Query 027305
Match_columns 225
No_of_seqs 292 out of 2137
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 12:58:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027305.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027305hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fxt_A Nucleoside diphosphate- 99.9 7.7E-25 2.6E-29 163.2 9.6 87 13-99 22-113 (113)
2 4dyw_A MUTT/nudix family prote 99.8 6E-19 2E-23 138.9 14.8 120 97-224 18-137 (157)
3 3i7u_A AP4A hydrolase; nudix p 99.8 6.1E-19 2.1E-23 135.9 13.1 103 108-222 4-106 (134)
4 3grn_A MUTT related protein; s 99.8 6.8E-18 2.3E-22 131.7 15.5 109 106-223 6-114 (153)
5 3hhj_A Mutator MUTT protein; n 99.8 8.3E-18 2.8E-22 131.9 12.6 118 97-223 18-135 (158)
6 1sjy_A MUTT/nudix family prote 99.8 1.8E-17 6.1E-22 129.5 14.3 111 106-223 11-125 (159)
7 3r03_A Nudix hydrolase; struct 99.8 1.4E-17 4.9E-22 128.0 13.1 108 107-223 7-114 (144)
8 3gg6_A Nudix motif 18, nucleos 99.8 1.4E-17 4.8E-22 130.2 13.2 107 106-224 18-126 (156)
9 3u53_A BIS(5'-nucleosyl)-tetra 99.7 2.5E-17 8.5E-22 129.1 14.5 106 110-222 5-119 (155)
10 3gwy_A Putative CTP pyrophosph 99.7 1.5E-17 5.2E-22 127.9 12.3 103 108-222 6-110 (140)
11 3oga_A Nucleoside triphosphata 99.7 4.5E-17 1.5E-21 128.6 14.4 117 106-224 25-145 (165)
12 3ees_A Probable pyrophosphohyd 99.7 3.3E-17 1.1E-21 126.9 13.3 105 108-223 21-125 (153)
13 2pbt_A AP4A hydrolase; nudix p 99.7 1.7E-17 5.9E-22 125.9 11.3 104 108-223 4-107 (134)
14 1rya_A GDP-mannose mannosyl hy 99.7 6E-18 2.1E-22 132.4 8.9 114 107-223 17-133 (160)
15 3shd_A Phosphatase NUDJ; nudix 99.7 2.4E-17 8.3E-22 128.3 11.7 106 108-223 5-110 (153)
16 1vcd_A NDX1; nudix protein, di 99.7 3.4E-17 1.2E-21 123.1 12.2 100 109-223 3-102 (126)
17 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 6.3E-17 2.2E-21 124.1 13.7 109 104-224 5-117 (139)
18 3q93_A 7,8-dihydro-8-oxoguanin 99.7 5.4E-17 1.9E-21 130.3 13.7 104 110-223 26-129 (176)
19 1ktg_A Diadenosine tetraphosph 99.7 9.8E-17 3.4E-21 122.4 14.3 108 108-223 3-113 (138)
20 1nqz_A COA pyrophosphatase (MU 99.7 1.9E-17 6.6E-22 134.4 10.7 114 103-223 29-145 (194)
21 3exq_A Nudix family hydrolase; 99.7 3.5E-17 1.2E-21 129.2 11.5 109 106-224 8-117 (161)
22 2w4e_A MUTT/nudix family prote 99.7 8.4E-18 2.9E-22 130.6 7.7 108 108-223 5-112 (145)
23 2b0v_A Nudix hydrolase; struct 99.7 4.2E-17 1.4E-21 126.6 11.7 108 108-223 8-115 (153)
24 3f6a_A Hydrolase, nudix family 99.7 4.5E-17 1.5E-21 127.9 11.8 110 108-224 6-129 (159)
25 3id9_A MUTT/nudix family prote 99.7 9.5E-17 3.2E-21 127.4 13.2 106 107-224 22-131 (171)
26 3eds_A MUTT/nudix family prote 99.7 2.8E-17 9.7E-22 128.5 9.7 110 106-224 19-131 (153)
27 3cng_A Nudix hydrolase; struct 99.7 2.6E-16 9E-21 127.5 15.3 106 105-224 37-142 (189)
28 2rrk_A ORF135, CTP pyrophospho 99.7 1.1E-16 3.9E-21 122.2 12.3 101 111-222 11-111 (140)
29 3q1p_A Phosphohydrolase (MUTT/ 99.7 6.2E-17 2.1E-21 133.2 11.5 110 104-223 64-173 (205)
30 3son_A Hypothetical nudix hydr 99.7 1.6E-16 5.4E-21 123.3 12.9 108 109-223 6-119 (149)
31 3h95_A Nucleoside diphosphate- 99.7 6.3E-17 2.1E-21 132.3 11.0 119 98-224 16-136 (199)
32 2fkb_A Putative nudix hydrolas 99.7 3.2E-16 1.1E-20 125.3 13.8 107 108-223 37-144 (180)
33 2fb1_A Conserved hypothetical 99.7 9.6E-17 3.3E-21 134.2 10.9 116 100-223 5-123 (226)
34 1v8y_A ADP-ribose pyrophosphat 99.7 5.8E-17 2E-21 128.9 8.9 106 108-223 34-139 (170)
35 2pqv_A MUTT/nudix family prote 99.7 5.1E-16 1.8E-20 121.0 14.1 107 107-224 18-125 (154)
36 2azw_A MUTT/nudix family prote 99.7 2.1E-16 7.2E-21 121.8 11.4 109 106-223 16-125 (148)
37 1vhz_A ADP compounds hydrolase 99.7 1.7E-16 6E-21 129.9 11.2 107 109-224 50-156 (198)
38 2o1c_A DATP pyrophosphohydrola 99.7 5.5E-16 1.9E-20 119.4 12.8 110 108-223 9-127 (150)
39 3fk9_A Mutator MUTT protein; s 99.7 4E-16 1.4E-20 126.6 12.3 103 110-222 6-108 (188)
40 2yvp_A NDX2, MUTT/nudix family 99.7 5.9E-17 2E-21 130.1 6.9 108 107-223 40-149 (182)
41 3o8s_A Nudix hydrolase, ADP-ri 99.7 2.8E-16 9.6E-21 129.3 10.8 110 104-224 66-175 (206)
42 1mut_A MUTT, nucleoside tripho 99.7 3E-17 1E-21 123.6 3.9 101 112-223 8-108 (129)
43 1mk1_A ADPR pyrophosphatase; n 99.7 1.1E-16 3.7E-21 131.8 7.4 107 108-223 43-153 (207)
44 2b06_A MUTT/nudix family prote 99.7 3.6E-16 1.2E-20 121.9 9.8 105 106-223 6-114 (155)
45 3f13_A Putative nudix hydrolas 99.7 6.4E-16 2.2E-20 122.9 11.2 94 108-219 15-108 (163)
46 3fcm_A Hydrolase, nudix family 99.7 3.5E-15 1.2E-19 121.6 15.5 114 106-224 43-163 (197)
47 1hzt_A Isopentenyl diphosphate 99.7 4.7E-16 1.6E-20 125.8 10.3 111 109-223 33-145 (190)
48 2kdv_A RNA pyrophosphohydrolas 99.6 2.7E-15 9.1E-20 119.0 14.1 112 106-222 6-129 (164)
49 1vk6_A NADH pyrophosphatase; 1 99.6 1.6E-15 5.5E-20 130.1 13.6 112 99-224 131-242 (269)
50 1q27_A Putative nudix hydrolas 99.6 7.8E-16 2.7E-20 122.1 9.2 109 108-223 34-143 (171)
51 1g0s_A Hypothetical 23.7 kDa p 99.6 1.7E-15 5.9E-20 125.0 11.1 110 108-224 57-175 (209)
52 1x51_A A/G-specific adenine DN 99.6 1.3E-15 4.4E-20 119.1 9.3 95 107-209 18-117 (155)
53 2qjt_B Nicotinamide-nucleotide 99.6 3.1E-15 1.1E-19 131.7 11.7 118 101-222 201-322 (352)
54 2a6t_A SPAC19A8.12; alpha/beta 99.6 4.8E-17 1.6E-21 139.8 0.0 130 79-224 73-208 (271)
55 3gz5_A MUTT/nudix family prote 99.6 1.6E-15 5.6E-20 127.9 9.2 111 104-222 18-133 (240)
56 2qjo_A Bifunctional NMN adenyl 99.6 1.9E-15 6.4E-20 132.4 9.8 116 104-223 199-317 (341)
57 3q91_A Uridine diphosphate glu 99.6 3.3E-15 1.1E-19 124.5 10.6 123 95-224 23-184 (218)
58 2fml_A MUTT/nudix family prote 99.6 1.4E-14 4.8E-19 124.3 14.7 117 100-223 31-152 (273)
59 3i9x_A MUTT/nudix family prote 99.6 1.2E-15 4.2E-20 123.2 7.5 109 109-222 28-149 (187)
60 1f3y_A Diadenosine 5',5'''-P1, 99.6 1.6E-15 5.6E-20 118.7 7.4 59 106-168 12-70 (165)
61 3o6z_A GDP-mannose pyrophospha 99.6 4.9E-15 1.7E-19 120.5 9.5 107 109-224 46-162 (191)
62 2fvv_A Diphosphoinositol polyp 99.6 7.6E-15 2.6E-19 119.9 10.3 67 107-177 39-107 (194)
63 2jvb_A Protein PSU1, mRNA-deca 99.6 3.4E-15 1.2E-19 115.1 5.9 56 110-170 6-62 (146)
64 1k2e_A Nudix homolog; nudix/MU 99.6 6.2E-15 2.1E-19 115.5 7.3 59 109-173 2-60 (156)
65 1u20_A U8 snoRNA-binding prote 99.5 6.8E-15 2.3E-19 121.7 7.6 101 110-224 46-161 (212)
66 2dsc_A ADP-sugar pyrophosphata 99.5 1.9E-14 6.5E-19 118.7 9.9 97 120-224 77-179 (212)
67 3e57_A Uncharacterized protein 99.5 1.3E-14 4.5E-19 120.2 7.4 98 109-211 68-174 (211)
68 3fsp_A A/G-specific adenine gl 99.5 6.5E-14 2.2E-18 125.0 10.8 89 107-204 239-327 (369)
69 3fjy_A Probable MUTT1 protein; 99.5 1.5E-13 5.1E-18 122.1 10.1 101 118-223 36-153 (364)
70 2dho_A Isopentenyl-diphosphate 99.4 1.8E-12 6.2E-17 109.0 13.2 112 108-223 59-185 (235)
71 2pny_A Isopentenyl-diphosphate 99.4 2.4E-12 8.3E-17 108.9 11.9 112 108-223 70-196 (246)
72 3dup_A MUTT/nudix family prote 99.4 1E-11 3.4E-16 107.9 15.3 179 24-224 53-238 (300)
73 2xsq_A U8 snoRNA-decapping enz 99.4 5.2E-13 1.8E-17 111.0 6.8 92 121-224 66-169 (217)
74 3kvh_A Protein syndesmos; NUDT 99.3 1.2E-12 4.2E-17 106.0 4.7 89 121-223 45-144 (214)
75 1q33_A Pyrophosphatase, ADP-ri 99.2 4.2E-11 1.4E-15 103.7 10.7 42 121-167 140-181 (292)
76 3qsj_A Nudix hydrolase; struct 99.2 4.3E-11 1.5E-15 100.4 10.2 112 107-223 7-183 (232)
77 3bho_A Cleavage and polyadenyl 99.1 6.7E-10 2.3E-14 90.8 10.4 62 108-175 58-128 (208)
78 3rh7_A Hypothetical oxidoreduc 98.9 5.4E-09 1.9E-13 91.5 9.0 79 107-205 182-261 (321)
79 3fix_A N-acetyltransferase; te 37.8 88 0.003 22.6 6.4 51 40-90 129-179 (183)
80 1wwz_A Hypothetical protein PH 34.7 90 0.0031 22.2 6.0 50 43-93 107-156 (159)
81 2oh1_A Acetyltransferase, GNAT 30.7 1.3E+02 0.0046 21.1 6.3 52 42-93 124-175 (179)
82 4ava_A Lysine acetyltransferas 26.5 1.6E+02 0.0055 23.9 6.8 54 42-95 253-306 (333)
83 3lod_A Putative acyl-COA N-acy 23.6 1.8E+02 0.0062 19.9 6.6 43 41-83 94-136 (162)
84 3eo4_A Uncharacterized protein 22.4 2E+02 0.0068 20.0 5.9 48 42-89 111-158 (164)
85 3g8w_A Lactococcal prophage PS 21.9 1.5E+02 0.0051 20.7 5.1 45 42-86 102-146 (169)
86 2eui_A Probable acetyltransfer 20.4 1.8E+02 0.006 19.5 5.1 49 41-89 98-146 (153)
No 1
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=99.91 E-value=7.7e-25 Score=163.24 Aligned_cols=87 Identities=31% Similarity=0.712 Sum_probs=80.1
Q ss_pred ccceeccccCCCcEEEec-----CCCCChHHHHHHHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCce
Q 027305 13 NKFLNGINDNYGGVVVQM-----NEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNY 87 (225)
Q Consensus 13 ~~~~~~~~d~~~gv~i~~-----~~~~~~~~f~~~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~ 87 (225)
..+|+|..|+||||+|+. ..+.|.+.|.+.|+.||+.|+++|+++|||++|+.++++++.+++.||.||||+++|
T Consensus 22 ~~~l~g~~DrygGV~Vd~~~l~~~~~~d~~~F~~~L~~SL~~Wr~~gk~~IWlklpi~~s~lIp~a~~~GF~fHHAe~dy 101 (113)
T 3fxt_A 22 SMDLQGELDRFGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAESDS 101 (113)
T ss_dssp CCCCCCEECTTSCEEEEHHHHTTTSCBCHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGGGHHHHHHTTCEEEEEEBTE
T ss_pred cccccCCccCcCCEEEeCCccCCcCcCCHHHHHHHHHHHHHHHHHcCCeeEEEEcCHHHhhhHHHHHHcCceeecCCCCe
Confidence 468899999999999997 246799999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeCCCCC
Q 027305 88 LMLVYWIPGGAN 99 (225)
Q Consensus 88 ~~l~~~l~~~~~ 99 (225)
+||++||+++++
T Consensus 102 lmL~~WLpe~ps 113 (113)
T 3fxt_A 102 STLTLWLREGPS 113 (113)
T ss_dssp EEEEEECCC---
T ss_pred EEEEEecCcCCC
Confidence 999999998763
No 2
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.81 E-value=6e-19 Score=138.86 Aligned_cols=120 Identities=20% Similarity=0.259 Sum_probs=92.7
Q ss_pred CCCCCCCCCcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEE
Q 027305 97 GANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (225)
Q Consensus 97 ~~~~~p~~~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~ 176 (225)
.+..++.....+++|++++++ +++|||++|.+.+ ..+.|.||||.+++||++.+||+||++||||+++....+++..
T Consensus 18 ~p~~m~~~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 94 (157)
T 4dyw_A 18 GPGSMQHTEQPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVV 94 (157)
T ss_dssp --------CCCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEE
T ss_pred CCCCCCCCCCceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEE
Confidence 456666667788889988888 6899999998654 3589999999999999999999999999999999888888876
Q ss_pred EEEeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 177 YVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
.+.+. ....+....+|.+....+.+...+..+..++.|+++..
T Consensus 95 ~~~~~-----~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~e 137 (157)
T 4dyw_A 95 DHIDA-----ANGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDD 137 (157)
T ss_dssp EEEET-----TTTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTS
T ss_pred Eeecc-----CCCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHH
Confidence 55432 12455677889988888887777777888888888764
No 3
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.80 E-value=6.1e-19 Score=135.90 Aligned_cols=103 Identities=21% Similarity=0.295 Sum_probs=76.0
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
.++++++|++ +++|||++|+ .|.|.||||++++|||+.+||+||++||||+++.....++...+.+....
T Consensus 4 ~~aag~vv~~-~~~vLL~~r~------~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~--- 73 (134)
T 3i7u_A 4 EFSAGGVLFK-DGEVLLIKTP------SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKG--- 73 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECT------TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETT---
T ss_pred EEEEEEEEEE-CCEEEEEEeC------CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCC---
Confidence 4577777776 5899999875 37899999999999999999999999999999988888877655443211
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEec
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLI 222 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~ 222 (225)
...+...++|.+....+.+.+.+ |..++-|+++
T Consensus 74 ~~~~~~~~~f~~~~~~~~~~~~~--E~~~~~W~~~ 106 (134)
T 3i7u_A 74 ERIFKTVKYYLMKYKEGEPRPSW--EVKDAKFFPI 106 (134)
T ss_dssp EEEEEEEEEEEEEEEEECCCCCT--TSSEEEEEEH
T ss_pred ceEEEEEEEEEEEEcCCcCcCCh--hheEEEEEEH
Confidence 11234456788888877776643 3444444443
No 4
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.78 E-value=6.8e-18 Score=131.70 Aligned_cols=109 Identities=21% Similarity=0.227 Sum_probs=85.7
Q ss_pred cceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeee
Q 027305 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIF 185 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (225)
...++|++++++.+++|||++|.......+|.|.||||.+++||++.+||+||++||||+.+....+++...+.+
T Consensus 6 ~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~----- 80 (153)
T 3grn_A 6 PYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFEL----- 80 (153)
T ss_dssp CEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEEEEEEC-----
T ss_pred ceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEEEEEec-----
Confidence 356788888898889999999987522235999999999999999999999999999999999888887765432
Q ss_pred eeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 186 YVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 186 ~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
++.+....+|.+....+.+... .+..++.|+++.
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~W~~~~ 114 (153)
T 3grn_A 81 --TEKKVIAIVFDGGYVVADVKLS--YEHIEYSWVSLE 114 (153)
T ss_dssp --SSCEEEEEEEEEEECCCCCCCC--TTEEEEEEECHH
T ss_pred --CCceEEEEEEEEEecCCcEecC--CCcceEEEEEHH
Confidence 3566778889888877765543 455566666553
No 5
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.75 E-value=8.3e-18 Score=131.91 Aligned_cols=118 Identities=21% Similarity=0.394 Sum_probs=82.6
Q ss_pred CCCCCCCCCcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEE
Q 027305 97 GANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (225)
Q Consensus 97 ~~~~~p~~~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~ 176 (225)
++.+.+..+.....+++++++.+++|||++|.....+ .|.|.||||.+++||++.+||+||++||||+.+....+....
T Consensus 18 gP~~~~~~~~~~~~~~~~i~~~~~~vLL~~r~~~~~~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 96 (158)
T 3hhj_A 18 GPGSMPIKSSLLIVVACALLDQDNRVLLTQRPEGKSL-AGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLT 96 (158)
T ss_dssp ---------CEEEEEEEEEBCTTSEEEEEECCCTTSC-CCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEE
T ss_pred CCccCCCCCceEEEEEEEEEeCCCEEEEEEeCCCCCC-CCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEE
Confidence 4555665566667777788888899999999866555 599999999999999999999999999999999877543332
Q ss_pred EEEeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 177 YVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
... +.+.+.+....+|.+....+.+.. .+..++.|+.+.
T Consensus 97 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~e~~~~~W~~~~ 135 (158)
T 3hhj_A 97 FAS-----HGYETFHLLMPLYFCSHYKGVAQG---REGQNLKWIFIN 135 (158)
T ss_dssp EEE-----EECSSCEEEEEEEEESCCBSCCCC---TTSCEEEEEEGG
T ss_pred EEe-----eccCCcEEEEEEEEEEECCCccCC---ccccceEEEcHH
Confidence 211 223466788889999887765544 344556666654
No 6
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.75 E-value=1.8e-17 Score=129.55 Aligned_cols=111 Identities=24% Similarity=0.297 Sum_probs=85.3
Q ss_pred cceeEEEEEEEeCCceEEEEEeec---CCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeee
Q 027305 106 SHRVGVGAFVMNGKREVLVVQENS---GRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLK 182 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~vLl~~r~~---~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~ 182 (225)
....++++++++.++++||++|.. .+. ..|.|.||||.+++||++.+||+||++||||+.+....+++...+.+.
T Consensus 11 ~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~-~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~- 88 (159)
T 1sjy_A 11 VELRAAGVVLLNERGDILLVQEKGIPGHPE-KAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFP- 88 (159)
T ss_dssp CCEEEEEEEEBCTTCCEEEEEESCC----C-CCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECT-
T ss_pred eEEEeEEEEEEeCCCCEEEEEecccCcCCC-CCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccC-
Confidence 345677778888889999999885 222 258999999999999999999999999999999988787776654321
Q ss_pred eeeeeCCccEEEEEEEEEeeCCe-eeecCCceeeeEEEEecc
Q 027305 183 RIFYVESKPLLFIIFQFEVYTSL-PVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 183 ~~~~~~~~~~~~~~f~~~~~~g~-~~~~e~~e~~~~f~v~~~ 223 (225)
...+....+|.+....+. +...+..|..++.|+++.
T Consensus 89 -----~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~ 125 (159)
T 1sjy_A 89 -----DGVLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSRE 125 (159)
T ss_dssp -----TSCEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHH
T ss_pred -----CCceEEEEEEEEEccCCCccccCCCCceeEEEEecHH
Confidence 115677889999887776 544356677888888764
No 7
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.75 E-value=1.4e-17 Score=127.99 Aligned_cols=108 Identities=21% Similarity=0.311 Sum_probs=80.9
Q ss_pred ceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 107 ~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
....+++++++.+++|||++|.....+ +|.|.||||.+++||++.+||+||++||||+.+....+....... +.
T Consensus 7 ~~~~~~~vi~~~~~~vLl~~r~~~~~~-~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~-----~~ 80 (144)
T 3r03_A 7 ILLVTAAALIDPDGRVLLAQRPPGKSL-AGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFAS-----HS 80 (144)
T ss_dssp EEEEEEEEEBCTTSCEEEEECCTTSSS-TTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEE-----EE
T ss_pred eeEEEEEEEEcCCCEEEEEEeCCCCCC-CCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeee-----cc
Confidence 345566677888899999999876554 599999999999999999999999999999999877544332211 22
Q ss_pred eCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 187 VESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
+.+.+....+|.+....+.+.. .+..++.|+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---~e~~~~~W~~~~ 114 (144)
T 3r03_A 81 YDTFHLLMPLYACRSWRGRATA---REGQTLAWVRAE 114 (144)
T ss_dssp CSSSEEEEEEEEECCCBSCCCC---CSSCEEEEECGG
T ss_pred CCCeEEEEEEEEEEecCCccCC---CCcceEEEEeHH
Confidence 3567788899999887775553 334556666654
No 8
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=130.20 Aligned_cols=107 Identities=23% Similarity=0.252 Sum_probs=82.8
Q ss_pred cceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeee
Q 027305 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIF 185 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (225)
.....+++++++.+++|||++|.+.+ ..|.|.+|||++++||++.+||+||++||||+++....+++....
T Consensus 18 ~~~~~v~~~i~~~~~~vLl~~r~~~~--~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~------- 88 (156)
T 3gg6_A 18 NVCYVVLAVFLSEQDEVLLIQEAKRE--CRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEER------- 88 (156)
T ss_dssp TCEEEEEEECBCTTSEEEEEECCCTT--STTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEES-------
T ss_pred ceEEEEEEEEEeCCCEEEEEEecCCC--CCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcC-------
Confidence 34456777788888999999998654 358999999999999999999999999999999988777765431
Q ss_pred eeCCccEEEEEEEEEeeCCeeee--cCCceeeeEEEEeccc
Q 027305 186 YVESKPLLFIIFQFEVYTSLPVC--HCGQAMMQRFEVLIAF 224 (225)
Q Consensus 186 ~~~~~~~~~~~f~~~~~~g~~~~--~e~~e~~~~f~v~~~~ 224 (225)
......++|.+....+.+.. .+..|..+..|+++..
T Consensus 89 ---~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~e 126 (156)
T 3gg6_A 89 ---GPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTS 126 (156)
T ss_dssp ---STTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTS
T ss_pred ---CCCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHH
Confidence 23456678888877665553 2446777888887754
No 9
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.75 E-value=2.5e-17 Score=129.15 Aligned_cols=106 Identities=23% Similarity=0.266 Sum_probs=76.2
Q ss_pred EEEEEEE---------eCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEe
Q 027305 110 GVGAFVM---------NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIF 180 (225)
Q Consensus 110 ~v~~~v~---------~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~ 180 (225)
+++++++ |++.++||+||.++ ++.|.||||++++|||+.+||+||++||||+++....+++......
T Consensus 5 a~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 80 (155)
T 3u53_A 5 ACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKREL 80 (155)
T ss_dssp EEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEE
T ss_pred EeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeee
Confidence 5676776 45678999999764 4789999999999999999999999999999998888776544332
Q ss_pred eeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEec
Q 027305 181 LKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLI 222 (225)
Q Consensus 181 ~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~ 222 (225)
. +..........+|.+....+........|..++-|+++
T Consensus 81 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~ 119 (155)
T 3u53_A 81 N---YVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGL 119 (155)
T ss_dssp E---EEETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECH
T ss_pred e---cCCCcceeEEEEEEEEEeccCCccCCCcceeEEEEeEH
Confidence 2 12234445556666666655545444456666666654
No 10
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.74 E-value=1.5e-17 Score=127.86 Aligned_cols=103 Identities=22% Similarity=0.156 Sum_probs=75.6
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCC--CCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRF--RGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIF 185 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~--~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (225)
...+++++.+ ++++||++|...+. + +|.|.||||.+++||++.+||+||++||||+++....+++...+.
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~-~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~------ 77 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYT-SFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHT------ 77 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC----------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECC------
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCC-CCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEE------
Confidence 3455666666 79999999987653 3 489999999999999999999999999999999888877765432
Q ss_pred eeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEec
Q 027305 186 YVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLI 222 (225)
Q Consensus 186 ~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~ 222 (225)
+++.+....+|.+....+.+... +..+..|+++
T Consensus 78 -~~~~~~~~~~f~~~~~~~~~~~~---E~~~~~W~~~ 110 (140)
T 3gwy_A 78 -YPDFEITMHAFLCHPVGQRYVLK---EHIAAQWLST 110 (140)
T ss_dssp -CSSCCEEEEEEEEEECCSCCCCC---SSCEEEEECH
T ss_pred -eCCceEEEEEEEEEecCCccccc---ccceeEeccH
Confidence 34567888999999887765543 4445555554
No 11
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.74 E-value=4.5e-17 Score=128.55 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=75.6
Q ss_pred cceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEE-eeeee
Q 027305 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVI-FLKRI 184 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~-~~~~~ 184 (225)
.....+++++++.+++|||++|.......+|.|.+|||.+++||++++||+||++||||+++....++...... .....
T Consensus 25 ~~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3oga_A 25 MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKT 104 (165)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEe
Confidence 34445555666778999999987543223589999999999999999999999999999999877766543111 00001
Q ss_pred eeeC---CccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 185 FYVE---SKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 185 ~~~~---~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
+... .....+.+|.+....+.+... .|..++.|+++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~E~~~~~W~~~~e 145 (165)
T 3oga_A 105 YADGRQEEIYMIYLIFDCVSANRDICIN--DEFQDYAWVKPEE 145 (165)
T ss_dssp C--CCEEEEEEEEEEEEEEESCCCCCCC--TTEEEEEEECGGG
T ss_pred cCCCCceeEEEEEEEEEeeccCCCccCC--chheeeEEccHHH
Confidence 1111 123456677777766655443 4666777776653
No 12
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.74 E-value=3.3e-17 Score=126.88 Aligned_cols=105 Identities=22% Similarity=0.280 Sum_probs=80.5
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
.+.+++++++.++++||++|...+.+ .|.|.||||.+++||++.+||+||++||||+.+....+++...+.+
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~~~-~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~------- 92 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENNSL-AGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSY------- 92 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTSTT-TTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEE-------
T ss_pred eEEEEEEEEEECCEEEEEEeCCCCCC-CCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEec-------
Confidence 34555566677799999999876554 5999999999999999999999999999999998888887754433
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
++.....++|.+....+.+.. .+..+..|+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~---~e~~~~~W~~~~ 125 (153)
T 3ees_A 93 GDVGILILFYEILYWKGEPRA---KHHMMLEWIHPE 125 (153)
T ss_dssp TTEEEEEEEEEECEEESCCCC---SSSSEEEEECGG
T ss_pred CCCeEEEEEEEEEECCCCcCC---CccceEEEecHH
Confidence 355667788988887665443 334456666654
No 13
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.74 E-value=1.7e-17 Score=125.91 Aligned_cols=104 Identities=22% Similarity=0.293 Sum_probs=79.3
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
..++++++++ +++|||++|.. |.|.+|||.+++||++.+||+||++||||+++.....++...+.+....
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~--- 73 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKG--- 73 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETT---
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCC---
Confidence 4577778888 57999999863 7899999999999999999999999999999988888887665544211
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
...+...++|.+....+.+...+ +..+..|+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~--e~~~~~W~~~~ 107 (134)
T 2pbt_A 74 ERIFKTVKYYLMKYKEGEPRPSW--EVKDAKFFPIK 107 (134)
T ss_dssp EEEEEEEEEEEEEEEEECCCCCT--TSSEEEEEEHH
T ss_pred cEEEEEEEEEEEEecCCCcCCCc--ceeEEEEEcHH
Confidence 12345678888887766655444 66666666653
No 14
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.73 E-value=6e-18 Score=132.38 Aligned_cols=114 Identities=15% Similarity=0.104 Sum_probs=83.2
Q ss_pred ceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCccc--ceeEEEEEEEEeeeee
Q 027305 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTE--FVEVLAFRYVIFLKRI 184 (225)
Q Consensus 107 ~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~--~~~~l~~~~~~~~~~~ 184 (225)
..+++++++++.++++||++|...+ ..|.|.+|||.+++||++.+||+||++||||+.+. ...+++...+.+....
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~~--~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 94 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNRP--AQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNF 94 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSSS--STTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSBT
T ss_pred cEEEEEEEEEcCCCEEEEEeccCCC--CCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEcccc
Confidence 4578888888888999999998644 25899999999999999999999999999999953 5677777665443210
Q ss_pred ee-eCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 185 FY-VESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 185 ~~-~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.. ....+....+|.+....+.+. ....+..+..|+++.
T Consensus 95 ~~~~~~~~~~~~~f~~~~~~~~~~-~~~~e~~~~~W~~~~ 133 (160)
T 1rya_A 95 SGTDFTTHYVVLGFRFRVSEEELL-LPDEQHDDYRWLTSD 133 (160)
T ss_dssp TBSSSCEEEEEEEEEEECCGGGCC-CCSSSEEEEEEECHH
T ss_pred cCCCcCcEEEEEEEEEEcCccccc-cCCCccceEEEecHH
Confidence 00 012256778888887665443 234566677777654
No 15
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.73 E-value=2.4e-17 Score=128.28 Aligned_cols=106 Identities=25% Similarity=0.352 Sum_probs=80.6
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
.+++++++ +.++++||++|... +.+.|.+|||++++||++.+||+||++||||+++....+++...+.+.
T Consensus 5 ~~~v~~ii-~~~~~vLl~~r~~~---~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~------ 74 (153)
T 3shd_A 5 HVTVACVV-HAEGKFLVVEETIN---GKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAP------ 74 (153)
T ss_dssp EEEEEEEE-EETTEEEEEEEEET---TEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCT------
T ss_pred ceEEEEEE-EeCCEEEEEEecCC---CCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecC------
Confidence 44555444 45789999998732 358899999999999999999999999999999998888887654332
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.......++|.+....+.+...+..|..+..|+++.
T Consensus 75 ~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~ 110 (153)
T 3shd_A 75 DKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAE 110 (153)
T ss_dssp TSCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHH
T ss_pred CCceEEEEEEEEEccccCcCCCCcccceeeEEecHH
Confidence 234566788999887765455556677777777764
No 16
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.73 E-value=3.4e-17 Score=123.10 Aligned_cols=100 Identities=29% Similarity=0.347 Sum_probs=77.3
Q ss_pred eEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeC
Q 027305 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVE 188 (225)
Q Consensus 109 ~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 188 (225)
+++++++++.++++||++|.. |.|.+|||++++||++.+||+||++||||+.+.....++...+.+ .
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~------g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~-------~ 69 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM------GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVN-------P 69 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT------SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEEC-------T
T ss_pred eEEEEEEEcCCCEEEEEEECC------CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEec-------C
Confidence 578888999889999999863 679999999999999999999999999999998777777654332 3
Q ss_pred CccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 189 SKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 189 ~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
+.+....+|.+....+.+ ....+..+..|+++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~--~~~~e~~~~~w~~~~ 102 (126)
T 1vcd_A 70 KGVEREVHWFLMRGEGAP--RLEEGMTGAGWFSPE 102 (126)
T ss_dssp TSCEEEEEEEEEEEESCC--CCCTTCCEEEEECHH
T ss_pred CceEEEEEEEEEEcCCCC--CCCcceeeeEEcCHH
Confidence 445667778877665552 233556666776653
No 17
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.73 E-value=6.3e-17 Score=124.10 Aligned_cols=109 Identities=14% Similarity=0.164 Sum_probs=79.3
Q ss_pred CCcceeEEEEEEEe--CCce--EEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEE
Q 027305 104 NASHRVGVGAFVMN--GKRE--VLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVI 179 (225)
Q Consensus 104 ~~~~~~~v~~~v~~--~~~~--vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~ 179 (225)
+..+.+++++++++ .+++ +||++|...+ +.|.+|||++++||++.+||+||++||||+.+....+++...+.
T Consensus 5 y~~p~~~v~~vi~~~~~~~~~~vLl~~r~~~~----~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 80 (139)
T 2yyh_A 5 VKTPLLATDVIIRLWDGENFKGIVLIERKYPP----VGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVYSDP 80 (139)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEEECSSS----CSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECCT
T ss_pred ccCCeEEEEEEEEEEcCCCcEEEEEEEecCCC----CcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEECCC
Confidence 44566778888876 6787 9999987643 34999999999999999999999999999998776666543221
Q ss_pred eeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 180 FLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 180 ~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
......+....+|.+.. .+.+. ...+..+..|+++..
T Consensus 81 -----~~~~~~~~~~~~f~~~~-~~~~~--~~~e~~~~~W~~~~e 117 (139)
T 2yyh_A 81 -----ERDPRAHVVSVVWIGDA-QGEPK--AGSDAKKVKVYRLEE 117 (139)
T ss_dssp -----TSCTTSCEEEEEEEEEE-ESCCC--CCTTEEEEEEECTTS
T ss_pred -----CcCCCceEEEEEEEEec-CCccC--CCCCcceEEEEEHHH
Confidence 11123567778888887 55544 345666677776643
No 18
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.73 E-value=5.4e-17 Score=130.29 Aligned_cols=104 Identities=21% Similarity=0.218 Sum_probs=78.1
Q ss_pred EEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeCC
Q 027305 110 GVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVES 189 (225)
Q Consensus 110 ~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~ 189 (225)
.+++++++.+++|||++|.++. ..|.|.||||++++||++++||+||++||||+.+.....++...+.+. ...
T Consensus 26 ~~~~~vi~~~~~vLL~~r~~~~--~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~-----~~~ 98 (176)
T 3q93_A 26 LYTLVLVLQPQRVLLGMKKRGF--GAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFV-----GEP 98 (176)
T ss_dssp EEEEEEEECSSEEEEEEECSST--TTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEET-----TCS
T ss_pred EEEEEEEEeCCEEEEEEEcCCC--CCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcC-----CCC
Confidence 3444566677999999986644 369999999999999999999999999999999998888887765432 123
Q ss_pred ccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 190 KPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 190 ~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.+....+|.+....+.+...+..+ ..|+++.
T Consensus 99 ~~~~~~~f~~~~~~~~~~~~e~~~---~~W~~~~ 129 (176)
T 3q93_A 99 ELMDVHVFCTDSIQGTPVESDEMR---PCWFQLD 129 (176)
T ss_dssp CEEEEEEEEESCEESCCCCCSSEE---EEEEETT
T ss_pred cEEEEEEEEEECCCCCcCCCccee---eEEeeHH
Confidence 456778898887777766554433 3455443
No 19
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.73 E-value=9.8e-17 Score=122.43 Aligned_cols=108 Identities=22% Similarity=0.233 Sum_probs=76.6
Q ss_pred eeEEEEEEEeC---CceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeee
Q 027305 108 RVGVGAFVMNG---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRI 184 (225)
Q Consensus 108 ~~~v~~~v~~~---~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 184 (225)
..++++++++. ++++||++|+. +++.|.+|||++++||++.+||+||++||||+.+....+++...... .
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~---~ 75 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETL---F 75 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEE---E
T ss_pred eEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceE---E
Confidence 35677777765 46899999873 24799999999999999999999999999999877666653111111 1
Q ss_pred eeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 185 FYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 185 ~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
+..+..+....+|.+....+. ......|..+..|+++.
T Consensus 76 ~~~~~~~~~~~~f~~~~~~~~-~~~~~~e~~~~~W~~~~ 113 (138)
T 1ktg_A 76 YEAKGKPKSVKYWLAKLNNPD-DVQLSHEHQNWKWCELE 113 (138)
T ss_dssp EEETTEEEEEEEEEEEECSCC-CCCCCTTEEEEEEECHH
T ss_pred EEeCCCceEEEEEEEEecCCc-ccCCCchhcEeEeccHH
Confidence 122345677888988876642 23345667777777654
No 20
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.72 E-value=1.9e-17 Score=134.37 Aligned_cols=114 Identities=20% Similarity=0.172 Sum_probs=78.9
Q ss_pred CCCcceeEEEEEEEeCCc--eEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEe
Q 027305 103 ANASHRVGVGAFVMNGKR--EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIF 180 (225)
Q Consensus 103 ~~~~~~~~v~~~v~~~~~--~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~ 180 (225)
..+..+.++++++++.++ +|||++|........|.|.||||++++||++++||+||++||||+++.....++.....+
T Consensus 29 ~~~~~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~ 108 (194)
T 1nqz_A 29 ELPHYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVF 108 (194)
T ss_dssp ----CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCEE
T ss_pred cCCCCceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCcc
Confidence 334456677777778777 899999875422235899999999999999999999999999999999888887654332
Q ss_pred eeeeeeeCCccEEEEEEEEEeeCCee-eecCCceeeeEEEEecc
Q 027305 181 LKRIFYVESKPLLFIIFQFEVYTSLP-VCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 181 ~~~~~~~~~~~~~~~~f~~~~~~g~~-~~~e~~e~~~~f~v~~~ 223 (225)
. ......++|.+....+.. ...+..|..+..|+++.
T Consensus 109 ~-------~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~ 145 (194)
T 1nqz_A 109 T-------PVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLA 145 (194)
T ss_dssp E-------TTTEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHH
T ss_pred C-------CCCeEEEEEEEEecCCccccCCCccceeEEEEEEHH
Confidence 1 334566778877653322 33455677777777654
No 21
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.72 E-value=3.5e-17 Score=129.16 Aligned_cols=109 Identities=21% Similarity=0.102 Sum_probs=82.9
Q ss_pred cceeEEEEEEEeCC-ceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeee
Q 027305 106 SHRVGVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRI 184 (225)
Q Consensus 106 ~~~~~v~~~v~~~~-~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 184 (225)
...+++++++++++ ++|||++|.. ..|. |.|+||||.+++||++.+||+||++||||+.+....+++.....+.
T Consensus 8 ~~~~~v~~vi~~~~~~~vLL~~r~~-~~~~-g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~--- 82 (161)
T 3exq_A 8 PVELVTMVMVTDPETQRVLVEDKVN-VPWK-AGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDD--- 82 (161)
T ss_dssp CEEEEEEEEEBCTTTCCEEEECCCC-CTTT-CSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECS---
T ss_pred CceEEEEEEEEeCCCCEEEEEEccC-CCCC-CCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccC---
Confidence 45567777777766 7999999874 3443 6799999999999999999999999999999998888887654431
Q ss_pred eeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 185 FYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 185 ~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
....+....+|.+....+.+...| ..+..|+++..
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~e---~~~~~W~~~~e 117 (161)
T 3exq_A 83 --DRQHRKLGLLYRASNFTGTLKASA---EGQLSWLPITA 117 (161)
T ss_dssp --SCSSEEEEEEEEECCEESCCCGGG---TTTEEEECGGG
T ss_pred --CCCeEEEEEEEEEeccCCccCCCc---cceEEEeeHHH
Confidence 234567788898888777665433 34566666643
No 22
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.72 E-value=8.4e-18 Score=130.56 Aligned_cols=108 Identities=18% Similarity=0.102 Sum_probs=70.7
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
..+|++++++.++++||+++++.+. +.+.|+||||++++||++++||+||++||||+++.....++.. +.. .
T Consensus 5 ~~~v~vi~~~~~~~vLLv~~~r~~~-~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~---~~~----~ 76 (145)
T 2w4e_A 5 PRAVFILPVTAQGEAVLIRQFRYPL-RATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGF---YPQ----P 76 (145)
T ss_dssp CEEEEEEEEETTSEEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCB---BSC----T
T ss_pred CCEEEEEEEcCCCEEEEEEEEecCC-CCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecC---cCC----C
Confidence 3578888888889998887654432 2468999999999999999999999999999998765555431 110 1
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.......++|.+....+.....+..|..+..|+++.
T Consensus 77 ~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~ 112 (145)
T 2w4e_A 77 SISGVVFYPLLALGVTLGAAQLEDTETIERVVLPLA 112 (145)
T ss_dssp TTCCCEEEEEEEEEEEEC--------CEEEEEEEHH
T ss_pred CccCceEEEEEEEecccCCCCCCCCCeEEEEEEeHH
Confidence 122334567777643322233445667788888764
No 23
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.72 E-value=4.2e-17 Score=126.64 Aligned_cols=108 Identities=21% Similarity=0.146 Sum_probs=77.9
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
++++++++ +.++++||++|...+. ++.|.+|||++++||++.+||+||++||||+++....+++...+.+..
T Consensus 8 ~~~v~~ii-~~~~~vLl~~r~~~~~--~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~----- 79 (153)
T 2b0v_A 8 NVTVAAVI-EQDDKYLLVEEIPRGT--AIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCAS----- 79 (153)
T ss_dssp EEEEEEEC-EETTEEEEEEECSSSS--CCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETT-----
T ss_pred CEEEEEEE-eeCCEEEEEEEcCCCC--CCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCC-----
Confidence 44555544 4568999999876543 589999999999999999999999999999999887877766543221
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
...+....+|.+....+.+......+..+..|+++.
T Consensus 80 ~~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~ 115 (153)
T 2b0v_A 80 NGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSID 115 (153)
T ss_dssp TTEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHH
T ss_pred CCcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHH
Confidence 133455677888876554423334566677777654
No 24
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.72 E-value=4.5e-17 Score=127.92 Aligned_cols=110 Identities=14% Similarity=0.013 Sum_probs=78.4
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEE-----------
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR----------- 176 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~----------- 176 (225)
..++++++++ +++|||++|+. .|.|.+|||++++||++.+||+||++||||+++.....++..
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 79 (159)
T 3f6a_A 6 HFTVSVFIVC-KDKVLLHLHKK-----AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEK 79 (159)
T ss_dssp CEEEEEEEEE-TTEEEEEECSS-----SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCE
T ss_pred eEEEEEEEEE-CCEEEEEEcCC-----CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccccccc
Confidence 4567777777 68999999874 488999999999999999999999999999998776665321
Q ss_pred EEEee--eeeeee-CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 177 YVIFL--KRIFYV-ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 177 ~~~~~--~~~~~~-~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
....+ ...+.+ ........+|.+....+.+.. +..|..+..|+++..
T Consensus 80 ~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~E~~~~~W~~~~e 129 (159)
T 3f6a_A 80 LLINPIHTILGDVSPNHSHIDFVYYATTTSFETSP-EIGESKILKWYSKED 129 (159)
T ss_dssp EECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCC-CTTSCCCEEEECSSS
T ss_pred cccCccccccccCCCCceEEEEEEEEEeCCCCcCC-CCCcccceEEeeHHH
Confidence 00000 000111 223355678999988777665 556777788887654
No 25
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.71 E-value=9.5e-17 Score=127.40 Aligned_cols=106 Identities=25% Similarity=0.319 Sum_probs=76.3
Q ss_pred ceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 107 ~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
..+.|++++++ +++|||++|..+ .|.|.||||.+++||++.+||+||++||||+++....+++.....
T Consensus 22 ~~~~v~~ii~~-~~~vLL~~r~~~----~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~------- 89 (171)
T 3id9_A 22 MQVRVTGILIE-DEKVLLVKQKVA----NRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCDKP------- 89 (171)
T ss_dssp CEEEEEEEEEE-TTEEEEEECSST----TCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEET-------
T ss_pred eEEEEEEEEEE-CCEEEEEEEECC----CCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEccc-------
Confidence 45677777776 589999998763 489999999999999999999999999999998777777655432
Q ss_pred eCCccEEEEEEEEEeeCCeeeec----CCceeeeEEEEeccc
Q 027305 187 VESKPLLFIIFQFEVYTSLPVCH----CGQAMMQRFEVLIAF 224 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~g~~~~~----e~~e~~~~f~v~~~~ 224 (225)
.........+|.+....+.+... +..|..++.|+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~e 131 (171)
T 3id9_A 90 DASPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINE 131 (171)
T ss_dssp TSSSCEEEEEEEEEEC-------------CCCCCEEEEETGG
T ss_pred CCCCcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHH
Confidence 12344566778888777766542 456778888888754
No 26
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.71 E-value=2.8e-17 Score=128.55 Aligned_cols=110 Identities=19% Similarity=0.197 Sum_probs=74.5
Q ss_pred cceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeee
Q 027305 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIF 185 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (225)
....++++++++.+++|||++|. .+.|.||||.+++||++.+||+||++||||+++....+++...... ..+
T Consensus 19 ~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~--~~~ 90 (153)
T 3eds_A 19 IFXPSVAAVIKNEQGEILFQYPG------GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKE--YRY 90 (153)
T ss_dssp EEEEEEEEEEBCTTCCEEEECC---------CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGG--GEE
T ss_pred EEeeeEEEEEEcCCCeEEEEEcC------CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccc--eee
Confidence 34567888888888999998876 3789999999999999999999999999999998877777542100 011
Q ss_pred eeCC---ccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 186 YVES---KPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 186 ~~~~---~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
.+.. .+....+|.+....+.+.. ...|..++.|+++..
T Consensus 91 ~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~E~~~~~W~~~~e 131 (153)
T 3eds_A 91 TYSNGDEVEYIVVVFECEVTSGELRS-IDGESLKLQYFSLSE 131 (153)
T ss_dssp ECTTSCEEEEEEEEEEEEEEEECCC--------CEEEECGGG
T ss_pred ecCCCCeEEEEEEEEEEEecCCcccc-CCCcEEEEEEECHHH
Confidence 1122 2336778888877665544 335666777777654
No 27
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.71 E-value=2.6e-16 Score=127.55 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=80.8
Q ss_pred CcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeee
Q 027305 105 ASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRI 184 (225)
Q Consensus 105 ~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 184 (225)
....+++++++++ +++|||++|...+. .+.|.||||.+++||++++||+||++||||+++....+++...
T Consensus 37 ~~~~~~v~~ii~~-~~~vLL~~r~~~~~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~------- 106 (189)
T 3cng_A 37 QNPKVIVGCIPEW-ENKVLLCKRAIAPY--RGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVYS------- 106 (189)
T ss_dssp CCCEEEEEEEEEE-TTEEEEEEESSSSS--TTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEE-------
T ss_pred CCCceEEEEEEEe-CCEEEEEEccCCCC--CCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEEe-------
Confidence 3456677777777 78999999987542 5899999999999999999999999999999987666554421
Q ss_pred eeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 185 FYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 185 ~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
++..+...++|.+....+.+.. ..|..+..|+++..
T Consensus 107 --~~~~~~~~~~f~~~~~~~~~~~--~~E~~~~~W~~~~e 142 (189)
T 3cng_A 107 --LPHISQVYMLFRAKLLDLDFFP--GIESLEVRLFGEQE 142 (189)
T ss_dssp --EGGGTEEEEEEEEEECCSCCCC--CTTEEEEEEECTTT
T ss_pred --cCCCcEEEEEEEEEeCCCccCC--CccceeEEEECHHH
Confidence 1244677889999987765443 45667777776653
No 28
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.71 E-value=1.1e-16 Score=122.23 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=74.3
Q ss_pred EEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeCCc
Q 027305 111 VGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVESK 190 (225)
Q Consensus 111 v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~ 190 (225)
+++++++.++++||++|...+.+ +|.|+||||.+++||++.+||+||++||||+.+.....++...+.+ ++.
T Consensus 11 ~~~~ii~~~~~vLl~~r~~~~~~-~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~-------~~~ 82 (140)
T 2rrk_A 11 VVAAIIERDGKILLAQRPAQSDQ-AGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREV-------SGR 82 (140)
T ss_dssp EEEEEEEETTEEEEEECCSSCSC-CCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEE-------TTE
T ss_pred EEEEEEEcCCEEEEEEcCCCCCC-CCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEec-------CCc
Confidence 33344467789999999765554 5999999999999999999999999999999998877777654432 345
Q ss_pred cEEEEEEEEEeeCCeeeecCCceeeeEEEEec
Q 027305 191 PLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLI 222 (225)
Q Consensus 191 ~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~ 222 (225)
+....+|.+....+.+.. .+..+..|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~---~e~~~~~W~~~ 111 (140)
T 2rrk_A 83 IIHLHAWHVPDFHGTLQA---HEHQALVWCSP 111 (140)
T ss_dssp EEEEEEEEESEEEECCCC---SSCSCEEEECH
T ss_pred EEEEEEEEEEeeCCCcCC---CccceeEEeCH
Confidence 566788888765544332 33445556654
No 29
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.71 E-value=6.2e-17 Score=133.18 Aligned_cols=110 Identities=21% Similarity=0.193 Sum_probs=80.9
Q ss_pred CCcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeee
Q 027305 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKR 183 (225)
Q Consensus 104 ~~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 183 (225)
+.+..++++++|++ +++|||++|.. .|.|.+|||++++||++.+||+||++||||+++....+++........
T Consensus 64 ~~~~~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~- 136 (205)
T 3q1p_A 64 YQTPKVDIRAVVFQ-NEKLLFVKEKS-----DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQ- 136 (205)
T ss_dssp SCCCEEEEEEEEEE-TTEEEEEEC--------CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHS-
T ss_pred CCCCcceEEEEEEE-CCEEEEEEEcC-----CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEeccccC-
Confidence 44556788888887 68999999873 479999999999999999999999999999999877777765432111
Q ss_pred eeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 184 IFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 184 ~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
+.....+....+|.+....+.+... .|..+..++++.
T Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~~--~E~~~~~w~~~~ 173 (205)
T 3q1p_A 137 -PSPSATHVYKIFIGCEIIGGEKKTS--IETEEVEFFGEN 173 (205)
T ss_dssp -CCCCSSCEEEEEEEEEEEEECCCCC--TTSCCEEEECTT
T ss_pred -CCCCCceEEEEEEEEEecCCccCCC--CcceEEEEEeHH
Confidence 1112456777888888877665543 566666666654
No 30
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.70 E-value=1.6e-16 Score=123.25 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=72.5
Q ss_pred eEEEEEEE---eCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeee
Q 027305 109 VGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIF 185 (225)
Q Consensus 109 ~~v~~~v~---~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (225)
.+|.++++ +.+++|||++|.. .|.|.+|||++++||++.+||+||++||||+++.................+
T Consensus 6 ~~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 80 (149)
T 3son_A 6 FQVLVIPFIKTEANYQFGVLHRTD-----ADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHF 80 (149)
T ss_dssp CEEEEEEEEECSSSEEEEEEEESS-----SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGT
T ss_pred eEEEEEEEEecCCCeEEEEEEEcC-----CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceee
Confidence 45555554 4668999999975 388999999999999999999999999999998764222111111111111
Q ss_pred ee-CCccEEEEEEEEEee--CCeeeecCCceeeeEEEEecc
Q 027305 186 YV-ESKPLLFIIFQFEVY--TSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 186 ~~-~~~~~~~~~f~~~~~--~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.+ ...+...++|.+... .+.+.. ..|..+.-|+++.
T Consensus 81 ~~~~~~~~~~~~f~~~~~~~~~~~~~--~~E~~~~~W~~~~ 119 (149)
T 3son_A 81 SFNKPYVVPEYCFAIDLTSCSYQVTL--SLEHSELRWVSYE 119 (149)
T ss_dssp CSSSCSEEEEEEEEEECTTTGGGCCC--CTTEEEEEEECHH
T ss_pred ccCCceEeEEEEEEEEcCCCCCcccC--CCceeeEEEeCHH
Confidence 21 224566788998887 445444 3566666676653
No 31
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.70 E-value=6.3e-17 Score=132.28 Aligned_cols=119 Identities=29% Similarity=0.332 Sum_probs=74.8
Q ss_pred CCCCCCCCcceeEEEEEEEeC-CceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEE
Q 027305 98 ANTLPANASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (225)
Q Consensus 98 ~~~~p~~~~~~~~v~~~v~~~-~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~ 176 (225)
....+..+.+.++|++++++. +++|||+||+.. ..|.|.+|||++++||++.+||+||++||||+++....+++..
T Consensus 16 ~~~~~~~~~~~v~v~~~v~~~~~~~vLL~~r~~~---~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~ 92 (199)
T 3h95_A 16 ENLYFQSMSHQVGVAGAVFDESTRKILVVQDRNK---LKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIR 92 (199)
T ss_dssp ----------CCEEEEEEEETTTTEEEEEEESSS---STTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred cccccccCcccceEEEEEEeCCCCEEEEEEEcCC---CCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEE
Confidence 344556667888998888875 589999998753 2589999999999999999999999999999998877777653
Q ss_pred EEEeeeeeeeeCCccEEEEEEEEEeeCCee-eecCCceeeeEEEEeccc
Q 027305 177 YVIFLKRIFYVESKPLLFIIFQFEVYTSLP-VCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~-~~~e~~e~~~~f~v~~~~ 224 (225)
..+... . .......+|.+....+.. ...+..|..+..|+++..
T Consensus 93 ~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e 136 (199)
T 3h95_A 93 QQHTNP-G----AFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLND 136 (199)
T ss_dssp ECC--------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHH
T ss_pred eeecCC-C----CceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHH
Confidence 321111 0 112223344444332222 233467788888888753
No 32
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.69 E-value=3.2e-16 Score=125.34 Aligned_cols=107 Identities=16% Similarity=0.060 Sum_probs=79.6
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEE-eeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKF-PTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~l-PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
..++++++++.++++||++|.....+.+|.|.| |||++++||++.+||+||++||||+.+.....++...+.
T Consensus 37 ~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~------- 109 (180)
T 2fkb_A 37 HRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFE------- 109 (180)
T ss_dssp EEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEE-------
T ss_pred eeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEec-------
Confidence 346777788888999999887654333589999 999999999999999999999999998777777654322
Q ss_pred eCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 187 VESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
....+...++|.+. ..+.+. .+..+..+..|+++.
T Consensus 110 ~~~~~~~~~~f~~~-~~~~~~-~~~~E~~~~~W~~~~ 144 (180)
T 2fkb_A 110 DKNCRVWGALFSCV-SHGPFA-LQEDEVSEVCWLTPE 144 (180)
T ss_dssp ETTEEEEEEEEEEE-CCCCCC-CCTTTEEEEEEECHH
T ss_pred CCCceEEEEEEEEe-cCCCcC-CChhHhheEEEecHH
Confidence 23445667888887 444433 345567777777654
No 33
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.69 E-value=9.6e-17 Score=134.23 Aligned_cols=116 Identities=17% Similarity=0.201 Sum_probs=83.3
Q ss_pred CCCCCCcceeEEEEEEE---eCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEE
Q 027305 100 TLPANASHRVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (225)
Q Consensus 100 ~~p~~~~~~~~v~~~v~---~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~ 176 (225)
..+.++.+.++|+++|+ +++++|||++|...+ ..|.|.+|||++++||++++||+||++||||+++.....++..
T Consensus 5 ~~~~~~~p~v~v~~vi~~~~~~~~~vLLv~r~~~~--~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~ 82 (226)
T 2fb1_A 5 YYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEP--AMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAF 82 (226)
T ss_dssp TTTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSS--STTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEE
T ss_pred ccccCCCCeEEEEEEEEEEeCCCCEEEEEECcCCC--CCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEe
Confidence 34556677888888888 456899999998643 3589999999999999999999999999999999877777654
Q ss_pred EEEeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 177 YVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.... ..+..+....+|.+....+... ..+.+..+..|+++.
T Consensus 83 ~~~~-----r~~~~~~v~~~y~a~~~~~~~~-~~~~e~~~~~W~~~~ 123 (226)
T 2fb1_A 83 GAID-----RDPGERVVSIAYYALININEYD-RELVQKHNAYWVNIN 123 (226)
T ss_dssp CCTT-----SSSSSCEEEEEEEEECCTTSSC-HHHHHHTTEEEEETT
T ss_pred CCCC-----cCCCceEEEEEEEEEecCcccc-cCCccccceEEEEHH
Confidence 3211 1123456667788876554332 233455556666554
No 34
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.69 E-value=5.8e-17 Score=128.89 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=73.0
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
+.+|++++++ ++++||+++.+.+. +++.|.+|||++++||++++||+||++||||+ +.....++.... ..
T Consensus 34 ~~~v~vii~~-~~~vLL~~~~r~~~-~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~-------~~ 103 (170)
T 1v8y_A 34 KPAVAVIALR-EGRMLFVRQMRPAV-GLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFV-------SP 103 (170)
T ss_dssp CCEEEEEEEE-TTEEEEEECCBTTT-TBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEES-------CT
T ss_pred CCeEEEEEEE-CCEEEEEEEEeCCC-CCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEec-------CC
Confidence 3577878888 89999998866543 35899999999999999999999999999999 766666654321 11
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.......++|.+....+.+...+..|..+..|+++.
T Consensus 104 ~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~ 139 (170)
T 1v8y_A 104 GFTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPE 139 (170)
T ss_dssp TTBCCEEEEEEEEEEEECC--------CEEEEECHH
T ss_pred CccccEEEEEEEEeccccCCCCCCCceEEEEEEEHH
Confidence 223455677888765444444455677788888764
No 35
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.69 E-value=5.1e-16 Score=120.97 Aligned_cols=107 Identities=17% Similarity=0.132 Sum_probs=78.1
Q ss_pred ceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 107 ~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
..+.+++++++ ++++||++| .|.|.+|||++++||++.+||+||++||||+++....+++...+.+....
T Consensus 18 ~~~~~~~ii~~-~~~vLl~~r-------~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~-- 87 (154)
T 2pqv_A 18 FGVRATALIVQ-NHKLLVTKD-------KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDG-- 87 (154)
T ss_dssp EEEEEEECCEE-TTEEEEEEE-------TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETT--
T ss_pred EeEEEEEEEEE-CCEEEEEec-------CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCC--
Confidence 34566767776 689999998 27899999999999999999999999999999987777776654433111
Q ss_pred eCCccEEEEEEEEEeeCCeee-ecCCceeeeEEEEeccc
Q 027305 187 VESKPLLFIIFQFEVYTSLPV-CHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~g~~~-~~e~~e~~~~f~v~~~~ 224 (225)
...+....+|.+....+.+. ..++.+..+..|+++..
T Consensus 88 -~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~e 125 (154)
T 2pqv_A 88 -VSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDK 125 (154)
T ss_dssp -EEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGG
T ss_pred -CcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHH
Confidence 11234556788887666543 24456677777877654
No 36
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.68 E-value=2.1e-16 Score=121.83 Aligned_cols=109 Identities=18% Similarity=0.087 Sum_probs=76.0
Q ss_pred cceeEEEEEEEeC-CceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeee
Q 027305 106 SHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRI 184 (225)
Q Consensus 106 ~~~~~v~~~v~~~-~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 184 (225)
..+.++++++++. ++++||++|. .|.|.+|||.+++||++.+||+||++||||+.+....+++.....+...
T Consensus 16 ~~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~- 88 (148)
T 2azw_A 16 QTRYAAYIIVSKPENNTMVLVQAP------NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSN- 88 (148)
T ss_dssp EECCEEEEECEEGGGTEEEEEECT------TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEET-
T ss_pred eeeeEEEEEEECCCCCeEEEEEcC------CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCC-
Confidence 4456777788876 6899999973 3789999999999999999999999999999998877777654322110
Q ss_pred eeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 185 FYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 185 ~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
......+....+|.+....+.+.. ..+..+..|+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~W~~~~ 125 (148)
T 2azw_A 89 HRQTAYYNPGYFYVANTWRQLSEP--LERTNTLHWVAPE 125 (148)
T ss_dssp TTTEEEEEEEEEEEEEEEEECSSC--C-CCSEEEEECHH
T ss_pred CCCcceEEEEEEEEEEcCcCCcCC--CCceeeEEEeeHH
Confidence 011123455777888776544332 2344566676653
No 37
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.68 E-value=1.7e-16 Score=129.93 Aligned_cols=107 Identities=16% Similarity=0.100 Sum_probs=76.5
Q ss_pred eEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeC
Q 027305 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVE 188 (225)
Q Consensus 109 ~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 188 (225)
.+|++++++++ ++||+++.+.+. +++.|+||||.+|+||++++||+||++||||+++.....++..... ..
T Consensus 50 ~av~vl~~~~~-~vLLvrq~r~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~-------~~ 120 (198)
T 1vhz_A 50 EAVMIVPIVDD-HLILIREYAVGT-ESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMA-------PS 120 (198)
T ss_dssp CEEEEEEEETT-EEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECC-------TT
T ss_pred CEEEEEEEECC-EEEEEEcccCCC-CCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCC-------CC
Confidence 35666667776 999998765443 3578999999999999999999999999999998777766654311 11
Q ss_pred CccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 189 SKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 189 ~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
......++|.+....+.+...+..|..+..++++..
T Consensus 121 ~~~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~e 156 (198)
T 1vhz_A 121 YFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAH 156 (198)
T ss_dssp TCCCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGG
T ss_pred ccCcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHH
Confidence 223456677777654433344556667778887754
No 38
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.68 E-value=5.5e-16 Score=119.42 Aligned_cols=110 Identities=20% Similarity=0.192 Sum_probs=77.2
Q ss_pred eeEEEEEEEeCC-ceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccce--eEEEEEEEEee---
Q 027305 108 RVGVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFV--EVLAFRYVIFL--- 181 (225)
Q Consensus 108 ~~~v~~~v~~~~-~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~--~~l~~~~~~~~--- 181 (225)
.+++++++++.+ +++||++|... +|.|.+|||++++||++.+||+||++||||+.+... .+++.......
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 84 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIF 84 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeee
Confidence 367888888874 89999998753 479999999999999999999999999999998763 45554332211
Q ss_pred -eeeeeeC--CccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 182 -KRIFYVE--SKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 182 -~~~~~~~--~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
...+.++ ..+....+|.+....+.+.. ..|..+..|+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~--~~E~~~~~W~~~~ 127 (150)
T 2o1c_A 85 SHLRHRYAPGVTRNTESWFCLALPHERQIV--FTEHLAYKWLDAP 127 (150)
T ss_dssp GGGGGGBCTTCCEEEEEEEEEEESSCCCCC--CSSSSCEEEEEHH
T ss_pred cccccccCCCCcceEEEEEEEEcCCCCCcC--hhHhhccEeecHH
Confidence 0111122 34577888988876554432 2556666776653
No 39
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.67 E-value=4e-16 Score=126.61 Aligned_cols=103 Identities=18% Similarity=0.198 Sum_probs=74.0
Q ss_pred EEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeCC
Q 027305 110 GVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVES 189 (225)
Q Consensus 110 ~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~ 189 (225)
.+++++.+ +++|||++|+. .|.|.+|||++++||++.+||+||++||||+++....+++.....+..... ..
T Consensus 6 v~~~vi~~-~~~vLL~~r~~-----~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~--~~ 77 (188)
T 3fk9_A 6 VTNCIVVD-HDQVLLLQKPR-----RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGK--IV 77 (188)
T ss_dssp EEEEEEEE-TTEEEEEECTT-----TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTE--EE
T ss_pred EEEEEEEE-CCEEEEEEeCC-----CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCc--ce
Confidence 44555555 68999999853 489999999999999999999999999999999988888877665432110 01
Q ss_pred ccEEEEEEEEEeeCCeeeecCCceeeeEEEEec
Q 027305 190 KPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLI 222 (225)
Q Consensus 190 ~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~ 222 (225)
.+....+|.+....+.+....... +..|+++
T Consensus 78 ~~~~~~~f~a~~~~~~~~~~~e~~--~~~W~~~ 108 (188)
T 3fk9_A 78 SEWMLFTFKATEHEGEMLKQSPEG--KLEWKKK 108 (188)
T ss_dssp EEEEEEEEEESCEESCCCSEETTE--EEEEEEG
T ss_pred EEEEEEEEEEECCCCCCcCCCCCE--eEEEEEH
Confidence 233678888887777655333233 4445544
No 40
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.67 E-value=5.9e-17 Score=130.09 Aligned_cols=108 Identities=19% Similarity=0.175 Sum_probs=78.7
Q ss_pred ceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 107 ~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
+..++++++++.++++||++|.+.+. +++.|++|||++++||++.+||+||++||||+.+.....++.... .
T Consensus 40 ~~~~v~v~i~~~~~~vLL~~r~~~~~-~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~-------~ 111 (182)
T 2yvp_A 40 PVAASFVLPVTERGTALLVRQYRHPT-GKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHP-------Q 111 (182)
T ss_dssp SCEEEEEEEBCTTSEEEEEEEEEGGG-TEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCS-------C
T ss_pred cCCEEEEEEEcCCCEEEEEEeccCCC-CCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeC-------C
Confidence 34577878888889999999876543 358999999999999999999999999999999887766654311 1
Q ss_pred eCCccEEEEEEEEEeeC--CeeeecCCceeeeEEEEecc
Q 027305 187 VESKPLLFIIFQFEVYT--SLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~--g~~~~~e~~e~~~~f~v~~~ 223 (225)
....+...++|.+.... +. ...+..|..+..|+++.
T Consensus 112 ~~~~~~~~~~f~~~~~~~~~~-~~~~~~E~~~~~W~~~~ 149 (182)
T 2yvp_A 112 PSFTAVVFHPFLALKARVVTP-PTLEEGELLESLELPLT 149 (182)
T ss_dssp TTTBCCEEEEEEECSCEECSC-CCCCTTCCEEEEEEEHH
T ss_pred CCccccEEEEEEEeccccCCC-CCCCCCceEEEEEEEHH
Confidence 12334566777776432 32 22355677788888764
No 41
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.67 E-value=2.8e-16 Score=129.30 Aligned_cols=110 Identities=19% Similarity=0.196 Sum_probs=80.0
Q ss_pred CCcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeee
Q 027305 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKR 183 (225)
Q Consensus 104 ~~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 183 (225)
+++..+++.++|+++ ++|||++|. .+.|.||||.+++||++.+||+||++||||+++....+++.......
T Consensus 66 y~~~~~~v~~vv~~~-~~vLLvrr~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~-- 136 (206)
T 3o8s_A 66 YQTPKLDTRAAIFQE-DKILLVQEN------DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKN-- 136 (206)
T ss_dssp --CCEEEEEEEEEET-TEEEEEECT------TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHH--
T ss_pred CCCCCccEEEEEEEC-CEEEEEEec------CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEecccc--
Confidence 456677888888875 899999987 37899999999999999999999999999999988887776542111
Q ss_pred eeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 184 IFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 184 ~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
.+.....+....+|.+....+.+... .|..+..++++..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~E~~~~~w~~~~e 175 (206)
T 3o8s_A 137 NPAKSAHRVTKVFILCRLLGGEFQPN--SETVASGFFSLDD 175 (206)
T ss_dssp CC-----CEEEEEEEEEEEEECCCCC--SSCSEEEEECTTS
T ss_pred CCCCCCceEEEEEEEEEecCCeecCC--CCceEEEEEeHHH
Confidence 01111356777888888877765543 5566666766643
No 42
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.66 E-value=3e-17 Score=123.61 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=74.1
Q ss_pred EEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeCCcc
Q 027305 112 GAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVESKP 191 (225)
Q Consensus 112 ~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~ 191 (225)
++++++.++++||++|...+.+ +|.|.+|||.+++||++.+||+||++||||+.+.....++...+ .+++.+
T Consensus 8 ~~ii~~~~~~vLl~~r~~~~~~-~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~-------~~~~~~ 79 (129)
T 1mut_A 8 VGIIRNENNEIFITRRAADAHM-ANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEY-------EFPDRH 79 (129)
T ss_dssp CEECEETTTEEEEEECSSCCSS-SCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBC-------CCSSCE
T ss_pred EEEEEecCCEEEEEEeCCCCCC-CCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEE-------ecCCce
Confidence 3456678899999999876544 59999999999999999999999999999999876655554322 224555
Q ss_pred EEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 192 LLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 192 ~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
....+|.+....+.+... +..+..|+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~---e~~~~~W~~~~ 108 (129)
T 1mut_A 80 ITLWFWLVERWEGEPWGK---EGQPGEWMSLV 108 (129)
T ss_dssp EECCCEEEEECSSCCCCC---SSCCCEEEESS
T ss_pred EEEEEEEEEccCCccCCc---ccceeEEeCHH
Confidence 667788888776655433 34445555554
No 43
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.66 E-value=1.1e-16 Score=131.84 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=73.3
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcC-CCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVD-EGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve-~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
..+|++++++.++++||+++.+.+. +.+.|+||||.++ +||++.+||+||++||||+++.....++.. +.
T Consensus 43 ~~av~v~i~~~~~~vLLvrr~r~~~-~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~---~~----- 113 (207)
T 1mk1_A 43 FGAVAIVAMDDNGNIPMVYQYRHTY-GRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDL---DT----- 113 (207)
T ss_dssp CCEEEEEECCTTSEEEEEEEEETTT-TEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEE---CS-----
T ss_pred CCEEEEEEEcCCCEEEEEEeecCCC-CCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEE---Ec-----
Confidence 3477777888889999998876553 3589999999999 999999999999999999998776666543 11
Q ss_pred eCCc-cEEEEEEEEEeeCCeeee--cCCceeeeEEEEecc
Q 027305 187 VESK-PLLFIIFQFEVYTSLPVC--HCGQAMMQRFEVLIA 223 (225)
Q Consensus 187 ~~~~-~~~~~~f~~~~~~g~~~~--~e~~e~~~~f~v~~~ 223 (225)
.+.. ....++|.+....+.+.. .+..|..+..++++.
T Consensus 114 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~ 153 (207)
T 1mk1_A 114 APGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIA 153 (207)
T ss_dssp CTTTBCCCEEEEEEEEEEECCC----------CEEEEEHH
T ss_pred CCCccccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHH
Confidence 1111 224567777765544433 445667777787764
No 44
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.66 E-value=3.6e-16 Score=121.86 Aligned_cols=105 Identities=13% Similarity=0.171 Sum_probs=73.4
Q ss_pred cceeEEEEEEEeCCce----EEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEee
Q 027305 106 SHRVGVGAFVMNGKRE----VLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFL 181 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~----vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~ 181 (225)
....++++++.+ +++ +|+++|...+ + .| |.+|||++++||++.+||+||++||||+++....+++...+...
T Consensus 6 ~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~-~-~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~ 81 (155)
T 2b06_A 6 LTILTNICLIED-LETQRVVMQYRAPENNR-W-SG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPLD 81 (155)
T ss_dssp CEEEEEEEEEEE-TTTTEEEEEEEC------C-CE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEEECT
T ss_pred CcEEEEEEEEEE-CCCCeEEEEEEECCCCC-C-CC-EeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEeeccC
Confidence 445677777777 455 8888877654 3 35 99999999999999999999999999999988888876554321
Q ss_pred eeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 182 KRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 182 ~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
.+.+....+|.+....+.+.. .+..+..|+++.
T Consensus 82 ------~~~~~~~~~~~~~~~~~~~~~---~e~~~~~W~~~~ 114 (155)
T 2b06_A 82 ------TGGRYIVICYKATEFSGTLQS---SEEGEVSWVQKD 114 (155)
T ss_dssp ------TSCEEEEEEEEECEEEECCCC---BTTBEEEEEEGG
T ss_pred ------CCceEEEEEEEEEecCCCCCC---CcceeeEEeeHH
Confidence 234567788888876555443 334566666654
No 45
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.66 E-value=6.4e-16 Score=122.92 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=67.1
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYV 187 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (225)
.+.+++++++.++++||++|+ .|.|.+|||++++||++.+||+||++||||+++.....++... +
T Consensus 15 ~~~~~~~ii~~~~~vLL~~r~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~---------~ 79 (163)
T 3f13_A 15 LARRATAIIEMPDGVLVTASR------GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHI---------T 79 (163)
T ss_dssp CEEEEEEECEETTEEEEEECC---------BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEE---------C
T ss_pred ceEEEEEEEEeCCEEEEEEEC------CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEe---------c
Confidence 345555566667899999886 3789999999999999999999999999999998776654321 1
Q ss_pred CCccEEEEEEEEEeeCCeeeecCCceeeeEEE
Q 027305 188 ESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFE 219 (225)
Q Consensus 188 ~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~ 219 (225)
. .....+|.+. ..|.+...+......||.
T Consensus 80 ~--~~~~~~f~~~-~~~~~~~~~E~~~~~W~~ 108 (163)
T 3f13_A 80 P--FNAHKVYLCI-AQGQPKPQNEIERIALVS 108 (163)
T ss_dssp S--SEEEEEEEEE-C-CCCCCCTTCCEEEEES
T ss_pred C--CeEEEEEEEE-ECCcCccCCCceEEEEEC
Confidence 1 1566778886 467777665445556664
No 46
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.65 E-value=3.5e-15 Score=121.57 Aligned_cols=114 Identities=19% Similarity=0.225 Sum_probs=70.8
Q ss_pred cceeEEEEEEEeCCc-eEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCc-cccee--EEEEEEEEee
Q 027305 106 SHRVGVGAFVMNGKR-EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSID-TEFVE--VLAFRYVIFL 181 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~-~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~-~~~~~--~l~~~~~~~~ 181 (225)
...+++++++++.++ +|||++++. .|.|.+|||++++||++.+||+||++||||++ +.... ..........
T Consensus 43 ~~h~~~~~vv~~~~~~~vLL~~r~~-----~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 117 (197)
T 3fcm_A 43 IAHLTSSAFAVNKERNKFLMIHHNI-----YNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVN 117 (197)
T ss_dssp SEEEEEEEEEECTTSCEEEEEEETT-----TTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEEEEEecC-----CCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeec
Confidence 345677778888765 999999873 47999999999999999999999999999998 33211 1111111111
Q ss_pred ee---eeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 182 KR---IFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 182 ~~---~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
.. ....+.......+|.+....+.+...+..|..++.|+++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e 163 (197)
T 3fcm_A 118 GHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNE 163 (197)
T ss_dssp CEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGG
T ss_pred CccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHH
Confidence 00 00001112234667777666655455567788888888754
No 47
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.65 E-value=4.7e-16 Score=125.84 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=77.6
Q ss_pred eEEEEEEEeCCceEEEEEeecCCCCCCCcEEE-eeEEcCCCCCHHHHHHHHHHHHhCCcccce-eEEEEEEEEeeeeeee
Q 027305 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKF-PTGVVDEGEDICVAAVREVKEETSIDTEFV-EVLAFRYVIFLKRIFY 186 (225)
Q Consensus 109 ~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~l-PgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~l~~~~~~~~~~~~~ 186 (225)
.++++++++.++++||++|.......+|.|.+ |||.+++||++++||+||++||||+++... ..++...+......
T Consensus 33 ~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~-- 110 (190)
T 1hzt_A 33 LAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPS-- 110 (190)
T ss_dssp ECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTT--
T ss_pred EEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCC--
Confidence 46777888888999999987543323589999 999999999999999999999999999876 55544322111000
Q ss_pred eCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 187 VESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
....+....+|.+.. .+.+.. +..|..+..|+++.
T Consensus 111 ~~~~~~~~~~f~~~~-~~~~~~-~~~E~~~~~W~~~~ 145 (190)
T 1hzt_A 111 GIVENEVCPVFAART-TSALQI-NDDEVMDYQWCDLA 145 (190)
T ss_dssp SCEEEEECCEEEEEB-CSCCCC-CTTTEEEEEEECHH
T ss_pred CCcceEEEEEEEEec-CCCCcC-CccceeeEEEecHH
Confidence 001244567777774 454433 45677778887764
No 48
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.65 E-value=2.7e-15 Score=119.04 Aligned_cols=112 Identities=19% Similarity=0.145 Sum_probs=77.8
Q ss_pred cceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEe--eee
Q 027305 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIF--LKR 183 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~--~~~ 183 (225)
..+.++++++++.++++||++|.. .+.|.+|||++++||++.+||+||++||||+++....+++.....+ ...
T Consensus 6 ~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~ 80 (164)
T 2kdv_A 6 GYRPNVGIVICNRQGQVMWARRFG-----QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP 80 (164)
T ss_dssp SEEEEEEEEEECTTSEEEEEEETT-----CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECC
T ss_pred CCCcEEEEEEEccCCEEEEEEEcC-----CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecC
Confidence 356678888898889999998863 4789999999999999999999999999999998888777653211 100
Q ss_pred eee-----e-CCccEEEEEEEEEeeCCeee--e--cCCceeeeEEEEec
Q 027305 184 IFY-----V-ESKPLLFIIFQFEVYTSLPV--C--HCGQAMMQRFEVLI 222 (225)
Q Consensus 184 ~~~-----~-~~~~~~~~~f~~~~~~g~~~--~--~e~~e~~~~f~v~~ 222 (225)
... . .......++|.+....+... . .+..|..++-|+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~ 129 (164)
T 2kdv_A 81 KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSY 129 (164)
T ss_dssp TTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEET
T ss_pred cceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecH
Confidence 000 0 01223567888886554322 1 13346666666654
No 49
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.65 E-value=1.6e-15 Score=130.12 Aligned_cols=112 Identities=18% Similarity=0.125 Sum_probs=82.4
Q ss_pred CCCCCCCcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEE
Q 027305 99 NTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYV 178 (225)
Q Consensus 99 ~~~p~~~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~ 178 (225)
|....++....++.++ ++.+++|||++|...+ .|.|.+|||++|+|||+++||+||++||||+++....+++...+
T Consensus 131 C~~~~yp~~~~~viv~-v~~~~~vLL~rr~~~~---~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~ 206 (269)
T 1vk6_A 131 CRERYYPQIAPCIIVA-IRRDDSILLAQHTRHR---NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPW 206 (269)
T ss_dssp SSCEECCCCEEEEEEE-EEETTEEEEEEETTTC---SSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEE
T ss_pred CCCEecCCCCcEEEEE-EEeCCEEEEEEecCCC---CCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEec
Confidence 4444555555555544 4456899999987654 48999999999999999999999999999999988877776543
Q ss_pred EeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 179 IFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
.+ .+..+.+|.++...+.+.. +..|..+..|+++..
T Consensus 207 ~~---------~~~~~~~f~a~~~~~~~~~-~~~E~~~~~W~~~~e 242 (269)
T 1vk6_A 207 PF---------PQSLMTAFMAEYDSGDIVI-DPKELLEANWYRYDD 242 (269)
T ss_dssp ET---------TEEEEEEEEEEEEECCCCC-CTTTEEEEEEEETTS
T ss_pred CC---------CCEEEEEEEEEECCCCcCC-CCcceEEEEEEEHHH
Confidence 22 1346778888877666543 455677777777653
No 50
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.63 E-value=7.8e-16 Score=122.06 Aligned_cols=109 Identities=14% Similarity=0.149 Sum_probs=75.5
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEE-EeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWK-FPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~-lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
..++++++++.++++||++|.......+|.|. +|||++++||++.+||+||++||||+.+....+....... + +.
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~-~---~~ 109 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFS-P---FQ 109 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEEC-S---SS
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEe-c---cC
Confidence 45677788888899999998654322358998 9999999999999999999999999998875433332221 0 11
Q ss_pred eCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 187 VESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
..... ..++|.+.. .+.+.. +..+..+..|+++.
T Consensus 110 ~~~~~-~~~~f~~~~-~~~~~~-~~~E~~~~~W~~~~ 143 (171)
T 1q27_A 110 TTLSS-FMCVYELRS-DATPIF-NPNDISGGEWLTPE 143 (171)
T ss_dssp SCCSS-EEEEEEEEC-CCCCCS-CTTTCSCCEEECHH
T ss_pred CCCcc-EEEEEEEEE-CCcccc-CchhhheEEEecHH
Confidence 12223 667888877 555433 34555666666653
No 51
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.63 E-value=1.7e-15 Score=124.99 Aligned_cols=110 Identities=14% Similarity=0.039 Sum_probs=73.5
Q ss_pred eeEEEEEEEe-CCceEEEEEeecCCCC----CCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeee
Q 027305 108 RVGVGAFVMN-GKREVLVVQENSGRFR----GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLK 182 (225)
Q Consensus 108 ~~~v~~~v~~-~~~~vLl~~r~~~~~~----~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~ 182 (225)
..+|++++++ .++++||+++.+.+.. +.+.|++|||.+|+||++++||+||++||||+.+.....++.. +..
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~---~~~ 133 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSF---LAS 133 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEE---ESC
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEE---ecC
Confidence 3577777888 5789999876554321 1478999999999999999999999999999999877777653 111
Q ss_pred eeeeeCCccEEEEEEEEEeeC----CeeeecCCceeeeEEEEeccc
Q 027305 183 RIFYVESKPLLFIIFQFEVYT----SLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 183 ~~~~~~~~~~~~~~f~~~~~~----g~~~~~e~~e~~~~f~v~~~~ 224 (225)
. .......++|.+.... +.....+..|..+..++++..
T Consensus 134 ~----g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~e 175 (209)
T 1g0s_A 134 P----GGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQ 175 (209)
T ss_dssp T----TTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHH
T ss_pred C----CccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHH
Confidence 1 1223456777777422 211223455667788887653
No 52
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.62 E-value=1.3e-15 Score=119.08 Aligned_cols=95 Identities=15% Similarity=0.279 Sum_probs=71.2
Q ss_pred ceeEEEEEEEeC---CceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHH-HHHHHHHHHHhC-CcccceeEEEEEEEEee
Q 027305 107 HRVGVGAFVMNG---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDIC-VAAVREVKEETS-IDTEFVEVLAFRYVIFL 181 (225)
Q Consensus 107 ~~~~v~~~v~~~---~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~-~aa~REl~EEtG-l~~~~~~~l~~~~~~~~ 181 (225)
.+..++++|.+. ++++||++|...+.+ .|.|+||||.+++||++. +||+||++|||| +.+.....++...+
T Consensus 18 ~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~-~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~--- 93 (155)
T 1x51_A 18 EESSATCVLEQPGALGAQILLVQRPNSGLL-AGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVH--- 93 (155)
T ss_dssp EEEEEEEEEEEECSSSEEEEEEECCCCSTT-CSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCC---
T ss_pred eEEEEEEEEEecCCCCCEEEEEECCCCCCC-CceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEE---
Confidence 444555566664 589999998876555 499999999999999996 999999999999 88776665554322
Q ss_pred eeeeeeCCccEEEEEEEEEeeCCeeeec
Q 027305 182 KRIFYVESKPLLFIIFQFEVYTSLPVCH 209 (225)
Q Consensus 182 ~~~~~~~~~~~~~~~f~~~~~~g~~~~~ 209 (225)
.+++.+..+.+|.++...+.+...
T Consensus 94 ----~~~~~~~~~~~~~~~~~~~~~~~~ 117 (155)
T 1x51_A 94 ----TFSHIKLTYQVYGLALEGQTPVTT 117 (155)
T ss_dssp ----BCSSCEEEEEEEEEECSSCCCCCC
T ss_pred ----ecCCccEEEEEEEEEEcCCCCCCC
Confidence 234566777889988776655433
No 53
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.61 E-value=3.1e-15 Score=131.75 Aligned_cols=118 Identities=19% Similarity=0.196 Sum_probs=79.6
Q ss_pred CCCCCcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEE--EEE
Q 027305 101 LPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAF--RYV 178 (225)
Q Consensus 101 ~p~~~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~--~~~ 178 (225)
...++...++++++++ .+++|||++|...+ +.|.|.+|||++++||++++||+||++||||+++....+++. ...
T Consensus 201 ~~~~~~~~~~v~~vv~-~~~~vLL~~r~~~~--~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~ 277 (352)
T 2qjt_B 201 KAPFKPNFVTVDALVI-VNDHILMVQRKAHP--GKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEK 277 (352)
T ss_dssp SSSSCCEEEEEEEEEE-ETTEEEEEEESSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEE
T ss_pred ccCCCCCceEEEEEEE-ECCEEEEEEEcCCC--CCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeE
Confidence 3345556677877777 46899999998654 358999999999999999999999999999999875433210 111
Q ss_pred EeeeeeeeeCCccEEEEEEEEEeeCCe--eeecCCceeeeEEEEec
Q 027305 179 IFLKRIFYVESKPLLFIIFQFEVYTSL--PVCHCGQAMMQRFEVLI 222 (225)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~f~~~~~~g~--~~~~e~~e~~~~f~v~~ 222 (225)
.+.... .....+...++|.+....+. +...+..|..+..|+++
T Consensus 278 ~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~ 322 (352)
T 2qjt_B 278 VFDYPD-RSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISL 322 (352)
T ss_dssp EECCTT-SCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEES
T ss_pred EecCCC-CCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecH
Confidence 111110 01122356677888776665 33344567777777776
No 54
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.61 E-value=4.8e-17 Score=139.76 Aligned_cols=130 Identities=17% Similarity=0.175 Sum_probs=79.3
Q ss_pred eeeccCCceEEEEEeeCCCCCCCCC---CCcceeEEEEEEEeC-CceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHH
Q 027305 79 WFHHAEPNYLMLVYWIPGGANTLPA---NASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVA 154 (225)
Q Consensus 79 ~~h~~~~~~~~l~~~l~~~~~~~p~---~~~~~~~v~~~v~~~-~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~a 154 (225)
.|||+. ++.+|++.....++. +.....++++++++. +++|||++|.+. ++.|.+|||++++||++++|
T Consensus 73 ~f~~~~----~l~~~~~~~~~~~~~~~~~~~~v~~v~avv~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEs~~eA 144 (271)
T 2a6t_A 73 LFAHCP----LLWKWSKVHEEAFDDFLRYKTRIPVRGAIMLDMSMQQCVLVKGWKA----SSGWGFPKGKIDKDESDVDC 144 (271)
T ss_dssp HHTTCH----HHHHC---CCHHHHHHHHHSCCCCEEEEEEBCSSSSEEEEEEESST----TCCCBCSEEECCTTCCHHHH
T ss_pred Hhhhhh----hhhcccccchhHHHHHHhcCCCCCeEEEEEEECCCCEEEEEEEeCC----CCeEECCcccCCCCcCHHHH
Confidence 788886 445666544333332 222334567777775 489999998753 37899999999999999999
Q ss_pred HHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeCCccEEEEEEEEEeeCC--eeeecCCceeeeEEEEeccc
Q 027305 155 AVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVESKPLLFIIFQFEVYTS--LPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 155 a~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g--~~~~~e~~e~~~~f~v~~~~ 224 (225)
|+||++||||+++.....+. .+... ... ....++|.+..... ...+.+..|..++.|+++..
T Consensus 145 A~REl~EEtGl~~~~l~~~~----~~~~~--~~~--~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~e 208 (271)
T 2a6t_A 145 AIREVYEETGFDCSSRINPN----EFIDM--TIR--GQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMD 208 (271)
T ss_dssp HHHHHHHHHCCCCTTTCCTT----CEEEE--EET--TEEEEEEEECCCCTTCCCC------EEEEEEEEGGG
T ss_pred HHHHHHHHhCCCceeeeeee----eeccC--CcC--CceEEEEEEEEecCcccCCCCCccceeEEEEEEHHH
Confidence 99999999999987633211 11111 111 22456666664432 22334566788888887754
No 55
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.61 E-value=1.6e-15 Score=127.88 Aligned_cols=111 Identities=16% Similarity=0.148 Sum_probs=76.2
Q ss_pred CCcceeEEEEEEE---eCCceEEEEEeecCCCCCCCcEEEeeEEcCC--CCCHHHHHHHHHHHHhCCcccceeEEEEEEE
Q 027305 104 NASHRVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDE--GEDICVAAVREVKEETSIDTEFVEVLAFRYV 178 (225)
Q Consensus 104 ~~~~~~~v~~~v~---~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~--gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~ 178 (225)
+..+.++|+++|+ +.+++|||++|...+ ..|.|.+|||++++ ||++++||+||++||||+++.....++....
T Consensus 18 ~~~p~v~v~~vi~~~~~~~~~vLLv~R~~~~--~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~ 95 (240)
T 3gz5_A 18 FKAQLLTVDAVLFTYHDQQLKVLLVQRSNHP--FLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGN 95 (240)
T ss_dssp ---CEEEEEEEEEEEETTEEEEEEEECCSSS--STTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEEE
T ss_pred cCCCccEEEEEEEEEeCCCcEEEEEECcCCC--CCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEeCC
Confidence 3445677777777 345799999998644 35899999999999 9999999999999999999988777766543
Q ss_pred EeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEec
Q 027305 179 IFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLI 222 (225)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~ 222 (225)
.. ..+..+....+|.+....+.... ...+..+..|+++
T Consensus 96 ~~-----r~~~~~~~~~~y~a~~~~~~~~~-~~~e~~~~~W~~~ 133 (240)
T 3gz5_A 96 NS-----RDARGWSVTVCYTALMSYQACQI-QIASVSDVKWWPL 133 (240)
T ss_dssp SS-----SSTTSCEEEEEEEEECCHHHHHH-HHTTCTTEEEEEH
T ss_pred Cc-----cCCCceEEEEEEEEEecccccCC-CCCcccceEEecH
Confidence 21 12344567778877765444331 2233334444443
No 56
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.60 E-value=1.9e-15 Score=132.36 Aligned_cols=116 Identities=17% Similarity=0.208 Sum_probs=75.8
Q ss_pred CCcceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEE--EEEee
Q 027305 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR--YVIFL 181 (225)
Q Consensus 104 ~~~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~--~~~~~ 181 (225)
++...+++++++++ +++|||++|...+ +.|.|.+|||++++||++++||+||++||||+++....+++.. ...+.
T Consensus 199 ~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 275 (341)
T 2qjo_A 199 YAPTFITTDAVVVQ-AGHVLMVRRQAKP--GLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFD 275 (341)
T ss_dssp SCCCEEEEEEEEEE-TTEEEEEECCSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEEC
T ss_pred CCCCceEEEEEEEe-CCEEEEEEecCCC--CCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEe
Confidence 44556777777775 6899999997643 2589999999999999999999999999999998865544311 11111
Q ss_pred eeeeeeCCccEEEEEEEEEeeCCee-eecCCceeeeEEEEecc
Q 027305 182 KRIFYVESKPLLFIIFQFEVYTSLP-VCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 182 ~~~~~~~~~~~~~~~f~~~~~~g~~-~~~e~~e~~~~f~v~~~ 223 (225)
... .....+...++|.+....+.. ...++.|..+..|+++.
T Consensus 276 ~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~ 317 (341)
T 2qjo_A 276 APG-RSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLA 317 (341)
T ss_dssp CTT-SCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHH
T ss_pred CCC-CCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHH
Confidence 110 111234567788888766552 33455677777777654
No 57
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.60 E-value=3.3e-15 Score=124.48 Aligned_cols=123 Identities=15% Similarity=0.068 Sum_probs=73.5
Q ss_pred CCCCCCCCCCCcceeEEEEEEEe-CCceEEEEEeecCCCC------------------------------CCCcEEEeeE
Q 027305 95 PGGANTLPANASHRVGVGAFVMN-GKREVLVVQENSGRFR------------------------------GTGIWKFPTG 143 (225)
Q Consensus 95 ~~~~~~~p~~~~~~~~v~~~v~~-~~~~vLl~~r~~~~~~------------------------------~~~~w~lPgG 143 (225)
+++............+|++++++ .++++||+++.+.+.. .++.|+||||
T Consensus 23 ~~G~~~~~e~v~~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG 102 (218)
T 3q91_A 23 MNGAQKSWDFMKTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAG 102 (218)
T ss_dssp ------------CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEE
T ss_pred CCCCEEEEEEEEcCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcc
Confidence 44443333333445678888888 4578999876543211 0479999999
Q ss_pred EcCC-CCCHHHHHHHHHHHHhCCcc--cceeEEEEEEEEeeeeeeeeCCccEEEEEEEEEeeCCe-----eeecCCceee
Q 027305 144 VVDE-GEDICVAAVREVKEETSIDT--EFVEVLAFRYVIFLKRIFYVESKPLLFIIFQFEVYTSL-----PVCHCGQAMM 215 (225)
Q Consensus 144 ~ve~-gE~~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~-----~~~~e~~e~~ 215 (225)
.+|+ ||++++||+||++||||+.+ .....++..... . .......++|.+...... ....+..|..
T Consensus 103 ~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~---~----g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ 175 (218)
T 3q91_A 103 LVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSG---V----GLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELI 175 (218)
T ss_dssp ECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC----------CCEEEEEEEEEECGGGBCC---------CCE
T ss_pred eeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecC---C----CccceEEEEEEEEECCcccccCCCCCCCCCcEE
Confidence 9999 99999999999999999998 556666543211 1 122345677777754221 1234456788
Q ss_pred eEEEEeccc
Q 027305 216 QRFEVLIAF 224 (225)
Q Consensus 216 ~~f~v~~~~ 224 (225)
+..++++.+
T Consensus 176 ev~wv~l~e 184 (218)
T 3q91_A 176 EVVHLPLEG 184 (218)
T ss_dssp EEEEEEGGG
T ss_pred EEEEEEHHH
Confidence 888988764
No 58
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.60 E-value=1.4e-14 Score=124.34 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=77.3
Q ss_pred CCCCCCcceeEEEEEEEe--C---CceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEE
Q 027305 100 TLPANASHRVGVGAFVMN--G---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLA 174 (225)
Q Consensus 100 ~~p~~~~~~~~v~~~v~~--~---~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~ 174 (225)
.++.+..+.++|+++|+. . +++|||++|...+ ..|.|.+|||++++||++++||+||++||||+++....+..
T Consensus 31 ~~~~~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p--~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~ 108 (273)
T 2fml_A 31 ELPEYEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHP--FRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQ 108 (273)
T ss_dssp CCCCCCCCEEEEEEEEEEEETTTTEEEEEEEEECSSS--STTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEE
T ss_pred hcccCCCCceEEEEEEEEEcCCCCCcEEEEEEccCCC--CCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEE
Confidence 344566677888887775 2 3589999998754 25899999999999999999999999999998765443332
Q ss_pred EEEEEeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 175 FRYVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
....... ...+..+....+|.+....+. ...+.+..+..|+++.
T Consensus 109 l~~~~~~---~r~~~~~~~~~~y~a~~~~~~--~~~~~E~~~~~W~~~~ 152 (273)
T 2fml_A 109 LHSFSRP---DRDPRGWVVTVSYLAFIGEEP--LIAGDDAKEVHWFNLE 152 (273)
T ss_dssp EEEECCT---TSSTTSSEEEEEEEEECCCCC--CCCCTTEEEEEEEEEE
T ss_pred EEEEcCC---CCCCCceEEEEEEEEEeCCCC--CCCCcceeeEEEEEhh
Confidence 2221111 111223567788888765443 2334455555555543
No 59
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.60 E-value=1.2e-15 Score=123.22 Aligned_cols=109 Identities=18% Similarity=0.089 Sum_probs=70.4
Q ss_pred eEEEEEEEe--C-----CceEEEEEeecC-----CCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEE
Q 027305 109 VGVGAFVMN--G-----KREVLVVQENSG-----RFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (225)
Q Consensus 109 ~~v~~~v~~--~-----~~~vLl~~r~~~-----~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~ 176 (225)
++|+++|+. . +++|||++|... .....|.|.+|||++++||++.+||+||++||||+++....+++..
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~ 107 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPFGVF 107 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEEEEEE
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEEEEEE
Confidence 556655554 2 368999999431 1113689999999999999999999999999999999888888764
Q ss_pred EEEeeeeeeeeCCccEEEEEEEEEeeCCee-eecCCceeeeEEEEec
Q 027305 177 YVIFLKRIFYVESKPLLFIIFQFEVYTSLP-VCHCGQAMMQRFEVLI 222 (225)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~-~~~e~~e~~~~f~v~~ 222 (225)
.... .....+....+|.+....+.. ......|..+..|+++
T Consensus 108 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~ 149 (187)
T 3i9x_A 108 DKPG-----RDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPM 149 (187)
T ss_dssp CCTT-----SSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEH
T ss_pred cCCc-----cCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeH
Confidence 3211 112334455566555432221 1223344455556554
No 60
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.59 E-value=1.6e-15 Score=118.69 Aligned_cols=59 Identities=34% Similarity=0.597 Sum_probs=51.8
Q ss_pred cceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCccc
Q 027305 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTE 168 (225)
Q Consensus 106 ~~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~ 168 (225)
..+.++++++++.+++|||++|... +|.|.+|||++++||++++||+||++||||+++.
T Consensus 12 ~~~~~v~~~i~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~ 70 (165)
T 1f3y_A 12 GYRRNVGICLMNNDKKIFAASRLDI----PDAWQMPQGGIDEGEDPRNAAIRELREETGVTSA 70 (165)
T ss_dssp SCCCEEEEEEECTTSCEEEEEETTE----EEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSE
T ss_pred ceeeeEEEEEECCCCcEEEEecCCC----CCcEECCeeccCCCCCHHHHHHHHHHHhhCCChh
Confidence 3466788888998899999998742 3899999999999999999999999999999874
No 61
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.58 E-value=4.9e-15 Score=120.47 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=73.7
Q ss_pred eEEEEEEEeC-CceEEEEEeecCCC-----CCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeee
Q 027305 109 VGVGAFVMNG-KREVLVVQENSGRF-----RGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLK 182 (225)
Q Consensus 109 ~~v~~~v~~~-~~~vLl~~r~~~~~-----~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~ 182 (225)
.+|++++++. ++++||+++.+.+. .+.+.|+||||+++ ||++++||+||++||||+++.....++.... .
T Consensus 46 ~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~---~ 121 (191)
T 3o6z_A 46 NGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYM---S 121 (191)
T ss_dssp CEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEES---C
T ss_pred CEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEe---C
Confidence 4677777774 58999998765321 02578999999999 9999999999999999999987777765321 1
Q ss_pred eeeeeCCccEEEEEEEEEeeCCee----eecCCceeeeEEEEeccc
Q 027305 183 RIFYVESKPLLFIIFQFEVYTSLP----VCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 183 ~~~~~~~~~~~~~~f~~~~~~g~~----~~~e~~e~~~~f~v~~~~ 224 (225)
........++|.+....... ... ..|..+..++++.+
T Consensus 122 ----~~~~~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~e 162 (191)
T 3o6z_A 122 ----PGGVTELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQ 162 (191)
T ss_dssp ----TTTBCCEEEEEEEECCTTCC---------CCSSEEEEEEHHH
T ss_pred ----CCccCcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHH
Confidence 11234456788888654321 112 56777888888753
No 62
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.58 E-value=7.6e-15 Score=119.89 Aligned_cols=67 Identities=25% Similarity=0.386 Sum_probs=54.9
Q ss_pred ceeEEEEEEE--eCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEE
Q 027305 107 HRVGVGAFVM--NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRY 177 (225)
Q Consensus 107 ~~~~v~~~v~--~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~ 177 (225)
....++++++ +.+++|||++|.+. ++.|.+|||++++||++++||+||++||||+++....+++...
T Consensus 39 ~~~~~~~vi~~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~ 107 (194)
T 2fvv_A 39 YKKRAACLCFRSESEEEVLLVSSSRH----PDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFE 107 (194)
T ss_dssp CEEEEEEEEESSTTCCEEEEEECSSC----TTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEE
T ss_pred ccccEEEEEEEECCCCEEEEEEEeCC----CCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEEE
Confidence 3455666666 34689999998753 3789999999999999999999999999999988777776554
No 63
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.4e-15 Score=115.13 Aligned_cols=56 Identities=32% Similarity=0.518 Sum_probs=48.2
Q ss_pred EEEEEEEeCC-ceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccce
Q 027305 110 GVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFV 170 (225)
Q Consensus 110 ~v~~~v~~~~-~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 170 (225)
.+++++++.+ ++|||++|.. .|.|.+|||++++||++.+||+||++||||+++...
T Consensus 6 ~~~~~i~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~ 62 (146)
T 2jvb_A 6 VRGAAIFNENLSKILLVQGTE-----SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDY 62 (146)
T ss_dssp CEEEEEBCTTSSEEEEECCSS-----SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSS
T ss_pred EEEEEEEeCCCCEEEEEEEcC-----CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHh
Confidence 4566777765 8999998763 489999999999999999999999999999988643
No 64
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.55 E-value=6.2e-15 Score=115.51 Aligned_cols=59 Identities=27% Similarity=0.426 Sum_probs=50.7
Q ss_pred eEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEE
Q 027305 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL 173 (225)
Q Consensus 109 ~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l 173 (225)
+.+++++++ ++++||++|+. .|.|.+|||++++||++.+||+||++||||+++.....+
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~ 60 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFT 60 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCC
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccce
Confidence 456777787 78999999864 478999999999999999999999999999988765543
No 65
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.55 E-value=6.8e-15 Score=121.69 Aligned_cols=101 Identities=18% Similarity=0.086 Sum_probs=74.9
Q ss_pred EEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCC-CHHHHHHHHHHHHhCCccccee-----EEEEEEEEeeee
Q 027305 110 GVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSIDTEFVE-----VLAFRYVIFLKR 183 (225)
Q Consensus 110 ~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~-----~l~~~~~~~~~~ 183 (225)
++.+++++.++++||++|. .|.|+||||++++|| ++++||+||++||||+.+.... .++...+.
T Consensus 46 ~vv~~i~~~~~~vLl~~r~------~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~---- 115 (212)
T 1u20_A 46 AKLFDRVPIRRVLLMMMRF------DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVRE---- 115 (212)
T ss_dssp CEETTTEECCEEEEEEEET------TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEEC----
T ss_pred eEEEEEEecCCEEEEEEeC------CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEecccc----
Confidence 3444456777899998872 489999999999999 9999999999999999987654 34433221
Q ss_pred eeeeCCccEEEEEEEEEeeCCeeee---------cCCceeeeEEEEeccc
Q 027305 184 IFYVESKPLLFIIFQFEVYTSLPVC---------HCGQAMMQRFEVLIAF 224 (225)
Q Consensus 184 ~~~~~~~~~~~~~f~~~~~~g~~~~---------~e~~e~~~~f~v~~~~ 224 (225)
++ .+...++|.+....+.+.. .++.+..+.+|+++..
T Consensus 116 ---~~-~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~e 161 (212)
T 1u20_A 116 ---HP-QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYT 161 (212)
T ss_dssp ---TT-SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSB
T ss_pred ---CC-CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHH
Confidence 22 4677889999877665432 2456778889998864
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.54 E-value=1.9e-14 Score=118.74 Aligned_cols=97 Identities=18% Similarity=0.202 Sum_probs=64.5
Q ss_pred ceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeeeeCCccEEEEEEEE
Q 027305 120 REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFYVESKPLLFIIFQF 199 (225)
Q Consensus 120 ~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~ 199 (225)
+++||+++.+.+. +++.|+||||.+|+||++++||+||++||||+.+....+++.. +... .+ .....++|.+
T Consensus 77 ~~vlLv~q~R~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~---~~~~--~~--~~~~~~~~~a 148 (212)
T 2dsc_A 77 ECIVLVKQFRPPM-GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAV---CMDP--GL--SNCTIHIVTV 148 (212)
T ss_dssp CEEEEEEEEEGGG-TEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCE---ESCT--TT--BCCEEEEEEE
T ss_pred cEEEEEEeecCCC-CCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccE---EcCC--Cc--cCceEEEEEE
Confidence 4798887654332 3478999999999999999999999999999998766555432 1111 11 1223455555
Q ss_pred EeeC--Ce----eeecCCceeeeEEEEeccc
Q 027305 200 EVYT--SL----PVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 200 ~~~~--g~----~~~~e~~e~~~~f~v~~~~ 224 (225)
.... +. ....+..|..+..|+++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~e 179 (212)
T 2dsc_A 149 TINGDDAENARPKPKPGDGEFVEVISLPKND 179 (212)
T ss_dssp EEETTSGGGSSCCCCCCTTCCCEEEEEEGGG
T ss_pred EEeCccccccCCCCCCCCCceEEEEEEEHHH
Confidence 5321 11 1233566788899998764
No 67
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.53 E-value=1.3e-14 Score=120.19 Aligned_cols=98 Identities=19% Similarity=0.089 Sum_probs=63.6
Q ss_pred eEEEEEEEeCCceEEEEEeecCCC--CCCCcEEE-eeEEcCCCCC--H----HHHHHHHHHHHhCCcccceeEEEEEEEE
Q 027305 109 VGVGAFVMNGKREVLVVQENSGRF--RGTGIWKF-PTGVVDEGED--I----CVAAVREVKEETSIDTEFVEVLAFRYVI 179 (225)
Q Consensus 109 ~~v~~~v~~~~~~vLl~~r~~~~~--~~~~~w~l-PgG~ve~gE~--~----~~aa~REl~EEtGl~~~~~~~l~~~~~~ 179 (225)
..+.++++..++++|+++|..++. .-.|.|.+ |||+|++||+ + ++||+||++||||+++....+++.....
T Consensus 68 q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~~ 147 (211)
T 3e57_A 68 QVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSS 147 (211)
T ss_dssp EEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECC
T ss_pred ceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEecc
Confidence 334445555679999999976531 01378999 9999999998 4 9999999999999998877777766432
Q ss_pred eeeeeeeeCCccEEEEEEEEEeeCCeeeecCC
Q 027305 180 FLKRIFYVESKPLLFIIFQFEVYTSLPVCHCG 211 (225)
Q Consensus 180 ~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~ 211 (225)
.. .. .......+|.|+...+.+...+.
T Consensus 148 ~~----~~-~~~~l~~~f~~~~~~g~~~~~E~ 174 (211)
T 3e57_A 148 TT----EV-SRVHLGALFLGRGKFFSVKEKDL 174 (211)
T ss_dssp SS----HH-HHTEEEEEEEEEEEEEEESCTTT
T ss_pred CC----CC-CeEEEEEEEEEEeCCceeCCCCe
Confidence 11 11 11233457889988776654443
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.50 E-value=6.5e-14 Score=125.04 Aligned_cols=89 Identities=17% Similarity=0.199 Sum_probs=71.8
Q ss_pred ceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee
Q 027305 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY 186 (225)
Q Consensus 107 ~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (225)
....+++++.+.+++|||+||...+.++ |.|+||||.+++| ++++|++||++||||+++.....++...+.+
T Consensus 239 ~~~~~~~vi~~~~g~vLL~rR~~~g~~~-GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~------ 310 (369)
T 3fsp_A 239 QVPLAVAVLADDEGRVLIRKRDSTGLLA-NLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAF------ 310 (369)
T ss_dssp EEEEEEEEEECSSSEEEEEECCSSSTTT-TCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEEC------
T ss_pred eEEEEEEEEEeCCCEEEEEECCCCCCcC-CcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEc------
Confidence 3445566677788999999998776664 9999999999999 9999999999999999988777676655443
Q ss_pred eCCccEEEEEEEEEeeCC
Q 027305 187 VESKPLLFIIFQFEVYTS 204 (225)
Q Consensus 187 ~~~~~~~~~~f~~~~~~g 204 (225)
++.+..+.+|.++...+
T Consensus 311 -~h~~~~~~~~~~~~~~~ 327 (369)
T 3fsp_A 311 -SHLVWQLTVFPGRLVHG 327 (369)
T ss_dssp -SSEEEEEEEEEEEECCS
T ss_pred -ceEEEEEEEEEEEEcCC
Confidence 46677888998887544
No 69
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.47 E-value=1.5e-13 Score=122.14 Aligned_cols=101 Identities=18% Similarity=0.113 Sum_probs=67.7
Q ss_pred CCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcccceeEEEEEEEEeeeeeee------eCCcc
Q 027305 118 GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRYVIFLKRIFY------VESKP 191 (225)
Q Consensus 118 ~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~------~~~~~ 191 (225)
++.+|||++|+. .+.|.||||++++||++++||+||++||||+++....+++...+.+...... .....
T Consensus 36 ~~~~vLLv~r~~-----~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~ 110 (364)
T 3fjy_A 36 DSIEVCIVHRPK-----YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADT 110 (364)
T ss_dssp TTEEEEEEEETT-----TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC--------------------
T ss_pred CceEEEEEEcCC-----CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCc
Confidence 445899999853 4899999999999999999999999999999998888777654433311100 00124
Q ss_pred EEEEEEEEEeeCCee----------e-ecCCceeeeEEEEecc
Q 027305 192 LLFIIFQFEVYTSLP----------V-CHCGQAMMQRFEVLIA 223 (225)
Q Consensus 192 ~~~~~f~~~~~~g~~----------~-~~e~~e~~~~f~v~~~ 223 (225)
....+|.+....+.. . ..+..|..+..|+++.
T Consensus 111 ~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~ 153 (364)
T 3fjy_A 111 KHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVR 153 (364)
T ss_dssp -CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHH
T ss_pred eEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHH
Confidence 556778887766531 1 2344677777787764
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.42 E-value=1.8e-12 Score=108.96 Aligned_cols=112 Identities=14% Similarity=0.038 Sum_probs=75.6
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEee-EEcCCC------CC---HHHHHHHHHHHHhCCcccc-----eeE
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPT-GVVDEG------ED---ICVAAVREVKEETSIDTEF-----VEV 172 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPg-G~ve~g------E~---~~~aa~REl~EEtGl~~~~-----~~~ 172 (225)
..++.+++++.+|++||+||.......+|.|.+|+ |++++| |+ +.+||+||++||||+.+.. ...
T Consensus 59 h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~ 138 (235)
T 2dho_A 59 HRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINY 138 (235)
T ss_dssp EEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEE
T ss_pred EEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEE
Confidence 35677788888899999998765544468999994 999999 88 5999999999999998752 355
Q ss_pred EEEEEEEeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 173 LAFRYVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
++...+...... . -..+....+|.+.. .+.+.+ ...|..+..++++.
T Consensus 139 l~~~~y~~~~~~-~-~~~~e~~~vf~~~~-~~~~~~-~~~Ev~~~~wv~~~ 185 (235)
T 2dho_A 139 LTRIHYKAQSDG-I-WGEHEIDYILLVRM-NVTLNP-DPNEIKSYCYVSKE 185 (235)
T ss_dssp EEEEEEEEECSS-S-BEEEEEEEEEEEEC-CCCCCC-CTTTEEEEEEECHH
T ss_pred EEEEEEeccCCC-c-cceeEEEEEEEEEE-CCCCcC-ChHHEEEEEEEcHH
Confidence 555433221100 0 01133456777764 344433 45677888887764
No 71
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.39 E-value=2.4e-12 Score=108.93 Aligned_cols=112 Identities=11% Similarity=-0.001 Sum_probs=75.6
Q ss_pred eeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEee-EEcCCC------CCH---HHHHHHHHHHHhCCcccc-----eeE
Q 027305 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPT-GVVDEG------EDI---CVAAVREVKEETSIDTEF-----VEV 172 (225)
Q Consensus 108 ~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPg-G~ve~g------E~~---~~aa~REl~EEtGl~~~~-----~~~ 172 (225)
..++.+++++.++++||+||.......+|.|.+|+ |++++| |++ .+||+||++||||+.+.. ...
T Consensus 70 h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~ 149 (246)
T 2pny_A 70 HRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVF 149 (246)
T ss_dssp EEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEE
T ss_pred EEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEE
Confidence 34677788888899999998765544468999995 999999 887 999999999999998752 345
Q ss_pred EEEEEEEeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEecc
Q 027305 173 LAFRYVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~ 223 (225)
++...+...... . -..+....+|.+.. .+.+.+ ...|..+..++++.
T Consensus 150 l~~~~y~~~~~~-~-~~~~e~~~vf~~~~-~~~~~~-~~~Ev~~~~wv~~e 196 (246)
T 2pny_A 150 MTIYHHKAKSDR-I-WGEHEICYLLLVRK-NVTLNP-DPSETKSILYLSQE 196 (246)
T ss_dssp EEEEEEEEESSS-S-BEEEEEEEEEEEEC-CCCCCC-CTTTEEEEEEECHH
T ss_pred EEEEEEEecCCC-c-eeeeEEEEEEEEEE-CCCCCC-ChHHeeEEEEEeHH
Confidence 554432221100 0 01133456676664 344433 45677888887764
No 72
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.38 E-value=1e-11 Score=107.93 Aligned_cols=179 Identities=12% Similarity=0.098 Sum_probs=108.7
Q ss_pred CcEEEecCCCCChHHHHHHHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCceEEEEEeeCCCCCCCCC
Q 027305 24 GGVVVQMNEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPA 103 (225)
Q Consensus 24 ~gv~i~~~~~~~~~~f~~~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~~~l~~~l~~~~~~~p~ 103 (225)
++|++... ..+.++=.+.+...++.|++.+.=.-| .-++.++....| ..-...+ + ....+.
T Consensus 53 ~~v~l~~~-~~~~~~rt~~~~~~~~~~~~~g~~~gw------r~E~~~V~~~~~------~~~~~~~----e--R~~~~~ 113 (300)
T 3dup_A 53 DAVLLSAS-LRTPQSRTRAVADVVDRLADEGVVPAP------RGELYRVNQSWG------EPTLMLL----D--RAVVPT 113 (300)
T ss_dssp SEEEECTT-CCSHHHHHHHHHHHHHHHHHTTSSCCC------CSCEEEECSSTT------SCCCEEE----E--GGGTGG
T ss_pred CEEEEecC-CCCHHHHHHHHHHHHHHHHHcCCCCcc------ccccEEeecCCC------CeeeEEE----E--hhhccc
Confidence 34544432 356677788899889999998732112 112222111110 0111222 1 112223
Q ss_pred CCcceeEEEEEEEeCCc---eEEEEEeecCCCCCCCcE-EEeeEEcCCCCCHHHHHHHHHHHHhCCcccc---eeEEEEE
Q 027305 104 NASHRVGVGAFVMNGKR---EVLVVQENSGRFRGTGIW-KFPTGVVDEGEDICVAAVREVKEETSIDTEF---VEVLAFR 176 (225)
Q Consensus 104 ~~~~~~~v~~~v~~~~~---~vLl~~r~~~~~~~~~~w-~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~---~~~l~~~ 176 (225)
......+|-+.+++.++ ++||.||.......+|.| .+++|++++||++.+||+||+.||+|+.+.. ...++..
T Consensus 114 ~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i 193 (300)
T 3dup_A 114 FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAI 193 (300)
T ss_dssp GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEE
T ss_pred cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceE
Confidence 33445567777777766 899999987766668999 5899999999999999999999999998753 2334443
Q ss_pred EEEeeeeeeeeCCccEEEEEEEEEeeCCeeeecCCceeeeEEEEeccc
Q 027305 177 YVIFLKRIFYVESKPLLFIIFQFEVYTSLPVCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~~e~~e~~~~f~v~~~~ 224 (225)
.+.+.... + -.+...++|.+....+........|..++.++++.+
T Consensus 194 ~y~~~~~~-G--~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~E 238 (300)
T 3dup_A 194 TYCMESPA-G--IKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAK 238 (300)
T ss_dssp EEEEEETT-E--EEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHH
T ss_pred EEEEecCC-C--eEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHH
Confidence 33222111 1 123455677766654433334567889999988754
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.38 E-value=5.2e-13 Score=110.99 Aligned_cols=92 Identities=15% Similarity=0.145 Sum_probs=63.8
Q ss_pred eEEEEEeecCCCCCCCcEEEeeEEcCCCC-CHHHHHHHHHHHHhCCccccee--EEEEEEEEeeeeeeeeCCccEEEEEE
Q 027305 121 EVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSIDTEFVE--VLAFRYVIFLKRIFYVESKPLLFIIF 197 (225)
Q Consensus 121 ~vLl~~r~~~~~~~~~~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~f 197 (225)
++|+.+|. .+.|+||||.+|+|| ++++||+||++||||+.+.... .+...... .....+....+|
T Consensus 66 ~~ll~~r~------~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~------~~~~~~~~~~~f 133 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSH------VGSGPRVVAHFY 133 (217)
T ss_dssp EEEEEEET------TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEE------ECSSSSEEEEEE
T ss_pred cEEEEEcc------CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeec------CCCCCeEEEEEE
Confidence 56666554 378999999999999 9999999999999999887421 11111110 011236677888
Q ss_pred EEEeeCCee---------eecCCceeeeEEEEeccc
Q 027305 198 QFEVYTSLP---------VCHCGQAMMQRFEVLIAF 224 (225)
Q Consensus 198 ~~~~~~g~~---------~~~e~~e~~~~f~v~~~~ 224 (225)
.+....+.+ ...++.|..+.++|++..
T Consensus 134 ~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~ 169 (217)
T 2xsq_A 134 AKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYT 169 (217)
T ss_dssp EEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSB
T ss_pred EEEeccccceecccccccccccCCceeeEEEEEHHH
Confidence 888765544 133456888999998865
No 74
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.31 E-value=1.2e-12 Score=106.05 Aligned_cols=89 Identities=13% Similarity=0.100 Sum_probs=66.0
Q ss_pred eEEEEEeecCCCCCCCcEEEeeEEcCCCC-CHHHHHHHHHHHHhCC-cccceeEEEEEEEEeeeeeeeeCCccEEEEEEE
Q 027305 121 EVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSI-DTEFVEVLAFRYVIFLKRIFYVESKPLLFIIFQ 198 (225)
Q Consensus 121 ~vLl~~r~~~~~~~~~~w~lPgG~ve~gE-~~~~aa~REl~EEtGl-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~ 198 (225)
.+|++.|. .|.|+||||+||+|| |+++|+.||+.||+|+ .+.....+....+. ++ .++..++|.
T Consensus 45 ~iLmQ~R~------~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~-------yp-~~V~LHfY~ 110 (214)
T 3kvh_A 45 SVLMQMRF------DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTE-------GP-HRVVAHLYA 110 (214)
T ss_dssp EEEEEEET------TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC------------CEEEEEEE
T ss_pred eEEEeeee------CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEecc-------CC-CEEEEEEEE
Confidence 35666654 489999999999999 9999999999999996 56666666544332 22 478899999
Q ss_pred EEeeCCeeee---------cCCceeeeEEEEecc
Q 027305 199 FEVYTSLPVC---------HCGQAMMQRFEVLIA 223 (225)
Q Consensus 199 ~~~~~g~~~~---------~e~~e~~~~f~v~~~ 223 (225)
|+.+.|++.. +.|.|....+-|||-
T Consensus 111 crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPly 144 (214)
T 3kvh_A 111 RQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLY 144 (214)
T ss_dssp EECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCC
T ss_pred EEeeCCccchhhhcccCCcccCceecceEEeeeE
Confidence 9999887653 456788888888763
No 75
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.23 E-value=4.2e-11 Score=103.67 Aligned_cols=42 Identities=31% Similarity=0.576 Sum_probs=38.5
Q ss_pred eEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhCCcc
Q 027305 121 EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT 167 (225)
Q Consensus 121 ~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~ 167 (225)
+|||++|.. .|.|.+|||++++||++.+||+||++||||+.+
T Consensus 140 ~vLl~~r~~-----~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIPGGMVDPGEKISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEECTT-----TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGG
T ss_pred EEEEEEecC-----CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCcc
Confidence 699999874 378999999999999999999999999999983
No 76
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.23 E-value=4.3e-11 Score=100.43 Aligned_cols=112 Identities=19% Similarity=0.136 Sum_probs=76.4
Q ss_pred ceeEEEEEEEeC--C--ceEEEEEeecCCCCCCCcEEEeeEEcCCCCC--------------------HHHHHHHHHHHH
Q 027305 107 HRVGVGAFVMNG--K--REVLVVQENSGRFRGTGIWKFPTGVVDEGED--------------------ICVAAVREVKEE 162 (225)
Q Consensus 107 ~~~~v~~~v~~~--~--~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~--------------------~~~aa~REl~EE 162 (225)
.+.++.++++++ + .+|||.||.......+|.|.||||.||+||+ +..||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 345666666653 2 3899999987654346999999999999987 589999999999
Q ss_pred hCCccccee----------------------------------------EEEEEEEEeeeeeeeeCCccEEEEEEEEEee
Q 027305 163 TSIDTEFVE----------------------------------------VLAFRYVIFLKRIFYVESKPLLFIIFQFEVY 202 (225)
Q Consensus 163 tGl~~~~~~----------------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 202 (225)
||+.+.... +.-...+. ++. ...++....+|.+...
T Consensus 87 ~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWi--TP~--~~~rRfdT~FFla~lp 162 (232)
T 3qsj_A 87 IGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFV--TPP--TQPVRFDTRFFLCVGQ 162 (232)
T ss_dssp HSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEE--CCT--TSSSEEEEEEEEEECS
T ss_pred hCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEc--CCc--CCceeEEEEEEEEECC
Confidence 999764211 11111111 111 1346788889988876
Q ss_pred CCee-eecCCceeeeEEEEecc
Q 027305 203 TSLP-VCHCGQAMMQRFEVLIA 223 (225)
Q Consensus 203 ~g~~-~~~e~~e~~~~f~v~~~ 223 (225)
..+ ...++.|..+..|+...
T Consensus 163 -q~~~v~~d~~E~~~~~W~~p~ 183 (232)
T 3qsj_A 163 -HLGEPRLHGAELDAALWTPAR 183 (232)
T ss_dssp -SCCCCCCCSSSEEEEEEEEHH
T ss_pred -CCCCCCCCCCceEEEEEEcHH
Confidence 333 24577888888888764
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.08 E-value=6.7e-10 Score=90.79 Aligned_cols=62 Identities=26% Similarity=0.332 Sum_probs=46.6
Q ss_pred eeEEEEEE-EeCCc--eEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHhC------CcccceeEEEE
Q 027305 108 RVGVGAFV-MNGKR--EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETS------IDTEFVEVLAF 175 (225)
Q Consensus 108 ~~~v~~~v-~~~~~--~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEtG------l~~~~~~~l~~ 175 (225)
+..|.+++ ++.++ +|||+|+. .+.|.||||.+++||++++|++||+.||+| .+.+..+.+|.
T Consensus 58 R~sV~avil~~~~~~phVLLlq~~------~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~ 128 (208)
T 3bho_A 58 RRTVEGVLIVHEHRLPHVLLLQLG------TTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 128 (208)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEE------TTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEE
T ss_pred ceEEEEEEEEcCCCCcEEEEEEcC------CCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEE
Confidence 34454444 44444 79999975 368999999999999999999999999999 44455566665
No 78
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.87 E-value=5.4e-09 Score=91.54 Aligned_cols=79 Identities=11% Similarity=0.167 Sum_probs=57.1
Q ss_pred ceeEEEEEEEeCCceEEEEEeecCCCCCCCcEEEeeEEcCCCCCHHHHHHHHHHHHh-CCcccceeEEEEEEEEeeeeee
Q 027305 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEET-SIDTEFVEVLAFRYVIFLKRIF 185 (225)
Q Consensus 107 ~~~~v~~~v~~~~~~vLl~~r~~~~~~~~~~w~lPgG~ve~gE~~~~aa~REl~EEt-Gl~~~~~~~l~~~~~~~~~~~~ 185 (225)
+.+.|++++.+ +++|||+ . ..| |.||||.++.+++ ++|+||++||| |++++...+++....
T Consensus 182 p~~~vgaii~~-~g~vLL~--~-----~~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~~L~~v~~~------- 243 (321)
T 3rh7_A 182 GEIRLGAVLEQ-QGAVFLA--G-----NET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIGFLYSVYED------- 243 (321)
T ss_dssp SCEEEEEEEES-SSCEEEB--C-----SSE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEEEEEEEEEC-------
T ss_pred CcceEEEEEEE-CCEEEEe--e-----CCC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeeceEEEEEEc-------
Confidence 34556655554 6899999 2 247 9999986655444 59999999997 999998887776532
Q ss_pred eeCCccEEEEEEEEEeeCCe
Q 027305 186 YVESKPLLFIIFQFEVYTSL 205 (225)
Q Consensus 186 ~~~~~~~~~~~f~~~~~~g~ 205 (225)
...+....+|.|+...|.
T Consensus 244 --~~~~~~~i~f~~~~~~g~ 261 (321)
T 3rh7_A 244 --KSDGRQNIVYHALASDGA 261 (321)
T ss_dssp --TTTCCEEEEEEEEECSSC
T ss_pred --CCCceEEEEEEEEeCCCC
Confidence 123345679999988775
No 79
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=37.79 E-value=88 Score=22.55 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCceEEE
Q 027305 40 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLML 90 (225)
Q Consensus 40 ~~~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~~~l 90 (225)
...|+..+...++.+.+.+++.+...+........+.||.......+...|
T Consensus 129 ~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~~~~~~m 179 (183)
T 3fix_A 129 KTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDTDGSDFIM 179 (183)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSEEEE
T ss_pred HHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEecccccchhh
Confidence 334455555566778889999998888878888889999886655544443
No 80
>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1
Probab=34.70 E-value=90 Score=22.18 Aligned_cols=50 Identities=8% Similarity=-0.029 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCceEEEEEe
Q 027305 43 LKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYW 93 (225)
Q Consensus 43 l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~~~l~~~ 93 (225)
|+..++..++.+ +.+++.+...+...+....+.||........|..+.+.
T Consensus 107 l~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~GF~~~~~~~~~~~m~~~ 156 (159)
T 1wwz_A 107 LITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKR 156 (159)
T ss_dssp HHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTTCEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCCCEEccccccHHHHHHh
Confidence 344444456667 88888887777777777778899876666666665443
No 81
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=30.71 E-value=1.3e+02 Score=21.12 Aligned_cols=52 Identities=10% Similarity=0.001 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCceEEEEEe
Q 027305 42 LLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYW 93 (225)
Q Consensus 42 ~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~~~l~~~ 93 (225)
.|+..+...++.+.+.+++.+...+........+.||.......++..+.+-
T Consensus 124 ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~ek~ 175 (179)
T 2oh1_A 124 MIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKKNGFYLYQKE 175 (179)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEEecccCChhhhhhh
Confidence 3444445556678888988888777777777788899876554455444443
No 82
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=26.52 E-value=1.6e+02 Score=23.94 Aligned_cols=54 Identities=7% Similarity=0.038 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCceEEEEEeeC
Q 027305 42 LLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIP 95 (225)
Q Consensus 42 ~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~~~l~~~l~ 95 (225)
.++..+...++.+.+.+++.+...+........+.||......+++..+..-++
T Consensus 253 ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~l~ 306 (333)
T 4ava_A 253 LIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVP 306 (333)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCEECSTTEEEEEEECC
T ss_pred HHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCceeccCCCEEEEEEecC
Confidence 344445555677889999999999888888888999998776677776655544
No 83
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=23.64 E-value=1.8e+02 Score=19.92 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeecc
Q 027305 41 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHA 83 (225)
Q Consensus 41 ~~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~ 83 (225)
..|...+...+..+.+.+++.+...+........+.||.....
T Consensus 94 ~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~ 136 (162)
T 3lod_A 94 KLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCA 136 (162)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEccc
Confidence 3444445555667888999888888877888888889976543
No 84
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=22.44 E-value=2e+02 Score=19.98 Aligned_cols=48 Identities=6% Similarity=-0.065 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCceEE
Q 027305 42 LLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLM 89 (225)
Q Consensus 42 ~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~~~ 89 (225)
.+...+...+..+.+.+++.+...+...+....+.||.......++..
T Consensus 111 ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~ 158 (164)
T 3eo4_A 111 SVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFKKTKKGRENEW 158 (164)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEECSTTEE
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEeeechhhh
Confidence 344444444677889999999988888888888999988766666544
No 85
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=21.95 E-value=1.5e+02 Score=20.66 Aligned_cols=45 Identities=18% Similarity=0.047 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCc
Q 027305 42 LLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPN 86 (225)
Q Consensus 42 ~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~ 86 (225)
.|+..+...++.+.+.+++.+...+...+....+.||.......+
T Consensus 102 ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~ 146 (169)
T 3g8w_A 102 LINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKN 146 (169)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcCCEEeeeecC
Confidence 344445555667889999999888888888888889976544333
No 86
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=20.40 E-value=1.8e+02 Score=19.51 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHcCcceEEEEcccccccchHHHHhcCceeeccCCceEE
Q 027305 41 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLM 89 (225)
Q Consensus 41 ~~l~~~~~~w~~~~~~~iw~~~~~~~~~~~~~~~~~gf~~h~~~~~~~~ 89 (225)
..+...+...++.+.+.+++.+...+........+.||........|..
T Consensus 98 ~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~~ 146 (153)
T 2eui_A 98 HLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQEFKNYTL 146 (153)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCSBCCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCEEecccEEEEe
Confidence 3344445555667788899888888777777778889976554444433
Done!