BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027292
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/224 (87%), Positives = 211/224 (94%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASGGGYGD N KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLV
Sbjct: 1 MASGGGYGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNK DL QR VPTEDAKEFA+KEGLFFLETSALEATNVE+AF TVLTEI+N
Sbjct: 121 KNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
IVNKK+L A E QGNGN ASLSG+KI++PGPAQEIPAK +MCC+
Sbjct: 181 IVNKKSLAADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQ 224
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/226 (86%), Positives = 210/226 (92%), Gaps = 1/226 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
M SGGGYGDP+QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLV
Sbjct: 1 MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLV 60
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
I HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI+RRQ+FDHIPRWLEELR+HAD
Sbjct: 61 IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHAD 120
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
KNIVIILIGNKSDL +QRA+PTEDAKEFA+KEGLFFLETSA ATNVE+AF TVLTEIFN
Sbjct: 121 KNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFN 180
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKI-LVPGPAQEIPAKSSMCCRT 225
IVNKK+L A E Q NGNP SL+GKKI +VPGP Q IP KS+MCC +
Sbjct: 181 IVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/222 (86%), Positives = 209/222 (94%), Gaps = 2/222 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASG YGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1 MASG--YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLA 58
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHAD 118
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+NIVI+LIGNK+DLE+QRAVPTEDAKEFAQKEGLFFLETSA+EATN+E+AF+TVLTEIFN
Sbjct: 119 RNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFN 178
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IVNKKNL A + Q NGNPASL+GKKILVPGP Q IP K + C
Sbjct: 179 IVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACC 220
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/222 (86%), Positives = 207/222 (93%), Gaps = 2/222 (0%)
Query: 1 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
MASG YGD +QKIDYVFKVVLIGDSAVGK+QILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1 MASG--YGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLV 58
Query: 61 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHAD 120
IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD
Sbjct: 59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHAD 118
Query: 121 KNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN 180
+NIVI+L GNK+DLE+QRAVPTEDAKEFAQKEGLFFLETSA+EAT +E+AF+TVLTEIFN
Sbjct: 119 RNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFN 178
Query: 181 IVNKKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IVNKKNL A E Q N NPASL+GKKILVPGP Q IP K + C
Sbjct: 179 IVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACC 220
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/211 (82%), Positives = 197/211 (93%), Gaps = 2/211 (0%)
Query: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL I+ KS+KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 73 TAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKS 132
TAGQERYRAVTSAYYRGAVGAMLVYD+++R++F+HIPRWLEELR+HADKNIVIILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 133 DLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEG 192
DLE+QRAVPTEDAKEFA+KEGLFFLETSAL ATNVEN+F T++T+I+N VNKKNL A EG
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNL-ASEG 191
Query: 193 QGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N NP SL+GKKIL+PG QEIPAK+S CC
Sbjct: 192 DSN-NPGSLAGKKILIPGSGQEIPAKTSTCC 221
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/224 (76%), Positives = 192/224 (85%), Gaps = 2/224 (0%)
Query: 1 MASGGG-YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 59
M+ GGG YG+ QKIDYVFKVVLIGDSAVGKSQ+LARFARNEF+LDSKATIGVEFQTRTL
Sbjct: 1 MSRGGGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTL 60
Query: 60 VIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHA 119
I ++VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HA
Sbjct: 61 HIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHA 120
Query: 120 DKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIF 179
DKNIVI+LIGNKSDL R VPTEDAKEFA++E LFF+ETSALE+TNVENAFMTVLTEI+
Sbjct: 121 DKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIY 180
Query: 180 NIVNKKNLTAGEG-QGNGNPASLSGKKILVPGPAQEIPAKSSMC 222
IV+KKNL A E +GN + L G KI+VPG P K+S C
Sbjct: 181 RIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCC 224
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 342 bits (877), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 190/217 (87%), Gaps = 2/217 (0%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
YGD NQKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TLVI +K+V
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQSFDH+ +WLEELR HADKNIVI+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 124
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSALEATNVE AF+T+LTEI+ I++KK+
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 184
Query: 187 LTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
LTA + +GN + L G +I++ P+++ K CC
Sbjct: 185 LTADDDDADGNSSLLKGTRIII--PSEQESGKRGGCC 219
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 332 bits (851), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/216 (74%), Positives = 186/216 (86%), Gaps = 3/216 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEFS++SKATIGVEFQTRTL I K++KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HADKNIVI+LIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
K+DL RAVPTEDAKEFAQ+E LFF+ETSAL++ NVE +F+TVLTEI+ IV+KKNL A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 191 -EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
EG+ G+ + L G KI+V G +E +K CC T
Sbjct: 189 EEGESGGDSSLLQGTKIVVAG--EETESKGKGCCGT 222
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/185 (68%), Positives = 154/185 (83%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL+ RAV ED + A+KEGL FLETSALEA N+E AF T+LTEI++I++KK L A
Sbjct: 126 KSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 191 EGQGN 195
E N
Sbjct: 186 EASSN 190
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 271 bits (694), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 163/221 (73%), Gaps = 18/221 (8%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL R+V ED + A+KEGL FLETSALEATN+E AF T+L+EI++I++KK L A
Sbjct: 126 KSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
E GN +PG I S CC T
Sbjct: 186 EAAGN------------LPGQGTAINISDSSATNRKGCCST 214
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 271 bits (694), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 164/209 (78%), Gaps = 7/209 (3%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL ELR H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV TEDAK FA+ E L+F+ETSALE+TNVENAF VLT+I+++V+KK + AGE G
Sbjct: 131 RHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGEDSG 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N P+ G+KI V A K + CC
Sbjct: 191 NV-PS--KGEKIDVDVSA----VKKTGCC 212
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 271 bits (693), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 170/214 (79%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL+ RAV TEDA+ +A+KEGL F+ETSALEA NVE AF T+L+E++ I++KK++++
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+ N N G+ I V ++ K CC
Sbjct: 185 DQTTANANIK--EGQTIDVAATSESNAKKP--CC 214
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 270 bits (690), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 161/221 (72%), Gaps = 16/221 (7%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL RAV +D ++KEGL FLETSALEATN+E AF T+LTEI++IV+KK L A
Sbjct: 126 KSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSM------CCRT 225
E + VPG I + CC T
Sbjct: 186 EATAGAS----------VPGQGTTINVADTSGNTKKGCCST 216
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 269 bits (687), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 171/222 (77%), Gaps = 6/222 (2%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
GGY + + DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T+TL + K
Sbjct: 2 GGY-RTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++ RWL+ELR H D NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
++LIGNKSDL AVPTED K FA++E L+F+ETSALEATNVENAF VLT+I+ IV+K
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180
Query: 185 KNLTAGE-GQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ + AG+ G +G P+ G+ I V + + K CC T
Sbjct: 181 RAVEAGDSGSSSGLPS--KGQTINVKEDSSVL--KRFGCCST 218
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 267 bits (683), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 164/209 (78%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL + K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++RR +F+++ RWL+EL++H D NIV++L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AVPTED K +A++E L F+ETSALEATNVE+AF VLT+I+ I +KK + AGE
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGE--- 187
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+GN + G+KI V + K CC
Sbjct: 188 DGNASVPKGEKIEVKNDVSAL--KKLGCC 214
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 266 bits (680), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK+VLIGDS VGKS +L+RF RNEFS++SK+TIGVEF TR++ + K +KAQ+WDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYDI+R +F+++ RWL+ELR H D N+VI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE+A+ F+++E +FF+ETSAL+ATNVE AF VLT+I+ ++++K L G
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKAL-----DG 185
Query: 195 NGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+P SL + + G ++ A KSS CC
Sbjct: 186 TGDPMSLPKGQTIDIGNKDDVTAVKSSGCC 215
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 164/209 (78%), Gaps = 5/209 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L + K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIV++L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
AV T++ K FA++E L+F+ETSALE+TNVENAF VLT+I+ IV+K+++ AG+ G
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAG 191
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+G P G+KI + + K CC
Sbjct: 192 SG-PG--KGEKINIKDDVSAV--KKGGCC 215
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L ++ K++K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSFD++ RWL ELR HAD +IVI++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAV ++ K A+KEGLFFLETSA+EA NVE AF T++TE++ IVN+K L
Sbjct: 123 VGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKAL 182
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
A E P GK I + A CC
Sbjct: 183 AAKEAAAASAPLPSQGKTISIDSAAGNTK---RACC 215
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 264 bits (674), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 164/220 (74%), Gaps = 6/220 (2%)
Query: 4 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
GGY DY+FK+VLIGDS VGKS +L+RF+RNEF+L+SK+TIGVEF TR++ +
Sbjct: 2 AGGYR-AEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDD 60
Query: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNI 123
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI+R +F+++ RWL+ELR H D+NI
Sbjct: 61 KIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNI 120
Query: 124 VIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVN 183
VI+L+GNK+DL RAV TEDAK FA++E FF+ETSALE+ NVENAF VLTEI+ +V
Sbjct: 121 VIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVC 180
Query: 184 KKNLTAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
+K L G+ +PA+L + + G K CC
Sbjct: 181 RKALEVGD-----DPAALPKGQTINVGKDDVSAVKKVGCC 215
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 264 bits (674), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 164/215 (76%), Gaps = 6/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+ +G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E FF+ETSALE+ NVENAF VL++I+ +V++K L
Sbjct: 126 NKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPA-KSSMCC 223
G+ +PA+L + + G ++ A K CC
Sbjct: 186 GD-----DPAALPKGQTINVGSKDDVSAVKKVGCC 215
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 263 bits (671), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 149/175 (85%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+Q+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRT ++ K++KAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
KSDL R+V ED + A+KEGL FLETSALEATNVE AF T+L EI++I++KK
Sbjct: 126 KSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 170/220 (77%), Gaps = 3/220 (1%)
Query: 7 YGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Y + ++ DY+FK+VLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 4 YSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEI 63
Query: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVII 126
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDISRRQ+F I RWL EL +H+D N+V I
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTI 123
Query: 127 LIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKN 186
L+GNKSDL++ R V T + K A+ +GLFF+ETSAL+++NV AF TV+ EI+NI+++K
Sbjct: 124 LVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 187 LTAGEGQGNGNPASLS-GKKILVPGPAQEIPAKSSMCCRT 225
+++ E +PASLS GKK+++P Q K CC +
Sbjct: 184 MSSQE-LNKQDPASLSNGKKVVIPSDGQG-EFKKGGCCSS 221
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/174 (69%), Positives = 147/174 (84%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Q DY+FK+VLIGDS VGK+ IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 7 QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
+DL R+V ED + A+ EGL FLETSALEATNVE AF TVL EI++I++KK
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 169/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KMQCCQ 214
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ + DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L + K +KAQ
Sbjct: 6 ADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ WL+ELR+H D NIV++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL AV TEDAK FA+KE L+F+ETSALEATNVENAF VLT+I +IV+KK + A
Sbjct: 126 NKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEA 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
N P+ G KI + + K CC
Sbjct: 186 ASESANV-PS--KGDKIDIGKDVSAV--KKGGCC 214
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 260 bits (665), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 165/215 (76%), Gaps = 5/215 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
P+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K++KAQ
Sbjct: 5 PDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQ 64
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +F+++ RWL+ELR HAD NIVI+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVG 124
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NKSDL+ R V TE A+ F ++EGL F+ETSALE+TNVE AF +LTEI++IV+KK L +
Sbjct: 125 NKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDS 184
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSS-MCC 223
+ + P G+ ++V A + K CC
Sbjct: 185 EDNR----PKIGEGRDVIVIDNAHDDGGKKKGGCC 215
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 260 bits (664), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 157/211 (74%), Gaps = 3/211 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL GDS VGKS +L+RF RN+FS DS++TIGVEF TR++ + K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D N VI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RA+ TE+ K+FA++E FF+ETSALEA NVENAF VLT+I+ +V+KK L AG+
Sbjct: 131 NHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPT 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
P G+ I V K S CC T
Sbjct: 191 TALP---KGQMINVGSRDDVSAVKKSGCCAT 218
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 156/209 (74%), Gaps = 3/209 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FKVVL GDS VGKS +L+RF RN+FS DS+ATIGVEF TR++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RA+ TE+AK FA++E FF+ETSALEA NV+NAF VLT+I+ +V+KK L AG+
Sbjct: 131 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 190
Query: 195 NGNPASLSGKKILVPGPAQEIPAKSSMCC 223
P G+ I V G K CC
Sbjct: 191 TALP---KGQMINVGGRDDISAVKKPGCC 216
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 258 bits (660), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 167/217 (76%), Gaps = 4/217 (1%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K GL F+ETSAL+ TNVE AF T+LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM 181
Query: 188 TAGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + N S + I VP + P CC+
Sbjct: 182 S--DRRENDMSPSNNVVPIHVPPTTENKP--KVQCCQ 214
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 257 bits (657), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 164/211 (77%), Gaps = 6/211 (2%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
DY+FK VLIGDS VGKS +L RF RNEF+++SK+TIGVEF TR +V+ +K +KAQIWDTA
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDI+++ SFD++ RWL+ELR HAD NIVI+L+GNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDL 127
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAV TE+A+ FA + L F+ETSA++A+NVE AF TVLTEIF IV+ ++L AG+
Sbjct: 128 LHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGD--D 185
Query: 195 NGNPASLSGKKILVPGPAQEIPAK--SSMCC 223
+P +G+ + + ++ K SS CC
Sbjct: 186 GVHPT--AGQTLNIAPTMNDLNKKKSSSQCC 214
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 256 bits (653), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 147/175 (84%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+L YDI++RQ+FD++ RWL ELR H D NIVIIL GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGN 125
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKK 185
KSDL+ RAV +D + +KEGL FLETSALEA NV+ AF T+LT+I++I++KK
Sbjct: 126 KSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 164/219 (74%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
+ + + GN I VP + CC+
Sbjct: 182 SDRSAHDESPGNNVV----DISVPPTTDGQKSNKLQCCQ 216
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 165/215 (76%), Gaps = 3/215 (1%)
Query: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
+ + DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T++L I +K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQI 66
Query: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGN 130
WDTAGQERYRA+TSAYYRGAVGA+LVYD++R +++++ RWL+ELR H D NIV++LIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGN 126
Query: 131 KSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAG 190
KSDL AV T++AK A++EGL+F+ETSALEATNVENAF LT+I+ IV+KK + AG
Sbjct: 127 KSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAG 186
Query: 191 EGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
+ +G + A G+ I + K CC +
Sbjct: 187 D-EGATSSAPPKGETINIKDEGS--SWKKFGCCSS 218
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+ D+++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQ
Sbjct: 6 ADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+++ RWL+ELR H + NIVI+L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK+DL RAV TEDAK FA++E FF+ETSALEA NVENAF VL++I+ + +KK L
Sbjct: 126 NKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDI 185
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G+ G+ I V K CC
Sbjct: 186 GDDH----TTLPKGQSINVGSKDDVSEVKKVGCC 215
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 254 bits (649), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 151/187 (80%), Gaps = 1/187 (0%)
Query: 5 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
GY + + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I K
Sbjct: 2 AGY-KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIV 124
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R +F+ RWL+ELR H D NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 125 IILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNK 184
++LIGNKSDL V TED K FA+KE L+F+ETSALEATNVENAF VLT+I+ IV+K
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 185 KNLTAGE 191
+ + AG+
Sbjct: 181 RAVEAGD 187
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 162/219 (73%), Gaps = 6/219 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCR 224
A + GN I VP CC+
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQKPNKLQCCQ 216
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 163/220 (74%), Gaps = 6/220 (2%)
Query: 8 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIIL 127
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 128 IGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNL 187
+GNKSDL RAVPT++A+ FA+K L F+ETSAL++TNVE AF +LTEI+ IV++K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 188 T--AGEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCCRT 225
A + GN I VP CC++
Sbjct: 182 ADRAAHDESPGNNVV----DISVPPTTDGQRPNKLQCCQS 217
>sp|Q9LNK1|RABA3_ARATH Ras-related protein RABA3 OS=Arabidopsis thaliana GN=RABA3 PE=2
SV=1
Length = 237
Score = 253 bits (646), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 166/219 (75%), Gaps = 11/219 (5%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
+KIDYVFKVV+IGDSAVGK+Q+L+RF NEF DSK+TIGVEFQTRT+ ++ K VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIW 82
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRAVTSAYYRGA+GAM+VYDI++R SFDH+ RW+EELR+HAD + VI+L+GNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 132 SDLE-EQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFN--IVNKKNLT 188
+DL +RAVPTEDA EFA+ + LFF E SAL NV+ AF +L EIF+ +V++K
Sbjct: 143 ADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRK--- 199
Query: 189 AGEGQGNGNPASLSGKKI-LVPGPAQE---IPAKSSMCC 223
A E G G L G +I ++ G E I ++S C
Sbjct: 200 AMESDG-GATVKLDGSRIDVISGSDLETSNIKEQASCSC 237
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 253 bits (646), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 10 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
+++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T+T ++ K VKAQ
Sbjct: 6 ADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQ 65
Query: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIG 129
IWDTAGQERYRA+TSAYYRGAVGA+L+YD++R +F++ RWL ELR H D NIV++LIG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIG 125
Query: 130 NKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTA 189
NK DL AV TE+AK FA++E L+F+ETSAL+ATNVENAF VLT+I IV+K+++
Sbjct: 126 NKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSV-- 183
Query: 190 GEGQGNGNPASLSGKKILVPGPAQEIPAKSSMCC 223
G G A L GK + K CC
Sbjct: 184 ---DGGGESADLPGKGETINVKEDGSVLKRMGCC 214
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 151/213 (70%), Gaps = 4/213 (1%)
Query: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I K +KAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 75 GQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNKSDL 134
GQERYRA+TSAYYRGAVGA++VYDIS+ S+++ WL ELR +AD N+ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 135 EEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGEGQG 194
RAVPTE++K FAQ+ L F ETSAL + NV+ AF ++ I+ V+K + G+
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 195 NGNPASLS---GKKI-LVPGPAQEIPAKSSMCC 223
NGN S G I L P P + A + CC
Sbjct: 191 NGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 162/214 (75%), Gaps = 9/214 (4%)
Query: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
++ DY++K+VLIGDS VGKS +L+RF RNEFSL++K+TIGVEF TRT+ + K++KAQ+W
Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 67
Query: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGNK 131
DTAGQERYRA+TSAYYRGAVGA+LVYDI+++ ++ + RW+ ELR +AD+NI I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNK 127
Query: 132 SDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVLTEIFNIVNKKNLTAGE 191
SDL R V T++AKEF++K L F+ETSAL+++NVE AF +LT+I++I+++ + + G
Sbjct: 128 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG- 186
Query: 192 GQGNGNPASL--SGKKILVPGPAQEIPAKSSMCC 223
P + S + ++ E PA S CC
Sbjct: 187 ------PQTTIDSNTETIILPTTSEPPAAKSGCC 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,220,177
Number of Sequences: 539616
Number of extensions: 3081612
Number of successful extensions: 12674
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 10838
Number of HSP's gapped (non-prelim): 1229
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)