Query 027296
Match_columns 225
No_of_seqs 57 out of 59
Neff 2.0
Searched_HMMs 29240
Date Mon Mar 25 12:43:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3maj_A DNA processing chain A; 97.6 0.00031 1.1E-08 63.7 10.0 78 140-221 127-205 (382)
2 2iz6_A Molybdenum cofactor car 97.6 0.00025 8.6E-09 57.5 8.1 65 139-205 12-79 (176)
3 1t35_A Hypothetical protein YV 97.3 0.0007 2.4E-08 54.9 7.8 65 141-207 2-69 (191)
4 3qua_A Putative uncharacterize 97.3 0.00085 2.9E-08 55.6 8.3 68 138-207 20-89 (199)
5 2a33_A Hypothetical protein; s 97.3 0.00049 1.7E-08 57.2 6.9 69 138-208 11-82 (215)
6 1wek_A Hypothetical protein TT 97.3 0.00096 3.3E-08 55.5 8.3 59 135-193 32-92 (217)
7 1weh_A Conserved hypothetical 97.2 0.0005 1.7E-08 54.8 6.1 62 141-204 2-65 (171)
8 3uqz_A DNA processing protein 97.1 0.0018 6.2E-08 56.9 8.6 79 140-222 106-186 (288)
9 1rcu_A Conserved hypothetical 97.0 0.0022 7.7E-08 52.8 7.7 63 140-204 23-90 (195)
10 3sbx_A Putative uncharacterize 97.0 0.0028 9.4E-08 52.2 8.1 71 135-207 8-80 (189)
11 1ydh_A AT5G11950; structural g 96.7 0.0049 1.7E-07 51.3 7.7 66 139-206 8-76 (216)
12 2nx2_A Hypothetical protein YP 94.0 0.4 1.4E-05 38.6 9.5 80 141-221 3-100 (181)
13 3gh1_A Predicted nucleotide-bi 93.8 0.23 7.8E-06 46.8 8.8 73 137-210 144-223 (462)
14 3bq9_A Predicted rossmann fold 93.0 0.4 1.4E-05 45.0 9.1 68 138-206 143-216 (460)
15 1j0a_A 1-aminocyclopropane-1-c 66.3 20 0.0007 29.7 7.4 63 154-218 54-116 (325)
16 3iix_A Biotin synthetase, puta 65.6 53 0.0018 26.7 10.1 82 127-216 88-170 (348)
17 3nra_A Aspartate aminotransfer 60.9 5.3 0.00018 31.9 2.8 38 153-190 82-123 (407)
18 1tv8_A MOAA, molybdenum cofact 58.4 29 0.001 28.4 6.9 41 128-170 55-95 (340)
19 3g7q_A Valine-pyruvate aminotr 57.6 7.9 0.00027 31.1 3.3 35 169-203 98-133 (417)
20 3h14_A Aminotransferase, class 55.0 6.8 0.00023 31.4 2.5 23 169-191 91-113 (391)
21 3kax_A Aminotransferase, class 52.5 12 0.0004 29.6 3.4 19 171-189 84-102 (383)
22 2dr1_A PH1308 protein, 386AA l 51.6 8.9 0.0003 30.2 2.6 21 156-176 81-101 (386)
23 4dq6_A Putative pyridoxal phos 51.3 12 0.00041 29.6 3.4 19 171-189 92-110 (391)
24 4aec_A Cysteine synthase, mito 50.4 27 0.00091 31.6 5.9 54 7-73 41-94 (430)
25 2bkw_A Alanine-glyoxylate amin 50.1 13 0.00045 29.2 3.4 17 157-173 70-89 (385)
26 3dzz_A Putative pyridoxal 5'-p 49.9 17 0.00058 28.7 4.0 21 170-190 86-106 (391)
27 3mc6_A Sphingosine-1-phosphate 49.4 15 0.00052 30.9 3.9 38 154-191 108-148 (497)
28 3ezs_A Aminotransferase ASPB; 49.1 17 0.00059 28.7 4.0 20 156-175 92-113 (376)
29 4hvk_A Probable cysteine desul 48.0 13 0.00043 28.9 3.0 21 156-176 70-94 (382)
30 1svv_A Threonine aldolase; str 48.0 12 0.00041 29.0 2.8 21 156-176 76-96 (359)
31 4eb5_A Probable cysteine desul 47.9 16 0.00055 28.6 3.6 17 173-189 64-80 (382)
32 3kgw_A Alanine-glyoxylate amin 47.7 25 0.00086 27.5 4.7 18 159-176 87-104 (393)
33 1iug_A Putative aspartate amin 47.4 12 0.00042 28.9 2.8 18 172-189 54-71 (352)
34 3vax_A Putative uncharacterize 46.7 12 0.00043 29.7 2.8 20 171-190 82-101 (400)
35 2z9v_A Aspartate aminotransfer 46.0 14 0.00048 29.3 3.0 21 156-176 69-89 (392)
36 1r30_A Biotin synthase; SAM ra 45.7 62 0.0021 27.1 7.1 63 127-192 103-168 (369)
37 1vjo_A Alanine--glyoxylate ami 45.6 14 0.00048 29.4 3.0 21 156-176 95-115 (393)
38 1c7n_A Cystalysin; transferase 45.5 14 0.00047 29.6 2.9 20 171-190 91-110 (399)
39 1eg5_A Aminotransferase; PLP-d 44.8 21 0.00072 27.9 3.8 20 171-190 63-82 (384)
40 2huf_A Alanine glyoxylate amin 44.3 15 0.00052 29.1 2.9 21 156-176 80-100 (393)
41 2q5c_A NTRC family transcripti 43.4 29 0.00099 27.5 4.5 58 126-184 81-156 (196)
42 2c0r_A PSAT, phosphoserine ami 43.4 10 0.00035 30.0 1.9 17 174-190 73-89 (362)
43 3f9t_A TDC, L-tyrosine decarbo 42.7 25 0.00086 27.4 3.9 19 173-191 90-108 (397)
44 3c8f_A Pyruvate formate-lyase 42.1 55 0.0019 24.4 5.6 47 128-177 55-107 (245)
45 2ch1_A 3-hydroxykynurenine tra 41.2 22 0.00074 28.3 3.4 43 128-176 56-99 (396)
46 1kmj_A Selenocysteine lyase; p 41.1 17 0.00059 28.6 2.8 20 170-189 86-105 (406)
47 3ele_A Amino transferase; RER0 40.6 17 0.00058 29.1 2.7 19 171-189 101-119 (398)
48 2fnu_A Aminotransferase; prote 40.5 22 0.00074 27.9 3.2 34 155-189 34-67 (375)
49 2zc0_A Alanine glyoxylate tran 40.5 12 0.00043 30.0 1.9 20 156-175 108-127 (407)
50 3qm2_A Phosphoserine aminotran 40.4 31 0.0011 29.7 4.5 36 157-192 76-114 (386)
51 2dgk_A GAD-beta, GADB, glutama 40.2 27 0.00091 29.3 4.0 38 154-191 82-125 (452)
52 1j32_A Aspartate aminotransfer 40.1 13 0.00046 29.6 2.0 21 156-176 100-120 (388)
53 2e7j_A SEP-tRNA:Cys-tRNA synth 39.5 14 0.00049 28.9 2.1 21 156-176 79-99 (371)
54 3hdo_A Histidinol-phosphate am 39.2 29 0.001 27.5 3.9 36 156-191 68-104 (360)
55 1sff_A 4-aminobutyrate aminotr 38.6 15 0.00052 29.7 2.2 9 128-136 89-97 (426)
56 3frk_A QDTB; aminotransferase, 38.1 22 0.00076 28.4 3.0 34 155-189 38-71 (373)
57 2is8_A Molybdopterin biosynthe 38.0 26 0.0009 26.8 3.3 33 150-182 42-75 (164)
58 3euc_A Histidinol-phosphate am 37.7 17 0.00058 28.8 2.2 19 171-189 87-105 (367)
59 3ffh_A Histidinol-phosphate am 37.5 21 0.00072 28.2 2.8 43 128-176 72-114 (363)
60 3t18_A Aminotransferase class 37.4 22 0.00074 28.8 2.9 53 119-177 74-132 (413)
61 2g2c_A Putative molybdenum cof 37.2 28 0.00097 26.7 3.4 32 151-182 51-82 (167)
62 1mkz_A Molybdenum cofactor bio 37.1 27 0.00091 27.2 3.3 50 128-182 32-82 (172)
63 3dyd_A Tyrosine aminotransfera 36.9 19 0.00065 29.8 2.5 21 170-190 119-139 (427)
64 2rfv_A Methionine gamma-lyase; 36.7 34 0.0012 27.9 4.0 20 157-176 90-109 (398)
65 3lvm_A Cysteine desulfurase; s 36.6 29 0.00099 27.9 3.5 43 128-176 73-119 (423)
66 3e2y_A Kynurenine-oxoglutarate 36.5 26 0.00089 28.0 3.2 19 171-189 87-105 (410)
67 3if2_A Aminotransferase; YP_26 36.4 13 0.00045 30.5 1.5 38 155-192 85-129 (444)
68 3a2b_A Serine palmitoyltransfe 35.8 25 0.00085 28.2 3.0 36 154-190 89-124 (398)
69 2z61_A Probable aspartate amin 35.7 22 0.00076 28.2 2.7 20 156-175 99-118 (370)
70 3mad_A Sphingosine-1-phosphate 35.7 23 0.0008 30.3 3.0 39 154-192 140-183 (514)
71 1rv3_A Serine hydroxymethyltra 35.6 9.5 0.00032 33.0 0.5 20 172-192 114-133 (483)
72 3zrp_A Serine-pyruvate aminotr 35.3 21 0.00072 27.9 2.4 11 165-175 72-82 (384)
73 1b5p_A Protein (aspartate amin 35.1 17 0.00058 29.4 1.9 21 156-176 101-121 (385)
74 3hno_A Pyrophosphate-dependent 35.0 17 0.00058 33.0 2.1 18 173-191 8-27 (419)
75 3pzy_A MOG; ssgcid, seattle st 34.7 33 0.0011 26.7 3.4 28 156-183 53-80 (164)
76 3ly1_A Putative histidinol-pho 34.6 20 0.00067 28.1 2.2 21 156-176 78-98 (354)
77 1uuy_A CNX1, molybdopterin bio 34.5 30 0.001 26.5 3.2 32 151-182 52-84 (167)
78 2uyy_A N-PAC protein; long-cha 34.3 25 0.00087 28.3 2.8 45 126-177 11-60 (316)
79 1gd9_A Aspartate aminotransfer 34.3 31 0.0011 27.5 3.3 19 172-190 90-108 (389)
80 1iay_A ACC synthase 2, 1-amino 34.1 22 0.00075 29.1 2.5 45 127-177 87-139 (428)
81 1v72_A Aldolase; PLP-dependent 33.9 33 0.0011 26.5 3.3 16 173-188 63-78 (356)
82 2pbq_A Molybdenum cofactor bio 33.8 33 0.0011 26.8 3.3 51 128-182 29-81 (178)
83 3fdb_A Beta C-S lyase, putativ 33.6 26 0.00088 27.6 2.7 21 170-190 82-102 (377)
84 1d2f_A MALY protein; aminotran 33.5 24 0.00081 28.3 2.5 19 171-189 89-107 (390)
85 3rq1_A Aminotransferase class 33.4 26 0.00089 28.4 2.7 53 119-177 75-133 (418)
86 2yrr_A Aminotransferase, class 33.4 16 0.00054 28.1 1.4 12 156-167 62-73 (353)
87 3ml1_A NAPA, periplasmic nitra 33.1 65 0.0022 30.6 5.8 58 119-177 87-149 (802)
88 3nx3_A Acoat, acetylornithine 33.0 47 0.0016 26.6 4.2 40 152-192 77-116 (395)
89 2cb1_A O-acetyl homoserine sul 32.9 33 0.0011 28.4 3.4 35 155-190 58-92 (412)
90 3get_A Histidinol-phosphate am 32.8 33 0.0011 27.0 3.2 21 156-176 92-112 (365)
91 1v9v_A KIAA0561 protein; helix 32.6 12 0.00042 29.7 0.7 42 135-176 22-63 (114)
92 1m32_A 2-aminoethylphosphonate 32.6 26 0.00089 27.1 2.5 21 156-176 66-87 (366)
93 2hig_A 6-phospho-1-fructokinas 32.3 19 0.00066 33.6 2.1 19 173-192 102-122 (487)
94 3ffr_A Phosphoserine aminotran 32.1 24 0.00084 27.3 2.3 36 155-190 45-82 (362)
95 3piu_A 1-aminocyclopropane-1-c 32.0 26 0.00088 28.8 2.5 22 155-176 120-141 (435)
96 4gs5_A Acyl-COA synthetase (AM 31.6 14 0.00048 30.6 0.9 10 172-181 42-51 (358)
97 7aat_A Aspartate aminotransfer 31.6 35 0.0012 27.4 3.2 16 175-190 102-117 (401)
98 1c4k_A Protein (ornithine deca 31.5 17 0.00059 34.5 1.6 31 156-188 199-229 (730)
99 3nnk_A Ureidoglycine-glyoxylat 31.5 42 0.0014 26.6 3.6 22 156-177 74-95 (411)
100 1b9h_A AHBA synthase, protein 31.4 62 0.0021 25.8 4.6 20 157-176 64-84 (388)
101 1yiz_A Kynurenine aminotransfe 31.1 25 0.00086 28.6 2.3 21 156-176 111-131 (429)
102 2dou_A Probable N-succinyldiam 30.8 43 0.0015 26.6 3.6 21 156-176 97-117 (376)
103 2r2n_A Kynurenine/alpha-aminoa 30.7 36 0.0012 28.1 3.2 21 156-176 118-138 (425)
104 3bwn_A AT1G70560, L-tryptophan 30.6 36 0.0012 28.1 3.2 16 156-171 101-116 (391)
105 2x5d_A Probable aminotransfera 30.5 33 0.0011 27.9 2.9 20 156-175 109-128 (412)
106 3g0t_A Putative aminotransfera 30.3 30 0.001 28.0 2.6 16 156-171 115-132 (437)
107 2nap_A Protein (periplasmic ni 30.2 95 0.0032 28.3 6.2 59 119-178 75-138 (723)
108 1o69_A Aminotransferase; struc 30.2 35 0.0012 27.8 3.0 19 171-189 49-67 (394)
109 3dr4_A Putative perosamine syn 30.2 37 0.0013 27.2 3.1 42 128-177 61-103 (391)
110 3kbq_A Protein TA0487; structu 30.1 43 0.0015 26.8 3.5 48 128-183 27-76 (172)
111 3fvs_A Kynurenine--oxoglutarat 29.8 41 0.0014 27.1 3.3 20 171-190 93-112 (422)
112 3rpz_A ADP/ATP-dependent NAD(P 29.8 51 0.0017 27.9 4.1 37 169-206 30-69 (279)
113 1mdo_A ARNB aminotransferase; 29.7 34 0.0012 27.2 2.8 41 128-176 44-85 (393)
114 2o1b_A Aminotransferase, class 29.7 34 0.0011 28.0 2.8 20 156-175 119-138 (404)
115 1u08_A Hypothetical aminotrans 29.6 36 0.0012 27.1 3.0 21 156-176 101-121 (386)
116 2zyj_A Alpha-aminodipate amino 29.5 24 0.00084 28.4 2.0 21 156-176 101-121 (397)
117 3uwc_A Nucleotide-sugar aminot 29.5 31 0.001 27.2 2.5 17 159-175 66-83 (374)
118 1t3i_A Probable cysteine desul 29.4 33 0.0011 27.2 2.7 17 173-189 94-110 (420)
119 3nyt_A Aminotransferase WBPE; 29.4 37 0.0013 27.2 3.0 34 155-189 37-70 (367)
120 3dxv_A Alpha-amino-epsilon-cap 29.3 30 0.001 28.5 2.5 38 154-191 87-126 (439)
121 1sn9_A BBAT, tetrameric beta-B 29.2 28 0.00095 21.5 1.7 17 122-138 3-19 (26)
122 2raf_A Putative dinucleotide-b 29.0 1.2E+02 0.004 23.4 5.7 48 140-203 19-66 (209)
123 1v2d_A Glutamine aminotransfer 28.9 33 0.0011 27.3 2.6 20 156-175 88-107 (381)
124 2x5f_A Aspartate_tyrosine_phen 28.7 25 0.00085 28.7 1.9 21 156-176 123-143 (430)
125 3b46_A Aminotransferase BNA3; 28.6 25 0.00084 29.4 1.9 19 171-189 120-138 (447)
126 3rfq_A Pterin-4-alpha-carbinol 28.6 46 0.0016 26.8 3.4 34 150-183 70-103 (185)
127 2okj_A Glutamate decarboxylase 28.4 30 0.001 29.6 2.4 38 154-191 133-173 (504)
128 3p1t_A Putative histidinol-pho 28.3 35 0.0012 26.4 2.6 19 156-176 78-96 (337)
129 3dtt_A NADP oxidoreductase; st 28.1 46 0.0016 26.2 3.3 32 138-176 17-48 (245)
130 2bwn_A 5-aminolevulinate synth 27.8 31 0.0011 27.7 2.3 9 169-177 131-139 (401)
131 3tcm_A Alanine aminotransferas 27.6 71 0.0024 27.6 4.7 40 151-190 136-178 (500)
132 1xi9_A Putative transaminase; 27.1 28 0.00095 28.2 1.9 21 156-176 111-131 (406)
133 1y5e_A Molybdenum cofactor bio 27.1 46 0.0016 25.6 3.1 50 128-182 35-85 (169)
134 2pju_A Propionate catabolism o 26.9 53 0.0018 27.1 3.6 58 126-184 93-168 (225)
135 2o0r_A RV0858C (N-succinyldiam 26.8 30 0.001 28.0 2.1 20 156-175 96-115 (411)
136 3cai_A Possible aminotransfera 26.5 54 0.0018 26.1 3.5 20 157-176 97-119 (406)
137 3hcw_A Maltose operon transcri 26.3 1.2E+02 0.0042 23.3 5.4 36 135-170 126-161 (295)
138 1vp4_A Aminotransferase, putat 26.3 27 0.00091 28.7 1.7 20 156-175 119-138 (425)
139 1v47_A ATP sulfurylase; produc 26.2 76 0.0026 28.0 4.7 122 82-210 94-234 (349)
140 4adb_A Succinylornithine trans 26.1 46 0.0016 26.6 3.0 36 155-191 83-118 (406)
141 1elu_A L-cysteine/L-cystine C- 26.1 39 0.0013 26.5 2.6 19 171-189 78-96 (390)
142 1fg7_A Histidinol phosphate am 26.0 36 0.0012 27.3 2.4 44 128-177 63-107 (356)
143 3op7_A Aminotransferase class 25.9 15 0.00053 29.1 0.2 51 120-176 59-111 (375)
144 3m5u_A Phosphoserine aminotran 25.7 38 0.0013 29.0 2.6 19 172-190 71-90 (361)
145 1ax4_A Tryptophanase; tryptoph 25.6 45 0.0015 27.5 2.9 44 128-179 81-131 (467)
146 3ruy_A Ornithine aminotransfer 25.5 77 0.0026 25.3 4.2 37 154-191 79-115 (392)
147 3obk_A Delta-aminolevulinic ac 25.3 60 0.002 29.9 3.9 23 126-148 72-95 (356)
148 3iwt_A 178AA long hypothetical 25.3 50 0.0017 25.1 3.0 50 128-182 44-94 (178)
149 3gv0_A Transcriptional regulat 25.1 1.4E+02 0.0048 22.8 5.5 36 135-170 122-157 (288)
150 2oqx_A Tryptophanase; lyase, p 25.1 94 0.0032 25.5 4.8 17 173-189 93-109 (467)
151 3hp4_A GDSL-esterase; psychrot 24.9 1.8E+02 0.0062 20.4 5.9 31 172-202 40-74 (185)
152 1bw0_A TAT, protein (tyrosine 24.7 40 0.0014 27.2 2.4 21 156-176 114-134 (416)
153 3a9z_A Selenocysteine lyase; P 24.7 42 0.0014 27.2 2.6 36 156-191 64-100 (432)
154 4dll_A 2-hydroxy-3-oxopropiona 24.6 73 0.0025 26.2 4.0 33 137-176 28-60 (320)
155 1h7n_A 5-aminolaevulinic acid 24.5 66 0.0023 29.4 4.0 23 126-148 68-91 (342)
156 3kjj_A NMB1025 protein; YJGF p 24.5 19 0.00065 27.2 0.5 15 168-182 25-39 (128)
157 2epj_A Glutamate-1-semialdehyd 24.5 60 0.0021 26.7 3.5 36 154-189 97-132 (434)
158 3gtz_A Putative translation in 24.4 16 0.00054 27.2 -0.0 15 168-182 19-33 (124)
159 2v9d_A YAGE; dihydrodipicolini 24.4 3.4E+02 0.012 23.3 11.9 112 109-221 32-153 (343)
160 4f06_A Extracellular ligand-bi 24.4 2.7E+02 0.0094 22.3 8.5 128 89-221 143-272 (371)
161 1jg8_A L-ALLO-threonine aldola 24.4 55 0.0019 25.5 3.1 52 119-178 33-85 (347)
162 3ixl_A Amdase, arylmalonate de 24.3 2.6E+02 0.0089 22.6 7.3 43 133-180 110-152 (240)
163 1pv8_A Delta-aminolevulinic ac 24.2 70 0.0024 29.2 4.1 23 126-148 58-81 (330)
164 2gb3_A Aspartate aminotransfer 24.2 34 0.0012 27.8 1.9 21 156-176 112-132 (409)
165 1o4s_A Aspartate aminotransfer 24.1 34 0.0012 27.6 1.9 22 155-176 110-131 (389)
166 2pjk_A 178AA long hypothetical 24.0 54 0.0018 25.8 3.0 51 128-183 44-95 (178)
167 2fyf_A PSAT, phosphoserine ami 23.9 30 0.001 28.0 1.6 37 155-191 80-119 (398)
168 1gg4_A UDP-N-acetylmuramoylala 23.9 2.1E+02 0.0071 24.8 7.0 47 128-178 86-134 (452)
169 3qhx_A Cystathionine gamma-syn 23.9 54 0.0019 27.2 3.1 59 126-192 68-128 (392)
170 1l6s_A Porphobilinogen synthas 23.9 64 0.0022 29.3 3.8 23 126-148 57-80 (323)
171 1w5q_A Delta-aminolevulinic ac 23.7 69 0.0024 29.3 4.0 23 126-148 65-88 (337)
172 1jlj_A Gephyrin; globular alph 23.6 62 0.0021 25.7 3.3 32 151-182 59-91 (189)
173 2e7z_A Acetylene hydratase AHY 23.6 77 0.0026 29.0 4.3 53 119-177 74-135 (727)
174 2f48_A Diphosphate--fructose-6 23.6 34 0.0012 32.3 2.0 19 173-192 77-97 (555)
175 3ojc_A Putative aspartate/glut 23.5 41 0.0014 27.1 2.3 37 122-158 99-139 (231)
176 3k4h_A Putative transcriptiona 23.5 1.6E+02 0.0053 22.2 5.4 37 135-171 126-162 (292)
177 3n75_A LDC, lysine decarboxyla 23.4 34 0.0011 32.8 2.0 32 159-192 224-255 (715)
178 3g85_A Transcriptional regulat 23.4 1.4E+02 0.0047 22.6 5.1 37 135-171 122-158 (289)
179 2hox_A ALLIIN lyase 1; cystein 23.3 36 0.0012 28.8 2.0 35 155-189 102-143 (427)
180 2w8t_A SPT, serine palmitoyltr 23.0 42 0.0014 27.7 2.3 18 160-177 138-155 (427)
181 2c81_A Glutamine-2-deoxy-scyll 23.0 58 0.002 26.6 3.1 20 157-176 68-88 (418)
182 1di6_A MOGA, molybdenum cofact 23.0 64 0.0022 25.9 3.3 32 151-182 47-79 (195)
183 3f0h_A Aminotransferase; RER07 23.0 63 0.0021 25.4 3.2 21 156-176 81-101 (376)
184 3vp6_A Glutamate decarboxylase 22.8 46 0.0016 29.1 2.6 41 151-191 133-176 (511)
185 4dql_A Bifunctional P-450/NADP 22.8 2.1E+02 0.0073 24.8 6.8 23 128-150 258-283 (393)
186 3o8o_A 6-phosphofructokinase s 22.6 34 0.0012 33.9 1.9 18 173-191 398-417 (787)
187 3k12_A Uncharacterized protein 22.4 15 0.0005 27.3 -0.6 15 168-182 16-30 (122)
188 4huj_A Uncharacterized protein 22.4 2.2E+02 0.0076 21.8 6.2 28 141-175 24-51 (220)
189 3k9c_A Transcriptional regulat 22.4 1.5E+02 0.0051 22.7 5.2 36 135-171 121-156 (289)
190 3l8a_A METC, putative aminotra 22.1 55 0.0019 26.8 2.8 22 170-191 120-141 (421)
191 3huu_A Transcription regulator 22.0 1.6E+02 0.0053 22.7 5.2 36 135-170 139-174 (305)
192 3qk7_A Transcriptional regulat 22.0 1.5E+02 0.005 22.9 5.1 36 135-170 121-156 (294)
193 3miz_A Putative transcriptiona 22.0 1.5E+02 0.005 22.8 5.1 36 135-170 126-161 (301)
194 1jbq_A B, cystathionine beta-s 22.0 1.4E+02 0.0049 26.6 5.7 51 161-218 148-204 (435)
195 1tzj_A ACC deaminase, 1-aminoc 22.0 1.3E+02 0.0043 24.8 5.0 52 157-208 54-105 (338)
196 4gbj_A 6-phosphogluconate dehy 21.9 79 0.0027 26.1 3.7 29 140-175 5-33 (297)
197 3jtx_A Aminotransferase; NP_28 21.9 50 0.0017 26.3 2.4 15 156-170 101-115 (396)
198 3kke_A LACI family transcripti 21.7 1.6E+02 0.0056 22.7 5.3 36 135-170 126-161 (303)
199 3n5m_A Adenosylmethionine-8-am 21.6 79 0.0027 26.2 3.7 38 154-191 92-129 (452)
200 3o8l_A 6-phosphofructokinase, 21.5 37 0.0013 33.4 1.9 18 173-191 20-39 (762)
201 3mvn_A UDP-N-acetylmuramate:L- 21.5 85 0.0029 23.6 3.6 40 122-162 121-161 (163)
202 1lld_A L-lactate dehydrogenase 21.5 66 0.0023 25.8 3.1 26 139-171 6-31 (319)
203 2iv2_X Formate dehydrogenase H 21.3 1.1E+02 0.0039 27.9 5.0 58 119-177 74-137 (715)
204 3fq8_A Glutamate-1-semialdehyd 21.2 75 0.0026 25.9 3.4 38 154-191 93-130 (427)
205 2r8w_A AGR_C_1641P; APC7498, d 20.9 3.9E+02 0.013 22.8 11.2 98 109-208 35-142 (332)
206 3nyq_A Malonyl-COA ligase; A/B 20.9 32 0.0011 29.5 1.2 10 172-181 160-169 (505)
207 2rkb_A Serine dehydratase-like 20.9 2.3E+02 0.0079 23.1 6.3 59 155-218 39-97 (318)
208 3rg2_A Enterobactin synthase c 20.9 30 0.001 30.5 1.1 10 172-181 189-198 (617)
209 3cq5_A Histidinol-phosphate am 20.8 48 0.0016 26.4 2.1 21 156-176 102-122 (369)
210 1ddg_A Sulfite reductase (NADP 20.8 2.6E+02 0.0088 24.0 6.9 60 128-187 273-339 (374)
211 3r44_A Fatty acyl COA syntheta 20.8 62 0.0021 27.7 3.0 10 172-181 175-184 (517)
212 4dg8_A PA1221; ANL superfamily 20.8 32 0.0011 30.9 1.2 10 172-181 169-178 (620)
213 3opy_B 6-phosphofructo-1-kinas 20.7 38 0.0013 34.3 1.8 19 173-192 576-596 (941)
214 4fak_A Ribosomal RNA large sub 20.7 76 0.0026 25.6 3.3 58 115-172 79-159 (163)
215 3kxw_A Saframycin MX1 syntheta 20.4 32 0.0011 29.5 1.1 10 172-181 172-181 (590)
216 2vyc_A Biodegradative arginine 20.3 43 0.0015 31.6 2.0 19 158-176 233-251 (755)
217 4e1o_A HDC, histidine decarbox 20.2 52 0.0018 28.3 2.4 42 150-191 115-167 (481)
No 1
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=97.60 E-value=0.00031 Score=63.72 Aligned_cols=78 Identities=22% Similarity=0.245 Sum_probs=69.7
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecCcccCC-ChhHHHHHH
Q 027296 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQ-PPESQELLA 218 (225)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~rQ-p~Es~elLe 218 (225)
.+.|||.|||++.---.+..+-+++.|+..|-.|++-+|-|+-+|+-||||.+ . --.||+-.+++- |++.+++.+
T Consensus 127 ~~~vAIVGsR~~s~yG~~~a~~l~~~La~~g~~VVSGlA~GID~~AH~~AL~~-g---TIaVLg~Gld~~YP~~n~~L~~ 202 (382)
T 3maj_A 127 RPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSS-G---TVAVLAGGHDKIYPAEHEDLLL 202 (382)
T ss_dssp SCEEEEECCSSCCHHHHHHHHHHHHHHHHHTCEEEECCCTTHHHHHHHHHTTT-C---EEEECSSCTTSCSSGGGHHHHH
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHHHHCCcEEEeCCccCHHHHHHHHHHhC-C---eEEEECCCcCccCCHhhHHHHH
Confidence 57899999999999999999999999999999888888999999999999997 3 445889999985 889999998
Q ss_pred Hhh
Q 027296 219 KVR 221 (225)
Q Consensus 219 ~V~ 221 (225)
++.
T Consensus 203 ~I~ 205 (382)
T 3maj_A 203 DII 205 (382)
T ss_dssp HHH
T ss_pred HHH
Confidence 884
No 2
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=97.56 E-value=0.00025 Score=57.48 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=54.9
Q ss_pred CCceEEEecccc--cchhHHHHHHHHHHHHHhhCCeeEecCC-CcchHHHHHhhhhccCCCeeEEEecCc
Q 027296 139 GPRAIGFFGTRN--MGFMHQELIEILSYALVITKNHIYTSGA-SGTNAAVIRGALRAERPDLLTVILPQS 205 (225)
Q Consensus 139 g~rrIa~lGsRh--vp~~hq~LIEllsyAlvl~gn~i~TSGA-~GtNaAvIRGalrae~p~lLTViLPQS 205 (225)
..+.||++|||+ ..=-..+..+-+.+.|+..|..|+|=|+ .|.=.|+-|||+++ .-.- .=|||+.
T Consensus 12 ~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~-gG~t-igVlP~~ 79 (176)
T 2iz6_A 12 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEA-GGTT-IGVLPGP 79 (176)
T ss_dssp CCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHT-TCCE-EEEECC-
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHc-CCEE-EEEeCch
Confidence 457899999999 6667788999999999999999999999 99999999999998 3333 3357876
No 3
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=97.32 E-value=0.0007 Score=54.91 Aligned_cols=65 Identities=14% Similarity=0.143 Sum_probs=54.7
Q ss_pred ceEEEecccccc--hhHHHHHHHHHHHHHhhCCeeEecCCC-cchHHHHHhhhhccCCCeeEEEecCccc
Q 027296 141 RAIGFFGTRNMG--FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (225)
Q Consensus 141 rrIa~lGsRhvp--~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~ 207 (225)
|+||++|+++.+ =-+.+..+-+.+.|+..|..|+|-|+. |.=.|+-|||+.+ .- ...=|+|..|.
T Consensus 2 ~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~-gG-~~iGv~p~~l~ 69 (191)
T 1t35_A 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMEN-GG-TAIGVMPSGLF 69 (191)
T ss_dssp CEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTT-TC-CEEEEEETTCC
T ss_pred CEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHc-CC-eEEEEeCchhc
Confidence 679999999974 457788899999999999999999997 9999999999998 33 34446788765
No 4
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=97.30 E-value=0.00085 Score=55.62 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=56.3
Q ss_pred hCCceEEEe-cccccchhHHHHHHHHHHHHHhhCCeeEecCCC-cchHHHHHhhhhccCCCeeEEEecCccc
Q 027296 138 QGPRAIGFF-GTRNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (225)
Q Consensus 138 ~g~rrIa~l-GsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~ 207 (225)
.+.++||++ |+|...--+.+..+-+.+.|+..|+.|+|-|+. |.=.||-|||+++. -...-|+|+.|.
T Consensus 20 ~~~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~G--G~viGv~p~~l~ 89 (199)
T 3qua_A 20 DRQWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKG--GHTVGVIPKALV 89 (199)
T ss_dssp -CCCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTT--CCEEEEEEGGGT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC--CcEEEEeCchhh
Confidence 667899999 578666777888999999999999999999986 99999999999883 344557888773
No 5
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=97.30 E-value=0.00049 Score=57.21 Aligned_cols=69 Identities=22% Similarity=0.195 Sum_probs=55.4
Q ss_pred hCCceEEEe-cccccch-hHHHHHHHHHHHHHhhCCeeEecCCC-cchHHHHHhhhhccCCCeeEEEecCcccC
Q 027296 138 QGPRAIGFF-GTRNMGF-MHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKK 208 (225)
Q Consensus 138 ~g~rrIa~l-GsRhvp~-~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~r 208 (225)
..-++||++ |||+..= -..+..+-+.+.|+..|..|+|-|+. |.=.|+-|||+.+. -.- .=|||..+..
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~G-G~t-iGVlP~~~~~ 82 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG-RHV-IGIIPKTLMP 82 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTT-CCE-EEEEESSCC-
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcC-CcE-EEEcchHhcc
Confidence 345679999 9999643 35788999999999999999999996 99999999999983 333 3357988754
No 6
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.27 E-value=0.00096 Score=55.52 Aligned_cols=59 Identities=27% Similarity=0.260 Sum_probs=52.6
Q ss_pred HHhhCCceEEEecccccch--hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhcc
Q 027296 135 IQQQGPRAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAE 193 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~--~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae 193 (225)
+..-|.+.||++|+|+.+- -+.+..+-+.+.|+..|..|+|=|+.|.=.||-|||+.+.
T Consensus 32 l~~~~~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~GiM~aa~~gAl~~g 92 (217)
T 1wek_A 32 LSELQVPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGPGVMEAVNRGAYEAG 92 (217)
T ss_dssp HHHCCSCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCSHHHHHHHHHHHHTT
T ss_pred HhhcCCCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHcC
Confidence 4555556899999999986 5678999999999999999999999999999999999983
No 7
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.24 E-value=0.0005 Score=54.79 Aligned_cols=62 Identities=13% Similarity=0.029 Sum_probs=53.0
Q ss_pred ceEEEecccccch--hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecC
Q 027296 141 RAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQ 204 (225)
Q Consensus 141 rrIa~lGsRhvp~--~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQ 204 (225)
++||++|+|+.+- -+.+..+-+.+.|+..|..|+|=|+.|.=.|+-|||+.+. -. ..=|+|.
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~GiM~aa~~gAl~~g-G~-tiGV~~~ 65 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQGGMEALARGVKAKG-GL-VVGVTAP 65 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSSTHHHHHHHHHHHTT-CC-EEECCCG
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHcC-Cc-EEEEecc
Confidence 5799999999987 6788999999999999999999999999999999999983 22 3334455
No 8
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=97.09 E-value=0.0018 Score=56.87 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=63.6
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecC-CCcchHHHHHhhhhccCCCeeEEEecCcccCC-ChhHHHHH
Q 027296 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILPQSLKKQ-PPESQELL 217 (225)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalrae~p~lLTViLPQSL~rQ-p~Es~elL 217 (225)
.+.|||.|||++.---.+..+-++..|+ .| ..+.|| |-|+-+|+-||||.+..+ --.||+..|++- |+|.+++.
T Consensus 106 ~~~vaIVGsR~~s~yg~~~a~~l~~~La-~~-~~VVSGlA~GID~~AH~~aL~~~g~--TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVVGSRACSKQGAKSVEKVIQGLE-NE-LVIVSGLAKGIDTAAHMAALQNGGK--TIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHHTTT-TC-SEEEECCCTTHHHHHHHHHHHHTCC--EEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHHh-hh-heEecCcccCHHHHHHHHHHhcCCC--EEEEecccccccCchhhHHHH
Confidence 3689999999999999999999999885 44 666676 689999999999998332 234799999874 77888887
Q ss_pred HHhhh
Q 027296 218 AKVRV 222 (225)
Q Consensus 218 e~V~n 222 (225)
+++.+
T Consensus 182 ~~i~~ 186 (288)
T 3uqz_A 182 DYIGN 186 (288)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 76643
No 9
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=96.98 E-value=0.0022 Score=52.85 Aligned_cols=63 Identities=17% Similarity=0.199 Sum_probs=52.5
Q ss_pred CceEEEeccccc-ch----hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecC
Q 027296 140 PRAIGFFGTRNM-GF----MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQ 204 (225)
Q Consensus 140 ~rrIa~lGsRhv-p~----~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQ 204 (225)
.++||++|+|+. .= -..+..+-|.+.|+..|..|+|-|+-|.=.|+-|||+.+ .- ...-|||.
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~GiM~aa~~gAl~~-GG-~~iGVlP~ 90 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGGRDGVMELVSQGVREA-GG-TVVGILPD 90 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHT-TC-CEEEEEST
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHc-CC-cEEEEeCC
Confidence 468999999875 22 567889999999999999999999999999999999998 33 34445787
No 10
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=96.97 E-value=0.0028 Score=52.20 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=53.5
Q ss_pred HHhhCCceEEEecc-cccchhHHHHHHHHHHHHHhhCCeeEecCCC-cchHHHHHhhhhccCCCeeEEEecCccc
Q 027296 135 IQQQGPRAIGFFGT-RNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (225)
Q Consensus 135 iQq~g~rrIa~lGs-Rhvp~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~ 207 (225)
+-.+|.++||++|+ |...=-+.+.-+-+.+.|+..|+.|+|-|+. |.=.||-|||+.+ . -...=|+|+.|.
T Consensus 8 ~~~~~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~-G-G~viGv~p~~l~ 80 (189)
T 3sbx_A 8 SDEPGRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAH-G-GWTVGVIPKMLV 80 (189)
T ss_dssp -----CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTT-T-CCEEEEEETTTT
T ss_pred CCCCCCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHc-C-CcEEEEcCchhh
Confidence 33567899999985 6444455678888999999999999999987 9999999999998 3 234456788764
No 11
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=96.70 E-value=0.0049 Score=51.35 Aligned_cols=66 Identities=23% Similarity=0.236 Sum_probs=52.5
Q ss_pred CCceEEEe-cccccc-hhHHHHHHHHHHHHHhhCCeeEecCCC-cchHHHHHhhhhccCCCeeEEEecCcc
Q 027296 139 GPRAIGFF-GTRNMG-FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSL 206 (225)
Q Consensus 139 g~rrIa~l-GsRhvp-~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL 206 (225)
.-++||++ |+|... =-+.+.-+-+.+.|+..|+.|+|-|+. |.=.||-|||+++. - ...=|+|+.+
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~G-G-~~iGv~p~~l 76 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGG-L-HVLGIIPKAL 76 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTT-C-CEEEEEEGGG
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcC-C-cEEEEechhc
Confidence 34689999 678753 456778888999999999999999997 99999999999983 3 3444567654
No 12
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=93.96 E-value=0.4 Score=38.55 Aligned_cols=80 Identities=19% Similarity=0.184 Sum_probs=54.4
Q ss_pred ceEEEecccccch------------hHHHHHHHHHHHHHhhC-CeeEecCCCcchHHHHHhhhhc--cCC-CeeEEEecC
Q 027296 141 RAIGFFGTRNMGF------------MHQELIEILSYALVITK-NHIYTSGASGTNAAVIRGALRA--ERP-DLLTVILPQ 204 (225)
Q Consensus 141 rrIa~lGsRhvp~------------~hq~LIEllsyAlvl~g-n~i~TSGA~GtNaAvIRGalra--e~p-~lLTViLPQ 204 (225)
++|||-|-|..++ +-..|-+.|...+ ..| -+++|+||.|+=..+..-|+.. +-| =.|+|++|=
T Consensus 3 ~~i~vTGhR~~~l~if~~~~~~~~~ik~~L~~~l~~l~-~~G~~~~isgga~G~D~~aae~vl~lk~~y~~i~L~~v~Pf 81 (181)
T 2nx2_A 3 KVLAITGYKPFELGIFKQDDKALYYIKKAIKNRLIAFL-DEGLEWILISGQLGVELWAAEAAYDLQEEYPDLKVAVITPF 81 (181)
T ss_dssp CEEEEEECCHHHHTCCSSCCHHHHHHHHHHHHHHHHHH-TTTCCEEEECCCTTHHHHHHHHHHTTTTTCTTCEEEEEESS
T ss_pred eEEEEEeCCCccccCccccchHHHHHHHHHHHHHHHHH-hCCCcEEEECCCccHHHHHHHHHHHhccccCCceEEEEecc
Confidence 6899999998873 3333333333333 345 6999999999999998888773 346 568999993
Q ss_pred ccc--CCChhHHHHHHHhh
Q 027296 205 SLK--KQPPESQELLAKVR 221 (225)
Q Consensus 205 SL~--rQp~Es~elLe~V~ 221 (225)
.=- +=+++.|+.+..++
T Consensus 82 ~~~~~~w~~~~~~~y~~ll 100 (181)
T 2nx2_A 82 YEQEKNWKEPNKEQYEAVL 100 (181)
T ss_dssp BCTTTTSCHHHHHHHHHHH
T ss_pred cchhhCCCHHHHHHHHHHH
Confidence 222 22667777766554
No 13
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=93.80 E-value=0.23 Score=46.83 Aligned_cols=73 Identities=15% Similarity=0.225 Sum_probs=57.0
Q ss_pred hhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhcc------CCCeeEEEecCcc-cCC
Q 027296 137 QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAE------RPDLLTVILPQSL-KKQ 209 (225)
Q Consensus 137 q~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae------~p~lLTViLPQSL-~rQ 209 (225)
...++.+.++||....=-+-+..+-+.++|+..|+.|+|-|+.|.=-|+.+||..+. .-..+-| +|+.| ++|
T Consensus 144 ~r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~LVtGGG~GLMeAa~aGA~~a~a~qr~aGG~vIGI-iP~~L~~~E 222 (462)
T 3gh1_A 144 GATPNLVVCWGGHSINEVEYQYTREVGHELGLRELNICTGCGPGAMEGPMKGAAVGHAKQRYSEYRYLGL-TEPSIIAAE 222 (462)
T ss_dssp TCCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCTTCCEEEE-ECTTTTTTS
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcHHHHHHHHHHHHHhccccccCCCeEEEE-ccchhhhhh
Confidence 356666679999887778888999999999999999999999999989999998873 3344444 46654 344
Q ss_pred C
Q 027296 210 P 210 (225)
Q Consensus 210 p 210 (225)
.
T Consensus 223 ~ 223 (462)
T 3gh1_A 223 P 223 (462)
T ss_dssp C
T ss_pred c
Confidence 3
No 14
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=93.03 E-value=0.4 Score=44.98 Aligned_cols=68 Identities=15% Similarity=0.249 Sum_probs=51.7
Q ss_pred hCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhc------cCCCeeEEEecCcc
Q 027296 138 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA------ERPDLLTVILPQSL 206 (225)
Q Consensus 138 ~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra------e~p~lLTViLPQSL 206 (225)
..++.++++|+....=-.-+..+-+.+.|+..|..|+|-|+.|.=-|+++||..+ ..-.-+=| +|+.|
T Consensus 143 ~~~~ivVv~GSs~~~~~~Ye~A~eLGr~LA~~G~~LVtGGG~GlMEaa~aGA~~a~s~qr~~GG~vIGI-iP~~L 216 (460)
T 3bq9_A 143 EEPNMVVCWGGHSINEIEYKYTKDVGYHIGLRGLNICTGCGPGAMKGPMKGATIGHAKQRVEGGRYLGL-TEPGI 216 (460)
T ss_dssp CCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCSSCCEEEE-ECTTT
T ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHHHHCCCEEEeCCcHHHhhHHHhhHHhhcccccCCCCEEEEE-eChhh
Confidence 4456788899977654445788889999999999999999999998888888877 23334444 46654
No 15
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=66.33 E-value=20 Score=29.65 Aligned_cols=63 Identities=19% Similarity=0.074 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecCcccCCChhHHHHHH
Q 027296 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLA 218 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~rQp~Es~elLe 218 (225)
--..+..++..|....-.+|+|+|++.-|.+.-=.+.-+..-=..+|++|... +|++-.++++
T Consensus 54 K~R~~~~~i~~a~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~--~~~~k~~~~~ 116 (325)
T 1j0a_A 54 KIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKE--ELKGNYLLDK 116 (325)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCC--CSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCC--CCCchHHHHH
Confidence 33455566777777666789999755555433333332223345789999876 4666666655
No 16
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=65.62 E-value=53 Score=26.65 Aligned_cols=82 Identities=11% Similarity=-0.004 Sum_probs=55.6
Q ss_pred hHHHHHHHHHhhCCceEEEecccccchhH-HHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecCc
Q 027296 127 DYLQELLAIQQQGPRAIGFFGTRNMGFMH-QELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQS 205 (225)
Q Consensus 127 D~lqELaaiQq~g~rrIa~lGsRhvp~~h-q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQS 205 (225)
++++++..+.+.|.+.|.|.|.. -|.++ ..+.|++.+.-.. |-+|-+|++ ..+-..++-..++ ..+.+. + +
T Consensus 88 ei~~~i~~~~~~g~~~i~~~gGe-~p~~~~~~~~~li~~i~~~-~~~i~~s~g-~l~~e~l~~L~~a-g~~~v~--i--~ 159 (348)
T 3iix_A 88 EIVERARLAVQFGAKTIVLQSGE-DPYXMPDVISDIVKEIKKM-GVAVTLSLG-EWPREYYEKWKEA-GADRYL--L--R 159 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESC-CGGGTTHHHHHHHHHHHTT-SCEEEEECC-CCCHHHHHHHHHH-TCCEEE--C--C
T ss_pred HHHHHHHHHHHCCCCEEEEEeCC-CCCccHHHHHHHHHHHHhc-CceEEEecC-CCCHHHHHHHHHh-CCCEEe--e--e
Confidence 38888888999999999998877 46777 8899999887766 777776654 3455666655555 444443 2 4
Q ss_pred ccCCChhHHHH
Q 027296 206 LKKQPPESQEL 216 (225)
Q Consensus 206 L~rQp~Es~el 216 (225)
++--.+|..+.
T Consensus 160 let~~~~~~~~ 170 (348)
T 3iix_A 160 HETANPVLHRK 170 (348)
T ss_dssp CBCSCHHHHHH
T ss_pred eeeCCHHHHHH
Confidence 44433444443
No 17
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=60.92 E-value=5.3 Score=31.93 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHHHHh---h-CCeeEecCCCcchHHHHHhhh
Q 027296 153 FMHQELIEILSYALVI---T-KNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 153 ~~hq~LIEllsyAlvl---~-gn~i~TSGA~GtNaAvIRGal 190 (225)
-+++.|.|.++...-. . .+-++|+|++..+.++++..+
T Consensus 82 ~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~ 123 (407)
T 3nra_A 82 GIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATV 123 (407)
T ss_dssp HHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhC
Confidence 3455555555443332 1 466677777666666666654
No 18
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=58.44 E-value=29 Score=28.36 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g 170 (225)
+.+.+..+.+.|.+.|.|.|. =|++|..++|++.++-...+
T Consensus 55 i~~~i~~~~~~g~~~i~~tGG--EPll~~~l~~li~~~~~~~~ 95 (340)
T 1tv8_A 55 MARIAKVYAELGVKKIRITGG--EPLMRRDLDVLIAKLNQIDG 95 (340)
T ss_dssp HHHHHHHHHHTTCCEEEEESS--CGGGSTTHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHCCCCEEEEeCC--CccchhhHHHHHHHHHhCCC
Confidence 555566666789999999994 59999999999999876654
No 19
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=57.63 E-value=7.9 Score=31.14 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=20.8
Q ss_pred hCCeeEecCCCcchHHHHHhhhhccC-CCeeEEEec
Q 027296 169 TKNHIYTSGASGTNAAVIRGALRAER-PDLLTVILP 203 (225)
Q Consensus 169 ~gn~i~TSGA~GtNaAvIRGalrae~-p~lLTViLP 203 (225)
..+-++|+|++..+.+++++.++..| .+.-.||+|
T Consensus 98 ~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~ 133 (417)
T 3g7q_A 98 PQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFP 133 (417)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSBC----CCBEEEES
T ss_pred cccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEe
Confidence 45677888888777777777765422 222245554
No 20
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=54.99 E-value=6.8 Score=31.43 Aligned_cols=23 Identities=17% Similarity=0.211 Sum_probs=14.4
Q ss_pred hCCeeEecCCCcchHHHHHhhhh
Q 027296 169 TKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 169 ~gn~i~TSGA~GtNaAvIRGalr 191 (225)
..+-++|+|++..+.+++++.++
T Consensus 91 ~~~v~~t~g~~~al~~~~~~l~~ 113 (391)
T 3h14_A 91 PGRVVITPGSSGGFLLAFTALFD 113 (391)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHEEEecChHHHHHHHHHHhcC
Confidence 35566677766666666666543
No 21
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=52.50 E-value=12 Score=29.55 Aligned_cols=19 Identities=11% Similarity=0.181 Sum_probs=9.4
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.+++++.
T Consensus 84 ~v~~~~g~~~a~~~~~~~l 102 (383)
T 3kax_A 84 WIVFSAGIVPALSTSIQAF 102 (383)
T ss_dssp GEEEESCHHHHHHHHHHHH
T ss_pred hEEEcCCHHHHHHHHHHHh
Confidence 4445555555444455544
No 22
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=51.55 E-value=8.9 Score=30.15 Aligned_cols=21 Identities=10% Similarity=0.052 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|..|+++
T Consensus 81 t~a~~~~~~~l~~~gd~vl~~ 101 (386)
T 2dr1_A 81 TGIMEASIRNGVSKGGKVLVT 101 (386)
T ss_dssp HHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHhhcCCCeEEEE
Confidence 456666667766666666654
No 23
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=51.31 E-value=12 Score=29.57 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=9.6
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.++++..
T Consensus 92 ~v~~~~g~~~a~~~~~~~~ 110 (391)
T 4dq6_A 92 WLIYSPGVIPAISLLINEL 110 (391)
T ss_dssp GEEEESCHHHHHHHHHHHH
T ss_pred HeEEcCChHHHHHHHHHHh
Confidence 4455555555555555544
No 24
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=50.42 E-value=27 Score=31.57 Aligned_cols=54 Identities=28% Similarity=0.324 Sum_probs=0.0
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcCCCCCCCccccccCCCCccccccccccccccccccccc
Q 027296 7 MRLLLPLSSVSTTNATTPFFNSIDFPSKFLKSPNPNFNFFASSSHPTQHSWRARRTKKTWLCGNMRK 73 (225)
Q Consensus 7 mrLLLPLtt~~is~~~tP~~~~~~~~~~~~~S~NPNFn~~~Sss~psQsq~~~rRsR~~~~~~~~~r 73 (225)
+-||=||++++.++...|++.+-.|...+| |+ .+ -|.....+++-+|-.|.+..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~-~~~~~~~~~~~~~~~~~~~~ 94 (430)
T 4aec_A 41 ALLLNPLTSSSSSSTLRRFRCSPEISSLSF-----------SS-AS-DFSLAMKRQSRSFADGSERD 94 (430)
T ss_dssp -------------------------------------------------------------------
T ss_pred hhhcCCCCCchhhhhccccccchhhccCcc-----------cc-cc-chhhcccCccceeecCCCCC
Confidence 337888888777766777543333333222 21 12 25555566777888777543
No 25
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=50.08 E-value=13 Score=29.16 Aligned_cols=17 Identities=6% Similarity=0.176 Sum_probs=9.2
Q ss_pred HHHHHHHHHHH---hhCCee
Q 027296 157 ELIEILSYALV---ITKNHI 173 (225)
Q Consensus 157 ~LIEllsyAlv---l~gn~i 173 (225)
+.++++..++. ..|.+|
T Consensus 70 ~al~~~~~~~~~~~~~gd~v 89 (385)
T 2bkw_A 70 LGWDIFASNFILSKAPNKNV 89 (385)
T ss_dssp HHHHHHHHHHSCTTCSCCEE
T ss_pred HHHHHHHHHHhccCCCCCeE
Confidence 44555555555 455554
No 26
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=49.85 E-value=17 Score=28.71 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=12.6
Q ss_pred CCeeEecCCCcchHHHHHhhh
Q 027296 170 KNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 170 gn~i~TSGA~GtNaAvIRGal 190 (225)
.+-++|+|++..+.++++..+
T Consensus 86 ~~i~~~~g~~~a~~~~~~~l~ 106 (391)
T 3dzz_A 86 DWCVFASGVVPAISAMVRQFT 106 (391)
T ss_dssp GGEEEESCHHHHHHHHHHHHS
T ss_pred HHEEECCCHHHHHHHHHHHhC
Confidence 355666666666666666654
No 27
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=49.40 E-value=15 Score=30.95 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHhh---CCeeEecCCCcchHHHHHhhhh
Q 027296 154 MHQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalr 191 (225)
+.+.+.+.++..+-.. .+-++|+|++..|.++++.+.+
T Consensus 108 l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~ 148 (497)
T 3mc6_A 108 MESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKM 148 (497)
T ss_dssp HHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHH
Confidence 3445555555544333 5788999999889888888764
No 28
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=49.09 E-value=17 Score=28.70 Aligned_cols=20 Identities=10% Similarity=0.090 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHhh--CCeeEe
Q 027296 156 QELIEILSYALVIT--KNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~--gn~i~T 175 (225)
++.++++..++... |.+|++
T Consensus 92 ~~al~~~~~~~~~~~~gd~vl~ 113 (376)
T 3ezs_A 92 REVLFNFPSFVLFDYQNPTIAY 113 (376)
T ss_dssp HHHHHHHHHHHTTTCSSCEEEE
T ss_pred HHHHHHHHHHHcCCCCCCEEEE
Confidence 44555555555544 444444
No 29
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=48.02 E-value=13 Score=28.90 Aligned_cols=21 Identities=19% Similarity=0.158 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHH----hhCCeeEec
Q 027296 156 QELIEILSYALV----ITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlv----l~gn~i~TS 176 (225)
++.++++..++. ..|.+|+++
T Consensus 70 ~~a~~~~~~~~~~~~~~~gd~vi~~ 94 (382)
T 4hvk_A 70 TEANNLAIIGYAMRNARKGKHILVS 94 (382)
T ss_dssp HHHHHHHHHHHHHHHGGGCCEEEEE
T ss_pred hHHHHHHHHHhhhhhcCCCCEEEEC
Confidence 345555555555 455555543
No 30
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=47.95 E-value=12 Score=28.97 Aligned_cols=21 Identities=5% Similarity=-0.092 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|.+|+++
T Consensus 76 t~a~~~~~~~~~~~gd~vl~~ 96 (359)
T 1svv_A 76 TQTNLIACSLALRPWEAVIAT 96 (359)
T ss_dssp HHHHHHHHHHHCCTTEEEEEE
T ss_pred hHHHHHHHHHHhCCCCEEEEc
Confidence 344555555554455555443
No 31
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=47.91 E-value=16 Score=28.63 Aligned_cols=17 Identities=41% Similarity=0.620 Sum_probs=6.9
Q ss_pred eEecCCCcchHHHHHhh
Q 027296 173 IYTSGASGTNAAVIRGA 189 (225)
Q Consensus 173 i~TSGA~GtNaAvIRGa 189 (225)
++|+|++..+.+++++.
T Consensus 64 ~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 64 VFTSGATEANNLAIIGY 80 (382)
T ss_dssp EEESSHHHHHHHHHHHH
T ss_pred EEcCchHHHHHHHHHHH
Confidence 34444444444444433
No 32
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=47.72 E-value=25 Score=27.53 Aligned_cols=18 Identities=17% Similarity=0.279 Sum_probs=9.7
Q ss_pred HHHHHHHHHhhCCeeEec
Q 027296 159 IEILSYALVITKNHIYTS 176 (225)
Q Consensus 159 IEllsyAlvl~gn~i~TS 176 (225)
++++..++...|..|++.
T Consensus 87 l~~~~~~~~~~gd~vl~~ 104 (393)
T 3kgw_A 87 METALFNLLEPGDSFLTG 104 (393)
T ss_dssp HHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHhcCCCCCEEEEE
Confidence 345555555556565554
No 33
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=47.37 E-value=12 Score=28.93 Aligned_cols=18 Identities=17% Similarity=0.198 Sum_probs=8.5
Q ss_pred eeEecCCCcchHHHHHhh
Q 027296 172 HIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 172 ~i~TSGA~GtNaAvIRGa 189 (225)
-++|+|++..+.+++++.
T Consensus 54 i~~~~g~t~a~~~~~~~~ 71 (352)
T 1iug_A 54 LILTGSGTLAMEALVKNL 71 (352)
T ss_dssp EEEESCHHHHHHHHHHHH
T ss_pred EEEcCchHHHHHHHHHhc
Confidence 344445444444444444
No 34
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=46.69 E-value=12 Score=29.69 Aligned_cols=20 Identities=35% Similarity=0.527 Sum_probs=9.5
Q ss_pred CeeEecCCCcchHHHHHhhh
Q 027296 171 NHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGal 190 (225)
+-++|+|++..+.+++++.+
T Consensus 82 ~v~~~~g~t~al~~~~~~l~ 101 (400)
T 3vax_A 82 ELIFTSGATESNNIALLGLA 101 (400)
T ss_dssp GEEEESCHHHHHHHHHHTTH
T ss_pred cEEEeCCHHHHHHHHHHHHH
Confidence 34445555444444444443
No 35
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=45.97 E-value=14 Score=29.31 Aligned_cols=21 Identities=10% Similarity=0.055 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|.+|+++
T Consensus 69 t~a~~~~~~~~~~~gd~Vl~~ 89 (392)
T 2z9v_A 69 VLGLEAAAASLISPDDVVLNL 89 (392)
T ss_dssp HHHHHHHHHHHCCTTCCEEEE
T ss_pred hHHHHHHHHHhcCCCCEEEEe
Confidence 456777777776666666654
No 36
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=45.73 E-value=62 Score=27.07 Aligned_cols=63 Identities=10% Similarity=-0.018 Sum_probs=40.8
Q ss_pred hHHHHHHHHHhhCCceEEEeccc--ccchhHHHHHHHHHHHHHhhCCee-EecCCCcchHHHHHhhhhc
Q 027296 127 DYLQELLAIQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHI-YTSGASGTNAAVIRGALRA 192 (225)
Q Consensus 127 D~lqELaaiQq~g~rrIa~lGsR--hvp~~hq~LIEllsyAlvl~gn~i-~TSGA~GtNaAvIRGalra 192 (225)
++++|+..+.+.|.++|.|-|+- +-+.-+..+.|++.+.-.. |=.+ +|.|. .+...++-..++
T Consensus 103 ei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~-g~~i~~t~G~--l~~e~l~~L~~a 168 (369)
T 1r30_A 103 QVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM-GLEACMTLGT--LSESQAQRLANA 168 (369)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT-TSEEEEECSS--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc-CCeEEEecCC--CCHHHHHHHHHC
Confidence 37788888888899999987753 5666778899998876543 3222 35543 344445443333
No 37
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=45.55 E-value=14 Score=29.39 Aligned_cols=21 Identities=10% Similarity=0.004 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|..|++.
T Consensus 95 t~al~~~~~~~~~~gd~Vl~~ 115 (393)
T 1vjo_A 95 TAAMEATIANAVEPGDVVLIG 115 (393)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHhccCCCCEEEEE
Confidence 444555555554455444443
No 38
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=45.45 E-value=14 Score=29.65 Aligned_cols=20 Identities=20% Similarity=0.066 Sum_probs=11.2
Q ss_pred CeeEecCCCcchHHHHHhhh
Q 027296 171 NHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGal 190 (225)
+-++|+|++..+.+++++.+
T Consensus 91 ~v~~t~g~~~a~~~~~~~l~ 110 (399)
T 1c7n_A 91 WIINTAGVVPAVFNAVREFT 110 (399)
T ss_dssp GEEEESSHHHHHHHHHHHHC
T ss_pred hEEEcCCHHHHHHHHHHHhc
Confidence 45556666555555555543
No 39
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=44.85 E-value=21 Score=27.87 Aligned_cols=20 Identities=15% Similarity=0.199 Sum_probs=9.6
Q ss_pred CeeEecCCCcchHHHHHhhh
Q 027296 171 NHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGal 190 (225)
+-++|+|++..+.++++.+.
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVA 82 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHH
T ss_pred eEEEECCHHHHHHHHHHhhh
Confidence 34445555544444454443
No 40
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=44.29 E-value=15 Score=29.12 Aligned_cols=21 Identities=14% Similarity=0.052 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|..|+++
T Consensus 80 t~a~~~~~~~~~~~gd~vl~~ 100 (393)
T 2huf_A 80 HGGMEATLCNLLEDGDVILIG 100 (393)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEE
Confidence 456677777776667666654
No 41
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.45 E-value=29 Score=27.51 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHhhCCceEEEecccccchhHHHHHHHHH------------------HHHHhhCCeeEecCCCcchHH
Q 027296 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS------------------YALVITKNHIYTSGASGTNAA 184 (225)
Q Consensus 126 vD~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIElls------------------yAlvl~gn~i~TSGA~GtNaA 184 (225)
.|+++=|...++.+. +||++|-.|+..--..+-+++. ..+...|-.++--|+..++.|
T Consensus 81 ~Dil~al~~a~~~~~-kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A 156 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGN-ELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVTDEA 156 (196)
T ss_dssp HHHHHHHHHHGGGCS-EEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHHHHH
T ss_pred hHHHHHHHHHHhhCC-cEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHHHHHH
Confidence 589999999999875 8999999999876666555543 234556666666665555554
No 42
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=43.40 E-value=10 Score=30.03 Aligned_cols=17 Identities=29% Similarity=0.184 Sum_probs=9.6
Q ss_pred EecCCCcchHHHHHhhh
Q 027296 174 YTSGASGTNAAVIRGAL 190 (225)
Q Consensus 174 ~TSGA~GtNaAvIRGal 190 (225)
+|+||+..+.+++++.+
T Consensus 73 ~t~g~t~a~~~~~~~l~ 89 (362)
T 2c0r_A 73 IQGGASTQFAMIPMNFL 89 (362)
T ss_dssp ESSHHHHHHHHHHHHHC
T ss_pred ECCCchHHHHHHHHhcC
Confidence 45555555555555554
No 43
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=42.68 E-value=25 Score=27.38 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=12.3
Q ss_pred eEecCCCcchHHHHHhhhh
Q 027296 173 IYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 173 i~TSGA~GtNaAvIRGalr 191 (225)
++|+|++..+.++++.+..
T Consensus 90 ~~~~ggt~a~~~~~~~~~~ 108 (397)
T 3f9t_A 90 HIVSGGTEANLMALRCIKN 108 (397)
T ss_dssp EEESCHHHHHHHHHHHHHH
T ss_pred EEecCcHHHHHHHHHHHHH
Confidence 6666666666666666554
No 44
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=42.14 E-value=55 Score=24.36 Aligned_cols=47 Identities=11% Similarity=0.139 Sum_probs=30.2
Q ss_pred HHHHHHHHHhh---CCceEEEecccccchhHHH-HHHHHHHHHHhhCC--eeEecC
Q 027296 128 YLQELLAIQQQ---GPRAIGFFGTRNMGFMHQE-LIEILSYALVITKN--HIYTSG 177 (225)
Q Consensus 128 ~lqELaaiQq~---g~rrIa~lGsRhvp~~hq~-LIEllsyAlvl~gn--~i~TSG 177 (225)
+++++..+... +.+.|.|.| -=|++|-. |.|++.++-.. |- .|.|.|
T Consensus 55 i~~~i~~~~~~~~~~~~~i~~~G--GEP~l~~~~l~~l~~~~~~~-~~~i~i~Tng 107 (245)
T 3c8f_A 55 LMKEVVTYRHFMNASGGGVTASG--GEAILQAEFVRDWFRACKKE-GIHTCLDTNG 107 (245)
T ss_dssp HHHHHGGGHHHHTSTTCEEEEEE--SCGGGGHHHHHHHHHHHHTT-TCCEEEEECC
T ss_pred HHHHHHHhhhhhcCCCCeEEEEC--CCcCCCHHHHHHHHHHHHHc-CCcEEEEeCC
Confidence 55555554443 457888888 45888887 57888887554 32 355665
No 45
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=41.25 E-value=22 Score=28.26 Aligned_cols=43 Identities=16% Similarity=0.143 Sum_probs=24.4
Q ss_pred HHHHHHHHHhhCCc-eEEEecccccchhHHHHHHHHHHHHHhhCCeeEec
Q 027296 128 YLQELLAIQQQGPR-AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 128 ~lqELaaiQq~g~r-rIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TS 176 (225)
+.++|+..-...+. .|.+.++ -.+.++++..++...|..|++.
T Consensus 56 l~~~la~~~~~~~~~~v~~~~g------~t~al~~~~~~~~~~gd~vl~~ 99 (396)
T 2ch1_A 56 VKDGLRYIFQTENRATMCVSGS------AHAGMEAMLSNLLEEGDRVLIA 99 (396)
T ss_dssp HHHHHHHHHTCCCSCEEEESSC------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEECCc------HHHHHHHHHHHhcCCCCeEEEE
Confidence 44555555443333 4544332 3567788888877777766554
No 46
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=41.10 E-value=17 Score=28.61 Aligned_cols=20 Identities=10% Similarity=0.175 Sum_probs=12.3
Q ss_pred CCeeEecCCCcchHHHHHhh
Q 027296 170 KNHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 170 gn~i~TSGA~GtNaAvIRGa 189 (225)
.+-++|+|++..+.++++++
T Consensus 86 ~~v~~~~g~t~a~~~~~~~~ 105 (406)
T 1kmj_A 86 EELVFVRGTTEGINLVANSW 105 (406)
T ss_dssp GGEEEESSHHHHHHHHHHHT
T ss_pred CeEEEeCChhHHHHHHHHHh
Confidence 34566666666666666665
No 47
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=40.62 E-value=17 Score=29.12 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=9.1
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.++++..
T Consensus 101 ~i~~~~g~~~al~~~~~~l 119 (398)
T 3ele_A 101 NLYMTMGAAASLSICFRAL 119 (398)
T ss_dssp GEEEESSHHHHHHHHHHHH
T ss_pred HEEEccCHHHHHHHHHHHH
Confidence 3444555544444444444
No 48
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=40.51 E-value=22 Score=27.93 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhh
Q 027296 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 189 (225)
...+-|.++.-+-.. +-++|+|++..+.++++++
T Consensus 34 ~~~l~~~la~~~~~~-~v~~~~ggt~al~~~~~~~ 67 (375)
T 2fnu_A 34 SLLFEEALCEFLGVK-HALVFNSATSALLTLYRNF 67 (375)
T ss_dssp HHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCC-eEEEeCCHHHHHHHHHHHh
Confidence 344444444433222 5566666666666666655
No 49
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=40.45 E-value=12 Score=29.98 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHhhCCeeEe
Q 027296 156 QELIEILSYALVITKNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~T 175 (225)
.+.++++..++...|.+|++
T Consensus 108 t~a~~~~~~~~~~~gd~vl~ 127 (407)
T 2zc0_A 108 TGALDLLGRVLIDPGDVVIT 127 (407)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 34455555555444544444
No 50
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=40.37 E-value=31 Score=29.72 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhhC--CeeE-ecCCCcchHHHHHhhhhc
Q 027296 157 ELIEILSYALVITK--NHIY-TSGASGTNAAVIRGALRA 192 (225)
Q Consensus 157 ~LIEllsyAlvl~g--n~i~-TSGA~GtNaAvIRGalra 192 (225)
+.-|.++..+-... .-++ |||||..+.++|+|.++.
T Consensus 76 ~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~ 114 (386)
T 3qm2_A 76 EAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD 114 (386)
T ss_dssp HHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC
Confidence 33444444443322 2355 466666666667766654
No 51
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=40.25 E-value=27 Score=29.26 Aligned_cols=38 Identities=8% Similarity=-0.063 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHhhC-C-----eeEecCCCcchHHHHHhhhh
Q 027296 154 MHQELIEILSYALVITK-N-----HIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~g-n-----~i~TSGA~GtNaAvIRGalr 191 (225)
+..++.+.++.-+-... + -++|+||+..|..+++++..
T Consensus 82 l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~ 125 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKW 125 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHH
Confidence 34555555555443332 2 47888888888888777653
No 52
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=40.10 E-value=13 Score=29.57 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++.+++...|.+|+++
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~ 120 (388)
T 1j32_A 100 KQSIFNLMLAMIEPGDEVIIP 120 (388)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 456666666666566655554
No 53
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=39.50 E-value=14 Score=28.88 Aligned_cols=21 Identities=10% Similarity=-0.001 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|.+|+++
T Consensus 79 t~a~~~~~~~~~~~gd~vl~~ 99 (371)
T 2e7j_A 79 REAKFAVMHSLAKKDAWVVMD 99 (371)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEc
Confidence 456777777776666666655
No 54
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=39.22 E-value=29 Score=27.47 Aligned_cols=36 Identities=19% Similarity=0.102 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHH-hhCCeeEecCCCcchHHHHHhhhh
Q 027296 156 QELIEILSYALV-ITKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 156 q~LIEllsyAlv-l~gn~i~TSGA~GtNaAvIRGalr 191 (225)
..|-|.++.-+- -..+-++|+|++..+.+++++.++
T Consensus 68 ~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~ 104 (360)
T 3hdo_A 68 QKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAA 104 (360)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhC
Confidence 344444443332 123555666666666666665543
No 55
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=38.65 E-value=15 Score=29.67 Aligned_cols=9 Identities=0% Similarity=-0.238 Sum_probs=4.5
Q ss_pred HHHHHHHHH
Q 027296 128 YLQELLAIQ 136 (225)
Q Consensus 128 ~lqELaaiQ 136 (225)
+.++|+..-
T Consensus 89 l~~~la~~~ 97 (426)
T 1sff_A 89 LCEIMNQKV 97 (426)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhC
Confidence 445555543
No 56
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=38.08 E-value=22 Score=28.35 Aligned_cols=34 Identities=6% Similarity=0.046 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhh
Q 027296 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 189 (225)
+.++-|.++.-+-. .+-++|+|++..|.++++++
T Consensus 38 ~~~l~~~la~~~~~-~~~i~~~sgt~al~~~l~~l 71 (373)
T 3frk_A 38 DKKFEQEFADYCNV-NYCIGCGNGLDALHLILKGY 71 (373)
T ss_dssp HHHHHHHHHHHHTS-SEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC-CeEEEeCCHHHHHHHHHHHc
Confidence 44444444443322 25556666555555555554
No 57
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=37.96 E-value=26 Score=26.84 Aligned_cols=33 Identities=15% Similarity=0.043 Sum_probs=24.2
Q ss_pred ccchhHHHHHHHHHHHHHh-hCCeeEecCCCcch
Q 027296 150 NMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (225)
Q Consensus 150 hvp~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (225)
.+|=-...|.|.+..|+.. .-.-|+|||++|..
T Consensus 42 iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 42 LVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp EECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3444456778888887764 56789999999975
No 58
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=37.69 E-value=17 Score=28.76 Aligned_cols=19 Identities=11% Similarity=0.135 Sum_probs=8.8
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.+++++.
T Consensus 87 ~i~~~~g~t~a~~~~~~~~ 105 (367)
T 3euc_A 87 EVLLGNGSDEIISMLALAA 105 (367)
T ss_dssp EEEEEEHHHHHHHHHHHHT
T ss_pred eEEEcCCHHHHHHHHHHHH
Confidence 3344444444444444444
No 59
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=37.48 E-value=21 Score=28.17 Aligned_cols=43 Identities=23% Similarity=0.242 Sum_probs=22.7
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEec
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TS 176 (225)
+-++++.+-...+..|.+..+ -.+.++++..++...|.+|+++
T Consensus 72 lr~~la~~~~~~~~~v~~~~g------~t~a~~~~~~~~~~~gd~vl~~ 114 (363)
T 3ffh_A 72 LRKEVADFYQLEEEELIFTAG------VDELIELLTRVLLDTTTNTVMA 114 (363)
T ss_dssp HHHHHHHHHTCCGGGEEEESS------HHHHHHHHHHHHCSTTCEEEEE
T ss_pred HHHHHHHHhCCChhhEEEeCC------HHHHHHHHHHHHccCCCEEEEc
Confidence 555555554433444444332 2455666666665566666654
No 60
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=37.37 E-value=22 Score=28.83 Aligned_cols=53 Identities=9% Similarity=0.137 Sum_probs=28.9
Q ss_pred ccccCCCh-hHHHHHHH-HHh-hCCc---eEEEecccccchhHHHHHHHHHHHHHhhCCeeEecC
Q 027296 119 EFKPVPDV-DYLQELLA-IQQ-QGPR---AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 119 ~~~~~p~v-D~lqELaa-iQq-~g~r---rIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSG 177 (225)
.|.+.+.. ++.++++. +.. .|+. .|.+..+ -++.++++..++...|.+|++.-
T Consensus 74 ~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g------~~~al~~~~~~~~~~gd~Vl~~~ 132 (413)
T 3t18_A 74 SYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPG------GTGAIRSAIFSYLDEGDPLICHD 132 (413)
T ss_dssp SCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESH------HHHHHHHHHHHHCCSSCEEEEES
T ss_pred CcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCc------cHHHHHHHHHHhcCCCCEEEECC
Confidence 45443333 36666666 323 2344 5544432 35666777777766677666653
No 61
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=37.19 E-value=28 Score=26.72 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=23.2
Q ss_pred cchhHHHHHHHHHHHHHhhCCeeEecCCCcch
Q 027296 151 MGFMHQELIEILSYALVITKNHIYTSGASGTN 182 (225)
Q Consensus 151 vp~~hq~LIEllsyAlvl~gn~i~TSGA~GtN 182 (225)
+|==...|.|.+..|+...-.-|+|||++|..
T Consensus 51 v~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~ 82 (167)
T 2g2c_A 51 VPEGYDTVVEAIATALKQGARFIITAGGTGIR 82 (167)
T ss_dssp ECSSHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred eCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 33334677777777766446899999999964
No 62
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=37.06 E-value=27 Score=27.17 Aligned_cols=50 Identities=14% Similarity=0.201 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHh-hCCeeEecCCCcch
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (225)
++.++ +++.|-..+. ...+|=-...|.|.+..|+.. .-.-|+|||++|..
T Consensus 32 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 32 YLRDS--AQEAGHHVVD---KAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 44443 3455654322 123343456778888887765 46899999999875
No 63
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=36.89 E-value=19 Score=29.83 Aligned_cols=21 Identities=29% Similarity=0.211 Sum_probs=10.6
Q ss_pred CCeeEecCCCcchHHHHHhhh
Q 027296 170 KNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 170 gn~i~TSGA~GtNaAvIRGal 190 (225)
.+-++|+|+++.+.++++..+
T Consensus 119 ~~v~~t~g~t~al~~~~~~l~ 139 (427)
T 3dyd_A 119 KDVILTSGCSQAIDLCLAVLA 139 (427)
T ss_dssp GGEEEESSHHHHHHHHHHHHC
T ss_pred HHEEEecCcHHHHHHHHHHhc
Confidence 344555555555555555443
No 64
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=36.72 E-value=34 Score=27.90 Aligned_cols=20 Identities=20% Similarity=0.238 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhhCCeeEec
Q 027296 157 ELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 157 ~LIEllsyAlvl~gn~i~TS 176 (225)
+-++++-.++...|.+|+++
T Consensus 90 ~a~~~~l~~~~~~gd~vi~~ 109 (398)
T 2rfv_A 90 SAITTTLLTLCQQGDHIVSA 109 (398)
T ss_dssp HHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEc
Confidence 44555555555566665554
No 65
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=36.61 E-value=29 Score=27.91 Aligned_cols=43 Identities=21% Similarity=0.176 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHh----hCCeeEec
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI----TKNHIYTS 176 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl----~gn~i~TS 176 (225)
+.+.|+.+-...+..|.|..+ -.+.++++-.++.. .|..|+++
T Consensus 73 l~~~la~~~~~~~~~v~~~~g------gt~a~~~a~~~l~~~~~~~gd~Vl~~ 119 (423)
T 3lvm_A 73 ARNQIADLVGADPREIVFTSG------ATESDNLAIKGAANFYQKKGKHIITS 119 (423)
T ss_dssp HHHHHHHHHTCCGGGEEEESS------HHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred HHHHHHHHcCCCCCeEEEeCC------hHHHHHHHHHHHHHhhccCCCEEEEC
Confidence 334444443333335544433 25566666666664 46666654
No 66
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=36.45 E-value=26 Score=28.04 Aligned_cols=19 Identities=26% Similarity=0.344 Sum_probs=9.9
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.++++..
T Consensus 87 ~i~~~~g~~~a~~~~~~~~ 105 (410)
T 3e2y_A 87 EILVAVGAYGSLFNSIQGL 105 (410)
T ss_dssp SEEEESHHHHHHHHHHHHH
T ss_pred CEEEeCCcHHHHHHHHHHh
Confidence 4455555555555555544
No 67
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=36.45 E-value=13 Score=30.46 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHH-------HhhCCeeEecCCCcchHHHHHhhhhc
Q 027296 155 HQELIEILSYAL-------VITKNHIYTSGASGTNAAVIRGALRA 192 (225)
Q Consensus 155 hq~LIEllsyAl-------vl~gn~i~TSGA~GtNaAvIRGalra 192 (225)
+..|-|-++.-+ +-..+-++|+|++..+.+++++.++.
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~ 129 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGA 129 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEE
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCC
Confidence 445666555554 24468899999999999999988665
No 68
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=35.84 E-value=25 Score=28.23 Aligned_cols=36 Identities=25% Similarity=0.153 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhh
Q 027296 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGal 190 (225)
.+++|.|.++.-+-. .+-++|+|++..+.++++.++
T Consensus 89 ~~~~l~~~la~~~g~-~~v~~~~ggt~a~~~~~~~~~ 124 (398)
T 3a2b_A 89 IHVELEEKLSAYVGK-EAAILFSTGFQSNLGPLSCLM 124 (398)
T ss_dssp HHHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHHh
Confidence 344455544443322 355566666655555555553
No 69
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=35.69 E-value=22 Score=28.21 Aligned_cols=20 Identities=0% Similarity=-0.082 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHhhCCeeEe
Q 027296 156 QELIEILSYALVITKNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~T 175 (225)
.+.++++..++...|.+|++
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~ 118 (370)
T 2z61_A 99 SLGLFFALSSIIDDGDEVLI 118 (370)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 34444444444444444433
No 70
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=35.66 E-value=23 Score=30.26 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHHhh---CCe--eEecCCCcchHHHHHhhhhc
Q 027296 154 MHQELIEILSYALVIT---KNH--IYTSGASGTNAAVIRGALRA 192 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~---gn~--i~TSGA~GtNaAvIRGalra 192 (225)
+.+.+.|.++.-+-.. .+- ++|+|++..|.++++.+.+.
T Consensus 140 le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~ 183 (514)
T 3mad_A 140 FEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDW 183 (514)
T ss_dssp HHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHH
Confidence 4455666666655444 466 99999999999999988654
No 71
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=35.57 E-value=9.5 Score=32.99 Aligned_cols=20 Identities=25% Similarity=0.139 Sum_probs=15.7
Q ss_pred eeEecCCCcchHHHHHhhhhc
Q 027296 172 HIYTSGASGTNAAVIRGALRA 192 (225)
Q Consensus 172 ~i~TSGA~GtNaAvIRGalra 192 (225)
-++|||+ +.|.+++++.++.
T Consensus 114 V~~~sGs-~an~~~~~all~p 133 (483)
T 1rv3_A 114 VQPYSGS-PANFAVYTALVEP 133 (483)
T ss_dssp CCCSSHH-HHHHHHHHHHTCT
T ss_pred EEECCcH-HHHHHHHHHhcCC
Confidence 5788888 8888888887654
No 72
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=35.29 E-value=21 Score=27.88 Aligned_cols=11 Identities=18% Similarity=0.380 Sum_probs=4.7
Q ss_pred HHHhhCCeeEe
Q 027296 165 ALVITKNHIYT 175 (225)
Q Consensus 165 Alvl~gn~i~T 175 (225)
++...|.+|++
T Consensus 72 ~~~~~gd~vi~ 82 (384)
T 3zrp_A 72 SLLKPNDKILV 82 (384)
T ss_dssp GGCCTTCEEEE
T ss_pred hhcCCCCEEEE
Confidence 33344444444
No 73
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=35.05 E-value=17 Score=29.36 Aligned_cols=21 Identities=10% Similarity=0.025 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 101 ~~al~~~~~~l~~~gd~Vlv~ 121 (385)
T 1b5p_A 101 SQALFNLFQAILDPGDEVIVL 121 (385)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 444555555554444444433
No 74
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=35.03 E-value=17 Score=33.04 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=13.0
Q ss_pred eEecCC--CcchHHHHHhhhh
Q 027296 173 IYTSGA--SGTNAAVIRGALR 191 (225)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (225)
|+|||+ .|.||| |||+.|
T Consensus 8 VltsGGdapGmNa~-Ir~vv~ 27 (419)
T 3hno_A 8 YAQSGGVTAVINAS-AAGVIE 27 (419)
T ss_dssp EEECSSCCSSHHHH-HHHHHH
T ss_pred EEccCCChHHHHHH-HHHHHH
Confidence 789996 899974 455543
No 75
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=34.65 E-value=33 Score=26.68 Aligned_cols=28 Identities=29% Similarity=0.261 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhhCCeeEecCCCcchH
Q 027296 156 QELIEILSYALVITKNHIYTSGASGTNA 183 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSGA~GtNa 183 (225)
..|.|.+..|+...-+-|+|||++|...
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 5677777777654567899999999754
No 76
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=34.63 E-value=20 Score=28.13 Aligned_cols=21 Identities=14% Similarity=0.007 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|.+|++.
T Consensus 78 ~~a~~~~~~~l~~~gd~vl~~ 98 (354)
T 3ly1_A 78 SEGIRAAIEAYASLEAQLVIP 98 (354)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEC
Confidence 345555555555555555443
No 77
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=34.51 E-value=30 Score=26.48 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=23.3
Q ss_pred cchhHHHHHHHHHHHHHh-hCCeeEecCCCcch
Q 027296 151 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (225)
Q Consensus 151 vp~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (225)
+|=-...|.|.+..|+.. .-.-|+|||++|..
T Consensus 52 v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 84 (167)
T 1uuy_A 52 VPDEVERIKDILQKWSDVDEMDLILTLGGTGFT 84 (167)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 343446777888887763 56789999999864
No 78
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=34.28 E-value=25 Score=28.26 Aligned_cols=45 Identities=29% Similarity=0.332 Sum_probs=20.7
Q ss_pred hhHHHHHHHHHhhCC-----ceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecC
Q 027296 126 VDYLQELLAIQQQGP-----RAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 126 vD~lqELaaiQq~g~-----rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSG 177 (225)
||+..+....|..++ ++|+|+|.-+|+-. ++..|+..|+.++-..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~-------~a~~l~~~g~~V~~~~ 60 (316)
T 2uyy_A 11 VDLGTENLYFQSMGSITPTDKKIGFLGLGLMGSG-------IVSNLLKMGHTVTVWN 60 (316)
T ss_dssp --------------CCCCCSSCEEEECCSHHHHH-------HHHHHHHTTCCEEEEC
T ss_pred cCccccceeecCCCCCCCCCCeEEEEcccHHHHH-------HHHHHHhCCCEEEEEe
Confidence 677777777776555 68999998777753 3445556677765433
No 79
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=34.27 E-value=31 Score=27.49 Aligned_cols=19 Identities=16% Similarity=0.034 Sum_probs=13.0
Q ss_pred eeEecCCCcchHHHHHhhh
Q 027296 172 HIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 172 ~i~TSGA~GtNaAvIRGal 190 (225)
-++|+|++..+.++++..+
T Consensus 90 v~~~~g~~~a~~~~~~~~~ 108 (389)
T 1gd9_A 90 IMVLLGANQAFLMGLSAFL 108 (389)
T ss_dssp EEEESSTTHHHHHHHTTTC
T ss_pred EEEcCChHHHHHHHHHHhC
Confidence 6677777777777776654
No 80
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=34.13 E-value=22 Score=29.05 Aligned_cols=45 Identities=9% Similarity=0.177 Sum_probs=28.1
Q ss_pred hHHHHHHHHHh--------hCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecC
Q 027296 127 DYLQELLAIQQ--------QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 127 D~lqELaaiQq--------~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSG 177 (225)
++.++++..-. -.+..|.+.. --++.|+++.+++...|..|++.-
T Consensus 87 ~lr~~la~~~~~~~g~~~~~~~~~i~~~~------G~~~ai~~~~~~~~~~gd~Vl~~~ 139 (428)
T 1iay_A 87 EFRKAIAKFMEKTRGGRVRFDPERVVMAG------GATGANETIIFCLADPGDAFLVPS 139 (428)
T ss_dssp HHHHHHHHHHHHHTTTCSCCCTTSCEEEE------HHHHHHHHHHHHHCCTTCEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCCCChhhEEEcc------ChHHHHHHHHHHhCCCCCeEEEcc
Confidence 36677776654 2244554332 246788888888887777776653
No 81
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=33.89 E-value=33 Score=26.54 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=7.2
Q ss_pred eEecCCCcchHHHHHh
Q 027296 173 IYTSGASGTNAAVIRG 188 (225)
Q Consensus 173 i~TSGA~GtNaAvIRG 188 (225)
++|+|++..|.++++.
T Consensus 63 ~~~~~gt~a~~~al~~ 78 (356)
T 1v72_A 63 FLVPTGTAANALCLSA 78 (356)
T ss_dssp EEESCHHHHHHHHHHT
T ss_pred EEeCCccHHHHHHHHH
Confidence 4444444444444444
No 82
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=33.78 E-value=33 Score=26.78 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=33.3
Q ss_pred HHHHHH-HHHhhCCceEEEecccccchhHHHHHHHHHHHHHh-hCCeeEecCCCcch
Q 027296 128 YLQELL-AIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (225)
Q Consensus 128 ~lqELa-aiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (225)
++.++. .+.+.|-.. .. ..+|=-...|.|.+..++.. .-.-|+|||++|..
T Consensus 29 ~l~~~l~~l~~~G~~v--~~--~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 29 AIIDYLKDVIITPFEV--EY--RVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHBCSCCEE--EE--EEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred HHHHHHHHHHhCCCEE--EE--EEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 454443 233567543 22 25565567888888888763 56899999999976
No 83
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=33.58 E-value=26 Score=27.60 Aligned_cols=21 Identities=5% Similarity=-0.266 Sum_probs=10.8
Q ss_pred CCeeEecCCCcchHHHHHhhh
Q 027296 170 KNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 170 gn~i~TSGA~GtNaAvIRGal 190 (225)
.+-++|+|++..+.+++++.+
T Consensus 82 ~~i~~t~g~~~a~~~~~~~~~ 102 (377)
T 3fdb_A 82 EWIFPIPDVVRGLYIAIDHFT 102 (377)
T ss_dssp GGEEEESCHHHHHHHHHHHHS
T ss_pred HHEEEeCChHHHHHHHHHHhc
Confidence 344555555555555555443
No 84
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=33.51 E-value=24 Score=28.27 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=9.5
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.++++..
T Consensus 89 ~v~~t~g~~~al~~~~~~l 107 (390)
T 1d2f_A 89 TVVYGPSVIYMVSELIRQW 107 (390)
T ss_dssp GEEEESCHHHHHHHHHHHS
T ss_pred HEEEcCCHHHHHHHHHHHh
Confidence 4455555555444555544
No 85
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=33.41 E-value=26 Score=28.43 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=31.8
Q ss_pred ccccCCCh-hHHHHHHH-HHh-hCCc---eEEEecccccchhHHHHHHHHHHHHHhhCCeeEecC
Q 027296 119 EFKPVPDV-DYLQELLA-IQQ-QGPR---AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 119 ~~~~~p~v-D~lqELaa-iQq-~g~r---rIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSG 177 (225)
.|.+.... ++.++++. +.. .|+. .|.+..+ -++.++++..++...|.+|++.-
T Consensus 75 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g------~~~al~~~~~~l~~~gd~Vl~~~ 133 (418)
T 3rq1_A 75 GYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAG------GTGGIHHLIHNYTEPGDEVLTAD 133 (418)
T ss_dssp SCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESH------HHHHHHHHHHHHSCTTCEEEEES
T ss_pred CCCCCCChHHHHHHHHHHHhcccCccccccEEECCc------hHHHHHHHHHHhcCCCCEEEECC
Confidence 45554433 36777776 323 3455 5554432 35677788888877787777654
No 86
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=33.36 E-value=16 Score=28.10 Aligned_cols=12 Identities=17% Similarity=-0.263 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHH
Q 027296 156 QELIEILSYALV 167 (225)
Q Consensus 156 q~LIEllsyAlv 167 (225)
.+.++++..++.
T Consensus 62 t~a~~~~~~~~~ 73 (353)
T 2yrr_A 62 SLGMEAGLANLD 73 (353)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHHHhc
Confidence 334444444443
No 87
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=33.11 E-value=65 Score=30.63 Aligned_cols=58 Identities=24% Similarity=0.368 Sum_probs=34.6
Q ss_pred ccccCCC---hh-HHHHHHHHHh-hCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecC
Q 027296 119 EFKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 119 ~~~~~p~---vD-~lqELaaiQq-~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSG 177 (225)
+++++.- +| ++++|..|++ .|+..|+++|+-.+......+.--+..+ ++.-|++.+.+
T Consensus 87 ~~~~isWdeAl~~ia~~l~~i~~~~G~~si~~~~sg~~~~e~~~~~~kl~~~-~~gt~n~d~~~ 149 (802)
T 3ml1_A 87 DFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTVWEGYAAAKLYKA-GFRSNNIDPNA 149 (802)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHTCGGGEEEEECTTSCHHHHHHHHHHHHT-TTCCCCEEEGG
T ss_pred CeEEeCHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCCchHHHHHHHHHHHh-hcCCccccCCc
Confidence 4555552 67 7788888866 6999999999877654332222222111 23446666544
No 88
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=33.00 E-value=47 Score=26.65 Aligned_cols=40 Identities=10% Similarity=0.045 Sum_probs=28.4
Q ss_pred chhHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhc
Q 027296 152 GFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 192 (225)
Q Consensus 152 p~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 192 (225)
.-.++.|.|.++.-+- ..+-++|+|++..|.++|+.+...
T Consensus 77 ~~~~~~l~~~la~~~~-~~~v~~~~gg~ea~~~al~~~~~~ 116 (395)
T 3nx3_A 77 NENIAAAAKNLAKASA-LERVFFTNSGTESIEGAMKTARKY 116 (395)
T ss_dssp CHHHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC-CCeEEEeCCHHHHHHHHHHHHHHH
Confidence 3456667676665442 457789999999999999877654
No 89
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=32.88 E-value=33 Score=28.38 Aligned_cols=35 Identities=14% Similarity=0.037 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhh
Q 027296 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGal 190 (225)
+.++-|.++.-+-. .+-++|+|++..|.+++++++
T Consensus 58 ~~~l~~~la~~~g~-~~~~~~~~gt~a~~~al~~l~ 92 (412)
T 2cb1_A 58 AKALEERLKALEGA-LEAVVLASGQAATFAALLALL 92 (412)
T ss_dssp HHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHHh
Confidence 44444444443321 245566666666666666554
No 90
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=32.80 E-value=33 Score=27.02 Aligned_cols=21 Identities=19% Similarity=0.249 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|.+|++.
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~ 112 (365)
T 3get_A 92 DQVIEFAIHSKLNSKNAFLQA 112 (365)
T ss_dssp HHHHHHHHHHHCCTTCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEEe
Confidence 344444444444444444443
No 91
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=32.58 E-value=12 Score=29.73 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=31.2
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEec
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TS 176 (225)
|....+....=++.--..|+|-|+||+-.-.|-.+..-+|||
T Consensus 22 i~~~~~~~~~~laDgvl~FiHHQiiElARDCL~KSr~~LITs 63 (114)
T 1v9v_A 22 LTAYAPGARLALADGVLGFIHHQIVELARDCLAKSGENLVTS 63 (114)
T ss_dssp HHHSCBTTTBCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCCH
T ss_pred HHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 444555555555666678999999999988888877778876
No 92
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=32.56 E-value=26 Score=27.05 Aligned_cols=21 Identities=10% Similarity=0.067 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHhhCCee-Eec
Q 027296 156 QELIEILSYALVITKNHI-YTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i-~TS 176 (225)
.+.++++..++...|..+ +++
T Consensus 66 t~a~~~~~~~~~~~gd~vi~~~ 87 (366)
T 1m32_A 66 SYAVEAVLGSALGPQDKVLIVS 87 (366)
T ss_dssp HHHHHHHHHHSCCTTCCEEEEE
T ss_pred HHHHHHHHHHhcCCCCeEEEEe
Confidence 556677777766566553 444
No 93
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=32.30 E-value=19 Score=33.62 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=13.5
Q ss_pred eEecCC--CcchHHHHHhhhhc
Q 027296 173 IYTSGA--SGTNAAVIRGALRA 192 (225)
Q Consensus 173 i~TSGA--~GtNaAvIRGalra 192 (225)
|+|||+ .|.||| |||+.|.
T Consensus 102 IltsGGdaPGmNaa-Iravv~~ 122 (487)
T 2hig_A 102 IVTCGGICPGLNDV-IRSITLT 122 (487)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEecCCCcchhhHH-HHHHHHH
Confidence 579998 699974 5665554
No 94
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=32.12 E-value=24 Score=27.25 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHh--hCCeeEecCCCcchHHHHHhhh
Q 027296 155 HQELIEILSYALVI--TKNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 155 hq~LIEllsyAlvl--~gn~i~TSGA~GtNaAvIRGal 190 (225)
...+.|.++.-+-. ..+-++|+|++..+.+++++.+
T Consensus 45 ~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~ 82 (362)
T 3ffr_A 45 YKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV 82 (362)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence 34455555554422 2346788888888888888776
No 95
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=32.03 E-value=26 Score=28.82 Aligned_cols=22 Identities=9% Similarity=0.101 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHhhCCeeEec
Q 027296 155 HQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TS 176 (225)
-.+.++++..++...|..|++.
T Consensus 120 g~~a~~~~~~~l~~~gd~vl~~ 141 (435)
T 3piu_A 120 ATSANETFIFCLADPGEAVLIP 141 (435)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEE
T ss_pred hHHHHHHHHHHhcCCCCeEEEC
Confidence 3456666666666666665543
No 96
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=31.64 E-value=14 Score=30.58 Aligned_cols=10 Identities=40% Similarity=0.617 Sum_probs=8.6
Q ss_pred eeEecCCCcc
Q 027296 172 HIYTSGASGT 181 (225)
Q Consensus 172 ~i~TSGA~Gt 181 (225)
-|||||.||.
T Consensus 42 Il~TSGTTG~ 51 (358)
T 4gs5_A 42 VLHTSGSTGM 51 (358)
T ss_dssp EEEEECTTSS
T ss_pred EEECCccccc
Confidence 4799999995
No 97
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=31.58 E-value=35 Score=27.38 Aligned_cols=16 Identities=6% Similarity=-0.157 Sum_probs=9.2
Q ss_pred ecCCCcchHHHHHhhh
Q 027296 175 TSGASGTNAAVIRGAL 190 (225)
Q Consensus 175 TSGA~GtNaAvIRGal 190 (225)
|+|+++.+..++++..
T Consensus 102 t~G~~~al~~~~~~l~ 117 (401)
T 7aat_A 102 GISGTGSLRVGANFLQ 117 (401)
T ss_dssp EEHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHH
Confidence 6666666655555543
No 98
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=31.49 E-value=17 Score=34.53 Aligned_cols=31 Identities=13% Similarity=0.135 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhhCCeeEecCCCcchHHHHHh
Q 027296 156 QELIEILSYALVITKNHIYTSGASGTNAAVIRG 188 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRG 188 (225)
-..++++-.|++..|.+|+++-- ...+++.|
T Consensus 199 t~an~~ai~al~~pGD~VLv~~~--~H~S~~~~ 229 (730)
T 1c4k_A 199 SNANNTVTSALVSNGDLVLFDRN--NHKSVYNS 229 (730)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETT--CCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEcCC--chHHHHHH
Confidence 34566666667777777766532 34455555
No 99
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=31.46 E-value=42 Score=26.65 Aligned_cols=22 Identities=9% Similarity=0.095 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhhCCeeEecC
Q 027296 156 QELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSG 177 (225)
.+-++++..++...|.+|+++-
T Consensus 74 t~al~~~~~~~~~~gd~Vl~~~ 95 (411)
T 3nnk_A 74 RAGIEAILVSAIRPGDKVLVPV 95 (411)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEec
Confidence 3456666666666677766653
No 100
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=31.37 E-value=62 Score=25.81 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=11.7
Q ss_pred HHHHHHHHHH-HhhCCeeEec
Q 027296 157 ELIEILSYAL-VITKNHIYTS 176 (225)
Q Consensus 157 ~LIEllsyAl-vl~gn~i~TS 176 (225)
+.++++..++ ...|.+|+++
T Consensus 64 ~al~~~l~~l~~~~gd~Vi~~ 84 (388)
T 1b9h_A 64 HALELALQVMGVGPGTEVIVP 84 (388)
T ss_dssp HHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCcCEEEEC
Confidence 5566666666 4556666554
No 101
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=31.08 E-value=25 Score=28.61 Aligned_cols=21 Identities=10% Similarity=-0.080 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|.+|++.
T Consensus 111 ~~a~~~~~~~~~~~gd~Vl~~ 131 (429)
T 1yiz_A 111 YEALYATIQGHVDEGDEVIII 131 (429)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 556677666666666655544
No 102
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=30.81 E-value=43 Score=26.63 Aligned_cols=21 Identities=24% Similarity=0.186 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 97 ~~a~~~~~~~l~~~gd~vl~~ 117 (376)
T 2dou_A 97 QEGLAHLLLALTEPEDLLLLP 117 (376)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEC
Confidence 455555555555455555543
No 103
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=30.71 E-value=36 Score=28.05 Aligned_cols=21 Identities=5% Similarity=0.020 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 118 ~~al~~~~~~l~~~gd~Vlv~ 138 (425)
T 2r2n_A 118 QQGLCKVFEMIINPGDNVLLD 138 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 566777777776666666554
No 104
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=30.56 E-value=36 Score=28.06 Aligned_cols=16 Identities=19% Similarity=0.071 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHhhCC
Q 027296 156 QELIEILSYALVITKN 171 (225)
Q Consensus 156 q~LIEllsyAlvl~gn 171 (225)
++.+.++..++...|.
T Consensus 101 ~~al~~~~~~l~~~Gd 116 (391)
T 3bwn_A 101 TQLCQAAVHALSSLAR 116 (391)
T ss_dssp HHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhcCCCC
Confidence 4555555555555554
No 105
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=30.53 E-value=33 Score=27.86 Aligned_cols=20 Identities=20% Similarity=0.127 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHhhCCeeEe
Q 027296 156 QELIEILSYALVITKNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~T 175 (225)
.+.++++..++...|.+|++
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~ 128 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILV 128 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE
Confidence 45555555555545554444
No 106
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=30.27 E-value=30 Score=28.04 Aligned_cols=16 Identities=0% Similarity=-0.305 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHH--hhCC
Q 027296 156 QELIEILSYALV--ITKN 171 (225)
Q Consensus 156 q~LIEllsyAlv--l~gn 171 (225)
.+.++++..++. ..|.
T Consensus 115 t~al~~~~~~l~~~~~gd 132 (437)
T 3g0t_A 115 MQGCFVSFLVANRTHKNR 132 (437)
T ss_dssp HHHHHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHHHhcCCCCC
Confidence 344555555554 4444
No 107
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=30.22 E-value=95 Score=28.34 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=34.0
Q ss_pred ccccCCC---hh-HHHHHHHHHh-hCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCC
Q 027296 119 EFKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGA 178 (225)
Q Consensus 119 ~~~~~p~---vD-~lqELaaiQq-~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA 178 (225)
+++++.= +| +++.|..|++ .|+..|+++|+.....--..++.-+..+ ++.-+++.+.+.
T Consensus 75 ~~~~isWdeAl~~ia~~l~~~~~~~G~~~i~~~~~~~~~~e~~~~~~~~~~~-~~gs~n~~~~~~ 138 (723)
T 2nap_A 75 KLEPVSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCLTEESYVANKIFKG-GFGTNNVDGNPR 138 (723)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTSCHHHHHHHHHHHHH-TSCCCCEEEGGG
T ss_pred CEEEecHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcccchhhHHHHHHHHH-hcCCCceeCCCc
Confidence 4556552 56 6778888775 5999999998865542222233222222 234466666543
No 108
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=30.21 E-value=35 Score=27.80 Aligned_cols=19 Identities=21% Similarity=0.183 Sum_probs=8.2
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.+++++.
T Consensus 49 ~v~~~~ggt~al~~~~~~l 67 (394)
T 1o69_A 49 NALALNSATAALHLALRVA 67 (394)
T ss_dssp EEEEESCHHHHHHHHHHHT
T ss_pred cEEEeCCHHHHHHHHHHHc
Confidence 3344444444444444443
No 109
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=30.19 E-value=37 Score=27.23 Aligned_cols=42 Identities=5% Similarity=0.068 Sum_probs=21.5
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHH-HhhCCeeEecC
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAL-VITKNHIYTSG 177 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAl-vl~gn~i~TSG 177 (225)
+-++|+.+- |.+.+.+.++- .+-++++..++ ...|.+|+++.
T Consensus 61 l~~~la~~~--~~~~~i~~~~g------t~al~~~l~~~~~~~gd~vl~~~ 103 (391)
T 3dr4_A 61 FEKAFADYC--GVKHAIACNNG------TTALHLALVAMGIGPGDEVIVPS 103 (391)
T ss_dssp HHHHHHHHH--TCSEEEEESSH------HHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHHHHHHHh--CCCcEEEeCCH------HHHHHHHHHHcCCCCcCEEEECC
Confidence 445555443 33355554432 23455666666 55666666653
No 110
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=30.12 E-value=43 Score=26.78 Aligned_cols=48 Identities=15% Similarity=0.114 Sum_probs=31.0
Q ss_pred HHHHHHHHHhhCCc--eEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCCCcchH
Q 027296 128 YLQELLAIQQQGPR--AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNA 183 (225)
Q Consensus 128 ~lqELaaiQq~g~r--rIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA~GtNa 183 (225)
++.++ +.+.|-. ++.+++ =-...|.|.+..|+.. -.-|+|||++|...
T Consensus 27 ~l~~~--L~~~G~~v~~~~iv~-----Dd~~~I~~~l~~a~~~-~DlVittGG~g~~~ 76 (172)
T 3kbq_A 27 FIGNF--LTYHGYQVRRGFVVM-----DDLDEIGWAFRVALEV-SDLVVSSGGLGPTF 76 (172)
T ss_dssp HHHHH--HHHTTCEEEEEEEEC-----SCHHHHHHHHHHHHHH-CSEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEEEEEeC-----CCHHHHHHHHHHHHhc-CCEEEEcCCCcCCc
Confidence 44443 3455643 334444 3356788888877764 78999999999754
No 111
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=29.82 E-value=41 Score=27.10 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=12.1
Q ss_pred CeeEecCCCcchHHHHHhhh
Q 027296 171 NHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGal 190 (225)
+-++|+|++..+.++++..+
T Consensus 93 ~i~~~~g~~~a~~~~~~~~~ 112 (422)
T 3fvs_A 93 NVLVTVGGYGALFTAFQALV 112 (422)
T ss_dssp HEEEESHHHHHHHHHHHHHC
T ss_pred cEEEECChHHHHHHHHHHHc
Confidence 55666666666666666554
No 112
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=29.77 E-value=51 Score=27.85 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=28.4
Q ss_pred hCCeeEecCCCcchHHHH---HhhhhccCCCeeEEEecCcc
Q 027296 169 TKNHIYTSGASGTNAAVI---RGALRAERPDLLTVILPQSL 206 (225)
Q Consensus 169 ~gn~i~TSGA~GtNaAvI---RGalrae~p~lLTViLPQSL 206 (225)
-||-++-.|+.|..-|++ ++|||+ -..++||..|++.
T Consensus 30 ~G~vlvigGs~~~~GA~~laa~aAlr~-GaGlv~~~~~~~~ 69 (279)
T 3rpz_A 30 YGTALLLAGSDDMPGAALLAGLGAMRS-GLGKLVIGTSENV 69 (279)
T ss_dssp GCEEEEECCBTTBCHHHHHHHHHHHTT-TCSEEEEEECTTT
T ss_pred CCEEEEEeCCCCCCcHHHHHHHHHHHh-CCCeEEEEecHHH
Confidence 467777778766666555 889998 8999999988763
No 113
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=29.72 E-value=34 Score=27.19 Aligned_cols=41 Identities=12% Similarity=0.085 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHH-HhhCCeeEec
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAL-VITKNHIYTS 176 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAl-vl~gn~i~TS 176 (225)
+-++|+..- |.+.|.+.++ -.+.++++..++ ...|..|+++
T Consensus 44 l~~~la~~~--~~~~~~~~~~------gt~al~~~~~~~~~~~gd~Vl~~ 85 (393)
T 1mdo_A 44 LEAAFCRLT--GNQYAVAVSS------ATAGMHIALMALGIGEGDEVITP 85 (393)
T ss_dssp HHHHHHHHH--CCSEEEEESC------HHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHh--CCCcEEEecC------hHHHHHHHHHHcCCCCCCEEEeC
Confidence 444555443 3345544443 256667777776 5566666655
No 114
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=29.65 E-value=34 Score=28.00 Aligned_cols=20 Identities=0% Similarity=0.032 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhCCeeEe
Q 027296 156 QELIEILSYALVITKNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~T 175 (225)
++.++++..++...|.+|++
T Consensus 119 ~~al~~~~~~l~~~gd~Vl~ 138 (404)
T 2o1b_A 119 KNGLVAVPTCVINPGDYVLL 138 (404)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 34455555555444444443
No 115
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=29.58 E-value=36 Score=27.15 Aligned_cols=21 Identities=19% Similarity=0.086 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~~ 121 (386)
T 1u08_A 101 TEALYAAITALVRNGDEVICF 121 (386)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 455666666665555555443
No 116
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=29.55 E-value=24 Score=28.36 Aligned_cols=21 Identities=5% Similarity=0.197 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 101 ~~al~~~~~~~~~~gd~Vl~~ 121 (397)
T 2zyj_A 101 QQALDLVGKVFLDEGSPVLLE 121 (397)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 556666666666566666553
No 117
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=29.46 E-value=31 Score=27.24 Aligned_cols=17 Identities=12% Similarity=0.143 Sum_probs=7.1
Q ss_pred HHHHHHHH-HhhCCeeEe
Q 027296 159 IEILSYAL-VITKNHIYT 175 (225)
Q Consensus 159 IEllsyAl-vl~gn~i~T 175 (225)
++++..++ ...|.+|++
T Consensus 66 ~~~~~~~~~~~~gd~v~~ 83 (374)
T 3uwc_A 66 LAMSFKMLNIGAGDEVIT 83 (374)
T ss_dssp HHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHcCCCCCCEEEE
Confidence 34444444 334444443
No 118
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=29.40 E-value=33 Score=27.23 Aligned_cols=17 Identities=24% Similarity=0.210 Sum_probs=7.3
Q ss_pred eEecCCCcchHHHHHhh
Q 027296 173 IYTSGASGTNAAVIRGA 189 (225)
Q Consensus 173 i~TSGA~GtNaAvIRGa 189 (225)
++|+|++..+.++++.+
T Consensus 94 ~~~~g~t~a~~~~~~~~ 110 (420)
T 1t3i_A 94 VYTRNATEAINLVAYSW 110 (420)
T ss_dssp EEESSHHHHHHHHHHHT
T ss_pred EEcCChHHHHHHHHHHh
Confidence 44444444444444443
No 119
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=29.35 E-value=37 Score=27.15 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhh
Q 027296 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 189 (225)
..++-|.++.-+-. .+-++|+|++..+.++++++
T Consensus 37 ~~~l~~~la~~~~~-~~~~~~~sGt~al~~al~~~ 70 (367)
T 3nyt_A 37 VTELEDRLADFVGA-KYCISCANGTDALQIVQMAL 70 (367)
T ss_dssp HHHHHHHHHHHHTC-SEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHh
Confidence 33444444433322 24555655555555555554
No 120
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=29.29 E-value=30 Score=28.45 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHH--hhCCeeEecCCCcchHHHHHhhhh
Q 027296 154 MHQELIEILSYALV--ITKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 154 ~hq~LIEllsyAlv--l~gn~i~TSGA~GtNaAvIRGalr 191 (225)
.+.+|.|.|+.-+- ...+-++|+|++..|.++|+.+..
T Consensus 87 ~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~ 126 (439)
T 3dxv_A 87 PAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVK 126 (439)
T ss_dssp HHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 45566666655431 114677888888888888877644
No 121
>1sn9_A BBAT, tetrameric beta-BETA-alpha mini-protein; protein design, domain swapping, oligomerization, de novo protein; HET: DBZ; 1.20A {Synthetic} SCOP: k.14.1.1 PDB: 1sna_A* 1sne_A* 1xof_B* 1xof_A*
Probab=29.23 E-value=28 Score=21.45 Aligned_cols=17 Identities=29% Similarity=0.591 Sum_probs=13.5
Q ss_pred cCCChhHHHHHHHHHhh
Q 027296 122 PVPDVDYLQELLAIQQQ 138 (225)
Q Consensus 122 ~~p~vD~lqELaaiQq~ 138 (225)
.+|..|++.||+.+-.+
T Consensus 3 ripsydfadelakllrq 19 (26)
T 1sn9_A 3 RIPSYDFADELAKLLRQ 19 (26)
T ss_dssp CBTTBCHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHH
Confidence 47889999999987443
No 122
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=29.02 E-value=1.2e+02 Score=23.42 Aligned_cols=48 Identities=19% Similarity=0.340 Sum_probs=30.4
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEec
Q 027296 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILP 203 (225)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLP 203 (225)
.++|+|+|.-+|+- .+++.|+..|+.++-..-.-- .+++.|++-+-+|
T Consensus 19 ~~~I~iiG~G~mG~-------~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~ 66 (209)
T 2raf_A 19 GMEITIFGKGNMGQ-------AIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP 66 (209)
T ss_dssp -CEEEEECCSHHHH-------HHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC
T ss_pred CCEEEEECCCHHHH-------HHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC
Confidence 46899999888873 456777778888764432211 2345676666665
No 123
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=28.94 E-value=33 Score=27.34 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhCCeeEe
Q 027296 156 QELIEILSYALVITKNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~T 175 (225)
.+.++++..++...|.+|++
T Consensus 88 ~~a~~~~~~~~~~~gd~Vl~ 107 (381)
T 1v2d_A 88 TEALYVLLQSLVGPGDEVVV 107 (381)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE
Confidence 34455555555444444443
No 124
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=28.66 E-value=25 Score=28.74 Aligned_cols=21 Identities=10% Similarity=0.131 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 123 ~~al~~~~~~l~~~gd~Vl~~ 143 (430)
T 2x5f_A 123 THGLSLVGDLFVNQDDTILLP 143 (430)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred hHHHHHHHHHHhCCCCEEEEc
Confidence 677888888887778777765
No 125
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=28.63 E-value=25 Score=29.42 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=9.2
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.++++..
T Consensus 120 ~v~~t~G~~~al~~~~~~l 138 (447)
T 3b46_A 120 NVTVTTGANEGILSCLMGL 138 (447)
T ss_dssp GEEEESHHHHHHHHHHHHH
T ss_pred hEEEeCCHHHHHHHHHHHH
Confidence 3445555544444444444
No 126
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=28.59 E-value=46 Score=26.82 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=24.6
Q ss_pred ccchhHHHHHHHHHHHHHhhCCeeEecCCCcchH
Q 027296 150 NMGFMHQELIEILSYALVITKNHIYTSGASGTNA 183 (225)
Q Consensus 150 hvp~~hq~LIEllsyAlvl~gn~i~TSGA~GtNa 183 (225)
++|=-...|.|.+..|+...-.-|+|||++|...
T Consensus 70 iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 70 AVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp EECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred EeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 3444456777888887755568899999999753
No 127
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=28.40 E-value=30 Score=29.57 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHHhh---CCeeEecCCCcchHHHHHhhhh
Q 027296 154 MHQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalr 191 (225)
+-+++++.++.-+-.. ++-++|+|++..|..+++++..
T Consensus 133 le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~ 173 (504)
T 2okj_A 133 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARY 173 (504)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHH
Confidence 4566777777766543 5679999999999999988753
No 128
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=28.30 E-value=35 Score=26.36 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++ .|.+|++.
T Consensus 78 ~~~l~~~~~~~--~gd~vl~~ 96 (337)
T 3p1t_A 78 DECFDRISAEF--SSMRFVTA 96 (337)
T ss_dssp HHHHHHHHHHS--TTSEEEEE
T ss_pred HHHHHHHHHhc--CCCeEEEe
Confidence 44555555554 45555443
No 129
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=28.06 E-value=46 Score=26.23 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=22.6
Q ss_pred hCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEec
Q 027296 138 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 138 ~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TS 176 (225)
-..++|||+|.-+|+- -|+..|+..||.++-.
T Consensus 17 ~~~~kIgiIG~G~mG~-------alA~~L~~~G~~V~~~ 48 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGR-------TMAGALADLGHEVTIG 48 (245)
T ss_dssp --CCEEEEECCSHHHH-------HHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEECCCHHHH-------HHHHHHHHCCCEEEEE
Confidence 3468999999888874 3566677778887643
No 130
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=27.79 E-value=31 Score=27.70 Aligned_cols=9 Identities=22% Similarity=0.298 Sum_probs=5.7
Q ss_pred hCCeeEecC
Q 027296 169 TKNHIYTSG 177 (225)
Q Consensus 169 ~gn~i~TSG 177 (225)
.|..|+++.
T Consensus 131 ~gd~Vl~~~ 139 (401)
T 2bwn_A 131 PGLIIYSDS 139 (401)
T ss_dssp TTCEEEEET
T ss_pred CCCEEEECc
Confidence 566766654
No 131
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=27.62 E-value=71 Score=27.58 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=27.2
Q ss_pred cchhHHHHHHHHHHHH---HhhCCeeEecCCCcchHHHHHhhh
Q 027296 151 MGFMHQELIEILSYAL---VITKNHIYTSGASGTNAAVIRGAL 190 (225)
Q Consensus 151 vp~~hq~LIEllsyAl---vl~gn~i~TSGA~GtNaAvIRGal 190 (225)
.+-+++.|.+.+..-. +-..+-++|+|+++.+.++++..+
T Consensus 136 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 178 (500)
T 3tcm_A 136 IHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI 178 (500)
T ss_dssp CHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc
Confidence 4455666666654321 235678899999988888888775
No 132
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=27.14 E-value=28 Score=28.23 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|.+|+++
T Consensus 111 ~~al~~~~~~l~~~gd~Vl~~ 131 (406)
T 1xi9_A 111 TEALQLIFGALLDPGDEILVP 131 (406)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 344555555554444444443
No 133
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=27.07 E-value=46 Score=25.58 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHH-hhCCeeEecCCCcch
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALV-ITKNHIYTSGASGTN 182 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlv-l~gn~i~TSGA~GtN 182 (225)
++.++ +++.|-.-+. ...+|=-...|.|.+..|+. ..-.-|+|||++|..
T Consensus 35 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 35 LLHEL--LKEAGHKVTS---YEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHH--HHHHTCEEEE---EEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 55444 3455654321 12333334677777777765 245799999999875
No 134
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.94 E-value=53 Score=27.07 Aligned_cols=58 Identities=16% Similarity=0.035 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHhhCCceEEEecccccchhHHHHHHHHH------------------HHHHhhCCeeEecCCCcchHH
Q 027296 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS------------------YALVITKNHIYTSGASGTNAA 184 (225)
Q Consensus 126 vD~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIElls------------------yAlvl~gn~i~TSGA~GtNaA 184 (225)
.|+++=|...++.+ ++||++|-.|+..--..+-+++. ..+...|-.++--|+..++.|
T Consensus 93 ~Dil~aL~~a~~~~-~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~~~~~A 168 (225)
T 2pju_A 93 YDVLQFLAKAGKLT-SSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLA 168 (225)
T ss_dssp HHHHHHHHHTTCTT-SCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHH
T ss_pred HHHHHHHHHHHhhC-CcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHHHHHHH
Confidence 58999999998877 58999999998766554444443 345567777777676666655
No 135
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=26.76 E-value=30 Score=28.04 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHhhCCeeEe
Q 027296 156 QELIEILSYALVITKNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~T 175 (225)
.+.++++..++...|..|++
T Consensus 96 ~~al~~~~~~~~~~gd~Vl~ 115 (411)
T 2o0r_A 96 TEAIAAAVLGLVEPGSEVLL 115 (411)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 34455555554444444443
No 136
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=26.47 E-value=54 Score=26.15 Aligned_cols=20 Identities=20% Similarity=0.125 Sum_probs=9.9
Q ss_pred HHHHHHHHHH---HhhCCeeEec
Q 027296 157 ELIEILSYAL---VITKNHIYTS 176 (225)
Q Consensus 157 ~LIEllsyAl---vl~gn~i~TS 176 (225)
+.++++..++ ...|..|+++
T Consensus 97 ~al~~~~~~l~~~~~~gd~vi~~ 119 (406)
T 3cai_A 97 VLLSLLAEASSSRAGLGYEVIVS 119 (406)
T ss_dssp HHHHHHHHHTGGGGBTTCEEEEE
T ss_pred HHHHHHHHHHhhccCCCCEEEEc
Confidence 4555555555 3345455443
No 137
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=26.32 E-value=1.2e+02 Score=23.32 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=23.9
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g 170 (225)
+-+.|.|+|||++...-...+++-.+=...||...|
T Consensus 126 L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g 161 (295)
T 3hcw_A 126 VIEQGVDELIFITEKGNFEVSKDRIQGFETVASQFN 161 (295)
T ss_dssp HHHHCCSEEEEEEESSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCccEEEEcCCccchhHHHHHHHHHHHHHHcC
Confidence 345799999999876444455555666666665544
No 138
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=26.30 E-value=27 Score=28.72 Aligned_cols=20 Identities=5% Similarity=0.132 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHhhCCeeEe
Q 027296 156 QELIEILSYALVITKNHIYT 175 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~T 175 (225)
++.++++..++...|.+|++
T Consensus 119 ~~al~~~~~~l~~~gd~Vl~ 138 (425)
T 1vp4_A 119 QQALDLIGKLFLDDESYCVL 138 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE
Confidence 45566666666555555554
No 139
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=26.21 E-value=76 Score=27.99 Aligned_cols=122 Identities=17% Similarity=0.226 Sum_probs=66.5
Q ss_pred cccccccccccCCccccCCCC------ccchhhhcccceeeecccccCCChh-HHHHH-HHHHhhCCceEEEecccccch
Q 027296 82 SEEENVIGMFGSDEDVGTQIP------TQAQSVVEGSGAVMVSEFKPVPDVD-YLQEL-LAIQQQGPRAIGFFGTRNMGF 153 (225)
Q Consensus 82 ~~~~~~~~~f~~d~~~~~~ip------tq~~~~v~g~~~v~~~~~~~~p~vD-~lqEL-aaiQq~g~rrIa~lGsRhvp~ 153 (225)
+.++....+||.++. .=| .+.+-.+.|+-.+.. +...++.- --.|+ +.+++.|-++|.-|||||-+
T Consensus 94 dk~~~~~~v~gt~d~---~HPgv~~~~~~g~~~vgG~v~~l~--~~~f~~~~~tP~e~r~~f~~~gw~~VvafqTrNPi- 167 (349)
T 1v47_A 94 DLEALARAVFGTDSE---THPGVARLYGKGPYALAGRVEVLK--PRPRTPLEKTPEEVRAFFRQRGWRKVVAFQTRNAP- 167 (349)
T ss_dssp CHHHHHHHHHSCCCT---TSHHHHHHHHTCSEEEEBCEEESS--CCCCCTTCCCHHHHHHHHHHTTCCSEEEEEESSCC-
T ss_pred CHHHHHHHHhCCCCc---CCcchHHHhhcCCEEEEEEEEEEE--cCCchhhcCCHHHHHHHHHhcCCCeEEEeecCCCC-
Confidence 334445667887664 222 244556777766655 33455433 34566 44567898888889999964
Q ss_pred hHHHHHHHHHHHHHhhCCeeE-ecCC----CcchH----HHHHhhhhccCCC--eeEEEecCcccCCC
Q 027296 154 MHQELIEILSYALVITKNHIY-TSGA----SGTNA----AVIRGALRAERPD--LLTVILPQSLKKQP 210 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~-TSGA----~GtNa----AvIRGalrae~p~--lLTViLPQSL~rQp 210 (225)
|.-=.+|+.+|+-....-++ =+++ ..+.+ ..++-++...=|. .+-.++|-.+.+--
T Consensus 168 -HrgH~~l~~~ale~~d~vll~P~~g~~K~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m~~aG 234 (349)
T 1v47_A 168 -HRAHEYLIRLGLELADGVLVHPILGAKKPDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPMRYAG 234 (349)
T ss_dssp -CHHHHHHHHHHHHHSSEEEEEEBCSCCCTTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCCCCCT
T ss_pred -chHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHhhcCC
Confidence 33335666677766433333 2333 12222 3444555543133 22346777776543
No 140
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=26.09 E-value=46 Score=26.56 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhh
Q 027296 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 191 (225)
+..|.|.++.-+- ..+-++|+|++..|.++|+.++.
T Consensus 83 ~~~l~~~la~~~~-~~~v~~~~gg~~a~~~al~~~~~ 118 (406)
T 4adb_A 83 VLRLAKKLIDATF-ADRVFFCNSGAEANEAALKLARK 118 (406)
T ss_dssp HHHHHHHHHHHSS-CSEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCC-CCeEEEeCcHHHHHHHHHHHHHH
Confidence 5556666655432 23678888888888888886654
No 141
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=26.08 E-value=39 Score=26.49 Aligned_cols=19 Identities=16% Similarity=0.123 Sum_probs=10.6
Q ss_pred CeeEecCCCcchHHHHHhh
Q 027296 171 NHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 171 n~i~TSGA~GtNaAvIRGa 189 (225)
+-++|+|++..+.++++++
T Consensus 78 ~v~~~~g~t~a~~~~~~~~ 96 (390)
T 1elu_A 78 TITITDNVTTGCDIVLWGL 96 (390)
T ss_dssp GEEEESSHHHHHHHHHHHS
T ss_pred HEEEeCChHHHHHHHHhCC
Confidence 3455666655555555554
No 142
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=26.01 E-value=36 Score=27.31 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC-CeeEecC
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTSG 177 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g-n~i~TSG 177 (225)
+.+.|+..-.-.+..|.+..+ ..+.++++..++...| .+|++..
T Consensus 63 lr~~la~~~~~~~~~v~~~~G------~~~ai~~~~~~~~~~g~d~Vl~~~ 107 (356)
T 1fg7_A 63 VIENYAQYAGVKPEQVLVSRG------ADEGIELLIRAFCEPGKDAILYCP 107 (356)
T ss_dssp HHHHHHHHHTSCGGGEEEESH------HHHHHHHHHHHHCCTTTCEEEECS
T ss_pred HHHHHHHHhCCChHHEEEcCC------HHHHHHHHHHHHhCCCCCEEEEeC
Confidence 666777766444445544322 4678888888887777 7777653
No 143
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=25.89 E-value=15 Score=29.09 Aligned_cols=51 Identities=10% Similarity=0.133 Sum_probs=27.6
Q ss_pred cccCCChh-HHHHHHHHH-hhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEec
Q 027296 120 FKPVPDVD-YLQELLAIQ-QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 120 ~~~~p~vD-~lqELaaiQ-q~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TS 176 (225)
|.+.+..+ +-++++..- ..++..|.+..+ -.+.++++..++...|.+|++.
T Consensus 59 y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g------~~~a~~~~~~~l~~~gd~Vl~~ 111 (375)
T 3op7_A 59 YGWIEGSPAFKKSVSQLYTGVKPEQILQTNG------ATGANLLVLYSLIEPGDHVISL 111 (375)
T ss_dssp SCCTTCCHHHHHHHHTTSSSCCGGGEEEESH------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCChHHHHHHHHHHhccCChhhEEEcCC------hHHHHHHHHHHhcCCCCEEEEe
Confidence 44444333 556666543 233444444332 3566777777777777666653
No 144
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=25.74 E-value=38 Score=28.96 Aligned_cols=19 Identities=21% Similarity=0.151 Sum_probs=15.6
Q ss_pred eeE-ecCCCcchHHHHHhhh
Q 027296 172 HIY-TSGASGTNAAVIRGAL 190 (225)
Q Consensus 172 ~i~-TSGA~GtNaAvIRGal 190 (225)
-++ |||+|..+.++|+|.+
T Consensus 71 v~f~t~~~T~a~n~~~~~~~ 90 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA 90 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC
T ss_pred EEEEcCcHHHHHHHHHHhcC
Confidence 455 8888888888888887
No 145
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=25.56 E-value=45 Score=27.48 Aligned_cols=44 Identities=11% Similarity=-0.055 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHh----hCCe---eEecCCC
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI----TKNH---IYTSGAS 179 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl----~gn~---i~TSGA~ 179 (225)
+.++|+..- |.+.|.|..+ -.+-+++.-.++.. .|.+ ++++...
T Consensus 81 l~~~la~~~--~~~~v~~t~g------gt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~ 131 (467)
T 1ax4_A 81 LKDKAKELF--NYDYIIPAHQ------GRGAENILFPVLLKYKQKEGKAKNPVFISNFH 131 (467)
T ss_dssp HHHHHHHHH--CCCEEEEESS------HHHHHHHHHHHHHHHHHHTTCCSSCEEEESSC
T ss_pred HHHHHHHHc--CCCcEEEcCC------cHHHHHHHHHHHHHhhccCCCccceEEEeccc
Confidence 555555543 3345544422 13455666666665 6776 6666333
No 146
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=25.45 E-value=77 Score=25.29 Aligned_cols=37 Identities=11% Similarity=-0.014 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhh
Q 027296 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 191 (225)
.+.+|.|.++.-+- ..+-++|+|++..|.++|+.+..
T Consensus 79 ~~~~l~~~la~~~g-~~~v~~~~~gt~a~~~al~~~~~ 115 (392)
T 3ruy_A 79 QLGPWYEKVAKLTN-KEMVLPMNTGAEAVETAIKTARR 115 (392)
T ss_dssp THHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCEEEEeCcHHHHHHHHHHHHHH
Confidence 45666666665443 45677788888777777875543
No 147
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=25.32 E-value=60 Score=29.91 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=21.0
Q ss_pred hh-HHHHHHHHHhhCCceEEEecc
Q 027296 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (225)
Q Consensus 126 vD-~lqELaaiQq~g~rrIa~lGs 148 (225)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 72 id~l~~~~~~~~~lGi~av~LFgv 95 (356)
T 3obk_A 72 MEDLLKEVGEARSYGIKAFMLFPK 95 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEecC
Confidence 67 889999999999999999995
No 148
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=25.32 E-value=50 Score=25.10 Aligned_cols=50 Identities=20% Similarity=0.374 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC-CeeEecCCCcch
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTSGASGTN 182 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g-n~i~TSGA~GtN 182 (225)
++.++ +.+.|-.-+. -..+|=--..|.+.+..+++..+ .-|+|||+.|..
T Consensus 44 ~L~~~--L~~~G~~v~~---~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 44 IIKQL--LIENGHKIIG---YSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred HHHHH--HHHCCCEEEE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 45443 3456654322 12233333566677777776554 689999999954
No 149
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=25.11 E-value=1.4e+02 Score=22.77 Aligned_cols=36 Identities=11% Similarity=0.009 Sum_probs=24.7
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g 170 (225)
+-++|.|+|||++...-....+.-.+-...+|...|
T Consensus 122 L~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g 157 (288)
T 3gv0_A 122 LAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFG 157 (288)
T ss_dssp HHHTTCCEEEEECCCTTSHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCeEEEEcCCcccchHHHHHHHHHHHHHHcC
Confidence 445799999999876544455656666666666655
No 150
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=25.05 E-value=94 Score=25.53 Aligned_cols=17 Identities=24% Similarity=0.141 Sum_probs=6.2
Q ss_pred eEecCCCcchHHHHHhh
Q 027296 173 IYTSGASGTNAAVIRGA 189 (225)
Q Consensus 173 i~TSGA~GtNaAvIRGa 189 (225)
++|+|++..|.++|+.+
T Consensus 93 ~~t~~gt~A~~~al~~~ 109 (467)
T 2oqx_A 93 IPTHQGRGAEQIYIPVL 109 (467)
T ss_dssp EEEC--CCSHHHHHHHH
T ss_pred EEcCCcHHHHHHHHHHH
Confidence 33444444444444443
No 151
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=24.95 E-value=1.8e+02 Score=20.38 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=15.6
Q ss_pred eeEecCCCcchHHH----HHhhhhccCCCeeEEEe
Q 027296 172 HIYTSGASGTNAAV----IRGALRAERPDLLTVIL 202 (225)
Q Consensus 172 ~i~TSGA~GtNaAv----IRGalrae~p~lLTViL 202 (225)
.++..|-+|.+..- +.-.+...+|+++.|.+
T Consensus 40 ~v~n~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~ 74 (185)
T 3hp4_A 40 VLINASISGETSGGALRRLDALLEQYEPTHVLIEL 74 (185)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred EEEECCcCCccHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 45555656655432 22333334777766654
No 152
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=24.73 E-value=40 Score=27.18 Aligned_cols=21 Identities=10% Similarity=-0.069 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 114 ~~al~~~~~~l~~~gd~vl~~ 134 (416)
T 1bw0_A 114 SHGILMAITAICDAGDYALVP 134 (416)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 456666666665556655554
No 153
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=24.71 E-value=42 Score=27.20 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHh-hCCeeEecCCCcchHHHHHhhhh
Q 027296 156 QELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 156 q~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalr 191 (225)
..+.|.++.-+-. ..+-++|+|++..+.++++++++
T Consensus 64 ~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~ 100 (432)
T 3a9z_A 64 NTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVR 100 (432)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHh
Confidence 5666666665533 25789999999999999999874
No 154
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=24.58 E-value=73 Score=26.15 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=23.0
Q ss_pred hhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEec
Q 027296 137 QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 137 q~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TS 176 (225)
....++|||+|.-+|+- -|+..|+..|+.++--
T Consensus 28 ~~~~~~I~iIG~G~mG~-------~~a~~l~~~G~~V~~~ 60 (320)
T 4dll_A 28 DPYARKITFLGTGSMGL-------PMARRLCEAGYALQVW 60 (320)
T ss_dssp -CCCSEEEEECCTTTHH-------HHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECccHHHH-------HHHHHHHhCCCeEEEE
Confidence 34456999999999984 3555666778877643
No 155
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=24.54 E-value=66 Score=29.43 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=21.8
Q ss_pred hh-HHHHHHHHHhhCCceEEEecc
Q 027296 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (225)
Q Consensus 126 vD-~lqELaaiQq~g~rrIa~lGs 148 (225)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 68 id~l~~~~~~~~~lGi~~v~LFgv 91 (342)
T 1h7n_A 68 VNRLKDYLKPLVAKGLRSVILFGV 91 (342)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEecc
Confidence 68 999999999999999999997
No 156
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=24.49 E-value=19 Score=27.15 Aligned_cols=15 Identities=27% Similarity=0.277 Sum_probs=12.5
Q ss_pred hhCCeeEecCCCcch
Q 027296 168 ITKNHIYTSGASGTN 182 (225)
Q Consensus 168 l~gn~i~TSGA~GtN 182 (225)
..||.||+||=.|.+
T Consensus 25 ~~g~~lfvSGq~~~d 39 (128)
T 3kjj_A 25 GANGLIFLSGMVPEN 39 (128)
T ss_dssp EETTEEEECCBCCSS
T ss_pred EECCEEEEeecCCCC
Confidence 469999999988765
No 157
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=24.47 E-value=60 Score=26.69 Aligned_cols=36 Identities=14% Similarity=-0.009 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhh
Q 027296 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 189 (225)
.+.+|-|.|+.-+--..+-++|+|++-.|.++||.|
T Consensus 97 ~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~a 132 (434)
T 2epj_A 97 AEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLA 132 (434)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 456677766654422346688999888888888875
No 158
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=24.43 E-value=16 Score=27.24 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.4
Q ss_pred hhCCeeEecCCCcch
Q 027296 168 ITKNHIYTSGASGTN 182 (225)
Q Consensus 168 l~gn~i~TSGA~GtN 182 (225)
..|+.||+||-.|.+
T Consensus 19 ~~g~~lfvSGq~~~d 33 (124)
T 3gtz_A 19 IYNNTLWYTGVPENL 33 (124)
T ss_dssp EETTEEEEEECCSCT
T ss_pred EECCEEEEeccCCCC
Confidence 459999999987765
No 159
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=24.42 E-value=3.4e+02 Score=23.33 Aligned_cols=112 Identities=17% Similarity=0.194 Sum_probs=64.7
Q ss_pred hcccceeeecccccCCChh--HHHHHHH-HHhhCCceEEEeccc--ccchhHHHHHHHHHHHHHhhCC---eeEecCCCc
Q 027296 109 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKN---HIYTSGASG 180 (225)
Q Consensus 109 v~g~~~v~~~~~~~~p~vD--~lqELaa-iQq~g~rrIa~lGsR--hvp~~hq~LIEllsyAlvl~gn---~i~TSGA~G 180 (225)
.+|.-.....+|..=-+|| -+++|.. +-+.|-.-|.++||- -.-..+.+-.|++..+.-..+. -|+-.|+..
T Consensus 32 ~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 111 (343)
T 2v9d_A 32 FTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTN 111 (343)
T ss_dssp SCEECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSC
T ss_pred cCCeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5677777777776433355 4555554 446899999999984 4455566666666665544443 345556556
Q ss_pred chHHH--HHhhhhccCCCeeEEEecCcccCCChhHHHHHHHhh
Q 027296 181 TNAAV--IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVR 221 (225)
Q Consensus 181 tNaAv--IRGalrae~p~lLTViLPQSL~rQp~Es~elLe~V~ 221 (225)
|..|+ .|-|-++ ..+-+-|+-|--.+--..+..+-.+.|.
T Consensus 112 t~eai~la~~A~~~-Gadavlv~~P~Y~~~s~~~l~~~f~~VA 153 (343)
T 2v9d_A 112 ARETIELSQHAQQA-GADGIVVINPYYWKVSEANLIRYFEQVA 153 (343)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCCCCCCCHHHHHHHHHHHH
Confidence 65554 3444444 6777777766543322233333334443
No 160
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=24.39 E-value=2.7e+02 Score=22.25 Aligned_cols=128 Identities=15% Similarity=0.142 Sum_probs=65.8
Q ss_pred ccccCCccccCCCCccchh-hhcccceeeecccccCCChhHHHHHHHHHhhCCceEEEecccccchhHHHHHH-HHHHHH
Q 027296 89 GMFGSDEDVGTQIPTQAQS-VVEGSGAVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIE-ILSYAL 166 (225)
Q Consensus 89 ~~f~~d~~~~~~iptq~~~-~v~g~~~v~~~~~~~~p~vD~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIE-llsyAl 166 (225)
.++..|++.|...=..... +-+..+.|+..++-+..+-|+-..|..|++.++..|.++..-. --...++. +....+
T Consensus 143 aii~~~~~~g~~~~~~~~~~~~~~g~~vv~~~~~~~~~~d~~~~l~~i~~~~pd~v~~~~~~~--~~~~~~~~~~~~~g~ 220 (371)
T 4f06_A 143 AIAVSDYGPGIDAETAFKKTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAG--PPTLGFVKAYIDNGL 220 (371)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHTCSEEEEECCTT--HHHHHHHHHHHHTTT
T ss_pred EEEcCCcccchhHHHHHHHHHHhcCCceEEEEecCcccccHHHHHHHHHhcCCCEEEEEeccC--chhhHHHHHHHHhhh
Confidence 3555666655433222222 2233345556666665667899999999999999986543211 01111121 111223
Q ss_pred HhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecCcccCCChhHHHHHHHhh
Q 027296 167 VITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVR 221 (225)
Q Consensus 167 vl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~rQp~Es~elLe~V~ 221 (225)
-..+..++..|.. .+...+..+-.+ .+-+.+..|-......|+.++..+...
T Consensus 221 ~~~~~~~~~~~~~-~~~~~~~~~~~~--~~g~~~~~~~~~~~~~p~~~~f~~~~~ 272 (371)
T 4f06_A 221 KAGGVKLMSTGDV-VTEPDLPNIGEA--GLGILSTYHYAVSHDSPENKAFLALLQ 272 (371)
T ss_dssp TTTTCEEEEEGGG-GCGGGHHHHCGG--GTTCEEEESCCTTCCSHHHHHHHHHHH
T ss_pred hccCcEEEEeccc-CCHHHHHhcccc--cCceEEeeccccCCCChhHHHHHHHHH
Confidence 3344555555433 333333333222 222334445556667788888776654
No 161
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=24.36 E-value=55 Score=25.46 Aligned_cols=52 Identities=10% Similarity=0.027 Sum_probs=28.4
Q ss_pred ccccCCChh-HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCC
Q 027296 119 EFKPVPDVD-YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGA 178 (225)
Q Consensus 119 ~~~~~p~vD-~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA 178 (225)
.|.+-|... +-++|++.- |.+.+.++++- . +-+++...++...|.+|+++.-
T Consensus 33 ~y~~~~~~~~l~~~la~~~--g~~~~~~~~~g----t--~a~~~~~~~~~~~gd~Vl~~~~ 85 (347)
T 1jg8_A 33 VYGEDPTINELERLAAETF--GKEAALFVPSG----T--MGNQVSIMAHTQRGDEVILEAD 85 (347)
T ss_dssp GGTCCHHHHHHHHHHHHHH--TCSEEEEESCH----H--HHHHHHHHHHCCTTCEEEEETT
T ss_pred ccCCChHHHHHHHHHHHHh--CCceEEEecCc----H--HHHHHHHHHhcCCCCEEEEcCc
Confidence 344434443 555566554 44566565542 1 2234555666777888887644
No 162
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=24.32 E-value=2.6e+02 Score=22.56 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=29.5
Q ss_pred HHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCCCc
Q 027296 133 LAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASG 180 (225)
Q Consensus 133 aaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA~G 180 (225)
.+++..|.||||++++. + ..+-+.+...|...|=.++...+.|
T Consensus 110 ~al~~~g~~rvglltpy----~-~~~~~~~~~~l~~~Giev~~~~~~~ 152 (240)
T 3ixl_A 110 NGLRALGVRRVALATAY----I-DDVNERLAAFLAEESLVPTGCRSLG 152 (240)
T ss_dssp HHHHHTTCSEEEEEESS----C-HHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHhCCCEEEEEeCC----h-HHHHHHHHHHHHHCCCEEeccccCC
Confidence 45677799999999972 2 3344555556666787777766655
No 163
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=24.18 E-value=70 Score=29.15 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=21.3
Q ss_pred hh-HHHHHHHHHhhCCceEEEecc
Q 027296 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (225)
Q Consensus 126 vD-~lqELaaiQq~g~rrIa~lGs 148 (225)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 58 id~l~~~~~~~~~~Gi~~v~LFgv 81 (330)
T 1pv8_A 58 VKRLEEMLRPLVEEGLRCVLIFGV 81 (330)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEecC
Confidence 67 889999999999999999996
No 164
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=24.17 E-value=34 Score=27.84 Aligned_cols=21 Identities=14% Similarity=0.025 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|..|++.
T Consensus 112 t~a~~~~~~~~~~~gd~Vl~~ 132 (409)
T 2gb3_A 112 SEAILFSFAVIANPGDEILVL 132 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 456666666665556555554
No 165
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=24.07 E-value=34 Score=27.60 Aligned_cols=22 Identities=9% Similarity=-0.017 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhhCCeeEec
Q 027296 155 HQELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TS 176 (225)
-.+.++++..++...|.+|++.
T Consensus 110 ~t~al~~~~~~l~~~gd~Vl~~ 131 (389)
T 1o4s_A 110 AKQALFNAFMALLDPGDEVIVF 131 (389)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEc
Confidence 3556666666665556555544
No 166
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.97 E-value=54 Score=25.77 Aligned_cols=51 Identities=18% Similarity=0.316 Sum_probs=31.0
Q ss_pred HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhh-CCeeEecCCCcchH
Q 027296 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVIT-KNHIYTSGASGTNA 183 (225)
Q Consensus 128 ~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~-gn~i~TSGA~GtNa 183 (225)
++.+ .+++.|-.-+. ...+|=--..|.|.+..|+... -.-|+|||++|...
T Consensus 44 ~L~~--~l~~~G~~v~~---~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 44 IIKQ--LLIENGHKIIG---YSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHH--HHHHTTCEEEE---EEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred HHHH--HHHHCCCEEEE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 4444 34556654321 1233333567778888877652 47899999999753
No 167
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=23.94 E-value=30 Score=28.02 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhh--CCeeE-ecCCCcchHHHHHhhhh
Q 027296 155 HQELIEILSYALVIT--KNHIY-TSGASGTNAAVIRGALR 191 (225)
Q Consensus 155 hq~LIEllsyAlvl~--gn~i~-TSGA~GtNaAvIRGalr 191 (225)
...+.|.++.-+-.. .+-++ |+|++..+.+++++.++
T Consensus 80 ~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~ 119 (398)
T 2fyf_A 80 VGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID 119 (398)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcC
Confidence 455666666555443 24466 88888888888888753
No 168
>1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=23.92 E-value=2.1e+02 Score=24.77 Aligned_cols=47 Identities=23% Similarity=0.286 Sum_probs=35.7
Q ss_pred HHHHHHHHHh--hCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecCC
Q 027296 128 YLQELLAIQQ--QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGA 178 (225)
Q Consensus 128 ~lqELaaiQq--~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSGA 178 (225)
.++||+.-+. ...+.|||-||.==.=+ -+|++..|...|..++|+|.
T Consensus 86 ~l~~la~~~~~~~~~~vI~VTGTnGKTTT----~~~l~~iL~~~g~~~~t~g~ 134 (452)
T 1gg4_A 86 AFGELAAWVRQQVPARVVALTGSSGKTSV----KEMTAAILSQCGNTLYTAGN 134 (452)
T ss_dssp HHHHHHHHHHHHSCCEEEEEECSSCHHHH----HHHHHHHHTTTSCEEECCTT
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCcHHH----HHHHHHHHHhcCCEeecccc
Confidence 8899988765 35689999999754433 56777777778888888876
No 169
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=23.89 E-value=54 Score=27.16 Aligned_cols=59 Identities=14% Similarity=0.116 Sum_probs=32.2
Q ss_pred hh-HHHHHHHHHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeEecC-CCcchHHHHHhhhhc
Q 027296 126 VD-YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRA 192 (225)
Q Consensus 126 vD-~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalra 192 (225)
++ +.+.|+++- |...+-++++- .+-++++-.+++..|.+|+++- .-+.+...++..++.
T Consensus 68 ~~~l~~~la~~~--g~~~~~~~~sG------t~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~ 128 (392)
T 3qhx_A 68 RTALEAALAAVE--DAAFGRAFSSG------MAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTG 128 (392)
T ss_dssp HHHHHHHHHHHT--TCSEEEEESSH------HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHh--CCCcEEEECCH------HHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHh
Confidence 44 555666653 44456566552 3556777777777787877654 333333334333333
No 170
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=23.86 E-value=64 Score=29.33 Aligned_cols=23 Identities=26% Similarity=0.384 Sum_probs=20.5
Q ss_pred hh-HHHHHHHHHhhCCceEEEecc
Q 027296 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (225)
Q Consensus 126 vD-~lqELaaiQq~g~rrIa~lGs 148 (225)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 57 id~l~~~~~~~~~lGi~~v~LFgv 80 (323)
T 1l6s_A 57 EKHLAREIERIANAGIRSVMTFGI 80 (323)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCC
Confidence 57 889999999999999999986
No 171
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=23.71 E-value=69 Score=29.27 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=21.2
Q ss_pred hh-HHHHHHHHHhhCCceEEEecc
Q 027296 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (225)
Q Consensus 126 vD-~lqELaaiQq~g~rrIa~lGs 148 (225)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 65 id~l~~~~~~~~~lGi~~v~LFgv 88 (337)
T 1w5q_A 65 IDQLLIEAEEWVALGIPALALFPV 88 (337)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEecC
Confidence 67 889999999999999999997
No 172
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=23.64 E-value=62 Score=25.70 Aligned_cols=32 Identities=25% Similarity=0.100 Sum_probs=23.1
Q ss_pred cchhHHHHHHHHHHHHHh-hCCeeEecCCCcch
Q 027296 151 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (225)
Q Consensus 151 vp~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (225)
+|==-..|.|.+..|+.. .-.-|+|||++|..
T Consensus 59 v~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g 91 (189)
T 1jlj_A 59 VPDEIEEIKETLIDWCDEKELNLILTTGGTGFA 91 (189)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred eCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 333346777788777753 45789999999975
No 173
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=23.61 E-value=77 Score=29.04 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=34.4
Q ss_pred ccccCCC---hh-HHHHHHHHHh-hCCceEEEecc-ccc-c--hhHHHHHHHHHHHHHhhCCeeEecC
Q 027296 119 EFKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGT-RNM-G--FMHQELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 119 ~~~~~p~---vD-~lqELaaiQq-~g~rrIa~lGs-Rhv-p--~~hq~LIEllsyAlvl~gn~i~TSG 177 (225)
+++++.= +| ++++|..|++ .|+..|+++++ ++. . ++++.+.. + +..+++.+.+
T Consensus 74 ~~~~isWdeAl~~ia~~l~~i~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~----~--~G~~n~~~~~ 135 (727)
T 2e7z_A 74 RWERISWDQALDEIAEKLKKIIAKYGPESLGVSQTEINQQSEYGTLRRFMN----L--LGSPNWTSAM 135 (727)
T ss_dssp CEEECCHHHHHHHHHHHHHHHHHHHCGGGEEEEECGGGTCCCTTHHHHHHH----H--HTCCCEECGG
T ss_pred CeEEecHHHHHHHHHHHHHHHHHhhCCcEEEEEeCCCCCccchHHHHHHHH----H--cCCCCccCCc
Confidence 3555552 66 7788888876 49999999965 333 4 66655543 3 4667777744
No 174
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=23.56 E-value=34 Score=32.29 Aligned_cols=19 Identities=37% Similarity=0.576 Sum_probs=14.2
Q ss_pred eEecCC--CcchHHHHHhhhhc
Q 027296 173 IYTSGA--SGTNAAVIRGALRA 192 (225)
Q Consensus 173 i~TSGA--~GtNaAvIRGalra 192 (225)
|+|||+ .|.||| |||+.+.
T Consensus 77 IltsGGdaPGmNa~-Ir~vv~~ 97 (555)
T 2f48_A 77 IILSGGPAPGGHNV-ISGVFDA 97 (555)
T ss_dssp EEEBSSCCTTHHHH-HHHHHHH
T ss_pred EECcCCCcHhHHHH-HHHHHHH
Confidence 579998 699975 4777665
No 175
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=23.52 E-value=41 Score=27.14 Aligned_cols=37 Identities=35% Similarity=0.567 Sum_probs=21.5
Q ss_pred cCCChhHHHHH-HHHHhhCCceEEEecccc---cchhHHHH
Q 027296 122 PVPDVDYLQEL-LAIQQQGPRAIGFFGTRN---MGFMHQEL 158 (225)
Q Consensus 122 ~~p~vD~lqEL-aaiQq~g~rrIa~lGsRh---vp~~hq~L 158 (225)
++|=+....+. .++...|.+|||+|||+- -++....|
T Consensus 99 ~iPvi~i~~~~~~~a~~~~~~rVgvLaT~~T~~s~~y~~~l 139 (231)
T 3ojc_A 99 GLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFYRGRL 139 (231)
T ss_dssp CSCBCCHHHHHHHHHHHTTCCEEEEESCHHHHHSTTTHHHH
T ss_pred CCCEeccHHHHHHHHHHcCCCEEEEEcCHHHhhchHHHHHH
Confidence 45544433322 234457889999999874 45554433
No 176
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=23.49 E-value=1.6e+02 Score=22.25 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=24.7
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKN 171 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn 171 (225)
+-+.|.|+||+++...-...++.-.+=...+|...|-
T Consensus 126 L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 162 (292)
T 3k4h_A 126 LISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADI 162 (292)
T ss_dssp HHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCC
Confidence 4457999999998765445555556666666655553
No 177
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=23.39 E-value=34 Score=32.79 Aligned_cols=32 Identities=6% Similarity=0.024 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhc
Q 027296 159 IEILSYALVITKNHIYTSGASGTNAAVIRGALRA 192 (225)
Q Consensus 159 IEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 192 (225)
+.++-.|++..|.+|++. .-+..+++.|+..+
T Consensus 224 n~~ai~al~~pGD~VLv~--r~~H~S~~~~l~ls 255 (715)
T 3n75_A 224 NKIVGMYSAPAGSTILID--RNCHKSLTHLMMMS 255 (715)
T ss_dssp HHHHHHHHCCTTCEEEEE--SSCCHHHHHHHHHS
T ss_pred HHHHHHHhCCCCCEEEEC--CCccHHHHHHHHHc
Confidence 344556677777777765 33445566654433
No 178
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=23.39 E-value=1.4e+02 Score=22.61 Aligned_cols=37 Identities=3% Similarity=-0.172 Sum_probs=25.2
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKN 171 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn 171 (225)
+-++|.|+|||++...-...++.-.+-...+|...|-
T Consensus 122 L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~ 158 (289)
T 3g85_A 122 FAKKRYKSAAAILTESLNDAMDNRNKGFIETCHKNGI 158 (289)
T ss_dssp HHHTTCCBCEEEECCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHcCCCEEEEEeCCcccccHHHHHHHHHHHHHHcCC
Confidence 3457999999998765444556566666667766553
No 179
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=23.27 E-value=36 Score=28.77 Aligned_cols=35 Identities=9% Similarity=0.104 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHh-------hCCeeEecCCCcchHHHHHhh
Q 027296 155 HQELIEILSYALVI-------TKNHIYTSGASGTNAAVIRGA 189 (225)
Q Consensus 155 hq~LIEllsyAlvl-------~gn~i~TSGA~GtNaAvIRGa 189 (225)
+..|-|.++.-+.. ..+-++|+|++....+++++.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l 143 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISL 143 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 45566666554432 235677778777777777765
No 180
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=23.04 E-value=42 Score=27.72 Aligned_cols=18 Identities=6% Similarity=-0.149 Sum_probs=8.5
Q ss_pred HHHHHHHHhhCCeeEecC
Q 027296 160 EILSYALVITKNHIYTSG 177 (225)
Q Consensus 160 EllsyAlvl~gn~i~TSG 177 (225)
+.+-.++...|..|++..
T Consensus 138 ~~al~~l~~~gd~vl~~~ 155 (427)
T 2w8t_A 138 LGIISTLAGKGEYVILDA 155 (427)
T ss_dssp HHHHHHHSCTTCEEEEET
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 333344444555555543
No 181
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=23.03 E-value=58 Score=26.56 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=9.9
Q ss_pred HHHHHHHHHH-HhhCCeeEec
Q 027296 157 ELIEILSYAL-VITKNHIYTS 176 (225)
Q Consensus 157 ~LIEllsyAl-vl~gn~i~TS 176 (225)
+.++++..++ ...|.+|+++
T Consensus 68 ~al~~~~~~~~~~~gd~Vl~~ 88 (418)
T 2c81_A 68 TALMLALEALGIGEGDEVIVP 88 (418)
T ss_dssp HHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCcCEEEEC
Confidence 4455555555 4445555443
No 182
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=23.00 E-value=64 Score=25.94 Aligned_cols=32 Identities=13% Similarity=0.110 Sum_probs=22.7
Q ss_pred cchhHHHHHHHHHHHHHh-hCCeeEecCCCcch
Q 027296 151 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (225)
Q Consensus 151 vp~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (225)
+|==...|.|.|..++.. .-.-|+|||++|..
T Consensus 47 V~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g 79 (195)
T 1di6_A 47 IPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPA 79 (195)
T ss_dssp EESCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred eCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 333346777777777653 45789999999965
No 183
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=22.98 E-value=63 Score=25.38 Aligned_cols=21 Identities=10% Similarity=0.131 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
.+.++++..++...|..+++.
T Consensus 81 t~al~~~~~~~~~~gd~vi~~ 101 (376)
T 3f0h_A 81 TGSMEAVVMNCFTKKDKVLVI 101 (376)
T ss_dssp HHHHHHHHHHHCCTTCCEEEE
T ss_pred hHHHHHHHHhccCCCCeEEEE
Confidence 366777777887777777655
No 184
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=22.81 E-value=46 Score=29.09 Aligned_cols=41 Identities=17% Similarity=0.164 Sum_probs=30.0
Q ss_pred cchhHHHHHHHHHHHHHhh---CCeeEecCCCcchHHHHHhhhh
Q 027296 151 MGFMHQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 151 vp~~hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalr 191 (225)
+..+.+++++.++.-+-.. ++-++|+|++..|..++..+..
T Consensus 133 ~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~ 176 (511)
T 3vp6_A 133 FVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARY 176 (511)
T ss_dssp HHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHH
Confidence 3445667777777666554 4678999999999988887765
No 185
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=22.81 E-value=2.1e+02 Score=24.81 Aligned_cols=23 Identities=30% Similarity=0.583 Sum_probs=11.3
Q ss_pred HHHHHHHHHhhCC---ceEEEecccc
Q 027296 128 YLQELLAIQQQGP---RAIGFFGTRN 150 (225)
Q Consensus 128 ~lqELaaiQq~g~---rrIa~lGsRh 150 (225)
++||.+++.++|. +..-|+|.||
T Consensus 258 ~l~~r~~~~~~g~~~~~v~L~~G~R~ 283 (393)
T 4dql_A 258 FVQARKQLKEQGQSLGEAHLYFGCRS 283 (393)
T ss_dssp HHHHHHHHHHTTCCCCCEEEEEEESC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEEECC
Confidence 5555555444442 2345555555
No 186
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=22.55 E-value=34 Score=33.90 Aligned_cols=18 Identities=44% Similarity=0.427 Sum_probs=14.2
Q ss_pred eEecCC--CcchHHHHHhhhh
Q 027296 173 IYTSGA--SGTNAAVIRGALR 191 (225)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (225)
|+|||+ .|.||| |||+.|
T Consensus 398 IltsGGdapGmNaa-Iravv~ 417 (787)
T 3o8o_A 398 IVHVGAPSAALNAA-TRAATL 417 (787)
T ss_dssp EEEESSCCSSHHHH-HHHHHH
T ss_pred EEccCCCCHHHHHH-HHHHHH
Confidence 689998 899975 677665
No 187
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=22.40 E-value=15 Score=27.30 Aligned_cols=15 Identities=20% Similarity=0.527 Sum_probs=12.4
Q ss_pred hhCCeeEecCCCcch
Q 027296 168 ITKNHIYTSGASGTN 182 (225)
Q Consensus 168 l~gn~i~TSGA~GtN 182 (225)
..|+.||+||-.|.+
T Consensus 16 ~~g~~vfvSGq~~~d 30 (122)
T 3k12_A 16 LHGNTVYIGGQVADD 30 (122)
T ss_dssp EETTEEEEEEECCSS
T ss_pred EECCEEEEeeccCCC
Confidence 458999999987765
No 188
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=22.37 E-value=2.2e+02 Score=21.84 Aligned_cols=28 Identities=11% Similarity=0.153 Sum_probs=20.4
Q ss_pred ceEEEecccccchhHHHHHHHHHHHHHhhCCeeEe
Q 027296 141 RAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT 175 (225)
Q Consensus 141 rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~T 175 (225)
.+|+|+|.-+|+- .++++|+..|+.++-
T Consensus 24 mkI~IIG~G~mG~-------~la~~l~~~g~~V~~ 51 (220)
T 4huj_A 24 TTYAIIGAGAIGS-------ALAERFTAAQIPAII 51 (220)
T ss_dssp CCEEEEECHHHHH-------HHHHHHHHTTCCEEE
T ss_pred CEEEEECCCHHHH-------HHHHHHHhCCCEEEE
Confidence 6899999887774 345666677887765
No 189
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=22.36 E-value=1.5e+02 Score=22.74 Aligned_cols=36 Identities=11% Similarity=-0.014 Sum_probs=26.0
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhCC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKN 171 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn 171 (225)
+-+.|.|+|||++...-. .++.-.+=...||...|-
T Consensus 121 L~~~G~~~I~~i~~~~~~-~~~~R~~Gf~~al~~~g~ 156 (289)
T 3k9c_A 121 LTELGHRNIAHIDGADAP-GGADRRAGFLAAMDRHGL 156 (289)
T ss_dssp HHHTTCCSEEEECCTTST-THHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCcEEEEeCCCCc-cHHHHHHHHHHHHHHCCC
Confidence 345799999999887644 666667777777766654
No 190
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=22.09 E-value=55 Score=26.78 Aligned_cols=22 Identities=5% Similarity=0.185 Sum_probs=16.4
Q ss_pred CCeeEecCCCcchHHHHHhhhh
Q 027296 170 KNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 170 gn~i~TSGA~GtNaAvIRGalr 191 (225)
.+-++|+|++..+.++|+.+.+
T Consensus 120 ~~v~~~~g~~ea~~~a~~~~~~ 141 (421)
T 3l8a_A 120 EDILFIDGVVPAISIALQAFSE 141 (421)
T ss_dssp GGEEEESCHHHHHHHHHHHHSC
T ss_pred HHEEEcCCHHHHHHHHHHHhcC
Confidence 3577888888777788887643
No 191
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=22.05 E-value=1.6e+02 Score=22.74 Aligned_cols=36 Identities=14% Similarity=-0.010 Sum_probs=24.0
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g 170 (225)
+-+.|.|+|||++...-...+++-.+=...+|...|
T Consensus 139 L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g 174 (305)
T 3huu_A 139 LYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVK 174 (305)
T ss_dssp HHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcC
Confidence 445799999999876544555555666666665544
No 192
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=22.02 E-value=1.5e+02 Score=22.85 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=24.6
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g 170 (225)
+-+.|.|+|||++...-...+++-.+=...||...|
T Consensus 121 L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g 156 (294)
T 3qk7_A 121 LLELGHQRIAFVSTDARISYVDQRLQGYVQTMSEAG 156 (294)
T ss_dssp HHHTTCCCEEEEEESSCCHHHHHHHHHHHHHHHTTT
T ss_pred HHHCCCceEEEEeCCcccchHHHHHHHHHHHHHHCC
Confidence 445799999999876544455555666666666555
No 193
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=22.00 E-value=1.5e+02 Score=22.75 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=25.9
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g 170 (225)
+-+.|.|+|||++...-...++.-.+=...||...|
T Consensus 126 L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g 161 (301)
T 3miz_A 126 LLERGHRRIGYIRLNPILLGAELRLDAFRRTTSEFG 161 (301)
T ss_dssp HHTTTCCSEEEEECCTTSHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCeEEEEecCccchhHHHHHHHHHHHHHHcC
Confidence 445899999999876555566666666666776655
No 194
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=21.99 E-value=1.4e+02 Score=26.61 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=29.5
Q ss_pred HHHHHHHhh----CCeeE--ecCCCcchHHHHHhhhhccCCCeeEEEecCcccCCChhHHHHHH
Q 027296 161 ILSYALVIT----KNHIY--TSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLA 218 (225)
Q Consensus 161 llsyAlvl~----gn~i~--TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~rQp~Es~elLe 218 (225)
++.+|.... |..|+ |||-+|.-.|..-..+-- -.+|++|... +++-+++++
T Consensus 148 ~i~~a~~~G~l~~g~tVV~aSsGN~G~AlA~aaa~~Gi----~~~IvmP~~~---s~~k~~~l~ 204 (435)
T 1jbq_A 148 MIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGY----RCIIVMPEKM---SSEKVDVLR 204 (435)
T ss_dssp HHHHHHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTC----EEEEEECSCC---CHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCHHHHHHHHHHHHcCC----eEEEEeCCCC---CHHHHHHHH
Confidence 445565443 36788 777666655554333332 4688999764 455555544
No 195
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=21.97 E-value=1.3e+02 Score=24.79 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecCcccC
Q 027296 157 ELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKK 208 (225)
Q Consensus 157 ~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~r 208 (225)
-+.-++.+|+...-.+|+|.|++.-|.+.-=.+.-+..==..+|++|.....
T Consensus 54 ~a~~~l~~a~~~g~~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~ 105 (338)
T 1tzj_A 54 KLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNY 105 (338)
T ss_dssp HHHTTHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCc
Confidence 3344556666544467887654443432211111111223468889987643
No 196
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=21.94 E-value=79 Score=26.13 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=23.4
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeEe
Q 027296 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT 175 (225)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn~i~T 175 (225)
.+||||+|--+|+.- |+.-|+..||.++-
T Consensus 5 s~kIgfIGLG~MG~~-------mA~~L~~~G~~V~v 33 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTP-------IAEILLEAGYELVV 33 (297)
T ss_dssp CCEEEEECCSTTHHH-------HHHHHHHTTCEEEE
T ss_pred CCcEEEEecHHHHHH-------HHHHHHHCCCeEEE
Confidence 368999999999963 67777888998863
No 197
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=21.90 E-value=50 Score=26.26 Aligned_cols=15 Identities=7% Similarity=0.005 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHhhC
Q 027296 156 QELIEILSYALVITK 170 (225)
Q Consensus 156 q~LIEllsyAlvl~g 170 (225)
++.++++..++...|
T Consensus 101 ~~al~~~~~~~~~~g 115 (396)
T 3jtx_A 101 REALFSFVQTVLNPV 115 (396)
T ss_dssp HHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHHHhCCC
Confidence 445555555555443
No 198
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=21.72 E-value=1.6e+02 Score=22.69 Aligned_cols=36 Identities=17% Similarity=0.058 Sum_probs=24.6
Q ss_pred HHhhCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 027296 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (225)
Q Consensus 135 iQq~g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~g 170 (225)
+-+.|.|+|||++...-...+++-.+=...+|...|
T Consensus 126 L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g 161 (303)
T 3kke_A 126 LITLGHSRIAFISGTAIHDTAQRRKEGYLETLASAG 161 (303)
T ss_dssp HHHTTCCSEEEEESCSSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCeEEEEeCCCcCccHHHHHHHHHHHHHHcC
Confidence 445799999999765444555666666666666655
No 199
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=21.64 E-value=79 Score=26.20 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhh
Q 027296 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 191 (225)
.+..|.|.|+.-+-..-.-++|+|++-.|.++|+.+.+
T Consensus 92 ~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~ 129 (452)
T 3n5m_A 92 PAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQ 129 (452)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHH
Confidence 45556666554432111278899998888899998873
No 200
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=21.52 E-value=37 Score=33.42 Aligned_cols=18 Identities=44% Similarity=0.783 Sum_probs=13.9
Q ss_pred eEecCC--CcchHHHHHhhhh
Q 027296 173 IYTSGA--SGTNAAVIRGALR 191 (225)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (225)
|+|||+ .|.|| ||||+.|
T Consensus 20 IltsGGdaPGmNa-aIravvr 39 (762)
T 3o8l_A 20 VLTSGGDAQGMNA-AVRAVVR 39 (762)
T ss_dssp EECCSSCCTTHHH-HHHHHHH
T ss_pred EEccCCCchhHhH-HHHHHHH
Confidence 579996 89997 4677766
No 201
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=21.51 E-value=85 Score=23.56 Aligned_cols=40 Identities=23% Similarity=0.366 Sum_probs=25.9
Q ss_pred cCCChh-HHHHHHHHHhhCCceEEEecccccchhHHHHHHHH
Q 027296 122 PVPDVD-YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEIL 162 (225)
Q Consensus 122 ~~p~vD-~lqELaaiQq~g~rrIa~lGsRhvp~~hq~LIEll 162 (225)
..++.+ .++++..+-+.| -.|-+.|++++.-++..|+|.|
T Consensus 121 ~~~d~~eai~~~~~~~~~g-DvVLv~Gsg~~~~~~~~l~~~l 161 (163)
T 3mvn_A 121 SADDVDELVMRIVQQAKPN-DHILIMSNGAFGGIHQKLLTAL 161 (163)
T ss_dssp EESSHHHHHHHHHHHCCTT-CEEEEECSSCGGGHHHHHHHHT
T ss_pred EECCHHHHHHHHHHhCCCC-CEEEEECCCCHHHHHHHHHHHH
Confidence 345554 555554443333 4778888888888888888754
No 202
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=21.49 E-value=66 Score=25.83 Aligned_cols=26 Identities=19% Similarity=0.341 Sum_probs=19.1
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHhhCC
Q 027296 139 GPRAIGFFGTRNMGFMHQELIEILSYALVITKN 171 (225)
Q Consensus 139 g~rrIa~lGsRhvp~~hq~LIEllsyAlvl~gn 171 (225)
.+.+|+|+|.-+|+.. +++.|+..|+
T Consensus 6 ~~mkI~IiGaG~vG~~-------~a~~l~~~g~ 31 (319)
T 1lld_A 6 KPTKLAVIGAGAVGST-------LAFAAAQRGI 31 (319)
T ss_dssp -CCEEEEECCSHHHHH-------HHHHHHHTTC
T ss_pred CCCEEEEECCCHHHHH-------HHHHHHhCCC
Confidence 3568999998887765 5667777777
No 203
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=21.29 E-value=1.1e+02 Score=27.91 Aligned_cols=58 Identities=22% Similarity=0.314 Sum_probs=33.6
Q ss_pred ccccCCC---hh-HHHHHHHHHhh-CCceEEEecccccc-hhHHHHHHHHHHHHHhhCCeeEecC
Q 027296 119 EFKPVPD---VD-YLQELLAIQQQ-GPRAIGFFGTRNMG-FMHQELIEILSYALVITKNHIYTSG 177 (225)
Q Consensus 119 ~~~~~p~---vD-~lqELaaiQq~-g~rrIa~lGsRhvp-~~hq~LIEllsyAlvl~gn~i~TSG 177 (225)
+++++.= +| ++++|..|+++ |+..|+++|+.... .--..++.-+.+ -++..+++.+.+
T Consensus 74 ~~~~isWdeAl~~ia~~l~~i~~~~G~~~i~~~~~~~~~~~e~~~~~~~~~~-~~~Gs~n~~~~~ 137 (715)
T 2iv2_X 74 KLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVMQKFAR-AVIGTNNVDCCA 137 (715)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHCGGGEEEECCSSTTCHHHHHHHHHHHH-HTTCCCCEECSS
T ss_pred CEEEeeHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCcCcHHHHHHHHHHH-HhcCCCcCCCCC
Confidence 4556552 66 77888888765 99999999875433 222223222222 134556776644
No 204
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=21.18 E-value=75 Score=25.94 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhh
Q 027296 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 191 (225)
.+..|.|.++.-+--..+-++|+|++..|.++||-|..
T Consensus 93 ~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~ 130 (427)
T 3fq8_A 93 LENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRA 130 (427)
T ss_dssp HHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 34455555544332234667788877777777766554
No 205
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=20.92 E-value=3.9e+02 Score=22.77 Aligned_cols=98 Identities=21% Similarity=0.247 Sum_probs=59.3
Q ss_pred hcccceeeecccccCCChh--HHHHHHH-HHhhCCceEEEeccc--ccchhHHHHHHHHHHHHHhhCC---eeEecCCCc
Q 027296 109 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKN---HIYTSGASG 180 (225)
Q Consensus 109 v~g~~~v~~~~~~~~p~vD--~lqELaa-iQq~g~rrIa~lGsR--hvp~~hq~LIEllsyAlvl~gn---~i~TSGA~G 180 (225)
.+|.-.....+|..==++| -+++|.. +-+.|-.-|.++||- -.-+.+.+-.+++..+.-..+. -|+-.|+..
T Consensus 35 ~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 114 (332)
T 2r8w_A 35 FKGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALR 114 (332)
T ss_dssp GCEEEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS
T ss_pred cCCeeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5676666677775433355 4455554 457899999999984 3445566666666666554444 334556656
Q ss_pred chHHH--HHhhhhccCCCeeEEEecCcccC
Q 027296 181 TNAAV--IRGALRAERPDLLTVILPQSLKK 208 (225)
Q Consensus 181 tNaAv--IRGalrae~p~lLTViLPQSL~r 208 (225)
|.-|+ .|-|-++ ..+-+-|+-|- ..|
T Consensus 115 t~eai~la~~A~~~-Gadavlv~~P~-Y~~ 142 (332)
T 2r8w_A 115 TDEAVALAKDAEAA-GADALLLAPVS-YTP 142 (332)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEECCCC-SSC
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCC-CCC
Confidence 65554 4445555 67777666554 444
No 206
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=20.89 E-value=32 Score=29.47 Aligned_cols=10 Identities=50% Similarity=0.966 Sum_probs=8.8
Q ss_pred eeEecCCCcc
Q 027296 172 HIYTSGASGT 181 (225)
Q Consensus 172 ~i~TSGA~Gt 181 (225)
-+||||+||.
T Consensus 160 i~~TSGTTG~ 169 (505)
T 3nyq_A 160 VVYTSGTTGP 169 (505)
T ss_dssp EEEECCSSSS
T ss_pred EEeCCCCcCC
Confidence 5899999995
No 207
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=20.88 E-value=2.3e+02 Score=23.10 Aligned_cols=59 Identities=17% Similarity=0.083 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhhCCeeEecCCCcchHHHHHhhhhccCCCeeEEEecCcccCCChhHHHHHH
Q 027296 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLA 218 (225)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~rQp~Es~elLe 218 (225)
..-+.-++.+|....+.+|+|.++ |-.+..+--+-+. .==-.+|++|... +++-+++++
T Consensus 39 ~R~a~~~l~~a~~~g~~~vv~~ss-GN~g~alA~~a~~-~G~~~~i~~p~~~---~~~k~~~~~ 97 (318)
T 2rkb_A 39 IRGIGHFCQEMAKKGCRHLVCSSG-GNAGIAAAYAARK-LGIPATIVLPEST---SLQVVQRLQ 97 (318)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHH-HTCCEEEEECTTC---CHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECC-chHHHHHHHHHHH-cCCCEEEEECCCC---cHHHHHHHH
Confidence 333444566677677788888765 4333222222222 1123688899763 445445443
No 208
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=20.87 E-value=30 Score=30.48 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=8.5
Q ss_pred eeEecCCCcc
Q 027296 172 HIYTSGASGT 181 (225)
Q Consensus 172 ~i~TSGA~Gt 181 (225)
-+||||+||.
T Consensus 189 ii~TSGSTG~ 198 (617)
T 3rg2_A 189 FQLSGGTTGT 198 (617)
T ss_dssp EEECCCSSSS
T ss_pred EEECCCcCCC
Confidence 4789999995
No 209
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=20.84 E-value=48 Score=26.43 Aligned_cols=21 Identities=14% Similarity=0.015 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHhhCCeeEec
Q 027296 156 QELIEILSYALVITKNHIYTS 176 (225)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (225)
++.++++..++...|.+|++.
T Consensus 102 ~~al~~~~~~l~~~gd~Vl~~ 122 (369)
T 3cq5_A 102 NEILQQLLQAFGGPGRTALGF 122 (369)
T ss_dssp HHHHHHHHHHHCSTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 556666666666556555554
No 210
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=20.82 E-value=2.6e+02 Score=24.01 Aligned_cols=60 Identities=22% Similarity=0.278 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhCCc-eEEEeccc---ccchhHHHHHHHHH--HHHHhhCCeeEecC-CCcchHHHHH
Q 027296 128 YLQELLAIQQQGPR-AIGFFGTR---NMGFMHQELIEILS--YALVITKNHIYTSG-ASGTNAAVIR 187 (225)
Q Consensus 128 ~lqELaaiQq~g~r-rIa~lGsR---hvp~~hq~LIElls--yAlvl~gn~i~TSG-A~GtNaAvIR 187 (225)
|..||.++++.|+. ++-+.=|| +-.+++..|-|-.. +.+...|-++|..| +.+...+|.+
T Consensus 273 y~~El~~~~~~~~~~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~~ 339 (374)
T 1ddg_A 273 YQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQ 339 (374)
T ss_dssp THHHHHHHHHTTSCCEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHHH
Confidence 67888888887764 33222244 23455444443211 12334688999999 7877665543
No 211
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=20.80 E-value=62 Score=27.73 Aligned_cols=10 Identities=50% Similarity=0.926 Sum_probs=5.8
Q ss_pred eeEecCCCcc
Q 027296 172 HIYTSGASGT 181 (225)
Q Consensus 172 ~i~TSGA~Gt 181 (225)
-+||||+||.
T Consensus 175 i~~TSGTTG~ 184 (517)
T 3r44_A 175 IMYTSGTTGH 184 (517)
T ss_dssp EEEECC---C
T ss_pred EEECCccccc
Confidence 4899999995
No 212
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=20.76 E-value=32 Score=30.85 Aligned_cols=10 Identities=30% Similarity=0.630 Sum_probs=8.7
Q ss_pred eeEecCCCcc
Q 027296 172 HIYTSGASGT 181 (225)
Q Consensus 172 ~i~TSGA~Gt 181 (225)
-|||||+||.
T Consensus 169 iiyTSGSTG~ 178 (620)
T 4dg8_A 169 INFSSGTTGR 178 (620)
T ss_dssp EEEEBSSSSS
T ss_pred EEECCCcccc
Confidence 4799999995
No 213
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=20.73 E-value=38 Score=34.35 Aligned_cols=19 Identities=32% Similarity=0.403 Sum_probs=0.0
Q ss_pred eEecCC--CcchHHHHHhhhhc
Q 027296 173 IYTSGA--SGTNAAVIRGALRA 192 (225)
Q Consensus 173 i~TSGA--~GtNaAvIRGalra 192 (225)
|+|||+ .|.||| |||+.|.
T Consensus 576 IltsGGdapGmNaa-Iravv~~ 596 (941)
T 3opy_B 576 IINVGAPAGGMNSA-VYSMATY 596 (941)
T ss_dssp EEEESSCCTTHHHH-HHHHHHH
T ss_pred EEecCCCcHHHHHH-HHHHHHH
No 214
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=20.70 E-value=76 Score=25.55 Aligned_cols=58 Identities=29% Similarity=0.296 Sum_probs=40.9
Q ss_pred eeecccccCCChhHHHHHHHHHhhCCceEEEe-ccc------------------ccchhHHH----HHHHHHHHHHhhCC
Q 027296 115 VMVSEFKPVPDVDYLQELLAIQQQGPRAIGFF-GTR------------------NMGFMHQE----LIEILSYALVITKN 171 (225)
Q Consensus 115 v~~~~~~~~p~vD~lqELaaiQq~g~rrIa~l-GsR------------------hvp~~hq~----LIEllsyAlvl~gn 171 (225)
+++..=|.+.+.+|++.|...++.|.++|+|+ |.- .|-|-||- |+|=|=||..+-.|
T Consensus 79 ~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~Gl~~~v~~rA~~~lSlS~mTfpHqL~RliL~EQlYRA~tIl~g 158 (163)
T 4fak_A 79 TLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRG 158 (163)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTBCCHHHHHHCSEEEESCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCccCHHHHHhcCceEEEecCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 44556677777889999999999999888875 321 24455653 66777777766655
Q ss_pred e
Q 027296 172 H 172 (225)
Q Consensus 172 ~ 172 (225)
|
T Consensus 159 ~ 159 (163)
T 4fak_A 159 E 159 (163)
T ss_dssp C
T ss_pred C
Confidence 4
No 215
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=20.37 E-value=32 Score=29.51 Aligned_cols=10 Identities=40% Similarity=0.471 Sum_probs=8.5
Q ss_pred eeEecCCCcc
Q 027296 172 HIYTSGASGT 181 (225)
Q Consensus 172 ~i~TSGA~Gt 181 (225)
-+||||.||.
T Consensus 172 i~~TSGTTG~ 181 (590)
T 3kxw_A 172 LQYTSGSTMH 181 (590)
T ss_dssp EEECSSCSSS
T ss_pred EEeCcCCCCC
Confidence 4799999994
No 216
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=20.27 E-value=43 Score=31.62 Aligned_cols=19 Identities=5% Similarity=0.002 Sum_probs=9.2
Q ss_pred HHHHHHHHHHhhCCeeEec
Q 027296 158 LIEILSYALVITKNHIYTS 176 (225)
Q Consensus 158 LIEllsyAlvl~gn~i~TS 176 (225)
.++++-.|++..|.+|+++
T Consensus 233 a~~~~i~al~~~GD~Vlv~ 251 (755)
T 2vyc_A 233 SNRTIMQACMTDNDVVVVD 251 (755)
T ss_dssp HHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 3444444555555555543
No 217
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=20.19 E-value=52 Score=28.26 Aligned_cols=42 Identities=12% Similarity=0.127 Sum_probs=29.9
Q ss_pred ccchhHHHHHHHHHHHHHhh-----------CCeeEecCCCcchHHHHHhhhh
Q 027296 150 NMGFMHQELIEILSYALVIT-----------KNHIYTSGASGTNAAVIRGALR 191 (225)
Q Consensus 150 hvp~~hq~LIEllsyAlvl~-----------gn~i~TSGA~GtNaAvIRGalr 191 (225)
-+.-+-+.+++.++..+-.. |.-++|||||..|..++..|..
T Consensus 115 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~ 167 (481)
T 4e1o_A 115 ACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARK 167 (481)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHH
Confidence 34456677777777776553 3459999999999888876653
Done!