BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027305
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94B74|NUDT2_ARATH Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
Length = 278
Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 138/180 (76%), Gaps = 4/180 (2%)
Query: 1 MSASVNS----SSATVNKFLNGINDNYGGVVVQMNEPMDPQLFASLLKSSISHWRQQAKK 56
MSAS +S S L + D YGGV+ +M PMDP LF++LL+SS+S W Q KK
Sbjct: 1 MSASSSSTNPMSREDATTLLPSVQDKYGGVMTEMTHPMDPSLFSTLLRSSLSTWTLQGKK 60
Query: 57 GVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVM 116
GVWIKLP +L L E AVKEGFWFHHAE +YLMLVYWIP +TLPANASHRVG+GAFV+
Sbjct: 61 GVWIKLPKQLIGLAETAVKEGFWFHHAEKDYLMLVYWIPKEDDTLPANASHRVGIGAFVI 120
Query: 117 NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176
N +EVLVVQE +GRF+G GIWKFPTGVV+EGEDI +VREVKEET +DTEF ++LAFR
Sbjct: 121 NHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVREVKEETGVDTEFDQILAFR 180
>sp|Q9SU14|NUDT7_ARATH Nudix hydrolase 7 OS=Arabidopsis thaliana GN=NUDT7 PE=1 SV=1
Length = 282
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 120/163 (73%), Gaps = 1/163 (0%)
Query: 15 FLNGINDNYGGVVVQMNEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAV 74
L G DNY GV V M EPMD ++F L++S+SHWR++ KKG+WIKLP+ LANLVE AV
Sbjct: 10 LLEGETDNYDGVTVTMVEPMDSEVFTESLRASLSHWREEGKKGIWIKLPLGLANLVEAAV 69
Query: 75 KEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENSGRFR 133
EGF +HHAEP YLMLV WI +T+PANASH VG GA V+N +EVLVVQE SG F+
Sbjct: 70 SEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQERSGFFK 129
Query: 134 GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176
+WK PTGV++EGEDI REV+EET I +FVEVLAFR
Sbjct: 130 DKNVWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLAFR 172
>sp|Q6NPD7|NUD10_ARATH Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT10 PE=1 SV=1
Length = 277
Score = 207 bits (527), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 117/157 (74%), Gaps = 5/157 (3%)
Query: 19 INDNYGGVVVQMNEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGF 78
++D+YGGV+V+M PMD + F + L+ S WR Q KKGVW+ LP+ NLVEPAVKEGF
Sbjct: 23 VDDDYGGVIVEMKTPMDTKNFVAALRDSFEQWRLQGKKGVWLNLPLSHVNLVEPAVKEGF 82
Query: 79 WFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIW 138
+HHAEP YLMLVYWIP +T+P NASHRV VGA V+N +E E G G+GIW
Sbjct: 83 RYHHAEPTYLMLVYWIPEAESTIPLNASHRVRVGAVVLNHNKE-----EKYGSLCGSGIW 137
Query: 139 KFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAF 175
K PTGVVDEGE+I AA+REVKEET IDTEF+E+LAF
Sbjct: 138 KIPTGVVDEGEEIFAAAIREVKEETGIDTEFLEILAF 174
>sp|Q8L7W2|NUDT8_ARATH Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2
Length = 369
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
Query: 2 SASVNSSSATVNKFLNGINDNYGGVVVQMNE-PMDPQLFASLLKSSISHWRQQAKKGVWI 60
S ++ SS+ L+ +D YGGV+V + P +P FAS+L++S+S WR++ KKGVW+
Sbjct: 82 SRTLMSSAVKERSLLDAYDDEYGGVIVDHGKLPSNPYAFASMLRASLSDWRRKGKKGVWL 141
Query: 61 KLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIP-GGANTLPANASHRVGVGAFVMNGK 119
KLP+E + LV A+KEGF +HHAE Y+ML YWIP + LPANASH+VGVG FV+N
Sbjct: 142 KLPVEQSELVPIAIKEGFEYHHAEKGYVMLTYWIPEEEPSMLPANASHQVGVGGFVLNQH 201
Query: 120 REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYV 178
+EVLVVQE TG+WK PTG ++E E+I AVREVKEET +DTEF EV+AFR+
Sbjct: 202 KEVLVVQEKYCAPSITGLWKLPTGFINESEEIFSGAVREVKEETGVDTEFSEVIAFRHA 260
>sp|Q9SJC4|NUDT6_ARATH Nudix hydrolase 6 OS=Arabidopsis thaliana GN=NUDT6 PE=1 SV=1
Length = 283
Score = 194 bits (493), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 126/190 (66%), Gaps = 5/190 (2%)
Query: 15 FLNGINDNYGGVVVQMNEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAV 74
L G+ DNYGGV V + EPM + F L++S+ +W Q KG+W+KL L NL+ PA
Sbjct: 10 LLQGVPDNYGGVKVNLTEPMTIEDFVPKLRASLVYWSNQGTKGIWLKLADGLDNLIAPAK 69
Query: 75 KEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMNGK-REVLVVQENSGRFR 133
EGF HHAE Y ML WI +TLPANASHR+GVGAFV+N K +EVLVVQE G F+
Sbjct: 70 AEGFVCHHAEREYTMLTSWIADVPSTLPANASHRIGVGAFVLNKKTKEVLVVQEIDGHFK 129
Query: 134 GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVESKPLL 193
GTG+WK PTGVV EGE+I A+REV+EET I T+FVEVLAFR ++E K +
Sbjct: 130 GTGVWKLPTGVVKEGENIWEGALREVEEETGIKTKFVEVLAFRE----SHQAFLEIKTDI 185
Query: 194 FIIFQFEVYT 203
F + + E T
Sbjct: 186 FFLCELEPTT 195
>sp|Q9SJC6|NUDT5_ARATH Nudix hydrolase 5 OS=Arabidopsis thaliana GN=NUDT5 PE=2 SV=3
Length = 302
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 115/163 (70%), Gaps = 2/163 (1%)
Query: 15 FLNGINDNYGGVVVQMNE--PMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEP 72
L+G D +GG VV + E M F S L S+ W+ Q KKG+WIKLP EL++LV+
Sbjct: 29 LLDGEEDRFGGTVVNLMEVESMTIGDFDSKLDVSLKAWKDQGKKGIWIKLPSELSSLVDT 88
Query: 73 AVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRF 132
A+K+GF +HHAE Y+ML +W+P +TLP NASHR+G+GAFV+N E+LVVQENSG F
Sbjct: 89 AIKKGFTYHHAENEYVMLTFWLPEPPSTLPCNASHRIGIGAFVLNKNGEMLVVQENSGYF 148
Query: 133 RGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAF 175
+ +WK PTG + EGE I AVREVKEET ID EFVEVL+F
Sbjct: 149 KDKNVWKVPTGTIKEGESIWAGAVREVKEETDIDAEFVEVLSF 191
>sp|P70563|NUDT6_RAT Nucleoside diphosphate-linked moiety X motif 6 OS=Rattus norvegicus
GN=Nudt6 PE=1 SV=1
Length = 313
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 9/167 (5%)
Query: 16 LNGINDNYGGVVVQMNE-----PMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLV 70
L G D +GG+ V ++ +D F LL+++I WR + + W+ +PI ++ +
Sbjct: 43 LQGELDRFGGISVHLSRHRTLHRLDAAAFRRLLQAAIQQWRAEGRIAAWLHIPILQSHFI 102
Query: 71 EPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENS 129
PA GF FHHAEP+ L W+ G + LP A+H+VGV V + R+VLVVQ+
Sbjct: 103 APAASLGFCFHHAEPHLSTLTLWLGEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQD-- 160
Query: 130 GRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176
R + +WKFP G+ + GEDI AVREV EET + +EF +L+ R
Sbjct: 161 -RNKLKNMWKFPGGLSEPGEDIGDTAVREVFEETGVKSEFRSLLSIR 206
>sp|Q8CH40|NUDT6_MOUSE Nucleoside diphosphate-linked moiety X motif 6 OS=Mus musculus
GN=Nudt6 PE=2 SV=1
Length = 313
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 9/167 (5%)
Query: 16 LNGINDNYGGVVVQMNEP-----MDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLV 70
L G D +GGV V ++ +D F LL+++I WR + W+ +PI ++ +
Sbjct: 43 LQGELDRFGGVSVHLSRHHTLHGLDAAAFRRLLQAAIQQWRSDGRIAAWLHIPILQSHFI 102
Query: 71 EPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENS 129
PA GF FHHA+P+ L W+ G + LP A+H+VGV V + R+VLVVQ+
Sbjct: 103 APAASLGFCFHHAKPHSSTLTLWLGEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQD-- 160
Query: 130 GRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176
R + +WKFP G+ + GEDI AVREV EET + +EF +L+ R
Sbjct: 161 -RNKLKNMWKFPGGLSEPGEDIADTAVREVFEETGVKSEFRSLLSIR 206
>sp|P53370|NUDT6_HUMAN Nucleoside diphosphate-linked moiety X motif 6 OS=Homo sapiens
GN=NUDT6 PE=1 SV=2
Length = 316
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 9/167 (5%)
Query: 16 LNGINDNYGGVVVQMN-----EPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLV 70
L G D +GG+ V++ + +D F L++++ WR + + VW+ +PI + +
Sbjct: 46 LQGELDRFGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFI 105
Query: 71 EPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGV-GAFVMNGKREVLVVQENS 129
PA GF FHHAE + L W+ G + LP ASH+VGV GA R++LVVQ+
Sbjct: 106 APAASLGFCFHHAESDSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQD-- 163
Query: 130 GRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176
R + +WKFP G+ + EDI AVREV EET I +EF VL+ R
Sbjct: 164 -RNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIR 209
>sp|P13420|NUDT6_XENLA Nucleoside diphosphate-linked moiety X motif 6 OS=Xenopus laevis
GN=nudt6 PE=1 SV=1
Length = 217
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 77/140 (55%), Gaps = 15/140 (10%)
Query: 67 ANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPANASHRVGVGAFVM---NGKREVL 123
+ L+ A EGF FHHAE N L W+ G + LP A+H+VGV V+ NGK VL
Sbjct: 3 SRLISIAASEGFTFHHAERNESTLTLWLKDGPSKLPGYATHQVGVAGAVLDEDNGK--VL 60
Query: 124 VVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYV----- 178
VVQ+ R + WKFP G+ D+GEDI AVREV EET I +EF +L+ R
Sbjct: 61 VVQD---RNKTVNAWKFPGGLSDQGEDIGATAVREVLEETGIHSEFKSLLSIRQQHNHPG 117
Query: 179 IFLKRIFYV--ESKPLLFII 196
F K Y+ KPL + I
Sbjct: 118 AFGKSDLYIICRLKPLSYTI 137
>sp|Q16BL5|RPPH_ROSDO RNA pyrophosphohydrolase OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=rppH PE=3 SV=1
Length = 160
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 103 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEE 162
A +R VG +MNG+ EV V Q R W+ P G V++GED AA+RE+ EE
Sbjct: 7 ARLPYRPCVGVMLMNGQGEVFVGQR---RDNNVAAWQMPQGGVEKGEDPRAAALRELWEE 63
Query: 163 TSIDTEFVEVLA 174
T ++ E EV+A
Sbjct: 64 TGVNPELAEVVA 75
>sp|Q568Q0|NUD18_DANRE 8-oxo-dGDP phosphatase NUDT18 OS=Danio rerio GN=nudt18 PE=2 SV=1
Length = 325
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 111 VGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFV 170
VGA + N K EVL+VQE + G W P G ++E E I A REV+EE ID + +
Sbjct: 43 VGAVIFNSKEEVLMVQE--AKRECYGRWYLPAGRMEECESILEALQREVREEAGIDCQPI 100
Query: 171 EVL 173
+L
Sbjct: 101 TLL 103
>sp|Q57B54|RPPH_BRUAB RNA pyrophosphohydrolase OS=Brucella abortus biovar 1 (strain
9-941) GN=rppH PE=3 SV=1
Length = 178
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|Q2YLJ4|RPPH_BRUA2 RNA pyrophosphohydrolase OS=Brucella abortus (strain 2308) GN=rppH
PE=3 SV=2
Length = 178
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|B2S7Z7|RPPH_BRUA1 RNA pyrophosphohydrolase OS=Brucella abortus (strain S19) GN=rppH
PE=3 SV=1
Length = 178
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|Q5LMH8|RPPH_RUEPO RNA pyrophosphohydrolase OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=rppH PE=3 SV=1
Length = 161
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 103 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEE 162
A +R VG +MNG V V Q + T W+ P G VDE ED AA+RE+ EE
Sbjct: 7 AALPYRPCVGVVLMNGDGFVFVGQRMD---QNTDAWQMPQGGVDEDEDPFEAALRELWEE 63
Query: 163 TSIDTEFVEVLA 174
T + + VE++A
Sbjct: 64 TGVTADLVEMVA 75
>sp|Q8FYM9|RPPH_BRUSU RNA pyrophosphohydrolase OS=Brucella suis biovar 1 (strain 1330)
GN=rppH PE=3 SV=2
Length = 178
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|A9WWW1|RPPH_BRUSI RNA pyrophosphohydrolase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=rppH PE=3 SV=1
Length = 178
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|A5VSH6|RPPH_BRUO2 RNA pyrophosphohydrolase OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rppH PE=3 SV=1
Length = 178
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|A9M874|RPPH_BRUC2 RNA pyrophosphohydrolase OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rppH PE=3 SV=1
Length = 178
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|Q9CAF2|NUD26_ARATH Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26
PE=1 SV=1
Length = 216
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSID 166
+R VG +MN +++ + R W+ P G +DEGED VA +RE+KEET +
Sbjct: 63 YRRNVGVCLMNSSKKIFT----ASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVH 118
Query: 167 TEFVEVLA 174
+ E+LA
Sbjct: 119 S--AEILA 124
>sp|Q8YJ71|RPPH_BRUME RNA pyrophosphohydrolase OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rppH PE=3 SV=1
Length = 178
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|C0RF85|RPPH_BRUMB RNA pyrophosphohydrolase OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rppH PE=3 SV=1
Length = 178
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 95 PGGANTLPANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
P GA P + +R VG V+N G+R V+ E G T +W+ P G +D+
Sbjct: 7 PTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDK 63
Query: 148 GEDICVAAVREVKEETSIDT 167
GED AA+RE+ EET + +
Sbjct: 64 GEDPAQAALRELYEETGMTS 83
>sp|Q4FP40|RPPH_PELUB RNA pyrophosphohydrolase OS=Pelagibacter ubique (strain HTCC1062)
GN=rppH PE=3 SV=1
Length = 158
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 104 NASHRVGVGAFVMNGKREVLVVQ--ENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKE 161
N R GVG V+N +V V + +N F W+ P G VD+GED AA RE++E
Sbjct: 7 NLPLRNGVGIVVLNKDNKVFVAKRIDNQKNF-----WQMPQGGVDKGEDYLTAAYRELEE 61
Query: 162 ETSI 165
ETSI
Sbjct: 62 ETSI 65
>sp|Q641Y7|NUD18_RAT 8-oxo-dGDP phosphatase NUDT18 OS=Rattus norvegicus GN=Nudt18 PE=2
SV=2
Length = 323
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 95 PGGANTLPANASHRVG--VGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDIC 152
P G LP V V A +N + EVL++QE RGT W P G ++ GE I
Sbjct: 28 PAGKPLLPVRLRKNVCYVVLAVFLNEQDEVLMIQEAKRECRGT--WYLPAGRMEPGETIV 85
Query: 153 VAAVREVKEETSIDTEFVEVLA 174
A REVKEE + E V +L+
Sbjct: 86 EAMQREVKEEAGLLCEPVTLLS 107
>sp|O45830|NDX1_CAEEL Putative nudix hydrolase 1 OS=Caenorhabditis elegans GN=ndx-1 PE=3
SV=1
Length = 365
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 121 EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176
EVL++QE RG W P G V+ GE I A VREVKEET + VE+L+ +
Sbjct: 89 EVLLIQEAKKSCRGK--WYMPAGRVEAGETIEEAVVREVKEETGYSCDVVELLSLQ 142
>sp|B8CQL0|RPPH_SHEPW RNA pyrophosphohydrolase OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=rppH PE=3 SV=1
Length = 173
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G VDEGE A RE+ EE +
Sbjct: 8 RANVGIIICNRSGQVMWAR----RF-GQHSWQFPQGGVDEGESAEEAMYRELYEEVGLRP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V++LA RY + KR+ +SKP+
Sbjct: 63 EHVQILASTRSWLRYRL-PKRLIRQDSKPV 91
>sp|Q3U2V3|NUD18_MOUSE 8-oxo-dGDP phosphatase NUDT18 OS=Mus musculus GN=Nudt18 PE=2 SV=1
Length = 323
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 95 PGGANTLPANASHRVG--VGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDIC 152
P G P V V A +N + EVL++QE RGT W P G ++ GE I
Sbjct: 28 PAGKPLFPVRLRKNVCYVVLAVFLNEQDEVLMIQEAKRECRGT--WYLPAGRMEPGETIV 85
Query: 153 VAAVREVKEETSIDTEFVEVLA 174
A REVKEE + E V +L+
Sbjct: 86 EAMQREVKEEAGLLCEPVTLLS 107
>sp|A3QBR1|RPPH_SHELP RNA pyrophosphohydrolase OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=rppH PE=3 SV=1
Length = 174
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G VDEGE A RE+ EE +
Sbjct: 8 RANVGIIICNRFGQVMWAR----RF-GQHSWQFPQGGVDEGESAEQAMYRELYEEVGLRP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V+VL RY + KR+ +SKPL
Sbjct: 63 EHVQVLTSTRSWLRYRL-PKRLIRQDSKPL 91
>sp|P46351|YTH1_PANTH Uncharacterized 45.4 kDa protein in thiaminase I 5'region
OS=Paenibacillus thiaminolyticus PE=4 SV=1
Length = 413
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 88 LMLVYWIPGGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDE 147
L + WIP P + GV VM+ + VL+++ G W P+G V+
Sbjct: 258 LRIERWIP---PAFPWPDDIKPGVAGIVMDERGRVLLMKRAD-----NGCWGLPSGHVER 309
Query: 148 GEDICVAAVREVKEETSIDTEFVEVLAF 175
GE + A VRE++EET + E + ++
Sbjct: 310 GESVEEAIVREIREETGLQVEVMRLVGL 337
>sp|A8LKJ8|RPPH_DINSH RNA pyrophosphohydrolase OS=Dinoroseobacter shibae (strain DFL 12)
GN=rppH PE=3 SV=1
Length = 160
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 103 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEE 162
A +R VG + +G V Q W+ P G +++GED AA+RE+ EE
Sbjct: 7 AALPYRKCVGVVLWDGAGRVFTGQRYDSELPA---WQMPQGGIEDGEDARTAALRELVEE 63
Query: 163 TSIDTEFVEVLA 174
T + E VEVLA
Sbjct: 64 TGVAVEKVEVLA 75
>sp|Q07YY0|RPPH_SHEFN RNA pyrophosphohydrolase OS=Shewanella frigidimarina (strain NCIMB
400) GN=rppH PE=3 SV=1
Length = 172
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G +D+GE + A RE+ EE +
Sbjct: 8 RANVGIIICNKFGQVMWAR----RF-GQHSWQFPQGGLDDGESVEEAMYRELYEEVGLRP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V++L RY + KR+ ESKP+
Sbjct: 63 EHVQILTSTRSWLRYRL-PKRLVRQESKPV 91
>sp|Q89X78|RPPH_BRAJA RNA pyrophosphohydrolase OS=Bradyrhizobium japonicum (strain USDA
110) GN=rppH PE=3 SV=1
Length = 167
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 104 NASHRVGVGAFVMNGKREVLVVQENSG--RFRGTGIWKFPTGVVDEGEDICVAAVREVKE 161
+ +R VG ++N K V + + G T +W+ P G VD GED AA RE+ E
Sbjct: 6 DLPYRTCVGVMLINAKGLVFIGRRAGGIEHIDDTHVWQMPQGGVDPGEDTWAAAKRELYE 65
Query: 162 ETSIDT 167
ETS+ +
Sbjct: 66 ETSVRS 71
>sp|Q2N9Y3|RPPH_ERYLH RNA pyrophosphohydrolase OS=Erythrobacter litoralis (strain
HTCC2594) GN=rppH PE=3 SV=1
Length = 164
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 113 AFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEV 172
A VM RE LV + G W+ P G +D GE AA+RE++EET + + +V
Sbjct: 17 AGVMLANREGLVFAAQRIDSKNLGAWQMPQGGIDPGETQQEAAMRELEEETGVSADLADV 76
Query: 173 LA 174
+A
Sbjct: 77 IA 78
>sp|P0C997|DIPP_ASFWA mRNA-decapping protein g5R OS=African swine fever virus (isolate
Warthog/Namibia/Wart80/1980) GN=War-112 PE=3 SV=1
Length = 246
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 117 NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL 173
NGK+ + ++ + G GT +W+ P G E E A+RE +EET I E+ ++L
Sbjct: 104 NGKKLISLINQAKGS--GTLLWEIPKGKPKEDESDLTCAIREFEEETGITREYYQIL 158
>sp|A6VMA3|RPPH_ACTSZ RNA pyrophosphohydrolase OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=rppH PE=3 SV=1
Length = 197
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSID 166
+R VG + N K +VL + G W+FP G ++EGE A RE+ EE +
Sbjct: 7 YRPNVGIVICNRKGQVLWAKRY-----GQNSWQFPQGGINEGETPEQAMFRELFEEVGLQ 61
Query: 167 TEFVEVLA-----FRYVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQR 217
+ V VL RY + KR+ +SKP+ Q L VCH + M R
Sbjct: 62 KKDVRVLYASKLWLRYKL-PKRLLRHDSKPMCIGQKQRWFLLQL-VCHEKEIDMHR 115
>sp|P32092|DIPP_ASFB7 mRNA-decapping protein g5R OS=African swine fever virus (strain
Badajoz 1971 Vero-adapted) GN=Ba71V-102 PE=1 SV=1
Length = 250
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 117 NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL 173
NGK+ + ++ + G GT +W+ P G E E A+RE +EET I E+ ++L
Sbjct: 108 NGKKLISLINQAKGS--GTLLWEIPKGKPKEDESDLTCAIREFEEETGITREYYQIL 162
>sp|P0C996|DIPP_ASFP4 mRNA-decapping protein g5R OS=African swine fever virus (isolate
Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-114
PE=3 SV=1
Length = 250
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 117 NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL 173
NGK+ + ++ + G GT +W+ P G E E A+RE +EET I E+ ++L
Sbjct: 108 NGKKLISLINQAKGS--GTLLWEIPKGKPKEDESDLTCAIREFEEETGITREYYQIL 162
>sp|Q2G7H8|RPPH_NOVAD RNA pyrophosphohydrolase OS=Novosphingobium aromaticivorans (strain
DSM 12444) GN=rppH PE=3 SV=1
Length = 161
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 103 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGI-WKFPTGVVDEGEDICVAAVREVKE 161
A +R VG ++N + V V + + G+ W+ P G +D+GE++ AA+RE+ E
Sbjct: 6 AGLPYRPCVGVMLVNSQGRVFVGRRIDDK---DGVAWQMPQGGIDDGEELHPAALRELSE 62
Query: 162 ETSIDTEFVEVLA 174
ET + E V ++A
Sbjct: 63 ETGVAAELVTIIA 75
>sp|A6WXT0|RPPH_OCHA4 RNA pyrophosphohydrolase OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=rppH PE=3 SV=1
Length = 174
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 102 PANASHRVGVGAFVMN-------GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVA 154
P + +R VG V+N G+R V+ E G T +W+ P G +D+GE+ A
Sbjct: 10 PESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDG---ATQLWQMPQGGIDKGEEPLEA 66
Query: 155 AVREVKEETSIDT 167
A+RE+ EET + +
Sbjct: 67 AIRELYEETGMKS 79
>sp|Q1GSV9|RPPH_SPHAL RNA pyrophosphohydrolase OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=rppH PE=3 SV=1
Length = 158
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 138 WKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLA 174
W+ P G +DEGED AA+RE+ EET I V+++A
Sbjct: 37 WQMPQGGIDEGEDAEKAAIRELGEETGIHGGLVDIIA 73
>sp|Q9A2W6|RPPH_CAUCR RNA pyrophosphohydrolase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=rppH PE=3 SV=1
Length = 172
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 138 WKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLA 174
W+FP G VDEGED+ VAA RE+ EET + + VE+L
Sbjct: 38 WQFPQGGVDEGEDLEVAARRELAEETGVTS--VELLG 72
>sp|B8H5H3|RPPH_CAUCN RNA pyrophosphohydrolase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=rppH PE=3 SV=1
Length = 172
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 138 WKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLA 174
W+FP G VDEGED+ VAA RE+ EET + + VE+L
Sbjct: 38 WQFPQGGVDEGEDLEVAARRELAEETGVTS--VELLG 72
>sp|P61786|RPPH_RHOPA RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=rppH PE=3 SV=1
Length = 168
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 104 NASHRVGVGAFVMNGKREVLVVQENSG--RFRGTGIWKFPTGVVDEGEDICVAAVREVKE 161
+ +R VG ++N + V + + G T +W+ P G VD GED AA RE+ E
Sbjct: 6 DLPYRTCVGVMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWKAAKRELYE 65
Query: 162 ETSIDTEFVEVLA 174
ETS+++ VE LA
Sbjct: 66 ETSVNS--VEKLA 76
>sp|Q07V02|RPPH_RHOP5 RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
BisA53) GN=rppH PE=3 SV=1
Length = 176
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 104 NASHRVGVGAFVMNGKREVLVVQENSG--RFRGTGIWKFPTGVVDEGEDICVAAVREVKE 161
+ +R VG ++N + V + + + G + +W+ P G VD GED AA RE+ E
Sbjct: 6 DLPYRTCVGMMLLNAEGLVFIGRRSGGIEHVDDSHVWQMPQGGVDPGEDTWAAAKRELYE 65
Query: 162 ETSIDT 167
ETS+ +
Sbjct: 66 ETSVQS 71
>sp|B0TIU1|RPPH_SHEHH RNA pyrophosphohydrolase OS=Shewanella halifaxensis (strain
HAW-EB4) GN=rppH PE=3 SV=1
Length = 173
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G VD+GE A RE+ EE +
Sbjct: 8 RANVGIIICNRFGQVMWAR----RF-GQHSWQFPQGGVDDGESAEEAMYRELYEEVGLKP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V++L RY + KR+ +SKP+
Sbjct: 63 EHVQILTSTRSWLRYRL-PKRLIRQDSKPV 91
>sp|A8FSC0|RPPH_SHESH RNA pyrophosphohydrolase OS=Shewanella sediminis (strain HAW-EB3)
GN=rppH PE=3 SV=1
Length = 172
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G VDEGE A RE+ EE +
Sbjct: 8 RANVGIIICNRFGQVMWAR----RF-GQHSWQFPQGGVDEGETPEEAMFRELYEEVGLRP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V++L RY + KR+ +SKP+
Sbjct: 63 EHVQILTSTRSWLRYRL-PKRLIRQDSKPV 91
>sp|A8H1B1|RPPH_SHEPA RNA pyrophosphohydrolase OS=Shewanella pealeana (strain ATCC 700345
/ ANG-SQ1) GN=rppH PE=3 SV=1
Length = 173
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G VD+GE A RE+ EE +
Sbjct: 8 RANVGIIICNRFGQVMWAR----RF-GQHSWQFPQGGVDDGESAEEAMYRELYEEVGLKP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V++L RY + KR+ +SKP+
Sbjct: 63 EHVQILTSTRSWLRYRL-PKRLIRQDSKPV 91
>sp|A1RME4|RPPH_SHESW RNA pyrophosphohydrolase OS=Shewanella sp. (strain W3-18-1) GN=rppH
PE=3 SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G VD+GE A RE+ EE +
Sbjct: 8 RANVGIIICNRYGQVMWAR----RF-GQHSWQFPQGGVDDGESAEEAMYRELYEEVGLRP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V +L RY + KR+ +SKP+
Sbjct: 63 EHVHILTSTRSWLRYRL-PKRLVRQDSKPV 91
>sp|A4Y4I7|RPPH_SHEPC RNA pyrophosphohydrolase OS=Shewanella putrefaciens (strain CN-32 /
ATCC BAA-453) GN=rppH PE=3 SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167
R VG + N +V+ + RF G W+FP G VD+GE A RE+ EE +
Sbjct: 8 RANVGIIICNRYGQVMWAR----RF-GQHSWQFPQGGVDDGESAEEAMYRELYEEVGLRP 62
Query: 168 EFVEVLA-----FRYVIFLKRIFYVESKPL 192
E V +L RY + KR+ +SKP+
Sbjct: 63 EHVHILTSTRSWLRYRL-PKRLVRQDSKPV 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,285,414
Number of Sequences: 539616
Number of extensions: 3441549
Number of successful extensions: 8084
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 7775
Number of HSP's gapped (non-prelim): 387
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)