BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027306
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana
GN=RPL6 PE=1 SV=1
Length = 223
Score = 356 bits (913), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/226 (76%), Positives = 198/226 (87%), Gaps = 4/226 (1%)
Query: 1 MASSIASSFHTSNLKSIFFGERNGFSMSNVPVNRVGFSRKTIECKESRIGKQPIEVPSNV 60
MASS+ SSF +S F G+RN F +S+ P +VG+S KTIECKESRIGKQPI VPSNV
Sbjct: 1 MASSLVSSFQP---RSAFLGDRNVFKVSSTPFAQVGYSSKTIECKESRIGKQPIAVPSNV 57
Query: 61 TITLGGQDLKVKGPLGELSLVYPREVKVDREDS-FLRVRKTVETRRANQMHGLFRTLTDN 119
TI L GQDLKVKGPLGEL+L YPREV++ +E+S FLRV+KTVETRRANQMHGLFRTLTDN
Sbjct: 58 TIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDN 117
Query: 120 MVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVS 179
MVVGVSKGFEKKL +VGVGYRA ++G+ LVL+LGFSHPV+M IPD +KV VEENTRITVS
Sbjct: 118 MVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVS 177
Query: 180 GYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKKK 225
GYDKS IGQFAA++RKWRPPEPYKGKGVKY DE++RRKEGKAGKKK
Sbjct: 178 GYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRRKEGKAGKKK 223
>sp|B1WQS5|RL6_CYAA5 50S ribosomal protein L6 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplF PE=3 SV=1
Length = 179
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 128/178 (71%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P+ VTI + GQ + VKGP G L L P EV V++E + V++ ++R A
Sbjct: 2 SRIGKKPIPLPNKVTIDIKGQHIAVKGPKGSLELDLPSEVTVNQEGETVEVQRVDDSRTA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGLFRTL NM+ GVS+GFEK+L + GVGYRA +G L L++G+S PV MT+P GI
Sbjct: 62 RERHGLFRTLVANMIQGVSQGFEKRLNIQGVGYRAQAQGSKLTLNVGYSKPVEMTMPQGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
V VE NT++ VSG DK +G AA IR RPPEPYKGKG++Y DE +RRK GKAGKK
Sbjct: 122 NVAVENNTQVVVSGIDKEIVGNIAAKIRGVRPPEPYKGKGIRYQDEYVRRKAGKAGKK 179
>sp|B7KI01|RL6_CYAP7 50S ribosomal protein L6 OS=Cyanothece sp. (strain PCC 7424)
GN=rplF PE=3 SV=1
Length = 179
Score = 199 bits (507), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 127/178 (71%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P+ VT+ + G + VKGP GEL P V V++++ LRV + ++R A
Sbjct: 2 SRIGKRPITIPNKVTVNIDGSHVAVKGPKGELQRTLPTLVIVEQDEGVLRVVRQDDSRTA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q HGL RTL NMV GVSKGFEK+L++ GVGYRAA +G L L++G+S PV M +P GI
Sbjct: 62 RQRHGLCRTLVSNMVEGVSKGFEKRLEIQGVGYRAAAQGSKLTLNVGYSKPVEMDMPSGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
V VE+NT IT++G DK +G AA IR RPPEPYKGKG++Y EV+RRK GK GKK
Sbjct: 122 GVAVEKNTEITITGIDKEIVGNVAAKIRAVRPPEPYKGKGIRYKGEVVRRKAGKTGKK 179
>sp|B0C1E7|RL6_ACAM1 50S ribosomal protein L6 OS=Acaryochloris marina (strain MBIC
11017) GN=rplF PE=3 SV=1
Length = 179
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 129/178 (72%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK PI +P V +T+ GQ + VKGP GELS EV +++ D+ + V + E+R A
Sbjct: 2 SRIGKVPIPIPDKVNVTIKGQAVTVKGPKGELSREITPEVAIEQADNLVTVTRRNESRIA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q HGL RTL NMV GVSKGFEKKLQ+ GVGYRA ++G+ L+L++G+S+PV + P+G+
Sbjct: 62 RQRHGLSRTLIANMVEGVSKGFEKKLQIQGVGYRAQVQGRNLILNVGYSNPVTIEPPEGV 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
+V VE NT + VSG +K +G AA IR RPPEPYKGKG++Y DE +RRK GKAGKK
Sbjct: 122 QVAVESNTNVIVSGINKEVVGNTAARIRAVRPPEPYKGKGIRYADEYVRRKVGKAGKK 179
>sp|Q3SSV1|RL6_NITWN 50S ribosomal protein L6 OS=Nitrobacter winogradskyi (strain Nb-255
/ ATCC 25391) GN=rplF PE=3 SV=1
Length = 177
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 125/174 (71%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+P+ VPS VT T+ GQ +K+KGP GEL V +V+V ED ++V ET+RA
Sbjct: 2 SRIGKRPVTVPSGVTATVEGQTVKMKGPKGELRFVVHDDVEVKLEDGAVKVAPRYETKRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL+++GVGYRAAL+G+ L L+LG+SH V +P+GI
Sbjct: 62 QALYGTARAQVANLVAGVTKGFEKKLEIIGVGYRAALQGKSLQLALGYSHDVNYAVPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T IT++G D +GQ AA IR +RPPEPYKGKGVKY DE I RKEGK
Sbjct: 122 TIAVPKPTEITITGNDAQRVGQVAAEIRGYRPPEPYKGKGVKYADETIFRKEGK 175
>sp|Q110C1|RL6_TRIEI 50S ribosomal protein L6 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplF PE=3 SV=1
Length = 179
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 128/178 (71%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK PI +P VTIT+ GQ + VKGPLGELS V P E+ V +++ + V+ ++RRA
Sbjct: 2 SRIGKLPIPIPKKVTITIEGQKVTVKGPLGELSRVLPPEIAVKEQENTIIVKPQEQSRRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q +GL RTL NMV GVSKG+EK+L + GVGYRA ++G+ LVL++G+S PV M P+GI
Sbjct: 62 RQRYGLCRTLVANMVEGVSKGYEKRLVIQGVGYRAQVQGKTLVLNVGYSKPVEMPAPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
+ VE NT + V+G +K +G AA IR RPPE YKGKGV+Y EVI+ K GK+GKK
Sbjct: 122 NIAVENNTNVIVNGINKELVGNTAAKIRAVRPPEVYKGKGVRYAGEVIKLKAGKSGKK 179
>sp|Q8DML8|RL6_THEEB 50S ribosomal protein L6 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplF PE=3 SV=1
Length = 187
Score = 194 bits (494), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 132/186 (70%), Gaps = 8/186 (4%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P NVT+TL GQ + VKGP G+LS V+P EV V +E + V++ ++R A
Sbjct: 2 SRIGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVFPPEVNVVQEGEAIVVKRRDDSRPA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NMV GVS+GF KKL++ GVGYRA L+G+ LVLS+G+SHPV + P+GI
Sbjct: 62 KERHGLCRTLLANMVEGVSQGFTKKLEIQGVGYRAQLQGKTLVLSMGYSHPVEIVPPEGI 121
Query: 167 KVNVEEN--------TRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKE 218
+ +E+N T + VSG DK +G +A IR RPPEPYKGKG++Y+ E +RRK
Sbjct: 122 TLEIEDNQGKKVQQGTIVLVSGIDKELVGNTSARIRAVRPPEPYKGKGIRYMGEFVRRKV 181
Query: 219 GKAGKK 224
GK GKK
Sbjct: 182 GKTGKK 187
>sp|A6TWG7|RL6_ALKMQ 50S ribosomal protein L6 OS=Alkaliphilus metalliredigens (strain
QYMF) GN=rplF PE=3 SV=1
Length = 179
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDL-KVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRR 105
SRIG +PIEVP V IT+ +++ VKGP G+LS R++ V+ E + + V + E ++
Sbjct: 2 SRIGLKPIEVPQGVEITVDEKNIVTVKGPNGQLSEKIHRDITVETEANVINVVRPTENKK 61
Query: 106 ANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDG 165
+HGL RTL NMV GV+KG+EKKL++VGVGYRA ++G+ LVLSLGFSHPV + P+G
Sbjct: 62 HKSLHGLSRTLVANMVEGVTKGYEKKLELVGVGYRATMQGKKLVLSLGFSHPVEIDQPEG 121
Query: 166 IKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGK 223
+ + V T++TV G DK +G FAA IR++R PEPYKGKGV+Y EV+RRKEGK GK
Sbjct: 122 LTIEVPSQTQVTVKGIDKQQVGNFAAKIREYRKPEPYKGKGVRYAGEVVRRKEGKTGK 179
>sp|Q18CH5|RL6_CLOD6 50S ribosomal protein L6 OS=Clostridium difficile (strain 630)
GN=rplF PE=3 SV=1
Length = 180
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 125/179 (69%), Gaps = 1/179 (0%)
Query: 47 SRIGKQPIEVPSNVTITLG-GQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRR 105
SRIG +PI +P+ V +T+ G + VKGP G L+ E+ + +E++ + V + + ++
Sbjct: 2 SRIGVKPIIIPAGVEVTIAEGNLVTVKGPKGTLTKQLSAELNIKKEENTIMVERPTDNKK 61
Query: 106 ANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDG 165
+HGL RTL DNMVVGV+ GFEKKL++ GVGYRA +G+ LV++LGFSHPV M P+G
Sbjct: 62 HRSLHGLTRTLLDNMVVGVNTGFEKKLELKGVGYRAQKQGKKLVMNLGFSHPVEMEDPEG 121
Query: 166 IKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
I V T + V G DK +G +AA IR WR PEPYKGKG+KYVDEVIRRKEGK GKK
Sbjct: 122 ITVEAPNQTELIVKGIDKQLVGNYAAKIRAWRKPEPYKGKGIKYVDEVIRRKEGKTGKK 180
>sp|Q1QN15|RL6_NITHX 50S ribosomal protein L6 OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=rplF PE=3 SV=1
Length = 177
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 124/174 (71%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+P+ VPS VT T+ GQ +++KGP G+L V +V+V E+ ++V ET RA
Sbjct: 2 SRIGKRPVTVPSGVTATVEGQTVRMKGPKGQLEFVVHNDVEVKLENGAVKVAPRYETNRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++VGVGYRAAL+G+ L L+LG+SH V IP+GI
Sbjct: 62 QALYGTARAQVANLVAGVTKGFEKKLEIVGVGYRAALQGKTLQLALGYSHDVSYAIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T IT++G D +GQ AA IR +RPPEPYKGKGVKY DE I RKEGK
Sbjct: 122 TIAVPKPTEITIAGNDAQRVGQVAAEIRGYRPPEPYKGKGVKYADEFIFRKEGK 175
>sp|B7K234|RL6_CYAP8 50S ribosomal protein L6 OS=Cyanothece sp. (strain PCC 8801)
GN=rplF PE=3 SV=1
Length = 179
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 125/178 (70%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P+ VTI + GQ + VKGP G L P +V V +E+ L V++ ++R A
Sbjct: 2 SRIGKRPIPIPNKVTIDIQGQHVAVKGPKGSLERTLPDKVNVVQENDTLLVQREDDSRTA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NMV GVSKGFEK+L + GVGYRA ++G L L++G+S PV MT+P GI
Sbjct: 62 RERHGLTRTLVANMVEGVSKGFEKRLSIQGVGYRAQVQGTKLTLNVGYSKPVEMTMPAGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
+V VE NT + VSG DK +G +A IR RPPE YKGKG++Y DE +RRK GK GKK
Sbjct: 122 QVAVENNTLVIVSGIDKEIVGNVSAEIRAVRPPEVYKGKGIRYSDEFVRRKAGKTGKK 179
>sp|A5GIT1|RL6_SYNPW 50S ribosomal protein L6 OS=Synechococcus sp. (strain WH7803)
GN=rplF PE=3 SV=1
Length = 179
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK PI +P V+++L G + VKGP GEL P V V++ D+ + V T E R++
Sbjct: 2 SRIGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPDGVTVNQVDNTIVVAPTSEKRQS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NM+ GVSKG+ KKL++VGVG RA ++G+ LV+S G+SHPV M P+GI
Sbjct: 62 RERHGLCRTLVANMIEGVSKGYSKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEMLAPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY E I RK GK+GKK
Sbjct: 122 TFAVENNTNVTVSGTDKELVGNEAAKIRAIRPPEPYKGKGIKYAGERILRKAGKSGKK 179
>sp|A5GVX4|RL6_SYNR3 50S ribosomal protein L6 OS=Synechococcus sp. (strain RCC307)
GN=rplF PE=3 SV=1
Length = 179
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 123/178 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK P+ +P V++ + G +KVKGP GEL V P V V + D+ + V + +RR+
Sbjct: 2 SRIGKNPVPIPEKVSVEISGLTVKVKGPKGELERVLPDGVSVSQADNAVTVSPSDTSRRS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NMV GVSKGF KKL+++GVGYRA ++G+ LV+S G+SHPV M P+G+
Sbjct: 62 RERHGLCRTLVANMVEGVSKGFSKKLEIIGVGYRAQVKGKKLVVSAGYSHPVEMDAPEGV 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA +R RPPEPYKGKG+KY E I RK GK GKK
Sbjct: 122 TFAVENNTLVTVSGADKELVGNEAAKVRGIRPPEPYKGKGIKYQGERILRKAGKTGKK 179
>sp|P49548|RK6_ODOSI 50S ribosomal protein L6, chloroplastic OS=Odontella sinensis
GN=rpl6 PE=3 SV=1
Length = 179
Score = 191 bits (484), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 121/178 (67%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK PI++P+NV IT G DL VKG G L P + ++ D L V TR
Sbjct: 2 SRIGKLPIKIPANVDITCSGPDLTVKGKFGTLHNTIPDAIGIEEIDGSLIVNVKDNTRSN 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+HGL+RTL +NMV GVS+ F+ L + GVGYRA+++G ++L+LG+SHPV + IP+GI
Sbjct: 62 RALHGLYRTLINNMVTGVSEQFQLTLNLQGVGYRASVQGNSIILNLGYSHPVELVIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
V V +NT I + DK +G FA++IR WRPPEPYKGKG+ Y E+++RK GK+GKK
Sbjct: 122 SVEVVQNTTINLKACDKGNLGLFASNIRSWRPPEPYKGKGILYKGEIVKRKAGKSGKK 179
>sp|Q7UZV8|RL6_PROMP 50S ribosomal protein L6 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rplF PE=3 SV=1
Length = 179
Score = 190 bits (483), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 124/178 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK P+++P V++ + G + VKGP GEL + P V D++++ + V R +
Sbjct: 2 SRIGKSPVQIPEKVSVDIKGLSITVKGPKGELKRLMPEGVNFDQKENQIVVTPATTKRYS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NMV GV++G+EKKL++VGVG RA ++G+ LV+S G+SHPV MT PDGI
Sbjct: 62 RERHGLCRTLISNMVQGVTEGYEKKLEIVGVGSRAQVKGKNLVVSAGYSHPVEMTPPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY DE I RK GK+GKK
Sbjct: 122 TYKVESNTNVTVSGIDKEIVGNEAAKIRSIRPPEPYKGKGIKYQDERIIRKAGKSGKK 179
>sp|B2UQM5|RL6_AKKM8 50S ribosomal protein L6 OS=Akkermansia muciniphila (strain ATCC
BAA-835) GN=rplF PE=3 SV=1
Length = 179
Score = 190 bits (482), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 127/175 (72%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+GK+ I +P VT+ + G ++V+GP G+LS P + E + L V + E+R+
Sbjct: 2 SRVGKKSITLPDKVTVKVNGSSVQVEGPKGKLSWTLPEGITATVEGNQLSVDRAGESRQL 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+HG R+L +NMV+GVS+GF K L++VGVG+RAA++G +L L+LG SHP+ IP+G+
Sbjct: 62 RALHGTNRSLLNNMVIGVSEGFVKNLEIVGVGFRAAVKGNILDLNLGKSHPINQVIPEGL 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKA 221
KV V ENT++TV G DK +GQFAA +R + PPEPYKGKGV++V EVIRRKEGK+
Sbjct: 122 KVTVTENTKVTVEGIDKQVVGQFAAEVRAYYPPEPYKGKGVRFVGEVIRRKEGKS 176
>sp|Q0ID19|RL6_SYNS3 50S ribosomal protein L6 OS=Synechococcus sp. (strain CC9311)
GN=rplF PE=3 SV=1
Length = 179
Score = 190 bits (482), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 121/178 (67%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK PI +P V +TL G + VKGP GEL P V V++ D+ + V T R +
Sbjct: 2 SRIGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPSGVSVNQVDNSIVVAPTSTKRSS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NMV+GVS+G+ KKL++VGVG RA ++G+ LV+S G+SHPV + P+GI
Sbjct: 62 RERHGLCRTLVANMVIGVSQGYSKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEVVPPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY E I RK GK+GKK
Sbjct: 122 TFTVENNTNVTVSGTDKELVGNEAAKIRAIRPPEPYKGKGIKYAGERILRKAGKSGKK 179
>sp|Q3MFA7|RL6_ANAVT 50S ribosomal protein L6 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplF PE=3 SV=1
Length = 182
Score = 188 bits (477), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 123/170 (72%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI VP+ V +T+ G + VKGP GELS P V V +E L+V + ETR +
Sbjct: 2 SRIGKRPITVPAKVQVTIDGTKVVVKGPKGELSRELPVNVSVSQEGETLQVTRRDETRTS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q+HGL RTL NMV GVS+GF+++L++ GVGYRA ++G+ L+L++G+SH V++ PDGI
Sbjct: 62 RQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLILNMGYSHQVQIEPPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 216
+ VE NT + VSGYDK +G AA IR RPPEPYKGKG++Y EV+RR
Sbjct: 122 QFAVENNTNVIVSGYDKEIVGNTAAKIRAVRPPEPYKGKGIRYAGEVVRR 171
>sp|Q89J99|RL6_BRAJA 50S ribosomal protein L6 OS=Bradyrhizobium japonicum (strain USDA
110) GN=rplF PE=3 SV=1
Length = 177
Score = 188 bits (477), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 125/174 (71%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+GK+P+ VPS VT T+ GQ +K+KGP G+L V +V+V E ++V+ +ET RA
Sbjct: 2 SRVGKRPVAVPSGVTATVDGQTVKMKGPKGQLQFVVHDDVEVKLESGQIKVKPRLETNRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V TIP+GI
Sbjct: 62 RALYGTARAQVANLVEGVTKGFEKKLEITGVGYRAAMQGKNLQLALGYSHDVIYTIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T ITV+G D +GQ AA IR +RPPEPYKGKGVKYV E I RKEGK
Sbjct: 122 TITVPKPTEITVTGSDIQRVGQVAAEIRSYRPPEPYKGKGVKYVGEFIFRKEGK 175
>sp|Q8YPJ3|RL6_NOSS1 50S ribosomal protein L6 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplF PE=3 SV=1
Length = 182
Score = 188 bits (477), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 123/170 (72%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI VP+ V +T+ G + VKGP GELS P V V +E L+V + ETR +
Sbjct: 2 SRIGKRPITVPAKVQVTIDGTKVVVKGPKGELSRELPANVSVSQEGETLQVTRRDETRTS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q+HGL RTL NMV GVS+GF+++L++ GVGYRA ++G+ LVL++G+SH V++ PDGI
Sbjct: 62 RQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLVLNMGYSHQVQIEPPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 216
+ VE NT + VSGYDK +G AA +R RPPEPYKGKG++Y EV+RR
Sbjct: 122 QFVVENNTNVIVSGYDKEIVGNTAAKVRAVRPPEPYKGKGIRYAGEVVRR 171
>sp|Q2JQN4|RL6_SYNJA 50S ribosomal protein L6 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplF PE=3 SV=1
Length = 181
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 121/170 (71%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P+ V + + GQ + VKGP GELS P + V +E L+V + E+R A
Sbjct: 2 SRIGKRPIALPAKVEVQIEGQQISVKGPKGELSRSLPPLIAVHQEAQTLKVSRVNESRPA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q+HGL RTL NMV GVS+GFE++L++VGVGYRA+ +G L+L++G+SHPV + P GI
Sbjct: 62 RQLHGLCRTLVANMVDGVSRGFERRLELVGVGYRASTQGNKLILNVGYSHPVEIPFPPGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 216
++ VE N I VSG DK +G AA IR RPPEPYKGKG++YV E +RR
Sbjct: 122 QIAVEGNNVIVVSGIDKELVGNTAARIRAVRPPEPYKGKGIRYVGEQVRR 171
>sp|Q318J8|RL6_PROM9 50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplF PE=3 SV=1
Length = 179
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 120/178 (67%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK P+ +P VT+ L G + VKGP GEL + P V D++D+ + V T +
Sbjct: 2 SRIGKTPVLIPEKVTVDLDGLIVTVKGPKGELKRLMPEGVSFDKKDNTVVVSPTTNKIHS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q HGL R L NMV GV++GF KKL++VGVG RA ++G+ LV+S G+SHPV M PDGI
Sbjct: 62 RQRHGLCRALIANMVEGVTQGFSKKLEIVGVGSRAQVKGKNLVVSAGYSHPVEMIPPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY DE I RK GK+GKK
Sbjct: 122 TYKVESNTNVTVSGIDKEIVGNEAAKIRSIRPPEPYKGKGIKYHDERILRKAGKSGKK 179
>sp|A9BCN3|RL6_PROM4 50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplF PE=3 SV=1
Length = 179
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 120/178 (67%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGKQPI VP V + L G L VKGP GELS P V + + D+ + V R++
Sbjct: 2 SRIGKQPIPVPEKVAVELDGLSLTVKGPKGELSRTLPEGVSISQVDNSIVVSAINSKRKS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL R+L NMV GVSKG+ KKL++VGVG RA ++G+ L++S G+SHPV + PDGI
Sbjct: 62 RERHGLSRSLVANMVEGVSKGYSKKLEIVGVGSRAQVKGKNLIVSAGYSHPVEVIPPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY E I RK GK+GKK
Sbjct: 122 TFVVENNTNVTVSGIDKELVGNEAAKIRAIRPPEPYKGKGIKYAGERIIRKAGKSGKK 179
>sp|B1XJJ3|RL6_SYNP2 50S ribosomal protein L6 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplF PE=3 SV=1
Length = 180
Score = 187 bits (474), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 125/179 (69%), Gaps = 1/179 (0%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P VT+TL G ++ VKGP G L P +V V +ED+ + V +R A
Sbjct: 2 SRIGKKPIPIPDKVTVTLNGANVAVKGPKGSLERTLPEKVTVTQEDNTIVVSPVDNSRTA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NM+ GVS+G+ K+L+++GVGYRA ++G L L++G+S PV M +P+G+
Sbjct: 62 RERHGLCRTLVANMIEGVSQGYSKQLEIIGVGYRAQVQGNKLTLNVGYSKPVEMQMPEGV 121
Query: 167 KVNV-EENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
+ E+NT++ +SG DK +G AA +R RPPEPYKGKG++Y E IRRK GKAGKK
Sbjct: 122 TAAMGEKNTQVIISGIDKEVVGNTAAKVRAVRPPEPYKGKGIRYQGEYIRRKAGKAGKK 180
>sp|P73306|RL6_SYNY3 50S ribosomal protein L6 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplF PE=3 SV=1
Length = 179
Score = 186 bits (473), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 123/178 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P+ V++ + G L VKGP G L P +V V +E + V + E+R A
Sbjct: 2 SRIGKRPIPLPAKVSVDIQGSHLSVKGPKGSLERQLPEKVIVAQEGETITVTRQDESRTA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NMV GV++GFE++L++ GVGYRA +G L L++G+S PV MT+P GI
Sbjct: 62 RERHGLVRTLVANMVDGVAQGFERRLEIQGVGYRAQAQGNKLTLNVGYSKPVEMTMPQGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
+V VE NT++ VSG DK +G AA IR RPPEPYKGKG++Y E +RRK GK GKK
Sbjct: 122 EVKVENNTQVIVSGIDKELLGNTAAKIRAVRPPEPYKGKGIRYQGEYVRRKAGKTGKK 179
>sp|A7HWS6|RL6_PARL1 50S ribosomal protein L6 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplF PE=3 SV=1
Length = 177
Score = 186 bits (473), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 121/174 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK P+EVP VT+TL GQDL VKGP GEL L +V V++ +S L+V +T+RA
Sbjct: 2 SRIGKYPVEVPKGVTVTLNGQDLAVKGPKGELKLTLVDDVTVEQGESGLKVAPREDTQRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
M GL RTL N+V GV+ GF K L++ GVGYRAA++G+ L L+LGFSH V IP+GI
Sbjct: 62 RAMWGLSRTLVKNIVTGVTDGFTKTLEINGVGYRAAIQGKNLQLNLGFSHDVLYPIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ + T I ++G DK +GQ AA IR +R PEPYKGKGVKY E I RKEGK
Sbjct: 122 DIKCTKPTEIVITGIDKQKVGQVAAEIRGYRGPEPYKGKGVKYAGEYIFRKEGK 175
>sp|A4XBN1|RL6_SALTO 50S ribosomal protein L6 OS=Salinispora tropica (strain ATCC
BAA-916 / DSM 44818 / CNB-440) GN=rplF PE=3 SV=1
Length = 180
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 125/179 (69%), Gaps = 1/179 (0%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRR 105
SRIG++ I VP+ V +T+ GQ + VKGP GELS + +DR ED L V + + R+
Sbjct: 2 SRIGRKSIPVPTGVDVTIAGQTVTVKGPKGELSHTIAEPITIDRAEDGQLNVARPNDERK 61
Query: 106 ANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDG 165
A ++HGL RTL NM+VGV++G+ K L++ G GYR +G+ L +LGFSHPV + P+G
Sbjct: 62 AKELHGLSRTLVANMIVGVTEGYRKSLEIAGTGYRVTAKGKDLEFALGFSHPVTVVAPEG 121
Query: 166 IKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
I +VE+ T V+G +K +G+ AA+IRK RPPEPYKGKGVKY EVIRRK GKAGKK
Sbjct: 122 ITFSVEKPTLFHVAGINKQLVGEVAANIRKIRPPEPYKGKGVKYQGEVIRRKAGKAGKK 180
>sp|A0L5Y8|RL6_MAGSM 50S ribosomal protein L6 OS=Magnetococcus sp. (strain MC-1) GN=rplF
PE=3 SV=1
Length = 177
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 122/174 (70%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+P+ VP V + + G + KG LGEL+ + + +E + V + +++
Sbjct: 2 SRIGKKPVVVPDGVDLKINGTVVTAKGKLGELTRQFHEAITFAQEGKEVNVAVSGTDKKS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ + GL RTL DNMVVGVS+GF K+L++ GVGYRAA++G+ L LSLGFSHPV +P+G+
Sbjct: 62 SSLWGLSRTLLDNMVVGVSQGFSKQLEIQGVGYRAAVKGRTLELSLGFSHPVNYELPNGL 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ VE+NT ITV GYDK +GQ A IR WRPPEPYKGKGV+YV E + RKEGK
Sbjct: 122 EATVEKNTLITVKGYDKEVLGQACAEIRSWRPPEPYKGKGVRYVGEFVLRKEGK 175
>sp|A8M514|RL6_SALAI 50S ribosomal protein L6 OS=Salinispora arenicola (strain CNS-205)
GN=rplF PE=3 SV=1
Length = 180
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 1/179 (0%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRR 105
SRIG++ I VP+ V +T+ GQ +KVKGP GELS + V+R ED L V + + R+
Sbjct: 2 SRIGRKSIPVPAGVDVTIDGQTVKVKGPKGELSHTLAEPITVERAEDGQLNVARPNDERK 61
Query: 106 ANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDG 165
A ++HGL RTL NM+VGV++G+ K L++ G GYR +G+ L +LGFSHPV + P+G
Sbjct: 62 AKELHGLSRTLVANMIVGVTEGYRKSLEIAGTGYRVTAKGKDLEFALGFSHPVTVVAPEG 121
Query: 166 IKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
I +VE+ T V+G +K +G+ AA+IRK RPPEPYKGKGVKY EVIRRK GKAGKK
Sbjct: 122 ITFSVEKPTLFHVAGINKQLVGEVAANIRKIRPPEPYKGKGVKYQGEVIRRKAGKAGKK 180
>sp|Q9A8T8|RL6_CAUCR 50S ribosomal protein L6 OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=rplF PE=3 SV=1
Length = 177
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 121/174 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+ + +PS V +TL GQ + VKGP G+LS EV+V +E + L + V+T+RA
Sbjct: 2 SRIGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIADEVEVKQEGAELLLAPRVDTKRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
M GL RTL NMV GV+ GFE+ L++VGVGYRAA++G L L LGFSH V + P G+
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELVGVGYRAAMKGTALSLQLGFSHDVDVAAPAGV 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
V + T I ++G DK A+G+ AA IR+ RPPEPYKGKGV+Y E +RRKEGK
Sbjct: 122 TFAVPKQTEIKIAGIDKQAVGEIAAKIRRIRPPEPYKGKGVRYAGEKVRRKEGK 175
>sp|B8H4E9|RL6_CAUCN 50S ribosomal protein L6 OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=rplF PE=3 SV=1
Length = 177
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 121/174 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+ + +PS V +TL GQ + VKGP G+LS EV+V +E + L + V+T+RA
Sbjct: 2 SRIGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIADEVEVKQEGAELLLAPRVDTKRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
M GL RTL NMV GV+ GFE+ L++VGVGYRAA++G L L LGFSH V + P G+
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELVGVGYRAAMKGTALSLQLGFSHDVDVAAPAGV 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
V + T I ++G DK A+G+ AA IR+ RPPEPYKGKGV+Y E +RRKEGK
Sbjct: 122 TFAVPKQTEIKIAGIDKQAVGEIAAKIRRIRPPEPYKGKGVRYAGEKVRRKEGK 175
>sp|Q7V531|RL6_PROMM 50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplF PE=3 SV=1
Length = 179
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 122/178 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK PI +P V +TL G + VKGP GELS P V V + ++ + V T + R++
Sbjct: 2 SRIGKNPIPIPDKVAVTLDGLAVSVKGPKGELSRTLPEGVSVSQVENTIVVTPTSQKRKS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL R+L NMV GVSKG+ +KL+++GVG RA ++G+ LV+S GFSHPV M P+G+
Sbjct: 62 RERHGLCRSLVANMVEGVSKGYTRKLELIGVGSRAQVKGKKLVVSAGFSHPVEMDPPEGV 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA IR RPPEPYKGKG++Y E I RK GK+GKK
Sbjct: 122 TFAVENNTNVTVSGADKELVGNEAAKIRAIRPPEPYKGKGIRYEGERILRKAGKSGKK 179
>sp|A2BYS2|RL6_PROM5 50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplF PE=3 SV=1
Length = 179
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 122/178 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK P+++P V++ + G + VKGP GEL + P V ++++ + V + R +
Sbjct: 2 SRIGKSPVQIPDKVSVDINGLTITVKGPKGELKRLMPEGVDFVQKENQIVVTPSTTKRYS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NMV GV+ G+ KKL++VGVG RA ++G+ LV+S G+SHPV MT PDGI
Sbjct: 62 RERHGLCRTLISNMVQGVTDGYSKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEMTPPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY DE I RK GK+GKK
Sbjct: 122 TYKVESNTNVTVSGIDKEIVGNEAAKIRSIRPPEPYKGKGIKYQDERIIRKAGKSGKK 179
>sp|B4R8N2|RL6_PHEZH 50S ribosomal protein L6 OS=Phenylobacterium zucineum (strain HLK1)
GN=rplF PE=3 SV=1
Length = 177
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 123/174 (70%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+ + VPS VT+T+ GQ + VKGP G+L+ E++V +E + + + K E+ RA
Sbjct: 2 SRIGKKAVAVPSGVTVTIDGQTVTVKGPKGQLAWTVAEEIEVRQEGAEILLSKRDESTRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
M GL RTL +NMVVGV++G+E+ L++VGVGYRAA++GQ L + LGFSH V + P GI
Sbjct: 62 QAMWGLSRTLVNNMVVGVTQGYEQTLELVGVGYRAAMKGQALSMQLGFSHDVDVAPPAGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ T I +SG DK +G+ AA IR+ RPPEPYKGKGV+Y E +RRKEGK
Sbjct: 122 TFATPKQTEIKISGIDKQLVGETAARIRRLRPPEPYKGKGVRYAGENVRRKEGK 175
>sp|A5ELL2|RL6_BRASB 50S ribosomal protein L6 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=rplF PE=3 SV=1
Length = 177
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 122/174 (70%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+P+ VPS VT T+ GQ +K+KGP G+L + +V V E+ +RV ET+RA
Sbjct: 2 SRIGKKPVTVPSGVTATVDGQTVKMKGPKGQLQFIVHDDVDVKFENGQVRVAPRSETKRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI
Sbjct: 62 RSLYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKNLQLALGYSHDVVYQIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T ITV+G D +GQ AA IR +RPPEPYKGKGVKY E I RKEGK
Sbjct: 122 TIAVPKPTEITVTGIDPQRVGQVAAEIRAYRPPEPYKGKGVKYAGEFIFRKEGK 175
>sp|Q31IW7|RL6_THICR 50S ribosomal protein L6 OS=Thiomicrospira crunogena (strain XCL-2)
GN=rplF PE=3 SV=1
Length = 177
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 115/174 (66%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRI K PI +PS V +T+ G D+ VKG G LS + V V ED + V E++ A
Sbjct: 2 SRIAKSPITLPSGVDVTINGTDVSVKGSKGALSKTFNHAVSVSLEDGVVTVAPKNESKNA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
G R++ +NMV+GV++GFEKKLQ+VGVGYRA +G+VL L+LGFSHPV +P+G+
Sbjct: 62 WAQAGTARSIINNMVLGVTEGFEKKLQLVGVGYRAQAQGKVLNLTLGFSHPVNHELPEGV 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
V T I V G DK +GQ AA IR +RPPEPYKGKGVKY DE I RKE K
Sbjct: 122 TVETPSQTEIVVKGADKQVVGQVAAEIRGYRPPEPYKGKGVKYADEYILRKEAK 175
>sp|Q7V9X6|RL6_PROMA 50S ribosomal protein L6 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplF PE=3 SV=1
Length = 179
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 121/178 (67%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI VP V +TL G + VKGP GEL+ P V +D+ D + V E R++
Sbjct: 2 SRIGKKPIPVPEKVAVTLDGLLVTVKGPKGELTRTLPEGVTIDQTDGLIIVSADSEKRKS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ HGL RTL NM+ GV+ G+ K+L++VGVG RA ++G+ LV+S G+SHPV + P+GI
Sbjct: 62 RERHGLSRTLVANMIEGVNNGYSKQLEIVGVGSRAQVKGKTLVVSAGYSHPVEVIPPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKK 224
VE NT + VSG DK +G AA IR RPPEPYKGKG+KY+ E I RK GK+GKK
Sbjct: 122 TFKVENNTNVLVSGIDKELVGNEAAKIRAIRPPEPYKGKGIKYLGERILRKAGKSGKK 179
>sp|Q2JIL3|RL6_SYNJB 50S ribosomal protein L6 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplF PE=3 SV=1
Length = 181
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 120/170 (70%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIG++PI +P+ V I + GQ + VKGP G+LS P + V + L V + ++R A
Sbjct: 2 SRIGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPLITVQQNAQMLTVSRLNDSRPA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q+HGL RTL NMV GVSKGFE++L++VGVGYRAA++G LVL++G+SHPV + P GI
Sbjct: 62 RQLHGLCRTLVANMVDGVSKGFERRLELVGVGYRAAIQGSKLVLNVGYSHPVEIPFPPGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 216
++ VE N I VSG DK +G AA IR RPPEPYKGKG++Y+ E +RR
Sbjct: 122 QIAVEGNNIIVVSGTDKELVGNTAARIRAVRPPEPYKGKGIRYLGEQVRR 171
>sp|B8ELE8|RL6_METSB 50S ribosomal protein L6 OS=Methylocella silvestris (strain BL2 /
DSM 15510 / NCIMB 13906) GN=rplF PE=3 SV=1
Length = 177
Score = 184 bits (467), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 119/174 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+P+ +PS VT + GQ + VKG G+LS P +V V D + V ET+RA
Sbjct: 2 SRIGKKPVAIPSGVTANVDGQLISVKGGKGQLSFAAPEDVTVVLGDGGIEVSPRNETKRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
M G+ R++ +N+VVGVSKGFE+KL++ GVGY+AA+ G+ L LSLGFSH V IPDGI
Sbjct: 62 RAMWGMTRSMVNNLVVGVSKGFERKLEITGVGYKAAVSGKNLQLSLGFSHDVTFPIPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ + T + +SG DK +GQ A+ IR RPPEPYKGKGVKY E I RKEGK
Sbjct: 122 SIVAAKPTEVAISGIDKRQVGQIASEIRALRPPEPYKGKGVKYAGEFIFRKEGK 175
>sp|Q488Z8|RL6_COLP3 50S ribosomal protein L6 OS=Colwellia psychrerythraea (strain 34H /
ATCC BAA-681) GN=rplF PE=3 SV=1
Length = 177
Score = 184 bits (466), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 117/174 (67%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+ K P+ VP+ VTITL GQD+ VKGP+GELS +V V +E++ + + + A
Sbjct: 2 SRVAKAPVVVPAGVTITLSGQDITVKGPIGELSRTIHSDVVVSQEENNIITNIVADVKGA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
G R L +NMV GVSKGFEKKL + GVGYRA G+ L LSLGFSHP++ IP+GI
Sbjct: 62 WAQAGTTRALINNMVEGVSKGFEKKLVLQGVGYRAKAAGKSLDLSLGFSHPIKHAIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
T +T+ G DK +GQ AA+IR +R PEPYKGKGV+YVDE +RRKE K
Sbjct: 122 TCETPSQTEVTLKGCDKHLVGQTAANIRAYRKPEPYKGKGVRYVDEYVRRKEAK 175
>sp|A4YSK7|RL6_BRASO 50S ribosomal protein L6 OS=Bradyrhizobium sp. (strain ORS278)
GN=rplF PE=3 SV=1
Length = 177
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 123/174 (70%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+P+ VPS VT T+ GQ +K+KGP G+L + +V+V E+ ++V ET+RA
Sbjct: 2 SRIGKKPVTVPSGVTATVDGQTVKMKGPKGQLQFLVHDDVEVKFENGQVKVAPRAETKRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI
Sbjct: 62 RSLYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKNLQLALGYSHDVVYQIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T IT++G D +GQ AA IR +RPPEPYKGKGVKY E I RKEGK
Sbjct: 122 TIAVPKPTEITITGIDPQRVGQVAAEIRAYRPPEPYKGKGVKYAGEFIFRKEGK 175
>sp|B3QBW5|RL6_RHOPT 50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain
TIE-1) GN=rplF PE=3 SV=1
Length = 177
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 120/174 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+GK+P+ VPS VT T+ GQ +K+KGP G+L V +V V ED ++V ET RA
Sbjct: 2 SRVGKKPVTVPSGVTATVEGQTVKMKGPKGQLQFVVHDDVDVKFEDGAVKVAPRHETNRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI
Sbjct: 62 RALYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKKLQLALGYSHDVLYDIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I RKEGK
Sbjct: 122 TITVPKPTEINVVGIDPQKVGQVAAEIRDYRPPEPYKGKGVRYADEFIFRKEGK 175
>sp|Q6N4U8|RL6_RHOPA 50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=rplF PE=1 SV=3
Length = 177
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 120/174 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+GK+P+ VPS VT T+ GQ +K+KGP G+L V +V V ED ++V ET RA
Sbjct: 2 SRVGKKPVTVPSGVTATVEGQTVKMKGPKGQLQFVVHDDVDVKFEDGAVKVAPRHETNRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++ GVGYRAA++G+ L L+LG+SH V IP+GI
Sbjct: 62 RALYGTARAQIANLVEGVTKGFEKKLEITGVGYRAAMQGKKLQLALGYSHDVLYDIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I RKEGK
Sbjct: 122 TITVPKPTEINVVGIDPQKVGQVAAEIRDYRPPEPYKGKGVRYADEFIFRKEGK 175
>sp|B2ITP1|RL6_NOSP7 50S ribosomal protein L6 OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=rplF PE=3 SV=1
Length = 182
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 120/170 (70%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+PI +P+ V + + G ++ VKGP GELS V + +E L V + ETR +
Sbjct: 2 SRIGKRPITIPAKVQVAINGTNIVVKGPKGELSRTLRDNVSLSQEGEILHVNRRDETRTS 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
Q+HGL RTL NMV GVS+GF+++L++ GVGYRA L+G+ LVL++G+SH V++ PDGI
Sbjct: 62 KQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQLQGRNLVLNMGYSHQVQIEPPDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 216
+ VE T + VSGYDK +G AA IR RPPEPYKGKG++Y EV+RR
Sbjct: 122 QFAVEGTTNVIVSGYDKEIVGNTAAKIRAVRPPEPYKGKGIRYAGEVVRR 171
>sp|Q9Z9J9|RL6_BACHD 50S ribosomal protein L6 OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=rplF PE=3 SV=1
Length = 178
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 122/177 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIG +P+E+PS VT+T+ G D+ VKGP GEL + E+ V ED+ + V + + +
Sbjct: 2 SRIGNKPVEIPSGVTVTVNGADVTVKGPKGELKRTFNPEIVVKVEDNTVVVERPSDKKEH 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+HG R+L NMV GVSKGFEK L++VGVGYRA GQ LVL++G+SHPV + GI
Sbjct: 62 RALHGTTRSLISNMVEGVSKGFEKSLELVGVGYRAQKSGQKLVLNVGYSHPVEIVPEKGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGK 223
++ V NT++TV G DK +G A++IR R PEPYKGKG++Y E +RRKEGK GK
Sbjct: 122 EIEVPSNTKVTVKGIDKERVGAVASNIRSVRLPEPYKGKGIRYEGEYVRRKEGKTGK 178
>sp|Q1XDI8|RK6_PORYE 50S ribosomal protein L6, chloroplastic OS=Porphyra yezoensis
GN=rpl6 PE=3 SV=1
Length = 180
Score = 183 bits (465), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 125/179 (69%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SRIGK+ I +P+N++ GQ + V GP G LS P + ++ + + V+ + +T+ A
Sbjct: 2 SRIGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLPAGINLEILNDTIAVKTSGQTKMA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+Q+HGL RTL NM+ GVS GF KKLQ+ GVGYR+ ++ Q L+LS+G+SH V++ P I
Sbjct: 62 SQLHGLSRTLISNMIEGVSNGFFKKLQIQGVGYRSQIDNQDLILSVGYSHVVKIKPPANI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGKKK 225
++ VE NT ITVSG DK +GQ A++IR RPPEPYKGKG++Y E +RRK GKAGK K
Sbjct: 122 EIKVENNTNITVSGIDKEVVGQVASTIRSIRPPEPYKGKGIRYQGEFVRRKAGKAGKGK 180
>sp|Q8ETW8|RL6_OCEIH 50S ribosomal protein L6 OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=rplF PE=3
SV=1
Length = 178
Score = 183 bits (465), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+G +P+E+P V + L + VKGP GELS ++K++ ED+ L V + + +
Sbjct: 2 SRVGLKPVEIPEGVELKLDNNTVTVKGPKGELSRELHPDMKINIEDNVLTVERPSDHKEH 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+HG R+L +NMV+GVSKGFEK L+++GVGYRA +G V++ G+SHPV + DGI
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEIIGVGYRAQKQGDKTVINAGYSHPVELEAIDGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGKAGK 223
++ V +NT+ITV G DK +G AA+IR RPPEPYKGKG++Y DE +RRKEGK K
Sbjct: 122 EIEVPKNTQITVKGIDKELVGAIAANIRAIRPPEPYKGKGIRYTDEYVRRKEGKTAK 178
>sp|Q134U4|RL6_RHOPS 50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplF PE=3 SV=1
Length = 177
Score = 183 bits (465), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 120/174 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+GK+P+ VPS VT T+ GQ +K+KGP G+L V +V V ED ++V ET RA
Sbjct: 2 SRVGKKPVTVPSGVTATVEGQTVKMKGPKGQLQFVVHDDVDVKFEDGSVKVAPRFETNRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++ GVGYRA+L+G+ L L+LG+SH V IP+GI
Sbjct: 62 QALYGTARAQIANLVDGVTKGFEKKLEITGVGYRASLQGKKLQLALGYSHDVIYDIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I RKEGK
Sbjct: 122 TITVPKPTEINVVGIDSQKVGQVAAEIRDYRPPEPYKGKGVRYSDEFIFRKEGK 175
>sp|Q0ABG0|RL6_ALHEH 50S ribosomal protein L6 OS=Alkalilimnicola ehrlichei (strain
MLHE-1) GN=rplF PE=3 SV=1
Length = 177
Score = 183 bits (465), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 120/174 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+ K+P++VPS V + L GQD+KVKGP GEL+ V V++ D LRV+ ++ RRA
Sbjct: 2 SRVAKRPVKVPSGVEVKLDGQDVKVKGPKGELAWTVHDWVAVEQADGELRVQAQLDDRRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
+ G R L +NMV GVS+GFE+KL++ GVGYRA ++G+ L L+LGFSHPV +P+GI
Sbjct: 62 VALAGTTRALLNNMVTGVSQGFERKLELRGVGYRAQVQGKNLNLTLGFSHPVDYPVPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ T I V G DK +G+ AA IR +RPPEPYKGKGV+Y DE + KE K
Sbjct: 122 TIEAPSQTEIVVKGADKQQVGEVAAQIRAFRPPEPYKGKGVRYADERVVLKEAK 175
>sp|Q2IXP5|RL6_RHOP2 50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain
HaA2) GN=rplF PE=3 SV=1
Length = 177
Score = 183 bits (464), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 120/174 (68%)
Query: 47 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRA 106
SR+GK+P+ VPS VT ++ GQ +K+KGP G+L V +V V ED ++V ET RA
Sbjct: 2 SRVGKKPVTVPSGVTASVEGQTVKMKGPKGQLHFVVHDDVDVKFEDGSVKVAPRFETNRA 61
Query: 107 NQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGI 166
++G R N+V GV+KGFEKKL++ GVGYRAAL+G+ L L+LG+SH V IP+GI
Sbjct: 62 QALYGTARAQIANLVEGVTKGFEKKLEITGVGYRAALQGKKLQLALGYSHDVIYDIPEGI 121
Query: 167 KVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKEGK 220
+ V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I RKEGK
Sbjct: 122 TITVPKPTEINVVGIDSQKVGQVAAEIRDYRPPEPYKGKGVRYSDEFIFRKEGK 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,642,625
Number of Sequences: 539616
Number of extensions: 3208646
Number of successful extensions: 9104
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 7771
Number of HSP's gapped (non-prelim): 840
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)