGQ 193
RAVPTE+A+ FA + L F+ETSA++A+NVE AF +LT+I+ IV+ K L ++ +
Sbjct: 128 RHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADAV 187
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSS---MCC 223
G P SG I V P + +K+S CC
Sbjct: 188 G---PT--SGSTITVT-PTSDDASKASGGGKCC 214
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 153/191 (80%), Gaps = 7/191 (3%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G Y DY+FKVVLIGDS VGKS +L+RF RNEF+ DSK+TIGVEF TR+L
Sbjct: 1 MAEGSNY-------DYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLE 53
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
+ K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDIS++ +F ++ RWL+ELR HAD
Sbjct: 54 VDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHAD 113
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+IV++L+GNKSDL+ RAV T++AK+FA GL F+ETSAL+A+NVE AF +LT+I+
Sbjct: 114 SSIVVMLVGNKSDLKHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYR 173
Query: 181 IVNKKNLTAGE 191
IV+ K+L A +
Sbjct: 174 IVSSKSLDAAD 184
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 159/212 (75%), Gaps = 6/212 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++V + K++KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +F+++ RWL+ELR HAD N VI+L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TE+A FA+K L F+ETSALEAT V+ AF +LTEI+ ++++K + A E
Sbjct: 130 RHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRKTIQAEE--- 186
Query: 195 NGNPASLSGKKILVPG---PAQEIPAKSSMCC 223
N + +G I + + K S CC
Sbjct: 187 NATASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 160/214 (74%), Gaps = 7/214 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RFAR+EFSL++++TIGVEF T+T+ + K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA++VYD+SRR +FD+ RWL E R H D NIV++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLVGNK 128
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL RAV EDA FA++ G F +ETSAL+ATNVE AF VL +I+++V++ L G+
Sbjct: 129 ADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGD 188
Query: 192 GQGNGNPASLS-GKKILVPGPAQEI-PAKSSMCC 223
+PA+ GK I V E+ P + CC
Sbjct: 189 -----DPAAPPRGKTIDVSAAKDEVSPVNAGGCC 217
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 147/171 (85%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ + VKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+++ SF+++ RWL+ELR HAD NIVI+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
+DL+ R V TEDA+ +A+KEGL F+ETSALEATNV+ AF T+L +I+ I+
Sbjct: 127 TDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 161/214 (75%), Gaps = 7/214 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RFAR+EFSLD+++TIGVEF T+T+ + K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLVKAQIW 68
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA++VYD++R +F++ RWL ELR H D NIV++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVMLVGNK 128
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL RAVP E+A+ FA++ F +ETSALE+TNVE AF VL EI+ +V+KK L G+
Sbjct: 129 ADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKALDIGD 188
Query: 192 GQGNGNPASLS-GKKILVPGPAQEI-PAKSSMCC 223
+PA+ GK I V E+ P + CC
Sbjct: 189 -----DPAAPPRGKTINVGAAKDEVSPVNTGGCC 217
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 161/207 (77%), Gaps = 4/207 (1%)
Query: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQE 77
F VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 78 RYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQ 137
RYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 138 RAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGN 197
RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++ + + N
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS--DRRENDM 178
Query: 198 PASLSGKKILVPGPAQEIPAKSSMCCR 224
S + I VP + P CC+
Sbjct: 179 SPSNNVVPIHVPPTTENKP--KVQCCQ 203
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 166/219 (75%), Gaps = 11/219 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+ +GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL RAVPTE+AK +++K GL F+ETSAL++TNVE AF +LTEI++IV++ +
Sbjct: 125 KCDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSS---- 180
Query: 191 EGQGNGNPAS--LSGKKILVP--GPAQEIPAKSSMCCRT 225
N P++ L + + P G Q+ K CCR+
Sbjct: 181 --TANDVPSAPELGERTTIKPTEGDQQQASGK-RQCCRS 216
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 165/227 (72%), Gaps = 21/227 (9%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K +K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQI 181
Query: 188 T--AGEGQGNGN-------PASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + GN P + G+K +P CC++
Sbjct: 182 ADRSAHDESPGNNVVDISVPPTTDGQKNKLP------------CCQS 216
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 153/181 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+ L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T 188
+
Sbjct: 182 S 182
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 159/216 (73%), Gaps = 3/216 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ +S++ + RWL+ELR HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPTE+AK FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+ G+ P+ G I L P P ++ K+S CC
Sbjct: 187 TNDTVGSSKPS--GGPTISLTPAPQEKRSGKNSNCC 220
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 151/180 (83%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ S++++ RWL ELR HAD+NI+I+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL R++PTE+AK FA+ GL F+ETSAL++TNVE AF +LTEI+ IV+++ +
Sbjct: 122 VGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM 181
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++ NVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + GN I VP CC+
Sbjct: 182 ADRSAHDESPGNNVV----DISVPPTTDGQKGSKLQCCQ 216
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 151/182 (82%), Gaps = 2/182 (1%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
G GD ++ DY+FKVVLIGDS VGKS +LARF RNEF+L+SK+TIGVEF TR++ + K
Sbjct: 2 GTGD--EEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKI 59
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ ++ ++ RWL ELR HAD+NIVI
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVI 119
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNKSDL RAVP ++A FA+ L F+ETSAL++TNVE AF +LTEI+NIV++K
Sbjct: 120 MLVGNKSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQK 179
Query: 186 NL 187
+
Sbjct: 180 QM 181
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 150/173 (86%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
+VF VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAG
Sbjct: 78 FVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 137
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 138 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 197
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++
Sbjct: 198 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 250
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 152/177 (85%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 60
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GN
Sbjct: 61 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 120
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
KSDL R+VPT++A+ FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 121 KSDLRHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 177
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 164/221 (74%), Gaps = 5/221 (2%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + + DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 4 YSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+FD + +WL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ + LFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRK- 182
Query: 187 LTAGEGQGNGNPASLSGKKILVPGP-AQEI---PAKSSMCC 223
+ + E P +GK +++ G +QE P CC
Sbjct: 183 VMSNEFNKQDAPLMGNGKTVVLQGDGSQEAIAEPRNGGGCC 223
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 160/220 (72%), Gaps = 12/220 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DYVFKVV+IGDS VGK+Q+L RF R+EF LDSK+TIG+EFQTRT+++ K VKAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRAVTSAYYRGA+GAMLVYD++RR SF+H RW+ ELR+HADK+IV++LIGNK+DL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 135 EE----QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL--- 187
+RAV E+A FA+++GLFF E SAL NVE AF+ +L EI V+++ L
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPLEVD 191
Query: 188 -----TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
GE G SLS + ++ A + P++ S C
Sbjct: 192 DGGAGGDGELMLKGTRLSLSQELSMMETSAMKTPSRCSSC 231
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 162/215 (75%), Gaps = 3/215 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T++L I K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+T AYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GN
Sbjct: 67 WDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL AV TE+AK A++E L+F+ETSALEATNVENAF LT+I+ IV+KK + AG
Sbjct: 127 KSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAG 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ +G + A G+ I + K CC +
Sbjct: 187 D-EGATSTAPPKGQTINIKDEGS--AWKKFGCCSS 218
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 165/225 (73%), Gaps = 16/225 (7%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
Y D + DY+FKVVLIGDSAVGKS +L+R+ARNEF+L+SKATIGVEFQT+++ I K
Sbjct: 2 AYNDDKSE-DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKE 60
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
+KAQIWDTAGQER+RAVTSAYYRGAVGA++VYDISR+ +FD++ RWL+ELR H+D ++V+
Sbjct: 61 IKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVV 120
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNK DL+ R V E+A AQ E + F+ETSA++ATNV NAF +V+ EI+ +V+KK
Sbjct: 121 MLVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKK 180
Query: 186 NLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSM-----CCRT 225
LT +S+S K V G +Q + + CC T
Sbjct: 181 PLT----------SSVSMKSNTVLGSSQRLAGIDDIQPKRNCCST 215
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 166/220 (75%), Gaps = 7/220 (3%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
G G P Q + +VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K
Sbjct: 44 GTRGHPLQSL---IEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 100
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIV
Sbjct: 101 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV 160
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
I+L+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++
Sbjct: 161 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 220
Query: 185 KNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
K ++ + + N S + I VP + P CC+
Sbjct: 221 KQMS--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 256
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 146/176 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K+VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
+ RAVPT++AK F+ GL F+ETSAL+ NVE AF +LT+I+ IV+ K L A
Sbjct: 128 KHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEAA 183
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/185 (62%), Positives = 152/185 (82%), Gaps = 2/185 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYR +TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 63 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 122
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT--AGEG 192
RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K + A
Sbjct: 123 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHD 182
Query: 193 QGNGN 197
+ GN
Sbjct: 183 ESPGN 187
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 154/208 (74%), Gaps = 2/208 (0%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FKVVLIGDS VGKS +L+RFARNEF+ DSK+TIGVEF TR++ K++K+QIWDTAG
Sbjct: 8 YLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWDTAG 67
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QERYRA+TSAYYRGAVGA+LVYDIS++++F+ + RWL+ELR HAD +IVI+L+GNKSDL+
Sbjct: 68 QERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNKSDLK 127
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
RAVPTE+AKEFA + L F+ETSAL+ NVE AF +L ++ +V+ K + +
Sbjct: 128 SLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAMENESNRVA 187
Query: 196 GNPASLSGKKILVPGPAQEIPAKSSMCC 223
P +GK I V S CC
Sbjct: 188 TGPG--AGKSITVAPTTTNAKPASGKCC 213
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 146/170 (85%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+VK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTE 177
+GNKSDL RAVPT++A+ FA+K GL FLETSAL++TNVE AF T+LTE
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 149/173 (86%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+S +TIGVEF TR++ + K++KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
R+VPT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 129 RHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 157/216 (72%), Gaps = 1/216 (0%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDI++ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPTE+AK FAQ+ L F+E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
E G P + G I L P P + + CC
Sbjct: 187 TNEQGGVNKPTTAGGPTISLTPAPQSKKNKNNGGCC 222
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 162/208 (77%), Gaps = 4/208 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
+ K+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQ
Sbjct: 31 IIKMVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 90
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 91 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 150
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNG 196
RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++ + + N
Sbjct: 151 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS--DRREND 208
Query: 197 NPASLSGKKILVPGPAQEIPAKSSMCCR 224
S + I VP + P CC+
Sbjct: 209 MSPSNNVVPIHVPPTTENKPKMQ--CCQ 234
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 157/215 (73%), Gaps = 1/215 (0%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPT++AK FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
EG NGN S L P P ++ +S CC
Sbjct: 187 TNEG-SNGNKPSGGPTISLTPAPQEKKSKNNSNCC 220
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 148/172 (86%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
V VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQ
Sbjct: 171 VSPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 230
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 231 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 290
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++
Sbjct: 291 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 342
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 162/217 (74%), Gaps = 5/217 (2%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
DP + DY+FKVVLIGDSAVGKS +L+R+ARNEF ++SKATIGVEFQT+++ K +KA
Sbjct: 4 DPGE--DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKA 61
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDISRR +F+ + RWL+EL+ H+D NIV +L+
Sbjct: 62 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLV 121
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE R VP E++K A+ E LFF+ETSAL ATNV +AF V+ E++N +++K L
Sbjct: 122 GNKCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALN 181
Query: 189 AGEGQGNGNPASLSGKKILVPG--PAQEIPAKSSMCC 223
+ + + ++ S K LVP A + K CC
Sbjct: 182 S-DSYKSKLLSNRSTKVSLVPNGDAATKTELKKYACC 217
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 148/176 (84%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +
Sbjct: 16 GRAMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG 75
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K++KAQIWDTAG ERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NI
Sbjct: 76 KTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 135
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
VI+L+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+
Sbjct: 136 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 158/206 (76%), Gaps = 3/206 (1%)
Query: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQE 77
F++VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 78 RYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQ 137
RYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 138 RAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGN 197
RAVPT++AK FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K + + + N
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIR--DSPDDDN 182
Query: 198 PASLSGKKILVPGPAQEIPAKSSMCC 223
S + + I V P + CC
Sbjct: 183 SPSNNVQTIHV-APTDNAAPRQQKCC 207
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++ + + N
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS--DRRENDMSP 180
Query: 200 SLSGKKILVPGPAQEIPAKSSMCCR 224
S + I VP + P CC+
Sbjct: 181 SNNVVPIHVPPTTENKP--KVQCCQ 203
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 161/220 (73%), Gaps = 11/220 (5%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
DP + DY+FKVVLIGDSAVGKS +L+R+ARNEF ++SKATIGVEFQT+++ K +KA
Sbjct: 4 DPGE--DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKA 61
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDISRR +F+ + RWL+EL+ H+D NIV +L+
Sbjct: 62 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLV 121
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE R VP E++K A+ E LFF+ETSAL ATNV +AF V+ E++N +++K L
Sbjct: 122 GNKCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALN 181
Query: 189 AGEGQGNGNPASLSGKKI---LVPG--PAQEIPAKSSMCC 223
+ + P LS + LVP A + K CC
Sbjct: 182 SDSYK----PKLLSNRSTKVSLVPNGDAATKTGLKKYACC 217
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 161/215 (74%), Gaps = 3/215 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G +++ DY+FKVVLIGDS VGKS +L+RF RNEF+++SK+TIGVEF T+++ ++K +K
Sbjct: 56 GAKDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIK 115
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +F++ RWL+ELR HA+ NIV++L
Sbjct: 116 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVML 175
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK DL R V E+AKEFA+K L F+ETSAL+++ V+ AF +LTEI+ ++NKK +
Sbjct: 176 VGNKCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQM 235
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+ G GN + G++I + + S C
Sbjct: 236 S---GNGNNSLNIGQGERIALNSGGDKASGDGSAC 267
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T+T ++ K VKAQ
Sbjct: 6 ADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+L+YD++R +F++ RWL ELR H D NIV++LIG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK DL AV TE+AK FA++E L+F+ETSAL+ATNVE+AF VL++I IV+K+++
Sbjct: 126 NKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRSV-- 183
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G+ L GK + K CC
Sbjct: 184 ---DGGGDSTELPGKGETINVKEDGSVLKRMGCC 214
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 152/180 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K+VK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++AK +A++ L F+ETSAL++TNVE AF +LTEI+ V+ + +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTRQV 181
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++ + + N
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS--DRRENDMSP 178
Query: 200 SLSGKKILVPGPAQEIPAKSSMCCR 224
S + I VP + P CC+
Sbjct: 179 SNNVVPIHVPPTTENKP--KMQCCQ 201
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 145/167 (86%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 6 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 65
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 66 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 125
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ I
Sbjct: 126 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 160/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEFSL SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA+LVYDISRR +FD++ RWL+EL +H+D + +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VP E+ K A+ EGLFF+ETSAL+ATNV AF V+ EI++ V++K L +
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKILNS----- 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM--CC 223
+ A LS ++ + G +++ ++S CC
Sbjct: 186 DSYKAELSLNRVSIDGDSKDDKKQTSRFGCC 216
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++ + + N
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS--DRRENDMSP 233
Query: 200 SLSGKKILVPGPAQEIPAKSSMCCR 224
S + I VP + P CC+
Sbjct: 234 SNNVVPIHVPPTTENKP--KMQCCQ 256
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 156/215 (72%), Gaps = 1/215 (0%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPT++AK FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G N N S L P P ++ SS CC
Sbjct: 187 TSDG-ANANKPSGGPTISLTPAPQEKKSKSSSNCC 220
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 146/178 (82%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
+ K L DS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQ
Sbjct: 5 IRKPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 64
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 65 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 124
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G+ Q
Sbjct: 125 LRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSQA 182
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 157/209 (75%), Gaps = 3/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++ + K++KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+ +F+++ RWL+ELR HA+ NIV++LIGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R V E+A EFA+K L FLETSAL+A+ V++AF +LTEI+ ++++K + A G
Sbjct: 129 RHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANTATG 188
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P G+ I + + +S C
Sbjct: 189 ---PDLSRGETIALSSARDDASNRSKSSC 214
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 146/172 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAG ERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI L
Sbjct: 62 AQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXL 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 15 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 74
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 75 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 134
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K ++ + + N
Sbjct: 135 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS--DRRENDMSP 192
Query: 200 SLSGKKILVPGPAQEIPAKSSMCCR 224
S + I VP + P CC+
Sbjct: 193 SNNVVPIHVPPTTENKPKM--QCCQ 215
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 158/216 (73%), Gaps = 4/216 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDI++ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPT++AK FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL- 185
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
E + N S SG I L P P ++ +S CC
Sbjct: 186 --ENNADSNKQSTSGPTISLTPAPKEKNSKSNSNCC 219
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 151/177 (85%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+T+AYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
KSDL RAV TE+AK FA++ GL F+ETSAL++TNV+ AF +LTEI+ IV++K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI 181
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 151/177 (85%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+T+AYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
KSDL RAV TE+AK FA++ GL F+ETSAL++TNV+ AF +LTEI+ IV++K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI 181
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 151/187 (80%), Gaps = 2/187 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
+ +IDYVFKVV++GDSAVGK+Q+LARF R+EF+LDSK+TIGVEFQTRTL + K VKA
Sbjct: 25 EKEAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKA 84
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD-KNIVIIL 127
QIWDTAGQERYRAVTSAYYRGA+GAM+VYD++RR +F+H+ RW+EELR+HAD + V+ L
Sbjct: 85 QIWDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVAL 144
Query: 128 IGNKSDLEE-QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
IGNK+D+ +R V ++A A+++GLFF E SAL NVE AF+T+L E+F +V+++
Sbjct: 145 IGNKADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRA 204
Query: 187 LTAGEGQ 193
L E +
Sbjct: 205 LELDEAR 211
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 160/214 (74%), Gaps = 8/214 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF++ SKATIGVEFQT++L I K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDI+RR +FD + RWL+EL++H D + ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E RAV E+ K A+ +GLFF+ETSAL++TNV AF V+ EI+N V++K L +
Sbjct: 131 ENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVLNS----- 185
Query: 195 NGNPASLSGKKILV--PGPAQEIPAKSSM-CCRT 225
+ A LS ++ + G A +KS CC T
Sbjct: 186 DTYKAELSVDRVSLVNNGAATSKQSKSYFSCCST 219
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 149/181 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FKVVLIGDS VGKS +L+RF RNEF++DSK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV T++AK FA + L F+ETSAL+A+NVE AF +LTEI+ IV+ K L E G
Sbjct: 127 RHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPENEHGG 186
Query: 195 N 195
+
Sbjct: 187 S 187
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 151/211 (71%), Gaps = 6/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL+GDS VGKS +L+RF RNEF L+SK+TIGVEF TRT+ IQ+K +KAQIWDTA
Sbjct: 9 DYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++ + +F ++ +WL ELR HAD NIVI+L+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNKCDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R + A++FA E L F+ETSAL+ATNVE AF+ L+ ++N+V+K E
Sbjct: 129 AQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQAVNAEETS 188
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
N + IL+ KS CC T
Sbjct: 189 NK-----QNRSILISAAEDGFRPKSK-CCST 213
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 160/213 (75%), Gaps = 3/213 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ K +KAQIW
Sbjct: 17 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 76
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGA+GA+LVYD+S+ +F++I RWL+ELR HAD NI I+L+GNK
Sbjct: 77 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGNK 136
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DL+ RAV T+D + FA+ EGL ++ETSALEATNVE AF +L +I+ ++KK + +
Sbjct: 137 TDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALDD 196
Query: 192 GQGNGNPASL-SGKKILVPGPAQEIPAKSSMCC 223
G G + GK I V A + + CC
Sbjct: 197 GGAGGAGGGVKEGKTINV--AASDTSGEKKQCC 227
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 162/227 (71%), Gaps = 14/227 (6%)
Query: 8 GDPNQKIDYVFK--------VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 59
G + + DY+FK VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 2 GTRDDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 61
Query: 60 VIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHA 119
+ K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HA
Sbjct: 62 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA 121
Query: 120 DKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
D NIVI+L+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+
Sbjct: 122 DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIY 181
Query: 180 NIVNKKNLT--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
IV++K + A + GN I VP CC+
Sbjct: 182 RIVSQKQIADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 224
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 165/227 (72%), Gaps = 20/227 (8%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
Y D + DY+FKVVLIGDSAVGKS +L+R+ARNEF+L+SKATIGVEFQT+++ I K
Sbjct: 2 AYNDDKSE-DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKE 60
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
+KAQIWDTAGQER+RAVTSAYYRGAVGA++VYDISRR +F+++ RWL+ELR H+D ++V+
Sbjct: 61 IKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVV 120
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNK DL+ R V E+A AQ E + F+ETSA++ATNV NAF +V+ EI+ +V+KK
Sbjct: 121 MLVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKK 180
Query: 186 NLTAGEGQGNGNPASLSGKKILVPGPAQEI-------PAKSSMCCRT 225
L +S S K V G +Q + P K+ CC T
Sbjct: 181 PL----------ASSTSMKSNTVLGSSQRLAGIDDTQPKKN--CCST 215
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 155/208 (74%), Gaps = 1/208 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ K +KAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTA 76
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGA+GA+LVYD+++ +F++I RWL+ELR HAD NI I+L+GNK+DL
Sbjct: 77 GQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTDL 136
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAV T+DA +A+ EGL ++ETSALEA NVE AF +L +I+ ++KK + + E +
Sbjct: 137 KHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVASEEDRA 196
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMC 222
GK I V A + K C
Sbjct: 197 AAAGVK-EGKTINVAATASDGGEKKQCC 223
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 156/219 (71%), Gaps = 24/219 (10%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D +KIDYVFKVV+IGDSAVGK+QIL+RF++NE T+ I K +KA
Sbjct: 18 DMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIKA 61
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQSFDH+ +W+EELR+HAD +IVI+L+
Sbjct: 62 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLV 121
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DL + R VPTEDA EFA+ +GLFF ETSAL NVE AFM +L EI ++V+KK L
Sbjct: 122 GNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKALE 181
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQ----EIPAKSSMCC 223
G +G +L G KI V A+ EI SS C
Sbjct: 182 CGNVKG----IALKGSKIDVISGAELEISEIKKLSSCSC 216
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 164/214 (76%), Gaps = 4/214 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K VKAQIW
Sbjct: 6 EEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQIW 65
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA++VYDI++ +++++ RWL+EL+ HAD NIVI+L GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGNK 125
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DL RAV TE+AK+FA++ L F+ETSAL++TNVE AF +LTEI+NIV +K A
Sbjct: 126 CDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQK---APA 182
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSM-CCR 224
G G S+S K++ ++ + S M CC+
Sbjct: 183 DGGQGGGGSVSETKVIKIDDQKDEKSGSKMKCCQ 216
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 148/178 (83%), Gaps = 2/178 (1%)
Query: 14 IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDT 73
+ ++FKVVLIGDS GKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDT
Sbjct: 13 LTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 72
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDIS+ Q++D++ RWL+ELR HAD NIVI+L+GNKSD
Sbjct: 73 AGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSD 132
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--FNIVNKKNLTA 189
L RAVPTE+AK+FA + L F+ETSAL+A+NVE AF +LT I I +++LTA
Sbjct: 133 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGISKRRSLTA 190
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 168/216 (77%), Gaps = 8/216 (3%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+++ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++ + K++KAQ
Sbjct: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +F+++ RWL+ELR HA+ NIV++L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAV T++A F+++ L F+ETSAL+A+ V+ +F +LTEI+ +++++N+ A
Sbjct: 125 NKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRRNMAA 184
Query: 190 GEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCR 224
EG GN LS G+ I + + P ++ CC+
Sbjct: 185 EEG---GNQPQLSTGQTISLNNDNK--PRRN--CCQ 213
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 160/220 (72%), Gaps = 17/220 (7%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF++DSK+TIGVEF TR+L + K++KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS++ SF ++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEG-----------LFFLETSALEATNVENAFMTVLTEIFNIVN 183
+ RAVPT +A+ + +++ + F+ETSAL++TNVE AF +LT+I+ +V
Sbjct: 129 KHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLVA 188
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
K L G+ N G+ I V P + K + CC
Sbjct: 189 TKALEGGDSIKPTN-----GETINVQ-PTSDSDNKKAGCC 222
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/162 (69%), Positives = 141/162 (87%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D +FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 43 DLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWDTA 102
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI++ ++ ++ RWL+EL+ HAD NIVI+L+GNKSDL
Sbjct: 103 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKSDL 162
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
RAVPTE+AK+FA EGL F+ETSAL+A+NVENAF T+LT
Sbjct: 163 RHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILT 204
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 162/213 (76%), Gaps = 7/213 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++ + K++KAQI
Sbjct: 6 DEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +F+++ RWL+ELR HA+ NIV++L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV T++A F+++ L F+ETSAL+A+ V+ AF +LTEI+ +++++N+ A
Sbjct: 126 KSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMQAE 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E N N +G KI + K CC
Sbjct: 186 E---NANAPMSAGHKISLSQSGD----KKKGCC 211
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 154/214 (71%), Gaps = 9/214 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGKS +L+RF +NEFS DS+ TIGVEF TRT+ + ++KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LVYDIS+ +++ RWL+EL HAD +IV++L+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+VPTEDAK+FA+K GL F ETSALE+ NVE AF TVLTEI VN K +T G
Sbjct: 124 KSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEVTRG 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
S+S + P E + CC+
Sbjct: 184 ---------SISAVTLSQPKTPAETQEEKKTCCK 208
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 163/205 (79%), Gaps = 4/205 (1%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + +K+VKAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ ++++ RWL+EL+ HAD NIVI+L+GNKSDL RA
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPT++A+ FA+K GL FLETSAL++TNVE AF +L+EI+ IV+++ +T G+ + P+
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQIT-GQAESEFGPS 208
Query: 200 SLSGKKILVPGPAQEIPAKSSMCCR 224
S + + I V QE + + CC+
Sbjct: 209 S-TIEPIQVLPTQQE--GRQAPCCQ 230
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 166/214 (77%), Gaps = 6/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+++ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++ + K++KAQ
Sbjct: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +F+++ RWL+ELR HA+ NIV++L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAV T++A F+++ L F+ETSAL+A+ V+ AF +LTEI+ +++++N+ A
Sbjct: 125 NKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAA 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G P SG+ I + A+ P ++ CC
Sbjct: 185 EDGA--NAPQLSSGQTISL--NAENKPRRN--CC 212
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 143/165 (86%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI L+GNKSDL
Sbjct: 63 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKSDL 122
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+
Sbjct: 123 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 154/215 (71%), Gaps = 1/215 (0%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+VLIGDS+VGK+ +L+RF R+EF+ DS+ATIGVEF TRTL I K +KA
Sbjct: 7 DYSYDYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+T+AYYRGAVGA++VYDIS S++ + RWL+E++ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDLE RAVPTE+A+ FA + L F E SAL A NVE F ++ I+++V+K+
Sbjct: 127 GNKSDLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRKFD 186
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E G N S L P P + +K+S CC
Sbjct: 187 MDEN-GVANKDLNSKTITLTPAPKDKKVSKNSNCC 220
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 156/215 (72%), Gaps = 20/215 (9%)
Query: 10 PNQKIDYVFK------------VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTR 57
N + D++FK VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR
Sbjct: 2 ANDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATR 61
Query: 58 TLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRS 117
++ I K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI + SF+++ RWL+ELR
Sbjct: 62 SIQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRD 121
Query: 118 HADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTE 177
HAD NIVI+L+GNK+D RAV TED K FA + GL F+ETSALEATNV+ AF +LT
Sbjct: 122 HADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTS 181
Query: 178 IFNIVNKKNLTAGEGQ-------GNGNPASLSGKK 205
I+ IV+ K+L A EG GN SLS +K
Sbjct: 182 IYQIVSSKSL-AEEGDVSKKFDPSQGNNISLSQEK 215
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 160/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA+LVYDISRR +FD++ RWL+EL +H+D + +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VP E+ K A+ EGLFF+ETSAL++TNV AF V+ EI++ V++K L +
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNS----- 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM--CC 223
+ A LS ++ + G +++ +S+ CC
Sbjct: 186 DSYKAELSLNRVSIEGDSKDDQKQSNRFGCC 216
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 144/175 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L R+ARNEF+L SKATIGVEFQT+TL I K VKAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA++VYDI+RR +FD IPRWL+EL++H+D + +L+GNK DL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
+ RAV E+ K A+ EG+FF+ETSAL+ATNV AF V+ EI+N V++K L +
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNS 176
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 143/169 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
+GNKSDL RAVPT++AK FA+K L F+ETSAL++TNVE AF +LT
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 160/211 (75%), Gaps = 5/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
DY+FK+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI+++ SF++I +WL+ELR +AD NIVI+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L+ R + DA ++A+KE L F+ETSALEATNVE AF +L EI+N+ KK T +
Sbjct: 129 LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKNDDN 188
Query: 194 GNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
+ P GKKI V + K + CC
Sbjct: 189 LSIQP---RGKKINVDDDNDKNETKKKNKCC 216
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 149/185 (80%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G +++ DY+FKVVLIGDS VGKS +LARF RNEF+L+SK+TIGVEF TR++ + K +K
Sbjct: 2 GTGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ ++ ++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVP ++A FA+ L F+ETSAL++TNVE AF +LTEI V+ + +
Sbjct: 122 VGNKSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQM 181
Query: 188 TAGEG 192
+ +G
Sbjct: 182 DSMDG 186
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 154/206 (74%), Gaps = 4/206 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
V ++VLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQ
Sbjct: 19 VLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 78
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ERYRA+TSAYYRGAVGA+LVYD +++Q+F + RWL+ELR HADKNIVI+L+GNK D +
Sbjct: 79 ERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGNKIDEKH 138
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNG 196
R V T DA EFA + L F+ETSAL+ATNVE AF +LTEI+ IV+ K L G +
Sbjct: 139 MRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE--NGSSSQ 196
Query: 197 NPASLSGKKILVPGPAQEIPAKSSMC 222
NP L +K++ Q+ AK C
Sbjct: 197 NP--LGDRKVIEISKTQDADAKQKCC 220
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I
Sbjct: 2 GDNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDG 61
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
+ VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ +S++ + RWL+EL+ HAD NI
Sbjct: 62 RRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNI 121
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI L+GNKSDL+ RAVPTE+AK FA + L F E SAL + NV+ +F +L I+ +++
Sbjct: 122 VIELVGNKSDLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMIS 181
Query: 184 KKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
K L + QG P SG I L P P ++ +S CC
Sbjct: 182 KHQLDTND-QGAQKP---SGPTISLTPAPQEKKGKNNSNCC 218
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 146/186 (78%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + DY+FK+VL+GDS VGKS +L+RF RNEF L+SK+TIGVEF TRT+ +Q+K +K
Sbjct: 3 GETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKIIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++ ++D+I +WL ELR HAD +IVI+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVIML 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK DLE R A++FA+KEGL F+ETSAL ATNVE+AF+ L ++++V+K +
Sbjct: 123 VGNKCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSKLKM 182
Query: 188 TAGEGQ 193
Q
Sbjct: 183 ACTPSQ 188
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 159/215 (73%), Gaps = 20/215 (9%)
Query: 19 KVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQER 78
KVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 79 YRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQR 138
YRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL R
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 139 AVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT--AGEGQGNG 196
AVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K + A + G
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPG 180
Query: 197 N-------PASLSGKKILVPGPAQEIPAKSSMCCR 224
N P + G+K P Q CC+
Sbjct: 181 NNVVDISVPPTTDGQK---PNKLQ--------CCQ 204
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 157/213 (73%), Gaps = 6/213 (2%)
Query: 14 IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDT 73
I + K VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDT
Sbjct: 8 ISLICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD 127
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT--AGE 191
L RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K + +
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAH 187
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ GN I VP + CC+
Sbjct: 188 DESPGNNVV----DISVPPTTDGQKSNKLQCCQ 216
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 152/213 (71%), Gaps = 4/213 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I+ K +KAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE++K FAQ+ L F ETSAL + NV+ AF ++ I+ V+K + G+
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 195 NGNPASLS---GKKI-LVPGPAQEIPAKSSMCC 223
NGN S G I L P P + A + CC
Sbjct: 191 NGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 158/214 (73%), Gaps = 12/214 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FKVV+IGDS VGK+ IL RF R+EF+LDSK+TIGVEF TRT+ I +K +KAQIWDTA
Sbjct: 6 DFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIWDTA 65
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+L+YD++ QS+ +I RWL+EL+ HAD NIV++L+GNK DL
Sbjct: 66 GQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNKCDL 125
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN-----KKNLTA 189
+ RAVPTE+AK+FA + L F+ETSAL+ T+V AF +LTEI++ V+ NL
Sbjct: 126 KHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAENVHANLED 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G SL+ + PG + + KSS CC
Sbjct: 186 SRKPQQGTTISLTPQ----PGDSDK---KSSSCC 212
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 157/215 (73%), Gaps = 1/215 (0%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDI++ ++++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPTE+A+ FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G G+ P + L P P ++ +S CC
Sbjct: 187 TNDG-GSNKPTTGGPTISLTPAPQEKRSKNNSNCC 220
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/182 (62%), Positives = 150/182 (82%), Gaps = 1/182 (0%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
+IDYVFKVV++GDSAVGK+Q+L RF ++EF LDSK+TIGVEFQTRTL + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGA+GAM+VYDI+RR++F+++ RW+EELR+HAD + V+ LIGNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 133 DLEE-QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
D+ +R V ++A FA+++GLFF E SAL NV+ AF+T+L EIF +V+++ L E
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 192 GQ 193
+
Sbjct: 198 AR 199
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 159/210 (75%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H+D + ++L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V E+AK A+ EGLFF+ETSAL++TNV+ AF V+ EI+N V++K L +
Sbjct: 130 ENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNS----- 184
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+ A LS ++ LV A+S C
Sbjct: 185 DTYKAELSLNRVTLVNNGNDSKQAQSYFSC 214
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 13/215 (6%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
DY+FK+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI+++ SF++I +WL+ELR +AD NIVI+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L+ R + +A +FA+KE L F+ETSALEATNVE AF +L EI+N+ KK Q
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK-------Q 181
Query: 194 GNGNPASLS----GKKILVPGPAQEIPA-KSSMCC 223
G N S+S GKKI V E + K S CC
Sbjct: 182 GTKNEDSMSIQPRGKKINVDDDNDENNSKKKSKCC 216
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 163/214 (76%), Gaps = 11/214 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N+ ++VFKVVLIG+S VGKS +L+RFA+NEF+ DS+ TIGVEF TRT+ + ++KAQI
Sbjct: 8 NEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKAQI 67
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LVYD+++ +++ + RWL+EL HAD ++V++L+GN
Sbjct: 68 WDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLVGN 127
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL +R+VPTE+AK+FA+K+GL FLETSALE+TNVE AF VL+EI V+ K +
Sbjct: 128 KSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKVI-- 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
QG+ + SL+G VP P ++ CC+
Sbjct: 186 --QGSISAVSLAGH---VPSN----PEENKPCCK 210
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 145/175 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF++ SKATIGVEFQT+ L I K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H D + ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E RAV ++ K A+ EGLFF+ETSAL++TNV+ AF V+ EI+N V++K L +
Sbjct: 131 ENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVLNS 185
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 156/210 (74%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+VLIGDSAVGKS +L+RFARNEF +SKATIGVEFQT+T+ I K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA++VYDISRR +FD I RWL+EL + D + +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V TE+ K FA++EGLFF+ETSAL++TNV+ AF V+ EI+N +++K L +
Sbjct: 130 ESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNS----- 184
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+ A LS ++ LV G + + CC
Sbjct: 185 DSYKAELSVNRVSLVNGAGSKKNLLNFSCC 214
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 151/213 (70%), Gaps = 4/213 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I K +KAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE++K FAQ+ L F ETSAL + NV+ AF ++ I+ V+K + G+
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 195 NGNPASLS---GKKI-LVPGPAQEIPAKSSMCC 223
NGN S G I L P P + A + CC
Sbjct: 191 NGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 158/214 (73%), Gaps = 9/214 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H+D + +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V E+ K A+ EGLFF+ETSAL++TNV+ AF V+ EI+N V++K L +
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNS----- 184
Query: 195 NGNPASLSGKKILV----PGPAQEIPAKSSMCCR 224
+ A LS ++ + G Q SS C R
Sbjct: 185 DTYKAELSLNRVTLVNNSDGSKQSQSYFSSCCSR 218
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 146/175 (83%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H+D + ++L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E R V E+ K A+ EGLFF+ETSAL++TNV+ AF V+ EI+N V++K L +
Sbjct: 130 ENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNS 184
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FKVVLIGDSAVGKS +L+R+ARNEF+ +SKATIGVEFQT+++ I K VKAQIW
Sbjct: 7 QSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RAVTSAYYRGAVGA++V+DI+RR +F+++ RWL+EL+ H+D ++V++L+GNK
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVMLVGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDL R V E+A A+ + F+ETSALE+ NV AF TVL EI IV+KK LTA
Sbjct: 127 SDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKALTADP 186
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N A SG+++ G P ++ CC
Sbjct: 187 NKSNTVVA--SGQRL--AGGDDTTP-RTGGCC 213
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 159/216 (73%), Gaps = 4/216 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+LDS++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPT++AK FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLE 186
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+ Q + P+ SG I L P P ++ ++ CC
Sbjct: 187 T-DDQPSAKPS--SGATISLTPVPQEKKSKNNANCC 219
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 158/212 (74%), Gaps = 7/212 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+ + I K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H+D + ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V ED A+ EGLFF+ETSAL++TNV+ AF V+ EI+N V++K L +
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNS----- 185
Query: 195 NGNPASLSGKKILV--PGPAQEIPAKSSMCCR 224
+ A LS ++ + G +++ S C R
Sbjct: 186 DTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 154/212 (72%), Gaps = 6/212 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+VLIGDSAVGKS +LARFARNEF +SKATIGVEFQT+ + I+ K +KAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDI+RR SFD + RWLEEL +H D +L+GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V E+ K A++E LFF+ETSAL++TNVE AF V+ EI++ +++K L +
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNS----- 186
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCCRT 225
+ A L+ ++ LV A S CC T
Sbjct: 187 DSYKAELTVNRVSLVKNNANSSKQSSFSCCAT 218
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 158/214 (73%), Gaps = 20/214 (9%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT--AGEGQGNGN 197
VPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K + A + GN
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 180
Query: 198 -------PASLSGKKILVPGPAQEIPAKSSMCCR 224
P + G+K P Q CC+
Sbjct: 181 NVVDISVPPTTDGQK---PNKLQ--------CCQ 203
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 150/213 (70%), Gaps = 4/213 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I K +KAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE++K FAQ+ L F ETSAL + NV+ AF ++ I+ V+K + G+
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 195 NGNPASLS---GKKI-LVPGPAQEIPAKSSMCC 223
NGN S G I L P P + A + CC
Sbjct: 191 NGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 156/211 (73%), Gaps = 6/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL--VIQHKSVKAQIWD 72
DY+FKVVLIGDS VGKS +L+RF RNEF +SK+TIGVEF TR + ++ K+VKAQIWD
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVKAQIWD 68
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRA+TSAYYRGAVGA+LVYDI++ +S+D++ +WL+ELR HAD NIVI L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITLVGNKT 128
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DL+ R+V E A EF+ EGL F+ETSA E+TNV+ AF LT++++I++KK+ ++ E
Sbjct: 129 DLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKSCSSAEV 188
Query: 193 QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A + I V ++ S CC
Sbjct: 189 DDKNGGAGI----IEVKAISESSKKNPSKCC 215
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 149/180 (82%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TRT+ + + ++KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LVYDI++ +++ + RWL+EL HAD +IV++LIGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDLE +R+VPTE+AK+FA+K+GL FLETSAL++TNVE AF TVL EI V+ K + G
Sbjct: 124 KSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVRG 183
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 153/195 (78%), Gaps = 9/195 (4%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 73
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT--AGEGQGNGN 197
VPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K + A + GN
Sbjct: 134 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 193
Query: 198 -------PASLSGKK 205
P + G+K
Sbjct: 194 NVVDISVPPTTDGQK 208
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 157/209 (75%), Gaps = 4/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++ K+VLIGDS VGK+ +L+RFAR++F+ DSK+TIGVEF T+TL I+ K+VKAQIWDTA
Sbjct: 7 DFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGA+GA+L+YDI+ +F+ + RWL+ELR +AD NIV++L+GNKSDL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSDL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+E RAV TED F+Q+E L F+ETSA ATNV+ AF T++TEI + ++K+N+ + +
Sbjct: 127 QELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVSPDSPA 186
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P K + + + K + CC
Sbjct: 187 KVGP----NKGVTITSTTADDKKKKNTCC 211
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 158/216 (73%), Gaps = 10/216 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ ++VFKVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TRT+ I + ++KAQI
Sbjct: 4 DDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LVYDIS+ +++ RWL+EL HAD +IV++L+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDLE R VPT++A++FA+K+GL F+ETSAL++TNVE AF VLT I V + +T G
Sbjct: 124 KSDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVTRG 183
Query: 191 EGQGNGNPASLSGKKILVP-GPAQEIPAKSSMCCRT 225
S+S + P GP+ E + CCR+
Sbjct: 184 ---------SISAVTLSSPIGPSSEAQEERKGCCRS 210
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 160/212 (75%), Gaps = 8/212 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEF+++SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 8 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H++ + +L+GNKSDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V E+ K A+ EGLFF+ETSAL++TNV+ AF V+ EI+N +++K L +
Sbjct: 128 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNS----- 182
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSM--CC 223
+ A LS ++ LV A +S CC
Sbjct: 183 DSYKAELSVNRVSLVSNGADGAKQANSRYSCC 214
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 165/248 (66%), Gaps = 36/248 (14%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKS-------------------------QILA 35
MA G + DY+FKVVLIGDS VGKS +L+
Sbjct: 1 MAEGSNF-------DYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLS 53
Query: 36 RFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAML 95
RF RNEF+L++K+TIGVEF TR++ + K++KAQIWDTAGQERYRA+T+AYYRGAVGA+L
Sbjct: 54 RFTRNEFNLETKSTIGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALL 113
Query: 96 VYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLF 155
VYDI++ ++ + RWL+ELR HAD NIVI+L+GNKSDL+ RAVPT++AK FA + GL
Sbjct: 114 VYDIAKHGTYVDVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLS 173
Query: 156 FLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEI 215
F+ETSAL+A+NVE+AF T+LT+I+ IV+ K+L Q + SG I V
Sbjct: 174 FIETSALDASNVESAFQTILTDIYRIVSSKSLE----QSSDPIKPSSGDSITVAPSVDSN 229
Query: 216 PAKSSMCC 223
++S CC
Sbjct: 230 TNQNSKCC 237
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 149/186 (80%), Gaps = 2/186 (1%)
Query: 6 GYGDPN--QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G GD + + +Y+FKVV+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+++ I
Sbjct: 2 GMGDDSDGEAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDG 61
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K VKAQIWDTAGQER+RAVTSAYYRGA GA+LVYDISRR +FD++ RWL+EL +H+D +
Sbjct: 62 KEVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTV 121
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
+L+GNK DL+ R VP E+ K A+ EGLFF+ETSAL++TNV AF V+ EI+N V+
Sbjct: 122 AKMLVGNKCDLDNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVS 181
Query: 184 KKNLTA 189
+K L +
Sbjct: 182 RKILNS 187
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 144/175 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF++ SKATIGVEFQT+ L I K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H D + ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E RAV ++ K A+ EGLFF+ETSAL++TNV+ AF V+ EI+ V++K L +
Sbjct: 131 ENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLNS 185
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 143/174 (82%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FKVV+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT++L I K VKAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H D + ++L+GNK DL+
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
R V E+ K A+ EGLFF+ETSAL++TNV+ AF V+ EI+N V++K L +
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNS 187
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 144/167 (86%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERYR
Sbjct: 19 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 78
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GNKSDL RAV
Sbjct: 79 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 138
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
PT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 139 PTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 185
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDTA 74
+ + VVLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDTA
Sbjct: 3 FFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTA 62
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI+++ +F++I +WL+ELR +AD NIVI+L+GNKSDL
Sbjct: 63 GQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDL 122
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R + DA +FA+KE L F+ETSALEATNVE AF +L EI+N+ KK T E
Sbjct: 123 KHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNV 182
Query: 195 NGNPASLSGKKILVPGPAQEIPAKS-SMCC 223
N P GKKI V E K+ + CC
Sbjct: 183 NIQP---RGKKINVDNDNDEDEKKTKTKCC 209
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 143/169 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LT
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDI++ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPTE+A+ FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAK-SSMCC 223
E QG AS L P P ++ +K +S CC
Sbjct: 187 TNE-QGGLKAASNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 148/193 (76%), Gaps = 3/193 (1%)
Query: 31 SQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGA 90
S +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERYRA+TSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 91 VGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQ 150
VGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RAVPTE+AK FA
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 151 KEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPG 210
+ L F+ETSAL+A+NVE AF +LTEI+ IV+ K L +G+ + +G I +
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD---SAQATIGAGTNISLSK 184
Query: 211 PAQEIPAKSSMCC 223
PA + AK CC
Sbjct: 185 PADDDAAKGGKCC 197
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 157/206 (76%), Gaps = 13/206 (6%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQ 69
++ DY++K+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ + K +KAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSF+++ RWL+ELR HAD NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL+ RAV E+A +FA +E L F+ETSAL+ATNVE AF +L EI+ + KK +
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQI-- 182
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEI 215
NP S + PG Q+I
Sbjct: 183 -----EDNPQSTTQ-----PGRGQKI 198
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYD ++ Q+F + RWL+ELR HADKNIVI+L+GNK D + RA
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG-EGQGNGNP 198
+ T+ EFA+ L F+ETSAL+ATNVE AF +LTEI+ IV+ K L G GQ NP
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALENGTSGQ---NP 187
Query: 199 ASLSGKKILVPGPAQEIPAKSSMC 222
L +K++ +Q+ AK C
Sbjct: 188 --LGDRKVVEITKSQDADAKQKCC 209
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 157/206 (76%), Gaps = 13/206 (6%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQ 69
++ DY++K+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ + K +KAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSF+++ RWL+ELR HAD NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL+ RAV E+A +FA +E L F+ETSAL+ATNVE AF +L EI+ + KK
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKK---- 180
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEI 215
Q NP S + PG Q+I
Sbjct: 181 ---QIEDNPQSTAQ-----PGRGQKI 198
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 145/179 (81%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
GG + K DY+FKVVL GDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++ I
Sbjct: 3 GGSISGEDDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDG 62
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
+++KAQIWDTAGQERYRA+T+AYYRGAVGA+LVYDI++R++F+++ WL ELR HA+ +I
Sbjct: 63 RTIKAQIWDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDI 122
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
VI+L+GNK DL R + TEDAK +A++ GLFF+ETSALE+T VENAF ++L IF V
Sbjct: 123 VIMLVGNKCDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIFEAV 181
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 153/210 (72%), Gaps = 1/210 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF L+SK+TIGVEF TRT+ + K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS++ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK+FAQ+ L F ETSAL + NV+ AF ++T I+ +++K + G
Sbjct: 131 SHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGVDNN 190
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
N + G I L P P ++ + S+ CC
Sbjct: 191 NNTLNAPKGPTISLTPAPNEKKKSSSNNCC 220
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 162/214 (75%), Gaps = 9/214 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY++K+VLIGDS VGKS +L+RF RNEFSL++K+TIGVEF TRT+ + K++KAQ+W
Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 67
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI+++ ++ + RW+ ELR +AD+NI I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNK 127
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDL R V T++AKEF++K L F+ETSAL+++NVE AF +LT+I++I+++ + + G
Sbjct: 128 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG- 186
Query: 192 GQGNGNPASL--SGKKILVPGPAQEIPAKSSMCC 223
P + S + ++ E PA S CC
Sbjct: 187 ------PQTTIDSNTETIILPTTSEPPAAKSGCC 214
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 157/213 (73%), Gaps = 20/213 (9%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT--AGEGQGNGN- 197
PT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K + A + GN
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN 180
Query: 198 ------PASLSGKKILVPGPAQEIPAKSSMCCR 224
P + G+K P Q CC+
Sbjct: 181 VVDISVPPTTDGQK---PSKLQ--------CCQ 202
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 157/200 (78%), Gaps = 12/200 (6%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
DY+FK+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI+++ SF++I +WL+ELR +AD NIVI+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L+ R + +A +FA+KE L F+ETSALEATNVE AF +L EI+N+ KK Q
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK-------Q 181
Query: 194 GNGNPASLS----GKKILVP 209
G N S+S GKKI V
Sbjct: 182 GTKNEDSMSIQPRGKKINVT 201
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 152/209 (72%), Gaps = 1/209 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF NEF+++SK+TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD+N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK FAQ+ L F ETSAL + NV+ AF ++T I+ +V+K + E
Sbjct: 131 AHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNEYGN 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N A L P PA++ KS CC
Sbjct: 191 NAGQAPKGPTISLTPAPAKK-NKKSDNCC 218
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 149/181 (82%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+V+IGDSAVGKS +L+R+ARNEFS +SKATIGVEFQT+++ I+ K VKA
Sbjct: 47 DDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKA 106
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDI+RR +F+ + RWL+EL+ H+D + +L+
Sbjct: 107 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLV 166
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE RAV E+ K A++EGLFF+ETSAL++TNV+ AF V+ +I+N V++K L
Sbjct: 167 GNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLN 226
Query: 189 A 189
+
Sbjct: 227 S 227
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 160/217 (73%), Gaps = 4/217 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDI++ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPTE+A+ FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAK-SSMCC 223
E G P+ +G I L P P ++ +K +S CC
Sbjct: 187 TNEQGGLKAPS--NGPTISLTPAPKEKKSSKNNSNCC 221
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 161/224 (71%), Gaps = 6/224 (2%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M++ YG DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+
Sbjct: 1 MSNNEDYG---YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIE 57
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
++ K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD
Sbjct: 58 VEGKKVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENAD 117
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+N+ + LIGNKSDL RAVPT++AK +AQ+ + F ETSAL A NV+ AF ++T I+
Sbjct: 118 ENVAVGLIGNKSDLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQ 177
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+V+K + E G+G G I L P P+++ K++ CC
Sbjct: 178 MVSKNQVDLSENNGSGTVP--RGPTISLAPAPSEKSKKKTNNCC 219
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 154/214 (71%), Gaps = 9/214 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF L SKATIGVEFQT+ + I K VKAQIWDTA
Sbjct: 7 EYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA+LVYDISRR +F+ I RWL+EL+ H D + +L+GNK DL
Sbjct: 67 GQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGNKCDL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V TE+ K A+ EGLFF+ETSAL+ATNV+ AF V+ EIFN V++K L
Sbjct: 127 ENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVL-----HS 181
Query: 195 NGNPASLSGKKILV----PGPAQEIPAKSSMCCR 224
+ A LS ++ + +++ SS C R
Sbjct: 182 DSYKAELSVNRVSLVNNGAAASKQNQIYSSCCSR 215
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 152/213 (71%), Gaps = 4/213 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I K +KAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE++K FAQ+ L F ETSAL + NV+ AF ++ I+ V+K + G+
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMDLGDSST 190
Query: 195 NGN---PASLSGKKI-LVPGPAQEIPAKSSMCC 223
NGN ++ +G I L P P + + CC
Sbjct: 191 NGNVNGASAPNGPTISLTPTPNENKNGSGNNCC 223
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 158/219 (72%), Gaps = 22/219 (10%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++K+QIWDTAGQERY
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 78
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYD+S+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 79 RAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 138
Query: 140 VPTEDAKEFA---------QKEGLFFLETSALEATNVENAFMTVLT----EIFNIVNKKN 186
VPTE+AK+FA + L F+ETSAL+A+NVE AF +LT EIF IV+ K
Sbjct: 139 VPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKA 198
Query: 187 LTAGEGQGNGNPASLSGKKI--LVPGPAQEIPAKSSMCC 223
L +G+ N L +K+ + P E K CC
Sbjct: 199 LESGDSSAN----QLGDRKVVEITKTPDSE---KKQGCC 230
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 159/211 (75%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEF+ SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA+LVYDI+RR +FD++ RWL+EL +H+D + +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VP E+ K A+ EGLFF+ETSAL+ATNV AF V+ EI++ V++K L +
Sbjct: 131 GDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVLNS----- 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM--CC 223
+ A LS ++ + G +++ + S CC
Sbjct: 186 DSYKAELSLNRVSIDGDSKDEQKQGSRFGCC 216
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 143/169 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
+GNKSDL R+VPT++AK FA++ GL F+ETSAL++TNVE AF +LT
Sbjct: 122 VGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 143/169 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 130 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 189
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 190 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 249
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LT
Sbjct: 250 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 298
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/157 (70%), Positives = 134/157 (85%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 12 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL ELR H D NIV++LIGNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVMLIGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAF 171
AV T+D K FA++E L+F+ETSALEATNVENAF
Sbjct: 132 RHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 154/210 (73%), Gaps = 2/210 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF NEF+++SK+TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ ++++ WL+ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT +AK FA + L F ETSAL + NV+ AF ++T I+ +V+K + G+ G
Sbjct: 131 AHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGD-SG 189
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
N A+ G I L P P + + SS CC
Sbjct: 190 NNAAAAPKGPTISLTPTPNENKKSSSSNCC 219
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 152/209 (72%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FK+VLIGDS VGKS +L+RF NEF+LDSK TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYR AVGA++VYDI++ S+++ WL EL+ +AD+N+ + LIGNKSDL
Sbjct: 71 GQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ +RAVPT++A+ +AQ+ L F ETSAL A NV+ AF ++T I+ +++K L + G
Sbjct: 131 DHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLDLNDASG 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N A L P P ++ ++ CC
Sbjct: 191 NNANAPKGPTISLTPAPNEKHKKSTNNCC 219
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 150/209 (71%), Gaps = 9/209 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL GDS VGKS +L+RF RN+FS DS+ATIGVEF TR++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQE SAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 124
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RA+ TE+AK FA++E FF+ETSALEA NV+NAF VLT+I+ +V+KK L AG+
Sbjct: 125 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P G+ I V G K CC
Sbjct: 185 TALP---KGQMINVGGRDDISAVKKPGCC 210
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 161/215 (74%), Gaps = 13/215 (6%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
DY+FK+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI+++ SF++I +WL+ELR +AD NIVI+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L+ R + +A +FA+KE L F+ETSALEATNVE AF +L EI+N+ KK Q
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK-------Q 181
Query: 194 GNGNPASLS----GKKILV-PGPAQEIPAKSSMCC 223
G N S+S GKKI V K S CC
Sbjct: 182 GTKNEDSMSIQPRGKKINVDDDNDDNDSKKKSKCC 216
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 144/167 (86%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERYR
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GNKSDL R+V
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 208
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
PT++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 209 PTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 255
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 59
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 53
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 143/166 (86%)
Query: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 81
LIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 82 VTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVP 141
+TSAYYRGAVGA+LVYDI++ +++++ RWL ELR HAD+NIVI+L+GNKSDL RAVP
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 142 TEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
T++AK FA++ GL F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 169
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 160/220 (72%), Gaps = 8/220 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILL 121
Query: 128 IGNKSDLEEQRAV-PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
+GNKSDL RAV P +A+ FA++ L F+ETSAL++TNVE AF +LTEI+ IV++K
Sbjct: 122 VGNKSDLRHLRAVCPLTEARAFAERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ 180
Query: 187 LT--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ A + GN I VP CC+
Sbjct: 181 IADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 156/212 (73%), Gaps = 3/212 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ +++K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT-AGEGQ 193
RAVPT++AK FA + + F ETSAL + NV+ AF ++ IF +V+K + +G G
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 194 GN-GNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
N G+ + G I L P P ++ KSS CC
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ DY++K+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T++++ + K +KAQI
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+R SF+++ RWL+ELR HAD NIV++L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R V E+A F+++EG+ +E SAL ++NV+ AF +L+EI+ + +++ LTA
Sbjct: 125 KSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTAN 184
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM---CC 223
+ N L + + V ++ +K S CC
Sbjct: 185 QHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 149/181 (82%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+V+IGDSAVGKS +L+R+ARNEFS +SKATIGVEFQT+++ I+ K VKA
Sbjct: 4 DDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKA 63
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDI+RR +F+ + RWL+EL+ H+D + +L+
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLV 123
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE RAV E+ K A++EGLFF+ETSAL++TNV+ AF V+ +I+N V++K L
Sbjct: 124 GNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLN 183
Query: 189 A 189
+
Sbjct: 184 S 184
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 152/213 (71%), Gaps = 4/213 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I K +KAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE++K FAQ+ L F ETSAL + NV+ AF ++ I+ V+K + G+
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSST 190
Query: 195 NGN---PASLSGKKI-LVPGPAQEIPAKSSMCC 223
NGN ++ +G I L P P + + CC
Sbjct: 191 NGNVNGASAPNGPTISLTPTPNENKNGGGNNCC 223
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 156/218 (71%), Gaps = 7/218 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS IL+RF R EF+L+S++TIGVEF T+++ I K VKAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIWDTA 75
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+R SFD+ RWL+ELR HAD +IV++L+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNKCDL 135
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI-VNKKNLTAGEGQ 193
RA+ E+A++F L F+ETSALEATNVE AF +L +I+ + +K + G
Sbjct: 136 SHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQAAGA 195
Query: 194 GNGNPASLSGK---KILVPGP---AQEIPAKSSMCCRT 225
G+P+ + + ++ + G A + S CC T
Sbjct: 196 AAGDPSMVEQQERMRVQLEGATTGALQQQHHHSKCCST 233
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 147/175 (84%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEF+++SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 95 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 154
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +FD + RWL+EL++H++ + +L+GNKSDL
Sbjct: 155 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 214
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E R V E+ K A+ EGLFF+ETSAL++TNV+ AF V+ EI+N +++K L +
Sbjct: 215 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNS 269
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 154/213 (72%), Gaps = 5/213 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ +++K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++A+ FA + + F ETSAL + NV+ AF ++ IF +V+K + G G
Sbjct: 131 AHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLN-GSG 189
Query: 195 NGNPASLSGKK----ILVPGPAQEIPAKSSMCC 223
+ N S G K L P P ++ KSS CC
Sbjct: 190 SNNVGSNGGPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 160/224 (71%), Gaps = 14/224 (6%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MA G G+ +Y+FK+VLIGDSAVGKS +L+RFARNEF +SKATIGVEFQT+ +
Sbjct: 1 MAENGEGGE-----EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVE 55
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I K +KAQIWDTAGQER+RAVTSAYYRGAVGA++VYDISRR +FD I RWL+EL + D
Sbjct: 56 IDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQND 115
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+ +L+GNK DLE R V TE+ K A++EGLFF+ETSAL+ATNV+ AF V+ EI+N
Sbjct: 116 STVARMLVGNKCDLENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYN 175
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+++K L + + A LS ++ LV G + + CC
Sbjct: 176 NISRKVLNS-----DSYKAELSVNRVSLVNGAGSK---QGPSCC 211
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 148/181 (81%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+V+IGDSAVGKS +L+R+ARNEFS +SKATIGVEFQT+++ I+ K VKA
Sbjct: 4 DDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKA 63
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDI+RR +F+ + RWL+EL+ H+D + +L+
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLV 123
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE RAV ++ K A+ EGLFF+ETSAL++TNV+ AF V+ +I+N V++K L
Sbjct: 124 GNKCDLENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLN 183
Query: 189 A 189
+
Sbjct: 184 S 184
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 154/210 (73%), Gaps = 3/210 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF N+F+++SK+TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAVPT++AK FAQ+ L F ETSAL++ NV+ AF ++T I+ +V+K + G+
Sbjct: 131 DHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGDANT 190
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
GN G I L P P + ++ CC
Sbjct: 191 QGNAP--KGPTISLTPAPNENKKKSANNCC 218
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 143/175 (81%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEF+ SKATIGVEFQT+T+ I K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA+LVYD+SRR +FD++ RWL+EL +H+D + +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E R VP E+ K A+ EGLFF+ETSAL++TNV AF V+ EI++ V++K L +
Sbjct: 131 ENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNS 185
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 153/219 (69%), Gaps = 13/219 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL+GDS VGKS +L+RF RN FSLDSK+TIGVEF TRT+ + K++KAQIWDTA
Sbjct: 17 DYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 76
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD-KNIVIILIGNKSD 133
GQERYRA+TSAYYRGA GA+LVYD++R +F+ RWL ELR HAD + ++L+GNK+D
Sbjct: 77 GQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTD 136
Query: 134 L---------EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
L RAVP DA A++EGL F+ETSAL+ATNV+ AF T+LTEI+ V++
Sbjct: 137 LARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSR 196
Query: 185 KNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
K L A G+ A G+ + A + ++ CC
Sbjct: 197 KALAASSA---GDDAGAVGEGQAIQVSASDSAGLTTRCC 232
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 156/212 (73%), Gaps = 3/212 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ +++K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT-AGEGQ 193
RAVPT++AK FA + + F +TSAL + NV+ AF ++ IF +V+K + +G G
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 194 GN-GNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
N G+ + G I L P P ++ KSS CC
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 154/210 (73%), Gaps = 4/210 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+VLIGDS VGKS +L+RF RNEF+L+S++TIGVEF TRT+ I K VKAQIWDTA
Sbjct: 12 EYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+ +S++++ +WL+EL+ +AD+NIVI L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAVPT++AK+F+ + L F E SAL A NV+ +F +L I ++V+K + G
Sbjct: 132 DHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDMTDYSG 191
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
P G I L P P E S CC
Sbjct: 192 ---PKPSGGPTISLTPTPGNEQSKNKSNCC 218
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 155/218 (71%), Gaps = 25/218 (11%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P QKIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF DSK+TIGVEFQTRT+ I K +KAQ
Sbjct: 33 PLQKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQ 92
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRAVTSAYYRGA+GAMLVYDI++RQ+FDH+ RW+EELRSHAD +IVI+LIG
Sbjct: 93 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIMLIG 152
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK DL +QR V T+ + G FFL +I +V+K++L +
Sbjct: 153 NKGDLVDQRVVHTDKCCGVCRGSGPFFLRD----------------FKINKVVSKRSLES 196
Query: 190 GEGQGNGNPASLSGKKI-LVPGP------AQEIPAKSS 220
G+ N A+L G KI ++ GP +E+P+ S
Sbjct: 197 NNGK--NNIATLKGSKIDIISGPELDITEMKEVPSCSC 232
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DYVFK+V++GDSAVGK+Q+L RF R+EF LDSK+TIG+EFQTRT+ I VKAQIWDTA
Sbjct: 4 DYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRAVTSAYYRGA+GAMLVYD++ R++FDH RW+ ELR+HADK+IV++L+GNK+DL
Sbjct: 64 GQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKADL 123
Query: 135 EE---QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAG 190
+RAV ++A FA+++GLFF E SAL NVE AF+T+L EI IV++K L A
Sbjct: 124 ARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDAAA 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
E G + +L G K+ A EI + RT
Sbjct: 184 ETGGTTDVLALKGTKL---SLADEISIMETSALRT 215
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 144/175 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA+LVYDISRR +FD++ RWL+EL +H+D + +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
+ R VP E+ K A+ EGLFF+ETSAL++TNV AF V+ EI++ V++K L +
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNS 185
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 159/219 (72%), Gaps = 11/219 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DYVFKVV+IGDS VGK+Q+L RF R +F LDSK+TIG+EFQTRT+ I + VKAQIWDTA
Sbjct: 5 DYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIWDTA 64
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRAVTSAYYRGA+GAMLVYD++RR SF H RW+ ELR+HADK+IV+ L+GNK+DL
Sbjct: 65 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNKADL 124
Query: 135 EE----QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
+R V ++A+ FA+++GLFF E SAL NVE AF+ +L EI V++K L A
Sbjct: 125 ATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPLEAA 184
Query: 191 EGQGNGNP-------ASLSGKKILVPGPAQEIPAKSSMC 222
G G+G+ SLS + ++ A + P++ S C
Sbjct: 185 RGNGDGDDDVLVLKGISLSQELSMMETSAMKTPSRCSSC 223
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/183 (63%), Positives = 152/183 (83%), Gaps = 4/183 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD+++ +F+ + WL+ELR HAD NIVI+LIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIMLIGN 123
Query: 131 KSDLEEQRAVPTEDAKEFA-QKEGLFFLETSALEATNVENAFMTVLTEIFN-IVNKKNLT 188
K+DL+ RAV TEDA+ F +K+ L F+ETSAL+ATNVE AF T+L F I++KK+L+
Sbjct: 124 KTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISKKSLS 183
Query: 189 AGE 191
+ E
Sbjct: 184 SDE 186
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 157/211 (74%), Gaps = 12/211 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ Q
Sbjct: 130 SQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR------QN 183
Query: 195 NGNPASLSGKKILVPGPA-QEI-PAKSSMCC 223
N ++ IL GPA QE+ P + CC
Sbjct: 184 NARTNAV----ILGSGPAGQELGPGEKRACC 210
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 149/181 (82%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+V+IGDSAVGKS +L+R+ARNEFS +SKATIGVEFQT+++ I+ K VKA
Sbjct: 4 DDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKA 63
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDI+RR +F+ + RWL++L+ H+D + +L+
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLV 123
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE RAV E+ K A++EGLFF+ETSAL++TNV+ AF V+ +I+N V++K L
Sbjct: 124 GNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLN 183
Query: 189 A 189
+
Sbjct: 184 S 184
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 139/160 (86%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K+VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL+ RA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
VPTE+AK F+ + L F+ETSAL+A+NVE+AF T+LT+++
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVY 160
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 139/160 (86%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K+VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ ++ ++ RWL+ELR HAD NIVI+L+GNKSDL+ RA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
VPTE+AK F+ + L F+ETSAL+A+NVE+AF T+LT+++
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVY 160
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 156/209 (74%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+N +
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQNQNSPRSNA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ +G++ PGP Q+ CC
Sbjct: 190 IALGSAQAGQE---PGPGQK-----RACC 210
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 156/215 (72%), Gaps = 10/215 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TRT+ ++ +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LVYDI++ +++ + RWL+EL HAD +IV++L+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL +R+VP E+AK+FA+K GL FLETSALE+TNVE AF VL EI V+ K + G
Sbjct: 124 KTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKVLRG 183
Query: 191 EGQGNGNPASLSGKKILVPGP-AQEIPAKSSMCCR 224
S+S + P P A P + CCR
Sbjct: 184 ---------SISAVSLASPVPRAAGDPEEKKPCCR 209
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 143/168 (85%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
VPT++A+ FA+K L F+ETSAL++T VE AF +LTEI+ IV++K +
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQI 168
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 144/175 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FKVV+IGDSAVGKS +L+R+ARNEF+L SKATIGVEFQT+++ I K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA+LVYDISRR +FD++ RWL+EL +H+D + +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
+ R VP E+ K A+ EGLFF+ETSAL++TNV AF V+ EI++ V++K L +
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNS 185
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 157/221 (71%), Gaps = 5/221 (2%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G D + +Y++K+VLIGD VGKS +L+RF R+EF+L+S++TIGVEF TRTL I
Sbjct: 2 GDNTDDYSYDYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDG 61
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
+ VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI + +S++ + RWL+EL+ HAD NI
Sbjct: 62 RRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNI 121
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI L+GNKSDL+ RAVPTE+AK FA + L F E SAL + NV+ +F +L I+ +++
Sbjct: 122 VIELVGNKSDLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMIS 181
Query: 184 KKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
K L + QG P SG I L P P ++ +S CC
Sbjct: 182 KHQLDTND-QGAQKP---SGPTISLTPAPQEKKGKNNSNCC 218
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 151/209 (72%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF NEF+++SK+TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ ++++ WL EL+ +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK FA + L F ETSAL + NV+ AF ++T I+ +V+K + G+
Sbjct: 131 AHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSNT 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G A L P P + + S+ CC
Sbjct: 191 SGATAPKGPTISLTPAPNENKKSSSNNCC 219
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 155/212 (73%), Gaps = 3/212 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ +++K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT-AGEGQ 193
RAVPT++AK FA + + F TSAL + NV+ AF ++ IF +V+K + +G G
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 194 GN-GNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
N G+ + G I L P P ++ KSS CC
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 142/180 (78%), Gaps = 4/180 (2%)
Query: 7 YGDP----NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 62
YG P + DY+FKVVLIGDS VGKS +L+RF R+ F L+SK+TIGVEF TR + I
Sbjct: 2 YGSPMSGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNID 61
Query: 63 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKN 122
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ + QSF ++ WL ELR HA+KN
Sbjct: 62 GKVIKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKN 121
Query: 123 IVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
IV++L+GNK DL R V TEDA+ FAQ++GL F+ETSAL++TNVE AF +L +I+NIV
Sbjct: 122 IVMMLVGNKCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIV 181
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 157/211 (74%), Gaps = 12/211 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ Q
Sbjct: 130 SQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR------QN 183
Query: 195 NGNPASLSGKKILVPGPA-QEI-PAKSSMCC 223
N +++ L GPA QE+ P + CC
Sbjct: 184 NARTNAVT----LGSGPAGQELGPGEKRACC 210
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 147/181 (81%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+V+IGDSAVGKS +L R+ARNEF+ +SKATIGVEFQT+++VI K VKA
Sbjct: 3 DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDI+R +F+++ RWL+EL +H+D + +LI
Sbjct: 63 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE RAV E+ K A+ EGLFF+ETSAL++TNV+ AF V+ EI++ +++K L
Sbjct: 123 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 182
Query: 189 A 189
+
Sbjct: 183 S 183
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
DY+FK+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDT
Sbjct: 5 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 64
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI+++ SF++I +WL+ELR +AD NIVI+L+GNKSD
Sbjct: 65 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 124
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
L+ R + DA ++A+KE L F+ETSALEATNVE AF +L EI+N+ KK T
Sbjct: 125 LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQAT 179
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 155/216 (71%), Gaps = 4/216 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDI++ +S++ + RWL+EL+ HAD NI+I L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPTE+AK FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL- 185
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
E + + G I L P P ++ + CC
Sbjct: 186 --ENNDSKQTNTAGGPTISLTPAPQEKKNKNNGGCC 219
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 152/219 (69%), Gaps = 4/219 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I K +KA
Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKA 64
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLI 124
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL RAVPTE++K FA + L F ETSAL + NV+ AF ++ I+ V+K +
Sbjct: 125 GNKSDLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMD 184
Query: 189 AGEGQGNGNP---ASLSGKKI-LVPGPAQEIPAKSSMCC 223
G+ NGN ++L+G I L P + + CC
Sbjct: 185 LGDSAANGNANGMSALNGPTISLTPTANENKKGNGNNCC 223
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 147/180 (81%), Gaps = 6/180 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY++K+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T++++ Q K +KAQIWDTA
Sbjct: 9 DYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+R SF+++ RWL+ELR HAD NIV++L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF------NIVNKKNLT 188
+ RAV E+A F++KEG+ +E SAL ++NVE AF +L+EI+ I N+ +LT
Sbjct: 129 KHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIANQHDLT 188
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 144/175 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+ SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +F+ + RWL+EL++H+D + +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E RAV E+ K A+ EGLFF+ETSAL++TNV+ AF V+ +I+ V++K L +
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQLNS 184
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/158 (68%), Positives = 138/158 (87%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTE 177
VPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTE
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 164
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 144/175 (82%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+ SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +F+ + RWL+EL++H+D + +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E RAV E+ K A+ EGLFF+ETSAL++TNV+ AF V+ +I+ +++K L +
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNS 184
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 160/217 (73%), Gaps = 4/217 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI++ +S++ + RWL+EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPT++A+ FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSS-MCC 223
E QG G A+ +G I L P P + K++ CC
Sbjct: 187 TNE-QG-GLKAATNGPTISLTPAPKERNRNKNNGGCC 221
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 152/215 (70%), Gaps = 2/215 (0%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+VL+G+S+VGKS +L+RF R+EF+++SK TIGVEF TRT+ + K +KA
Sbjct: 7 DYSYDYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRAVT+AYYRGAVGA+LVYDIS S++ RWL EL+ HAD NIV+ L+
Sbjct: 67 QIWDTAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL RAVPT++AK FA ++GL F E SAL + NVE AF ++ I+++V+K
Sbjct: 127 GNKSDLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKHQFD 186
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMC 222
+ GN N G+ I L P P K S C
Sbjct: 187 MND-YGNDNKPITGGQTITLTPTPKDSKIKKDSCC 220
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 147/181 (81%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y+FK+V+IGDSAVGKS +L R+ARNEF+ +SKATIGVEFQT++++I K VKA
Sbjct: 4 DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKA 63
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQER+RAVTSAYYRGAVGA++VYDI+R +F+++ RWL+EL +H+D + +LI
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 123
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DLE RAV E+ K A+ EGLFF+ETSAL++TNV+ AF V+ EI++ +++K L
Sbjct: 124 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 183
Query: 189 A 189
+
Sbjct: 184 S 184
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 156/209 (74%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
++ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 QQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQNSSRTNA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ +G++ PGP ++ CC
Sbjct: 190 ITLGSAQAGQE---PGPGEK-----RACC 210
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 148/194 (76%), Gaps = 8/194 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN-------- 186
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQRQNSTRTNA 189
Query: 187 LTAGEGQGNGNPAS 200
+T G QG P S
Sbjct: 190 ITLGGAQGGQEPGS 203
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 162/222 (72%), Gaps = 12/222 (5%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
+IDYVFKVV++GD+AVGK+Q+LARFAR+EF+LDSK TIGVEFQTRTL + K VK QIWD
Sbjct: 26 EIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWD 85
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGA+GAM+VYD++RR +F+H+ RW+EELR+HAD + V+ LIGNK+
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKA 145
Query: 133 DL-EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
D+ +R VP ++A A+ +GLFF E SAL NVE AF+T+L E+F V+++ L E
Sbjct: 146 DMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALELDE 205
Query: 192 --------GQGNGNPASLSGKKILVPGPAQEIPA--KSSMCC 223
G G G SL G + V G E A +SS C
Sbjct: 206 ARRMRGDQGDGGGEVLSLKGTAVDV-GSIMETSAMKRSSQCA 246
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 157/214 (73%), Gaps = 12/214 (5%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIW
Sbjct: 7 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNK
Sbjct: 67 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDL + R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 127 SDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQR----- 181
Query: 192 GQGNGNPASLSGKKILVPGP-AQEI-PAKSSMCC 223
Q N +++ L GP QE+ P + CC
Sbjct: 182 -QNNARTNAIT----LGSGPTGQELGPGEKRACC 210
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 151/210 (71%), Gaps = 8/210 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+VLIGDSAVGKS +L+RFARNEF +SKATIGVEFQT+ + I K VKAQIWDTA
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDI+RR +FD RWL+EL H D V +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E R V E+ K A++EGLFF+ETSAL++TNV AF V+ EI+N V++K L +
Sbjct: 131 ENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNS----- 185
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
+ A LS ++ L G A K CC
Sbjct: 186 DSYKAELSENRVSLADGGAS--SKKGFSCC 213
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 152/209 (72%), Gaps = 2/209 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ ++ K VKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD+N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPT++AK +AQ+ + F ETSAL A NV+ AF ++T I+ +V+K + E G
Sbjct: 131 AHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSEKSG 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G I + + E KS+ CC
Sbjct: 191 GGTMP--RGPTISLTPASNEKTKKSNNCC 217
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 154/208 (74%), Gaps = 3/208 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK V++GDS VGK+ +L+RF RNEFS+DSK+TIGV+F T+ + + +K VKAQ+WDTA
Sbjct: 8 DYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQ+RYRA+T+AYYRGAVGA+LVYDI+RR ++D++ RWL+ELR AD N VI+L+GNKSDL
Sbjct: 68 GQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ RAV TE+A F+ + GL FLETSAL+++NV+ AF TV+ +IF IV+ + L E
Sbjct: 128 KHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSE--- 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMC 222
N A +G I + + K C
Sbjct: 185 NEVSAPGAGAPIKIDNSTETQTTKGGCC 212
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 151/217 (69%), Gaps = 12/217 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS IL+RF R EF+L+S++TIGVEF T+++ I K VKAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+R SF++ RWL+ELR HAD +IV++L+GNK DL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAG-- 190
RAV ++AK+F L F+ETSALEATNVE AF +L +I+ + + K L AG
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLRAGAD 192
Query: 191 ----EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E Q L G Q+I S CC
Sbjct: 193 TPSIEEQQERMRVQLEG----ATSGGQQIQTHHSKCC 225
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 156/214 (72%), Gaps = 11/214 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGKS +L+RF +NEFS DS+ TIGVEF TRT+ + ++KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LVYDI++ +++ + RWL+EL HAD+++V++L+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DLE +R+VP+E+AK+FA K GL FLETSALE+TNVE AF VL EI V+ + + G
Sbjct: 124 KTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREVLRG 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
P S + + E ++ CCR
Sbjct: 184 -------PIS----AVSLNSSGAESTEENKPCCR 206
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 143/181 (79%), Gaps = 4/181 (2%)
Query: 7 YGDP----NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 62
YG P + DY+FKVVLIGDS VGKS +L+RF R+ F L+SK+TIGVEF TR + I
Sbjct: 13 YGSPMSGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNID 72
Query: 63 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKN 122
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ + QSF ++ WL ELR HA+KN
Sbjct: 73 GKVIKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKN 132
Query: 123 IVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
IV++L+GNK DL R V TEDA+ FAQ++GL F+ETSAL++TNVE AF +L +I++IV
Sbjct: 133 IVMMLVGNKCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIV 192
Query: 183 N 183
+
Sbjct: 193 S 193
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 142/180 (78%), Gaps = 4/180 (2%)
Query: 7 YGDP----NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 62
YG P + DY+FKVVLIGDS VGKS +L+RF R+ F L+SK+TIGVEF TR + I
Sbjct: 2 YGSPMSGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNID 61
Query: 63 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKN 122
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ + QSF ++ WL ELR HA+KN
Sbjct: 62 GKVIKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKN 121
Query: 123 IVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
IV++L+GNK DL R V TEDA+ FAQ++GL F+ETSAL++TNVE AF +L +I++IV
Sbjct: 122 IVMMLVGNKCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIV 181
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 153/216 (70%), Gaps = 7/216 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + ++VFKVVLIG+S VGK+ +L+RF RNEF+ DS+ TIGVEF TRT+++ VK
Sbjct: 2 GSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAG ERYRA+TSAYYRGAVGA++V+DI++ Q++D + RWL+EL HA+ NIV++L
Sbjct: 62 AQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL + R VP E+AK FA GL F+ETSAL++TNVE AF T+L EIF+ V ++
Sbjct: 122 VGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQK- 180
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N SL+ + P A + CC
Sbjct: 181 ---QRNSQSNAVSLANES---PESAAAARMEKRQCC 210
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 154/210 (73%), Gaps = 10/210 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPT++A+ FA+ GL F+ETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSKQR----QNNS 185
Query: 195 NGNPASLSGKKILVPGPAQEI-PAKSSMCC 223
N +LS + P QE+ + CC
Sbjct: 186 RANAVTLSNAQ-----PGQELGSVERKACC 210
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 151/217 (69%), Gaps = 12/217 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS IL+RF R EF+L+S++TIGVEF T+++ I K VKAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDIS+R SF++ RWL+ELR HAD +IV++L+GNK DL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAG-- 190
RAV ++AK+F L F+ETSALEATNVE AF +L +I+ + + K L AG
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLRAGAD 192
Query: 191 ----EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E Q L G Q+I S CC
Sbjct: 193 TPSIEEQQERMRVQLEG----ATSGGQQIQTHHSNCC 225
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 161/225 (71%), Gaps = 6/225 (2%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M S YG DY+FK+VLIGDS VGKS +L+RF NEF+L+SK+TIGVEF TRT+
Sbjct: 1 MNSSEDYG---YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIK 57
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
++ K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ ++++ WL EL+ +AD
Sbjct: 58 VEDKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENAD 117
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
N+ I LIGNKSDLE RAVPTE+A+ FA + LFF ETSAL + NV+ AF ++ +I+
Sbjct: 118 DNVAIGLIGNKSDLEHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYK 177
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQ-EIPAKSSMCC 223
+VNK + GE G+ + G I L P P + + +KS+ CC
Sbjct: 178 MVNKHQVDLGE-NAKGSSGAPKGPTISLAPVPGEKKKKSKSNSCC 221
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 150/210 (71%), Gaps = 3/210 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF NEF++DSK+TIGVEF TRT+ + K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+AK+FA + L F ETSAL + NV+ AF ++T I V+K +
Sbjct: 131 AHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSNANK 190
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
G A +G I L P P ++ + S+ CC
Sbjct: 191 PG--AGPNGPTISLTPAPNEKKKSSSNNCC 218
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 147/194 (75%), Gaps = 8/194 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ ++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN-------- 186
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQRQNSTRTNA 189
Query: 187 LTAGEGQGNGNPAS 200
+T G QG P S
Sbjct: 190 ITLGSAQGGQEPGS 203
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 155/211 (73%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+VLIGDSAVGKS +L+RF+R+EF +SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA++VYDI+R +F+ + RWL+EL +H D + +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E+ RAV E+ K A++EGLFF+ETSAL+ATNV+ AF V+ EIFN V++K L +
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNS----- 184
Query: 195 NGNPASLSGKKILVPG--PAQEIPAKSSMCC 223
+ A LS ++ + E ++ CC
Sbjct: 185 DAYKAELSVNRVSLVNNQDGSESSWRNPSCC 215
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 153/216 (70%), Gaps = 7/216 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + ++VFKVVLIG+S VGK+ +L+RF RNEF+ DS+ TIGVEF TRT+++ VK
Sbjct: 2 GSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAG ERYRA+TSAYYRGAVGA++V+DI++ Q++D + RWL+EL HA+ +IV++L
Sbjct: 62 AQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNK+DL + R VP E+AK FA GL F+ETSAL++TNVE AF T+L EIF V K+
Sbjct: 122 VGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQK- 180
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N SL+ + P + A+ CC
Sbjct: 181 ---QRSSQSNTVSLASES---PASTAPVQAERRPCC 210
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 147/173 (84%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY++K+VLIGDS VGKS +L+RF RNEFSL++K+TIGVEF TRT+ + K++KAQ+W
Sbjct: 7 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI+++ ++ + RWL ELR +AD+NI I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
SDL R V T++AKEF++K L F+ETSAL+++NVE AF +LT+I++++++
Sbjct: 127 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSR 179
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 155/209 (74%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNSPRSNA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ +G++ PGP Q+ CC
Sbjct: 190 IALGSAQAGQE---PGPGQK-----RACC 210
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 160/217 (73%), Gaps = 9/217 (4%)
Query: 8 GDPNQK-IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
G+ N++ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +V
Sbjct: 2 GNGNEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL + R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ ++ +G++ PGP ++ CC
Sbjct: 182 QNSTRTNAITLGSAQAGQE---PGPGEK-----RACC 210
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 157/219 (71%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIG S VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ ++++ RWL+ELR HAD NIVI L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRL 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+G KS L RAVPT++A+ F++K L F+ TSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGTKSALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN + I VP CC+
Sbjct: 182 ADRAAHDESPGN----NFVDISVPPTTDGQNPNKLQCCQ 216
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 147/194 (75%), Gaps = 8/194 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN-------- 186
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSSRSSA 189
Query: 187 LTAGEGQGNGNPAS 200
+T G Q P S
Sbjct: 190 ITLGSAQAGQEPGS 203
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
Query: 32 QILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAV 91
+L+RF RNEF+L+SK+TIGVEF TR++ + K+VKAQIWDTAGQERYRA+TSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 92 GAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQK 151
GA+LVYDI++ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL+ RAV T++AK+FA +
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 152 EGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGP 211
GL F+ETSAL+A+NVE+AF +LT+I+ IV+ K+L E G+ S G+ ILV
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL---ESSGDVIKPS-GGETILVAPT 192
Query: 212 AQEIPAKS-SMCC 223
A + AKS S CC
Sbjct: 193 ADDGGAKSGSKCC 205
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 145/179 (81%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
GG + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T+++ I
Sbjct: 3 GGSMSGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDG 62
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
+++KAQIWDTAGQERYRA+T+AYYRGAVGA+LVYDI++R++F+++ WL ELR++ + ++
Sbjct: 63 RTIKAQIWDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDM 122
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
V++L+GNK DL R V TEDAK +A++ GLFF+ETSALE+T VENAF +L IF V
Sbjct: 123 VVMLVGNKCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAV 181
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 155/211 (73%), Gaps = 11/211 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TR++ + ++KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LVYDI++ +++ + RWL+EL HAD +IV++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R VPTE+AK+FA GL F+ETSALE+TNVE+AF+ VLT I V K +T G
Sbjct: 128 ATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG---- 183
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCCR 224
S+S + GP++E +S CC+
Sbjct: 184 -----SISAVTLGQTHGPSREFQ-ESRSCCK 208
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 152/208 (73%), Gaps = 6/208 (2%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK+VLIGDSAVGKS +L+RFARNEF +SKATIGVEFQT+ + I K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVTSAYYRGA GA++VYDISRR +F+ I RWL+EL + D + +L+GNK DLE
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
R V E+ K A++EGLFF+ETSAL++TNV+ AF V+ EI+N +++K L + +
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNS-----D 186
Query: 196 GNPASLSGKKI-LVPGPAQEIPAKSSMC 222
A LS ++ LV G + SS C
Sbjct: 187 SYKAELSVNRVTLVNGSGSKKNMFSSCC 214
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 156/220 (70%), Gaps = 10/220 (4%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSV 66
+ ++ DY+FK+VL+GDS VGKS +L RF RNEF LDSK+TIGVEF T+T+ ++ K V
Sbjct: 3 SEKEEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVV 62
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERY+A+T+AYYRGA GA+LVYDI++R S ++IPRWL ELR H D +V++
Sbjct: 63 KAQIWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVM 122
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNK DL R V E K+ A++EGL FLETSAL++TNVE AF ++ EI+ ++ KK
Sbjct: 123 LVGNKCDLRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKA 182
Query: 187 LTAGEGQGNGNPASLSGKK---ILVPGPAQEIPAKSSMCC 223
L N + S + K+ +++ P+ +K CC
Sbjct: 183 LV------NESTQSFALKQDNTVVIRDPSAAKSSKKKKCC 216
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 155/215 (72%), Gaps = 11/215 (5%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
++ ++VFKVVLIG+S VGKS +L+R+ +NEF+ DS+ TIGVEF TRT+ + ++KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQ 62
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAG ERYRA+TSAYYRGAVGA+LVYDI++ ++D + RWL+EL HA+ NIV++L+G
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVG 122
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DLE +R+VPTE+A+ FA+ L FLE+SALE+TNVE AF VL EI + K L
Sbjct: 123 NKTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQ 182
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
G +G SL+ K EI ++ CCR
Sbjct: 183 GANRG----VSLNSSK-------AEIITENKPCCR 206
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 155/211 (73%), Gaps = 7/211 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+VLIGDSAVGKS +L+RF+R+EF +SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGA GA++VYDI+R +F+ + RWL+EL +H D + +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E+ RAV E+ K A++EGLFF+ETSAL+ATNV+ AF V+ EIFN V++K L +
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNS----- 184
Query: 195 NGNPASLSGKKILVPG--PAQEIPAKSSMCC 223
+ A LS ++ + E ++ CC
Sbjct: 185 DAYKAELSVNRVSLVNNQDGSESSWRNPSCC 215
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 152/209 (72%), Gaps = 9/209 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R VPT++A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQR----QNNA 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N +L + P QE+ ++ C
Sbjct: 186 RANAITLGSAQ-----PGQELGSEEKKAC 209
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 154/210 (73%), Gaps = 10/210 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR----QNST 185
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
N +L G + PGP ++ CC
Sbjct: 186 RTNAITLGGAQAGQEPGPGEK-----RACC 210
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 155/209 (74%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 14 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 73
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 74 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 133
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 134 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNA 193
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ +G++ PGP ++ CC
Sbjct: 194 ITLGSAQAGQE---PGPGEK-----RACC 214
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 153/211 (72%), Gaps = 7/211 (3%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK+V+IGDSAVGKS +L+RFARNEF +SKATIGVEFQT+ + I K +KAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVTSAYYRGAVGA++VYDI+RR SFD + RWL+EL +H D I +L+GNK DL+
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
R V ++ K A++E LFF+ETSAL++TNVE AF V+ EI+N +++K L + +
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILNS-----D 188
Query: 196 GNPASLSGKKI-LVPGPAQEIPAKSSMCCRT 225
A L+ ++ LV G S CC T
Sbjct: 189 SYKAELTANRVSLVNGDTSSKKYGFS-CCNT 218
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 154/209 (73%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 HQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQNSTRTNA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ +G++ PG Q+ CC
Sbjct: 190 IALGSAQAGQE---PGAGQK-----RACC 210
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 155/211 (73%), Gaps = 11/211 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TR++ + ++KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LVYDI++ +++ + RWL+EL HAD +IV++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R VPTE+AK+FA GL F+ETSALE+TNVE+AF+ VLT I V K +T G
Sbjct: 128 ATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG---- 183
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCCR 224
S+S + GP++E +S CC+
Sbjct: 184 -----SISAVTLGQTHGPSREFQ-ESRGCCK 208
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 142/179 (79%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
GG ++ DY+FK+VLIGDS VGKS +L+RF R+ F+L+SK+TIGVEF TR + I
Sbjct: 3 GGSTSGKEEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDG 62
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ QSF ++ WL+EL HA+KNI
Sbjct: 63 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNI 122
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
V++L+GNK DL R+V TEDA+ FAQ++GL F+ETSAL++TNVE AF +L I++IV
Sbjct: 123 VVMLVGNKCDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIV 181
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 151/210 (71%), Gaps = 10/210 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR----QNSA 185
Query: 195 NGNPASLSGKKILVPGPAQEI-PAKSSMCC 223
N SL + QE P + CC
Sbjct: 186 RTNAISLGSAQ-----AGQEAGPGEKRACC 210
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 156/222 (70%), Gaps = 3/222 (1%)
Query: 2 ASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 61
ASG P VL S + KS +L+RF RNEFSL+SK+TIGVEF TR++
Sbjct: 3 ASGKSSSIPTALPRSCTTPVLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQC 62
Query: 62 QHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK 121
+ K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ SFD++ RWL+EL+ HAD
Sbjct: 63 EGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADA 122
Query: 122 NIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
NIVI+L+GNKSDL+ +AV T+DA FA+ GL F+ETSAL+ +NVE AF ++L+EI+ +
Sbjct: 123 NIVIMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRL 182
Query: 182 VNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+KK L G N A + + I++ PA E + + CC
Sbjct: 183 GSKKALEKG---STSNFAPNATQTIVINPPADEGKTEKAKCC 221
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 148/197 (75%), Gaps = 8/197 (4%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
++ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQ
Sbjct: 5 TDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+G
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN--- 186
NKSDL + R VPTE+A FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 125 NKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNS 184
Query: 187 -----LTAGEGQGNGNP 198
+T G Q +P
Sbjct: 185 TRTSAITLGNAQAGQDP 201
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 153/210 (72%), Gaps = 10/210 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR----QNSI 185
Query: 195 NGNPASLSGKKILVPGPAQEI-PAKSSMCC 223
N +L + P QE P + CC
Sbjct: 186 RTNAITLGSAQ-----PGQEPGPGEKRACC 210
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 153/210 (72%), Gaps = 10/210 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPT++A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR----QNSS 185
Query: 195 NGNPASLSGKKILVPGPAQEI-PAKSSMCC 223
N +L + P QE P + CC
Sbjct: 186 RTNAITLGSAQ-----PGQEPGPGEKRACC 210
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 155/209 (74%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ +G++ PGP ++ CC
Sbjct: 190 ITLGSAQAGQE---PGPGEK-----RACC 210
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 143/178 (80%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VK
Sbjct: 1 GSHMEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 60
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L
Sbjct: 61 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 120
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+GNKSDL + R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 121 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 154/209 (73%), Gaps = 9/209 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPT++A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTNA 189
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
++ +G++ PGP + CC
Sbjct: 190 ITLSSAQAGQE---PGPGKR------ACC 209
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 154/209 (73%), Gaps = 4/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+ K+VLIGDS VGK+ +LARF R++F+ +SK+TIGVEF ++T+ I+ K++KAQIWDTA
Sbjct: 7 DYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGA+GA+L+YDI+ +F+ + +WL+ELR +AD+ I+++L+GNK DL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKCDL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
EQRAV + +A EFA+ + L F+ETSA EATNV AF T++ EI N +NK+N+ A E +
Sbjct: 127 SEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNV-AAEEKA 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N G I +E K CC
Sbjct: 186 NVQETPRQGVSITATKSPEE---KKKGCC 211
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 152/221 (68%), Gaps = 24/221 (10%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQI
Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN---- 186
KSDL + R VPTE+A FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 126 KSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNST 185
Query: 187 ----LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+T G Q +P P + CC
Sbjct: 186 RTSAITLGNAQAGQDPG----------------PGEKRACC 210
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 158/219 (72%), Gaps = 8/219 (3%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + ++VFKVVLIG+S VGK+ +L+RF RNEF+ DS+ TIGVEF TRTL I VK
Sbjct: 2 GSEEEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
+QIWDTAG ERYRA+TSAYYRGAVGA+LVYDI++ QS++ + RWL+EL HAD +IV++L
Sbjct: 62 SQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVML 121
Query: 128 IGNKSDL-EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
+GNKSDL +E + VP+E+AK +A++ GL F+ETSAL+ATNVE AF T+L +I+ V K
Sbjct: 122 VGNKSDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSK 181
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPA-QEIPAKSSMCCR 224
G P++++ K P + ++ + CC+
Sbjct: 182 ------GGIQQPSTINLSKEASPTQSITQVTEQKRSCCQ 214
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 155/210 (73%), Gaps = 8/210 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGKS +L+RF +NEF DS+ TIGVEF TRT+ +++ +KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LVYDIS+ +++ RWL+EL HAD +IV++L+GNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ QR VPTE+A+ FA ++GL F+ETSAL++TNVE+AF VLT I V + +T +G
Sbjct: 128 QSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHKKVASREVT----RG 183
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + +LSG G E + CC+
Sbjct: 184 SISAVTLSGP----IGLNSEQQEERKGCCK 209
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 154/212 (72%), Gaps = 10/212 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FK+VLIGDS VGK+ +L+RF +NEF++DSK TIGVEF T+T++ ++K +KAQIWDTA
Sbjct: 10 DFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQE+YRA+T+AYYRGAVGA+ +YDI+++Q+FD++ +WL ELR +AD NI+ +LIGNK DL
Sbjct: 70 GQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLIGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK---NLTAGE 191
+E R V TEDA +FA++ L F+ETSA +A NV+ AF ++TEI+N + + +
Sbjct: 130 QEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTRPNEEKKKAQ 189
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
Q NGN K+ P Q K CC
Sbjct: 190 PQQNGNNIIKDFKQ-----PTQ--AEKEKKCC 214
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 152/221 (68%), Gaps = 24/221 (10%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQI
Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN---- 186
KSDL + R VPTE+A FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 126 KSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNST 185
Query: 187 ----LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+T G Q +P P + CC
Sbjct: 186 RTSAITLGSAQAGQDPG----------------PGEKRACC 210
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 150/194 (77%), Gaps = 8/194 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--------N 186
+ R VPT++A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 130 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTNT 189
Query: 187 LTAGEGQGNGNPAS 200
+T G+ Q +P+S
Sbjct: 190 ITLGDTQPGQDPSS 203
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 143/175 (81%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+ SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTSAYYRGAVGA++VYDISRR +F+ + RWL+EL++H+D + +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
+ RAV E+ K A+ +GLFF+ETSAL +TNV+ AF V+ +I+ ++K L +
Sbjct: 130 DNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQLNS 184
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 141/173 (81%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF NEF+L+SK+TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+ RAVPT++AK FAQ+ L F ETSAL+++NV+ AF ++T I+ +V+K +
Sbjct: 131 DHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSKHQV 183
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 160/223 (71%), Gaps = 8/223 (3%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
GY + DY+FKVVLIGDSAVGKS +L R+ARNEF+ +SKATIGVEFQT+++ I K
Sbjct: 2 GYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKE 61
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
VKAQ+WDTAGQER+RAVTSAYYRGA+GA++VYDI+R+Q+F++I +WL+ELR++ ++V
Sbjct: 62 VKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVT 121
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNK DL + R V E+ KE A+ E LFF+ETSAL +TNV+ AF V+ EIF+ +++
Sbjct: 122 MLVGNKCDLTDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR 181
Query: 186 NLTAGEGQGNGNPASLSGKKILVPGPA-----QEIPAKSSMCC 223
+ + + P G+K+ + G Q+ + CC
Sbjct: 182 IVPDDYDKDDRVP---RGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 143/175 (81%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQI
Sbjct: 19 SEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 78
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GN
Sbjct: 79 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 138
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
KSDL + R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 139 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 152/207 (73%), Gaps = 4/207 (1%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + +Y++K+VLIGDS VGKS +L+RF R+EF+L+S++TIGVEF TRTL I K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKA 66
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDI++ +S++ + RWL+EL+ HAD NI+I L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELV 126
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNKSDL+ RAVPTE+AK FA + L F E SAL + NV+ +F +L I+ +++K L
Sbjct: 127 GNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL- 185
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQE 214
E + + G I L P P ++
Sbjct: 186 --ENNDSKQTNTAGGPTISLTPAPQEK 210
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 136/168 (80%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+ DY+FKVVLIGDS VGKS IL+RF R EF+L+S++TIGVEF T+++ I K VKAQIW
Sbjct: 10 EDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIW 69
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDIS+R SF++ RWL+ELR HAD +IV++L+GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNK 129
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
DL RAV ++AK+F L F+ETSALEATNVE AF +L +I+
Sbjct: 130 CDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIY 177
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 151/214 (70%), Gaps = 24/214 (11%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL+GDS VGKS +L+RF RN FSLDSK+TIGVEF TRT+ + K++KAQIWDTA
Sbjct: 17 DYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 76
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD-KNIVIILIGNKSD 133
GQERYRA+TSAYYRGA GA+LVYD++R +F+ RWL ELR HAD + ++L+GNK+D
Sbjct: 77 GQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTD 136
Query: 134 L---------EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
L RAVP DA A++EGL F+ETSAL+ATNV+ AF T+LTEI+ V++
Sbjct: 137 LARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSR 196
Query: 185 KNLTA----------GEGQG----NGNPASLSGK 204
K L A GEGQ G+ A L+ +
Sbjct: 197 KALAASSAGDDAAAVGEGQAIQVSAGDSAGLTTR 230
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 153/191 (80%), Gaps = 3/191 (1%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+ DY++K+VLIGDS VGKS +L+RF RNEF+L++K+TIGVEF TRT+V + K++KAQIW
Sbjct: 9 EDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIW 68
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKN--IVIILIG 129
DTAGQERYRA+TSAYYRGAVGA+LVYDI+++ ++ + RWL ELR +AD+N I I+L+G
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVG 128
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN-LT 188
NKSDL R V T++AKEFA+K L F+ETSAL+++NV+ AF T+LT+I + +++ +
Sbjct: 129 NKSDLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPTPIG 188
Query: 189 AGEGQGNGNPA 199
A G + +P+
Sbjct: 189 APSGHDDNSPS 199
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 155/218 (71%), Gaps = 10/218 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF NEF+++SK+TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ ++++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE-GQ 193
RAVPT++AK FA + L F ETSAL + NV+ AF ++T I+ +V+K + G+ G
Sbjct: 131 AHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSGN 190
Query: 194 GNGNPASLSGKKI-LVPGP------AQEIPAKSSMCCR 224
+ N + G I L P P AQ I KS CR
Sbjct: 191 NDINNGTPKGPTISLTPAPNEKKKAAQTIVVKS--VCR 226
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 144/180 (80%)
Query: 6 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
GY + DY+FKVVLIGDSAVGKS +L R+ARNEF+ +SKATIGVEFQT+++ I K
Sbjct: 2 GYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKE 61
Query: 66 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVI 125
VKAQ+WDTAGQER+RAVTSAYYRGA+GA++VYDI+R+Q+F++I +WL+ELR++ ++V
Sbjct: 62 VKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVT 121
Query: 126 ILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+L+GNK DL R V E+ KE A+ E LFF+ETSAL +TNV+ AF V+ EIF+ +++
Sbjct: 122 MLVGNKCDLTNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR 181
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 151/217 (69%), Gaps = 16/217 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQI
Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL + R VPTE+A FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 126 KSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQRQNST 185
Query: 191 EGQ----GNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GN SG P + CC
Sbjct: 186 RANAITLGNAEAGQDSG------------PGEKRACC 210
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 142/174 (81%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIW
Sbjct: 7 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNK
Sbjct: 67 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
SDL + R VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 127 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 160/215 (74%), Gaps = 8/215 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRTL + VK+QIW
Sbjct: 6 EEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQIW 65
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAG ERYRA+TSAYYRGAVGA+LVYDI++ QS++++ RWL+EL HAD +IV++L+GNK
Sbjct: 66 DTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGNK 125
Query: 132 SDL-EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
DL +E + VP+E+AK +A++ GL F+ETSAL+ATNVE AF T+L +I+ V K L G
Sbjct: 126 CDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLK--LKGG 183
Query: 191 EGQGNGNPASLSGKKILVPGPA-QEIPAKSSMCCR 224
Q P++++ K P + ++ + CC+
Sbjct: 184 IQQ----PSTINLSKEASPTQSITQVTEQKRSCCQ 214
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 132/163 (80%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKV LIGDS VGKS + RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTE 177
AV TED A++E L F+ETSALEATNV+NAF VL++
Sbjct: 131 RHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSK 173
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 161/222 (72%), Gaps = 12/222 (5%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G ++ ++VFKVVLIG+S VGK+ +L+RF RNEF+ DS+ TIGVEF TRTL I VK
Sbjct: 2 GSEEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
+QIWDTAG ERYRA+TSAYYRGAVGA+LVYDI++ QS++ + RWL+EL HAD +IV++L
Sbjct: 62 SQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVML 121
Query: 128 IGNKSDL-EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
+GNK DL +E + VP+E+AK +A++ GL F+ETSAL+ATNVE AF ++L +I+ V K
Sbjct: 122 VGNKCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLK-- 179
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEI---PAKSSMCCRT 225
+ GE Q P++++ K P Q I + CC++
Sbjct: 180 -SKGETQ---QPSTINLSK--EASPTQSITLVTEQKRSCCQS 215
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 155/219 (70%), Gaps = 18/219 (8%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DYVFKVV+IGDS VGKSQ+L FARN +L+SK+TIGVEF TR++ + K VKAQIW
Sbjct: 6 KEYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFL------ETSALEATNVENAFMTVLTEIFNIVNKK 185
+DL RAV TEDAK FA+ E FF+ ETSAL + AF VLT+I+ I ++K
Sbjct: 125 ADLRHLRAVATEDAKAFAEMESTFFMGNIRYGETSAL-----KEAFKNVLTDIYRIASQK 179
Query: 186 NLTAGEGQGNGNPASLSGK-KILVPGPAQEIPAKSSMCC 223
NL+A N L G+ K++ QE KS C
Sbjct: 180 NLSA-----NAAQTHLQGQGKVVQNDDVQEPQGKSKRSC 213
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 154/211 (72%), Gaps = 11/211 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TR++ + ++KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LVYDI++ +++ + RWL+EL HAD +IV++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R VPTE+AK+FA L F+ETSALE+TNVE+AF+ VLT I V K +T G
Sbjct: 128 ATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG---- 183
Query: 195 NGNPASLSGKKI-LVPGPAQEIPAKSSMCCR 224
S+S + GP++E +S CC+
Sbjct: 184 -----SISAVTLGQTHGPSREFQ-ESRGCCK 208
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDS VGKS +L+RFA++EF LDSK TIGVEF R + + K +KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GAMLVYDIS R S++++ +WL ELR +++V++L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL+E R V E+ K FA+ EGL F+ETSAL+ NVE F+ ++T I+++ ++KNL A
Sbjct: 126 KCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAAK 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA--KSSMCC 223
+ N L+GK+I + A E+ A ++S CC
Sbjct: 186 MEEQPINL--LNGKEIHI---ADEVTATKQTSTCC 215
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 138/170 (81%), Gaps = 5/170 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL+GDS VGKS +L+RF RN FSLDSK+TIGVEF TRT+ + K++KAQIWDTA
Sbjct: 18 DYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 77
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD-KNIVIILIGNKSD 133
GQERYRAVTSAYYRGAVGA+LVYD+++ +F + RWL ELR HAD + ++L+GNK+D
Sbjct: 78 GQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVGNKTD 137
Query: 134 LEEQ----RAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
L +Q RAVP D A++EGL F+ETSAL+ATNV+ AF+T+LTEI+
Sbjct: 138 LAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIY 187
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 151/212 (71%), Gaps = 3/212 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ +++K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEG 192
RAVPT++AK FA + + F ETSAL + NV+ AF ++ IF +V+K +L
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVDLNGSGT 190
Query: 193 QGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
G+ G I L P P + KSS CC
Sbjct: 191 NNGGSNGGPKGPTISLTPAPNEGKKKKSSNCC 222
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 142/175 (81%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
+Y+FK+V+IGDSAVGKS +L+R+ARNEF+ SKATIGVE +T+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
QER+RAVTSAYYRGAVGA++VYDISRR +F+ + RWL+EL++H+D + +L+GNK DL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
E RAV E+ K A+ EGLFF+ETSAL++TNV+ AF V+ +I+ +++K L +
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNS 184
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 135/157 (85%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
VPT++A+ FA+K L F+ETSAL++TNVE AF +LT
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 155/220 (70%), Gaps = 12/220 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDSAVGKS +L+RF+R+EF LDSK TIGVEF R + + K +KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+LVYDI+RR +FD++ +WL ELR ++V++L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSD+ R V +D K A+ E L+F+ETSALE NVE AFM ++T I I ++K+L A
Sbjct: 126 KSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEAK 185
Query: 191 EGQGNGNPASLSGKKILVPGPA-----QEIPA--KSSMCC 223
+ N ++S K L G E+ A ++S CC
Sbjct: 186 K-----NETTISTIKALPVGKEVINIDDEVSATKQASYCC 220
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 150/203 (73%), Gaps = 4/203 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF NEF+L+SK+TIGVEF T+ L I + +VKAQI
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDT+GQERYRA+T AYYRGAVGA+LVYDI+R+ SF ++ WL+ELR HAD NIVI+L+GN
Sbjct: 62 WDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGN 121
Query: 131 KSDL-EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
K DL E R V TED A++EG F+ETSAL+ATNV+ AF TV I++ + KK +
Sbjct: 122 KVDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQS 181
Query: 190 GEGQGNGNPASLSGKKILVPGPA 212
+ N A G++I + P+
Sbjct: 182 ADAATNQPTA---GERIQLRPPS 201
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 160/216 (74%), Gaps = 8/216 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDS VGKS +L+RFA++EF LDSK TIGVEF R + + K +KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GAMLVYDISRR S++++ +WL ELR +++V++L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 131 KSDLEEQ-RAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
K DL+ Q R V E+ K FA+ EGL F+ETSAL+ NVE F+ ++T I+++ ++KNL A
Sbjct: 126 KCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAA 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA--KSSMCC 223
+ N L+GK+I + A E+ A +SS CC
Sbjct: 186 KMDEKPINL--LNGKEIHI---ADEVTATKQSSTCC 216
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 158/207 (76%), Gaps = 1/207 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DYVFKVV+IGDSAVGK+Q+L RF ++EF +DSK+TIG+EFQTRT+ I K VKAQIWDTA
Sbjct: 5 DYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTA 64
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRAVTSAYYRGA+GAMLVYD++ R+SF H RWL +LR+HAD +IV++LIGNK+DL
Sbjct: 65 GQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNKADL 124
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV ++A FA+ +GLFF E SAL NVE AF+ +L EI IV++++L +G
Sbjct: 125 SHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMDGI- 183
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM 221
NG+ A+ + +++ G + + S+
Sbjct: 184 NGDAAANANAALMLRGTKLSLSDELSI 210
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIGDS VGKS +L R+ +NEF+L+SK+TIGVEF TR++ +K++KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDIS+ +++++ +WL+ELR HAD +IVI+L+GNKSDL R
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF-NIVNKKNLTAGEGQGNGN 197
VPTE+AK FAQ+ L F+ETSAL +TNVE AF T+L EI+ N+V A + + N N
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVRTLGGGAADDKDNKN 179
>gi|75337332|sp|Q9SJZ5.1|RAA4E_ARATH RecName: Full=Putative Ras-related protein RABA4e; Short=AtRABA4e
gi|4544452|gb|AAD22360.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 176
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 134/176 (76%), Gaps = 25/176 (14%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+++DYVFKVVL GDSAVGKSQ+ ARF R+EFS+DSKATI FQ
Sbjct: 4 EEVDYVFKVVLNGDSAVGKSQLRARFTRDEFSMDSKATIRCRFQYSN------------- 50
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
+ YY+GAVGAMLVYD++ R+SF+HIP+WLEELR HADKNIVIILIGNK
Sbjct: 51 ------------APYYKGAVGAMLVYDMTIRESFEHIPQWLEELRVHADKNIVIILIGNK 98
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+DLE QR+VP EDAKEFA+KEGLFFLETSAL +TNVEN+F T+LTEIFN VNKKNL
Sbjct: 99 TDLENQRSVPVEDAKEFAEKEGLFFLETSALNSTNVENSFNTLLTEIFNKVNKKNL 154
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 152/216 (70%), Gaps = 18/216 (8%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ + E +L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHCCVLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TED K +A+KE L+F+ETSALEATNVEN+F VLT+I+ I++KK A EG
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSKK---AVEGAE 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSM-------CC 223
NGN + VP ++I K+ + CC
Sbjct: 188 NGNAS--------VPAKGEKIDLKNDVSALKRVGCC 215
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 152/206 (73%), Gaps = 12/206 (5%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL + R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ Q N
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR------QNNARTN 174
Query: 200 SLSGKKILVPGPA-QEI-PAKSSMCC 223
+++ L GPA QE+ P + CC
Sbjct: 175 AVT----LGSGPAGQELGPGEKRACC 196
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 156/221 (70%), Gaps = 7/221 (3%)
Query: 6 GYGDPNQKI--DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
G D +KI ++V VVLIGDS VGKS +L+RF N+F+++SK+TIGVEF TRT+ ++
Sbjct: 13 GIFDETRKIFTNWVI-VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEG 71
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+
Sbjct: 72 KKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNV 131
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
+ LIGNKSDL+ RAVPT++A+ FAQ+ L F ETSAL++ NVE AF ++T I+ +V+
Sbjct: 132 AVGLIGNKSDLDHLRAVPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVS 191
Query: 184 KKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCC 223
K + G+ N P G I L P P + S CC
Sbjct: 192 KHQVDLGDSGNNNAP---KGPTISLTPAPNEHKKKSSGNCC 229
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 153/210 (72%), Gaps = 10/210 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEF+ DS+ TIGVEF TRT+++ +VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R VPT++A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +
Sbjct: 130 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR----QNSI 185
Query: 195 NGNPASLSGKKILVPGPAQEI-PAKSSMCC 223
N +L + QE+ P + CC
Sbjct: 186 RTNAITLGSAQ-----AGQELGPGEKRACC 210
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 135/157 (85%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL RA
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 176
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
VPT++A+ FA+K L F+ETSAL++TNVE AF +LT
Sbjct: 177 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 213
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 149/195 (76%), Gaps = 5/195 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+Q DY+FK+VLIGDS VGKS +L+RF ++EF+ D K TIGVEF TR+++ +K +KAQI
Sbjct: 5 DQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERY A+TSAYYRGAVGA+L+YDI++ SF +I +WL+E+R HA+ +IV++L+GN
Sbjct: 65 WDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ R V EDA FA+K + F+ETSAL+A+NVE F ++TEI+ ++NK+++
Sbjct: 125 KSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSMVP- 183
Query: 191 EGQGNGNPASLSGKK 205
N + +S KK
Sbjct: 184 ----ENNESQVSNKK 194
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 151/204 (74%), Gaps = 8/204 (3%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL++ R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ + +
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQNSSRTNAITLGS 180
Query: 200 SLSGKKILVPGPAQEIPAKSSMCC 223
+ +G++ PGP ++ CC
Sbjct: 181 AQAGQE---PGPGEK-----RACC 196
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 156/236 (66%), Gaps = 15/236 (6%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M G +P DY+FK+VLIGDS VGKS +L+R+ +NEF L SKATIGVE R +
Sbjct: 2 MRQGSTTSNPEDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVE 61
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I+ K+V+AQIWDTAGQERYRA+TSAYYRGA+GA+LVYDI++ SF ++ +W+EELR HA
Sbjct: 62 IEGKTVRAQIWDTAGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS 121
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
++ IILIGNKSDL+ R + K+FA + G+ F+ETSAL++TNV AF + IF+
Sbjct: 122 DDLSIILIGNKSDLKHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFD 181
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPA-----------KSSMCCRT 225
V ++N GQ + P +G+ I++ E+PA +S CC T
Sbjct: 182 KV-RQNELEKSGQAHEKP---NGESIVIKAELAELPATPNGKEHARTRQSKSCCGT 233
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 135/157 (85%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + +K+VKAQIWDTAGQERY
Sbjct: 20 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 79
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LVYDI++ ++++ RWL EL+ HAD NI+I+L+GNKSDL RA
Sbjct: 80 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRHLRA 139
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
VPT++A+ FA+K GL FLETSAL++TNVE AF +L+
Sbjct: 140 VPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNILS 176
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 134/156 (85%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + +K+VKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA+LVYDI++ ++++ RWL EL+ HAD NIVI+L+GNKSDL RAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
PT++A+ FA++ GL FLETSAL++TNVE AF +L+
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 137/172 (79%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK+VLIGDSAVGKS +L+RFARNEF +SKATIGVE QT+ + I K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVTSAYYRGA GA++VYDISRR +F+ I RWL+EL + D + +L+GNK DLE
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
R V E+ K A++EGLFF+ETSAL++TNV+ AF V+ EI+N +++K L
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 163/216 (75%), Gaps = 9/216 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDS VGKS +++RFA++EF LDSK TIGVEF R + ++ K +KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GAMLVYDI++R +F ++ +WL ELR +++V++L+GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL++ R V E+ K FA+ E L F+ETSAL+ NV+ AF+ ++T+I +I+++K+L
Sbjct: 128 KSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSL--- 184
Query: 191 EGQGNGNPASL-SGKKILVPGPAQEIPA--KSSMCC 223
E + NG +L SGK+I + A E+ A ++ CC
Sbjct: 185 ETKMNGTALNLPSGKEIHI---ADEVTATKQAKYCC 217
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 141/176 (80%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P ++ +Y+FK+V+IGDSAVGKS +L RF RNEF+ +KATIGV+F T+++ I +K + AQ
Sbjct: 2 PEEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQ 61
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
WDTAGQER+RAVTS YYRGAVGAM+VYDI+ + SF ++ RWL ELR A+ +I+I+++G
Sbjct: 62 CWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVG 121
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
NKSDLE R VPT++AK FA+ + FLETSAL +TNV AF T+LT+IFN+V+ K
Sbjct: 122 NKSDLEMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSK 177
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 146/176 (82%), Gaps = 1/176 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FKVVLIGDS VGKS +L+RF RN+F L++K+TIGVEF TR+++I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD-KNIVIILIG 129
WDTAGQERYRA+TSAYYRG +GA++VYDI++ Q+F++I RWL+ELR+HAD ++I I+L+G
Sbjct: 66 WDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
NK+DL RAVPT++A FA++ + F+ETSAL++TNVE A +LT I+ V+ K
Sbjct: 126 NKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK 181
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 137/170 (80%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF NEF+++SK+TIGVEF TRT+ ++ K +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ ++++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
RAVPT++AK FAQ+ L F ETSAL + NV+ AF ++T I+ +V+K
Sbjct: 131 AHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSK 180
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 139/162 (85%), Gaps = 1/162 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
DY+FK+VLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDT 68
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA+LVYDI+++ +F++I +WL+ELR +AD NIVI+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVL 175
L+ R + DA +FA+KE L F+ETSALEATNVE AF +L
Sbjct: 129 LKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 152/212 (71%), Gaps = 8/212 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY++K+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF TR++ ++ K +KAQ+WDTA
Sbjct: 10 DYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++++++F + RWL E+R HAD IV++L+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI---VNKKNLTAGE 191
+ RAV ++DAK++ + GL F+E SAL+ATNVE AF +T++ ++ KK L +
Sbjct: 130 KHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHVQLAKMKKELDGKD 189
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ AS + + P+Q CC
Sbjct: 190 TREGQTAASKQQNSVDLNKPSQ-----GKNCC 216
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 143/190 (75%), Gaps = 8/190 (4%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
V +VVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTAG
Sbjct: 34 VGRVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 93
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL +
Sbjct: 94 ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQ 153
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN--------LT 188
R VPTE+A FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +T
Sbjct: 154 AREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAIT 213
Query: 189 AGEGQGNGNP 198
G Q +P
Sbjct: 214 LGNAQAGQDP 223
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 148/214 (69%), Gaps = 13/214 (6%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGK+ +L RF RNEF+L+SK+TIGVEF TR++ + +K +KAQIWDT
Sbjct: 6 DYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIWDTG 65
Query: 75 GQERYRAVTS-----AYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
Y TS +YYRGAVGA+L YDIS+ +F+ + RWL+ELR HAD NIVI+L+G
Sbjct: 66 N---YFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIMLVG 122
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL RAVPT++AK+FA + GL F+ETSAL+ATNVE +F +LTEI IV+ K L
Sbjct: 123 NKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKALET 182
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N G+ ILV E P S CC
Sbjct: 183 ----SNNAIKPTGGQTILVSQSPDE-PKPSGGCC 211
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 153/215 (71%), Gaps = 9/215 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ ++V+KVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TRT+ + ++KAQI
Sbjct: 4 DESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAG ERYRA+TSAYYRGAVGA+LVYDIS+ +++ RWL+EL HAD +IV++L+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL+ R VP+E+A+ FA+ +G+ F+ETSAL++TNVE AF VL+ I V + +T G
Sbjct: 124 KRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQKKVASQQVTRG 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
S+S + P A + + CC++
Sbjct: 184 ---------SISAVTLSSPIGATDTQERKGGCCKS 209
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 154/223 (69%), Gaps = 11/223 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FK VLIGDSAVGKS +L+RF+++EF DSK TIGVEF R + + K +KAQIW
Sbjct: 8 EECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIW 67
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RA+TS+YYRGA+GA+L+YDI+RR +FD+I +WL ELR A+ V++L+GNK
Sbjct: 68 DTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNK 127
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV-------NK 184
SDL + R V ++ K A+ EGLFFLETSALE NVE AF+ ++ I +V NK
Sbjct: 128 SDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQRIASDNK 187
Query: 185 KNLTA-GEGQGNGNPASLS-GKKI--LVPGPAQEIPAKSSMCC 223
N A GNGN L GK+I + A + + SS CC
Sbjct: 188 SNGAATAHINGNGNGTVLPVGKEIVNIHEVTATQPLSSSSNCC 230
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 139/180 (77%), Gaps = 7/180 (3%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ K++KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA+LVYDIS+ +++++ +WL ELR H+D++IV++LIGNK DL R V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI-------FNIVNKKNLTAGEGQ 193
PT++A+EFA +E LFF ETSAL+ATNV+ AF+ VL + F N+T GQ
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKDAGHNVATKFTSTATSNVTTSNGQ 180
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 154/216 (71%), Gaps = 9/216 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK VLIGDSAVGKS +L+RF+R+EF LDSK TIGVEF R + + K +KAQI
Sbjct: 7 DDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+LVYDI+RR +F+++ +WL ELR ++VI+L+GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R V E+ K A+ EGL F+ETSALE NVE AF+ ++T+I + ++KNL A
Sbjct: 127 KSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKNLEAK 186
Query: 191 EGQGNGNPAS--LSGKKILVPGPAQEIPA-KSSMCC 223
+ P + GK+I+ E+ A K S CC
Sbjct: 187 LNE----PVKPLIIGKEII--HVDHEVSATKQSSCC 216
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
D++FK+VL+GDS VGKS ++ RF +NEF+ DSK+TIGVEF T+T+ I+ K VKAQIWDT
Sbjct: 7 DFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDT 66
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYR++ S+YYRGAVGA+LVYD++ R SF+H+P WL+E+ +A+K+ +I+L+GNK D
Sbjct: 67 AGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMD 126
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQ 193
L EQR V D + FA+K GL F+ETSAL+AT V+ AF +L EI+ KK L + +G
Sbjct: 127 LHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKS-QGG 185
Query: 194 GNGNPASL---SGKKILVPGPAQE 214
G PA +G+ I + A E
Sbjct: 186 GGKAPAKTGPKAGQTISLSASANE 209
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 140/209 (66%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D + KVVLIGDS VGK+ L+RF R EF SK TIGVEF T+ L I+ +K QIWDTA
Sbjct: 12 DMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKCQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA+LVYD++R SF+ IPRWL ELR HA ++V++L+GNK+DL
Sbjct: 72 GQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLVGNKTDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+QR V + +E AQ+EGL F+ETSAL+ +NVE AF V EI IV K+ L + +
Sbjct: 132 VDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLESQAAED 191
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G I + + + S CC
Sbjct: 192 EELAPMPRGISIPIAVQPTQPQQQQSRCC 220
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 153/219 (69%), Gaps = 13/219 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+V+IGDSAVGKS +L RF RNEF+ +KATIGV+F T+++ I++K + AQ WDTA
Sbjct: 8 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQCWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTS YYRGAVGAM+VYDI+ + SF ++ RWL ELR AD +I+I+++GNKSDL
Sbjct: 68 GQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF-NIVNKKNLTAGEGQ 193
+ R V T++A+ FAQ + FLETSAL ++NV AF +LT+I+ + KK + +GQ
Sbjct: 128 DSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQVVMDDGQ 187
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSSM---------CC 223
P++ SG KI P E P S+ CC
Sbjct: 188 EWLKPSTSSGHKIT---PLAETPVSSTTSTHQEKKKGCC 223
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 156/225 (69%), Gaps = 16/225 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDSAVGKS +L+RF+R+EF LDSK TIGV+F R + + K++KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+L+YDI+RR +F +I +WL ELR + V++L+GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL + R V E+ K A+ EGL+FLETSALE NVE AF++++ I ++ +K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKTAVDN 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEI----------PAKSSM--CC 223
G+GN S ++P P++EI P +S+ CC
Sbjct: 187 RPNGDGNNES---NGAVIP-PSKEIVNIHEFTATRPLSTSLPNCC 227
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 154/224 (68%), Gaps = 12/224 (5%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FK VLIGDSAVGKS +L+RF+++EF DSK TIGVEF R + + K +KAQIW
Sbjct: 8 EECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIW 67
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RA+TS+YYRGA+GA+L+YDI+RR +FD+I +WL ELR A+ V++L+GNK
Sbjct: 68 DTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNK 127
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV-------NK 184
SDL + R V ++ K A+ EGL+FLETSALE NVE AF+ ++ I +V NK
Sbjct: 128 SDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIASENK 187
Query: 185 KNLTAGEG-QGNGNPASLS-GKKIL---VPGPAQEIPAKSSMCC 223
N A GNGN L GK+I+ Q + + SS CC
Sbjct: 188 SNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 162/216 (75%), Gaps = 9/216 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDS VGKS +++RFA++EF LDSK TIGVEF R + ++ K +KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GAMLVYDI++R +F ++ +WL ELR +++V++L+GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL++ R V E+ K A+ E L F+ETSAL+ NV+ AF+ ++T+I +I+++K+L
Sbjct: 128 KSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSL--- 184
Query: 191 EGQGNGNPASL-SGKKILVPGPAQEIPA--KSSMCC 223
E + NG +L SGK+I + A E+ A ++ CC
Sbjct: 185 ETKMNGTALNLPSGKEIHI---ADEVTATKQAKYCC 217
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 156/225 (69%), Gaps = 16/225 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDSAVGKS +L+RF+R+EF LDSK TIGV+F R + + K++KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+L+YDI+RR +F +I +WL ELR + V++L+GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL + R V E+ K A+ EGL+FLETSALE NVE AF++++ I ++ +K +
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDN 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEI----------PAKSSM--CC 223
G+GN S +VP P +EI P +S+ CC
Sbjct: 187 RLNGDGNNES---NGAVVP-PGKEIVNIHEVTATRPLSTSLSNCC 227
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDSAVGKS +L+RF+R+EF LDSK TIGV+F R + + K++KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+L+YDI+RR +F +I +WL ELR + V++L+GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL + R V E+ K A+ EGL+FLETSALE NVE AF++++ I ++ +K +
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDN 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
G+GN S +VP P +EI A+S + R+
Sbjct: 187 RLNGDGNNES---NGAVVP-PGKEI-AESPISIRS 216
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 145/209 (69%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D+++K+VLIG+S VGKS +L RF RNEF + ++TIGVEF TR++ + K ++AQIWDTA
Sbjct: 6 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 65
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA++VYDI++ +F I RWL EL+ +AD IVI++IGNK+DL
Sbjct: 66 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 125
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V AKEF QK+ LFF ETSAL+ TNVE AF ++L EIF K+N +A E
Sbjct: 126 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEESS 181
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N PA + P P + CC
Sbjct: 182 NDKPAEKPDVVPIEPSPKE----NKGGCC 206
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 145/209 (69%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D+++K+VLIG+S VGKS +L RF RNEF + ++TIGVEF TR++ + K ++AQIWDTA
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA++VYDI++ +F I RWL EL+ +AD IVI++IGNK+DL
Sbjct: 67 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V AKEF QK+ LFF ETSAL+ TNVE AF ++L EIF K+N +A E
Sbjct: 127 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEESS 182
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N PA + P P + CC
Sbjct: 183 NDKPAEKPDVVPIEPSPKE----NKGGCC 207
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 156/225 (69%), Gaps = 16/225 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDSAVGKS +L+RF+R+EF LDSK TIGV+F R + + K++KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+L+YDI+RR +F +I +WL ELR + V++L+GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL + R V E+ K A+ EGL+FLETSALE NVE AF++++ I ++ +K +
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDN 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEI----------PAKSSM--CC 223
G+GN S +VP P +EI P +S+ CC
Sbjct: 187 RLNGDGNNES---NGAVVP-PGKEIVNIHEVTATRPLGTSLSNCC 227
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 153/215 (71%), Gaps = 7/215 (3%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
DP ++ +FK+VLIGDS VGK+ + +RF EF+L+SK+TIGV+F T+ +VI K VKA
Sbjct: 5 DP--QLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +F ++ RWL+ELR +A ++VI+L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLV 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
GNK DL+ R V TEDAK FA+++G+ F+ETSAL A NVE AF L I+N+V+K+ +
Sbjct: 123 GNKCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRP-S 181
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+GN P + + V P + K CC
Sbjct: 182 FNADEGNIIPTN----NLPVEEPNLKETTKKKFCC 212
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 145/204 (71%), Gaps = 8/204 (3%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIG+S VGK+ +L+RF RNEF DS+ TIGVEF TRT+ + ++KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LV+D+++ Q++ RWL+EL HA+ IV++L+GNKSDL++ R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPA 199
VPTE+A+ FA+ GL FLETSAL++TNVE AF TVL EI V+K+ + N
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQR----QSSSRTNAI 176
Query: 200 SLSGKKILVPGPAQEIPAKSSMCC 223
+L G + ++ P + CC
Sbjct: 177 TLGGAQ----AGQEQGPGEKRACC 196
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D+++K+VLIG+S VGKS +L RF RNEF + ++TIGVEF TR++ + K ++AQIWDTA
Sbjct: 31 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 90
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA++VYDI++ +F I RWL EL+ +AD IVI++IGNK+DL
Sbjct: 91 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 150
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R + AKEF QK+ LFF ETSAL+ TNVE AF ++L EIF K+N + E
Sbjct: 151 AQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASTVEETS 206
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N PA + P P + CC
Sbjct: 207 NDKPAEKPDVVAIEPSPKES----KGGCC 231
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 141/187 (75%), Gaps = 8/187 (4%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL + R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN--------LTAGE 191
VPTE+A FA+ GL FLETSAL++TNVE AF TVL EIF V+K+ +T G
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTSAITLGS 180
Query: 192 GQGNGNP 198
Q +P
Sbjct: 181 AQAGQDP 187
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FKVVL+GDS VGKS +L+RF RN F L++K+TIGVEF TR+++I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK-NIVIILIG 129
WDTAGQERYRA+T AYYRGA+G ++VYDI++ Q+F +I +WL+ELR+HAD+ NI I+L+G
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
NK+DL RAVPT++A +A + + F+ETSAL++TNVE A +LT+I+ V+ K
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTK 181
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 144/209 (68%), Gaps = 8/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D+++K+VLIG+S VGKS +L RF RNEF + ++TIGVEF TR++ + K ++AQIWDTA
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA++VYDI++ +F I RWL EL+ +AD IVI++IGNK+DL
Sbjct: 67 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V AKEF QK+ LFF ETSAL+ TNVE AF ++L EIF K+N +A E
Sbjct: 127 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEESS 182
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N P + P P + CC
Sbjct: 183 NDKPTEKPDVVPIEPSPKE----NKGGCC 207
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 159/214 (74%), Gaps = 8/214 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY+FK VLIGDS VGKS +L+RFA++EF LDSK TIGVEF R + ++ K +KAQIW
Sbjct: 10 EECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIW 69
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RA+TS+YYRGA+GA+LVYDI+RR S++ + RWL ELR + +V+IL+GNK
Sbjct: 70 DTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNK 129
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DL E R V E+AK FA+ EGL F+ETSAL+ NVE F+ ++T IF+I N+++L A
Sbjct: 130 CDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA-- 187
Query: 192 GQGNGNPASLS-GKKILVPGPAQEIPA-KSSMCC 223
+ + P +LS GK+I + A E+ A K + CC
Sbjct: 188 -KMDETPINLSNGKEIHI---ADEVTATKQAPCC 217
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 141/179 (78%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIGDS VGKS +L R+ +NEF+L+SK+TIGVEF T+++ +K++KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RAVTSA YRGAVGA+LVYDIS+ +++++ +WL+ELR AD +IVI+L+GNKSDL R
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 198
VPTE+AK FAQ+ L F+ETSA ++TNVE+AF T+L EI+ V + +G+ + P
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDDSKSSKP 179
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 148/203 (72%), Gaps = 5/203 (2%)
Query: 8 GDP-NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
GD +++ DY+FK VLIGDSAVGKS +L+RF+R+EF LDSK TIGVEF R + + K +
Sbjct: 2 GDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLI 61
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDI+RR +FD++ +WL ELR + + +V++
Sbjct: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVV 121
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L GNK DL R V E+ K A+ EGL F+ETSALE NVE AF+ ++T+I I ++K+
Sbjct: 122 LAGNKCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKS 181
Query: 187 LTAGEGQGNGNPASLSGKKILVP 209
L N +++ K + +P
Sbjct: 182 LEVRLKDAN----NITSKTVALP 200
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 153/209 (73%), Gaps = 4/209 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
++FKVVLIG S G+S +L+RF RNEF+LDSK+T G++F TR++ + K++KAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER RA TSAYYR A+GA+LV+DI++ +++++ RWL+E R HAD NIVI+L+ NKSDL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
RAVPT++A+ FA+K GL F+E+SAL TNVE AF T+LTEI+ V++K ++ + + N
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQIS--DRREN 178
Query: 196 GNPASLSGKKILVPGPAQEIPAKSSMCCR 224
S + I VP + P CC+
Sbjct: 179 DMSPSSNMVPIHVPPTTESKP--KMQCCQ 205
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 152/224 (67%), Gaps = 16/224 (7%)
Query: 11 NQKIDYVFKVVL--------IGDSAVGKSQILA----RFARNEFSLDSKATIGVEFQTRT 58
N + D++FK + S + SQI+ RF RNEF+LDSK+TIGVEF TR+
Sbjct: 3 NDEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATRS 62
Query: 59 LVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSH 118
+ + K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD +++Q+F + RWL+ELR H
Sbjct: 63 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREH 122
Query: 119 ADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
ADKNIVI+L+GNK D + R V T DA EFA + L F+ETSAL+ATNVE AF +LTEI
Sbjct: 123 ADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEI 182
Query: 179 FNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+ IV+ K L G+ + + L +K++ Q+ AK C
Sbjct: 183 YRIVSSKALE----NGSSSQSPLGDRKVIEISKTQDADAKQKCC 222
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 160/222 (72%), Gaps = 12/222 (5%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ +Y+FK+V+IGDSAVGKS +L RF RNEF+ +KATIGV+F T+++ I +K++ AQ W
Sbjct: 5 EEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RAVTS YYRGAVGAM+VYDI+ + SF ++ RWL ELR A+++I+I+++GNK
Sbjct: 65 DTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV-NKKNLTAG 190
SDLE R VPT++A+ FA+ + FLETSAL +TNV +F +LT+I+++V +KK +
Sbjct: 125 SDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVVD 184
Query: 191 EGQGNGNPASLSGKKIL-VPGPAQEIPA--------KSSMCC 223
+ Q P GKK+ + PA ++ A K S CC
Sbjct: 185 DTQNWLVPN--QGKKLTPLSDPAPQLTANTTSTHQEKKSGCC 224
>gi|359474684|ref|XP_003631513.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab11D-like
[Vitis vinifera]
Length = 151
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/137 (78%), Positives = 119/137 (86%), Gaps = 2/137 (1%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGG YG+ +QKI+YVFKVV+IGD+ VGKS RFARNEFSLDSKAT GVE QTRTLV
Sbjct: 1 MASGGSYGNSSQKINYVFKVVMIGDTEVGKSX--TRFARNEFSLDSKATTGVESQTRTLV 58
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I+ KSVKAQIWDT GQER+ AVTSAYYR AV AMLVYDI++RQSFDHIPRWLEE R HAD
Sbjct: 59 IRRKSVKAQIWDTTGQERHGAVTSAYYRSAVDAMLVYDITKRQSFDHIPRWLEESRGHAD 118
Query: 121 KNIVIILIGNKSDLEEQ 137
K I+IILIGNK+DL+E
Sbjct: 119 KTILIILIGNKTDLKEH 135
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 135/170 (79%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ +++K +KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
RAVPT++AK FA + + F ETSAL + NV+ AF ++ IF +V+K
Sbjct: 128 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK 177
>gi|218201822|gb|EEC84249.1| hypothetical protein OsI_30694 [Oryza sativa Indica Group]
Length = 214
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/145 (73%), Positives = 120/145 (82%), Gaps = 1/145 (0%)
Query: 79 YRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQR 138
YRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HADKNIVI+LIGNKSDL R
Sbjct: 68 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLR 127
Query: 139 AVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG-QGNGN 197
VPTEDAKEFA++E LFF+ETSALE+TNVENAFMTVLTEI+ IV+KKNL A E +GN
Sbjct: 128 VVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGN 187
Query: 198 PASLSGKKILVPGPAQEIPAKSSMC 222
+ L G KI+VPG P K+S C
Sbjct: 188 SSLLKGTKIVVPGQEPAPPTKASCC 212
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 138/188 (73%), Gaps = 15/188 (7%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
+ + DY+FK+VLIGDS VGKS IL+RF RNEFS++SK+TIGVEF TR++ I+ K VKA
Sbjct: 3 NEHDDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRR---------------QSFDHIPRWLE 113
QIWDTAGQERYRA+TSAYYRGAVGA+LVYD++++ ++F + +WL
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWLA 122
Query: 114 ELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMT 173
ELR HAD IVI+L GNK DL+ R+V T+DA+ +A KE L FLETSAL + N++ AF
Sbjct: 123 ELRDHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQK 182
Query: 174 VLTEIFNI 181
VL+ I +
Sbjct: 183 VLSVIHEV 190
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P + DY+FK+V+IGDS VGK+ IL+RF ++EFS++SK TIGVEF T+T++ +K +KAQ
Sbjct: 4 PEEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKAQ 63
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQE+YRA+T+AYYRGAVGA+ ++DI+++ +FD++ +WL EL+ +AD NIVI+L+G
Sbjct: 64 IWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLVG 123
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
NK DL E RAV TEDA FA++ L ++ETSAL++TNV+ AF V T F+I+
Sbjct: 124 NKCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRV-TRDFSIL 175
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 2/217 (0%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA +T ++A + F TEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQI 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
E N + I VP CC+
Sbjct: 182 --AERSANDESPGNNVVDISVPPTTDGQRGSKLQCCQ 216
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 132/155 (85%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VLIG+S VGK+ +L+RF RNEF+ DS+ TIGVEF TRT+++ +VKAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TSAYYRGAVGA++V+DI++ Q++D + RWL+EL HA+ +IV++L+GNKSDL ++R V
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVL 175
PTE+AK FA+ +GL F+ETSAL++TNVE AF TVL
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 137/183 (74%), Gaps = 6/183 (3%)
Query: 42 FSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISR 101
SL+SK+TIGVEF TR++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++R
Sbjct: 1 MSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR 60
Query: 102 RQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSA 161
+F+++ RW+ EL+ H D NIVI+L+GNK+DL RAV TEDAK FA+KE FF+ETSA
Sbjct: 61 HVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSA 120
Query: 162 LEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPAS-LSGKKILVPGPAQEIPAKSS 220
LE+ NVENAF VLT+I+++V+KK L G+ +PA+ G+ I V G K S
Sbjct: 121 LESMNVENAFTEVLTQIYHVVSKKALDIGD-----DPAAPPKGQTINVGGKDDVSAVKKS 175
Query: 221 MCC 223
CC
Sbjct: 176 ACC 178
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 143/178 (80%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P Q+ ++FK+VLIGDS+VGKS IL+RF + +F+ DS+ TIGVEF TR+L K ++AQ
Sbjct: 5 PQQEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDT GQERY+++TSAYYRGAVGAML+YDI+++++F++I +W++EL+ +A+ N+V +LIG
Sbjct: 65 IWDTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
NK+DL+ QR VP++ A +FA+ + F+E SA + TNV+ AF ++ EI+ ++NK++L
Sbjct: 125 NKADLKAQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSL 182
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 154/207 (74%), Gaps = 4/207 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDS VGKS +L+RFA++EF LDSK TIGVEF R + ++ K +KAQI
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+LVYDI+RR S++ + RWL ELR + +V+IL+GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 127
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL E R V E+AK FA+ EGL F+ETSAL+ NVE F+ ++T IF+I N+++L A
Sbjct: 128 KCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 187
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPA 217
+ N S +GK+I + A E+ A
Sbjct: 188 MDETPINHLS-NGKEIHI---ADEVTA 210
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 133/173 (76%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D + DY+FK+VL+GDS VGKS +L RF +NEF + + TIGVEF T+++ I+ + VKA
Sbjct: 5 DNSNFYDYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKA 64
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+T AYYR AVGA+L+YDI+ RQSF+++ +W EL +H++ N V+IL+
Sbjct: 65 QIWDTAGQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILV 124
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNI 181
GNK DL +QRA+ E+A++FAQ + F+ETSAL A NV AF ++TEIF I
Sbjct: 125 GNKCDLSDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI 177
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 134/177 (75%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ DY+FK+VLIGDS VGK+ IL RF NEF L+SK TIGVEF T+T Q KSVK QI
Sbjct: 6 DEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+T+AYYRGAVGA + YDI+R +F + +WL EL+ HAD NIVII+IGN
Sbjct: 66 WDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
K D + RAV T++A+++ + + + F+ETSAL+ TN++ AF ++ IFN + KN+
Sbjct: 126 KIDAVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNI 182
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 149/214 (69%), Gaps = 7/214 (3%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ D++FK+VLIGDS VGK+ IL RF N+F L+SK TIGVEF T+TL KSVK QI
Sbjct: 6 DEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+T+AYYRGAVGA + YD++R +F + +WL EL+ HAD NIVII+IGN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+D +QRAV T++A F +++ + F+ETSAL+ TN++ AF ++ IF+ + K TA
Sbjct: 126 KTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSK--TAK 183
Query: 191 E-GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ Q +P LS +K P + S CC
Sbjct: 184 KVVQVETDPVVLSEQKT----PQSKSKKSSEGCC 213
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 135/171 (78%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL GDS VGKS +L RF +N+F+ DSK TIGVEF TR++ I K +KAQIWDTA
Sbjct: 9 DYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGA+GA+LVYDI+ +QSF+ + RW++E+R +ADK+IVI++IGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMIIGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+ RA+ TE ++ AQ + F+E SA + TNV+ AF ++ +I+ + K+
Sbjct: 129 KHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLTKQ 179
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 143/193 (74%), Gaps = 9/193 (4%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ ++KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G E YR T YYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL
Sbjct: 70 GLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN-------- 186
+ R VPT++A+ FA+ GL FLETSAL++TNVE AF TVL EIF V+K+
Sbjct: 129 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRSIP 188
Query: 187 LTAGEGQGNGNPA 199
+T G Q +P+
Sbjct: 189 ITLGNAQAGQDPS 201
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 129/155 (83%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSAL 162
+GNKSDL RAVPT++A+ FA+K L F+ +L
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIRDLSL 156
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDTA 74
Y FK+VL+GDS VGKS ++ RF +NEF+ DSK+TIGVEF T+T+ I+ K VKAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYR++ S+YYRGAVGA+LVYD++ R SF+H+P WL+E+ +A+K+ +I+L+GNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
EQR V D + FA+K GL F+ETSAL+AT V+ AF +L EI+ KK
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 133/164 (81%), Gaps = 1/164 (0%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
+VLIGDS VGKS +L R+ + EF+L+SK+TIGVEF T+T+ +K++KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RAVTSAYYRGAVGA+LVYD+S+ +++ + +WL+ELR AD IVI+L+GNKSDL R
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF-NIV 182
VPTE+AK FAQ+ L F+ETSA +TNVE AF T+L EI+ N+V
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVV 164
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 141/190 (74%), Gaps = 5/190 (2%)
Query: 36 RFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDTAGQERYRAVTSAYYRGAVGAM 94
RF R+EF+L+SK+TIGVEF T+++ +++ K +KAQIWDTAGQERYRA+TSAYYRGAVGA+
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 95 LVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGL 154
LVYDI+++ +F++I +WL+ELR +AD NIVI+L+GNKSDL+ R + DA +FA+KE L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 155 FFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQE 214
F+ETSALEATNVE AF +L EI+N+ KK T E N P GKKI V E
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNVNIQP---RGKKINVDDDNDE 192
Query: 215 IPAK-SSMCC 223
K + CC
Sbjct: 193 NEKKPKTKCC 202
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 129/156 (82%)
Query: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERY 79
VVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++ +VKAQIWDTAG ERY
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 80 RAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRA 139
RA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+GNKSDL + R
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 152
Query: 140 VPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVL 175
VPT++A+ FA+ GL FLETSAL++TNVE AF TVL
Sbjct: 153 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 146/209 (69%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D+++K+VL+G+S VGKS +L RF RNEF D ++TIGVEF TR++V K+++AQIWDTA
Sbjct: 10 DFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNIRAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGA+GA++VYDI+++ SF+ + RWL EL +AD+ ++ ++IGNKSDL
Sbjct: 70 GQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQMIIGNKSDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V TE+ K+ A+ FF ETSAL+ NVE+AFMT+L +I++ K + E +
Sbjct: 130 NQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIYDESAK--VVVDEVKT 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P + +++ + K CC
Sbjct: 188 EAKP---TADTVVLTHEEPKATEKQQKCC 213
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 130/161 (80%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+ KVVLIGDS VGKS +L+RFA+NEF+L+SK TIGVEF T+T+ K +KAQIWDTA
Sbjct: 10 DYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKAQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAV A LVYDI++ +F ++ +WL+EL+ +AD NIV++L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLVGNKTDL 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVL 175
RAV EDA+ +A+K L F+ETSAL++TNV AF ++
Sbjct: 130 NNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQII 170
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 146/189 (77%), Gaps = 3/189 (1%)
Query: 10 PN---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
PN + DY+ KVVL GDS VGK+ +L+RF RNEFSL+S++TIGVEF TR++ I K++
Sbjct: 21 PNYSEDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTL 80
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQ+RYRA+T+AYYR AVG + VYDI++R +FD++ +WL+E R+ D +++++
Sbjct: 81 KAQIWDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILM 140
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNK+DL RAV +++A+ +A+K + ++ETSAL+ T+V+ AF ++L EI++ +++K
Sbjct: 141 LVGNKTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKG 200
Query: 187 LTAGEGQGN 195
L G N
Sbjct: 201 LKDDTGGFN 209
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 164/217 (75%), Gaps = 11/217 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FK VLIGDS VGKS +++RFA++EF LDSK TIGVEF R + ++ K +KAQI
Sbjct: 7 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+G MLVYDI+RR +F ++ +WL ELR ++++V++L+ N
Sbjct: 67 WDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVAN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL + R V E+ +EFA+ EGL F+ETSAL+ NVE AF+ ++T+I +I+++K+L
Sbjct: 127 KSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQKSL--- 183
Query: 191 EGQGNGNPASLS---GKKILVPGPAQEIPA-KSSMCC 223
E + NG P +LS GK+I V A E+ A K + CC
Sbjct: 184 ETKMNG-PTTLSVPIGKEIQV---ADEVTATKQANCC 216
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS-VKAQI 70
+ DY+FK+VLIGD+ VGKS +L R+ +N+F ++S++TIGVEF TR L + VKAQI
Sbjct: 10 ENYDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQI 69
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+T+AYYR AVGA++VYDIS+ SF++I +W++ELR HAD NI I LIGN
Sbjct: 70 WDTAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGN 129
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
KSDL+ RAV EDA++ AQ + F+ETSAL + NV+ AFM ++ EI+ +
Sbjct: 130 KSDLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRLT 181
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 131/172 (76%), Gaps = 3/172 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
++K+V+IG+S VGKS +L RF RNEF + K TIGVEF TRT+ + K+++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
E+YRA+T AYYRGA GAM VYD+S++ SFD I RW+ EL++ D +I I+++GNK+DL++
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
+R V T D EFAQK FF+ETSALE TNVE AF +L +I+ KKN T
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIY---KKKNAT 176
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/167 (59%), Positives = 130/167 (77%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P +D + + IG + +RF RNEF+LDSK+TIGVEF TR++ + K++KAQ
Sbjct: 12 PPLPLDIAAQSLTIGALPPVTVPLQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 71
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+G
Sbjct: 72 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 131
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
NKSDL RAVPT++AK FA + L F+ETSAL+A+NVE AF +LT
Sbjct: 132 NKSDLRHLRAVPTDEAKSFASENHLSFIETSALDASNVELAFQNILT 178
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 140/205 (68%), Gaps = 32/205 (15%)
Query: 19 KVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQER 78
++VLIGDS VGKS +L+RF RNEF+LDSK+TIGVEF TR++ + K++K+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 79 YRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQR 138
YRA+TSAYYRGAVGA+LVYDIS+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL R
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 139 AVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNP 198
AVPTE+AK+FA+ IF IV+ K L +G+ N
Sbjct: 151 AVPTEEAKQFAK---------------------------IFRIVSSKALDSGDSAQN--- 180
Query: 199 ASLSGKKILVPGPAQEIPAKSSMCC 223
LS +K++ Q+ P CC
Sbjct: 181 -PLSDRKVVEITKTQD-PESKQGCC 203
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/184 (57%), Positives = 139/184 (75%), Gaps = 13/184 (7%)
Query: 33 ILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDTAGQERYRAVTSAYYRGAV 91
+L+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 92 GAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQK 151
GA+LVYDI++RQSF+++ RWL+ELR HAD NIVI+L+GNKSDL+ RAV E+A +FA +
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 152 EGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGP 211
E L F+ETSAL+ATNVE AF +L EI+ + KK + NP S + PG
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQI-------EDNPQSTTQ-----PGR 168
Query: 212 AQEI 215
Q+I
Sbjct: 169 GQKI 172
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 124/144 (86%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQK 151
+GNKSDL RAVPT++A+ FA+K
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEK 145
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+V+IGDSAVGKS +L RF RNEF+ +KATIGV+F T+++ I+ K + AQ WDTA
Sbjct: 7 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQCWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVTS YYRGA+GAM+VYDI+ + SF ++ RWL ELR A+ +I+++++GNKSDL
Sbjct: 67 GQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGNKSDL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEG 192
E R V T +A+ FA+ + FLETSAL +TNV +F +LT+I+N +K + +G
Sbjct: 127 ESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVVMDDG 186
Query: 193 QGNGNPASLSGKKILVPGPAQEIP 216
Q P SG+KI P E P
Sbjct: 187 QEWLKPTQ-SGQKIT---PLNEAP 206
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 141/184 (76%), Gaps = 6/184 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FK+VLIGDS VGKS +L R+ +N+F ++S++TIGVEF TR++ ++ + V+AQIWDTA
Sbjct: 12 DHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYR AVGA+LVYDI++ ++ +I RW+ ELR HA+ +I ++L+GNKSDL
Sbjct: 72 GQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ QRAV E+A +A+ + F+ETSAL+ATNVE AF+ V+ +I+ K EGQ
Sbjct: 132 KSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQTQIK------EGQD 185
Query: 195 NGNP 198
+ N
Sbjct: 186 DNNQ 189
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 124/144 (86%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQK 151
+GNKSDL RAVPT++A+ FA+K
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEK 145
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV-KAQIWDT 73
DY+FKVV+IGDS VGKS +L R+ + +F+++SK TIGVEF T+++ Q K V KAQIWDT
Sbjct: 11 DYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDKKVVKAQIWDT 70
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+T+AYYRGAVGA+LVYD++ SF H+ WL+EL+ +AD NIVI+L+GNK+D
Sbjct: 71 AGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNIVILLVGNKTD 130
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
L+++R V E+A +A + L F+ETSAL+ +NV+ AF ++ EI+ ++
Sbjct: 131 LKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVI 179
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 3/172 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
++K+V+IG+S VGKS +L RF RNEF + K TIGVEF TRT+ + K+++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
E+YRA+T AYYRGA GAM VYD+S++ SFD I RW+ EL++ D +I I+++GNK+DL++
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
+R V T D EFAQK FF+ETSAL+ TNVE AF +L +I+ KKN T
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY---KKKNAT 176
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 3/172 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
++K+V+IG+S VGKS +L RF RNEF + K TIGVEF TRT+ + K+++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
E+YRA+T AYYRGA GAM VYD+S++ SFD I RW+ EL++ D +I I+++GNK+DL++
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
+R V T D EFAQK FF+ETSAL+ TNVE AF +L +I+ KKN T
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY---KKKNAT 176
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 144/209 (68%), Gaps = 2/209 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY++KVV+IGDS VGKS +L RF R+EF + K+TIGVEF ++ + ++V+ QIWDTA
Sbjct: 7 DYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGA+GA+LVYD++++ SF+ + RWL ELR +ADK +V +++GNK DL
Sbjct: 67 GQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E+ R V ++ ++ A+K G FF ETSA + NVE AFM ++ +I + + L A E +
Sbjct: 127 EQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKICD--EQTRLRASETKP 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P S S +I Q+ P KS C
Sbjct: 185 VIKPISDSKVEIDKTPEEQQTPKKSGCAC 213
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 144/209 (68%), Gaps = 2/209 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY++KVV+IGDS VGKS +L RF R+EF + K+TIGVEF ++ + ++V+ QIWDTA
Sbjct: 7 DYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGA+GA+LVYD++++ SF+ + RWL ELR +ADK +V +++GNK DL
Sbjct: 67 GQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E+ R V ++ ++ A+K G FF ETSAL+ NVE AFM ++ +I + + L A E +
Sbjct: 127 EQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKICD--EQTRLRASETKP 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P S S I Q+ P K+ C
Sbjct: 185 VIKPISDSKVDIDKTPEEQQTPKKNGCAC 213
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 141/209 (67%), Gaps = 7/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY++K+VLIG+S VGKS +L RF RNEF + ++TIGVEF TR++ + K ++AQIWDTA
Sbjct: 7 DYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQIWDTA 66
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA++VYDI++ SF I RWL EL+ +AD IV++++GNK+DL
Sbjct: 67 GQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVGNKADL 126
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V AK F + + LFF ETSAL+ TNVE AF +L EI+ K+N++ +
Sbjct: 127 SQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIY----KQNVSNLDENA 182
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P K +VP S CC
Sbjct: 183 QKVPQE---KPDIVPIEPVLPNGDKSKCC 208
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 3/172 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
++K+V+IG+S VGKS +L RF RNEF + K TIGVEF TRT+ + K+++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
E+YRA+T AYYRGA GAM VYD+S++ SFD I RW+ EL++ D +I I+++GNK+DL++
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKADLKQ 127
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
+R V T D EFAQK FF+ETSAL+ TNVE AF +L +I+ KKN T
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY---KKKNAT 176
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 124/144 (86%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQK 151
+GNKSDL RAVPT++A+ FA++
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEQ 145
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 135/173 (78%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ D+++K+VL+G+S VGKS +L RF RNEF D ++TIGVEF TR++ K+++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+T+AYYRGA+GA++VYDI+++ SF+ + +WL EL +ADK +V ++IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
DL + R V T + +E A+K FF ETSAL+ +NVE AFMT+L +I++ +K
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 135/173 (78%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ D+++K+VL+G+S VGKS +L RF RNEF D ++TIGVEF TR++ K+++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+T+AYYRGA+GA++VYDI+++ SF+ + +WL EL +ADK +V ++IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
DL + R V T + +E A+K FF ETSAL+ +NVE AFMT+L +I++ +K
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/149 (62%), Positives = 126/149 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RN+F+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFF 156
GNKSDL RAVPT++A+ FA+K + +
Sbjct: 122 AGNKSDLRHLRAVPTDEARAFAEKNTILY 150
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 135/173 (78%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ D+++K+VL+G+S VGKS +L RF RNEF D ++TIGVEF TR++ K+++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+T+AYYRGA+GA++VYDI+++ SF+ + +WL EL +ADK +V ++IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
DL + R V T + +E A+K FF ETSAL+ +NVE AFMT+L +I++ +K
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 151/213 (70%), Gaps = 5/213 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ I +FK+VLIGDS VGK+ + +RF +EF+L+SK+TIGV+F T+ + I K VKAQI
Sbjct: 5 DSNIGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDIS+ +F ++ +WLEEL+ +A +++I+LIGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL+ R V TEDA +A+++G+ F+ETSAL++ NVE AF + +I+ +++ K+ +
Sbjct: 125 KCDLKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLIS-KHPSFN 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N P + + + P + AK CC
Sbjct: 184 MNETNIIPTN----NLPIQEPNIKQSAKRKFCC 212
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL-VIQHKSVKAQIWDT 73
DY+FK+V++GDS VGKS +L R+ +NEF+++S T+G+EF T+T+ Q++ ++AQIWDT
Sbjct: 6 DYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQIWDT 65
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
GQERYR++TSAYYRGAVGA++VYD++ ++SFD++ WL+ELR A+ NIV++L+GNK D
Sbjct: 66 CGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVGNKID 125
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
L+++R V EDA +FAQ++G+ F+ETSALE +NV+ AF ++ EI +V
Sbjct: 126 LKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVV 174
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/161 (60%), Positives = 129/161 (80%), Gaps = 5/161 (3%)
Query: 41 EFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDIS 100
+FSL+SK+TIGVEF TR++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++
Sbjct: 15 KFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 74
Query: 101 RRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETS 160
R +F+++ RWL+ELR H D +IVI+L+GNK DL RAV +DAK FA++E FF+ETS
Sbjct: 75 RHVTFENVERWLKELRDHTDSHIVIMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETS 134
Query: 161 ALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGNGNPASL 201
ALE+ NVENAF VLT+I+ +V++K L G+ +PA+L
Sbjct: 135 ALESMNVENAFTEVLTQIYQVVSRKALDIGD-----DPAAL 170
>gi|224105831|ref|XP_002333760.1| predicted protein [Populus trichocarpa]
gi|222838434|gb|EEE76799.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 119/150 (79%)
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
Q RYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ +WLEELR HAD NIVI+LIGNKSDL
Sbjct: 1 QFRYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGNKSDLG 60
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
RAVPTEDAKEFAQKE LFF+ETSALEATNVE+AF++VLTEI+ +++KK L A E +
Sbjct: 61 TLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIANEQESG 120
Query: 196 GNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
G+ + L G I+VP +S CC T
Sbjct: 121 GSSSLLKGTNIVVPEQEPVSGGRSFSCCGT 150
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 127/157 (80%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VL GDS VGKS +L RF +N+F+ DSK TIGVEF TR++ I K VKAQIWDTA
Sbjct: 9 DYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGA+GA+LVYDI+ +QSF+ + +W++E+R +ADK+IVI++IGNKSDL
Sbjct: 69 GQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMIIGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAF 171
+ RA+ TE ++ AQ + F+E SA + TNV+ AF
Sbjct: 129 KHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAF 165
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 138/193 (71%), Gaps = 4/193 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N+ DY+FKV+ GDS+VGKS I++R RN FS K T+GVEF T+ + K++ AQI
Sbjct: 6 NEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTIAAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDT G ERY + T + YRG GA+LVYDI+RR++F+++ +WL+ELR HA+ N VI+LIGN
Sbjct: 66 WDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIMLIGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ R+V TEDA++FA+KEGL F+ETSA ++TNV+ A +L EI + ++K L +
Sbjct: 126 KSDLQHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKELHSE 185
Query: 191 EGQG----NGNPA 199
E G +G P
Sbjct: 186 ESNGVSTQDGKPT 198
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQI 70
++ D++FK+VLIGDS VGKS +L+RF +NEF+L+SKATIGVEF T++ +++ +SVK QI
Sbjct: 8 EEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQI 67
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+T+ YYRGAVGA+LVYDI++ ++F+ + RWL+EL +A+ IVI+L+GN
Sbjct: 68 WDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGIVILLVGN 127
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL + R V E+A EFA + L F+ETSAL ++NV+ AF ++ +I + + +
Sbjct: 128 KTDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEASSRLIVPD 187
Query: 191 EGQGNGNPASLS 202
+ + N N S S
Sbjct: 188 KDEQNKNQRSKS 199
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 127/163 (77%), Gaps = 2/163 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
++V+KVVLIG+S VGKS +L+RF +NEF+ DS+ TIGVEF TRT+ + +VKAQIWDTA
Sbjct: 8 NFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G ERYRA+TSAYYRGAVGA+LVYDIS+ +++ RWL+EL HAD +IV++L+GNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGNKRDL 127
Query: 135 EEQRAVPTEDAKEFAQKE--GLFFLETSALEATNVENAFMTVL 175
E R VP+E + E GL F+ETSAL++TNVE AF VL
Sbjct: 128 ENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 130/177 (73%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
++ DY+FK VL GDS VGKS +L+RF++NEF DS+ TIGVEF R + + K VK QI
Sbjct: 6 DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+RA+TS+YYRGA+GA+LVYDI+R +FD+I +WL ELR + +VIIL+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
K DL + R V E+A+ A+ E LFF+ETSA + NVE AF+ ++ I I ++K L
Sbjct: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 152/217 (70%), Gaps = 22/217 (10%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+ AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEA------------------AFQTILTEIYRIVSQKQM 163
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 164 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 196
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 127/161 (78%)
Query: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQE 77
F VVLIGDS VGK+ IL+RFA +EF+LDSKAT+GVEF + + + + +KAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 78 RYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQ 137
RYR++TSAYYRGAVGA++VYDI+ R SF+++ WL ELR H+D ++V++LIGNK DL Q
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 138 RAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
R++ T++A+ +A+K + F+ETSA E T ++ AF VL +
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 159/217 (73%), Gaps = 11/217 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL-VIQHKSVKAQ 69
++ DY+FKV IG+S VGKS +++RFA++EF LDSK +IGVEF + +++ K +KAQ
Sbjct: 8 DEHCDYLFKVX-IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQ 66
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQER+RA+TS+YYRGA+GAMLVYDI++R +F ++ +WL ELR +++V++L+
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVR 126
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL++ R V E K FA+ EGL F+ETSAL+ NV+ AF ++T+I +I+++K+L
Sbjct: 127 NKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSL-- 184
Query: 190 GEGQGNGNPASL-SGKKILVPGPAQEIPA--KSSMCC 223
E + NG +L SGK+I + A E+ A ++ CC
Sbjct: 185 -ETKMNGAALNLPSGKEIHI---ADEVTATKQAKYCC 217
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 136/170 (80%), Gaps = 2/170 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK+VLIG+ VGKS +L+RF RNEF+L SK TIGVEF T+ + ++ K+VK QIWDTAG
Sbjct: 7 YLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAG 66
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
ER+R S+YYRGA+GA+LVYDIS+ ++++ + +WL+ LR HA+++IVI L+GNKSDL
Sbjct: 67 MERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL- 125
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
AVPT++AK +A++ + F+ETSAL+ TNVE AF ++TEI+ +V++K
Sbjct: 126 -SHAVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKA 68
+ DY+FK+VLIGDS VGKS +L RF + F LDSK+TIGVEF T+ + +++ K KA
Sbjct: 3 ADHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGA GA++VYDI+ RQSF + RWL EL + D N+VI+L
Sbjct: 63 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLA 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
GNKSDL R V TEDA+ FA+ L F ETS L + NVE AF +L+ I
Sbjct: 123 GNKSDLVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
+P ++ DY+F VLIGD+ VGK+ IL R+A+NEF D+K+T+GVEF ++ + I +K++K
Sbjct: 4 AEPEERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI+ R +FD+I WL EL ++D ++ I+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMTIVL 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
+GNK DL R + +++A +FA++ + F+ETSA ++T ++ AF T+L+ I+ +
Sbjct: 122 VGNKCDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 132/166 (79%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FK+VLIGDS VGKS +++RF +++FS++ + TIGVEF T+T+ I K +KAQIWDTA
Sbjct: 11 DFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGA GA++V+DI+++ SF+++ +W +EL+ H+D IV +LIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+QR + + A +FAQ+ + +LETSAL +TNVE AF ++ I++
Sbjct: 131 ADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIYD 176
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKA 68
+Q DY+FK+VLIGDS VGKS +L RF + F LDSK+TIGVEF T+T+ + + K KA
Sbjct: 3 ADQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+ + SF ++ +WL EL +AD NI I L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLV 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
GNKSDL R V ED + FA++ L F ETS L + NV+ AF +L++I
Sbjct: 123 GNKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 145/218 (66%), Gaps = 16/218 (7%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FK++LIGDS VGK+ IL RF +NEF LDSK TIGVEF T+T+ +++KSVK QIWDTA
Sbjct: 10 DFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQIWDTA 69
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T+AYYRGAVGA + YDI+R +F +I +WL E++ +A KNIVI++IGNK D
Sbjct: 70 GQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGNKIDQ 129
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R V + +A + Q+ + ++ETSA NVE AF +++EIF+ ++ K
Sbjct: 130 ANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSKQ-------- 181
Query: 195 NGNPASLSGKKILVPG--PAQEIPAKSSM------CCR 224
N L G + + P++ I K++ CC+
Sbjct: 182 QKNVKQLQGDNLTLDDDLPSKSITKKTNCRKEKENCCQ 219
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 118/142 (83%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
++ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K +KAQ
Sbjct: 6 ADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVLKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQK 151
NK+DL RAV TE+ FA++
Sbjct: 126 NKADLRHLRAVSTEETTNFAER 147
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 118/136 (86%)
Query: 41 EFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDIS 100
+F+LDSK+TIGVEF TR++ + K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDIS
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 101 RRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETS 160
+ Q+++++ RWL+ELR HAD NIVI+L+GNKSDL RAVPTE+AK+FA + L F+ETS
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETS 125
Query: 161 ALEATNVENAFMTVLT 176
AL+A+NVE AF +LT
Sbjct: 126 ALDASNVELAFQNILT 141
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 118/142 (83%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
+ F VVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++KAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+GNKSDL
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 136 EQRAVPTEDAKEFAQKEGLFFL 157
RAVPT++AK FA + F
Sbjct: 121 HLRAVPTDEAKAFAGRTNSFLF 142
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D++FK+VLIGDS VGKS +L+RF +++F D K TIGVEF TR+++ +K +KAQIWDTA
Sbjct: 11 DFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERY+++T+AYYRGAVGA+L+YDI++ SF +I +WL E+R HA+ +IVI+L+GNKSDL
Sbjct: 71 GQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
+ R V E+A FA+ + F+E SAL+++NVE +F ++T
Sbjct: 131 KHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLIT 172
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 133/183 (72%), Gaps = 6/183 (3%)
Query: 45 DSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQS 104
+SK+TIGVEF TR++ + K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +
Sbjct: 14 ESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLT 73
Query: 105 FDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEA 164
++++ RWL+ELR HAD NIVI+L+GNKSDL RAVPT++A+ FA+K L F+ETSA+++
Sbjct: 74 YENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSAMDS 133
Query: 165 TNVENAFMTVLTEIFNIVNKKNLT--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
TNVE AF +LTEI+ IV++K + A + GN I VP C
Sbjct: 134 TNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVV----DISVPPTTDGQRPNKLQC 189
Query: 223 CRT 225
C++
Sbjct: 190 CQS 192
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 138/217 (63%), Gaps = 17/217 (7%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R HA+ N+ I+LIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKK-N 186
+RAV TE+ ++FA++ GL FLETSA A NVE AF+ EI F++ N+
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G G GN P ++ P + AKSS CC
Sbjct: 185 IKVGYGAGNAGPQTVK--------PGEGGAAKSSSCC 213
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 140/209 (66%), Gaps = 2/209 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D ++K V++GDS GK+ +L RF RNEF + K+TIGVEF ++ + + +V+ QIWDTA
Sbjct: 5 DVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIWDTA 64
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+T AYYRG++GA++VYD++++ SF+ + RW EL + DK++V ++IGNK DL
Sbjct: 65 GQERYRAITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIGNKCDL 124
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
E+ R V TE+A+EFA+K G +F ETSA++ TNVE AFM ++ I + +K A E +
Sbjct: 125 EQMREVTTEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMIETICDRQFEKK--AAEAKP 182
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P I P QE P K CC
Sbjct: 183 AQKPFLEERVVIEDPQVPQEPPKKKFQCC 211
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 138/217 (63%), Gaps = 17/217 (7%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R HA+ N+ I+LIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKK-N 186
+RAV TE+ ++FA++ GL FLETSA A NVE AF+ EI F++ N+
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G G GN P ++ P + AKSS CC
Sbjct: 185 IKVGYGGGNAGPQTVK--------PGEGGAAKSSSCC 213
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKA 68
+Q DY+FK+VLIGDS VGKS +L RF + F LDSK+TIGVEF T+ + + + K KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+ + SF + +WL EL +AD NI I L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLV 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
GNKSDL R V ED + FA + L F ETS L + NV+ AF +L++I
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI 172
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 12/209 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D ++K+VLIGDS VGK+ IL +F R EF DSK TIGVEF ++ ++I K+VKAQIWDTA
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGAM++YDI++ +F+++ +W++EL+ +AD ++ I+++GNK+D
Sbjct: 69 GQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQ 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V T+ A +AQ+ G+ F+ETSA + TNVE+AF +L +I+ +A +
Sbjct: 129 KHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK-------SAKVVKP 181
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P K +V P KSS CC
Sbjct: 182 TPQPT-----KFVVADTDVVKPEKSSGCC 205
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 130/191 (68%), Gaps = 1/191 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQI 70
DY+FK+VLIGDS VGKS +L RF + F LDSK+TIGVEF T+ + +++ K+ KAQI
Sbjct: 5 HNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQI 64
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGA GA++VYDI+ +QSF ++ RWL EL + D N++I L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVGN 124
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R V +ED + +A L F ETS L N++ AF +L+ I K TA
Sbjct: 125 KSDLTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSICENHEKFGDTAH 184
Query: 191 EGQGNGNPASL 201
Q N P ++
Sbjct: 185 GEQTNQIPKAV 195
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQ 69
+Q DY+FK+VLIGDS VGKS +L RF + F LDSK+TIGVEF T+ + +++ K KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA GA++VYDI+ +QSF ++ RWL EL + D N++I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL R V ED + +A+ L F ETS L N++ F TE+ N++ +
Sbjct: 124 NKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTF----TELLNLICDNHEKF 179
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ N A+++ K ++ +++ K + CC
Sbjct: 180 GDTSVTANGANVT-KSLVSLAKPKKMKKKMAKCC 212
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKA 68
+Q DY+FK+VLIGDS VGKS +L RF + F LDSK+TIGVEF T+ +V+ + K KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKA 62
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+ + SF + +WL EL +AD NI I L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLV 122
Query: 129 GNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
GNKSDL R V ED + FA + L F ETS L + NV+ AF +L+ I
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRI 172
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 144/209 (68%), Gaps = 12/209 (5%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D ++K+VLIGDS VGK+ IL +F R EF DSK TIGVEF ++ +++ K++KAQIWDTA
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGAM++YDI++ +F+++ +W++EL+ +AD ++ I+++GNK+D
Sbjct: 69 GQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQ 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ R V T+ A +AQ+ G+ F+ETSA + TNVE+AF +L +I+ +A +
Sbjct: 129 KHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK-------SAKVVKP 181
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P K +V P KSS CC
Sbjct: 182 TPQPT-----KFVVADTDVVKPEKSSGCC 205
>gi|429327079|gb|AFZ78868.1| Rab GTPase-like protein [Coptotermes formosanus]
Length = 212
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 138/199 (69%), Gaps = 3/199 (1%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
+ DY+FK+V++GDS VG++ +L +F + F S++TIGVEF+ +T+ + KSVK QIWD
Sbjct: 5 EFDYIFKIVIVGDSGVGRTNLLLQFVQGVFIPQSRSTIGVEFRVKTVEVNGKSVKIQIWD 64
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRA+T YYRGAV A+L+YDI+ S++ + +W++EL+ HAD N++++LIGNK
Sbjct: 65 TAGQERYRAITKNYYRGAVVALLLYDITSSSSYNSLQKWIDELKMHADGNVIVMLIGNKC 124
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DL QR V DA+ A F ETSA EATNV+ AFM ++ E +VN+ + + G+G
Sbjct: 125 DLSGQRTVLEADAQNLANDNSFLFFETSAKEATNVKEAFMALVRE---LVNQNSRSRGDG 181
Query: 193 QGNGNPASLSGKKILVPGP 211
+ N N + +G + + P
Sbjct: 182 ESNHNQSVKTGAGVSIDEP 200
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 133/169 (78%), Gaps = 2/169 (1%)
Query: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
+ VVLIG+ VGKS +L+RF RNEF+L SK TIGVEF T+ + ++ K+VK QIWDTAG
Sbjct: 22 IISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGM 81
Query: 77 ERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEE 136
ER+R S+YYRGA+GA+LVYDIS+ ++++ + +WL+ LR HA+++IVI L+GNKSDL
Sbjct: 82 ERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL-- 139
Query: 137 QRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
AVPT++AK +A++ + F+ETSAL+ TNVE AF ++TEI+ +V++K
Sbjct: 140 SHAVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 188
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 120/142 (84%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + D++FKVVLIGDS VGKS +L+RF RN+F+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMP 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFA 149
NKSDL RAVPT++A+ FA
Sbjct: 122 ADNKSDLRHLRAVPTDEARAFA 143
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2 homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 136/217 (62%), Gaps = 17/217 (7%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R HA+ N+ I+LIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKK-N 186
+RAV TE+ ++FA++ GL FLETSA A NVE AF+ EI F++ N+
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G G GN P + P + KSS CC
Sbjct: 185 IKVGYGAGNAGPQAAK--------PGEGDARKSSSCC 213
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I KSVK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR +F H+ RWLEE R H+ N+VI+LIGNK+DLE
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNKNDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF-NIVNKK 185
+RAV TE+ K FA K GL F+ETSA A NVE AF+ EI NIV+ K
Sbjct: 125 HRRAVSTEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIVSGK 175
>gi|224159768|ref|XP_002338122.1| predicted protein [Populus trichocarpa]
gi|222870939|gb|EEF08070.1| predicted protein [Populus trichocarpa]
Length = 106
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/105 (91%), Positives = 100/105 (95%)
Query: 118 HADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTE 177
HADKNIVIILIGNKSDLE+QRAVPTEDAKEFAQKEGLFFLETSAL+ATNVENAFMTVLTE
Sbjct: 1 HADKNIVIILIGNKSDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTE 60
Query: 178 IFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IFNIVNKKNL AGE Q NGNPASLSGKKI++PGPAQEIPAKS C
Sbjct: 61 IFNIVNKKNLVAGEDQINGNPASLSGKKIIIPGPAQEIPAKSKCC 105
>gi|242097064|ref|XP_002439022.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
gi|241917245|gb|EER90389.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
Length = 209
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 135/196 (68%), Gaps = 17/196 (8%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DYVFK+V+IGDSAVGK+Q+L RF R+EF LDSK+TIG+EFQTRT+ I VKAQIWDTA
Sbjct: 4 DYVFKIVVIGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G YYRGA+GAMLVYD++ R H RW+ ELR+HADK+IV++L+GNK+DL
Sbjct: 64 GAR-------TYYRGALGAMLVYDVTSR----HAARWVTELRAHADKSIVVMLVGNKADL 112
Query: 135 EEQRAVPTEDAKE--FAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG-- 190
AV + FA+++GLFF E SAL NVE AF+T+L EI V++K L A
Sbjct: 113 AG--AVRWRQTRRPLFAEEQGLFFSEASALSGDNVERAFLTLLQEIHANVSRKRLEAAPD 170
Query: 191 EGQGNGNPASLSGKKI 206
E G + +L G K+
Sbjct: 171 EDTGAADVLALKGTKL 186
>gi|384253262|gb|EIE26737.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 1/209 (0%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R HA+ N+ I+LIGNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSDLT 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL-TAGEGQG 194
+RAV TE+ ++FA++ GL FLETSA A NVE AF+ +I+ + + + E G
Sbjct: 125 HRRAVTTEEGEQFAKEHGLVFLETSAKTAHNVEEAFINTARKIYEKIEQGVFDVSNESYG 184
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G P PAKSS CC
Sbjct: 185 IKVGYGAGGSAGGTVRPGDPAPAKSSSCC 213
>gi|313216504|emb|CBY37802.1| unnamed protein product [Oikopleura dioica]
gi|313232450|emb|CBY24118.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 124/173 (71%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+ K ++IGD VGKS +L +F +F D TIGVE+ TR + + + +K QIWDTA
Sbjct: 9 DYILKYIIIGDQGVGKSCLLHQFTEKKFMADCPHTIGVEYGTRIIEVAGQRIKLQIWDTA 68
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQER+RAVT +YYRG+ GA++VYDI+RRQ+F+H+ WL + +HA N VI LIGNKSDL
Sbjct: 69 GQERFRAVTRSYYRGSSGAIMVYDITRRQTFNHLEAWLTDATNHASPNTVIFLIGNKSDL 128
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
E+QR VPTE+A+EFA++ GL F E SA NVE+AF+ +I+ + + +L
Sbjct: 129 EDQRDVPTEEAREFAREHGLHFCEASAKTGENVEDAFLETAKQIYQKIQEGSL 181
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 146/215 (67%), Gaps = 8/215 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VL+GD VGK+QI R+ +EF+ SK+TIGVEF +T+ I +K QIWDT+
Sbjct: 4 DYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDTS 63
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
G+ERYRA+TSAYYRG+VGA+LV+D+++ +SF+ + W +LR +AD+NIV+ ++GNK DL
Sbjct: 64 GEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKIDL 123
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
R V T +A+ FA+ G F++ETSAL+ T VENAF V +IF IV+ + +
Sbjct: 124 -PTREVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSRQQAR---KK 179
Query: 195 NGNPASLSGKKILVPGPAQEI--PA--KSSMCCRT 225
+S+ + + G A E+ P+ SS CC+T
Sbjct: 180 TVRASSIGQTRSIKLGEADEVAKPSIFSSSDCCKT 214
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 123/167 (73%)
Query: 21 VLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYR 80
VL GDS VGKS +L+RF++NEF DS+ TIGVEF R + + K VK QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 81 AVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAV 140
A+TS+YYRGA+GA+LVYDI+R +FD+I +WL ELR + +VIIL+GNK DL + R V
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 141 PTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
E+A+ A+ E LFF+ETSA + NVE AF+ ++ I I ++K L
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 167
>gi|298709147|emb|CBJ31092.1| Rab2A, RAB family GTPase [Ectocarpus siliculosus]
Length = 208
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 140/211 (66%), Gaps = 10/211 (4%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I ++ +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR +F+H+ RWLEE R +++ N+VI+LIGNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLT 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF-NIVNKKNLTAGEGQG 194
+RAV T++ ++FA++ GL FLETSA ATNVE AF+ +I+ NI++ E G
Sbjct: 125 SRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHG 184
Query: 195 --NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G ASL+ + P PA S CC
Sbjct: 185 IKLGPAASLNYNNV---AP----PADKSSCC 208
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 138/219 (63%), Gaps = 15/219 (6%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ------ 62
D + DY+ K+V++GDS VGKS I++RF + F SK TIGV F T+ + ++
Sbjct: 4 DASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDST 63
Query: 63 ---HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHA 119
K VK Q+WDTAGQERYRA++SAYYRGA GA++VYDI+ R+S D IP+WLEE+ +
Sbjct: 64 KDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKYC 123
Query: 120 DKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
+++V+ L+GNK DL E R V E+ K+ A +E +FF+ETSA +ATN+E AF ++ EI
Sbjct: 124 TQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIKEII 183
Query: 180 NIVNKKNLTAGEGQGN--GNPASLSGKKILVPGPAQEIP 216
+ NL+ G G S +G + P + P
Sbjct: 184 ----QSNLSQANNDGKIAGKAPSDTGITLKPPEEPESDP 218
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 143/213 (67%), Gaps = 13/213 (6%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q+ +Y++K+VLIGDS+VGK+ +L R A N F+ ++K+TIGVEF T+ V+ K +KAQIW
Sbjct: 6 QEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQIW 65
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHI-PRWLEELRSHADKNIVIILIGN 130
DTAGQERYRA+TSAYYRGAVGA++VYDI+R++SFD+ W+++L+ +++ +VI L+GN
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVISLVGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DLEE+R V ++A+E AQ ETSAL NV+ AF ++ +I+ T
Sbjct: 126 KTDLEEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIYQ-------TRT 178
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ NG S I+ + A SS CC
Sbjct: 179 AERNNGPKPS-----IINLEDDSSMKASSSWCC 206
>gi|301105767|ref|XP_002901967.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099305|gb|EEY57357.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 210
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 141/211 (66%), Gaps = 8/211 (3%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I++K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ RWLEE R +++ N+ I+LIGNKSDLE
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
+RAV ++ ++FA++ GL FLETSA A NVE+AF+ ++I++ + + + + +
Sbjct: 125 HRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNI-QSGVCDVTNEAH 183
Query: 196 GNPASLSGKKILVPGP---AQEIPAKSSMCC 223
G ++G PGP P S CC
Sbjct: 184 GIKVGMTGS----PGPGGFGNSNPPASRGCC 210
>gi|440800473|gb|ELR21511.1| Rab GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 125/180 (69%), Gaps = 9/180 (5%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ------ 62
D + DY+ K+V++GDS VGKS I++RF + F SK TIGV F T+ + ++
Sbjct: 4 DASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDST 63
Query: 63 ---HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHA 119
K VK Q+WDTAGQERYRA++SAYYRGA GA++VYDI+ R+S D IP+WLEE+ +
Sbjct: 64 KDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKYC 123
Query: 120 DKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
+++V+ L+GNK DL E R V E+ K+ A +E +FF+ETSA +ATN+E AF ++ EI
Sbjct: 124 TQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIKEII 183
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 136/217 (62%), Gaps = 17/217 (7%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR +F+H+ WLE+ R H++ N+VI+LIGNKSDLE
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKN- 186
+R V E+ + FA++ GL F+ETSA A NVE AF+ EI F+I N+ N
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G+ PA +PG + + SS CC
Sbjct: 185 IKIGQQHSPTYPA--------LPGTGSQAGSASSGCC 213
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 127/158 (80%)
Query: 37 FARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLV 96
F RNEF+L++K+TIGVEF TR++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LV
Sbjct: 14 FTRNEFNLETKSTIGVEFATRSIETEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLV 73
Query: 97 YDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFF 156
YDI+++ ++ + RWL ELR +AD+NI I+L+GNK+DL R V T++AK+FA+K L F
Sbjct: 74 YDIAKQATYKSVERWLTELRENADRNIEIMLVGNKNDLRHLREVSTDEAKDFAEKHKLSF 133
Query: 157 LETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
+ETSAL+++NVE AF T+LT+I + +N++ +G G
Sbjct: 134 IETSALDSSNVEIAFQTILTQICHSMNRQPSISGGQSG 171
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 141/212 (66%), Gaps = 6/212 (2%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FK++LIG+S+VGKS +L RF+ N F+ TIGV+F+ RT IQ K+VK QIW
Sbjct: 5 QDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER++ +TS+YY+GA G +LVYDI+ RQ+F I WL E +A++N++ +L+GNK
Sbjct: 65 DTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNWLAEADKNANENVIKLLVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DLE +R V ++ KE A G+ F+ETSAL A+NVENAF+T+ TEI + V K + +
Sbjct: 125 IDLENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATEIISRVQK----SSD 180
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GN A SGK + G K CC
Sbjct: 181 NNKGGNQA--SGKTRIRAGEDINNIKKQGGCC 210
>gi|348536088|ref|XP_003455529.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 133/210 (63%), Gaps = 6/210 (2%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + VK QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE AF+ I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEEAFLEAAKRIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P++L G + P A PAK C
Sbjct: 190 VQHKPSTLQGGR---PN-ADNQPAKEGCSC 215
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 142/212 (66%), Gaps = 11/212 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N Y+FK++LIGDS VGKS +L RFA + +S +TIGV+F+ RT+ + K++K QI
Sbjct: 2 NPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+R +TS+YYRGA G ++VYD++ R +FD++ +WL+E+ A +++ +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGN 121
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL ++ V T AK FA G+ FLETSA ++TNVE AFMT+ TEI K LTA
Sbjct: 122 KSDLVAKKVVDTNTAKSFADTLGIPFLETSAKQSTNVEQAFMTMATEI-----KNRLTAS 176
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+ PA +G +VPG + I KS C
Sbjct: 177 Q------PAPTTGGAKVVPGSSAPIQTKSGCC 202
>gi|348684558|gb|EGZ24373.1| hypothetical protein PHYSODRAFT_483962 [Phytophthora sojae]
Length = 210
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 141/211 (66%), Gaps = 8/211 (3%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I++K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ RWLEE R +++ N+ I+LIGNKSDLE
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
+RAV ++ ++FA++ GL FLETSA A NVE+AF+ ++I++ + + + + +
Sbjct: 125 HRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNI-QSGVCDVTNEAH 183
Query: 196 GNPASLSGKKILVPGP---AQEIPAKSSMCC 223
G ++G PGP P + CC
Sbjct: 184 GIKVGMTGS----PGPGGFGNSNPPANRGCC 210
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 143/213 (67%), Gaps = 13/213 (6%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q+ +Y++K+VLIGDS VGK+ +L R A N F+ ++K+TIGVEF T+ V+ K +KAQIW
Sbjct: 10 QEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQIW 69
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHI-PRWLEELRSHADKNIVIILIGN 130
DTAGQERYRA+TSAYYRGAVGA++VYDISR+++FD+ W+++L+ +++ +VI L+GN
Sbjct: 70 DTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDNSESGLVISLVGN 129
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL E+R V ++A+E AQ G ETSAL NV+ AF T++ +I+ AG
Sbjct: 130 KTDLNEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLIQKIYQT------RAG 183
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
E S + I+ + A +S CC
Sbjct: 184 ERH------SAPKQDIINLEDDAAMKASNSWCC 210
>gi|145540567|ref|XP_001455973.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834247|emb|CAI44494.1| rab_C46 [Paramecium tetraurelia]
gi|124423782|emb|CAK88576.1| unnamed protein product [Paramecium tetraurelia]
Length = 227
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 142/219 (64%), Gaps = 10/219 (4%)
Query: 14 IDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDT 73
I +VFK++L+G +AVGKSQIL RF +++F+L S TIGVEF + L I +K ++ Q+WDT
Sbjct: 10 IAHVFKIILLGSTAVGKSQILLRFTKDQFNLSSNTTIGVEFSAKVLEIDNKKIRVQVWDT 69
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD-KNIVIILIGNKS 132
AGQE+YRA+ AYY+GAVGA LVYDI+++ SF + RWL+E+R ++D +N+V++LIGNK+
Sbjct: 70 AGQEKYRAIAKAYYKGAVGAFLVYDITKKNSFLEVDRWLQEIRDYSDQQNLVLMLIGNKN 129
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK----KNLT 188
DLE QR V E+A ++AQ + + FLETSA N+E AF + EI +++
Sbjct: 130 DLEAQRQVSKEEAIKYAQSKKMGFLETSAQTGHNIEFAFKQIAEEILRDISETQDDDEFE 189
Query: 189 AGEGQGNGNPASLSGKKILVPGPAQEIPAK----SSMCC 223
+ Q + N S +L Q + K S CC
Sbjct: 190 QTKAQYSKNKGQTSNASVLKAADHQ-VKKKNNNNSGTCC 227
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 126/168 (75%), Gaps = 7/168 (4%)
Query: 56 TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEEL 115
TR++ I K+VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++R+ +F+++ RWL+EL
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKEL 60
Query: 116 RSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVL 175
R H D NIVI+L+GNK+DL RAVPTE+A FA++E +F+ETSALE+ NV+NAF+ VL
Sbjct: 61 RDHTDANIVIMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVL 120
Query: 176 TEIFNIVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+EI+N+V++K L G +P +L + + G + K CC
Sbjct: 121 SEIYNVVSRKTLEKG-----NDPGALPQGQTINLGDVSAV--KKPGCC 161
>gi|326427375|gb|EGD72945.1| GTP-binding protein yptV1 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 122/164 (74%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGDSAVGKS +L +F + F TIGVEF R + I +K QIWDTAG
Sbjct: 6 YLFKYIIIGDSAVGKSCLLLQFTDHRFQTVHDLTIGVEFGARMVTIDGHQIKLQIWDTAG 65
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F H+ WLE+ R+H++ N+VIIL+GNK+DLE
Sbjct: 66 QESFRSITRSYYRGAAGALLVYDITRRETFQHLGTWLEDARAHSNPNMVIILVGNKADLE 125
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
++R VP E+ + FA++ GL F+ETSA A NVE+AF T +I+
Sbjct: 126 DKRQVPREEGERFARERGLLFIETSAKTAMNVEDAFTTTANKIY 169
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQI 70
Q DY+FK+VLIGDS VGKS +L RF + F LDSK+TIGVEF T+ + +++ K KAQI
Sbjct: 4 QTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQI 63
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGA GA++VYDI+ +QSF ++ RWL EL + D N++I L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALVGN 123
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI 178
KSDL R V ED + +A+ L F ETS L N++ F +L I
Sbjct: 124 KSDLTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 125/166 (75%), Gaps = 1/166 (0%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH-KSVKAQIWDT 73
DY++K+VLIGDS VGKS +L R+ +NEF+L+SK+TIGVEF T ++++ K K QIWDT
Sbjct: 8 DYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQIWDT 67
Query: 74 AGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSD 133
AGQERYRA+TSAYYRGAVGA++ YDI+ R SF+++ RWL+ELR +A + VI L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVGNKVD 127
Query: 134 LEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
+ R V ++ + A+ E + FLE SAL++TNV AF ++ I+
Sbjct: 128 MVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIY 173
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus anophagefferens]
Length = 210
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 128/175 (73%), Gaps = 5/175 (2%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F + TIGVEF R + I + +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAIDERQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ RWLEE R +++ N+V++LIGNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMVVMLIGNKSDLG 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
+RAV T++ +EFA+K GL F+ETSA ++NVE AF+ + I +N+TAG
Sbjct: 125 HRRAVSTDEGEEFARKNGLVFMETSAKTSSNVERAFIDTASTI-----HENITAG 174
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 139/212 (65%), Gaps = 12/212 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQ DY+FK++LIGDS VGKS +L RFA + + +TIGV+F+ RT+ K++K QI
Sbjct: 2 NQDYDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+R +TS+YYRGA G ++VYD++ +QSFD++ +WL E+ +A N+V IL+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQWLNEIDRYASDNVVKILVGN 121
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL + V +E AK FA + G+ FLETSA +TNVE AFMT+ EI KK + +
Sbjct: 122 KSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEI-----KKRVAS- 175
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
PAS + + VP KS+ C
Sbjct: 176 ------QPASNATRPTTVPXRXXXXXQKSNCC 201
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 124/169 (73%), Gaps = 6/169 (3%)
Query: 58 TLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRS 117
++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++R +F+++ RW+ EL+
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKD 60
Query: 118 HADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTE 177
H D NIVI+L+GNK+DL RAV TEDAK FA+KE FF+ETSALE+ NVENAF VLT+
Sbjct: 61 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQ 120
Query: 178 IFNIVNKKNLTAGEGQGNGNPAS-LSGKKILVPGPAQEIPAKSSMCCRT 225
I+++V+KK L G+ +PA+ G+ I V G K S CC +
Sbjct: 121 IYHVVSKKALDIGD-----DPAAPPKGQTINVGGKDDVSAVKKSACCSS 164
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 115/140 (82%)
Query: 9 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA 68
D DY+FK+VLIGDS VGKS +L+RF +EF+++SK+TIGVEF TRT+ +++K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKA 64
Query: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILI 128
QIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLI 124
Query: 129 GNKSDLEEQRAVPTEDAKEF 148
GNKSDL RAVPT++AK+F
Sbjct: 125 GNKSDLAHLRAVPTDEAKKF 144
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 138/215 (64%), Gaps = 8/215 (3%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I +K +K QIWDTAG
Sbjct: 6 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDNKQIKLQIWDTAG 65
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR +F+H+ WLE+ RSH++ N+VIILIGNK+DL+
Sbjct: 66 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARSHSNPNMVIILIGNKTDLD 125
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF-----NIVNKKNLTAG 190
+RAV E+ ++FA++ GL F+ETSA ATNVE AF+ I+ N+ + KN G
Sbjct: 126 SKRAVTREEGEQFARENGLIFMETSAKNATNVEEAFIQTAQAIYSKIQENVFDIKNEMNG 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKS--SMCC 223
G ++ + P Q+ P S CC
Sbjct: 186 IKVGPQLAGGAGSTRLDLRAPQQK-PTNSEGGGCC 219
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 134/187 (71%), Gaps = 5/187 (2%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FK++LIG+S+VGKS +L RF+ N F+ TIGV+F+ RT IQ K+VK QIW
Sbjct: 5 QDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER++ +TS+YY+GA G +LVYDI+ RQ+F I WL E +A++N+V +L+GNK
Sbjct: 65 DTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNWLAEADKNANENVVKLLVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV-----NKKN 186
DLE +R V ++ KE A G+ F+ETSAL A NVENAF+T+ TEI + V NK N
Sbjct: 125 IDLENKRQVSFDEGKELADSLGIKFIETSALTANNVENAFVTLATEIKSRVQKTTDNKNN 184
Query: 187 LTAGEGQ 193
AG+G+
Sbjct: 185 NAAGQGK 191
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 139/212 (65%), Gaps = 5/212 (2%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FK++LIG+SAVGKS +L RF+ N F+ TIGV+F+ RT IQ K+VK QIW
Sbjct: 5 QDYDYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKAVKLQIW 64
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER++ +TS+YY+GA G +LVYDI+ +Q+F I WL E +A++N++ +L+GNK
Sbjct: 65 DTAGQERFKTITSSYYKGAHGIILVYDITDKQTFKDIDNWLAEADKNANENVIKLLVGNK 124
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
+DLE +R V E+ KE A G+ F+ETSAL + NVE AF+T+ TEI + V K TA
Sbjct: 125 ADLESKRQVTFEEGKELADSLGIKFIETSALNSNNVETAFITLATEIKSRVQKNTETAPR 184
Query: 192 GQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G + +GK + G K CC
Sbjct: 185 G-----ANAQTGKTKIKAGDDLSNKKKKDGCC 211
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 137/217 (63%), Gaps = 17/217 (7%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R H++ N+VI+LIGNKSDL+
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKN- 186
+R V E+ + FA++ GL F+ETSA A NVE AF+ EI F+I N+ N
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G+ NPA +PG A +S CC
Sbjct: 185 IKIGQQATPTNPA--------LPGSGGAGGAVNSGCC 213
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 130/193 (67%), Gaps = 9/193 (4%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I+ K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR +F+H+ WLE+ R H++ N+VI+LIGNKSDLE
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKN- 186
+R V E+ + FAQ+ GL F+ETSA A NVE+AF+ EI F+I N+ N
Sbjct: 125 GRREVKKEEGEAFAQEHGLVFMETSAKTADNVEDAFINTAKEIYDKIQDGVFDINNEANG 184
Query: 187 LTAGEGQGNGNPA 199
+ G Q N +P
Sbjct: 185 IKIGPQQANTSPG 197
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 138/216 (63%), Gaps = 18/216 (8%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R H++ N+VI+LIGNKSDLE
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKNL 187
+R V E+ + FA++ GL F+ETSA A NVE AF+ EI F+I N+ N
Sbjct: 125 SRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINNEAN- 183
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G NP++ S VP + P +S CC
Sbjct: 184 --GIKLGPQNPSNPSTS---VP----DRPPQSGGCC 210
>gi|350534852|ref|NP_001232642.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128799|gb|ACH45297.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 215
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 134/202 (66%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +FA +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFAEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKILV-PGPAQE 214
P++ G ++ P P +E
Sbjct: 190 VQHKPSAPQGGRLTSEPQPQRE 211
>gi|449434064|ref|XP_004134816.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 137/216 (63%), Gaps = 18/216 (8%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F N F TIGVEF R + I++K +K QIWDTAG
Sbjct: 5 YLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R HA+ N+ I+LIGNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNKSDLA 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF-----NIVNKKNLTAG 190
+RAV TE+ + FA++ GL F+E SA A NVE AF+ IF + + N + G
Sbjct: 125 HRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNESYG 184
Query: 191 EGQGNGNPASLSGKKILVPGPA---QEIPAKSSMCC 223
G G +PGP+ + A++ CC
Sbjct: 185 IKVGYGG----------IPGPSGSREGSSAQAGGCC 210
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 137/217 (63%), Gaps = 17/217 (7%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R H++ N+VI+LIGNKSDL+
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKN- 186
+R V E+ + FA++ GL F+ETSA A NVE AF+ EI F+I N+ N
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G+ NP+ SG PG SS CC
Sbjct: 185 IKIGQQHSPTNPSLGSGNN---PG-----GQSSSGCC 213
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 137/217 (63%), Gaps = 8/217 (3%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q YVFK +++GDSAVGKS +L +F F TIGVEF +RT+ I K++K QIW
Sbjct: 4 QSYSYVFKYIIVGDSAVGKSCLLLQFTDKRFKSTHDLTIGVEFGSRTVQINDKAIKLQIW 63
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQE +R++T +YYRG++GA+LVYD+++RQSF+++ +WLEE++ +A + ILIGNK
Sbjct: 64 DTAGQESFRSITRSYYRGSIGALLVYDVTKRQSFENLQKWLEEMKENAYSKMTTILIGNK 123
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV-----NKKN 186
DLE +R V E+ + FA+K L F ETSA A NVE AF+ + +I+ + N
Sbjct: 124 IDLENERQVSYEEGQAFAKKHDLVFFETSAKSAHNVEKAFLAITQKIYTNLENGEYNIHK 183
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G GN P + G + P + P KS CC
Sbjct: 184 ESIGIKPGNTLPTYIQGG---LKDPKRGDPKKSEGCC 217
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
+ +VV+IG+S VGKS +L RF RNE+ + K TIGVEF TRT+ K+++AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE+YRA+T AYYRGA GA+ VYD+S++ +F I RW+ EL++ ++VI+++GNKSDLE
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLT 188
++R V + +EFAQ+ FF+ETSAL NVE AF +L I+ KKN T
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIY---KKKNTT 190
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 138/217 (63%), Gaps = 18/217 (8%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR +F+H+ WLE+ R H+ N+VI+LIGNKSDLE
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKN- 186
+R V E+ + FA++ GL F+ETSA A NVE AF+ EI F+I N+ N
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQKIQEGVFDINNEANG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G + +P+++SG G A + +S CC
Sbjct: 185 IKIGPQHTSSSPSTISG------GAANQ---QSGGCC 212
>gi|209881440|ref|XP_002142158.1| Rab2 GTPase protein [Cryptosporidium muris RN66]
gi|209557764|gb|EEA07809.1| Rab2 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 214
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 132/192 (68%), Gaps = 6/192 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK ++IGD+AVGKS +L +F + F +D TIGVEF R + I K +K QIWDTA
Sbjct: 6 DYLFKYIIIGDTAVGKSCLLLQFTDHRFRIDHDLTIGVEFGARVVNIDSKQIKLQIWDTA 65
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQE +R++T +YYRGA GA+LVYDISRR++F+H+ RWL E++ +A + I+LIGNKSDL
Sbjct: 66 GQESFRSITRSYYRGAAGALLVYDISRRETFNHLGRWLSEVKKNAAPYMTIMLIGNKSDL 125
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN-----IVNKKNLTA 189
E+R V TE+ +FAQ+ GL FLETSA A NVE AF+ +I+ + + N
Sbjct: 126 -ERREVTTEEGSQFAQQNGLIFLETSAKTAHNVEEAFVKTAEKIYKNILDGVYDLTNEAH 184
Query: 190 GEGQGNGNPASL 201
G GN N ++L
Sbjct: 185 GIKCGNSNNSNL 196
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 141/212 (66%), Gaps = 10/212 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ ++ K++K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+R +TS+YYRGA G ++VYD++ +SF+ + WL E+ +A++N+ +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKGWLNEIDRYANENVNKLLVGN 121
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL Q+ V AK FA + G+ F+ETSA ATNVE AFMT+ EI KN A
Sbjct: 122 KSDLTSQKVVDYATAKAFADEIGIPFIETSAKNATNVEQAFMTMANEI------KNRMAS 175
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
+ Q N P + PG + + AKSS C
Sbjct: 176 QPQMNAGPRG----NTVRPGEGRSVNAKSSCC 203
>gi|63087695|emb|CAI92129.1| RAB14 protein [Mus musculus]
Length = 215
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 134/202 (66%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLDAAESG 189
Query: 194 GNGNPASLSGKKILV-PGPAQE 214
P++ G +++ P P +E
Sbjct: 190 VQHKPSAPQGGRLISEPQPQRE 211
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 143/213 (67%), Gaps = 10/213 (4%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ ++ K+VK QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+R +TS+YYRGA G ++VYD++ +SF+++ +WL E+ +A++N+ +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVGN 121
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL +RAV E AK FA + G+ FLETSA ATNVE AFMT+ EI K A
Sbjct: 122 KSDLTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI------KTRMAS 175
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N P + + PG + + +S CC
Sbjct: 176 QPALNQGPKGATVR----PGEGRPVGKANSQCC 204
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+++ DY+FKVVL+GDS VGKS +L+RF RN F L++K+TIGVEF TR+++I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADK-NIVIILIG 129
WDTAGQERYRA+T AYYRGA+G ++VYDI++ Q+F +I +WL+ELR+HAD+ NI I+L+G
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFL 157
NK+DL RAVPT++A +A + + F+
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFI 153
>gi|348532847|ref|XP_003453917.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKIL-VPGPAQE 214
P++ G +I P P +E
Sbjct: 190 VQHKPSAPQGGRITNEPQPQRE 211
>gi|71417072|ref|XP_810463.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70874996|gb|EAN88612.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 119/171 (69%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+ + FKVV+IGDS VGKS ++ R+ NEFS D+ ATIGVEF T+++ I+ + K QIW
Sbjct: 2 ENTNLTFKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIW 61
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RA++ + Y GA GAMLVYDI+ + SFD IP WL+ELR I LIGNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNK 121
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
DLE R V E A FA++ GL FLETSALE TNVE AF + ++++V
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV 172
>gi|440911197|gb|ELR60903.1| Ras-related protein Rab-14, partial [Bos grunniens mutus]
Length = 218
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 13 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 72
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 73 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 132
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 133 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 192
Query: 194 GNGNPASLSGKKILV-PGPAQE 214
P++ G ++ P P +E
Sbjct: 193 VQHKPSAPQGGRLTSEPQPQRE 214
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 138/217 (63%), Gaps = 17/217 (7%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R H++ N+VI+LIGNKSDL+
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKN- 186
+R V E+ + FA++ GL F+ETSA A NVE AF+ EI F+I N+ N
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G+ +P+ SG GPA SS CC
Sbjct: 185 IKIGQQHSPTSPSLGSGNS--PGGPA------SSGCC 213
>gi|407867485|gb|EKG08588.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 217
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 119/171 (69%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+ + FKVV+IGDS VGKS ++ R+ NEFS D+ ATIGVEF T+++ I+ + K QIW
Sbjct: 2 EDTNLTFKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIW 61
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RA++ + Y GA GAMLVYDI+ + SFD IP WL+ELR I LIGNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNK 121
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
DLE R V E A FA++ GL FLETSALE TNVE AF + ++++V
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV 172
>gi|410904150|ref|XP_003965555.1| PREDICTED: ras-related protein Rab-14-like [Takifugu rubripes]
Length = 215
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKILV-PGPAQE 214
P++ G ++ P P +E
Sbjct: 190 VQHKPSAPQGGRLTSEPQPQKE 211
>gi|71410719|ref|XP_807641.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70871685|gb|EAN85790.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 119/171 (69%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+ + FKVV+IGDS VGKS ++ R+ NEFS D+ ATIGVEF T+++ I+ + K QIW
Sbjct: 2 EDTNLTFKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIW 61
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQER+RA++ + Y GA GAMLVYDI+ + SFD IP WL+ELR I LIGNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNK 121
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIV 182
DLE R V E A FA++ GL FLETSALE TNVE AF + ++++V
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV 172
>gi|18390323|ref|NP_080973.1| ras-related protein Rab-14 [Mus musculus]
gi|19923483|ref|NP_057406.2| ras-related protein Rab-14 [Homo sapiens]
gi|55926076|ref|NP_001007505.1| rab14, member ras oncogene family [Xenopus (Silurana) tropicalis]
gi|61098298|ref|NP_001012814.1| ras-related protein Rab-14 [Gallus gallus]
gi|147900213|ref|NP_001087980.1| RAB14, member RAS oncogene family [Xenopus laevis]
gi|195539521|ref|NP_001124226.1| ras-related protein Rab-14 [Bos taurus]
gi|302563523|ref|NP_001181724.1| ras-related protein Rab-14 [Macaca mulatta]
gi|327532767|ref|NP_001126022.1| ras-related protein Rab-14 [Pongo abelii]
gi|73971644|ref|XP_532048.2| PREDICTED: ras-related protein Rab-14 isoform 1 [Canis lupus
familiaris]
gi|109110403|ref|XP_001093688.1| PREDICTED: ras-related protein Rab-14-like isoform 1 [Macaca
mulatta]
gi|149641912|ref|XP_001512641.1| PREDICTED: ras-related protein Rab-14-like [Ornithorhynchus
anatinus]
gi|149738078|ref|XP_001504767.1| PREDICTED: ras-related protein Rab-14-like [Equus caballus]
gi|291408446|ref|XP_002720547.1| PREDICTED: GTPase Rab14 [Oryctolagus cuniculus]
gi|296190707|ref|XP_002743309.1| PREDICTED: ras-related protein Rab-14 [Callithrix jacchus]
gi|297270257|ref|XP_002800040.1| PREDICTED: ras-related protein Rab-14-like isoform 3 [Macaca
mulatta]
gi|301760428|ref|XP_002916000.1| PREDICTED: ras-related protein Rab-14-like [Ailuropoda melanoleuca]
gi|326930488|ref|XP_003211378.1| PREDICTED: ras-related protein Rab-14-like [Meleagris gallopavo]
gi|327290961|ref|XP_003230190.1| PREDICTED: ras-related protein Rab-14-like [Anolis carolinensis]
gi|332229896|ref|XP_003264122.1| PREDICTED: ras-related protein Rab-14 [Nomascus leucogenys]
gi|332832748|ref|XP_001149341.2| PREDICTED: ras-related protein Rab-14 [Pan troglodytes]
gi|334311476|ref|XP_001369724.2| PREDICTED: ras-related protein Rab-14-like [Monodelphis domestica]
gi|344271990|ref|XP_003407819.1| PREDICTED: ras-related protein Rab-14-like [Loxodonta africana]
gi|348586253|ref|XP_003478883.1| PREDICTED: ras-related protein Rab-14-like [Cavia porcellus]
gi|354491502|ref|XP_003507894.1| PREDICTED: ras-related protein Rab-14-like [Cricetulus griseus]
gi|395505605|ref|XP_003757130.1| PREDICTED: ras-related protein Rab-14 [Sarcophilus harrisii]
gi|397526487|ref|XP_003833155.1| PREDICTED: ras-related protein Rab-14 [Pan paniscus]
gi|402896514|ref|XP_003911342.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|402896516|ref|XP_003911343.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|403266081|ref|XP_003925225.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|403266083|ref|XP_003925226.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|410978973|ref|XP_003995861.1| PREDICTED: ras-related protein Rab-14 [Felis catus]
gi|426219615|ref|XP_004004014.1| PREDICTED: ras-related protein Rab-14 [Ovis aries]
gi|426362889|ref|XP_004048583.1| PREDICTED: ras-related protein Rab-14 isoform 1 [Gorilla gorilla
gorilla]
gi|426362891|ref|XP_004048584.1| PREDICTED: ras-related protein Rab-14 isoform 2 [Gorilla gorilla
gorilla]
gi|432885910|ref|XP_004074817.1| PREDICTED: ras-related protein Rab-14-like [Oryzias latipes]
gi|46577103|sp|Q91V41.3|RAB14_MOUSE RecName: Full=Ras-related protein Rab-14
gi|75054939|sp|Q5R8Z8.3|RAB14_PONAB RecName: Full=Ras-related protein Rab-14
gi|75571353|sp|Q5ZKU5.3|RAB14_CHICK RecName: Full=Ras-related protein Rab-14
gi|85700392|sp|P61106.4|RAB14_HUMAN RecName: Full=Ras-related protein Rab-14
gi|11274539|pir||T47160 hypothetical protein DKFZp762K0911.1 - human
gi|6563200|gb|AAF17194.1|AF112206_1 ras-related protein rab-14 [Homo sapiens]
gi|7328166|emb|CAB82414.1| hypothetical protein [Homo sapiens]
gi|10435483|dbj|BAB14598.1| unnamed protein product [Homo sapiens]
gi|12832884|dbj|BAB22298.1| unnamed protein product [Mus musculus]
gi|13543869|gb|AAH06081.1| RAB14, member RAS oncogene family [Homo sapiens]
gi|14290609|gb|AAH09085.1| RAB14, member RAS oncogene family [Mus musculus]
gi|19263820|gb|AAH25139.1| RAB14, member RAS oncogene family [Mus musculus]
gi|34785287|gb|AAH56648.1| RAB14, member RAS oncogene family [Mus musculus]
gi|45444739|gb|AAS64573.1| F protein-binding protein 1 [Homo sapiens]
gi|48146905|emb|CAG33675.1| RAB14 [Homo sapiens]
gi|51261919|gb|AAH79941.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|52138917|gb|AAH82642.1| LOC494665 protein [Xenopus laevis]
gi|53130638|emb|CAG31648.1| hypothetical protein RCJMB04_9b24 [Gallus gallus]
gi|55730075|emb|CAH91762.1| hypothetical protein [Pongo abelii]
gi|63087687|emb|CAI92125.1| RAB14 protein [Mus musculus]
gi|74144398|dbj|BAE36051.1| unnamed protein product [Mus musculus]
gi|74151588|dbj|BAE41143.1| unnamed protein product [Mus musculus]
gi|74214376|dbj|BAE40426.1| unnamed protein product [Mus musculus]
gi|74223093|dbj|BAE40686.1| unnamed protein product [Mus musculus]
gi|74227269|dbj|BAE38391.1| unnamed protein product [Mus musculus]
gi|74228978|dbj|BAE21957.1| unnamed protein product [Mus musculus]
gi|89269928|emb|CAJ81706.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|112292987|dbj|BAF02871.1| Rab14 [Mus musculus]
gi|117645408|emb|CAL38170.1| hypothetical protein [synthetic construct]
gi|117645524|emb|CAL38228.1| hypothetical protein [synthetic construct]
gi|119607893|gb|EAW87487.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607894|gb|EAW87488.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148676698|gb|EDL08645.1| RAB14, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149038930|gb|EDL93150.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|158455025|gb|AAI03316.2| RAB14 protein [Bos taurus]
gi|165971228|gb|AAI58586.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|193786920|dbj|BAG52243.1| unnamed protein product [Homo sapiens]
gi|261860956|dbj|BAI47000.1| RAB14, member RAS oncogene family [synthetic construct]
gi|296484316|tpg|DAA26431.1| TPA: RAB14, member RAS oncogene family [Bos taurus]
gi|344243592|gb|EGV99695.1| Ras-related protein Rab-14 [Cricetulus griseus]
gi|351698913|gb|EHB01832.1| Ras-related protein Rab-14 [Heterocephalus glaber]
gi|355567473|gb|EHH23814.1| Ras-related protein Rab-14 [Macaca mulatta]
gi|355753061|gb|EHH57107.1| Ras-related protein Rab-14 [Macaca fascicularis]
gi|380784807|gb|AFE64279.1| ras-related protein Rab-14 [Macaca mulatta]
gi|383409425|gb|AFH27926.1| ras-related protein Rab-14 [Macaca mulatta]
gi|384940268|gb|AFI33739.1| ras-related protein Rab-14 [Macaca mulatta]
gi|410217966|gb|JAA06202.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410258386|gb|JAA17160.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410308836|gb|JAA33018.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410348640|gb|JAA40924.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|417397261|gb|JAA45664.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431900765|gb|ELK08206.1| Ras-related protein Rab-14 [Pteropus alecto]
Length = 215
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKILV-PGPAQE 214
P++ G ++ P P +E
Sbjct: 190 VQHKPSAPQGGRLTSEPQPQRE 211
>gi|16758368|ref|NP_446041.1| ras-related protein Rab-14 [Rattus norvegicus]
gi|72535182|ref|NP_001026953.1| ras-related protein Rab-14 [Sus scrofa]
gi|46577632|sp|P61107.3|RAB14_RAT RecName: Full=Ras-related protein Rab-14
gi|75060237|sp|Q52NJ6.3|RAB14_PIG RecName: Full=Ras-related protein Rab-14
gi|6002803|gb|AAF00150.1|AF152463_1 RAB14 protein [Homo sapiens]
gi|20379074|gb|AAM21097.1|AF498949_1 small GTP binding protein RAB14 [Homo sapiens]
gi|206535|gb|AAA41994.1| RAB14 [Rattus norvegicus]
gi|6625806|gb|AAF19400.1| GTPase Rab14 [Homo sapiens]
gi|62868634|gb|AAY17505.1| Ras-related protein Rab-14 [Sus scrofa]
gi|159906373|gb|ABX10875.1| RAB14 [Capra hircus]
Length = 215
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKILV-PGPAQE 214
P++ G ++ P P +E
Sbjct: 190 VQHKPSAPQGGRLTSEPQPQRE 211
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 134/217 (61%), Gaps = 18/217 (8%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYDI+RR +F+H+ WLE+ R H++ N+VI+LIGNKSDLE
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEI--------FNIVNKKN- 186
+R V E+ + FA++ GL F+ETSA A NVE AF+ EI F+I N+ N
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANG 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ G +P S G L + SS CC
Sbjct: 185 IKLGPQHSPSSPNSPGGNPAL---------SGSSNCC 212
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK++LIG+S VGKS +L RF+ + ++ D +TIGV+F+ +T+ + K+VK QI
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+R +TS+YYRG+ G ++VYD++ + SFD + WL+E+ +A ++ +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDRYATSTVLKLLVGN 121
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL ++R V + AKEFA + FLETSAL++TNVE AF+T+ +I + ++ L G
Sbjct: 122 KCDLNDKRVVEYDVAKEFADANNMPFLETSALDSTNVEEAFLTMARQIKESMAQQKLQNG 181
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
GN + K + + G Q + +SS CC
Sbjct: 182 ANGQAGNNQQNANKNVNLNG--QSLTNQSSGCC 212
>gi|74026032|ref|XP_829582.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834968|gb|EAN80470.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 212
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 134/202 (66%), Gaps = 9/202 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q+ YVFK ++IGDS VGKS +L +F F TIGVEF R + I+ K++K QIW
Sbjct: 2 QQHHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIW 61
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQE +R++T +YYRGA GA+LVYD++RR +F H+ WLE+ RS+A+ IVI+LIGNK
Sbjct: 62 DTAGQESFRSITRSYYRGACGALLVYDVTRRDTFTHLQTWLEDARSNANTAIVIMLIGNK 121
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DLE++R V E+ + FA+K L F+ETSA A NV++AF+ I++ V L AG
Sbjct: 122 CDLEKKREVSREEGEAFARKHNLVFMETSAKTAQNVDDAFLKTAAMIYDNVESGVLDAG- 180
Query: 192 GQGNGNPASLSGKKILVPGPAQ 213
++SGK+ PG A+
Sbjct: 181 --------AVSGKQGTGPGVAR 194
>gi|261335598|emb|CBH18592.1| ras-related protein rab-2a, putative [Trypanosoma brucei gambiense
DAL972]
Length = 212
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 134/202 (66%), Gaps = 9/202 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q+ YVFK ++IGDS VGKS +L +F F TIGVEF R + I+ K++K QIW
Sbjct: 2 QQHHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIW 61
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQE +R++T +YYRGA GA+LVYD++RR +F H+ WLE+ RS+A+ IVI+LIGNK
Sbjct: 62 DTAGQESFRSITRSYYRGACGALLVYDVTRRDTFTHLQTWLEDARSNANTAIVIMLIGNK 121
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DLE++R V E+ + FA+K L F+ETSA A NV++AF+ I++ V L AG
Sbjct: 122 CDLEKKREVSREEGEAFARKHNLVFMETSAKTAQNVDDAFLKTAAMIYDNVESGVLDAG- 180
Query: 192 GQGNGNPASLSGKKILVPGPAQ 213
++SGK+ PG A+
Sbjct: 181 --------AVSGKQGTGPGVAR 194
>gi|297790260|ref|XP_002863031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308833|gb|EFH39290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 108/129 (83%)
Query: 57 RTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELR 116
R + ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR
Sbjct: 2 RVITVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 61
Query: 117 SHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLT 176
HAD NIVI++ GNK+DL R+V ED + A+ EGL FLETSALEATNVE AF TVL
Sbjct: 62 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 121
Query: 177 EIFNIVNKK 185
EI++I++KK
Sbjct: 122 EIYHIISKK 130
>gi|387017952|gb|AFJ51094.1| ras-related protein Rab-14-like [Crotalus adamanteus]
Length = 215
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKIL-VPGPAQE 214
P++ G ++ P P +E
Sbjct: 190 VQHKPSAPQGGRLTNEPQPQRE 211
>gi|449269091|gb|EMC79900.1| Ras-related protein Rab-14, partial [Columba livia]
Length = 212
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIGNK+DLE
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK--NLTAGEGQ 193
QR V E+AK+FA++ GL FLE SA NVE+AF+ +I+ + +L A E
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESG 189
Query: 194 GNGNPASLSGKKILV-PGPAQE 214
P++ G ++ P P +E
Sbjct: 190 VQHKPSAPQGGRLTSEPQPQRE 211
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 4/208 (1%)
Query: 16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAG 75
Y+FK ++IGD+ VGKS +L +F F + TIGVEF R + I + VK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIWDTAG 64
Query: 76 QERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLE 135
QE +R++T +YYRGA GA+LVYD++RR++F+H+ RWLEE R +A+ +V++LIGNKSDLE
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDVTRRETFNHLTRWLEEARHNANTEMVVMLIGNKSDLE 124
Query: 136 EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQGN 195
+RAV T++ +FA + GL F+ETSA A NVE AF+ +I+ + K
Sbjct: 125 HRRAVSTKEGADFAARNGLIFMETSAKTARNVEGAFIQTAHKIYENIQKGVYDVTNDSHG 184
Query: 196 GNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ S VPG A + ++ CC
Sbjct: 185 IKVGAHSSSAASVPGAA----SGTAGCC 208
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 141/213 (66%), Gaps = 14/213 (6%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK++LIGDS VGKS +L RFA +++S TIGV+F+ RT+ + K+VK QI
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+R +TS+YYRGA G ++VYD++ SF+++ WL E+ +A++N+V +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKTWLHEIDRYANENVVKLLVGN 121
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL ++ V E AKEFA G+ F+ETSA +TNVE AFMT+ EI +KN +
Sbjct: 122 KADLTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIM----QKNASVQ 177
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G P +VP A++ +S CC
Sbjct: 178 SGPKGAKPT-------VVPSAAKK---ESKGCC 200
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 123/165 (74%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D + K++++GDS VGK+ ++ RFA+ +F DSK T+GVEF R + I K++KAQ+WDTA
Sbjct: 8 DILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQVWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQE++RA+T YYRGA+GAM+ YDI++ QSF ++ RW+EELR H D N+V++LIG KSDL
Sbjct: 68 GQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGTKSDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
E +R V ED + A + + FLETSAL+A NV AF +L +I+
Sbjct: 128 ESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIY 172
>gi|38224671|gb|AAR14147.1| Rab2B [Trypanosoma brucei]
Length = 212
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 134/202 (66%), Gaps = 9/202 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q+ YVFK ++IGDS VGKS +L +F F TIGVEF R + I+ K++K QIW
Sbjct: 2 QQHHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIW 61
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQE +R++T +YYRGA GA+LVYD++RR +F H+ WLE+ RS+A+ IVI+LIGNK
Sbjct: 62 DTAGQESFRSITRSYYRGACGALLVYDVTRRDTFTHLQTWLEDARSNANTAIVIMLIGNK 121
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
DLE++R V E+ + FA+K L F+ETSA A NV++AF+ I++ V L AG
Sbjct: 122 RDLEKKREVSREEGEAFARKHNLVFMETSAKTAQNVDDAFLKTAAMIYDNVESGVLDAG- 180
Query: 192 GQGNGNPASLSGKKILVPGPAQ 213
++SGK+ PG A+
Sbjct: 181 --------AVSGKQGTGPGVAR 194
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 140/213 (65%), Gaps = 11/213 (5%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
N + DY+FK++LIGDS VGKS +L RFA + ++ +TIGV+F+ RT+ + K++K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL+E+ +A +N+ +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K DL ++ V AKEFA G+ FLETSA ATNVE AFMT+ EI KK + G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPG 176
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G ++ L PG + S CC
Sbjct: 177 ATAGGGEKPNVK----LTPGTT--VKTSSGGCC 203
>gi|413944912|gb|AFW77561.1| hypothetical protein ZEAMMB73_916842 [Zea mays]
Length = 162
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 117/162 (72%), Gaps = 3/162 (1%)
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSFD++ RWL ELR HAD +I
Sbjct: 4 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSI 63
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+++GNKSDL RA+ ++ K A+KEGLFFLETSA+EA NVE AF T++TE++ IVN
Sbjct: 64 VIMMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVN 123
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+K L A E GK I + A CC T
Sbjct: 124 RKALAAKEAAAATASLPSQGKIISIDSTAGNTK---RACCST 162
>gi|357496971|ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatula]
gi|355493789|gb|AES74992.1| Small GTP-binding protein [Medicago truncatula]
Length = 211
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%), Gaps = 5/196 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK ++IGD+ VGKS +L +F F TIGVEF R L I + +K QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIWDTA 63
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R HA+ N+ I LIGNK DL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTITLIGNKCDL 123
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN-----IVNKKNLTA 189
+RAV E+ ++FA++ GL F+E SA A NVE AF+ +I + + N T
Sbjct: 124 SHRRAVSKEEGEQFAKENGLLFMEASAKTAQNVEEAFIKTAAKILQNIQDGVFDVSNETC 183
Query: 190 GEGQGNGNPASLSGKK 205
G G G P +G +
Sbjct: 184 GIKVGYGRPQGQAGGR 199
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,366,778,016
Number of Sequences: 23463169
Number of extensions: 127758219
Number of successful extensions: 423788
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16842
Number of HSP's successfully gapped in prelim test: 8026
Number of HSP's that attempted gapping in prelim test: 386670
Number of HSP's gapped (non-prelim): 25836
length of query: 225
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 88
effective length of database: 9,144,741,214
effective search space: 804737226832
effective search space used: 804737226832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)