Query 027311
Match_columns 225
No_of_seqs 200 out of 1703
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 13:07:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027311hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gs3_A PHGPX, GPX-4, phospholi 100.0 2.6E-34 9E-39 221.1 17.5 163 61-224 21-185 (185)
2 2v1m_A Glutathione peroxidase; 100.0 2.2E-34 7.5E-39 217.6 16.8 162 63-224 5-166 (169)
3 2obi_A PHGPX, GPX-4, phospholi 100.0 2.5E-34 8.6E-39 220.7 16.5 166 58-224 16-183 (183)
4 2f8a_A Glutathione peroxidase 100.0 4.9E-34 1.7E-38 223.6 17.6 162 64-225 21-207 (208)
5 3dwv_A Glutathione peroxidase- 100.0 9.1E-35 3.1E-39 224.1 13.1 162 62-225 19-183 (187)
6 2i3y_A Epididymal secretory gl 100.0 6.1E-34 2.1E-38 223.8 17.9 160 64-225 30-211 (215)
7 2p5q_A Glutathione peroxidase 100.0 6.9E-34 2.3E-38 215.0 16.4 164 62-225 5-168 (170)
8 2p31_A CL683, glutathione pero 100.0 6.8E-34 2.3E-38 218.1 15.4 156 58-225 18-181 (181)
9 2r37_A Glutathione peroxidase 100.0 2.4E-33 8.1E-38 219.4 17.7 159 64-224 12-192 (207)
10 3kij_A Probable glutathione pe 100.0 2.5E-33 8.5E-38 214.7 15.8 153 63-224 12-169 (180)
11 2vup_A Glutathione peroxidase- 100.0 2.1E-32 7.1E-37 211.3 15.3 158 62-224 21-184 (190)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 4E-32 1.4E-36 206.1 13.3 155 65-225 8-168 (171)
13 3eyt_A Uncharacterized protein 100.0 2.3E-31 7.9E-36 198.9 13.4 144 65-225 2-152 (158)
14 4fo5_A Thioredoxin-like protei 100.0 1.9E-31 6.5E-36 196.5 11.2 136 61-223 5-143 (143)
15 4g2e_A Peroxiredoxin; redox pr 100.0 1.6E-31 5.4E-36 200.5 10.6 148 62-223 3-156 (157)
16 3fw2_A Thiol-disulfide oxidore 100.0 1.3E-30 4.4E-35 193.5 15.4 138 62-225 4-148 (150)
17 3lor_A Thiol-disulfide isomera 100.0 8.3E-31 2.9E-35 196.1 13.7 150 64-225 4-155 (160)
18 3ewl_A Uncharacterized conserv 100.0 1.6E-30 5.4E-35 191.0 13.4 135 64-224 2-140 (142)
19 4hde_A SCO1/SENC family lipopr 100.0 7.2E-30 2.5E-34 193.9 15.9 158 63-225 6-170 (170)
20 3eur_A Uncharacterized protein 100.0 4.3E-30 1.5E-34 188.9 13.5 133 63-221 5-141 (142)
21 2lrn_A Thiol:disulfide interch 100.0 6.7E-30 2.3E-34 190.0 13.9 139 63-225 3-141 (152)
22 1xzo_A BSSCO, hypothetical pro 100.0 1.1E-29 3.6E-34 192.7 14.8 157 61-225 5-172 (174)
23 3fkf_A Thiol-disulfide oxidore 100.0 2.2E-29 7.4E-34 185.6 15.4 138 62-225 4-146 (148)
24 2f9s_A Thiol-disulfide oxidore 100.0 1.3E-29 4.4E-34 188.1 13.8 138 64-225 1-138 (151)
25 3u5r_E Uncharacterized protein 100.0 9.2E-30 3.1E-34 200.7 13.8 148 61-225 30-187 (218)
26 3lwa_A Secreted thiol-disulfid 100.0 2.8E-29 9.6E-34 192.3 15.0 143 62-224 30-180 (183)
27 4gqc_A Thiol peroxidase, perox 100.0 8.6E-31 2.9E-35 197.8 6.0 147 63-224 5-159 (164)
28 3drn_A Peroxiredoxin, bacterio 100.0 2.8E-29 9.6E-34 188.7 14.2 124 63-211 2-131 (161)
29 3gkn_A Bacterioferritin comigr 100.0 2.2E-29 7.5E-34 189.3 13.4 148 63-224 7-161 (163)
30 3or5_A Thiol:disulfide interch 100.0 5.6E-29 1.9E-33 186.9 15.4 145 62-225 7-151 (165)
31 3hcz_A Possible thiol-disulfid 100.0 4.1E-29 1.4E-33 184.2 14.1 140 62-224 4-145 (148)
32 3raz_A Thioredoxin-related pro 100.0 2.7E-29 9.3E-34 186.5 12.5 134 68-224 4-139 (151)
33 2lrt_A Uncharacterized protein 100.0 5E-29 1.7E-33 185.7 13.4 134 63-224 9-144 (152)
34 2ggt_A SCO1 protein homolog, m 100.0 4.6E-29 1.6E-33 187.3 13.1 153 68-225 2-161 (164)
35 3gl3_A Putative thiol:disulfid 100.0 2E-28 6.9E-33 181.6 15.5 137 63-224 3-141 (152)
36 2cvb_A Probable thiol-disulfid 100.0 8.4E-29 2.9E-33 190.4 13.3 146 62-225 6-159 (188)
37 2lja_A Putative thiol-disulfid 100.0 3.1E-28 1.1E-32 180.6 15.9 139 63-224 3-142 (152)
38 3ixr_A Bacterioferritin comigr 100.0 5.7E-29 1.9E-33 190.4 11.8 152 59-224 17-177 (179)
39 2ywi_A Hypothetical conserved 100.0 6.9E-29 2.4E-33 191.9 12.0 146 62-224 17-173 (196)
40 2rli_A SCO2 protein homolog, m 100.0 1.3E-28 4.4E-33 186.2 13.2 150 70-224 7-163 (171)
41 3kh7_A Thiol:disulfide interch 100.0 1.4E-28 4.9E-33 187.6 13.1 137 61-224 28-166 (176)
42 2yzh_A Probable thiol peroxida 100.0 2.8E-28 9.5E-33 185.0 14.1 146 61-224 19-171 (171)
43 3me7_A Putative uncharacterize 100.0 2.1E-28 7.2E-33 185.7 13.2 155 64-225 2-162 (170)
44 2l5o_A Putative thioredoxin; s 100.0 2E-28 6.8E-33 181.8 12.8 138 64-224 3-140 (153)
45 3kcm_A Thioredoxin family prot 100.0 3.7E-28 1.3E-32 180.6 13.9 138 64-224 3-142 (154)
46 1jfu_A Thiol:disulfide interch 100.0 3.6E-28 1.2E-32 186.5 14.3 146 61-225 32-180 (186)
47 1we0_A Alkyl hydroperoxide red 100.0 5.5E-28 1.9E-32 185.9 15.2 136 64-224 2-156 (187)
48 2c0d_A Thioredoxin peroxidase 100.0 3.8E-28 1.3E-32 191.7 14.5 142 63-224 25-183 (221)
49 1n8j_A AHPC, alkyl hydroperoxi 100.0 2.7E-28 9.1E-33 187.8 12.5 142 64-224 2-155 (186)
50 1psq_A Probable thiol peroxida 100.0 4.7E-28 1.6E-32 182.4 13.5 143 61-223 14-163 (163)
51 1xvw_A Hypothetical protein RV 100.0 4.2E-28 1.5E-32 181.6 12.9 137 63-223 9-158 (160)
52 3erw_A Sporulation thiol-disul 100.0 4.3E-28 1.5E-32 177.9 12.2 139 61-221 7-145 (145)
53 3p7x_A Probable thiol peroxida 100.0 4.2E-28 1.4E-32 183.2 12.3 142 60-222 17-165 (166)
54 1q98_A Thiol peroxidase, TPX; 100.0 5.1E-28 1.8E-32 182.6 12.7 145 62-223 16-164 (165)
55 2k6v_A Putative cytochrome C o 100.0 3.6E-29 1.2E-33 189.3 5.8 154 64-224 11-172 (172)
56 2bmx_A Alkyl hydroperoxidase C 100.0 1.7E-27 5.7E-32 184.5 15.3 137 63-224 4-169 (195)
57 2b5x_A YKUV protein, TRXY; thi 100.0 7E-28 2.4E-32 177.4 12.0 142 64-225 2-145 (148)
58 1zof_A Alkyl hydroperoxide-red 100.0 7.7E-28 2.6E-32 186.8 12.8 136 64-224 2-160 (198)
59 3ha9_A Uncharacterized thiored 100.0 4.4E-28 1.5E-32 182.4 10.3 142 62-225 10-164 (165)
60 2i81_A 2-Cys peroxiredoxin; st 99.9 1.2E-27 4.3E-32 187.8 13.1 138 62-224 20-179 (213)
61 2pn8_A Peroxiredoxin-4; thiore 99.9 7.4E-28 2.5E-32 188.9 11.8 145 61-224 17-176 (211)
62 3ia1_A THIO-disulfide isomeras 99.9 6.6E-28 2.3E-32 179.3 10.6 140 62-224 4-143 (154)
63 1uul_A Tryparedoxin peroxidase 99.9 1.8E-27 6.1E-32 185.3 13.3 137 63-224 6-164 (202)
64 3zrd_A Thiol peroxidase; oxido 99.9 1.7E-27 5.9E-32 185.3 12.8 146 61-223 50-199 (200)
65 2b7k_A SCO1 protein; metalloch 99.9 1.6E-27 5.5E-32 185.4 12.4 157 63-224 13-178 (200)
66 2jsy_A Probable thiol peroxida 99.9 7E-28 2.4E-32 181.9 10.1 145 61-225 16-167 (167)
67 1zzo_A RV1677; thioredoxin fol 99.9 2.8E-27 9.7E-32 171.6 12.9 134 65-225 1-135 (136)
68 2h01_A 2-Cys peroxiredoxin; th 99.9 2.4E-27 8.3E-32 183.1 12.8 136 64-224 1-158 (192)
69 2a4v_A Peroxiredoxin DOT5; yea 99.9 1.3E-27 4.4E-32 179.2 10.7 125 62-213 6-139 (159)
70 3ztl_A Thioredoxin peroxidase; 99.9 1.6E-27 5.3E-32 188.4 11.7 134 61-213 38-182 (222)
71 1lu4_A Soluble secreted antige 99.9 3.6E-27 1.2E-31 171.2 12.5 132 67-225 2-136 (136)
72 1qmv_A Human thioredoxin perox 99.9 4E-27 1.4E-31 182.7 13.2 142 63-223 5-161 (197)
73 2hyx_A Protein DIPZ; thioredox 99.9 2.1E-27 7.3E-32 199.0 12.2 145 61-224 49-198 (352)
74 1zye_A Thioredoxin-dependent p 99.9 7.4E-27 2.5E-31 184.3 14.5 138 62-224 26-184 (220)
75 1xvq_A Thiol peroxidase; thior 99.9 7.2E-27 2.5E-31 177.9 13.3 144 61-223 16-163 (175)
76 3qpm_A Peroxiredoxin; oxidored 99.9 6.3E-27 2.2E-31 186.9 13.1 146 59-223 44-204 (240)
77 1tp9_A Peroxiredoxin, PRX D (t 99.9 2.6E-27 8.8E-32 178.3 10.0 133 63-210 4-146 (162)
78 3hdc_A Thioredoxin family prot 99.9 5.7E-27 1.9E-31 175.3 11.0 138 59-223 11-150 (158)
79 4evm_A Thioredoxin family prot 99.9 2.1E-26 7.3E-31 166.9 13.5 136 68-223 1-137 (138)
80 3tjj_A Peroxiredoxin-4; thiore 99.9 2.1E-26 7.3E-31 185.1 14.5 145 60-223 59-218 (254)
81 2ls5_A Uncharacterized protein 99.9 8.2E-29 2.8E-33 185.4 0.0 140 62-224 6-147 (159)
82 2b1k_A Thiol:disulfide interch 99.9 1.2E-26 4.1E-31 175.1 11.8 137 61-224 20-159 (168)
83 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 1.4E-26 5E-31 175.1 11.3 133 63-210 3-142 (167)
84 3mng_A Peroxiredoxin-5, mitoch 99.9 1.7E-26 5.7E-31 175.6 11.4 147 63-223 15-173 (173)
85 3uma_A Hypothetical peroxiredo 99.9 9.8E-27 3.4E-31 178.6 9.6 148 61-223 24-184 (184)
86 2h30_A Thioredoxin, peptide me 99.9 7.7E-27 2.6E-31 175.1 8.9 140 64-224 15-155 (164)
87 2v2g_A Peroxiredoxin 6; oxidor 99.9 1.8E-26 6.1E-31 183.3 11.3 149 63-224 3-164 (233)
88 1kng_A Thiol:disulfide interch 99.9 1.3E-26 4.6E-31 172.3 9.7 137 62-224 7-151 (156)
89 1prx_A HORF6; peroxiredoxin, h 99.9 7.9E-26 2.7E-30 178.8 13.7 148 63-224 5-168 (224)
90 1xcc_A 1-Cys peroxiredoxin; un 99.9 4.5E-26 1.5E-30 179.7 10.9 149 63-224 3-165 (220)
91 3keb_A Probable thiol peroxida 99.9 2.6E-25 8.9E-30 174.5 14.6 144 61-224 20-175 (224)
92 3sbc_A Peroxiredoxin TSA1; alp 99.9 2.2E-25 7.4E-30 173.8 13.4 146 59-223 19-179 (216)
93 1nm3_A Protein HI0572; hybrid, 99.9 1.5E-25 5.2E-30 179.0 10.3 134 63-211 3-144 (241)
94 3a2v_A Probable peroxiredoxin; 99.9 2.1E-25 7.3E-30 178.4 11.1 144 63-224 5-161 (249)
95 2pwj_A Mitochondrial peroxired 99.9 1.6E-25 5.6E-30 170.0 9.7 145 63-222 7-170 (171)
96 3tue_A Tryparedoxin peroxidase 99.9 1.8E-24 6.1E-29 168.9 13.3 144 62-223 25-183 (219)
97 1i5g_A Tryparedoxin II; electr 99.9 2.1E-25 7.2E-30 164.1 7.0 122 64-208 2-127 (144)
98 2lus_A Thioredoxion; CR-Trp16, 99.9 1.8E-26 6.1E-31 169.2 0.0 122 67-209 2-127 (143)
99 3s9f_A Tryparedoxin; thioredox 99.9 9.6E-26 3.3E-30 170.2 3.6 123 63-209 22-148 (165)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.9 7.6E-25 2.6E-29 161.5 6.6 122 64-209 3-128 (146)
101 1o73_A Tryparedoxin; electron 99.9 1.3E-24 4.4E-29 159.7 6.4 121 64-208 3-127 (144)
102 4eo3_A Bacterioferritin comigr 99.9 2E-23 6.8E-28 173.2 12.6 132 67-223 2-137 (322)
103 4f82_A Thioredoxin reductase; 99.9 3.7E-22 1.3E-26 151.0 10.2 147 62-223 9-174 (176)
104 2xhf_A Peroxiredoxin 5; oxidor 99.8 2.2E-20 7.7E-25 140.9 11.8 135 61-210 12-152 (171)
105 1xiy_A Peroxiredoxin, pfaop; a 99.8 1.6E-20 5.5E-25 143.3 9.7 131 64-209 2-153 (182)
106 2l57_A Uncharacterized protein 99.8 3.9E-19 1.3E-23 127.5 8.6 110 68-224 5-116 (126)
107 2fwh_A Thiol:disulfide interch 99.8 1.1E-19 3.8E-24 132.1 3.8 116 64-223 5-126 (134)
108 3hxs_A Thioredoxin, TRXP; elec 99.8 3.2E-18 1.1E-22 125.1 11.0 105 73-225 35-139 (141)
109 2ju5_A Thioredoxin disulfide i 99.7 2.2E-18 7.5E-23 128.2 7.0 122 64-225 25-152 (154)
110 3ul3_B Thioredoxin, thioredoxi 99.7 8.4E-18 2.9E-22 121.0 9.7 108 65-222 20-127 (128)
111 3f9u_A Putative exported cytoc 99.7 1.5E-18 5.2E-23 131.2 0.9 122 81-224 39-165 (172)
112 3p2a_A Thioredoxin 2, putative 99.7 9.9E-17 3.4E-21 118.2 9.2 113 64-224 30-142 (148)
113 3fk8_A Disulphide isomerase; A 99.7 2E-16 7E-21 114.3 8.2 94 87-224 27-132 (133)
114 3zzx_A Thioredoxin; oxidoreduc 99.7 3.2E-16 1.1E-20 109.1 8.2 88 85-222 16-103 (105)
115 1dby_A Chloroplast thioredoxin 99.6 1.2E-15 4.2E-20 105.7 10.5 90 88-225 18-107 (107)
116 2voc_A Thioredoxin; electron t 99.6 3.7E-16 1.3E-20 109.7 7.8 89 88-224 16-104 (112)
117 3qfa_C Thioredoxin; protein-pr 99.6 4.1E-16 1.4E-20 110.3 8.0 90 85-224 27-116 (116)
118 1nsw_A Thioredoxin, TRX; therm 99.6 2.3E-16 7.9E-21 109.1 6.5 90 88-225 16-105 (105)
119 3tco_A Thioredoxin (TRXA-1); d 99.6 2.7E-16 9.3E-21 109.2 6.9 101 77-225 9-109 (109)
120 2trx_A Thioredoxin; electron t 99.6 9.3E-16 3.2E-20 106.5 9.3 102 76-225 6-108 (108)
121 2pu9_C TRX-F, thioredoxin F-ty 99.6 9.5E-16 3.2E-20 107.2 9.3 92 85-225 20-111 (111)
122 3die_A Thioredoxin, TRX; elect 99.6 8.8E-16 3E-20 106.1 8.5 89 88-224 18-106 (106)
123 2kuc_A Putative disulphide-iso 99.6 5.1E-16 1.8E-20 111.6 7.6 99 81-224 19-120 (130)
124 2l5l_A Thioredoxin; structural 99.6 1.2E-15 4E-20 110.9 9.5 89 88-224 37-125 (136)
125 3f3q_A Thioredoxin-1; His TAG, 99.6 4.3E-16 1.5E-20 108.9 6.5 88 87-224 22-109 (109)
126 1z6n_A Hypothetical protein PA 99.6 1.3E-16 4.4E-21 120.2 3.7 82 83-209 48-129 (167)
127 4euy_A Uncharacterized protein 99.6 9.8E-16 3.4E-20 106.2 7.8 89 88-225 17-105 (105)
128 1t00_A Thioredoxin, TRX; redox 99.6 1.7E-15 5.8E-20 106.0 8.8 90 88-225 22-111 (112)
129 1w4v_A Thioredoxin, mitochondr 99.6 1.9E-15 6.7E-20 107.1 9.0 90 88-225 30-119 (119)
130 3gix_A Thioredoxin-like protei 99.6 4.2E-16 1.4E-20 115.3 5.7 89 88-224 22-120 (149)
131 3cxg_A Putative thioredoxin; m 99.6 2.5E-16 8.7E-21 114.2 4.2 102 73-224 24-128 (133)
132 2dml_A Protein disulfide-isome 99.6 5.7E-15 1.9E-19 106.1 11.2 90 88-224 34-123 (130)
133 2ppt_A Thioredoxin-2; thiredox 99.6 6.8E-16 2.3E-20 114.9 6.3 90 88-225 63-152 (155)
134 1thx_A Thioredoxin, thioredoxi 99.6 5.2E-15 1.8E-19 103.7 10.6 102 75-224 10-112 (115)
135 2o8v_B Thioredoxin 1; disulfid 99.6 2.6E-15 9.1E-20 108.0 9.2 90 88-225 39-128 (128)
136 3qou_A Protein YBBN; thioredox 99.6 2.2E-15 7.5E-20 122.7 9.8 90 87-224 24-113 (287)
137 2dj1_A Protein disulfide-isome 99.6 2.5E-15 8.6E-20 109.3 8.8 104 74-225 19-124 (140)
138 3d6i_A Monothiol glutaredoxin- 99.6 5E-15 1.7E-19 103.6 10.0 89 88-224 20-108 (112)
139 1xfl_A Thioredoxin H1; AT3G510 99.6 2.9E-15 9.9E-20 107.2 8.9 89 87-225 36-124 (124)
140 2i4a_A Thioredoxin; acidophIle 99.6 4.4E-15 1.5E-19 102.7 9.4 102 75-224 5-107 (107)
141 1ep7_A Thioredoxin CH1, H-type 99.6 4.3E-15 1.5E-19 103.8 9.3 88 89-225 24-111 (112)
142 1x5d_A Protein disulfide-isome 99.6 4.7E-15 1.6E-19 106.8 9.6 90 88-224 24-116 (133)
143 1fb6_A Thioredoxin M; electron 99.6 2.8E-15 9.6E-20 103.4 7.9 102 75-224 3-105 (105)
144 1faa_A Thioredoxin F; electron 99.6 3.9E-15 1.3E-19 106.1 8.8 91 86-225 34-124 (124)
145 2vlu_A Thioredoxin, thioredoxi 99.6 9.9E-16 3.4E-20 108.9 5.5 111 65-225 8-120 (122)
146 2e0q_A Thioredoxin; electron t 99.6 2E-15 7E-20 103.6 6.8 89 88-225 15-103 (104)
147 3hz4_A Thioredoxin; NYSGXRC, P 99.6 1.9E-15 6.5E-20 110.4 7.0 89 88-224 23-111 (140)
148 1x5e_A Thioredoxin domain cont 99.6 4.7E-15 1.6E-19 106.0 8.7 101 74-224 9-109 (126)
149 2j23_A Thioredoxin; immune pro 99.6 3.5E-15 1.2E-19 106.2 7.8 90 88-225 32-121 (121)
150 2djj_A PDI, protein disulfide- 99.6 4.5E-15 1.5E-19 105.2 8.2 103 73-224 8-116 (121)
151 3d22_A TRXH4, thioredoxin H-ty 99.6 1.6E-15 5.5E-20 110.4 5.8 93 82-224 39-131 (139)
152 2yzu_A Thioredoxin; redox prot 99.6 3.2E-15 1.1E-19 103.6 7.1 89 88-224 17-105 (109)
153 1sen_A Thioredoxin-like protei 99.6 1.1E-16 3.6E-21 120.4 -0.6 111 69-224 27-147 (164)
154 3gnj_A Thioredoxin domain prot 99.6 8.2E-15 2.8E-19 102.1 8.8 89 88-224 21-109 (111)
155 2dj3_A Protein disulfide-isome 99.6 8.4E-15 2.9E-19 105.6 9.0 107 72-224 7-117 (133)
156 3m9j_A Thioredoxin; oxidoreduc 99.6 6.7E-15 2.3E-19 101.5 8.1 89 86-224 17-105 (105)
157 3apq_A DNAJ homolog subfamily 99.6 1.2E-15 3.9E-20 119.1 4.7 107 70-224 95-201 (210)
158 2qsi_A Putative hydrogenase ex 99.6 1.5E-14 5E-19 104.6 10.0 88 89-224 33-122 (137)
159 2av4_A Thioredoxin-like protei 99.6 1.7E-14 5.8E-19 106.1 9.5 89 88-224 40-138 (160)
160 2lst_A Thioredoxin; structural 99.3 2.9E-16 9.9E-21 113.0 0.0 101 79-224 9-115 (130)
161 2wz9_A Glutaredoxin-3; protein 99.5 1.4E-14 4.9E-19 107.3 8.6 87 88-224 31-117 (153)
162 2oe3_A Thioredoxin-3; electron 99.5 1E-14 3.5E-19 102.7 7.4 85 88-222 29-113 (114)
163 1gh2_A Thioredoxin-like protei 99.5 1.4E-14 4.6E-19 100.6 7.8 87 88-224 20-106 (107)
164 1r26_A Thioredoxin; redox-acti 99.5 1.2E-14 4E-19 104.3 7.6 87 88-224 36-122 (125)
165 1xwb_A Thioredoxin; dimerizati 99.5 2.4E-14 8.3E-19 98.8 8.9 89 87-224 18-106 (106)
166 2vim_A Thioredoxin, TRX; thior 99.5 1.4E-14 4.7E-19 99.7 7.6 89 86-224 16-104 (104)
167 1ti3_A Thioredoxin H, PTTRXH1; 99.5 2.3E-14 8E-19 100.1 8.9 89 87-225 24-112 (113)
168 2xc2_A Thioredoxinn; oxidoredu 99.5 1.1E-14 3.9E-19 102.7 7.2 90 84-224 28-117 (117)
169 1v98_A Thioredoxin; oxidoreduc 99.5 2.9E-14 1E-18 103.8 9.4 104 74-225 35-138 (140)
170 2l6c_A Thioredoxin; oxidoreduc 99.5 1.6E-14 5.5E-19 101.0 7.7 88 88-224 18-105 (110)
171 1syr_A Thioredoxin; SGPP, stru 99.5 2.3E-14 7.9E-19 100.3 8.5 88 88-225 25-112 (112)
172 2qgv_A Hydrogenase-1 operon pr 99.5 1.9E-14 6.5E-19 104.3 7.9 91 88-225 33-125 (140)
173 3h79_A Thioredoxin-like protei 99.5 2.7E-14 9.3E-19 102.3 8.1 105 73-223 16-126 (127)
174 2f51_A Thioredoxin; electron t 99.5 6.5E-15 2.2E-19 104.4 4.6 101 74-223 5-111 (118)
175 3emx_A Thioredoxin; structural 99.5 9.9E-15 3.4E-19 105.9 5.4 96 88-225 31-126 (135)
176 1qgv_A Spliceosomal protein U5 99.5 1.9E-14 6.4E-19 105.5 6.7 89 88-224 22-120 (142)
177 2vm1_A Thioredoxin, thioredoxi 99.5 4.5E-14 1.5E-18 99.4 8.4 88 88-225 27-114 (118)
178 3dxb_A Thioredoxin N-terminall 99.5 1.5E-14 5E-19 113.8 6.2 105 73-225 13-118 (222)
179 1oaz_A Thioredoxin 1; immune s 99.5 1.4E-14 4.7E-19 103.5 5.4 90 88-225 20-123 (123)
180 2dj0_A Thioredoxin-related tra 99.5 1.5E-14 5.2E-19 105.0 5.5 91 86-217 23-113 (137)
181 2i1u_A Thioredoxin, TRX, MPT46 99.5 3.4E-14 1.2E-18 100.5 7.2 89 88-224 29-117 (121)
182 1zma_A Bacterocin transport ac 99.5 4.7E-14 1.6E-18 99.7 7.9 90 88-221 28-117 (118)
183 3uvt_A Thioredoxin domain-cont 99.5 6.1E-14 2.1E-18 97.5 7.9 88 89-223 21-110 (111)
184 1mek_A Protein disulfide isome 99.5 2.1E-14 7.1E-19 101.2 5.0 91 88-225 23-117 (120)
185 3aps_A DNAJ homolog subfamily 99.5 1.7E-14 5.7E-19 102.4 4.4 89 88-224 20-112 (122)
186 2yj7_A LPBCA thioredoxin; oxid 99.2 3.9E-15 1.3E-19 102.6 0.0 103 74-224 3-106 (106)
187 3idv_A Protein disulfide-isome 99.5 1.1E-13 3.6E-18 109.5 7.9 103 74-224 17-121 (241)
188 1nho_A Probable thioredoxin; b 99.5 1.2E-13 4.2E-18 91.4 6.5 83 91-225 3-85 (85)
189 1fo5_A Thioredoxin; disulfide 99.4 1.6E-13 5.5E-18 90.8 6.7 83 90-224 3-85 (85)
190 1wmj_A Thioredoxin H-type; str 99.4 6E-14 2E-18 100.5 3.2 89 87-225 34-122 (130)
191 3ph9_A Anterior gradient prote 99.4 9.2E-14 3.1E-18 102.7 3.9 77 87-210 42-120 (151)
192 3ira_A Conserved protein; meth 99.4 4.9E-13 1.7E-17 100.8 7.5 105 80-223 30-142 (173)
193 2dbc_A PDCL2, unnamed protein 99.4 5.2E-13 1.8E-17 96.8 7.1 84 88-223 29-119 (135)
194 1a8l_A Protein disulfide oxido 99.4 1.8E-12 6.3E-17 101.6 10.7 91 88-225 133-226 (226)
195 2es7_A Q8ZP25_salty, putative 99.4 3.7E-13 1.3E-17 98.5 5.8 88 89-225 34-125 (142)
196 3t58_A Sulfhydryl oxidase 1; o 99.3 2E-12 6.9E-17 113.5 9.0 107 74-224 14-126 (519)
197 3q6o_A Sulfhydryl oxidase 1; p 99.3 4.3E-12 1.5E-16 100.9 9.5 91 88-224 29-126 (244)
198 2hls_A Protein disulfide oxido 99.3 1.1E-11 3.9E-16 98.6 11.6 110 64-224 103-225 (243)
199 3evi_A Phosducin-like protein 99.3 3.4E-12 1.2E-16 90.4 7.1 82 89-222 23-111 (118)
200 1ilo_A Conserved hypothetical 99.3 3.5E-11 1.2E-15 78.0 9.3 74 92-220 2-76 (77)
201 1wou_A Thioredoxin -related pr 99.3 5.6E-12 1.9E-16 89.7 5.7 95 86-222 21-122 (123)
202 3iv4_A Putative oxidoreductase 99.3 1.3E-11 4.6E-16 85.7 7.3 86 89-220 24-111 (112)
203 2r2j_A Thioredoxin domain-cont 99.3 9.8E-12 3.4E-16 105.3 7.9 104 74-224 7-116 (382)
204 3dml_A Putative uncharacterize 99.3 2.7E-12 9.2E-17 90.2 3.6 92 88-224 17-109 (116)
205 3ed3_A Protein disulfide-isome 99.2 2.5E-11 8.7E-16 99.4 9.8 92 88-224 34-141 (298)
206 3idv_A Protein disulfide-isome 99.2 1.9E-11 6.5E-16 96.5 8.7 89 88-224 146-236 (241)
207 3f8u_A Protein disulfide-isome 99.2 1.2E-11 4.2E-16 107.5 7.7 102 76-224 356-460 (481)
208 1sji_A Calsequestrin 2, calseq 99.2 4.3E-11 1.5E-15 100.1 10.6 88 88-224 27-121 (350)
209 1a0r_P Phosducin, MEKA, PP33; 99.2 2.4E-11 8.1E-16 96.6 8.3 85 88-222 132-223 (245)
210 3kp8_A Vkorc1/thioredoxin doma 99.2 5.1E-13 1.7E-17 92.9 -2.6 40 80-119 3-42 (106)
211 2trc_P Phosducin, MEKA, PP33; 99.2 2.7E-11 9.3E-16 94.8 5.9 85 88-222 119-210 (217)
212 2b5e_A Protein disulfide-isome 99.2 4.3E-11 1.5E-15 104.8 7.8 90 88-224 30-121 (504)
213 2ywm_A Glutaredoxin-like prote 99.2 9.3E-11 3.2E-15 92.1 8.9 85 88-224 135-219 (229)
214 3apo_A DNAJ homolog subfamily 99.2 7.1E-11 2.4E-15 108.6 9.4 93 84-225 450-542 (780)
215 3qcp_A QSOX from trypanosoma b 99.2 1.2E-10 4E-15 100.4 9.5 59 74-132 25-92 (470)
216 3f8u_A Protein disulfide-isome 99.1 8.7E-11 3E-15 102.2 8.7 89 88-224 20-108 (481)
217 2dlx_A UBX domain-containing p 99.1 6.6E-10 2.3E-14 82.1 11.0 91 88-224 41-135 (153)
218 3uem_A Protein disulfide-isome 99.1 1.8E-10 6.1E-15 96.6 8.1 88 88-223 266-355 (361)
219 2b5e_A Protein disulfide-isome 99.1 7.8E-11 2.7E-15 103.1 6.1 102 74-224 360-466 (504)
220 3apo_A DNAJ homolog subfamily 99.1 8E-11 2.7E-15 108.2 5.0 89 88-224 674-766 (780)
221 3gyk_A 27KDA outer membrane pr 99.0 3.2E-10 1.1E-14 85.3 5.1 50 79-130 12-61 (175)
222 3ga4_A Dolichyl-diphosphooligo 99.0 1.7E-09 6E-14 81.5 8.9 45 88-132 36-91 (178)
223 3us3_A Calsequestrin-1; calciu 99.0 4.1E-09 1.4E-13 88.7 11.6 89 88-224 29-123 (367)
224 3hd5_A Thiol:disulfide interch 99.0 9E-10 3.1E-14 84.4 6.5 43 88-131 24-66 (195)
225 1eej_A Thiol:disulfide interch 98.9 4.5E-10 1.5E-14 87.7 3.7 45 82-130 79-123 (216)
226 2djk_A PDI, protein disulfide- 98.9 1.4E-09 4.7E-14 78.4 5.7 88 88-224 22-114 (133)
227 2e7p_A Glutaredoxin; thioredox 98.9 5.2E-10 1.8E-14 78.4 2.7 86 88-223 18-106 (116)
228 1ttz_A Conserved hypothetical 98.8 4.6E-09 1.6E-13 70.0 5.5 74 93-224 3-76 (87)
229 3h93_A Thiol:disulfide interch 98.8 1.7E-09 5.8E-14 82.6 3.8 43 88-131 24-66 (192)
230 2znm_A Thiol:disulfide interch 98.8 9.9E-09 3.4E-13 78.4 6.6 43 88-131 21-63 (195)
231 1a8l_A Protein disulfide oxido 98.7 4E-08 1.4E-12 76.6 9.2 92 86-224 19-112 (226)
232 2ywm_A Glutaredoxin-like prote 98.7 8.7E-08 3E-12 74.9 9.1 91 87-224 19-114 (229)
233 2fgx_A Putative thioredoxin; N 98.7 3.5E-08 1.2E-12 68.2 5.6 39 91-132 30-68 (107)
234 4h86_A Peroxiredoxin type-2; o 98.6 2E-07 7E-12 70.9 10.1 133 60-209 23-180 (199)
235 1v58_A Thiol:disulfide interch 98.6 3.5E-08 1.2E-12 78.3 5.7 135 82-224 90-232 (241)
236 1hyu_A AHPF, alkyl hydroperoxi 98.6 2E-07 6.8E-12 81.9 10.2 82 88-222 116-197 (521)
237 1t3b_A Thiol:disulfide interch 98.6 9.2E-08 3.2E-12 74.2 6.0 39 88-130 85-123 (211)
238 2rem_A Disulfide oxidoreductas 98.5 1.3E-07 4.6E-12 71.9 6.4 43 88-131 24-66 (193)
239 2k8s_A Thioredoxin; dimer, str 98.5 8.6E-08 2.9E-12 62.5 4.1 36 93-131 4-39 (80)
240 2c0g_A ERP29 homolog, windbeut 98.5 8.3E-07 2.9E-11 70.5 10.3 90 88-224 32-131 (248)
241 1z6m_A Conserved hypothetical 98.4 9.6E-07 3.3E-11 66.1 9.1 50 82-131 20-70 (175)
242 1wjk_A C330018D20RIK protein; 98.4 2E-07 6.9E-12 63.6 4.8 38 89-131 15-52 (100)
243 2qc7_A ERP31, ERP28, endoplasm 98.4 9.1E-07 3.1E-11 70.0 9.3 90 88-223 21-117 (240)
244 1ego_A Glutaredoxin; electron 98.4 5.9E-07 2E-11 58.8 6.0 37 93-131 3-39 (85)
245 3hz8_A Thiol:disulfide interch 98.3 2.7E-07 9.2E-12 70.6 3.9 43 88-131 23-65 (193)
246 2hls_A Protein disulfide oxido 98.1 6.7E-06 2.3E-10 65.0 7.7 43 89-131 25-73 (243)
247 3uem_A Protein disulfide-isome 98.1 1E-05 3.5E-10 67.4 9.1 90 90-224 136-229 (361)
248 3kp9_A Vkorc1/thioredoxin doma 98.1 1.3E-06 4.5E-11 70.8 2.4 38 81-118 189-226 (291)
249 1h75_A Glutaredoxin-like prote 98.0 2.7E-06 9.3E-11 55.1 3.3 32 93-131 3-34 (81)
250 3l9v_A Putative thiol-disulfid 98.0 3.5E-06 1.2E-10 64.0 2.9 43 88-131 13-58 (189)
251 1r7h_A NRDH-redoxin; thioredox 97.9 1.8E-05 6.1E-10 50.2 5.2 32 93-131 3-34 (75)
252 3gv1_A Disulfide interchange p 97.8 2.8E-05 9.6E-10 56.7 6.0 36 88-129 13-48 (147)
253 3feu_A Putative lipoprotein; a 97.8 2.4E-05 8.2E-10 59.2 5.6 40 89-131 22-61 (185)
254 3c7m_A Thiol:disulfide interch 97.8 2.8E-05 9.7E-10 58.8 5.4 43 88-131 16-59 (195)
255 4dvc_A Thiol:disulfide interch 97.8 4.3E-05 1.5E-09 57.1 6.4 43 88-131 20-62 (184)
256 1kte_A Thioltransferase; redox 97.8 1E-05 3.4E-10 55.2 2.3 26 93-118 14-39 (105)
257 1un2_A DSBA, thiol-disulfide i 97.7 4.1E-06 1.4E-10 64.2 -0.4 44 88-132 112-158 (197)
258 2lqo_A Putative glutaredoxin R 97.6 0.00087 3E-08 44.6 9.8 78 93-224 6-83 (92)
259 2ec4_A FAS-associated factor 1 97.6 0.0006 2E-08 51.2 9.6 110 86-224 52-167 (178)
260 2cq9_A GLRX2 protein, glutared 97.5 0.00011 3.9E-09 52.1 4.8 33 91-131 28-60 (130)
261 2hze_A Glutaredoxin-1; thiored 97.5 2.2E-05 7.6E-10 54.5 0.9 33 92-131 20-55 (114)
262 3l9s_A Thiol:disulfide interch 97.5 0.00018 6.3E-09 54.6 5.8 43 88-131 20-65 (191)
263 2ht9_A Glutaredoxin-2; thiored 97.4 0.00019 6.6E-09 52.1 4.8 23 91-114 50-72 (146)
264 3nzn_A Glutaredoxin; structura 97.4 0.0003 1E-08 47.7 5.4 23 92-114 23-45 (103)
265 3f4s_A Alpha-DSBA1, putative u 97.1 0.00058 2E-08 53.3 4.8 45 87-131 37-83 (226)
266 1fov_A Glutaredoxin 3, GRX3; a 97.0 0.002 6.7E-08 41.2 6.0 32 93-131 3-34 (82)
267 3c1r_A Glutaredoxin-1; oxidize 96.9 0.00096 3.3E-08 46.4 4.5 36 93-132 27-63 (118)
268 3ic4_A Glutaredoxin (GRX-1); s 96.9 0.0023 7.8E-08 42.0 6.1 22 93-114 14-35 (92)
269 4f9z_D Endoplasmic reticulum r 96.8 0.01 3.6E-07 45.9 10.3 92 91-225 133-225 (227)
270 3msz_A Glutaredoxin 1; alpha-b 96.8 0.002 6.7E-08 41.8 5.1 21 93-113 6-26 (89)
271 3rhb_A ATGRXC5, glutaredoxin-C 96.8 0.0022 7.5E-08 44.0 5.2 22 93-114 21-42 (113)
272 2yan_A Glutaredoxin-3; oxidore 96.8 0.0037 1.3E-07 42.3 6.2 33 91-131 18-55 (105)
273 3qmx_A Glutaredoxin A, glutare 96.1 0.0095 3.3E-07 39.9 5.2 34 91-131 16-49 (99)
274 3h8q_A Thioredoxin reductase 3 96.1 0.014 4.8E-07 40.1 6.1 19 96-114 22-40 (114)
275 2khp_A Glutaredoxin; thioredox 95.8 0.012 4.2E-07 38.3 4.6 32 93-131 8-39 (92)
276 3kzq_A Putative uncharacterize 95.8 0.12 4.1E-06 39.1 10.8 37 187-224 166-202 (208)
277 1wik_A Thioredoxin-like protei 95.5 0.046 1.6E-06 37.0 6.7 35 91-132 16-54 (109)
278 3ctg_A Glutaredoxin-2; reduced 95.3 0.014 4.7E-07 41.2 3.6 21 93-113 39-60 (129)
279 2klx_A Glutaredoxin; thioredox 95.1 0.018 6.1E-07 37.3 3.3 22 93-114 8-29 (89)
280 2l4c_A Endoplasmic reticulum r 94.2 0.52 1.8E-05 32.7 9.4 35 89-128 39-73 (124)
281 2axo_A Hypothetical protein AT 94.1 0.72 2.5E-05 36.6 11.0 39 91-132 44-82 (270)
282 3q6o_A Sulfhydryl oxidase 1; p 94.0 0.31 1.1E-05 37.7 8.8 37 187-223 202-238 (244)
283 2in3_A Hypothetical protein; D 93.0 0.86 3E-05 34.3 9.7 37 187-224 173-209 (216)
284 1sji_A Calsequestrin 2, calseq 93.0 0.65 2.2E-05 38.0 9.5 42 90-131 246-288 (350)
285 2ct6_A SH3 domain-binding glut 92.8 0.41 1.4E-05 32.4 6.8 36 93-131 10-47 (111)
286 3tdg_A DSBG, putative uncharac 92.6 0.062 2.1E-06 42.8 2.6 40 88-130 146-185 (273)
287 3us3_A Calsequestrin-1; calciu 91.8 0.75 2.6E-05 38.0 8.5 42 90-131 248-290 (367)
288 3gha_A Disulfide bond formatio 91.8 0.19 6.4E-06 38.0 4.4 44 88-131 28-73 (202)
289 1aba_A Glutaredoxin; electron 91.7 0.48 1.6E-05 30.3 5.8 32 93-131 2-37 (87)
290 1t1v_A SH3BGRL3, SH3 domain-bi 91.7 0.58 2E-05 30.3 6.3 36 93-131 4-41 (93)
291 3l4n_A Monothiol glutaredoxin- 91.3 0.4 1.4E-05 33.5 5.3 47 93-148 16-62 (127)
292 3gn3_A Putative protein-disulf 91.2 0.15 5E-06 38.0 3.2 43 88-130 13-55 (182)
293 3bci_A Disulfide bond protein 91.0 0.23 7.9E-06 36.7 4.2 44 88-131 10-55 (186)
294 2wci_A Glutaredoxin-4; redox-a 90.7 0.24 8E-06 35.1 3.7 34 91-131 36-73 (135)
295 1z3e_A Regulatory protein SPX; 88.7 0.91 3.1E-05 31.7 5.5 53 93-157 3-55 (132)
296 3zyw_A Glutaredoxin-3; metal b 88.4 0.65 2.2E-05 31.4 4.4 35 89-131 15-54 (111)
297 2h8l_A Protein disulfide-isome 87.5 5.6 0.00019 30.7 10.0 33 191-224 195-229 (252)
298 3gx8_A Monothiol glutaredoxin- 87.1 2 6.9E-05 29.4 6.4 25 90-114 16-44 (121)
299 3gmf_A Protein-disulfide isome 86.9 1.3 4.4E-05 33.5 5.8 45 86-130 12-58 (205)
300 3l78_A Regulatory protein SPX; 85.5 1.6 5.4E-05 29.9 5.2 52 94-157 3-54 (120)
301 3ipz_A Monothiol glutaredoxin- 84.8 1.1 3.7E-05 30.1 4.0 25 100-131 32-56 (109)
302 1nm3_A Protein HI0572; hybrid, 83.7 2.1 7.3E-05 32.8 5.8 23 91-113 170-192 (241)
303 2wem_A Glutaredoxin-related pr 83.1 2.2 7.6E-05 29.1 5.1 23 90-113 20-47 (118)
304 1rw1_A Conserved hypothetical 82.4 0.76 2.6E-05 31.2 2.4 48 94-153 3-50 (114)
305 3fz4_A Putative arsenate reduc 81.6 2.3 8E-05 29.1 4.7 52 94-157 6-57 (120)
306 1u6t_A SH3 domain-binding glut 80.9 7.6 0.00026 26.7 7.1 38 93-131 2-39 (121)
307 3bj5_A Protein disulfide-isome 79.9 13 0.00045 26.1 9.8 34 191-224 91-126 (147)
308 3gkx_A Putative ARSC family re 79.2 2.3 7.7E-05 29.2 4.0 52 94-157 7-58 (120)
309 4f9z_D Endoplasmic reticulum r 78.9 9.7 0.00033 28.7 8.0 34 89-127 27-60 (227)
310 2kok_A Arsenate reductase; bru 78.2 1.2 4E-05 30.6 2.2 49 93-153 7-55 (120)
311 3gmf_A Protein-disulfide isome 77.4 2.3 7.9E-05 32.1 3.9 33 187-225 165-197 (205)
312 1s3c_A Arsenate reductase; ARS 74.8 3 0.0001 29.5 3.7 49 95-155 6-54 (141)
313 2jvx_A NF-kappa-B essential mo 73.8 0.45 1.5E-05 23.8 -0.6 21 100-120 5-25 (28)
314 3ec3_A Protein disulfide-isome 72.3 17 0.00059 27.8 7.9 33 192-225 195-228 (250)
315 3bci_A Disulfide bond protein 72.1 3 0.0001 30.4 3.3 32 187-224 146-177 (186)
316 3rdw_A Putative arsenate reduc 72.0 4.4 0.00015 27.7 3.9 49 94-154 8-56 (121)
317 3ec3_A Protein disulfide-isome 71.8 31 0.0011 26.3 10.7 36 89-128 25-60 (250)
318 3gha_A Disulfide bond formatio 70.9 4.1 0.00014 30.4 3.9 32 187-224 160-191 (202)
319 2r2j_A Thioredoxin domain-cont 69.3 17 0.0006 29.7 7.7 32 191-224 294-328 (382)
320 1pn0_A Phenol 2-monooxygenase; 67.9 67 0.0023 28.6 14.7 38 62-99 478-519 (665)
321 2h8l_A Protein disulfide-isome 65.8 42 0.0014 25.5 10.0 36 89-128 24-59 (252)
322 3ghf_A Septum site-determining 64.5 9.2 0.00031 26.2 4.2 39 87-131 45-83 (120)
323 3t58_A Sulfhydryl oxidase 1; o 64.0 14 0.00049 32.0 6.3 36 187-222 202-237 (519)
324 2g2q_A Glutaredoxin-2; thiored 62.1 7.6 0.00026 26.5 3.3 38 90-132 2-39 (124)
325 2jad_A Yellow fluorescent prot 58.5 3.7 0.00013 34.0 1.5 14 96-109 266-279 (362)
326 3kgk_A Arsenical resistance op 58.4 39 0.0013 22.7 7.5 35 98-132 10-50 (110)
327 3f0i_A Arsenate reductase; str 57.8 3.7 0.00013 28.0 1.2 50 94-155 7-56 (119)
328 1xhj_A Nitrogen fixation prote 57.3 26 0.00088 22.5 5.1 35 77-112 25-59 (88)
329 2x8g_A Thioredoxin glutathione 54.4 12 0.00039 32.9 4.2 21 93-113 20-40 (598)
330 1th5_A NIFU1; iron-sulfur clus 53.7 22 0.00075 22.0 4.2 42 77-119 22-65 (74)
331 3gl5_A Putative DSBA oxidoredu 53.1 19 0.00064 27.6 4.7 42 89-130 1-43 (239)
332 3gl5_A Putative DSBA oxidoredu 51.7 14 0.00048 28.3 3.8 33 187-224 180-212 (239)
333 3ktb_A Arsenical resistance op 51.0 52 0.0018 21.9 9.2 36 97-132 12-53 (106)
334 2dkh_A 3-hydroxybenzoate hydro 50.8 1.3E+02 0.0045 26.5 14.5 145 63-224 467-637 (639)
335 3vhs_A ATPase wrnip1; zinc fin 50.2 1.1 3.8E-05 21.6 -1.7 10 100-109 8-17 (29)
336 3gn3_A Putative protein-disulf 49.5 7.5 0.00026 28.5 1.8 31 187-220 151-181 (182)
337 3mjh_B Early endosome antigen 48.2 2.5 8.5E-05 22.1 -0.7 20 100-119 7-26 (34)
338 2v2f_A Penicillin binding prot 47.1 11 0.00038 17.9 1.7 15 193-207 6-20 (26)
339 3bid_A UPF0339 protein NMB1088 45.1 48 0.0016 19.8 4.9 32 192-223 13-44 (64)
340 3ga8_A HTH-type transcriptiona 41.4 24 0.00083 21.8 3.1 35 86-120 23-64 (78)
341 2wul_A Glutaredoxin related pr 39.8 45 0.0015 22.6 4.4 13 99-111 33-45 (118)
342 1r4w_A Glutathione S-transfera 37.8 18 0.00062 27.2 2.4 34 187-222 179-212 (226)
343 2a4h_A Selenoprotein SEP15; re 36.4 36 0.0012 23.4 3.4 32 191-222 62-94 (126)
344 2imf_A HCCA isomerase, 2-hydro 35.4 21 0.00071 26.3 2.4 27 93-119 3-29 (203)
345 2imf_A HCCA isomerase, 2-hydro 34.4 23 0.00079 26.0 2.5 31 187-223 164-194 (203)
346 4fn4_A Short chain dehydrogena 31.0 37 0.0013 26.3 3.3 11 85-95 3-13 (254)
347 3pdk_A Phosphoglucosamine muta 29.0 1.8E+02 0.0061 24.7 7.4 43 122-167 218-265 (469)
348 3i3w_A Phosphoglucosamine muta 28.6 2E+02 0.007 24.0 7.7 43 122-167 196-243 (443)
349 2k49_A UPF0339 protein SO_3888 28.4 1.1E+02 0.0039 20.6 4.9 32 192-223 66-97 (118)
350 5nul_A Flavodoxin; electron tr 28.3 48 0.0016 22.3 3.2 35 87-126 77-111 (138)
351 3cwf_A Alkaline phosphatase sy 26.4 34 0.0012 22.6 2.1 15 193-207 50-64 (122)
352 4gxt_A A conserved functionall 26.0 2.7E+02 0.0093 22.8 9.2 43 105-156 220-262 (385)
353 1r4w_A Glutathione S-transfera 25.9 31 0.0011 25.8 1.9 36 91-129 6-41 (226)
354 2kii_A Putative uncharacterize 25.4 1.8E+02 0.0061 21.0 6.0 54 64-129 110-163 (181)
355 3l7t_A SMU.1112C, putative unc 25.4 1.4E+02 0.0046 19.1 6.1 26 121-155 80-105 (134)
356 3ihg_A RDME; flavoenzyme, anth 25.3 3.1E+02 0.011 23.2 12.2 113 61-224 418-533 (535)
357 2jwk_A Protein TOLR; periplasm 23.9 1E+02 0.0035 18.1 3.8 32 192-223 4-39 (74)
358 2z51_A NIFU-like protein 2, ch 23.4 1.5E+02 0.0052 21.0 5.1 68 77-148 22-94 (154)
359 3fhk_A UPF0403 protein YPHP; d 23.2 93 0.0032 21.8 3.7 34 190-224 106-143 (147)
360 3pe6_A Monoglyceride lipase; a 23.1 1.9E+02 0.0066 21.1 6.2 61 66-131 13-78 (303)
361 1veh_A NIFU-like protein hirip 22.3 43 0.0015 21.6 1.8 34 78-112 33-66 (92)
362 2k8e_A UPF0339 protein YEGP; p 22.0 1.5E+02 0.005 20.4 4.6 32 192-223 82-113 (130)
363 3fmw_A Oxygenase; mithramycin, 21.9 27 0.00093 30.5 1.0 37 62-98 444-482 (570)
364 2a2p_A Selenoprotein M, SELM p 21.7 97 0.0033 21.4 3.5 32 191-222 56-88 (129)
365 3v67_A Sensor protein CPXA; PA 21.5 53 0.0018 22.9 2.2 16 192-207 56-71 (138)
366 3m2o_A Glyoxalase/bleomycin re 20.4 2.1E+02 0.0073 19.5 6.5 18 193-210 128-145 (164)
367 2k7i_A UPF0339 protein ATU0232 20.0 1.3E+02 0.0043 19.0 3.5 32 192-223 35-66 (83)
No 1
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=221.09 Aligned_cols=163 Identities=50% Similarity=0.869 Sum_probs=141.5
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
....+|+++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++++++|++|.++.+++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~ 100 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGS 100 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred hhccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCC
Confidence 44678999999999999999999999999999999999999999999999999999999989999999999776677778
Q ss_pred HHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCC--CCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHH
Q 027311 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG--GLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEV 218 (225)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~ 218 (225)
.+++++|+ ++++++||++.+.|..+.....+|+.+....+ +..+..+.++|++||||++|+|++++.|..+++++++
T Consensus 101 ~~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 179 (185)
T 2gs3_A 101 NEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEK 179 (185)
T ss_dssp HHHHHHHH-HHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGG
T ss_pred HHHHHHHH-HHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHH
Confidence 99999999 88999999986667777766667766544332 3333347788999999999999999999989999999
Q ss_pred HHHhhh
Q 027311 219 VLECLC 224 (225)
Q Consensus 219 ~l~~ll 224 (225)
.|+++|
T Consensus 180 ~i~~lL 185 (185)
T 2gs3_A 180 DLPHYF 185 (185)
T ss_dssp GHHHHC
T ss_pred HHHHhC
Confidence 999875
No 2
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=2.2e-34 Score=217.55 Aligned_cols=162 Identities=48% Similarity=0.846 Sum_probs=138.8
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
.++|+.+|+|++++.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++++++|++|.++.+++++.+
T Consensus 5 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 84 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEA 84 (169)
T ss_dssp --CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred ccCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHH
Confidence 47899999999999999999999999999999999999999999999999999999998999999999977667778899
Q ss_pred HHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
++++|+.++++++||++.+.|..+......|+++.....+..+..+.++|++||||++|+|++++.|..+++++.+.|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 164 (169)
T 2v1m_A 85 EIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIME 164 (169)
T ss_dssp HHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHH
Confidence 99999337889999998655667666656676654433333332477889999999999999999999899999999999
Q ss_pred hh
Q 027311 223 LC 224 (225)
Q Consensus 223 ll 224 (225)
+|
T Consensus 165 ll 166 (169)
T 2v1m_A 165 LL 166 (169)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 3
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=220.73 Aligned_cols=166 Identities=49% Similarity=0.868 Sum_probs=142.0
Q ss_pred CcccccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCC
Q 027311 58 DHTMASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (225)
Q Consensus 58 ~~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~ 137 (225)
......++|+.+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|++++++|++|++|.++.++
T Consensus 16 ~~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e 95 (183)
T 2obi_A 16 ASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 95 (183)
T ss_dssp ---CCGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred hcccCCcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCC
Confidence 34455689999999999999999999999999999999999999999999999999999999989999999999777777
Q ss_pred CCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCC--CCCCCccccceeEEEECCCCcEEEEcCCCCChhh
Q 027311 138 PGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG--GLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLS 215 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~ 215 (225)
+++.+++++|+ ++++++||++.+.|.++.....+|+.+..... +..+..+.++|++||||++|+|++++.|..++++
T Consensus 96 ~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~ 174 (183)
T 2obi_A 96 PGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLV 174 (183)
T ss_dssp CSCHHHHHHHH-HTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHH
T ss_pred CCCHHHHHHHH-HHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHH
Confidence 78999999999 88999999986557777666667766654332 3333357788999999999999999999988999
Q ss_pred HHHHHHhhh
Q 027311 216 IEVVLECLC 224 (225)
Q Consensus 216 l~~~l~~ll 224 (225)
+++.|+++|
T Consensus 175 l~~~i~~lL 183 (183)
T 2obi_A 175 IEKDLPHYF 183 (183)
T ss_dssp HHTTSGGGC
T ss_pred HHHHHHHhC
Confidence 999988875
No 4
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=100.00 E-value=4.9e-34 Score=223.63 Aligned_cols=162 Identities=39% Similarity=0.643 Sum_probs=138.5
Q ss_pred CCCceecCeEEeCCC-CCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~-G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
..++.+|+|++++++ |+.+++++++||++||+||++|||+|+.++|.|++++++|++++++|++|++|+++.+++++.+
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE 100 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHH
Confidence 567889999999999 9999999999999999999999999999999999999999998999999999977667778899
Q ss_pred HHHHHHH-----hhcCCCcceeeeecCCCCCchhhhhhccccCCCC-------C------------CCccccceeEEEEC
Q 027311 143 QIQEFAC-----TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGL-------F------------GDSIKWNFSKFLVD 198 (225)
Q Consensus 143 ~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~------------~~~v~~~P~~~lid 198 (225)
++++|+. .+++++||++.+.|..+.....+|.++....++. . +.++.++|++||||
T Consensus 101 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID 180 (208)
T 2f8a_A 101 EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG 180 (208)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEc
Confidence 9999994 2899999999766777776656676654322110 0 12578889999999
Q ss_pred CCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 199 KEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 199 ~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
++|+|++++.|..+++++++.|+++|+
T Consensus 181 ~~G~i~~~~~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 181 PDGVPLRRYSRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp TTSCEEEEECTTSCGGGGHHHHHHHHC
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999874
No 5
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=100.00 E-value=9.1e-35 Score=224.11 Aligned_cols=162 Identities=48% Similarity=0.801 Sum_probs=141.9
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
.+..+.++|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|.++.+++++.
T Consensus 19 ~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~ 98 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNE 98 (187)
T ss_dssp -CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBT
T ss_pred hhcCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999998777888899
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccce---eEEEECCCCcEEEEcCCCCChhhHHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF---SKFLVDKEGNVVERYAPTTSPLSIEV 218 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P---~~~lid~~G~I~~~~~g~~~~~~l~~ 218 (225)
+++++|+.++++++||++.+.|..+.....+|.++....++.. ++..+| ++||||++|+|++++.|..+++++++
T Consensus 99 ~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~--~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~ 176 (187)
T 3dwv_A 99 EEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL--ATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEE 176 (187)
T ss_dssp THHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB--SSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHH
T ss_pred HHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCcc--CCCccccceeEEEECCCCCEEEEECCCCCHHHHHH
Confidence 9999998446799999997778888877778877665443333 556677 99999999999999999999999999
Q ss_pred HHHhhhC
Q 027311 219 VLECLCC 225 (225)
Q Consensus 219 ~l~~ll~ 225 (225)
.|+++|+
T Consensus 177 ~i~~lL~ 183 (187)
T 3dwv_A 177 KLIPLLG 183 (187)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 9999874
No 6
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=223.81 Aligned_cols=160 Identities=38% Similarity=0.642 Sum_probs=138.2
Q ss_pred CCCceecCeEEeCCC-CCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~-G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
..+..+|+|+++|++ |+.++|++++||++||+||||||++|+ ++|.|++++++|+++|++||+|++|+++.+++++.+
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~ 108 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK 108 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHH
Confidence 566789999999999 999999999999999999999999999 999999999999999999999999988778888999
Q ss_pred HHHHHHHh------hcCCCcceeeeecCCCCCchhhhhhccccCCC---CC------------CCccccceeEEEECCCC
Q 027311 143 QIQEFACT------RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGG---LF------------GDSIKWNFSKFLVDKEG 201 (225)
Q Consensus 143 ~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~v~~~P~~~lid~~G 201 (225)
++++|+ + +++++||++.+.|..+.....+|+++....++ .. +..+.+.|++||||++|
T Consensus 109 ~i~~f~-~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G 187 (215)
T 2i3y_A 109 EILPGL-KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDG 187 (215)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHH-HhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCC
Confidence 999999 5 89999999977777777666677765432211 11 12466779999999999
Q ss_pred cEEEEcCCCCChhhHHHHHHhhhC
Q 027311 202 NVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 202 ~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
+|++++.|..+++++++.|++||+
T Consensus 188 ~vv~~~~g~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 188 IPVMRWSHRATVSSVKTDILAYLK 211 (215)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHGG
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHH
Confidence 999999998889999999999873
No 7
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=100.00 E-value=6.9e-34 Score=215.02 Aligned_cols=164 Identities=70% Similarity=1.188 Sum_probs=135.1
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
..++|+.+|+|++++.+|+.+++++++||++||+||++||++|+.++|.|+++++++++++++|++|++|.++.+++++.
T Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~ 84 (170)
T 2p5q_A 5 TSKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTN 84 (170)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCH
T ss_pred cCCCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCH
Confidence 34689999999999999999999999999999999999999999999999999999998899999999997777777899
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLE 221 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~ 221 (225)
+++++|+.++++++||++.+.|.++.....+|+.+.....+..+.++.+.|++||||++|+|++++.|..+++++++.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 164 (170)
T 2p5q_A 85 DQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIK 164 (170)
T ss_dssp HHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHH
T ss_pred HHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHH
Confidence 99999994378999999865677777666667654332211111244444499999999999999999999999999999
Q ss_pred hhhC
Q 027311 222 CLCC 225 (225)
Q Consensus 222 ~ll~ 225 (225)
++|+
T Consensus 165 ~ll~ 168 (170)
T 2p5q_A 165 QLLE 168 (170)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9874
No 8
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-34 Score=218.07 Aligned_cols=156 Identities=37% Similarity=0.629 Sum_probs=131.3
Q ss_pred CcccccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCC
Q 027311 58 DHTMASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (225)
Q Consensus 58 ~~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~ 137 (225)
......++|+++|+|++++.+|+.+++++++||++||+||++|||+|+.++|.|++++++|++++++|++|++|.++.++
T Consensus 18 ~~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e 97 (181)
T 2p31_A 18 LYFQSMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQE 97 (181)
T ss_dssp ---------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cccCcCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCC
Confidence 33455689999999999999999999999999999999999999999999999999999999989999999999776677
Q ss_pred CCCHHHHHHHHHhh-cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccce-------eEEEECCCCcEEEEcCC
Q 027311 138 PGDNEQIQEFACTR-FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF-------SKFLVDKEGNVVERYAP 209 (225)
Q Consensus 138 ~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P-------~~~lid~~G~I~~~~~g 209 (225)
+++.+++++|+ ++ ++++||++.+.|.++......|++ .+.++| ++||||++|+|++++.|
T Consensus 98 ~~~~~~~~~~~-~~~~~~~~p~~~~~d~~g~~~~~~~~~-----------~~~~~P~~~~~~~~~~lid~~G~i~~~~~g 165 (181)
T 2p31_A 98 PDSNKEIESFA-RRTYSVSFPMFSKIAVTGTGAHPAFKY-----------LAQTSGKEPTWNFWKYLVAPDGKVVGAWDP 165 (181)
T ss_dssp CSCHHHHHHHH-HHHHCCCSCBBCCCCCSSTTSCHHHHH-----------HHHHHSCCCCSTTCEEEECTTSCEEEEECT
T ss_pred CCCHHHHHHHH-HhhcCCCceeEeecccCCccchhhhhh-----------hhhcCCCccccceeEEEEcCCCCEEEEeCC
Confidence 77899999999 55 899999986666666655555543 455567 99999999999999999
Q ss_pred CCChhhHHHHHHhhhC
Q 027311 210 TTSPLSIEVVLECLCC 225 (225)
Q Consensus 210 ~~~~~~l~~~l~~ll~ 225 (225)
..+++++++.|+++|+
T Consensus 166 ~~~~~~l~~~i~~ll~ 181 (181)
T 2p31_A 166 TVSVEEVRPQITALVR 181 (181)
T ss_dssp TSCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHhC
Confidence 9899999999999885
No 9
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=219.42 Aligned_cols=159 Identities=36% Similarity=0.612 Sum_probs=134.8
Q ss_pred CCCceecCeEEeCCC-CCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~-G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
.....+|+|+++|++ |+.++|++++||++||+||+|||++| .++|.|++++++|+++|++||+|++|+++.+++++.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 345689999999999 99999999999999999999999999 7999999999999999999999999987777888899
Q ss_pred HHHHHHHh------hcCCCcceeeeecCCCCCchhhhhhccccCCC---CC------------CCccccceeEEEECCCC
Q 027311 143 QIQEFACT------RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGG---LF------------GDSIKWNFSKFLVDKEG 201 (225)
Q Consensus 143 ~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~v~~~P~~~lid~~G 201 (225)
++++|+ + +++++||++.+.|..+.....+|+++....++ .. +..+.+.|++||||++|
T Consensus 91 ~i~~f~-~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G 169 (207)
T 2r37_A 91 EILPTL-KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDG 169 (207)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHH-HhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCC
Confidence 999999 6 89999999976676777666677765432211 11 12466779999999999
Q ss_pred cEEEEcCCCCChhhHHHHHHhhh
Q 027311 202 NVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 202 ~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
+|++++.|..+++++++.|+++|
T Consensus 170 ~i~~~~~g~~~~~~l~~~I~~ll 192 (207)
T 2r37_A 170 IPIMRWHHRTTVSNVKMDILSYM 192 (207)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999888999999999887
No 10
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=100.00 E-value=2.5e-33 Score=214.69 Aligned_cols=153 Identities=39% Similarity=0.681 Sum_probs=133.7
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
..+|..+|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|++++++|++|++|.++..++++.+
T Consensus 12 ~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~ 91 (180)
T 3kij_A 12 KPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSK 91 (180)
T ss_dssp CCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHH
T ss_pred cCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999988878888999
Q ss_pred HHHHHHHhh-cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCcccccee----EEEECCCCcEEEEcCCCCChhhHH
Q 027311 143 QIQEFACTR-FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFS----KFLVDKEGNVVERYAPTTSPLSIE 217 (225)
Q Consensus 143 ~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~----~~lid~~G~I~~~~~g~~~~~~l~ 217 (225)
++++|+ ++ ++++||++.+.|..+......|.++... ..++|+ +||||++|+|++++.|..++++++
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 162 (180)
T 3kij_A 92 EVESFA-RKNYGVTFPIFHKIKILGSEGEPAFRFLVDS--------SKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIR 162 (180)
T ss_dssp HHHHHH-HHHHCCCSCBBCCCCCSSTTCCHHHHHHHHH--------HTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTH
T ss_pred HHHHHH-HHhcCCCCceeeeeeccCccccHHHHHHHhc--------CCCCccccceEEEECCCCCEEEEECCCCCHHHHH
Confidence 999999 66 9999999876666666655566554321 223566 999999999999999999998888
Q ss_pred HHHHhhh
Q 027311 218 VVLECLC 224 (225)
Q Consensus 218 ~~l~~ll 224 (225)
+.|+++|
T Consensus 163 ~~i~~lL 169 (180)
T 3kij_A 163 PDIAALV 169 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888776
No 11
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=2.1e-32 Score=211.34 Aligned_cols=158 Identities=49% Similarity=0.831 Sum_probs=135.4
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
..+.|+.+|+|+++|.+|+.+++++++||++||+||++||++|+.+++.|++++++|++++++|++|++|.++.+++++.
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~ 100 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNE 100 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCH
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCH
Confidence 35789999999999999999999999999999999999999999999999999999999899999999997777778889
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccce------eEEEECCCCcEEEEcCCCCChhh
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF------SKFLVDKEGNVVERYAPTTSPLS 215 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P------~~~lid~~G~I~~~~~g~~~~~~ 215 (225)
+++++|+.++++++||++.+.|..+.....+|+.+.... +++.++| ++||||++|+|++++.|..++++
T Consensus 101 ~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~-----~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~ 175 (190)
T 2vup_A 101 EEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTK-----PGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKD 175 (190)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHS-----CCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHH
T ss_pred HHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhc-----CCcCCCccccccceEEEECCCCcEEEEECCCCCHHH
Confidence 999999845779999998666777776665666543322 1455556 99999999999999999999999
Q ss_pred HHHHHHhhh
Q 027311 216 IEVVLECLC 224 (225)
Q Consensus 216 l~~~l~~ll 224 (225)
+.+.|+++|
T Consensus 176 l~~~i~~ll 184 (190)
T 2vup_A 176 IEKKLIPLL 184 (190)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999987
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4e-32 Score=206.15 Aligned_cols=155 Identities=46% Similarity=0.790 Sum_probs=118.5
Q ss_pred CCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHH
Q 027311 65 SKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI 144 (225)
Q Consensus 65 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~ 144 (225)
.+..+|+|+++|.+|+.+++++++||++||+||++||++|+ ++|.|++++++|++++++|++|++|.++.+++++.+++
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred chhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 46788999999999999999999999999999999999999 99999999999999899999999986666666788888
Q ss_pred HHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccce------eEEEECCCCcEEEEcCCCCChhhHHH
Q 027311 145 QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNF------SKFLVDKEGNVVERYAPTTSPLSIEV 218 (225)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P------~~~lid~~G~I~~~~~g~~~~~~l~~ 218 (225)
++|++++++++||++.+.|..+....+.|+.+.... +++.++| ++||||++|+|++++.|..+++++++
T Consensus 87 ~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~-----~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 161 (171)
T 3cmi_A 87 AQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQK-----SGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSE 161 (171)
T ss_dssp --------CCCSCBBCCCBSSSTTBCHHHHHHHHHS-----CCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHH
T ss_pred HHHHHhccCCCceEEeeccCCCccchHHHHHHHhcc-----CCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 988746779999999666666666666665543221 2667778 99999999999999999889999999
Q ss_pred HHHhhhC
Q 027311 219 VLECLCC 225 (225)
Q Consensus 219 ~l~~ll~ 225 (225)
.|+++|+
T Consensus 162 ~i~~ll~ 168 (171)
T 3cmi_A 162 TIEELLK 168 (171)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999874
No 13
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.97 E-value=2.3e-31 Score=198.89 Aligned_cols=144 Identities=17% Similarity=0.281 Sum_probs=124.8
Q ss_pred CCceecCeEEeCC--CCCeecCCccCCCEEEEEEcccCCCCChHh-HHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 65 SKTSVHDFSVKDA--KGQDVDLSIYKGKLLLIVNVASQCGLTNSN-YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 65 ~g~~~p~f~l~~~--~G~~~~l~~~~gk~vlv~F~~twC~~C~~~-~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
+|+++|+|++.+. +|+.+++++++||++||+||++||++|+.+ +|.|++++++|+++++.+++|++| +...+.++.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 80 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV-FEHHEAMTP 80 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec-ccccccCCH
Confidence 6899999999994 889999999999999999999999999997 999999999999888999999987 222234588
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCC----CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGD----NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIE 217 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~ 217 (225)
+.+++|+ ++++++||++. |..+. ...+.| ++.++|++||||++|+|++++.|..+.++++
T Consensus 81 ~~~~~~~-~~~~~~~~~~~--d~~~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 144 (158)
T 3eyt_A 81 ISLKAFL-HEYRIKFPVGV--DQPGDGAMPRTMAAY-------------QMRGTPSLLLIDKAGDLRAHHFGDVSELLLG 144 (158)
T ss_dssp HHHHHHH-HHTTCCSCEEE--ECCCSSSSCHHHHHT-------------TCCSSSEEEEECTTSEEEEEEESCCCHHHHH
T ss_pred HHHHHHH-HHcCCCceEEE--cCccchhhHHHHHHc-------------CCCCCCEEEEECCCCCEEEEEeCCCCHHHHH
Confidence 9999999 88999999884 44442 123333 8889999999999999999999999999999
Q ss_pred HHHHhhhC
Q 027311 218 VVLECLCC 225 (225)
Q Consensus 218 ~~l~~ll~ 225 (225)
+.|+++|+
T Consensus 145 ~~i~~ll~ 152 (158)
T 3eyt_A 145 AEIATLLG 152 (158)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999874
No 14
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.97 E-value=1.9e-31 Score=196.46 Aligned_cols=136 Identities=13% Similarity=0.213 Sum_probs=111.4
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
....+|+.+|+|++ +.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++++++|++|. +
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~-------~ 76 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDE-------K 76 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCS-------C
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccC-------C
Confidence 34689999999999 999999999999999999999999999999999999999999998899999999985 6
Q ss_pred HHHHHHHHHhhcCCCc-ceeeeecCCC--CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 027311 141 NEQIQEFACTRFKAEF-PIFDKVDVNG--DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIE 217 (225)
Q Consensus 141 ~~~~~~~~~~~~~~~~-~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~ 217 (225)
.+++++++ ++++++| +.+. |..+ ....+.| ++.++|++||||++|+|++++.+ .++++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~--d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~---~~~l~ 137 (143)
T 4fo5_A 77 ESIFTETV-KIDKLDLSTQFH--EGLGKESELYKKY-------------DLRKGFKNFLINDEGVIIAANVT---PEKLT 137 (143)
T ss_dssp HHHHHHHH-HHHTCCGGGEEE--CTTGGGSHHHHHT-------------TGGGCCCEEEECTTSBEEEESCC---HHHHH
T ss_pred HHHHHHHH-HHhCCCCceeee--cccccchHHHHHc-------------CCCCCCcEEEECCCCEEEEccCC---HHHHH
Confidence 78899998 7889999 6663 3332 2233333 88899999999999999999765 77888
Q ss_pred HHHHhh
Q 027311 218 VVLECL 223 (225)
Q Consensus 218 ~~l~~l 223 (225)
+.|+++
T Consensus 138 ~~l~~i 143 (143)
T 4fo5_A 138 EILKAI 143 (143)
T ss_dssp HHHTC-
T ss_pred HHHHhC
Confidence 877654
No 15
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=1.6e-31 Score=200.46 Aligned_cols=148 Identities=21% Similarity=0.273 Sum_probs=113.9
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
.+++|+++|+|+++|.+|+.++|++++||++||+|| ++|||+|+.++|.|++++++++++++++++||.| +
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~ 74 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------P 74 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------C
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------c
Confidence 358999999999999999999999999999999999 9999999999999999999999999999999988 7
Q ss_pred HHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC-----CCChhh
Q 027311 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP-----TTSPLS 215 (225)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g-----~~~~~~ 215 (225)
.+.+++|+ ++++++||++. |.++. ..+.|+..... ++..+ .....|++||||++|+|++++.+ +.+.++
T Consensus 75 ~~~~~~~~-~~~~~~~p~l~--D~~~~-v~~~ygv~~~~-~~~~~-~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~e 148 (157)
T 4g2e_A 75 PFSNKAFK-EHNKLNFTILS--DYNRE-VVKKYNVAWEF-PALPG-YVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDE 148 (157)
T ss_dssp HHHHHHHH-HHTTCCSEEEE--CTTSH-HHHHTTCEEEC-TTSTT-CEEECEEEEEECTTSBEEEEEEESSTTCCCCHHH
T ss_pred hhHHHHHH-HHcCCcEEEEE--cCCcH-HHHHcCCcccc-ccCCC-cceeeeeEEEECCCCEEEEEEECCCCCCCCCHHH
Confidence 88899998 88899999984 54443 44455433221 11222 23457999999999999988654 334567
Q ss_pred HHHHHHhh
Q 027311 216 IEVVLECL 223 (225)
Q Consensus 216 l~~~l~~l 223 (225)
+.+.|++|
T Consensus 149 il~~l~~L 156 (157)
T 4g2e_A 149 IEKVVKSL 156 (157)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 87777765
No 16
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.3e-30 Score=193.51 Aligned_cols=138 Identities=24% Similarity=0.301 Sum_probs=121.0
Q ss_pred ccCCCceecCeEEeCCCCCeecCC--ccCCCEEEEEEcccCCCC--ChHhHHHHHHHHHHH-hcCCeEEEEEecCCCCCC
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLS--IYKGKLLLIVNVASQCGL--TNSNYTELSQLYDKY-KNQGLEILAFPCNQFGAQ 136 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~--~~~gk~vlv~F~~twC~~--C~~~~~~l~~l~~~~-~~~~~~iv~Is~d~~~~~ 136 (225)
.+.+|+++|+|++++.+|+.++++ +++||++||+||++||++ |+.++|.|++++++| +++++++++|++|.
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~---- 79 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV---- 79 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS----
T ss_pred cccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC----
Confidence 457999999999999999999999 999999999999999999 999999999999999 88889999999985
Q ss_pred CCCCHHHHHHHHHhhcCCCcceeeeecCC--CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChh
Q 027311 137 EPGDNEQIQEFACTRFKAEFPIFDKVDVN--GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPL 214 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~ 214 (225)
+.+.+++|+ ++++++|+++. |.. .....+.| ++.++|++||||++|+|++++. +.+
T Consensus 80 ---~~~~~~~~~-~~~~~~~~~~~--d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~---~~~ 137 (150)
T 3fw2_A 80 ---DKQQWKDAI-KRDTLDWEQVC--DFGGLNSEVAKQY-------------SIYKIPANILLSSDGKILAKNL---RGE 137 (150)
T ss_dssp ---CHHHHHHHH-HHTTCCSEEEC--CSCGGGCHHHHHT-------------TCCSSSEEEEECTTSBEEEESC---CHH
T ss_pred ---CHHHHHHHH-HHhCCCceEEE--cCcccchHHHHHc-------------CCCccCeEEEECCCCEEEEccC---CHH
Confidence 678999998 88899999984 432 22333333 8889999999999999999985 588
Q ss_pred hHHHHHHhhhC
Q 027311 215 SIEVVLECLCC 225 (225)
Q Consensus 215 ~l~~~l~~ll~ 225 (225)
++++.|+++++
T Consensus 138 ~l~~~l~~ll~ 148 (150)
T 3fw2_A 138 ELKKKIENIVE 148 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 89999998873
No 17
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.97 E-value=8.3e-31 Score=196.11 Aligned_cols=150 Identities=12% Similarity=0.240 Sum_probs=126.3
Q ss_pred CCCceecCeEEeC-CCCCeecCCccCCCEEEEEEcccCCCCChHh-HHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 64 QSKTSVHDFSVKD-AKGQDVDLSIYKGKLLLIVNVASQCGLTNSN-YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 64 ~~g~~~p~f~l~~-~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~-~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
-.|.++|+|++.+ .+|+.+++++++||++||+||++||++|+.+ +|.|++++++|+++++.+++|++| +...+.++.
T Consensus 4 ~~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 82 (160)
T 3lor_A 4 LDNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTP 82 (160)
T ss_dssp CTTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred cCCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCH
Confidence 3689999999999 8999999999999999999999999999996 999999999999889999999986 333334589
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLE 221 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~ 221 (225)
+.+++|+ ++++++||++.+.+........+.+.+ ++.++|++||||++|+|++++.|..+.+++++.|+
T Consensus 83 ~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 151 (160)
T 3lor_A 83 EALKVFI-DEFGIKFPVAVDMPREGQRIPSTMKKY----------RLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLG 151 (160)
T ss_dssp HHHHHHH-HHTTCCSCEEEECCCTTCSSCHHHHHT----------TCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCCcEEECCccccchhhhHHHhc----------ccCccceEEEECCCCcEEEEecCcCCHHHHHHHHH
Confidence 9999999 889999998853332222211122221 88899999999999999999999999999999999
Q ss_pred hhhC
Q 027311 222 CLCC 225 (225)
Q Consensus 222 ~ll~ 225 (225)
++|+
T Consensus 152 ~ll~ 155 (160)
T 3lor_A 152 SLLS 155 (160)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9874
No 18
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.97 E-value=1.6e-30 Score=191.00 Aligned_cols=135 Identities=17% Similarity=0.215 Sum_probs=116.6
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHH---HHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQ---LYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~---l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
++|+++|+|++++.+|+.+++++++||++||+||++||++|+.++|.+.+ ++++++++++++++|++|. +
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~-------~ 74 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE-------N 74 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS-------C
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC-------C
Confidence 58999999999999999999999999999999999999999999999998 9999998899999999985 7
Q ss_pred HHHHHHHHHhhcCCCcceeeeecCCCCCc-hhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHH
Q 027311 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNA-APLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVV 219 (225)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (225)
.+.+++|+ ++++.+|+++ .|..+... .+.| ++.++|++||||++|+|+++ ..+.+++++.
T Consensus 75 ~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~ 135 (142)
T 3ewl_A 75 REEWATKA-VYMPQGWIVG--WNKAGDIRTRQLY-------------DIRATPTIYLLDGRKRVILK---DTSMEQLIDY 135 (142)
T ss_dssp HHHHHHHH-TTSCTTCEEE--ECTTCHHHHTTCS-------------CCCSSSEEEEECTTCBEEEC---SCCHHHHHHH
T ss_pred HHHHHHHH-HHcCCCccee--eCCccchhhHHHc-------------CCCCCCeEEEECCCCCEEec---CCCHHHHHHH
Confidence 88899998 8899999988 45443321 1123 88999999999999999884 3568899999
Q ss_pred HHhhh
Q 027311 220 LECLC 224 (225)
Q Consensus 220 l~~ll 224 (225)
|+++.
T Consensus 136 l~~~~ 140 (142)
T 3ewl_A 136 LATQA 140 (142)
T ss_dssp HHC--
T ss_pred HHHHc
Confidence 98775
No 19
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.97 E-value=7.2e-30 Score=193.86 Aligned_cols=158 Identities=15% Similarity=0.251 Sum_probs=122.3
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCC-CChHhHHHHHHHHHHHhcC--CeEEEEEecCCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCG-LTNSNYTELSQLYDKYKNQ--GLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~-~C~~~~~~l~~l~~~~~~~--~~~iv~Is~d~~~~~~~~ 139 (225)
..+|.++|+|+++|++|+.+++++++||++||+||+|||| +|..+++.|.+++++++++ ++++|+||+| ++.|
T Consensus 6 ~P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD----p~~D 81 (170)
T 4hde_A 6 KPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD----PDLD 81 (170)
T ss_dssp SCCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTC
T ss_pred cCCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC----cccc
Confidence 3578999999999999999999999999999999999998 8999999999999999765 4899999998 5778
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecC-CCCCchhhhhh-ccccCCCCCCCccccceeEEEECCCCcEEEEcCCC--CChhh
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDV-NGDNAAPLYKH-LKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT--TSPLS 215 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~-~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~--~~~~~ 215 (225)
+++.+++|+ ++++.+++.+..... ..+.....+.. .........++.+.|.|++||||++|+|+.++.|. .+.++
T Consensus 82 tp~~l~~y~-~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~ 160 (170)
T 4hde_A 82 KPENLKAFI-QKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYED 160 (170)
T ss_dssp CHHHHHHHH-TTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHH
T ss_pred cHHHHHHHH-HHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHH
Confidence 999999999 888887765432211 11112222211 11111122234788899999999999999988764 34578
Q ss_pred HHHHHHhhhC
Q 027311 216 IEVVLECLCC 225 (225)
Q Consensus 216 l~~~l~~ll~ 225 (225)
+.+.|++|++
T Consensus 161 l~~~ik~Lle 170 (170)
T 4hde_A 161 IIRDMKRLAE 170 (170)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 20
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.97 E-value=4.3e-30 Score=188.92 Aligned_cols=133 Identities=16% Similarity=0.178 Sum_probs=114.6
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHH---HHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQ---LYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~---l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
..+|+++|+|++++.+|+.+++++++||++||+||++||++|+.++|.|++ ++++++++++++++|+.|.
T Consensus 5 ~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~------- 77 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDE------- 77 (142)
T ss_dssp TCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSS-------
T ss_pred hcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCC-------
Confidence 478999999999999999999999999999999999999999999999999 9999998899999999985
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCC-CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHH
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGD-NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEV 218 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~ 218 (225)
+.+.+++++ ++++.+|+.. .|..+. .....| ++.++|++||||++|+|+++..+ .+++++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~---~~~l~~ 138 (142)
T 3eur_A 78 ELDEWKKHR-NDFAKEWTNG--YDKELVIKNKNLY-------------DLRAIPTLYLLDKNKTVLLKDAT---LQKVEQ 138 (142)
T ss_dssp CHHHHHHHG-GGSCTTSEEE--ECTTCHHHHTTCS-------------CCTTCSEEEEECTTCBEEEEEEC---HHHHHH
T ss_pred CHHHHHHHH-Hhcccccccc--cCccchhhhhhhc-------------CCCcCCeEEEECCCCcEEecCCC---HHHHHH
Confidence 778888888 7888888876 443332 012222 88899999999999999999876 677877
Q ss_pred HHH
Q 027311 219 VLE 221 (225)
Q Consensus 219 ~l~ 221 (225)
.|+
T Consensus 139 ~l~ 141 (142)
T 3eur_A 139 YLA 141 (142)
T ss_dssp HHH
T ss_pred HHh
Confidence 775
No 21
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.97 E-value=6.7e-30 Score=190.01 Aligned_cols=139 Identities=19% Similarity=0.214 Sum_probs=118.6
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
..+|+++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++++++|++|. +.+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~-------~~~ 75 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR-------REE 75 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS-------CHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC-------CHH
Confidence 4789999999999999999999999999999999999999999999999999999998899999999985 778
Q ss_pred HHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
++++++ ++++.+|+++.+.........+.| ++.++|+++|||++|+|++++. +.+++++.|++
T Consensus 76 ~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 138 (152)
T 2lrn_A 76 DWKKAI-EEDKSYWNQVLLQKDDVKDVLESY-------------CIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEK 138 (152)
T ss_dssp HHHHHH-HHHTCCSEEEEECHHHHHHHHHHT-------------TCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHH
T ss_pred HHHHHH-HHhCCCCeEEecccchhHHHHHHh-------------CCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHH
Confidence 899998 778999998843210012222233 8888999999999999999974 36789999988
Q ss_pred hhC
Q 027311 223 LCC 225 (225)
Q Consensus 223 ll~ 225 (225)
+++
T Consensus 139 l~~ 141 (152)
T 2lrn_A 139 FVN 141 (152)
T ss_dssp HHT
T ss_pred HHh
Confidence 863
No 22
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.97 E-value=1.1e-29 Score=192.74 Aligned_cols=157 Identities=18% Similarity=0.315 Sum_probs=124.0
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCC-CChHhHHHHHHHHHHHhcCC--eEEEEEecCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCG-LTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQE 137 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~-~C~~~~~~l~~l~~~~~~~~--~~iv~Is~d~~~~~~ 137 (225)
....+|+.+|+|++++.+|+.+++++++||++||+||++||+ +|+.+++.|+++++++++++ ++|++|++|. +
T Consensus 5 ~~l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~----~ 80 (174)
T 1xzo_A 5 IKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP----E 80 (174)
T ss_dssp CCSCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT----T
T ss_pred CcCccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC----C
Confidence 345799999999999999999999999999999999999999 99999999999999999876 9999999982 4
Q ss_pred CCCHHHHHHHHHhhcCCCc---ceeeeecCCCCCchhhhhh--cccc-CCCCCCCccccceeEEEECCCCcEEEEcCCCC
Q 027311 138 PGDNEQIQEFACTRFKAEF---PIFDKVDVNGDNAAPLYKH--LKSS-KGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~--~~~~-~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~ 211 (225)
.++.+.+++|+ ++++++| +++ .|.+... .+.|.. +... .....++++.++|++||||++|+|++++.|..
T Consensus 81 ~d~~~~~~~~~-~~~~~~~~~~~~l--~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~ 156 (174)
T 1xzo_A 81 NDKPKQLKKFA-ANYPLSFDNWDFL--TGYSQSE-IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVE 156 (174)
T ss_dssp TCCHHHHHHHH-TTSCCCGGGEEEE--BCSCHHH-HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSS
T ss_pred CCCHHHHHHHH-HHcCCCCcceEEE--eCCCHHH-HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCC
Confidence 45889999998 8889999 554 2322221 122221 0000 00111236788999999999999999998876
Q ss_pred --ChhhHHHHHHhhhC
Q 027311 212 --SPLSIEVVLECLCC 225 (225)
Q Consensus 212 --~~~~l~~~l~~ll~ 225 (225)
+.+++.+.|++|++
T Consensus 157 ~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 157 NTPYDDIISDVKSAST 172 (174)
T ss_dssp SCCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHh
Confidence 46889999999874
No 23
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.97 E-value=2.2e-29 Score=185.63 Aligned_cols=138 Identities=21% Similarity=0.267 Sum_probs=120.3
Q ss_pred ccCCCceecCeEEeCCCCCeecCC--ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHH-hcCCeEEEEEecCCCCCCCC
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLS--IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKY-KNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~--~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~-~~~~~~iv~Is~d~~~~~~~ 138 (225)
...+|+++|+|++.+.+|+.++++ +++||++||+||++||++|+.+++.++++++++ +++++.+++|++|.
T Consensus 4 ~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~------ 77 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDI------ 77 (148)
T ss_dssp -CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCS------
T ss_pred cccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCC------
Confidence 457999999999999999999999 999999999999999999999999999999999 88889999999985
Q ss_pred CCHHHHHHHHHhhcCCCcceeeeecCC--CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhH
Q 027311 139 GDNEQIQEFACTRFKAEFPIFDKVDVN--GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSI 216 (225)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l 216 (225)
+.+.+++++ ++++++|+++. |.. .......| ++.++|+++|+|++|+|++++. +.+++
T Consensus 78 -~~~~~~~~~-~~~~~~~~~~~--d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~---~~~~l 137 (148)
T 3fkf_A 78 -DREAWETAI-KKDTLSWDQVC--DFTGLSSETAKQY-------------AILTLPTNILLSPTGKILARDI---QGEAL 137 (148)
T ss_dssp -CHHHHHHHH-HHTTCCSEEEC--CSCGGGCHHHHHT-------------TCCSSSEEEEECTTSBEEEESC---CHHHH
T ss_pred -CHHHHHHHH-HHcCCCceEEE--ccCCcchHHHHhc-------------CCCCcCEEEEECCCCeEEEecC---CHHHH
Confidence 678999998 88899999884 332 22233333 8889999999999999999976 68899
Q ss_pred HHHHHhhhC
Q 027311 217 EVVLECLCC 225 (225)
Q Consensus 217 ~~~l~~ll~ 225 (225)
++.|+++|+
T Consensus 138 ~~~l~~ll~ 146 (148)
T 3fkf_A 138 TGKLKELLK 146 (148)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHc
Confidence 999999874
No 24
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.96 E-value=1.3e-29 Score=188.09 Aligned_cols=138 Identities=21% Similarity=0.390 Sum_probs=122.5
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHH
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~ 143 (225)
++|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. +.+.
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~-------~~~~ 73 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGE-------SKIA 73 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC-------CHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------CHHH
Confidence 368999999999999999999999999999999999999999999999999999998889999999985 6788
Q ss_pred HHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
+++|+ ++++++|+++. |.... ..+.| ++.++|+++|||++|++++++.|..+.+++.+.|+++
T Consensus 74 ~~~~~-~~~~~~~~~~~--d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 74 VHNFM-KSYGVNFPVVL--DTDRQ-VLDAY-------------DVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp HHHHH-HHHTCCSCEEE--ETTSH-HHHHT-------------TCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHH-HHcCCCceEEE--CCchH-HHHhc-------------CCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 99998 78899999884 43322 33333 8889999999999999999999998999999999998
Q ss_pred hC
Q 027311 224 CC 225 (225)
Q Consensus 224 l~ 225 (225)
++
T Consensus 137 l~ 138 (151)
T 2f9s_A 137 KP 138 (151)
T ss_dssp SC
T ss_pred Hh
Confidence 74
No 25
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=9.2e-30 Score=200.69 Aligned_cols=148 Identities=20% Similarity=0.286 Sum_probs=126.3
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCC-EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGK-LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk-~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
..+++|+++|+|++++.+|+.+++++++|| ++||+||++||++|+.+++.|++++++|++++++|++|++|+....+++
T Consensus 30 ~~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred CcCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 456899999999999999999999999999 5999999999999999999999999999999999999999864444446
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcC---------CC
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYA---------PT 210 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~---------g~ 210 (225)
+.+.+++|+ ++++++||++. |..+ ...+.| ++.++|++||||++|+|+++.. +.
T Consensus 110 ~~~~~~~~~-~~~~~~~~~l~--D~~~-~~~~~~-------------~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~ 172 (218)
T 3u5r_E 110 TLERVGAEV-KAYGYGFPYLK--DASQ-SVAKAY-------------GAACTPDFFLYDRERRLVYHGQFDDARPGNGKD 172 (218)
T ss_dssp SHHHHHHHH-HHHTCCSCEEE--CTTC-HHHHHH-------------TCCEESEEEEECTTCBEEEEECSSSCCTTSCCC
T ss_pred CHHHHHHHH-HHhCCCccEEE--CCcc-HHHHHc-------------CCCCCCeEEEECCCCcEEEeccccccccccccc
Confidence 999999999 78899999984 4333 344445 8888999999999999998743 23
Q ss_pred CChhhHHHHHHhhhC
Q 027311 211 TSPLSIEVVLECLCC 225 (225)
Q Consensus 211 ~~~~~l~~~l~~ll~ 225 (225)
.+.+++++.|+++++
T Consensus 173 ~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 173 VTGADLRAAVDAVLK 187 (218)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHc
Confidence 456789999999873
No 26
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.96 E-value=2.8e-29 Score=192.29 Aligned_cols=143 Identities=13% Similarity=0.184 Sum_probs=124.2
Q ss_pred ccCCCceecCeEEeCC--CCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCe------EEEEEecCCC
Q 027311 62 ASQSKTSVHDFSVKDA--KGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGL------EILAFPCNQF 133 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~--~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~------~iv~Is~d~~ 133 (225)
...+|+++|+|+++++ +|+.+++++++||++||+||++||++|+.+++.|++++++|+++++ ++++|++|.
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~- 108 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD- 108 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC-
T ss_pred ccccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC-
Confidence 4578999999999999 9999999999999999999999999999999999999999999888 999999873
Q ss_pred CCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCCh
Q 027311 134 GAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP 213 (225)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~ 213 (225)
++.+.+++|+ ++++++||++ .|..+.. ...|+. +++.++|++||||++|+|++++.|..+.
T Consensus 109 -----~~~~~~~~~~-~~~~~~~~~~--~d~~~~~-~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~ 169 (183)
T 3lwa_A 109 -----YSRDIAQDFV-TDNGLDYPSI--YDPPFMT-AASLGG----------VPASVIPTTIVLDKQHRPAAVFLREVTS 169 (183)
T ss_dssp -----CCHHHHHHHH-HHTTCCSCEE--ECTTCGG-GGGTTT----------CCTTCCSEEEEECTTSCEEEEECSCCCH
T ss_pred -----CCHHHHHHHH-HHcCCCccEE--ECCcchH-HHHhcc----------CCCCCCCeEEEECCCCcEEEEEcCCCCH
Confidence 2578889998 8889999998 4544433 222311 2688899999999999999999999999
Q ss_pred hhHHHHHHhhh
Q 027311 214 LSIEVVLECLC 224 (225)
Q Consensus 214 ~~l~~~l~~ll 224 (225)
+++.+.|++++
T Consensus 170 ~~l~~~l~~ll 180 (183)
T 3lwa_A 170 KDVLDVALPLV 180 (183)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999987
No 27
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.96 E-value=8.6e-31 Score=197.85 Aligned_cols=147 Identities=14% Similarity=0.241 Sum_probs=119.0
Q ss_pred cCCCceecCeEEeCCCCCeecCCcc--CCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIY--KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
+++|+++|+|++.|.+|+.++|+++ +||++||+|| ++|||+|+.+++.|++++++|+++|+++++||.|
T Consensus 5 l~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d-------- 76 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD-------- 76 (164)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS--------
T ss_pred ccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC--------
Confidence 4799999999999999999999998 8999999888 9999999999999999999999999999999987
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC-----CChh
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-----TSPL 214 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~-----~~~~ 214 (225)
+.+.+++|. ++++++||++. |.++. ..+.|+.......+. .....|++||||++|+|++++.+. .+.+
T Consensus 77 ~~~~~~~~~-~~~~~~fp~l~--D~~~~-v~~~ygv~~~~~~~~---~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~ 149 (164)
T 4gqc_A 77 SPWCLKKFK-DENRLAFNLLS--DYNRE-VIKLYNVYHEDLKGL---KMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYD 149 (164)
T ss_dssp CHHHHHHHH-HHTTCCSEEEE--CTTSH-HHHHTTCEEEEETTE---EEEECCEEEEECTTSBEEEEEECSCTTCCCCHH
T ss_pred CHHHHHHHH-HhcCcccceee--cCchH-HHHHcCCcccccccC---cCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHH
Confidence 788999998 88999999984 54443 445565433221111 223568999999999999986543 3456
Q ss_pred hHHHHHHhhh
Q 027311 215 SIEVVLECLC 224 (225)
Q Consensus 215 ~l~~~l~~ll 224 (225)
++.+.|++|.
T Consensus 150 eil~~l~~l~ 159 (164)
T 4gqc_A 150 EVVREANKIA 159 (164)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777777664
No 28
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.96 E-value=2.8e-29 Score=188.68 Aligned_cols=124 Identities=18% Similarity=0.295 Sum_probs=109.6
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCE-EEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKL-LLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~-vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
+.+|+++|+|++++.+|+.+++++++||+ +||+|| ++||++|+.+++.|++++++|+++|+++++|++| +
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~ 73 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------D 73 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------C
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------C
Confidence 36899999999999999999999999997 999999 9999999999999999999999999999999997 7
Q ss_pred HHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCcccc----ceeEEEECCCCcEEEEcCCCC
Q 027311 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKW----NFSKFLVDKEGNVVERYAPTT 211 (225)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~----~P~~~lid~~G~I~~~~~g~~ 211 (225)
.+.+++|+ ++++++|+++. |.+ ....+.| ++.+ +|++||||++|+|++++.|..
T Consensus 74 ~~~~~~~~-~~~~~~~~~~~--d~~-~~~~~~~-------------~v~~~~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 74 INSHKRFK-EKYKLPFILVS--DPD-KKIRELY-------------GAKGFILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp HHHHHHHH-HHTTCCSEEEE--CTT-SHHHHHT-------------TCCCSSSCCCEEEEECTTSBEEEEEECSS
T ss_pred HHHHHHHH-HHhCCCceEEE--CCc-HHHHHHc-------------CCCCcCcccceEEEECCCCEEEEEEecCC
Confidence 89999999 88899999984 433 2333444 5556 899999999999999999844
No 29
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.96 E-value=2.2e-29 Score=189.33 Aligned_cols=148 Identities=16% Similarity=0.276 Sum_probs=116.7
Q ss_pred cCCCceecCeE--EeCCCCCeecCCccCCCEEEEEEcc-cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 63 SQSKTSVHDFS--VKDAKGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 63 ~~~g~~~p~f~--l~~~~G~~~~l~~~~gk~vlv~F~~-twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
+.+|+++|+|+ +++.+|+++++++++||++||+||+ +||++|+.+++.|++++++|+++|++|++|++|
T Consensus 7 l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d-------- 78 (163)
T 3gkn_A 7 AVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD-------- 78 (163)
T ss_dssp CCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS--------
T ss_pred cccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC--------
Confidence 57999999999 9999999999999999999999997 999999999999999999999999999999998
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCC-CccccceeEEEECCCCcEEEEcCCCCCh---hh
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFG-DSIKWNFSKFLVDKEGNVVERYAPTTSP---LS 215 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~v~~~P~~~lid~~G~I~~~~~g~~~~---~~ 215 (225)
+.+.+++|+ ++++.+||++. |.++ ...+.|+....... .| .....+|++||||++|+|++.+.+.... ++
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~~--d~~~-~~~~~~~v~~~~~~--~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~ 152 (163)
T 3gkn_A 79 SVKSHDNFC-AKQGFAFPLVS--DGDE-ALCRAFDVIKEKNM--YGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADA 152 (163)
T ss_dssp CHHHHHHHH-HHHCCSSCEEE--CTTC-HHHHHTTCEEEEEE--TTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHH
T ss_pred CHHHHHHHH-HHhCCCceEEE--CCcH-HHHHHhCCcccccc--ccccccCcceEEEEECCCCeEEEEEcCCCcccCHHH
Confidence 789999999 78899999984 4433 34444533221100 00 0111289999999999999998664433 45
Q ss_pred HHHHHHhhh
Q 027311 216 IEVVLECLC 224 (225)
Q Consensus 216 l~~~l~~ll 224 (225)
+.+.|++|.
T Consensus 153 il~~l~~l~ 161 (163)
T 3gkn_A 153 VLAALKAHA 161 (163)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 556665554
No 30
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.96 E-value=5.6e-29 Score=186.93 Aligned_cols=145 Identities=15% Similarity=0.247 Sum_probs=125.4
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
...+|+++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|+ +.
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~-------~~ 79 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE-------QL 79 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC-------CH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------CH
Confidence 35789999999999999999999999999999999999999999999999999999998899999999985 78
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLE 221 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~ 221 (225)
+.+++|+ ++++++|+++. +.. ...+.|.... ..++.++|++||||++|+|++++.|..+.+++++.|+
T Consensus 80 ~~~~~~~-~~~~~~~~~~~--~~~--~~~~~~~~~~-------~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 147 (165)
T 3or5_A 80 PNVKNYM-KTQGIIYPVMM--ATP--ELIRAFNGYI-------DGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVK 147 (165)
T ss_dssp HHHHHHH-HHHTCCSCEEE--CCH--HHHHHHHTTS-------TTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCCceEe--cCH--HHHHHHhhhh-------ccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHH
Confidence 8899998 78899999884 321 3333332211 1167889999999999999999999999999999999
Q ss_pred hhhC
Q 027311 222 CLCC 225 (225)
Q Consensus 222 ~ll~ 225 (225)
++|+
T Consensus 148 ~~l~ 151 (165)
T 3or5_A 148 MALG 151 (165)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9874
No 31
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.96 E-value=4.1e-29 Score=184.15 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=118.9
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
...+|+++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.+++++++++++++.+++|++|. +.
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~ 76 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER-------KD 76 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS-------SS
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC-------CH
Confidence 35799999999999999999999999999999999999999999999999999999998899999999985 66
Q ss_pred HHHHHHHHhhcCCC-cceeeeecCCCC-CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHH
Q 027311 142 EQIQEFACTRFKAE-FPIFDKVDVNGD-NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVV 219 (225)
Q Consensus 142 ~~~~~~~~~~~~~~-~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (225)
+++++|+ ++++.+ |+++ .|..+. .....| ++.++|+++|||++|+|++++.|..+.+++.+.
T Consensus 77 ~~~~~~~-~~~~~~~~~~~--~d~~~~~~~~~~~-------------~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~ 140 (148)
T 3hcz_A 77 EEWLKFI-RSKKIGGWLNV--RDSKNHTDFKITY-------------DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQ 140 (148)
T ss_dssp HHHHHHH-HHHTCTTSEEE--ECTTCCCCHHHHH-------------CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHH
T ss_pred HHHHHHH-HHcCCCCceEE--eccccchhHHHhc-------------CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHH
Confidence 7899998 777888 8888 454443 134444 888999999999999999999886555555555
Q ss_pred HHhhh
Q 027311 220 LECLC 224 (225)
Q Consensus 220 l~~ll 224 (225)
+.+++
T Consensus 141 l~~~l 145 (148)
T 3hcz_A 141 YEKSL 145 (148)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55543
No 32
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.96 E-value=2.7e-29 Score=186.51 Aligned_cols=134 Identities=12% Similarity=0.182 Sum_probs=112.6
Q ss_pred eecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHH
Q 027311 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEF 147 (225)
Q Consensus 68 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~ 147 (225)
++|+|.+. .+|+.+++++++||++||+||++||++|+.++|.|++++++++++++.+++|++| +.+++++|
T Consensus 4 pa~~~~~~-~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ---CEEET-TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred Ccchhhcc-cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 34445444 7999999999999999999999999999999999999999998888999999997 77899999
Q ss_pred HHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCc--cccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDS--IKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
+ ++++++||++.+. . .....+++.+ + +.++|++||||++|+|++++.|..+.+++++.|+++.
T Consensus 75 ~-~~~~~~~~~~~~~--~-~~~~~~~~~~----------~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~ 139 (151)
T 3raz_A 75 L-KQTPVSYPIWRYT--G-ANSRNFMKTY----------GNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAH 139 (151)
T ss_dssp H-HHSCCSSCEEEEC--C-SCHHHHHHTT----------TCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHH
T ss_pred H-HHcCCCCceEecC--c-cchHHHHHHh----------CCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 8 8899999998532 2 2222233222 4 8889999999999999999999999999999999886
No 33
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.96 E-value=5e-29 Score=185.66 Aligned_cols=134 Identities=25% Similarity=0.370 Sum_probs=111.1
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
...|+.+|+|++++.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++++++|++|. ..+
T Consensus 9 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~-------~~~ 81 (152)
T 2lrt_A 9 KIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG-------DEH 81 (152)
T ss_dssp SSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC-------CHH
T ss_pred hccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC-------CHH
Confidence 3678999999999999999999999999999999999999999999999999999999899999999985 566
Q ss_pred HHHHHHHhhcCCCcceeeeecCCCC--CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHH
Q 027311 143 QIQEFACTRFKAEFPIFDKVDVNGD--NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVL 220 (225)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l 220 (225)
.++++. . +.+|+++ .|..+. .....| ++.++|++||||++|+|++++.|..+ +++.+
T Consensus 82 ~~~~~~-~--~~~~~~~--~d~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~---~e~~~ 140 (152)
T 2lrt_A 82 FWKTSA-D--NLPWVCV--RDANGAYSSYISLY-------------NVTNLPSVFLVNRNNELSARGENIKD---LDEAI 140 (152)
T ss_dssp HHHHHH-T--TCSSEEE--ECSSGGGCHHHHHH-------------TCCSCSEEEEEETTTEEEEETTTCSC---HHHHH
T ss_pred HHHHHH-h--CCCceEE--ECCCCcchHHHHHc-------------CcccCceEEEECCCCeEEEecCCHHH---HHHHH
Confidence 777776 3 3678877 454443 233344 78889999999999999999998554 44444
Q ss_pred Hhhh
Q 027311 221 ECLC 224 (225)
Q Consensus 221 ~~ll 224 (225)
.+++
T Consensus 141 ~~~~ 144 (152)
T 2lrt_A 141 KKLL 144 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 34
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.96 E-value=4.6e-29 Score=187.32 Aligned_cols=153 Identities=16% Similarity=0.203 Sum_probs=116.3
Q ss_pred eecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCC-ChHhHHHHHHHHHHHhc----CCeEEEEEecCCCCCCCCCCHH
Q 027311 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 68 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~-C~~~~~~l~~l~~~~~~----~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
.+|+|+++|.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++++++|++| ++.++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHH
Confidence 479999999999999999999999999999999998 99999999999999986 47999999998 3556789
Q ss_pred HHHHHHHhhcCCCcceeeeecCCCCCchhhhhhcccc--CCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHH
Q 027311 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSS--KGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVL 220 (225)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l 220 (225)
.+++|+ ++++.+|+++...........+.|+..... .....++.+.+.|++||||++|+|++++.|..+++++.+.|
T Consensus 78 ~~~~~~-~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 156 (164)
T 2ggt_A 78 AIANYV-KEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASI 156 (164)
T ss_dssp HHHHHH-HTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHH
T ss_pred HHHHHH-HHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHH
Confidence 999999 788999988732110001122223110000 00000012233339999999999999999998999999999
Q ss_pred HhhhC
Q 027311 221 ECLCC 225 (225)
Q Consensus 221 ~~ll~ 225 (225)
+++|+
T Consensus 157 ~~ll~ 161 (164)
T 2ggt_A 157 ATHMR 161 (164)
T ss_dssp HHHHG
T ss_pred HHHHH
Confidence 99873
No 35
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=2e-28 Score=181.59 Aligned_cols=137 Identities=23% Similarity=0.362 Sum_probs=120.7
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
+.+|+++|+|++.+ +|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. +.+
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~ 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDA-------KTG 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCS-------SHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCC-------CHH
Confidence 47899999999999 9999999999999999999999999999999999999999999899999999985 678
Q ss_pred HHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCCh--hhHHHHH
Q 027311 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP--LSIEVVL 220 (225)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~--~~l~~~l 220 (225)
.+++|+ ++++.+|+++ .|..+. ..+.| ++.++|++||||++|+|++++.|..+. +++++.|
T Consensus 75 ~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i 137 (152)
T 3gl3_A 75 DAMKFL-AQVPAEFTVA--FDPKGQ-TPRLY-------------GVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp HHHHHH-HHSCCCSEEE--ECTTCH-HHHHT-------------TCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred HHHHHH-HHcCCCCcee--ECCcch-hHHHc-------------CCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHH
Confidence 888888 8889999988 444432 33334 888999999999999999999886544 6899999
Q ss_pred Hhhh
Q 027311 221 ECLC 224 (225)
Q Consensus 221 ~~ll 224 (225)
++++
T Consensus 138 ~~~~ 141 (152)
T 3gl3_A 138 LAAL 141 (152)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8876
No 36
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.96 E-value=8.4e-29 Score=190.41 Aligned_cols=146 Identities=19% Similarity=0.299 Sum_probs=122.9
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
.+.+|+.+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++ +++++|++|.....+.++.
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~ 84 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAP 84 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSH
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCH
Confidence 457899999999999999999999999999999999999999999999999999999988 9999999975333334588
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcC--------CCCCh
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYA--------PTTSP 213 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~--------g~~~~ 213 (225)
+.+++|+ ++++++|+++. |.++. ..+.| ++.++|++||||++|+|+++.. |..+.
T Consensus 85 ~~~~~~~-~~~~~~~~~~~--d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~ 147 (188)
T 2cvb_A 85 EKMAAFA-EEHGIFFPYLL--DETQE-VAKAY-------------RALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQS 147 (188)
T ss_dssp HHHHHHH-HHHTCCSCEEE--CSSSH-HHHHT-------------TCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCC
T ss_pred HHHHHHH-HHhCCCceEEE--CCcch-HHHHc-------------CCCCCCeEEEECCCCcEEEEEecCCccccccccCH
Confidence 9999998 78899999883 43332 33344 7888999999999999999822 23367
Q ss_pred hhHHHHHHhhhC
Q 027311 214 LSIEVVLECLCC 225 (225)
Q Consensus 214 ~~l~~~l~~ll~ 225 (225)
+++++.|+++++
T Consensus 148 ~~l~~~i~~ll~ 159 (188)
T 2cvb_A 148 HDLEAAIEALLR 159 (188)
T ss_dssp CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 889999998873
No 37
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.96 E-value=3.1e-28 Score=180.59 Aligned_cols=139 Identities=19% Similarity=0.297 Sum_probs=120.5
Q ss_pred cCCCceec-CeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 63 SQSKTSVH-DFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 63 ~~~g~~~p-~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
+.+|+++| +|++++.+|+.+++++++||++||.||++||++|+.+++.+++++++++++++.+++|++|. +.
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~ 75 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDK-------NK 75 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCS-------CH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccC-------cH
Confidence 47899999 99999999999999999999999999999999999999999999999998889999999985 66
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLE 221 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~ 221 (225)
+.+++|+ ++++.+++.+. .|. .....+.| ++.++|+++|||++|+|++++.|..+.+++++.|+
T Consensus 76 ~~~~~~~-~~~~~~~~~~~-~d~-~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 139 (152)
T 2lja_A 76 KAWENMV-TKDQLKGIQLH-MGT-DRTFMDAY-------------LINGIPRFILLDRDGKIISANMTRPSDPKTAEKFN 139 (152)
T ss_dssp HHHHHHH-HHHTCCSEEEE-CSS-CTHHHHHT-------------TCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHH
T ss_pred HHHHHHH-HhcCCCCceee-cCc-chhHHHHc-------------CcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHH
Confidence 7888888 67788765442 232 22333333 88899999999999999999999888999999999
Q ss_pred hhh
Q 027311 222 CLC 224 (225)
Q Consensus 222 ~ll 224 (225)
+++
T Consensus 140 ~~~ 142 (152)
T 2lja_A 140 ELL 142 (152)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 38
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.96 E-value=5.7e-29 Score=190.38 Aligned_cols=152 Identities=14% Similarity=0.217 Sum_probs=117.4
Q ss_pred cccccCCCce----ecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCC
Q 027311 59 HTMASQSKTS----VHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQF 133 (225)
Q Consensus 59 ~~~~~~~g~~----~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~ 133 (225)
....+++|+. +|+|+++|.+|+.++|++++||++||+|| ++||++|+.+++.|++++++|+++|++|++|+.|
T Consensus 17 ~~~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D-- 94 (179)
T 3ixr_A 17 RGSHMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD-- 94 (179)
T ss_dssp -CCSSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC--
T ss_pred CCcccCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC--
Confidence 3445567777 99999999999999999999999999999 9999999999999999999999999999999988
Q ss_pred CCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCC-CccccceeEEEECCCCcEEEEcCCCCC
Q 027311 134 GAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFG-DSIKWNFSKFLVDKEGNVVERYAPTTS 212 (225)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~v~~~P~~~lid~~G~I~~~~~g~~~ 212 (225)
+.+.+++|+ ++++++||++. |.++ ...+.|+...... ..| +.....|++||||++|+|++++.+...
T Consensus 95 ------~~~~~~~~~-~~~~~~f~~l~--D~~~-~~~~~~gv~~~~~--~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~ 162 (179)
T 3ixr_A 95 ------SVKSHDSFC-AKQGFTFPLVS--DSDA-ILCKAFDVIKEKT--MYGRQVIGIERSTFLIGPTHRIVEAWRQVKV 162 (179)
T ss_dssp ------CHHHHHHHH-HHHTCCSCEEE--CTTC-HHHHHTTCEEEEC--CC--CEEEECCEEEEECTTSBEEEEECSCCS
T ss_pred ------CHHHHHHHH-HHcCCceEEEE--CCch-HHHHHcCCccccc--ccCcccCCcceEEEEECCCCEEEEEEcCCCC
Confidence 788899998 78899999984 4433 3444554332211 001 012247999999999999999865443
Q ss_pred h---hhHHHHHHhhh
Q 027311 213 P---LSIEVVLECLC 224 (225)
Q Consensus 213 ~---~~l~~~l~~ll 224 (225)
. +++.+.|++|.
T Consensus 163 ~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 163 PGHAEEVLNKLKAHA 177 (179)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 3 45556666554
No 39
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.96 E-value=6.9e-29 Score=191.93 Aligned_cols=146 Identities=19% Similarity=0.264 Sum_probs=125.1
Q ss_pred ccCCCceecCeEEe-CCCCCeecCCccCCC-EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 62 ASQSKTSVHDFSVK-DAKGQDVDLSIYKGK-LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 62 ~~~~g~~~p~f~l~-~~~G~~~~l~~~~gk-~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
...+|+.+|+|+++ +.+|+.+++++++|| ++||+||++||++|+.+++.|++++++|+++++++++|++|.......+
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d 96 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPED 96 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccc
Confidence 45799999999999 999999999999999 5999999999999999999999999999988999999999853333336
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEE---------cCCC
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVER---------YAPT 210 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~---------~~g~ 210 (225)
+.+.+++|+ ++++++|+++. |..+ ...+.| ++.++|++||||++|+|+++ +.|.
T Consensus 97 ~~~~~~~~~-~~~~~~~~~~~--d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~ 159 (196)
T 2ywi_A 97 SPENMKKVA-EELGYPFPYLY--DETQ-EVAKAY-------------DAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIP 159 (196)
T ss_dssp SHHHHHHHH-HHHTCCSCEEE--CSSC-HHHHHH-------------TCCEESEEEEEETTCBEEEEECSSSCCTTTCCC
T ss_pred CHHHHHHHH-HHcCCCceEEE--CCch-HHHHHh-------------CCCCCCeEEEEcCCCeEEEccccCcccccccCc
Confidence 889999999 78899999883 4333 233344 78889999999999999998 4576
Q ss_pred CChhhHHHHHHhhh
Q 027311 211 TSPLSIEVVLECLC 224 (225)
Q Consensus 211 ~~~~~l~~~l~~ll 224 (225)
.+.+++++.|++++
T Consensus 160 ~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 160 VTGESIRAALDALL 173 (196)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 78889999999886
No 40
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=186.21 Aligned_cols=150 Identities=14% Similarity=0.209 Sum_probs=117.4
Q ss_pred cCeEEeCCCCCeecCCccCCCEEEEEEcccCCCC-ChHhHHHHHHHHHHHhc----CCeEEEEEecCCCCCCCCCCHHHH
Q 027311 70 HDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNEQI 144 (225)
Q Consensus 70 p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~-C~~~~~~l~~l~~~~~~----~~~~iv~Is~d~~~~~~~~~~~~~ 144 (225)
|+|+++|.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++++++|++| ++.++.+.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d----~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD----PERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC----STTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC----CCCCCHHHH
Confidence 8999999999999999999999999999999997 99999999999999975 47999999998 345688999
Q ss_pred HHHHHhhcCCCcceeeeecCCCCCchhhhhhcccc--CCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 145 QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSS--KGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
++|+ ++++.+|+.+.+.........+.|+..... .....++.+.+.|++||||++|+|++++.|..+.+++.+.|++
T Consensus 83 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 83 ARYV-QDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHH-HTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHH-HHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 9998 788999998742111111122233211110 0011122455677999999999999999999999999999998
Q ss_pred hh
Q 027311 223 LC 224 (225)
Q Consensus 223 ll 224 (225)
++
T Consensus 162 ll 163 (171)
T 2rli_A 162 HM 163 (171)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 41
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.96 E-value=1.4e-28 Score=187.57 Aligned_cols=137 Identities=15% Similarity=0.199 Sum_probs=118.8
Q ss_pred cccCCCceecCeEEeCCCC--CeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKG--QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G--~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
....+|+++|+|++.+.+| +.+++++++||++||+||++||++|+.++|.|++++++ ++.+++|++|+
T Consensus 28 ~~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d------ 97 (176)
T 3kh7_A 28 PSALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKD------ 97 (176)
T ss_dssp TTTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESC------
T ss_pred cccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCC------
Confidence 4468999999999999999 88999999999999999999999999999999999876 69999999875
Q ss_pred CCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHH
Q 027311 139 GDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEV 218 (225)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~ 218 (225)
+.+.+++|+ ++++.+|+.+. .|..+ ...+.| ++.++|++||||++|+|++++.|..+.+++.+
T Consensus 98 -~~~~~~~~~-~~~~~~~~~~~-~d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 160 (176)
T 3kh7_A 98 -DNAAAIKWL-NELHNPYLLSI-SDADG-TLGLDL-------------GVYGAPETYLIDKQGIIRHKIVGVVDQKVWRE 160 (176)
T ss_dssp -CHHHHHHHH-HHTTCCCSEEE-EETTC-HHHHHH-------------TCCSSCEEEEECTTCBEEEEEESCCCHHHHHH
T ss_pred -CHHHHHHHH-HHcCCCCceEE-ECCcc-hHHHHc-------------CCCCCCeEEEECCCCeEEEEEcCCCCHHHHHH
Confidence 889999999 78899998532 34333 334444 88889999999999999999999999988888
Q ss_pred HHHhhh
Q 027311 219 VLECLC 224 (225)
Q Consensus 219 ~l~~ll 224 (225)
.|+++|
T Consensus 161 ~l~~~l 166 (176)
T 3kh7_A 161 QLAPLY 166 (176)
T ss_dssp HTHHHH
T ss_pred HHHHHH
Confidence 888776
No 42
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.96 E-value=2.8e-28 Score=184.99 Aligned_cols=146 Identities=13% Similarity=0.122 Sum_probs=116.7
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
....+|+++|+|+++|.+|+.+++++++||++||+|| ++|||+|+.+++.|+++++++ +++++++||.|
T Consensus 19 ~~l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d-------- 88 (171)
T 2yzh_A 19 PELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD-------- 88 (171)
T ss_dssp CCCCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------
T ss_pred CcCCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------
Confidence 3457999999999999999999999999999999999 899999999999999999999 67999999998
Q ss_pred CHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC-----CCCh
Q 027311 140 DNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP-----TTSP 213 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g-----~~~~ 213 (225)
+.+.+++|+ +++++ +|+++. |...... +.|+...... ... + .++|++||||++|+|++++.| ..+.
T Consensus 89 ~~~~~~~~~-~~~~~~~~~~l~--D~~~~~~-~~~gv~~~~~-~~~--g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~ 160 (171)
T 2yzh_A 89 LPFAQKRFC-ESFNIQNVTVAS--DFRYRDM-EKYGVLIGEG-ALK--G-ILARAVFIIDKEGKVAYVQLVPEITEEPNY 160 (171)
T ss_dssp CHHHHHHHH-HHTTCCSSEEEE--CTTTCGG-GGGTCBBCSS-TTT--T-SBCCEEEEECTTSBEEEEEECSBTTSCCCC
T ss_pred CHHHHHHHH-HHcCCCCeEEee--cCccCcH-HHhCCEeccc-ccC--C-ceeeEEEEEcCCCeEEEEEeCCCcCCCCCH
Confidence 678889998 78899 899984 4122334 5564332110 001 1 147999999999999999864 3456
Q ss_pred hhHHHHHHhhh
Q 027311 214 LSIEVVLECLC 224 (225)
Q Consensus 214 ~~l~~~l~~ll 224 (225)
+++.+.|++||
T Consensus 161 ~~ll~~l~~ll 171 (171)
T 2yzh_A 161 DEVVNKVKELI 171 (171)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhhC
Confidence 78999998875
No 43
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.96 E-value=2.1e-28 Score=185.69 Aligned_cols=155 Identities=14% Similarity=0.145 Sum_probs=119.9
Q ss_pred CCCceec-CeEEeCCCCCeecCCccCCCEEEEEEcccCCC-CChHhHHHHHHHHHHHhc--CCeEEEEEecCCCCCCCCC
Q 027311 64 QSKTSVH-DFSVKDAKGQDVDLSIYKGKLLLIVNVASQCG-LTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 64 ~~g~~~p-~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~-~C~~~~~~l~~l~~~~~~--~~~~iv~Is~d~~~~~~~~ 139 (225)
.+|+++| +|+++|.+|+.+++++++||++||+||++||+ +|..+++.|+++++++++ .++++++||+| + .|
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d----~-~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD----P-KD 76 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC----T-TC
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC----C-CC
Confidence 5899999 99999999999999999999999999999998 699999999999999975 45999999998 2 46
Q ss_pred CHHHHHHHHHhhcCCCcceeee-ecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC-CChhhHH
Q 027311 140 DNEQIQEFACTRFKAEFPIFDK-VDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-TSPLSIE 217 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~-~~~~~l~ 217 (225)
+.+.+++|+ ++++.+++.+.. ...+.+....+.+.++..... .++++.+.|++||||++|+|++++.|. .+++++.
T Consensus 77 ~~~~~~~~~-~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~ 154 (170)
T 3me7_A 77 TLEDIKRFQ-KEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT-AGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFV 154 (170)
T ss_dssp CHHHHHHHH-HHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE-ETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHH
T ss_pred CHHHHHHHH-HHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec-CCCccccCceEEEECCCCeEEEEEeCCCCCHHHHH
Confidence 899999999 888988764311 111111222232221110000 123678889999999999999988775 5688999
Q ss_pred HHHHhhhC
Q 027311 218 VVLECLCC 225 (225)
Q Consensus 218 ~~l~~ll~ 225 (225)
+.|+++++
T Consensus 155 ~~l~~~~~ 162 (170)
T 3me7_A 155 NALRLARG 162 (170)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhhc
Confidence 99998763
No 44
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.96 E-value=2e-28 Score=181.81 Aligned_cols=138 Identities=17% Similarity=0.288 Sum_probs=122.1
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHH
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~ 143 (225)
.+|+.+|+|++++.+|+.+++++++||++||.||++||++|+.+++.+++++++++++++.+++|+.|. ++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~------~~~~~ 76 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPI------DPIES 76 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTT------SCHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCC------CCHHH
Confidence 579999999999999999999999999999999999999999999999999999998899999999762 37889
Q ss_pred HHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
+++|+ ++++.+|++. .|.. ....+.| ++.++|+++|||++|+|++++.|..+.+++.+.|+++
T Consensus 77 ~~~~~-~~~~~~~~~~--~d~~-~~~~~~~-------------~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 77 VRQYV-KDYGLPFTVM--YDAD-KAVGQAF-------------GTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp HHHHH-HHTTCCSEEE--ECSS-CHHHHHH-------------TCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHH-HHcCCCceEE--cCch-HHHHHHc-------------CCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 99998 8889999987 3433 2233344 8888999999999999999999999999999999998
Q ss_pred h
Q 027311 224 C 224 (225)
Q Consensus 224 l 224 (225)
|
T Consensus 140 l 140 (153)
T 2l5o_A 140 W 140 (153)
T ss_dssp H
T ss_pred H
Confidence 7
No 45
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=3.7e-28 Score=180.56 Aligned_cols=138 Identities=17% Similarity=0.323 Sum_probs=120.1
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHH
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~ 143 (225)
.+|+++|+|++++.+|+.+++++++||++||.||++||++|+.+++.++++++++++.++.+++|++|. ++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~~ 76 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE------GGKVA 76 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT------THHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC------cchHH
Confidence 689999999999999999999999999999999999999999999999999999998889999999984 13788
Q ss_pred HHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC--ChhhHHHHHH
Q 027311 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SPLSIEVVLE 221 (225)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~--~~~~l~~~l~ 221 (225)
+++|+ ++++.+|+++ .|... ...+.| ++.++|++||||++|+|++++.|.. +.+++.+.|+
T Consensus 77 ~~~~~-~~~~~~~~~~--~d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~ 139 (154)
T 3kcm_A 77 VEEFF-RKTGFTLPVL--LDADK-RVGKLY-------------GTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLN 139 (154)
T ss_dssp HHHHH-HHHCCCCCEE--ECTTC-HHHHHH-------------TCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHH-HHcCCCeeEE--ecCch-HHHHHh-------------CCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHH
Confidence 88888 7889999998 34333 233444 8889999999999999999988876 5568999998
Q ss_pred hhh
Q 027311 222 CLC 224 (225)
Q Consensus 222 ~ll 224 (225)
++.
T Consensus 140 ~l~ 142 (154)
T 3kcm_A 140 NEL 142 (154)
T ss_dssp TC-
T ss_pred HHH
Confidence 875
No 46
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.96 E-value=3.6e-28 Score=186.49 Aligned_cols=146 Identities=19% Similarity=0.234 Sum_probs=120.4
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
....+|..+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++++++|++|. ++
T Consensus 32 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~------~~ 105 (186)
T 1jfu_A 32 TMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT------RD 105 (186)
T ss_dssp EECCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC------SC
T ss_pred ccccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC------CC
Confidence 445789999999999999999999999999999999999999999999999999999998889999999984 13
Q ss_pred HHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCC--hhhHH
Q 027311 141 NEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS--PLSIE 217 (225)
Q Consensus 141 ~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~--~~~l~ 217 (225)
.+.+++|+ +++++ .|+++ .|..+ ...+.|+.. ++..++|++||||++|+|++++.|..+ .+++.
T Consensus 106 ~~~~~~~~-~~~~~~~~~~~--~d~~~-~~~~~~~~~---------~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~ 172 (186)
T 1jfu_A 106 PEKPKTFL-KEANLTRLGYF--NDQKA-KVFQDLKAI---------GRALGMPTSVLVDPQGCEIATIAGPAEWASEDAL 172 (186)
T ss_dssp TTHHHHHH-HHTTCCTTCCE--ECTTC-HHHHHHHTT---------TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHH
T ss_pred HHHHHHHH-HHcCCCCCceE--ECCcc-hHHHHhccc---------cccCCCCEEEEECCCCCEEEEEecCCccCHHHHH
Confidence 46778888 78888 58887 34432 233333211 023478999999999999999988765 67899
Q ss_pred HHHHhhhC
Q 027311 218 VVLECLCC 225 (225)
Q Consensus 218 ~~l~~ll~ 225 (225)
+.|+++++
T Consensus 173 ~~l~~ll~ 180 (186)
T 1jfu_A 173 KLIRAATG 180 (186)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99999874
No 47
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.96 E-value=5.5e-28 Score=185.92 Aligned_cols=136 Identities=13% Similarity=0.201 Sum_probs=117.3
Q ss_pred CCCceecCeEEeCCCCC----eecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 64 QSKTSVHDFSVKDAKGQ----DVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~----~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
.+|+.+|+|++.+.+|+ .+++++++||++||+|| ++||++|+.+++.|++++++|+++++++++|++|
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------- 74 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD------- 74 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC-------
Confidence 58999999999999999 99999999999999999 9999999999999999999999888999999998
Q ss_pred CCHHHHHHHHHhhc----CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccc------cceeEEEECCCCcEEEEcC
Q 027311 139 GDNEQIQEFACTRF----KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVVERYA 208 (225)
Q Consensus 139 ~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~I~~~~~ 208 (225)
+.+.+++|+ +++ +.+|+++. |.. ....+.| ++. ++|++||||++|+|++++.
T Consensus 75 -~~~~~~~~~-~~~~~~~~~~~~~~~--d~~-~~~~~~~-------------~v~~~~~g~~~P~~~lid~~G~i~~~~~ 136 (187)
T 1we0_A 75 -THFVHKAWH-ENSPAVGSIEYIMIG--DPS-QTISRQF-------------DVLNEETGLADRGTFIIDPDGVIQAIEI 136 (187)
T ss_dssp -CHHHHHHHH-HSCHHHHTCCSEEEE--CTT-CHHHHHT-------------TCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred -CHHHHHHHH-HHhccccCCCceEEE--CCc-hHHHHHh-------------CCCcCCCCceeeEEEEECCCCeEEEEEe
Confidence 678888888 666 78999884 433 3333444 454 7899999999999999988
Q ss_pred CCC----ChhhHHHHHHhhh
Q 027311 209 PTT----SPLSIEVVLECLC 224 (225)
Q Consensus 209 g~~----~~~~l~~~l~~ll 224 (225)
|.. +.+++.+.|++++
T Consensus 137 g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 137 NADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp ECTTSCCCTTHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHh
Confidence 764 5678888888764
No 48
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.96 E-value=3.8e-28 Score=191.72 Aligned_cols=142 Identities=16% Similarity=0.234 Sum_probs=116.0
Q ss_pred cCCCceecCeEEeCC--CC--CeecCCcc-CCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCC
Q 027311 63 SQSKTSVHDFSVKDA--KG--QDVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G--~~~~l~~~-~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~ 136 (225)
+.+|+++|+|++++. +| +.++++++ +||++||+|| ++|||+|+.++|.|++++++|++++++||+||+|
T Consensus 25 l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D----- 99 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD----- 99 (221)
T ss_dssp -CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC-----
Confidence 579999999999999 99 99999999 9999999999 9999999999999999999999889999999997
Q ss_pred CCCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC
Q 027311 137 EPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g 209 (225)
+.+.+++|+ +++ +++||++. |.. ....+.|+.. ... + ..+|++||||++|+|++++.|
T Consensus 100 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l~--D~~-~~~~~~ygv~-~~~------g-~~~P~~~lID~~G~I~~~~~g 164 (221)
T 2c0d_A 100 ---SVYSHLAWK-NMPIEKGGIGNVEFTLVS--DIN-KDISKNYNVL-YDN------S-FALRGLFIIDKNGCVRHQTVN 164 (221)
T ss_dssp ---CHHHHHHHH-HSCGGGTCCCSCSSEEEE--CTT-SHHHHHTTCE-ETT------T-EECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHH-HHhhhhcCccCCceEEEE--CCc-hHHHHHcCCc-ccC------C-CccceEEEECCCCeEEEEEec
Confidence 778888898 666 67899884 433 3344455322 110 1 358999999999999999866
Q ss_pred C----CChhhHHHHHHhhh
Q 027311 210 T----TSPLSIEVVLECLC 224 (225)
Q Consensus 210 ~----~~~~~l~~~l~~ll 224 (225)
. .+.+++.+.|++|.
T Consensus 165 ~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 165 DLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp CTTCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHh
Confidence 4 24567888887764
No 49
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.95 E-value=2.7e-28 Score=187.77 Aligned_cols=142 Identities=10% Similarity=0.207 Sum_probs=115.3
Q ss_pred CCCceecCeEEeCC-CC--CeecCCccCCCEEEEEEcc-cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 64 QSKTSVHDFSVKDA-KG--QDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 64 ~~g~~~p~f~l~~~-~G--~~~~l~~~~gk~vlv~F~~-twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
.+|+++|+|++.+. +| +.+++++++||++||+||+ +|||+|+.+++.|++++++|++++++|++||+|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d-------- 73 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD-------- 73 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 57999999999999 59 8999999999999999995 999999999999999999999889999999998
Q ss_pred CHHHHHHHHHhhc----CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC----
Q 027311 140 DNEQIQEFACTRF----KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT---- 211 (225)
Q Consensus 140 ~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~---- 211 (225)
+.+.+++|+ +++ +++||++. |..+ ...+.|+...... + .++|++||||++|+|++++.|..
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~fp~l~--D~~~-~~~~~ygv~~~~~------g-~~~p~~~lID~~G~i~~~~~~~~~~~~ 142 (186)
T 1n8j_A 74 THFTHKAWH-SSSETIAKIKYAMIG--DPTG-ALTRNFDNMREDE------G-LADRATFVVDPQGIIQAIEVTAEGIGR 142 (186)
T ss_dssp CHHHHHHHH-HHCTTGGGCCSEEEE--CTTS-HHHHHTTCEETTT------T-EECEEEEEECTTSBEEEEEEECTTBCC
T ss_pred CHHHHHHHH-HHcCcccCCceeEEE--CCch-HHHHHhCCccCCC------C-ceeeEEEEECCCCeEEEEEecCCCCCC
Confidence 678888998 677 78999884 4333 3444453221100 1 14799999999999999987654
Q ss_pred ChhhHHHHHHhhh
Q 027311 212 SPLSIEVVLECLC 224 (225)
Q Consensus 212 ~~~~l~~~l~~ll 224 (225)
+.+++.+.|++|.
T Consensus 143 ~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 143 DASDLLRKIKAAQ 155 (186)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4677888887764
No 50
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.95 E-value=4.7e-28 Score=182.40 Aligned_cols=143 Identities=11% Similarity=0.097 Sum_probs=113.1
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcc-cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~-twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
....+|+.+|+|++++.+|+.+++++++||++||+||+ +||++|+.+++.|+++++++ +++++++||.|
T Consensus 14 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d-------- 83 (163)
T 1psq_A 14 KQLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD-------- 83 (163)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------
T ss_pred CCCCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------
Confidence 34679999999999999999999999999999999995 99999999999999999999 67999999988
Q ss_pred CHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC-----Ch
Q 027311 140 DNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-----SP 213 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~-----~~ 213 (225)
+.+.+++|+ +++++ +||++. |.......+.|+..... . ++ ..|++||||++|+|++++.|.. +.
T Consensus 84 ~~~~~~~~~-~~~~~~~~~~l~--D~~~~~~~~~~gv~~~~----~--g~-~~p~~~liD~~G~i~~~~~g~~~~~~~~~ 153 (163)
T 1psq_A 84 LPFAQKRWC-GAEGLDNAIMLS--DYFDHSFGRDYALLINE----W--HL-LARAVFVLDTDNTIRYVEYVDNINSEPNF 153 (163)
T ss_dssp CHHHHHHHH-HHHTCTTSEEEE--CTTTCHHHHHHTCBCTT----T--CS-BCCEEEEECTTCBEEEEEECSBTTSCCCH
T ss_pred CHHHHHHHH-HhcCCCCcEEec--CCchhHHHHHhCCcccc----C--Cc-eEEEEEEEcCCCeEEEEEecCCcCCCCCH
Confidence 678889998 77899 999884 41223344555322110 0 11 2599999999999999987632 22
Q ss_pred hhHHHHHHhh
Q 027311 214 LSIEVVLECL 223 (225)
Q Consensus 214 ~~l~~~l~~l 223 (225)
+++.+.|++|
T Consensus 154 ~~~l~~l~~l 163 (163)
T 1psq_A 154 EAAIAAAKAL 163 (163)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 5677777653
No 51
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.95 E-value=4.2e-28 Score=181.64 Aligned_cols=137 Identities=20% Similarity=0.265 Sum_probs=114.7
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCC-EEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGK-LLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk-~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
..+|+.+|+|++.+.+|+.+++++++|| ++||+|| ++||++|+.+++.|++++++++++++++++|++| +
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d--------~ 80 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG--------P 80 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC--------C
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC--------C
Confidence 5799999999999999999999999998 9999998 9999999999999999999999888999999997 7
Q ss_pred HHHHHHHHHhhcCCCcceeeeecC-CCCCchhhhhhccccCCCCCCCccc----cce--eEEEECCCCcEEEEcCCCCCh
Q 027311 141 NEQIQEFACTRFKAEFPIFDKVDV-NGDNAAPLYKHLKSSKGGLFGDSIK----WNF--SKFLVDKEGNVVERYAPTTSP 213 (225)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~v~----~~P--~~~lid~~G~I~~~~~g~~~~ 213 (225)
.+.+++|+ ++++.+|+++. |. ......+.| ++. ++| ++||||++|+|++++.|..+.
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~--d~~~~~~~~~~~-------------~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 81 PPTHKIWA-TQSGFTFPLLS--DFWPHGAVSQAY-------------GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp HHHHHHHH-HHHTCCSCEEE--CTTTTTHHHHHT-------------TCEETTTTEECSEEEEECTTSBEEEEEECCTTC
T ss_pred HHHHHHHH-HhcCCCceEEe--cCCcChHHHHHc-------------CCccccCCCeeeeEEEECCCCeEEEEEecCCCC
Confidence 78999998 78899999884 43 123333444 454 678 999999999999999887643
Q ss_pred ----hhHHHHHHhh
Q 027311 214 ----LSIEVVLECL 223 (225)
Q Consensus 214 ----~~l~~~l~~l 223 (225)
+++.+.|+++
T Consensus 145 ~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 145 VRDQRLWTDALAAL 158 (160)
T ss_dssp CCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHh
Confidence 3455555544
No 52
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.95 E-value=4.3e-28 Score=177.91 Aligned_cols=139 Identities=17% Similarity=0.303 Sum_probs=117.4
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
....+|+.+|+|++++.+|+.+++++ +||++||.||++||++|+.+++.++++++++++.++.+++|++|. ..++
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~----~~~~ 81 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN----SEQN 81 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG----GSSC
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC----CcCC
Confidence 34578999999999999999999999 999999999999999999999999999999997789999999873 3347
Q ss_pred HHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHH
Q 027311 141 NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVL 220 (225)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l 220 (225)
.+.+++|. ++++++|+++ .|.... ..+.| ++.++|+++|+|++|+|++++.|..+.+++++.|
T Consensus 82 ~~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 82 QQVVEDFI-KANKLTFPIV--LDSKGE-LMKEY-------------HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHHH-HHTTCCSCEE--ECSSSH-HHHHT-------------TCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHH-HHcCCceeEE--EcCchh-HHHhc-------------CcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 89999998 7889999988 343332 33333 8889999999999999999999999888888776
Q ss_pred H
Q 027311 221 E 221 (225)
Q Consensus 221 ~ 221 (225)
+
T Consensus 145 ~ 145 (145)
T 3erw_A 145 E 145 (145)
T ss_dssp C
T ss_pred C
Confidence 3
No 53
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.95 E-value=4.2e-28 Score=183.18 Aligned_cols=142 Identities=15% Similarity=0.118 Sum_probs=112.1
Q ss_pred ccccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 60 TMASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 60 ~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
+..+.+|+++|+|+++|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++ +++++++||.|
T Consensus 17 ~~~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d------- 86 (166)
T 3p7x_A 17 GQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD------- 86 (166)
T ss_dssp SCCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS-------
T ss_pred cccCCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC-------
Confidence 34568999999999999999999999999999999999 78999999999999999988 67999999987
Q ss_pred CCHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC-----CC
Q 027311 139 GDNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-----TS 212 (225)
Q Consensus 139 ~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~-----~~ 212 (225)
+.+.+++|+ +++++ +||++. |.......+.|+...... +. .+|++||||++|+|++++.+. .+
T Consensus 87 -~~~~~~~~~-~~~~~~~~~~l~--D~~~~~~~~~~gv~~~~~------g~-~~p~~~liD~~G~i~~~~~~~~~~~~~~ 155 (166)
T 3p7x_A 87 -LPFAQKRWC-ASAGLDNVITLS--DHRDLSFGENYGVVMEEL------RL-LARAVFVLDADNKVVYKEIVSEGTDFPD 155 (166)
T ss_dssp -CHHHHHHHH-HHHTCSSCEEEE--CTTTCHHHHHHTCEETTT------TE-ECCEEEEECTTCBEEEEEECSBTTSCCC
T ss_pred -CHHHHHHHH-HHcCCCceEEcc--CCchhHHHHHhCCccccC------Cc-eeeEEEEECCCCeEEEEEEcCCcccCCC
Confidence 788999998 78899 899984 542334555663322110 11 379999999999999985532 23
Q ss_pred hhhHHHHHHh
Q 027311 213 PLSIEVVLEC 222 (225)
Q Consensus 213 ~~~l~~~l~~ 222 (225)
.+++.+.|++
T Consensus 156 ~~~il~~l~~ 165 (166)
T 3p7x_A 156 FDAALAAYKN 165 (166)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 3556666554
No 54
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.95 E-value=5.1e-28 Score=182.59 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=112.9
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
...+|+.+|+|++++.+|+.+++++++||++||+|| ++||++|..+++.|++++++| ++++|++||.| +
T Consensus 16 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d--------~ 85 (165)
T 1q98_A 16 FPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD--------L 85 (165)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------C
Confidence 457999999999999999999999999999999999 899999999999999999999 67999999987 7
Q ss_pred HHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC--CChhhHH
Q 027311 141 NEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT--TSPLSIE 217 (225)
Q Consensus 141 ~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~--~~~~~l~ 217 (225)
.+.+++|+ +++++ +||++. |.......+.|+..... .... + .+.|++||||++|+|++++.|. ....+++
T Consensus 86 ~~~~~~~~-~~~~~~~~~~l~--D~~~~~~~~~~gv~~~~-~~~~--g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~ 158 (165)
T 1q98_A 86 PFAQARFC-GAEGIENAKTVS--TFRNHALHSQLGVDIQT-GPLA--G-LTSRAVIVLDEQNNVLHSQLVEEIKEEPNYE 158 (165)
T ss_dssp HHHHTTCT-TTTTCTTEEEEE--CTTCTHHHHHTTCEECS-STTT--T-SBCCEEEEECTTSBEEEEEECSBTTSCCCHH
T ss_pred HHHHHHHH-HHcCCCceEEee--ccccchHHHHhCceecc-cccC--C-ccceeEEEEcCCCEEEEEEeCCCCCCCCCHH
Confidence 78888888 78899 799884 43223344455432211 0011 1 1469999999999999998752 2334566
Q ss_pred HHHHhh
Q 027311 218 VVLECL 223 (225)
Q Consensus 218 ~~l~~l 223 (225)
+.++.|
T Consensus 159 ~~l~~l 164 (165)
T 1q98_A 159 AALAVL 164 (165)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 655543
No 55
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.95 E-value=3.6e-29 Score=189.33 Aligned_cols=154 Identities=19% Similarity=0.282 Sum_probs=120.9
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCC-ChHhHHHHHHHHHHHhcC---CeEEEEEecCCCCCCCCC
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKNQ---GLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~-C~~~~~~l~~l~~~~~~~---~~~iv~Is~d~~~~~~~~ 139 (225)
.+|+.+|+|++++.+| .+++++++||++||+||++||++ |+.+++.|++++++++++ ++++++|++|. +++
T Consensus 11 ~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~----~~d 85 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP----ERD 85 (172)
T ss_dssp EEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT----TTC
T ss_pred ccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC----CCC
Confidence 4688999999999999 99999999999999999999997 999999999999999864 69999999983 456
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCC--CCCCCccccceeEEEECCCCcEEEEcCCCC--Chhh
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG--GLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SPLS 215 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~v~~~P~~~lid~~G~I~~~~~g~~--~~~~ 215 (225)
+.+.+++|+ ++++.+|+++.+.+.......+.|+....... ....+++.++|++|||| +|+|++++.|.. +.++
T Consensus 86 ~~~~~~~~~-~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~ 163 (172)
T 2k6v_A 86 PPEVADRYA-KAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDR 163 (172)
T ss_dssp CHHHHHHHH-HHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHH
T ss_pred CHHHHHHHH-HHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHH
Confidence 889999999 78899999884211100122222322111000 01113578899999999 999999999887 8889
Q ss_pred HHHHHHhhh
Q 027311 216 IEVVLECLC 224 (225)
Q Consensus 216 l~~~l~~ll 224 (225)
+.+.|+++|
T Consensus 164 l~~~l~~ll 172 (172)
T 2k6v_A 164 VVADLQALL 172 (172)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHhC
Confidence 999999875
No 56
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.95 E-value=1.7e-27 Score=184.51 Aligned_cols=137 Identities=12% Similarity=0.170 Sum_probs=117.8
Q ss_pred cCCCceecCeEEeCCC-------------C--CeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEE
Q 027311 63 SQSKTSVHDFSVKDAK-------------G--QDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEIL 126 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~-------------G--~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv 126 (225)
+.+|+.+|+|++.+.+ | +.+++++++||++||+|| ++||++|+.+++.|++++++|++++++++
T Consensus 4 l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 83 (195)
T 2bmx_A 4 LTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQIL 83 (195)
T ss_dssp CCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEE
T ss_pred CCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEE
Confidence 4789999999999998 7 899999999999999999 99999999999999999999998889999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhhc----CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccc-----cceeEEEE
Q 027311 127 AFPCNQFGAQEPGDNEQIQEFACTRF----KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLV 197 (225)
Q Consensus 127 ~Is~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~li 197 (225)
+|++| +.+.+++|+ +++ +.+|+++. |.. ....+.| ++. ++|++|||
T Consensus 84 ~Vs~d--------~~~~~~~~~-~~~~~~~~~~~~~~~--d~~-~~~~~~~-------------~v~~~~g~~~P~~~li 138 (195)
T 2bmx_A 84 GVSID--------SEFAHFQWR-AQHNDLKTLPFPMLS--DIK-RELSQAA-------------GVLNADGVADRVTFIV 138 (195)
T ss_dssp EEESS--------CHHHHHHHH-HHCTTGGGCCSCEEE--CTT-SHHHHHH-------------TCBCTTSSBCEEEEEE
T ss_pred EEECC--------CHHHHHHHH-HHhccccCCceeEEe--CCc-hHHHHHh-------------CCcccCCCccceEEEE
Confidence 99998 678888898 666 78899884 433 3344445 555 78999999
Q ss_pred CCCCcEEEEcCCCC----ChhhHHHHHHhhh
Q 027311 198 DKEGNVVERYAPTT----SPLSIEVVLECLC 224 (225)
Q Consensus 198 d~~G~I~~~~~g~~----~~~~l~~~l~~ll 224 (225)
|++|+|++++.|.. +.+++.+.|++++
T Consensus 139 d~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 139 DPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp CTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99999999987765 5678888888775
No 57
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.95 E-value=7e-28 Score=177.39 Aligned_cols=142 Identities=18% Similarity=0.243 Sum_probs=122.9
Q ss_pred CCCceecCeEE--eCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 64 QSKTSVHDFSV--KDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 64 ~~g~~~p~f~l--~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
++|+++|+|++ ++.+|+.+++++++||++||.||++||++|+.+++.+++++++++++ +.+++|++|... ...+.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~--~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSE--DDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCST--TTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCc--cccCH
Confidence 58999999999 78999999999999999999999999999999999999999999987 999999988522 23378
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLE 221 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~ 221 (225)
+++++|+ ++++++||++ .|.... ..+.| ++.++|+++|+|++|++++++.|..+.+++++.|+
T Consensus 79 ~~~~~~~-~~~~~~~~~~--~d~~~~-~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 141 (148)
T 2b5x_A 79 GKIKETA-AEHDITQPIF--VDSDHA-LTDAF-------------ENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVN 141 (148)
T ss_dssp HHHHHHH-HHTTCCSCEE--ECSSCH-HHHHT-------------CCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHH
T ss_pred HHHHHHH-HHcCCCcceE--ECCchh-HHHHh-------------CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHH
Confidence 8999998 7889999987 343322 33333 88899999999999999999999888999999999
Q ss_pred hhhC
Q 027311 222 CLCC 225 (225)
Q Consensus 222 ~ll~ 225 (225)
++++
T Consensus 142 ~~l~ 145 (148)
T 2b5x_A 142 RVLA 145 (148)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9874
No 58
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.95 E-value=7.7e-28 Score=186.76 Aligned_cols=136 Identities=11% Similarity=0.172 Sum_probs=116.5
Q ss_pred CCCceecCeEEeCC--CCC---eecCCcc-CCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCC
Q 027311 64 QSKTSVHDFSVKDA--KGQ---DVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (225)
Q Consensus 64 ~~g~~~p~f~l~~~--~G~---~~~l~~~-~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~ 136 (225)
.+|+.+|+|++++. +|+ .++++++ +||++||+|| ++||++|+.++|.|++++++|+++++++++|++|
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----- 76 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID----- 76 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC-----
Confidence 58999999999999 898 9999999 9999999999 9999999999999999999999889999999998
Q ss_pred CCCCHHHHHHHHHhh-------cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccc-----cceeEEEECCCCcEE
Q 027311 137 EPGDNEQIQEFACTR-------FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLVDKEGNVV 204 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~lid~~G~I~ 204 (225)
+.+.+++|+ ++ ++++||++. |..+ ...+.| ++. ++|++||||++|+|+
T Consensus 77 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~--d~~~-~~~~~~-------------~v~~~~g~~~P~~~lid~~G~i~ 136 (198)
T 1zof_A 77 ---SEQVHFAWK-NTPVEKGGIGQVSFPMVA--DITK-SISRDY-------------DVLFEEAIALRGAFLIDKNMKVR 136 (198)
T ss_dssp ---CHHHHHHHH-TSCGGGTCCCCCSSCEEE--CTTS-HHHHHT-------------TCEETTTEECEEEEEEETTTEEE
T ss_pred ---CHHHHHHHH-HhhhhcccccCceeEEEE--CCch-HHHHHh-------------CCcccCCcccceEEEECCCCEEE
Confidence 678888888 66 788999883 4332 333444 555 799999999999999
Q ss_pred EEcCCCC----ChhhHHHHHHhhh
Q 027311 205 ERYAPTT----SPLSIEVVLECLC 224 (225)
Q Consensus 205 ~~~~g~~----~~~~l~~~l~~ll 224 (225)
+++.|.. +.+++.+.|+++.
T Consensus 137 ~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 137 HAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHH
Confidence 9987754 4567888887764
No 59
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.95 E-value=4.4e-28 Score=182.45 Aligned_cols=142 Identities=19% Similarity=0.265 Sum_probs=120.9
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCC---------
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ--------- 132 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~--------- 132 (225)
...+|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++ ++.+++|++|.
T Consensus 10 ~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~ 87 (165)
T 3ha9_A 10 SEEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGL 87 (165)
T ss_dssp HHHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTC
T ss_pred cccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccccc
Confidence 3578999999999999999999999999999999999999999999999999999998 69999999881
Q ss_pred --CCCCCCCCHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC
Q 027311 133 --FGAQEPGDNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (225)
Q Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g 209 (225)
.+.+++++.+.+++|+ +++++ +|+++. | .....+.| ++.++|+++|||++|+|++ .|
T Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--d--~~~~~~~~-------------~v~~~P~~~lid~~G~i~~--~g 147 (165)
T 3ha9_A 88 NKPGYPPPDTPEMFRKFI-ANYGDPSWIMVM--D--DGSLVEKF-------------NVRSIDYIVIMDKSSNVLY--AG 147 (165)
T ss_dssp CSTTSCCCCCHHHHHHHH-HHHSCTTSEEEE--C--CSHHHHHT-------------TCCSSSEEEEEETTCCEEE--EE
T ss_pred ccccCCCCCCHHHHHHHH-HHcCCCCeeEEe--C--hHHHHHHh-------------CCCCceEEEEEcCCCcEEE--eC
Confidence 2233445899999999 78889 999984 4 23344444 8889999999999999998 66
Q ss_pred CC-ChhhHHHHHHhhhC
Q 027311 210 TT-SPLSIEVVLECLCC 225 (225)
Q Consensus 210 ~~-~~~~l~~~l~~ll~ 225 (225)
.. +.+++++.|+++++
T Consensus 148 ~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 148 TTPSLGELESVIKSVQG 164 (165)
T ss_dssp ESCCHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 67 78999999998863
No 60
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.95 E-value=1.2e-27 Score=187.84 Aligned_cols=138 Identities=13% Similarity=0.172 Sum_probs=117.3
Q ss_pred ccCCCceecCeEEeCC--CC--CeecCCcc-CCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCC
Q 027311 62 ASQSKTSVHDFSVKDA--KG--QDVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGA 135 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~--~G--~~~~l~~~-~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~ 135 (225)
.+.+|+++|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|++++++||+||+|
T Consensus 20 ~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D---- 95 (213)
T 2i81_A 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD---- 95 (213)
T ss_dssp CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS----
T ss_pred cccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 4579999999999999 89 89999999 9999999999 9999999999999999999999889999999998
Q ss_pred CCCCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccc-----cceeEEEECCCCcE
Q 027311 136 QEPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLVDKEGNV 203 (225)
Q Consensus 136 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~lid~~G~I 203 (225)
+.+.+++|+ +++ +++||++. |.. ....+.| ++. .+|++||||++|+|
T Consensus 96 ----~~~~~~~~~-~~~~~~~g~~~~~fp~l~--D~~-~~~~~~y-------------gv~~~~g~~~p~~~lID~~G~i 154 (213)
T 2i81_A 96 ----SKYTHLAWK-KTPLAKGGIGNIKHTLLS--DIT-KSISKDY-------------NVLFDDSVSLRAFVLIDMNGIV 154 (213)
T ss_dssp ----CHHHHHHHH-SSCGGGTCCCSCSSEEEE--CTT-SHHHHHT-------------TCEETTTEECEEEEEECTTSBE
T ss_pred ----CHHHHHHHH-HHHHhhCCccCCCceEEE--CCc-hHHHHHh-------------CCccccCCcccEEEEECCCCEE
Confidence 778888898 666 78899884 433 3344445 454 78999999999999
Q ss_pred EEEcCCCC----ChhhHHHHHHhhh
Q 027311 204 VERYAPTT----SPLSIEVVLECLC 224 (225)
Q Consensus 204 ~~~~~g~~----~~~~l~~~l~~ll 224 (225)
++++.|.. +.+++.+.|+++.
T Consensus 155 ~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 155 QHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99986643 3677888887764
No 61
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=7.4e-28 Score=188.85 Aligned_cols=145 Identities=10% Similarity=0.113 Sum_probs=115.0
Q ss_pred cccCCCceecCeEEeCC---CCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDA---KGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~ 136 (225)
..+.+|+++|+|++.+. +|+.+++++++||++||+|| ++||++|+.+++.|++++++|++++++||+||+|
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D----- 91 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD----- 91 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 34578999999999975 56899999999999999999 9999999999999999999999889999999997
Q ss_pred CCCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC
Q 027311 137 EPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g 209 (225)
+.+.+++|+ +++ +.+||++. |.. ....+.|+...... + ..+|++||||++|+|++++.|
T Consensus 92 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l~--D~~-~~~~~~ygv~~~~~------g-~~~p~~~lID~~G~I~~~~~g 157 (211)
T 2pn8_A 92 ---SQFTHLAWI-NTPRRQGGLGPIRIPLLS--DLT-HQISKDYGVYLEDS------G-HTLRGLFIIDDKGILRQITLN 157 (211)
T ss_dssp ---CHHHHHHHH-TSCGGGTCCCSCSSCEEE--CTT-SHHHHHTTCEETTT------T-EECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHH-HHhhhccCccCCceEEEE--CCc-hHHHHHcCCcccCC------C-cccceEEEECCCCEEEEEEec
Confidence 778888898 666 78899884 433 33444553221110 1 258999999999999999866
Q ss_pred CC----ChhhHHHHHHhhh
Q 027311 210 TT----SPLSIEVVLECLC 224 (225)
Q Consensus 210 ~~----~~~~l~~~l~~ll 224 (225)
.. +.+++.+.|++|.
T Consensus 158 ~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 158 DLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp CTTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhh
Confidence 43 4467787777764
No 62
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.95 E-value=6.6e-28 Score=179.27 Aligned_cols=140 Identities=21% Similarity=0.271 Sum_probs=120.5
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCH
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
.+.+|+++|+|++++.+|+.+++++++ |++||+||++||++|+.+++.|+++++++ ++.+++|++| ..++.
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d-----~~~~~ 74 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISRE-----PRDTR 74 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECC-----TTCCH
T ss_pred cCCCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCC-----CcccH
Confidence 457999999999999999999999999 99999999999999999999999999999 5999999995 22388
Q ss_pred HHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHH
Q 027311 142 EQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLE 221 (225)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~ 221 (225)
+.+++|+ ++++.+|+++. |. ......+.+. +++.++|++||||++|+|++++.|..+.+++++.|+
T Consensus 75 ~~~~~~~-~~~~~~~~~~~--d~-~~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 140 (154)
T 3ia1_A 75 EVVLEYM-KTYPRFIPLLA--SD-RDRPHEVAAR----------FKVLGQPWTFVVDREGKVVALFAGRAGREALLDALL 140 (154)
T ss_dssp HHHHHHH-TTCTTEEECBC--CS-SCCHHHHHTT----------SSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCccccc--cc-ccchHHHHHH----------hCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHH
Confidence 9999998 88899999883 31 1122223322 288899999999999999999999999999999999
Q ss_pred hhh
Q 027311 222 CLC 224 (225)
Q Consensus 222 ~ll 224 (225)
+++
T Consensus 141 ~~~ 143 (154)
T 3ia1_A 141 LAG 143 (154)
T ss_dssp HTT
T ss_pred hcc
Confidence 876
No 63
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.95 E-value=1.8e-27 Score=185.34 Aligned_cols=137 Identities=16% Similarity=0.224 Sum_probs=116.4
Q ss_pred cCCCceecCeEEeCC--CC--CeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDA--KG--QDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G--~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~ 137 (225)
..+|+++|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|+++++++++||+|
T Consensus 6 ~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D------ 79 (202)
T 1uul_A 6 AEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD------ 79 (202)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred ccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC------
Confidence 478999999999998 78 899999999999999999 9999999999999999999999889999999998
Q ss_pred CCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccc------cceeEEEECCCCcEE
Q 027311 138 PGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVV 204 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~I~ 204 (225)
+.+.+++|+ +++ +++||++. |.. ....+.| ++. ++|++||||++|+|+
T Consensus 80 --~~~~~~~~~-~~~~~~~~~~~~~~p~l~--D~~-~~~~~~y-------------gv~~~~~g~~~P~~~lid~~G~i~ 140 (202)
T 1uul_A 80 --SEYSHLAWT-SIERKRGGLGQMNIPILA--DKT-KCIMKSY-------------GVLKEEDGVAYRGLFIIDPKQNLR 140 (202)
T ss_dssp --CHHHHHHHH-HSCGGGTCCCSCSSCEEE--CTT-CHHHHHH-------------TCEETTTTEECEEEEEECTTSBEE
T ss_pred --CHHHHHHHH-HHHHhhCCCCCCceeEEE--CCc-hHHHHHc-------------CCccCCCCceeeEEEEECCCCEEE
Confidence 678888888 666 78899884 433 3344455 444 789999999999999
Q ss_pred EEcCCCCC----hhhHHHHHHhhh
Q 027311 205 ERYAPTTS----PLSIEVVLECLC 224 (225)
Q Consensus 205 ~~~~g~~~----~~~l~~~l~~ll 224 (225)
+++.|..+ .+++.+.|+++.
T Consensus 141 ~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 141 QITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99876543 467888887764
No 64
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.95 E-value=1.7e-27 Score=185.30 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=114.5
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
..+.+|+++|+|+++|.+|+.++|++++||++||+|| ++||++|+.+++.|++++++| ++++|++||.|
T Consensus 50 ~~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D-------- 119 (200)
T 3zrd_A 50 KLPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD-------- 119 (200)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS--------
T ss_pred ccCCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC--------
Confidence 3468999999999999999999999999999999999 779999999999999999999 67999999988
Q ss_pred CHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC--CChhhH
Q 027311 140 DNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT--TSPLSI 216 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~--~~~~~l 216 (225)
+.+.+++|+ +++++ +|+++. |.......+.|+...... ... ++ +.|++||||++|+|++++.+. ....++
T Consensus 120 ~~~~~~~~~-~~~~~~~f~~l~--D~~~~~~~~~ygv~~~~~-~~~--g~-~~p~~~lID~~G~I~~~~~~~~~~~~~~~ 192 (200)
T 3zrd_A 120 LPFAQSRFC-GAEGLSNVITLS--TLRGADFKQAYGVAITEG-PLA--GL-TARAVVVLDGQDNVIYSELVNEITTEPNY 192 (200)
T ss_dssp CHHHHTTCT-TTTTCTTEEEEE--TTSCTHHHHHTTCEECSS-TTT--TS-BCCEEEEECTTSBEEEEEECSBTTSCCCH
T ss_pred CHHHHHHHH-HHcCCCCceEEe--cCchHHHHHHhCceeecc-cCC--Cc-cccEEEEECCCCeEEEEEecCCcccCCCH
Confidence 788888888 78899 999884 542334455554332111 001 21 579999999999999997653 223356
Q ss_pred HHHHHhh
Q 027311 217 EVVLECL 223 (225)
Q Consensus 217 ~~~l~~l 223 (225)
++.|+.|
T Consensus 193 ~~~l~~L 199 (200)
T 3zrd_A 193 DAALAAL 199 (200)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 6666554
No 65
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.95 E-value=1.6e-27 Score=185.41 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=116.4
Q ss_pred cCCCcee--cCeEEeCCCCCeecCCccCCCEEEEEEcccCCCC-ChHhHHHHHHHHHHHhc---CCeEEEEEecCCCCCC
Q 027311 63 SQSKTSV--HDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGL-TNSNYTELSQLYDKYKN---QGLEILAFPCNQFGAQ 136 (225)
Q Consensus 63 ~~~g~~~--p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~-C~~~~~~l~~l~~~~~~---~~~~iv~Is~d~~~~~ 136 (225)
..+|+++ |+|+++|.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++++++||+| +
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D----~ 88 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD----P 88 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC----T
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC----C
Confidence 4677775 9999999999999999999999999999999997 99999999999999975 37999999998 3
Q ss_pred CCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCC---CCCCCccccceeEEEECCCCcEEEEcCCCCCh
Q 027311 137 EPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKG---GLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP 213 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~ 213 (225)
+.|+.+.+++|+ ++++.+|+.+.+.........+.|+....... ...++.+.+.|++||||++|+|++++.|..++
T Consensus 89 ~~d~~~~~~~~~-~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~ 167 (200)
T 2b7k_A 89 ARDSPAVLKEYL-SDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDE 167 (200)
T ss_dssp TTCCHHHHHHHH-TTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCT
T ss_pred CCCCHHHHHHHH-HHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCH
Confidence 456889999998 78888888764211111112223322100000 01123456778999999999999999988888
Q ss_pred hhHHHHHHhhh
Q 027311 214 LSIEVVLECLC 224 (225)
Q Consensus 214 ~~l~~~l~~ll 224 (225)
+++.+.|+++|
T Consensus 168 ~~~~~~i~~~l 178 (200)
T 2b7k_A 168 KTGVDKIVEHV 178 (200)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877765
No 66
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.95 E-value=7e-28 Score=181.88 Aligned_cols=145 Identities=13% Similarity=0.127 Sum_probs=115.3
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccC-CCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQ-CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~tw-C~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
....+|+++|+|++++.+|+.+++++++||++||+||++| |++|+.+++.|++++++| .++++++|+.|
T Consensus 16 ~~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d-------- 85 (167)
T 2jsy_A 16 QEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD-------- 85 (167)
T ss_dssp CCCCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS--------
T ss_pred CccCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC--------
Confidence 3468999999999999999999999999999999999999 999999999999999999 56999999998
Q ss_pred CHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC-----CCh
Q 027311 140 DNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-----TSP 213 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~-----~~~ 213 (225)
+.+.+++|+ ++++. +||++. |.......+.|+..... . ++ ..|++||||++|+|++++.|. .+.
T Consensus 86 ~~~~~~~~~-~~~~~~~~~~~~--d~~~~~~~~~~~v~~~~----~--g~-~~p~~~lid~~G~i~~~~~g~~~~~~~~~ 155 (167)
T 2jsy_A 86 LPFAQARWC-GANGIDKVETLS--DHRDMSFGEAFGVYIKE----L--RL-LARSVFVLDENGKVVYAEYVSEATNHPNY 155 (167)
T ss_dssp SGGGTSCCG-GGSSCTTEEEEE--GGGTCHHHHHTTCBBTT----T--CS-BCCEEEEECTTSCEEEEEECSBTTSCCCS
T ss_pred CHHHHHHHH-HhcCCCCceEee--CCchhHHHHHhCCcccc----C--Cc-eeeEEEEEcCCCcEEEEEecCCcCCCCCH
Confidence 556677787 78888 899884 41223344444221100 0 11 259999999999999998653 234
Q ss_pred hhHHHHHHhhhC
Q 027311 214 LSIEVVLECLCC 225 (225)
Q Consensus 214 ~~l~~~l~~ll~ 225 (225)
+++.+.|++|++
T Consensus 156 ~~l~~~l~~llk 167 (167)
T 2jsy_A 156 EKPIEAAKALVK 167 (167)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 789999998875
No 67
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.95 E-value=2.8e-27 Score=171.55 Aligned_cols=134 Identities=17% Similarity=0.200 Sum_probs=117.6
Q ss_pred CCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHH
Q 027311 65 SKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI 144 (225)
Q Consensus 65 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~ 144 (225)
+|.++|+|++++.+|+.+++++++||+++|.||++||++|+.+++.+++++++++ ++.+++|++|+ +.+.+
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~~~~ 71 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLD-------QVPAM 71 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------CHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCC-------CHHHH
Confidence 4678999999999999999999999999999999999999999999999999997 69999999885 78899
Q ss_pred HHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 145 QEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 145 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
++|+ +++++ +|+++. |... ...+.| ++.++|+++|+|++|+++ ++.|..+.+++.+.|+++
T Consensus 72 ~~~~-~~~~~~~~~~~~--d~~~-~~~~~~-------------~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 72 QEFV-NKYPVKTFTQLA--DTDG-SVWANF-------------GVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp HHHH-HHTTCTTSEEEE--CTTC-HHHHHT-------------TCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCceEEEE--cCCc-HHHHHc-------------CCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHH
Confidence 9998 78888 899873 4332 233333 888999999999999999 999988999999999998
Q ss_pred hC
Q 027311 224 CC 225 (225)
Q Consensus 224 l~ 225 (225)
++
T Consensus 134 l~ 135 (136)
T 1zzo_A 134 TS 135 (136)
T ss_dssp C-
T ss_pred hc
Confidence 74
No 68
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.95 E-value=2.4e-27 Score=183.10 Aligned_cols=136 Identities=17% Similarity=0.201 Sum_probs=114.5
Q ss_pred CCCceecCeEEeCC--CC--CeecCCcc-CCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCC
Q 027311 64 QSKTSVHDFSVKDA--KG--QDVDLSIY-KGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (225)
Q Consensus 64 ~~g~~~p~f~l~~~--~G--~~~~l~~~-~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~ 137 (225)
++|+++|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|++++++|++||+|
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------ 74 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------ 74 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC------
Confidence 37899999999999 99 99999999 9999999999 9999999999999999999999889999999998
Q ss_pred CCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccc-----cceeEEEECCCCcEEE
Q 027311 138 PGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK-----WNFSKFLVDKEGNVVE 205 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~lid~~G~I~~ 205 (225)
+.+.+++|+ +++ +.+||++. |.. ....+.| ++. .+|++||||++|+|++
T Consensus 75 --~~~~~~~~~-~~~~~~~~~~~~~~~~l~--D~~-~~~~~~~-------------gv~~~~g~~~P~~~liD~~G~i~~ 135 (192)
T 2h01_A 75 --SKFTHLAWK-KTPLSQGGIGNIKHTLIS--DIS-KSIARSY-------------DVLFNESVALRAFVLIDKQGVVQH 135 (192)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSEEEE--CTT-SHHHHHT-------------TCEETTTEECCEEEEECTTSBEEE
T ss_pred --CHHHHHHHH-HhHHhhCCccCCCcCeEE--CCc-HHHHHHh-------------CCcCcCCceeeEEEEEcCCCEEEE
Confidence 678888888 666 78899884 433 3344445 555 7899999999999999
Q ss_pred EcCCCC----ChhhHHHHHHhhh
Q 027311 206 RYAPTT----SPLSIEVVLECLC 224 (225)
Q Consensus 206 ~~~g~~----~~~~l~~~l~~ll 224 (225)
++.|.. +.+++.+.|+++.
T Consensus 136 ~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 136 LLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp EEEGGGSSGGGHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCHHHHHHHHHHHh
Confidence 987743 2466777777653
No 69
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.95 E-value=1.3e-27 Score=179.15 Aligned_cols=125 Identities=10% Similarity=0.198 Sum_probs=106.6
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCC--EEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGK--LLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk--~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
.+.+|+.+|+|++.|.+|+.+++++++|| ++||+|| ++|||+|+.++|.|+++++++++++ +|++|+.|
T Consensus 6 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d------- 77 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD------- 77 (159)
T ss_dssp CCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC-------
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC-------
Confidence 45799999999999999999999999887 8999987 9999999999999999999999989 99999988
Q ss_pred CCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccc------eeEEEECCCCcEEEEcCCCCC
Q 027311 139 GDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWN------FSKFLVDKEGNVVERYAPTTS 212 (225)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~------P~~~lid~~G~I~~~~~g~~~ 212 (225)
+.+.+++|+ ++++++||++. |.+ ....+.| ++... |++||| ++|+|++++.|..+
T Consensus 78 -~~~~~~~~~-~~~~~~~~~l~--D~~-~~~~~~~-------------gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~ 138 (159)
T 2a4v_A 78 -SVTSQKKFQ-SKQNLPYHLLS--DPK-REFIGLL-------------GAKKTPLSGSIRSHFIF-VDGKLKFKRVKISP 138 (159)
T ss_dssp -CHHHHHHHH-HHHTCSSEEEE--CTT-CHHHHHH-------------TCBSSSSSCBCCEEEEE-ETTEEEEEEESCCH
T ss_pred -CHHHHHHHH-HHhCCCceEEE--CCc-cHHHHHh-------------CCcccccCCccceEEEE-cCCEEEEEEccCCc
Confidence 778899998 78899999984 433 3344455 33333 489999 99999999988654
Q ss_pred h
Q 027311 213 P 213 (225)
Q Consensus 213 ~ 213 (225)
.
T Consensus 139 ~ 139 (159)
T 2a4v_A 139 E 139 (159)
T ss_dssp H
T ss_pred c
Confidence 4
No 70
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.95 E-value=1.6e-27 Score=188.44 Aligned_cols=134 Identities=10% Similarity=0.187 Sum_probs=106.5
Q ss_pred cccCCCceecCeEEeCC---CCCeecCCccCCCEEEEEEcc-cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDA---KGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~F~~-twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~ 136 (225)
..+.+|+++|+|++.++ +|+.+++++++||++||+||+ +||++|+.++|.|++++++|++++++||+||+|
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D----- 112 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD----- 112 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 45689999999999965 559999999999999999996 999999999999999999999989999999998
Q ss_pred CCCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC
Q 027311 137 EPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g 209 (225)
+.+...+|. +++ +.+|+++. |.+ ....+.|+...... + ..+|++||||++|+|++++.|
T Consensus 113 ---~~~~~~~~~-~~~~~~~~~~~~~~~~l~--D~~-~~~~~~ygv~~~~~------g-~~~P~~~lID~~G~I~~~~~g 178 (222)
T 3ztl_A 113 ---SQYSHLAWD-NLDRKSGGLGHMKIPLLA--DRK-QEISKAYGVFDEED------G-NAFRGLFIIDPNGILRQITIN 178 (222)
T ss_dssp ---CHHHHHHHH-HSCGGGTSCCSCSSCEEE--CSS-SHHHHHTTCBCTTT------S-SBCEEEEEECTTSEEEEEEEE
T ss_pred ---CHHHHHHHH-HHhhhhccccccceeEEe--CCc-hHHHHHcCCeecCC------C-CccceEEEECCCCeEEEEEec
Confidence 677788887 554 88999984 443 33444452211100 1 168999999999999999877
Q ss_pred CCCh
Q 027311 210 TTSP 213 (225)
Q Consensus 210 ~~~~ 213 (225)
..+.
T Consensus 179 ~~~~ 182 (222)
T 3ztl_A 179 DKPV 182 (222)
T ss_dssp CTTB
T ss_pred CCCC
Confidence 6544
No 71
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.95 E-value=3.6e-27 Score=171.25 Aligned_cols=132 Identities=16% Similarity=0.263 Sum_probs=115.5
Q ss_pred ceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHH
Q 027311 67 TSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQE 146 (225)
Q Consensus 67 ~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~ 146 (225)
.++|+|++++.+|+.+++++++||+++|.||++||++|+.+++.+++++++++ ++.+++|+.|+ +.+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRA-------DVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------CHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCC-------CHHHHHH
Confidence 46899999999999999999999999999999999999999999999999997 69999999985 7899999
Q ss_pred HHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcC---CCCChhhHHHHHHhh
Q 027311 147 FACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYA---PTTSPLSIEVVLECL 223 (225)
Q Consensus 147 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~---g~~~~~~l~~~l~~l 223 (225)
|+ ++++.+|+++. |.... ..+.| ++.++|+++++|++|+++ ++. |..+.+++++.|+++
T Consensus 73 ~~-~~~~~~~~~~~--d~~~~-~~~~~-------------~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 73 FV-SKYNLNFTNLN--DADGV-IWARY-------------NVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HH-HHHTCCSEEEE--CTTSH-HHHHT-------------TCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred HH-HHcCCCceEEE--CCchh-HHHhc-------------CCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 98 78899999883 43322 33333 888899999999999999 998 988999999999998
Q ss_pred hC
Q 027311 224 CC 225 (225)
Q Consensus 224 l~ 225 (225)
++
T Consensus 135 l~ 136 (136)
T 1lu4_A 135 TS 136 (136)
T ss_dssp --
T ss_pred hC
Confidence 74
No 72
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.95 E-value=4e-27 Score=182.66 Aligned_cols=142 Identities=16% Similarity=0.240 Sum_probs=114.3
Q ss_pred cCCCceecCeEEeCC-CC--CeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDA-KG--QDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~-~G--~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
+.+|+++|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|+++++++++|++|
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------- 77 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD------- 77 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-------
Confidence 478999999999998 88 999999999999999999 9999999999999999999999889999999998
Q ss_pred CCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC
Q 027311 139 GDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (225)
Q Consensus 139 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~ 211 (225)
+.+...+|+ +++ +++||++. |.. ....+.|+...... + .++|++||||++|+|++++.|..
T Consensus 78 -~~~~~~~~~-~~~~~~~~~~~~~~p~l~--D~~-~~~~~~~gv~~~~~------~-~~~P~~~lid~~G~i~~~~~g~~ 145 (197)
T 1qmv_A 78 -SQFTHLAWI-NTPRKEGGLGPLNIPLLA--DVT-RRLSEDYGVLKTDE------G-IAYRGLFIIDGKGVLRQITVNDL 145 (197)
T ss_dssp -CHHHHHHHH-TSCGGGTCCCSCSSCEEE--CTT-CHHHHHTTCEETTT------T-EECEEEEEECTTSBEEEEEEECT
T ss_pred -CHHHHHHHH-HHHHhhCCCCCCceEEEE--CCc-HHHHHHcCCccCCC------C-ceeeEEEEECCCCcEEEEEeCCC
Confidence 667788887 555 78899883 433 23444452211100 0 16899999999999999987754
Q ss_pred C----hhhHHHHHHhh
Q 027311 212 S----PLSIEVVLECL 223 (225)
Q Consensus 212 ~----~~~l~~~l~~l 223 (225)
+ .+++.+.|+++
T Consensus 146 ~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 146 PVGRSVDEALRLVQAF 161 (197)
T ss_dssp TBCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhc
Confidence 3 46777777765
No 73
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.1e-27 Score=199.00 Aligned_cols=145 Identities=19% Similarity=0.250 Sum_probs=126.1
Q ss_pred cccCCCceecCeE-----EeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCC
Q 027311 61 MASQSKTSVHDFS-----VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGA 135 (225)
Q Consensus 61 ~~~~~g~~~p~f~-----l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~ 135 (225)
....+|.++|+|+ +.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|++++++|++|++|.+.
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~- 127 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA- 127 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG-
T ss_pred cccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc-
Confidence 4568999999999 9999999999999999999999999999999999999999999999888999999987421
Q ss_pred CCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhh
Q 027311 136 QEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLS 215 (225)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~ 215 (225)
..++.+++++|+ ++++++||++ .|.... ..+.| ++.++|++||||++|+|++++.|..+.++
T Consensus 128 -~~d~~~~~~~~~-~~~~l~fpv~--~D~~~~-l~~~y-------------gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~ 189 (352)
T 2hyx_A 128 -FEKVPGNVAKGA-ANLGISYPIA--LDNNYA-TWTNY-------------RNRYWPAEYLIDATGTVRHIKFGEGDYNV 189 (352)
T ss_dssp -GGGCHHHHHHHH-HHHTCCSCEE--ECTTSH-HHHHT-------------TCCEESEEEEECTTSBEEEEEESBCCHHH
T ss_pred -ccCCHHHHHHHH-HHcCCCccEE--eCCcHH-HHHHc-------------CCCccCEEEEEeCCCeEEEEEcCCCCHHH
Confidence 234789999999 7889999987 343322 33333 88899999999999999999999888999
Q ss_pred HHHHHHhhh
Q 027311 216 IEVVLECLC 224 (225)
Q Consensus 216 l~~~l~~ll 224 (225)
+++.|+++|
T Consensus 190 l~~~I~~lL 198 (352)
T 2hyx_A 190 TETLVRQLL 198 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999886
No 74
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.95 E-value=7.4e-27 Score=184.30 Aligned_cols=138 Identities=12% Similarity=0.147 Sum_probs=115.0
Q ss_pred ccCCCceecCeEEeC---CCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCC
Q 027311 62 ASQSKTSVHDFSVKD---AKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~---~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~ 137 (225)
.+.+|+++|+|++.+ .+|+.+++++++||++||+|| ++|||+|+.+++.|++++++|++++++|++|++|
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D------ 99 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD------ 99 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS------
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 457999999999985 578999999999999999999 9999999999999999999999889999999998
Q ss_pred CCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccc------cceeEEEECCCCcEE
Q 027311 138 PGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIK------WNFSKFLVDKEGNVV 204 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~I~ 204 (225)
+.+..++|+ +++ +.+||++. |.+ ....+.| ++. .+|++||||++|+|+
T Consensus 100 --~~~~~~~~~-~~~~~~~g~~~~~fp~l~--D~~-~~i~~~y-------------gv~~~~~g~~~P~~~liD~~G~I~ 160 (220)
T 1zye_A 100 --SHFSHLAWI-NTPRKNGGLGHMNIALLS--DLT-KQISRDY-------------GVLLEGPGLALRGLFIIDPNGVIK 160 (220)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSEEEE--CTT-SHHHHHT-------------TCEETTTTEECEEEEEECTTSBEE
T ss_pred --CHHHHHHHH-HHHHHhCCCcCCceEEEE--CCc-HHHHHHh-------------CCeecCCCcccceEEEECCCCEEE
Confidence 677888887 555 77899884 433 3344445 454 789999999999999
Q ss_pred EEcCCCC----ChhhHHHHHHhhh
Q 027311 205 ERYAPTT----SPLSIEVVLECLC 224 (225)
Q Consensus 205 ~~~~g~~----~~~~l~~~l~~ll 224 (225)
+++.|.. +.+++.+.|++|+
T Consensus 161 ~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 161 HLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHhh
Confidence 9887653 3467888887764
No 75
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.94 E-value=7.2e-27 Score=177.94 Aligned_cols=144 Identities=11% Similarity=0.080 Sum_probs=108.7
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccC-CCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQ-CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~tw-C~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
..+.+|+++|+|++++.+|+.+++++++||++||+||++| |++|+.++|.|++++++ +++++++|++|
T Consensus 16 ~~l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D-------- 84 (175)
T 1xvq_A 16 ELPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD-------- 84 (175)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS--------
T ss_pred CCCCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC--------
Confidence 3457999999999999999999999999999999999999 99999999999999998 56999999997
Q ss_pred CHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC--CCChhhH
Q 027311 140 DNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP--TTSPLSI 216 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g--~~~~~~l 216 (225)
+.+.+++|+ +++++ +|+++. |.+ ....+.|+...... ... + ...|++||||++|+|++++.| ..+..++
T Consensus 85 ~~~~~~~~~-~~~~~~~~~~l~--D~~-~~~~~~~gv~~~~~-~~~--g-~~~p~~~lid~~G~I~~~~~g~~~~~~~~~ 156 (175)
T 1xvq_A 85 LPFAQKRFC-GAEGTENVMPAS--AFR-DSFGEDYGVTIADG-PMA--G-LLARAIVVIGADGNVAYTELVPEIAQEPNY 156 (175)
T ss_dssp CHHHHTTCC-------CEEEEE--CTT-SSHHHHTTCBBCSS-TTT--T-SBCSEEEEECTTSBEEEEEECSBTTCCCCH
T ss_pred CHHHHHHHH-HHcCCCCceEee--CCH-HHHHHHhCCccccc-ccC--C-cccceEEEECCCCeEEEEEECCCcCCCCCH
Confidence 677888888 77888 899884 443 33445553322110 001 1 235999999999999999864 3344467
Q ss_pred HHHHHhh
Q 027311 217 EVVLECL 223 (225)
Q Consensus 217 ~~~l~~l 223 (225)
++.|+++
T Consensus 157 ~~~l~~l 163 (175)
T 1xvq_A 157 EAALAAL 163 (175)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777665
No 76
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.94 E-value=6.3e-27 Score=186.93 Aligned_cols=146 Identities=11% Similarity=0.155 Sum_probs=113.5
Q ss_pred cccccCCCceecCeEEeCC---CCCeecCCccCCCEEEEEEcc-cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCC
Q 027311 59 HTMASQSKTSVHDFSVKDA---KGQDVDLSIYKGKLLLIVNVA-SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFG 134 (225)
Q Consensus 59 ~~~~~~~g~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~F~~-twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~ 134 (225)
.+..+.+|+++|+|++.+. +|+.++|++++||++||+||+ +||++|+.+++.|++++++|+++|++|++||+|
T Consensus 44 ~~~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D--- 120 (240)
T 3qpm_A 44 HLSKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD--- 120 (240)
T ss_dssp EECSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS---
T ss_pred ccCcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC---
Confidence 3455689999999998754 467999999999999999998 999999999999999999999999999999998
Q ss_pred CCCCCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEc
Q 027311 135 AQEPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY 207 (225)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~ 207 (225)
+.+...+|+ +++ +++||++. |.+ ....+.|+...... + ..+|++||||++|+|++++
T Consensus 121 -----~~~~~~~~~-~~~~~~~~~~~~~fp~l~--D~~-~~v~~~ygv~~~~~------g-~~~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 121 -----SQFTHLAWI-ITPRKQGGLGPMKIPLLS--DLT-HQISKDYGVYLEDQ------G-HTLRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp -----CHHHHHHHH-HSCGGGTCCCSCSSCEEE--CTT-SHHHHHTTCEETTT------T-EECEEEEEECTTSBEEEEE
T ss_pred -----CHHHHHHHH-HHHHhhcCCCCCceeEEe--Cch-HHHHHHhCCccccC------C-CccceEEEEcCCCeEEEEE
Confidence 678888887 554 78999984 444 34455553322111 1 1579999999999999997
Q ss_pred CCCCC----hhhHHHHHHhh
Q 027311 208 APTTS----PLSIEVVLECL 223 (225)
Q Consensus 208 ~g~~~----~~~l~~~l~~l 223 (225)
.+..+ .+++.+.|+++
T Consensus 185 ~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 185 MNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp EECTTBCCCHHHHHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHHHh
Confidence 66433 34555555543
No 77
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=2.6e-27 Score=178.29 Aligned_cols=133 Identities=15% Similarity=0.146 Sum_probs=108.3
Q ss_pred cCCCceecCeEEe--CCCC--CeecCCc-cCCCEEEEEEc-ccCCCCCh-HhHHHHHHHHHHHhcCCeE-EEEEecCCCC
Q 027311 63 SQSKTSVHDFSVK--DAKG--QDVDLSI-YKGKLLLIVNV-ASQCGLTN-SNYTELSQLYDKYKNQGLE-ILAFPCNQFG 134 (225)
Q Consensus 63 ~~~g~~~p~f~l~--~~~G--~~~~l~~-~~gk~vlv~F~-~twC~~C~-~~~~~l~~l~~~~~~~~~~-iv~Is~d~~~ 134 (225)
+.+|+.+|+|++. +.+| +.+++++ ++||++||+|| ++|||+|. .++|.|++++++++++|++ |++||.|
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d--- 80 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN--- 80 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS---
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC---
Confidence 4789999999986 8999 9999999 89999999999 89999999 9999999999999988999 9999988
Q ss_pred CCCCCCHHHHHHHHHhhcCC--CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC
Q 027311 135 AQEPGDNEQIQEFACTRFKA--EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~ 210 (225)
+.+.+++|+ +++++ +||++. |.+ ....+.|+...... ..|.++.+.|++|||| +|+|++.+.+.
T Consensus 81 -----~~~~~~~~~-~~~~~~~~~~~l~--D~~-~~~~~~~gv~~~~~--~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 -----DPFVMKAWA-KSYPENKHVKFLA--DGS-ATYTHALGLELDLQ--EKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp -----CHHHHHHHH-HTCTTCSSEEEEE--CTT-SHHHHHTTCEEEET--TTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred -----CHHHHHHHH-HhcCCCCCeEEEE--CCC-chHHHHcCcccccc--cCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 778899998 78888 899884 544 33444554321110 0111234589999999 99999998776
No 78
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=5.7e-27 Score=175.30 Aligned_cols=138 Identities=20% Similarity=0.325 Sum_probs=114.9
Q ss_pred cccccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 59 HTMASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 59 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
....+.+|+.+|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|+++++++++.++.+++|+.|.
T Consensus 11 ~~~~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------ 84 (158)
T 3hdc_A 11 DAPLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK------ 84 (158)
T ss_dssp CSCCCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS------
T ss_pred CCcccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH------
Confidence 34456899999999999999999999999999999999999999999999999999999998889999999873
Q ss_pred CCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCCh--hhH
Q 027311 139 GDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP--LSI 216 (225)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~--~~l 216 (225)
++++|. ++++.+|+++. |..+ ...+.| ++.++|++||||++|+|++++.|..+. .++
T Consensus 85 ----~~~~~~-~~~~~~~~~~~--d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~ 143 (158)
T 3hdc_A 85 ----RFPEKY-RRAPVSFNFLS--DATG-QVQQRY-------------GANRLPDTFIVDRKGIIRQRVTGGIEWDAPKV 143 (158)
T ss_dssp ----SCCGGG-GGCCCSCEEEE--CTTS-HHHHHT-------------TCCSSSEEEEECTTSBEEEEEESCCCTTSHHH
T ss_pred ----HHHHHH-HHcCCCceEEE--CchH-HHHHHh-------------CCCCcceEEEEcCCCCEEEEEeCCCccchHHH
Confidence 345566 78899999884 4332 233334 888999999999999999999987654 456
Q ss_pred HHHHHhh
Q 027311 217 EVVLECL 223 (225)
Q Consensus 217 ~~~l~~l 223 (225)
.+.+++.
T Consensus 144 ~~~~~~~ 150 (158)
T 3hdc_A 144 VSYLKSL 150 (158)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 6655543
No 79
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.94 E-value=2.1e-26 Score=166.85 Aligned_cols=136 Identities=20% Similarity=0.311 Sum_probs=115.1
Q ss_pred eecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHH
Q 027311 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEF 147 (225)
Q Consensus 68 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~ 147 (225)
++|+|++++.+|+.+++++++||++||.||++||++|+.+++.+++++++++ .++.+++|+.+.. ...++.+.+.+|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~~--~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPGH--KGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTTS--TTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCCC--CchhhHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999965 4599999965432 234588999999
Q ss_pred HHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 148 ACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 148 ~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
. ++++. +|+++ .|... ...+.| ++.++|+++|+|++|+|++++.|..+.+++.+.|+++
T Consensus 78 ~-~~~~~~~~~~~--~d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 Y-KGLDYKNLPVL--VDPSG-KLLETY-------------GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp H-TTCCCTTCCEE--ECTTC-HHHHHT-------------TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred H-hhcCCCCeeEE--ECcch-HHHHHc-------------CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 8 77788 89987 34333 233333 8889999999999999999999999999999999875
No 80
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.94 E-value=2.1e-26 Score=185.14 Aligned_cols=145 Identities=9% Similarity=0.129 Sum_probs=114.2
Q ss_pred ccccCCCceecCeEEeC---CCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCC
Q 027311 60 TMASQSKTSVHDFSVKD---AKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGA 135 (225)
Q Consensus 60 ~~~~~~g~~~p~f~l~~---~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~ 135 (225)
...+.+|+++|+|++.+ .+|+.++|++++||++||+|| ++||++|..+++.|++++++|+++|++||+||+|
T Consensus 59 ~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D---- 134 (254)
T 3tjj_A 59 LSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD---- 134 (254)
T ss_dssp CCCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS----
T ss_pred ccccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC----
Confidence 45568999999999774 467899999999999999999 9999999999999999999999999999999998
Q ss_pred CCCCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcC
Q 027311 136 QEPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYA 208 (225)
Q Consensus 136 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~ 208 (225)
+.+...+|+ +++ +++||++. |.+ ....+.|+...... + ..+|++||||++|+|++++.
T Consensus 135 ----~~~~~~~~~-~~~~~~~g~~~~~fp~l~--D~~-~~va~~ygv~~~~~------g-~~~p~tflID~~G~I~~~~~ 199 (254)
T 3tjj_A 135 ----SQFTHLAWI-NTPRRQGGLGPIRIPLLS--DLT-HQISKDYGVYLEDS------G-HTLRGLFIIDDKGILRQITL 199 (254)
T ss_dssp ----CHHHHHHHH-TSCGGGTSCCSCSSCEEE--CTT-SHHHHHHTCEETTT------T-EECEEEEEECTTSBEEEEEE
T ss_pred ----CHHHHHHHH-HHHHHhcCCcccccceee--CcH-HHHHHHcCCccccC------C-CccceEEEECCCCeEEEEEe
Confidence 778888887 554 78999984 544 34555564332111 1 24799999999999999977
Q ss_pred CCCC----hhhHHHHHHhh
Q 027311 209 PTTS----PLSIEVVLECL 223 (225)
Q Consensus 209 g~~~----~~~l~~~l~~l 223 (225)
+..+ .+++.+.|+++
T Consensus 200 ~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 200 NDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp ECTTCCCCHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHhh
Confidence 6432 34555555543
No 81
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=8.2e-29 Score=185.37 Aligned_cols=140 Identities=19% Similarity=0.295 Sum_probs=115.4
Q ss_pred ccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHH-HHHHHh-cCCeEEEEEecCCCCCCCCC
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQ-LYDKYK-NQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~-l~~~~~-~~~~~iv~Is~d~~~~~~~~ 139 (225)
.+.+|+.+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++ ++++++ +.++++++|++|+
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~------- 78 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDE------- 78 (159)
Confidence 4578999999999999999999999999999999999999999999999998 999998 6789999999884
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHH
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVV 219 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~ 219 (225)
+.+.+++|. ++++.+||++. |..+. ..+.|+. .+.++|+++|||++|+|++++.| .+++++++.
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~~--d~~~~-~~~~~~~-----------~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~ 142 (159)
T 2ls5_A 79 PLEKVLAFA-KSTGVTYPLGL--DPGAD-IFAKYAL-----------RDAGITRNVLIDREGKIVKLTRL-YNEEEFASL 142 (159)
Confidence 456677887 78899999884 43333 3333411 25668999999999999999887 456677777
Q ss_pred HHhhh
Q 027311 220 LECLC 224 (225)
Q Consensus 220 l~~ll 224 (225)
|+++.
T Consensus 143 l~~l~ 147 (159)
T 2ls5_A 143 VQQIN 147 (159)
Confidence 77654
No 82
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.94 E-value=1.2e-26 Score=175.07 Aligned_cols=137 Identities=18% Similarity=0.232 Sum_probs=116.4
Q ss_pred cccCCCceecCeEEeCC--CCCeecCCcc-CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDA--KGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQE 137 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~--~G~~~~l~~~-~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~ 137 (225)
....+|+++|+|++.+. +|+.++++++ +||++||+||++||++|+.++|.+++++++ ++.+++|++|+
T Consensus 20 ~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~----- 90 (168)
T 2b1k_A 20 ESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKD----- 90 (168)
T ss_dssp CCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESC-----
T ss_pred cccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCC-----
Confidence 34579999999999999 9999999985 999999999999999999999999998875 69999999885
Q ss_pred CCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 027311 138 PGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIE 217 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~ 217 (225)
+.+.+++|+ ++++.+|+.+. .|... .....| ++.++|++||||++|+|++++.|..+.+++.
T Consensus 91 --~~~~~~~~~-~~~~~~~~~~~-~d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 152 (168)
T 2b1k_A 91 --DRQKAISWL-KELGNPYALSL-FDGDG-MLGLDL-------------GVYGAPETFLIDGNGIIRYRHAGDLNPRVWE 152 (168)
T ss_dssp --CHHHHHHHH-HHHCCCCSEEE-EETTC-HHHHHH-------------TCCSSSEEEEECTTSBEEEEEESCCCHHHHH
T ss_pred --ChHHHHHHH-HHcCCCCceee-ECcch-HHHHHc-------------CccccCEEEEECCCCeEEEEEeCCCCHHHHH
Confidence 778899998 78899998532 34332 233334 8888999999999999999999988888888
Q ss_pred HHHHhhh
Q 027311 218 VVLECLC 224 (225)
Q Consensus 218 ~~l~~ll 224 (225)
+.|++++
T Consensus 153 ~~l~~~l 159 (168)
T 2b1k_A 153 EEIKPLW 159 (168)
T ss_dssp HTTHHHH
T ss_pred HHHHHHH
Confidence 8888775
No 83
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=1.4e-26 Score=175.10 Aligned_cols=133 Identities=11% Similarity=0.171 Sum_probs=106.4
Q ss_pred cCCCceecCeEEe-CCCCCeecCCcc-CCCEEEEEEc-ccCCCCChH-hHHHHHHHHHHHhcCCe-EEEEEecCCCCCCC
Q 027311 63 SQSKTSVHDFSVK-DAKGQDVDLSIY-KGKLLLIVNV-ASQCGLTNS-NYTELSQLYDKYKNQGL-EILAFPCNQFGAQE 137 (225)
Q Consensus 63 ~~~g~~~p~f~l~-~~~G~~~~l~~~-~gk~vlv~F~-~twC~~C~~-~~~~l~~l~~~~~~~~~-~iv~Is~d~~~~~~ 137 (225)
+.+|+++|+|+++ +.+|+.++|+++ +||++||+|| ++|||+|.. ++|.|++++++++++|+ +|++||.|
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d------ 76 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN------ 76 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 4789999999999 999999999998 9999988886 999999999 99999999999999999 99999987
Q ss_pred CCCHHHHHHHHHhhcCCC--cceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC
Q 027311 138 PGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~ 210 (225)
+.+.+++|+ ++++++ ||++. |.++ ...+.|+...... ...| .....|++||| ++|+|++++.+.
T Consensus 77 --~~~~~~~~~-~~~~~~~~fp~l~--D~~~-~~~~~~gv~~~~~-~~~g-~~~~~p~t~lI-~~G~I~~~~~~~ 142 (167)
T 2wfc_A 77 --DSFVMDAWG-KAHGADDKVQMLA--DPGG-AFTKAVDMELDLS-AVLG-NVRSKRYSLVI-EDGVVTKVNVEP 142 (167)
T ss_dssp --CHHHHHHHH-HHTTCTTTSEEEE--CTTS-HHHHHTTCEECCH-HHHS-SCEECCEEEEE-ETTEEEEEEECT
T ss_pred --CHHHHHHHH-HhcCCCcceEEEE--CCCC-cHHHHcCCccccc-cccC-cccceEEEEEE-eCCEEEEEEecC
Confidence 678889998 778888 99984 5433 3444453321100 0001 12345999999 999999997764
No 84
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.94 E-value=1.7e-26 Score=175.61 Aligned_cols=147 Identities=17% Similarity=0.204 Sum_probs=114.1
Q ss_pred cCCCceecCeEEe-CCCCCeecCCc-cCCCEEEE-EEcccCCCCCh-HhHHHHHHHHHHHhcCCeEEEE-EecCCCCCCC
Q 027311 63 SQSKTSVHDFSVK-DAKGQDVDLSI-YKGKLLLI-VNVASQCGLTN-SNYTELSQLYDKYKNQGLEILA-FPCNQFGAQE 137 (225)
Q Consensus 63 ~~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vlv-~F~~twC~~C~-~~~~~l~~l~~~~~~~~~~iv~-Is~d~~~~~~ 137 (225)
..+|+++|+|++. +.+|+.++|++ ++||++|| +||++|||+|. .|+|.|++++++|+++|+++|+ ||.|
T Consensus 15 ~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D------ 88 (173)
T 3mng_A 15 IKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN------ 88 (173)
T ss_dssp CCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS------
T ss_pred CCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC------
Confidence 4799999999999 99999999999 59996655 55699999999 5999999999999999999997 9988
Q ss_pred CCCHHHHHHHHHhhcCCC--cceeeeecCCCCCchhhhhhccccCC-CCCCCccccceeEEEECCCCcEEEEcCCCC---
Q 027311 138 PGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKG-GLFGDSIKWNFSKFLVDKEGNVVERYAPTT--- 211 (225)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~P~~~lid~~G~I~~~~~g~~--- 211 (225)
+.+.+++|+ ++++.+ ||++ .|.++ ...+.|+....... +..| +....|++|||| +|+|++.+.+..
T Consensus 89 --~~~~~~~f~-~~~~~~~~fp~l--~D~~~-~va~~yGv~~~~~~~~~~g-~~~~~r~tfvID-dG~I~~~~v~~~~~g 160 (173)
T 3mng_A 89 --DAFVTGEWG-RAHKAEGKVRLL--ADPTG-AFGKETDLLLDDSLVSIFG-NRRLKRFSMVVQ-DGIVKALNVEPDGTG 160 (173)
T ss_dssp --CHHHHHHHH-HHTTCTTTCEEE--ECTTC-HHHHHHTCBCCSTTHHHHS-SCCBCCEEEEEE-TTEEEEEEECTTSSC
T ss_pred --CHHHHHHHH-HHhCCCCceEEE--ECCCh-HHHHHhCCCcccccccccC-CcceEEEEEEEE-CCEEEEEEEeCCCCC
Confidence 788899998 788887 9998 45443 34555654322100 0011 234679999999 999999988754
Q ss_pred -ChhhHHHHHHhh
Q 027311 212 -SPLSIEVVLECL 223 (225)
Q Consensus 212 -~~~~l~~~l~~l 223 (225)
+..+.+..|++|
T Consensus 161 ~~~~~~~~vl~~l 173 (173)
T 3mng_A 161 LTCSLAPNIISQL 173 (173)
T ss_dssp SSTTSHHHHHHHC
T ss_pred cchHHHHHHHHhC
Confidence 345666666653
No 85
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.94 E-value=9.8e-27 Score=178.57 Aligned_cols=148 Identities=17% Similarity=0.158 Sum_probs=115.0
Q ss_pred cccCCCceecCeEEeCC--CC-CeecCCc-cCCCEE-EEEEcccCCCCChH-hHHHHHHHHHHHhcCCeE-EEEEecCCC
Q 027311 61 MASQSKTSVHDFSVKDA--KG-QDVDLSI-YKGKLL-LIVNVASQCGLTNS-NYTELSQLYDKYKNQGLE-ILAFPCNQF 133 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~--~G-~~~~l~~-~~gk~v-lv~F~~twC~~C~~-~~~~l~~l~~~~~~~~~~-iv~Is~d~~ 133 (225)
+.+++|+++|+|++.+. +| +.++|++ ++||++ |++||++|||+|+. |+|.|++++++|+++|++ |++||.|
T Consensus 24 ~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d-- 101 (184)
T 3uma_A 24 MTIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN-- 101 (184)
T ss_dssp SCCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS--
T ss_pred CcCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC--
Confidence 34689999999999998 99 9999999 899955 55677999999999 899999999999999999 9999998
Q ss_pred CCCCCCCHHHHHHHHHhhcCCC--cceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC
Q 027311 134 GAQEPGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (225)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~ 211 (225)
+.+.+++|+ ++++++ ||++. |.++ ...+.|+...... ..|.++...|++|||| +|+|++.+.+..
T Consensus 102 ------~~~~~~~f~-~~~~~~~~fp~l~--D~~~-~va~~yGv~~~~~--~~g~g~~~~r~tfiId-dG~I~~~~~~~~ 168 (184)
T 3uma_A 102 ------DLHVMGAWA-THSGGMGKIHFLS--DWNA-AFTKAIGMEIDLS--AGTLGIRSKRYSMLVE-DGVVKALNIEES 168 (184)
T ss_dssp ------CHHHHHHHH-HHHTCTTTSEEEE--CTTC-HHHHHTTCEEEEG--GGTCEEEECCEEEEEE-TTEEEEEEECSS
T ss_pred ------CHHHHHHHH-HHhCCCCceEEEE--cCch-HHHHHcCCceecc--ccCCcccceeEEEEEC-CCEEEEEEEeCC
Confidence 778889998 788998 99994 5443 3455564432211 0111345678999996 999999987643
Q ss_pred ----ChhhHHHHHHhh
Q 027311 212 ----SPLSIEVVLECL 223 (225)
Q Consensus 212 ----~~~~l~~~l~~l 223 (225)
+....++.|++|
T Consensus 169 ~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 169 PGQATASGAAAMLELL 184 (184)
T ss_dssp TTCCSTTSHHHHHHHC
T ss_pred CCCCcCCCHHHHHhhC
Confidence 335667766654
No 86
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.94 E-value=7.7e-27 Score=175.13 Aligned_cols=140 Identities=17% Similarity=0.186 Sum_probs=116.6
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHH
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~ 143 (225)
..|+.+| ++++.+|+.+++++++||++||+||++||++|+.++|.|++++++|+.+++++++|++|.. ...++.++
T Consensus 15 ~~~~~~p--~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~--~~~~~~~~ 90 (164)
T 2h30_A 15 TVPHTMS--TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGF--LHEKKDGE 90 (164)
T ss_dssp CHHHHHT--TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTS--TTCCCTTH
T ss_pred ccCCcCC--ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCC--ccccCHHH
Confidence 3455556 7899999999999999999999999999999999999999999999988999999999753 23346778
Q ss_pred HHHHHHhhcCCC-cceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 144 IQEFACTRFKAE-FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 144 ~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
+.+|. ++++.. +++. .|... ...+.| ++.++|++||||++|++++++.|..+.+++++.|++
T Consensus 91 ~~~~~-~~~~~~~~~~~--~d~~~-~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 153 (164)
T 2h30_A 91 FQKWY-AGLNYPKLPVV--TDNGG-TIAQNL-------------NISVYPSWALIGKDGDVQRIVKGSINEAQALALIRN 153 (164)
T ss_dssp HHHHH-TTSCCTTSCEE--ECTTC-HHHHHT-------------TCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHC
T ss_pred HHHHH-HhCCCCcceEE--EcCch-HHHHHc-------------CCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 88887 666766 6765 34332 233333 888999999999999999999999999999999998
Q ss_pred hh
Q 027311 223 LC 224 (225)
Q Consensus 223 ll 224 (225)
++
T Consensus 154 ~~ 155 (164)
T 2h30_A 154 PN 155 (164)
T ss_dssp TT
T ss_pred HH
Confidence 76
No 87
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.94 E-value=1.8e-26 Score=183.30 Aligned_cols=149 Identities=13% Similarity=0.196 Sum_probs=116.4
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCC-EEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGK-LLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk-~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
+.+|+.+|+|++.+.+| .+++++++|| ++||+|| ++|||+|..|++.|++++++|+++|++||+||+| +
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~ 73 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------N 73 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------C
Confidence 46899999999999999 8999999998 9999998 9999999999999999999999999999999998 6
Q ss_pred HHHHHHHHHh-----hc--CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC--
Q 027311 141 NEQIQEFACT-----RF--KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-- 211 (225)
Q Consensus 141 ~~~~~~~~~~-----~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~-- 211 (225)
.+..++|+.. ++ +++||++. |.++ ...+.|+..........|+ ...+|++||||++|+|++.+.+..
T Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~fpil~--D~~~-~va~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~~~~ 149 (233)
T 2v2g_A 74 VADHKEWSEDVKCLSGVKGDMPYPIIA--DETR-ELAVKLGMVDPDERTSTGM-PLTCRAVFIIGPDKKLKLSILYPATT 149 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCSSCSSCEEE--CTTC-HHHHHTTCEEEEEECTTCC-EEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HHHHHHHHHHHHHhhCcccCCceEEEE--CChH-HHHHHhCCcCcccccCCCc-ccccceEEEECCCCEEEEEEecCCCC
Confidence 7777888732 56 78999984 4433 3455665432211000011 225799999999999999876533
Q ss_pred --ChhhHHHHHHhhh
Q 027311 212 --SPLSIEVVLECLC 224 (225)
Q Consensus 212 --~~~~l~~~l~~ll 224 (225)
+.+++.+.|++|.
T Consensus 150 gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 150 GRNFSEILRVIDSLQ 164 (233)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 4567888887763
No 88
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.94 E-value=1.3e-26 Score=172.31 Aligned_cols=137 Identities=19% Similarity=0.277 Sum_probs=113.2
Q ss_pred ccCCCceecCeEEeCCCC--------CeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCC
Q 027311 62 ASQSKTSVHDFSVKDAKG--------QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQF 133 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G--------~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~ 133 (225)
...+|+.+|+|++++.+| +.+++++++||++||.||++||++|+.+++.|++++++ .++.+++|++|+
T Consensus 7 ~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~~- 82 (156)
T 1kng_A 7 SALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYKD- 82 (156)
T ss_dssp -----CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEESC-
T ss_pred hHHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECCC-
Confidence 347899999999999999 99999999999999999999999999999999999876 349999999885
Q ss_pred CCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCCh
Q 027311 134 GAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP 213 (225)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~ 213 (225)
+.+.+++|+ ++++.+|+.+. .|.. ....+.| ++.++|++|+||++|++++++.|..+.
T Consensus 83 ------~~~~~~~~~-~~~~~~~~~~~-~d~~-~~~~~~~-------------~v~~~P~~~~id~~G~i~~~~~g~~~~ 140 (156)
T 1kng_A 83 ------AADNARRFL-GRYGNPFGRVG-VDAN-GRASIEW-------------GVYGVPETFVVGREGTIVYKLVGPITP 140 (156)
T ss_dssp ------CHHHHHHHH-HHHCCCCSEEE-EETT-SHHHHHT-------------TCCSSCEEEEECTTSBEEEEEESCCCH
T ss_pred ------CHHHHHHHH-HHcCCCCceee-eCch-hHHHHhc-------------CcCccCeEEEEcCCCCEEEEEeCCCCH
Confidence 788999998 78899999432 3433 2233333 888999999999999999999998888
Q ss_pred hhHHHHHHhhh
Q 027311 214 LSIEVVLECLC 224 (225)
Q Consensus 214 ~~l~~~l~~ll 224 (225)
+++.+.|++++
T Consensus 141 ~~l~~~l~~~l 151 (156)
T 1kng_A 141 DNLRSVLLPQM 151 (156)
T ss_dssp HHHHHTHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887765
No 89
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.93 E-value=7.9e-26 Score=178.79 Aligned_cols=148 Identities=15% Similarity=0.158 Sum_probs=114.6
Q ss_pred cCCCceecCeEEeCCCCCeecCCccCCC-E-EEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGK-L-LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk-~-vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~ 140 (225)
+.+|+.+|+|++.+.+| .+++++++|| + +|++||++|||+|..+++.|++++++|+++|++||+||+| +
T Consensus 5 l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D--------~ 75 (224)
T 1prx_A 5 LLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID--------S 75 (224)
T ss_dssp CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------C
T ss_pred CCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------C
Confidence 46899999999999999 9999999998 4 5666789999999999999999999999999999999998 6
Q ss_pred HHHHHHHHHhh----------cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC
Q 027311 141 NEQIQEFACTR----------FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 141 ~~~~~~~~~~~----------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~ 210 (225)
.+..++|+ ++ ++++||++. |.++ ...+.|+.......+..|. ...+|++||||++|+|++.+.+.
T Consensus 76 ~~~~~~~~-~~i~~~~~~~~~~~~~fpil~--D~~~-~va~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~ 150 (224)
T 1prx_A 76 VEDHLAWS-KDINAYNSEEPTEKLPFPIID--DRNR-ELAILLGMLDPAEKDEKGM-PVTARVVFVFGPDKKLKLSILYP 150 (224)
T ss_dssp HHHHHHHH-HHHHHHTTSCCCSCCSSCEEE--CTTC-HHHHHTTSSCSCTTCSSSC-CTTCCEEEEECTTSBEEEEEECC
T ss_pred HHHHHHHH-HHHHHhhCcccccCcCcceee--cCch-HHHHHhCCCCcccccCCCc-cccceEEEEECCCCEEEEEEecC
Confidence 67777777 43 789999984 4433 3455565443211111111 23479999999999999998653
Q ss_pred C----ChhhHHHHHHhhh
Q 027311 211 T----SPLSIEVVLECLC 224 (225)
Q Consensus 211 ~----~~~~l~~~l~~ll 224 (225)
. +.+++.+.|++|.
T Consensus 151 ~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 151 ATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 3 4677888887764
No 90
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.93 E-value=4.5e-26 Score=179.70 Aligned_cols=149 Identities=18% Similarity=0.238 Sum_probs=113.9
Q ss_pred cCCCceecCeEEeCC--CCCeecCCccCCC-EE-EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDA--KGQDVDLSIYKGK-LL-LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~--~G~~~~l~~~~gk-~v-lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
+.+|+.+|+|++.+. +| .+++++++|| ++ |++||++|||+|..|++.|++++++|+++|+++|+||+|
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D------- 74 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN------- 74 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------
Confidence 478999999999999 99 8999999998 54 445689999999999999999999999999999999998
Q ss_pred CCHHHHHHHHH------hhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC--
Q 027311 139 GDNEQIQEFAC------TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT-- 210 (225)
Q Consensus 139 ~~~~~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~-- 210 (225)
+.+..++|.. .+++++||++. |.++ ...+.|+..........|+ ...+|++||||++|+|++.+.+.
T Consensus 75 -~~~~~~~~~~~i~~~~~~~~~~fpil~--D~~~-~va~~ygv~~~~~~~~~g~-~~~~p~~flID~~G~I~~~~~~~~~ 149 (220)
T 1xcc_A 75 -SKESHDKWIEDIKYYGKLNKWEIPIVC--DESR-ELANKLKIMDEQEKDITGL-PLTCRCLFFISPEKKIKATVLYPAT 149 (220)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCCCCCEEE--CTTS-HHHHHHTCEEEEEECTTSC-EEECEEEEEECTTSBEEEEEEECTT
T ss_pred -CHHHHHHHHHHHHHHhcCCCCcceeEE--Cchh-HHHHHhCCCCcccccCCCC-CcccceEEEECCCCEEEEEEecCCC
Confidence 5667777763 15789999984 4433 3455665543211000010 23479999999999999987643
Q ss_pred --CChhhHHHHHHhhh
Q 027311 211 --TSPLSIEVVLECLC 224 (225)
Q Consensus 211 --~~~~~l~~~l~~ll 224 (225)
.+.+++.+.|++|.
T Consensus 150 ~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 150 TGRNAHEILRVLKSLQ 165 (220)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 25677888887763
No 91
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=2.6e-25 Score=174.52 Aligned_cols=144 Identities=13% Similarity=0.081 Sum_probs=112.3
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccC-CCCCh-----HhHHHHHHHHHHHhcCCeEEEEEecCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQ-CGLTN-----SNYTELSQLYDKYKNQGLEILAFPCNQFG 134 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~tw-C~~C~-----~~~~~l~~l~~~~~~~~~~iv~Is~d~~~ 134 (225)
..+.+|+++|+|++.+.+|+.++|++++||++||+||++| ||+|. .+++.++++ + +|++|++||.|
T Consensus 20 ~~l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D--- 91 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD--- 91 (224)
T ss_dssp CCCCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS---
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC---
Confidence 3458999999999999999999999999999999999887 99999 999998887 4 67999999988
Q ss_pred CCCCCCHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC----
Q 027311 135 AQEPGDNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP---- 209 (225)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g---- 209 (225)
+.+.+++|+ +++++ +||+++ |.......+.|+...... ... + ...|++||||++|+|++++..
T Consensus 92 -----s~~~~~~f~-~~~gl~~fplLs--D~~~~~vak~yGv~~~~~-~~~--G-~~~p~tfvID~dG~I~~~~~~~~~~ 159 (224)
T 3keb_A 92 -----SPSSLARAR-HEHGLPNIALLS--TLRGRDFHKRYGVLITEY-PLS--G-YTSPAIILADAANVVHYSERLANTR 159 (224)
T ss_dssp -----CHHHHHHHH-HHHCCTTCEEEE--STTCTTHHHHTTCBCCST-TST--T-CBCCEEEEECTTCBEEEEEECSBTT
T ss_pred -----CHHHHHHHH-HHcCCCCceEEE--cCCchHHHHHhCCccccc-ccc--C-CccCEEEEEcCCCEEEEEEecCCCC
Confidence 788999998 77888 699994 543344555665432210 001 2 237999999999999998653
Q ss_pred -CCChhhHHHHHHhhh
Q 027311 210 -TTSPLSIEVVLECLC 224 (225)
Q Consensus 210 -~~~~~~l~~~l~~ll 224 (225)
..+.+++.+.|+.+.
T Consensus 160 ~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 160 DFFDFDAIEKLLQEGE 175 (224)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh
Confidence 344667777777653
No 92
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.2e-25 Score=173.79 Aligned_cols=146 Identities=16% Similarity=0.235 Sum_probs=115.1
Q ss_pred cccccCCCceecCeEEe---CCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCC
Q 027311 59 HTMASQSKTSVHDFSVK---DAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFG 134 (225)
Q Consensus 59 ~~~~~~~g~~~p~f~l~---~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~ 134 (225)
..+.+++|+++|+|+++ |.+|++++|++|+||++||+|| +.|||.|..|++.+++.+++|++.|++|++||+|
T Consensus 19 ~~M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D--- 95 (216)
T 3sbc_A 19 SHMVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD--- 95 (216)
T ss_dssp ---CCCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS---
T ss_pred CcchhhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC---
Confidence 33556899999999976 6677899999999999999999 9999999999999999999999999999999998
Q ss_pred CCCCCCHHHHHHHHHhhc-------CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEc
Q 027311 135 AQEPGDNEQIQEFACTRF-------KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY 207 (225)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~ 207 (225)
+....++|. +.. +++||++. |.++ ...+.|+.+.... ++ ..+.+||||++|+|++..
T Consensus 96 -----s~~sh~aw~-~~~~~~~~~~~l~fplls--D~~~-~vak~YGv~~~~~------g~-~~R~tFiID~~G~Ir~~~ 159 (216)
T 3sbc_A 96 -----SEYSLLAWT-NIPRKEGGLGPINIPLLA--DTNH-SLSRDYGVLIEEE------GV-ALRGLFIIDPKGVIRHIT 159 (216)
T ss_dssp -----CHHHHHHHH-TSCGGGTCCCSCSSCEEE--CTTS-HHHHHHTCEETTT------TE-ECEEEEEECTTSBEEEEE
T ss_pred -----chhhHHHHH-HHHHHhCCccCcccceEe--CCCC-HHHHHcCCeeccC------Cc-eeeEEEEECCCCeEEEEE
Confidence 888888887 332 47899984 5443 4566787664432 22 357899999999999875
Q ss_pred CCCC----ChhhHHHHHHhh
Q 027311 208 APTT----SPLSIEVVLECL 223 (225)
Q Consensus 208 ~g~~----~~~~l~~~l~~l 223 (225)
.... +.+++.+.|++|
T Consensus 160 v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 160 INDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp EECTTBCCCHHHHHHHHHHH
T ss_pred EcCCCCCCCHHHHHHHHHHh
Confidence 4322 446666666665
No 93
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=1.5e-25 Score=179.00 Aligned_cols=134 Identities=19% Similarity=0.249 Sum_probs=107.8
Q ss_pred cCCCceecCeEEeCC-CCC--eecCCc-cCCCEEEEEEc-ccCCCCCh-HhHHHHHHHHHHHhcCCe-EEEEEecCCCCC
Q 027311 63 SQSKTSVHDFSVKDA-KGQ--DVDLSI-YKGKLLLIVNV-ASQCGLTN-SNYTELSQLYDKYKNQGL-EILAFPCNQFGA 135 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~-~G~--~~~l~~-~~gk~vlv~F~-~twC~~C~-~~~~~l~~l~~~~~~~~~-~iv~Is~d~~~~ 135 (225)
+.+|+++|+|++.+. +|+ .++|++ ++||++||+|| ++|||+|+ .++|.|++++++|+++|+ +|++||.|
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d---- 78 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN---- 78 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS----
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC----
Confidence 478999999999997 777 999999 89999999999 99999999 999999999999999999 99999988
Q ss_pred CCCCCHHHHHHHHHhhcCCC-cceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC
Q 027311 136 QEPGDNEQIQEFACTRFKAE-FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT 211 (225)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~ 211 (225)
+.+.+++|+ ++++.. ||++. |.++. ..+.|+...... ..|.+....|++||| ++|+|++.+.|..
T Consensus 79 ----~~~~~~~~~-~~~~~~~~~~l~--D~~~~-~~~~~gv~~~~~--~~g~~~~~~p~t~li-~~G~i~~~~~~~~ 144 (241)
T 1nm3_A 79 ----DTFVMNAWK-EDEKSENISFIP--DGNGE-FTEGMGMLVGKE--DLGFGKRSWRYSMLV-KNGVVEKMFIEPN 144 (241)
T ss_dssp ----CHHHHHHHH-HHTTCTTSEEEE--CTTSH-HHHHTTCEEECT--TTTCCEEECCEEEEE-ETTEEEEEEECCS
T ss_pred ----CHHHHHHHH-HhcCCCceEEEE--CCCcH-HHHHhCceeecc--cccCcccceeEEEEE-ECCEEEEEEEecc
Confidence 678889998 777886 99984 54433 444554322110 011122357999999 9999999988754
No 94
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.92 E-value=2.1e-25 Score=178.37 Aligned_cols=144 Identities=15% Similarity=0.245 Sum_probs=114.0
Q ss_pred cCCCceecCeEEeCCCCCeecC-Ccc--CCCEE-EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCC
Q 027311 63 SQSKTSVHDFSVKDAKGQDVDL-SIY--KGKLL-LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEP 138 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~~G~~~~l-~~~--~gk~v-lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~ 138 (225)
+.+|+++|+|++.+.+| .+++ +++ +||++ |++||++||++|..+++.|++++++|+++|++|++||+|
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D------- 76 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD------- 76 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS-------
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC-------
Confidence 47899999999999999 7999 999 99975 557899999999999999999999999999999999998
Q ss_pred CCHHHHHHHHHh-----hcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC--
Q 027311 139 GDNEQIQEFACT-----RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-- 211 (225)
Q Consensus 139 ~~~~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~-- 211 (225)
+.....+|... ..+++||++. |.+ ....+.|+...... ++.++|++||||++|+|+++..+..
T Consensus 77 -s~~~~~~w~~~~~~~~~~~i~fPil~--D~~-~~ia~~ygv~~~~~------g~~~~p~~fIID~dG~I~~~~~~~~~~ 146 (249)
T 3a2v_A 77 -SVFSHIKWKEWIERHIGVRIPFPIIA--DPQ-GTVARRLGLLHAES------ATHTVRGVFIVDARGVIRTMLYYPMEL 146 (249)
T ss_dssp -CHHHHHHHHHHHHHHTCCCCCSCEEE--CTT-SHHHHHHTCCCTTC------SSSCCEEEEEECTTSBEEEEEEECTTB
T ss_pred -CHHHHHHHHHHHHHhcCCCCceeEEE--CCc-hHHHHHhCCccccC------CCcccceEEEECCCCeEEEEEecCCcc
Confidence 66666666522 2578999884 433 33455664432211 3347899999999999999977654
Q ss_pred --ChhhHHHHHHhhh
Q 027311 212 --SPLSIEVVLECLC 224 (225)
Q Consensus 212 --~~~~l~~~l~~ll 224 (225)
+.+++.+.|+++.
T Consensus 147 gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 147 GRLVDEILRIVKALK 161 (249)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHH
Confidence 4678888888764
No 95
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=1.6e-25 Score=169.95 Aligned_cols=145 Identities=16% Similarity=0.207 Sum_probs=108.8
Q ss_pred cCCCceecCeEEeCC----CC-----CeecCCcc-CCC-EEEEEEcccCCCCChHh-HHHHHHHHHHHhcCCeE-EEEEe
Q 027311 63 SQSKTSVHDFSVKDA----KG-----QDVDLSIY-KGK-LLLIVNVASQCGLTNSN-YTELSQLYDKYKNQGLE-ILAFP 129 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~----~G-----~~~~l~~~-~gk-~vlv~F~~twC~~C~~~-~~~l~~l~~~~~~~~~~-iv~Is 129 (225)
..+|+++|+|++.+. +| +.++|+++ +|| ++|++||++|||+|+.| +|.|++++++|+++|++ |++||
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 457789999999998 57 89999996 997 67778999999999999 99999999999999999 99999
Q ss_pred cCCCCCCCCCCHHHHHHHHHhhcCC--CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEc
Q 027311 130 CNQFGAQEPGDNEQIQEFACTRFKA--EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY 207 (225)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~ 207 (225)
.| +.+.+++|+ +++++ +||++ .|.++. ..+.|+...... ..+.++...|++++|| +|+|++.+
T Consensus 87 ~d--------~~~~~~~~~-~~~~~~~~fp~l--~D~~~~-~~~~ygv~~~~~--~~~~g~~~~~~t~~I~-~G~I~~~~ 151 (171)
T 2pwj_A 87 IN--------DPYTVNAWA-EKIQAKDAIEFY--GDFDGS-FHKSLELTTDLS--AGLLGIRSERWSAYVV-DGKVKALN 151 (171)
T ss_dssp SS--------CHHHHHHHH-HHTTCTTTSEEE--ECTTCH-HHHHHTCEEECT--TTTCCEEECCEEEEEE-TTEEEEEE
T ss_pred CC--------CHHHHHHHH-HHhCCCCceEEE--ECCccH-HHHHhCCccccc--cccCCcccceeEEEEE-CCEEEEEE
Confidence 88 678889998 77785 79988 454433 445565432111 0111344568899999 99999998
Q ss_pred CCCCC----hhhHHHHHHh
Q 027311 208 APTTS----PLSIEVVLEC 222 (225)
Q Consensus 208 ~g~~~----~~~l~~~l~~ 222 (225)
.+... ..+.++.|+.
T Consensus 152 ~~~~~~~~~~~~~~~il~~ 170 (171)
T 2pwj_A 152 VEESPSDVKVSGAETILGQ 170 (171)
T ss_dssp ECSSTTCCSSSSHHHHHHH
T ss_pred eecCCCCCcccCHHHHHhc
Confidence 77543 2355555554
No 96
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.92 E-value=1.8e-24 Score=168.94 Aligned_cols=144 Identities=17% Similarity=0.236 Sum_probs=114.4
Q ss_pred ccCCCceecCeE----EeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCC
Q 027311 62 ASQSKTSVHDFS----VKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQ 136 (225)
Q Consensus 62 ~~~~g~~~p~f~----l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~ 136 (225)
.+++|+++|+|+ +.|.+|++++|++|+||++||+|| +.|||.|..|+..+++.+++|++.|++|++||+|
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~D----- 99 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSID----- 99 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESS-----
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCC-----
Confidence 358999999998 447788999999999999999999 8899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhh------cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC
Q 027311 137 EPGDNEQIQEFACTR------FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~ 210 (225)
+....++|..+. .+++||+++ |.++ ...+.|+.+.... ++ ....+||||++|+|++.+...
T Consensus 100 ---s~~sh~~w~~~~~~~~~~~~l~fplls--D~~~-~va~~yGv~~~~~------g~-~~R~tFiIDp~g~Ir~~~~~~ 166 (219)
T 3tue_A 100 ---SEYAHLQWTLQDRKKGGLGTMAIPILA--DKTK-NIARSYGVLEESQ------GV-AYRGLFIIDPHGMLRQITVND 166 (219)
T ss_dssp ---CHHHHHHHHHSCGGGTCCCSCSSCEEE--CTTS-HHHHHTTCEETTT------TE-ECEEEEEECTTSBEEEEEEEC
T ss_pred ---chhhHHHHhhhhHHhcCcccccccccc--Cccc-HHHHHcCCcccCC------Ce-eEEEEEEECCCCeEEEEEEec
Confidence 888889997322 257899984 5444 4666787765432 21 235789999999999876322
Q ss_pred C----ChhhHHHHHHhh
Q 027311 211 T----SPLSIEVVLECL 223 (225)
Q Consensus 211 ~----~~~~l~~~l~~l 223 (225)
. +.+++.+.|++|
T Consensus 167 ~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 167 MPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp TTCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 2 345666666665
No 97
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.92 E-value=2.1e-25 Score=164.06 Aligned_cols=122 Identities=16% Similarity=0.224 Sum_probs=98.9
Q ss_pred CCCceecC-eEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc-CCeEEEEEecCCCCCCCCCCH
Q 027311 64 QSKTSVHD-FSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 64 ~~g~~~p~-f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~-~~~~iv~Is~d~~~~~~~~~~ 141 (225)
..|+.+|+ |++++.+|+.+++++++||++||+||++||++|+.++|.|+++++++++ .++++++|++|. +.
T Consensus 2 ~~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~-------~~ 74 (144)
T 1i5g_A 2 GLKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE-------SA 74 (144)
T ss_dssp TTTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------SH
T ss_pred chhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------CH
Confidence 36788999 9999999999999999999999999999999999999999999999985 579999999985 78
Q ss_pred HHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEEC-CCCcEEEEcC
Q 027311 142 EQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVD-KEGNVVERYA 208 (225)
Q Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid-~~G~I~~~~~ 208 (225)
+.+++|+ ++++. .+|+.. .|. .....+.| ++.++|+++||| ++|+|++++.
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~d~-~~~~~~~~-------------~v~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 75 EDFKDYY-AKMPWLALPFED-RKG-MEFLTTGF-------------DVKSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHHHHH-TTCSSEECCTTC-HHH-HHHHHHHT-------------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HhCCccccccCc-hHH-HHHHHHHc-------------CCCCCCEEEEEECCCCcEEeccc
Confidence 8899998 55442 344331 010 11122222 788999999999 9999998754
No 98
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.85 E-value=1.8e-26 Score=169.23 Aligned_cols=122 Identities=12% Similarity=0.195 Sum_probs=100.8
Q ss_pred ceecCeEEeCCCCCeecCCc-cCCC-EEEEEEcccCCCCChHhHHHHHHHHHHHhc--CCeEEEEEecCCCCCCCCCCHH
Q 027311 67 TSVHDFSVKDAKGQDVDLSI-YKGK-LLLIVNVASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 67 ~~~p~f~l~~~~G~~~~l~~-~~gk-~vlv~F~~twC~~C~~~~~~l~~l~~~~~~--~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
+.+|+|++++.+|+.+++++ ++|| ++||+||++||++|+.++|.|+++++++++ .++.+++|++|+ +.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~-------~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDR-------SED 74 (143)
Confidence 45799999999999999999 9999 999999999999999999999999999953 469999999985 667
Q ss_pred HHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC
Q 027311 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (225)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g 209 (225)
.+++|+ ++++.+|+.+...........+.| ++.++|+++|||++|+|+++..+
T Consensus 75 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------~v~~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 75 DMFQYM-MESHGDWLAIPYRSGPASNVTAKY-------------GITGIPALVIVKKDGTLISMNGR 127 (143)
Confidence 888888 788888876532222222333333 78889999999999999988544
No 99
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.91 E-value=9.6e-26 Score=170.17 Aligned_cols=123 Identities=15% Similarity=0.258 Sum_probs=99.4
Q ss_pred cCCCceecCe-EEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc-CCeEEEEEecCCCCCCCCCC
Q 027311 63 SQSKTSVHDF-SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGD 140 (225)
Q Consensus 63 ~~~g~~~p~f-~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~-~~~~iv~Is~d~~~~~~~~~ 140 (225)
..+|+++|+| ++.+.+| .+++++++||++||+||++||++|+.++|.|++++++|++ .+++|++|++|. +
T Consensus 22 ~~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~-------~ 93 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDE-------E 93 (165)
T ss_dssp CHHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-------S
T ss_pred hhhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCC-------C
Confidence 3689999999 9999999 9999999999999999999999999999999999999986 579999999985 7
Q ss_pred HHHHHHHHHhhcC-CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCC-CcEEEEcCC
Q 027311 141 NEQIQEFACTRFK-AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-GNVVERYAP 209 (225)
Q Consensus 141 ~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~-G~I~~~~~g 209 (225)
.+++++|+ ++++ ..+++.. +.......+.| ++.++|++||||++ |+|+++..+
T Consensus 94 ~~~~~~~~-~~~~~~~~~~~~--~~~~~~l~~~~-------------~v~~~Pt~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 94 EDDFNAYY-AKMPWLSIPFAN--RNIVEALTKKY-------------SVESIPTLIGLNADTGDTVTTRAR 148 (165)
T ss_dssp HHHHHHHH-TTCSSEECCTTC--HHHHHHHHHHT-------------TCCSSSEEEEEETTTCCEEESCHH
T ss_pred HHHHHHHH-HhCCCcccccCc--hhHHHHHHHHc-------------CCCCCCEEEEEeCCCCEEEecccH
Confidence 78899998 4443 2233321 10001222223 88899999999998 999987543
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.91 E-value=7.6e-25 Score=161.51 Aligned_cols=122 Identities=16% Similarity=0.304 Sum_probs=98.6
Q ss_pred CCCceecC-eEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc-CCeEEEEEecCCCCCCCCCCH
Q 027311 64 QSKTSVHD-FSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 64 ~~g~~~p~-f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~-~~~~iv~Is~d~~~~~~~~~~ 141 (225)
..|+.+|+ |++++.+| .+++++++||++||+||++||++|+.++|.|+++++++++ +++++++|++|. +.
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~-------~~ 74 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDE-------EE 74 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-------SH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC-------CH
Confidence 46788999 99999999 9999999999999999999999999999999999999984 679999999985 78
Q ss_pred HHHHHHHHhhcC-CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEEC-CCCcEEEEcCC
Q 027311 142 EQIQEFACTRFK-AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVD-KEGNVVERYAP 209 (225)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid-~~G~I~~~~~g 209 (225)
+++++|+ ++++ ..+++.. .|. .....+.| ++.++|+++|+| ++|+|+++..+
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~d~-~~~~~~~~-------------~v~~~Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 75 DGFAGYF-AKMPWLAVPFAQ-SEA-VQKLSKHF-------------NVESIPTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp HHHHHHH-TTCSSEECCGGG-HHH-HHHHHHHT-------------TCCSSSEEEEEETTTCCEEESCHH
T ss_pred HHHHHHH-HHCCceeeccch-hhH-HHHHHHHh-------------CCCCCCEEEEEECCCCeEEEecch
Confidence 8899998 5544 2444431 011 11122222 788899999999 99999987543
No 101
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.90 E-value=1.3e-24 Score=159.65 Aligned_cols=121 Identities=12% Similarity=0.245 Sum_probs=97.1
Q ss_pred CCCceecCe-EEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHh-cCCeEEEEEecCCCCCCCCCCH
Q 027311 64 QSKTSVHDF-SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYK-NQGLEILAFPCNQFGAQEPGDN 141 (225)
Q Consensus 64 ~~g~~~p~f-~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~-~~~~~iv~Is~d~~~~~~~~~~ 141 (225)
..|+.+|+| ++++.+| .+++++++||++||+||++||++|+.++|.|++++++++ +.++.+++|++|. +.
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~-------~~ 74 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDE-------NE 74 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------SH
T ss_pred chhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------CH
Confidence 578899997 9999999 999999999999999999999999999999999999998 4579999999985 67
Q ss_pred HHHHHHHHhhcC-CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEEC-CCCcEEEEcC
Q 027311 142 EQIQEFACTRFK-AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVD-KEGNVVERYA 208 (225)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid-~~G~I~~~~~ 208 (225)
+++++++ ++++ ..+++.. .|. .....+.| ++.++|+++|+| ++|+|+++..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~-------------~v~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 75 SDFHDYY-GKMPWLALPFDQ-RST-VSELGKTF-------------GVESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHHHH-TTCSSEECCTTC-HHH-HHHHHHHH-------------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHH-HhCCceEeeccc-hhH-HHHHHHHc-------------CCCCCCEEEEEECCCCeEEecch
Confidence 8888888 4443 2333320 010 11122233 788899999999 8999998764
No 102
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.90 E-value=2e-23 Score=173.23 Aligned_cols=132 Identities=16% Similarity=0.237 Sum_probs=104.5
Q ss_pred ceecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHH
Q 027311 67 TSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQ 145 (225)
Q Consensus 67 ~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~ 145 (225)
.++|+|++.|.+|++++|+|++||+|||+|| +.|||.|..|++.+++ ...++++|++||.| +.+.++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~ 69 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALK 69 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHH
Confidence 3689999999999999999999999999999 6799999999988864 23457999999988 789999
Q ss_pred HHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCCh---hhHHHHHHh
Q 027311 146 EFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP---LSIEVVLEC 222 (225)
Q Consensus 146 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~---~~l~~~l~~ 222 (225)
+|. ++++++||+++ |.++ ...+.|+.+.. -..+|++||||++|+|++.+.+.... +++.+.|++
T Consensus 70 ~f~-~~~~l~fp~l~--D~~~-~v~~~ygv~~~---------~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~ 136 (322)
T 4eo3_A 70 RFK-EKNDLKVTLLS--DPEG-ILHEFFNVLEN---------GKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDR 136 (322)
T ss_dssp HHH-HHHTCCSEEEE--CTTC-HHHHHTTCEET---------TEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHH
T ss_pred HHH-HhhCCceEEEE--cCch-HHHHhcCCCCC---------CcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhh
Confidence 998 88899999994 5444 35556643311 13468999999999999988776544 455555555
Q ss_pred h
Q 027311 223 L 223 (225)
Q Consensus 223 l 223 (225)
+
T Consensus 137 ~ 137 (322)
T 4eo3_A 137 L 137 (322)
T ss_dssp H
T ss_pred h
Confidence 4
No 103
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.87 E-value=3.7e-22 Score=151.03 Aligned_cols=147 Identities=12% Similarity=0.079 Sum_probs=112.3
Q ss_pred ccCCCceecCeEEeCCCC----------CeecCCcc-CCCEE-EEEEcccCCCCChH-hHHHHHHHHHHHhcCCe-EEEE
Q 027311 62 ASQSKTSVHDFSVKDAKG----------QDVDLSIY-KGKLL-LIVNVASQCGLTNS-NYTELSQLYDKYKNQGL-EILA 127 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G----------~~~~l~~~-~gk~v-lv~F~~twC~~C~~-~~~~l~~l~~~~~~~~~-~iv~ 127 (225)
..++|+++|+.++....+ ++++|+++ +||++ |++||++|||+|.. |++.+++.+++|+++|+ +|++
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vig 88 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWC 88 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 358999999988877644 67899997 99965 55677999999999 99999999999999999 9999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHhhcCCC--cceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEE
Q 027311 128 FPCNQFGAQEPGDNEQIQEFACTRFKAE--FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVE 205 (225)
Q Consensus 128 Is~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~ 205 (225)
||+| +....++|. ++++++ ||+++ |.+ ....+.|+...... ..|-++...+.+||| ++|+|++
T Consensus 89 IS~D--------~~~~~~~f~-~~~~l~~~f~lLs--D~~-~~va~ayGv~~~~~--~~G~g~~s~R~tfII-~dG~I~~ 153 (176)
T 4f82_A 89 VSVN--------DAFVMGAWG-RDLHTAGKVRMMA--DGS-AAFTHALGLTQDLS--ARGMGIRSLRYAMVI-DGGVVKT 153 (176)
T ss_dssp EESS--------CHHHHHHHH-HHTTCTTTSEEEE--CTT-CHHHHHHTCEEECG--GGTCCEEECCEEEEE-ETTEEEE
T ss_pred EeCC--------CHHHHHHHH-HHhCCCCCceEEE--cCc-hHHHHHhCCCcccc--ccCCCcccccEEEEE-cCCEEEE
Confidence 9998 788999998 777888 99994 544 34556676543321 111134556899999 9999999
Q ss_pred EcCCCC---ChhhHHHHHHhh
Q 027311 206 RYAPTT---SPLSIEVVLECL 223 (225)
Q Consensus 206 ~~~g~~---~~~~l~~~l~~l 223 (225)
.+.+.. +....++.|++|
T Consensus 154 ~~~~~~~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 154 LAVEAPGKFEVSDAASVLATL 174 (176)
T ss_dssp EEECCTTCCSSSSHHHHHHTC
T ss_pred EEEcCCCCcchhhHHHHHHHh
Confidence 987542 223566666554
No 104
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.84 E-value=2.2e-20 Score=140.94 Aligned_cols=135 Identities=14% Similarity=0.209 Sum_probs=105.6
Q ss_pred cccCCCceecCeEEeCCCC-CeecCCc-cCCCEEEEEEc-ccCCCCChHhHHHHHHHHHHHhcCCeE-EEEEecCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKG-QDVDLSI-YKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLE-ILAFPCNQFGAQ 136 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G-~~~~l~~-~~gk~vlv~F~-~twC~~C~~~~~~l~~l~~~~~~~~~~-iv~Is~d~~~~~ 136 (225)
...++|+++|+|++.+..+ ++++|++ ++||++||+|+ +.|||.|..|++.+++.+++++++|++ |++||+|
T Consensus 12 ~~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D----- 86 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN----- 86 (171)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS-----
T ss_pred CcccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC-----
Confidence 3458999999999994432 8999999 59999998888 789999999999999999999999996 9999998
Q ss_pred CCCCHHHHHHHHHhhcCC--CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC
Q 027311 137 EPGDNEQIQEFACTRFKA--EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~ 210 (225)
+....++|. ++.++ +|++++ |.+ ....+.|+....... .|.+......+|||| +|+|++.+...
T Consensus 87 ---~~~~~~~w~-~~~~~~~~f~lLS--D~~-~~~a~ayGv~~~~~~--~g~g~~~~R~tfvId-dG~V~~~~v~~ 152 (171)
T 2xhf_A 87 ---DPFVMAAWG-KTVDPEHKIRMLA--DMH-GEFTRALGTELDSSK--MLGNNRSRRYAMLID-DNKIRSVSTEP 152 (171)
T ss_dssp ---CHHHHHHHH-HHHCTTCCSEEEE--CTT-SHHHHHHTCBCCCHH--HHSSCCBCCEEEEEE-TTEEEEEEETT
T ss_pred ---CHHHHHHHH-HhcCCCCCeEEEE--eCC-chHHHHhCCceeccc--cCCCcceEEEEEEEe-CCEEEEEEEeC
Confidence 889999998 66677 899995 443 445666765532210 010223345789999 99999998754
No 105
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.83 E-value=1.6e-20 Score=143.34 Aligned_cols=131 Identities=12% Similarity=0.165 Sum_probs=102.4
Q ss_pred CCCceecCeEEeC--C---------CC----CeecCCc-cCCCEEEEEEc-ccCCCCCh-HhHHHHHHHHHHH-hcCCeE
Q 027311 64 QSKTSVHDFSVKD--A---------KG----QDVDLSI-YKGKLLLIVNV-ASQCGLTN-SNYTELSQLYDKY-KNQGLE 124 (225)
Q Consensus 64 ~~g~~~p~f~l~~--~---------~G----~~~~l~~-~~gk~vlv~F~-~twC~~C~-~~~~~l~~l~~~~-~~~~~~ 124 (225)
++|+.+|+|++.+ . +| +.++|++ ++||++||+|+ +.|||.|. .|++.+++.++++ +++|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5899999999998 4 67 7999999 69999888777 88999999 9999999999999 999995
Q ss_pred -EEEEecCCCCCCCCCCHHHHHHHHHhhcCC-CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCc
Q 027311 125 -ILAFPCNQFGAQEPGDNEQIQEFACTRFKA-EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGN 202 (225)
Q Consensus 125 -iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~ 202 (225)
|++||+| +...+++|. +++++ +|++++ |.+ ....+.|+...... ..|-+......+|||| +|+
T Consensus 82 ~V~gvS~D--------~~~~~~~~~-~~~~~~~f~lLs--D~~-~~~a~~yGv~~~~~--~~G~g~~~~R~tfvId-dG~ 146 (182)
T 1xiy_A 82 DIYCITNN--------DIYVLKSWF-KSMDIKKIKYIS--DGN-SSFTDSMNMLVDKS--NFFMGMRPWRFVAIVE-NNI 146 (182)
T ss_dssp EEEEEESS--------CHHHHHHHH-HHTTCCSSEEEE--CTT-SHHHHHTTCEEECG--GGTCCEEECCEEEEEE-TTE
T ss_pred EEEEEeCC--------CHHHHHHHH-HHcCCCCceEEE--eCc-hHHHHHhCCceecc--ccCCCCceEEEEEEEc-CCE
Confidence 9999998 888999998 67788 699995 444 34556676543221 0111333456889999 999
Q ss_pred EEEEcCC
Q 027311 203 VVERYAP 209 (225)
Q Consensus 203 I~~~~~g 209 (225)
|++.+..
T Consensus 147 V~~~~v~ 153 (182)
T 1xiy_A 147 LVKMFQE 153 (182)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9998754
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.78 E-value=3.9e-19 Score=127.53 Aligned_cols=110 Identities=17% Similarity=0.142 Sum_probs=89.6
Q ss_pred eecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEe--cCCCCCCCCCCHHHHH
Q 027311 68 SVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP--CNQFGAQEPGDNEQIQ 145 (225)
Q Consensus 68 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is--~d~~~~~~~~~~~~~~ 145 (225)
.+++++..+.+|........+||+++|.||++||++|+.+.|.+++++++++ .++.++.|+ +| ...++
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d--------~~~~~- 74 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEE--------KNIDL- 74 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSS--------HHHHH-
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCC--------chHHH-
Confidence 4566666677776666666789999999999999999999999999999997 459999999 54 11111
Q ss_pred HHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 146 EFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 146 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
. + .| ++.++|+++++|++|+++.++.|..+.+++.+.|++++
T Consensus 75 --~-~---------------------~~-------------~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 75 --A-Y---------------------KY-------------DANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp --H-H---------------------HT-------------TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred --H-H---------------------Hc-------------CCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 1 1 12 77789999999999999999999999999999998875
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.77 E-value=1.1e-19 Score=132.11 Aligned_cols=116 Identities=13% Similarity=0.083 Sum_probs=90.6
Q ss_pred CCCceecCeE-EeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 64 QSKTSVHDFS-VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 64 ~~g~~~p~f~-l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
..+..+|+|. +.+.++....+++.+||++||+||++||++|+.+.+.+ .++.++++ ++.++.|+++.
T Consensus 5 ~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~------- 75 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA------- 75 (134)
T ss_dssp -----CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT-------
T ss_pred cccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC-------
Confidence 5778899997 66677777788888899999999999999999999999 89999886 39999999863
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEE--EEcCCCCChhhHH
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV--ERYAPTTSPLSIE 217 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~--~~~~g~~~~~~l~ 217 (225)
..+...+.+ ++ | ++.++|+++++|++|+++ .++.|..+.++++
T Consensus 76 ~~~~~~~l~-~~---------------------~-------------~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~ 120 (134)
T 2fwh_A 76 NDAQDVALL-KH---------------------L-------------NVLGLPTILFFDGQGQEHPQARVTGFMDAETFS 120 (134)
T ss_dssp CCHHHHHHH-HH---------------------T-------------TCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHH
T ss_pred CcchHHHHH-HH---------------------c-------------CCCCCCEEEEECCCCCEeeeeeeeeccCHHHHH
Confidence 212222222 11 2 777899999999999998 7899999999999
Q ss_pred HHHHhh
Q 027311 218 VVLECL 223 (225)
Q Consensus 218 ~~l~~l 223 (225)
+.|+++
T Consensus 121 ~~l~~~ 126 (134)
T 2fwh_A 121 AHLRDR 126 (134)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 998865
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.77 E-value=3.2e-18 Score=125.07 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=89.1
Q ss_pred EEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhc
Q 027311 73 SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (225)
Q Consensus 73 ~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~ 152 (225)
.+.+.+|....+++++||++||.||++||++|+...|.+.++.++++++ +.++.|++|. .. ++ + ++
T Consensus 35 ~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~~---~-~~- 100 (141)
T 3hxs_A 35 KIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDK-------EP-EL---A-RD- 100 (141)
T ss_dssp HTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-HH---H-HH-
T ss_pred HhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCC-------CH-HH---H-HH-
Confidence 4567788999999999999999999999999999999999999999865 9999999873 22 11 1 11
Q ss_pred CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
| ++.++|+++++|++|+++ ++.|..+.+++.+.|+++++
T Consensus 101 --------------------~-------------~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 101 --------------------F-------------GIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp --------------------T-------------TCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC
T ss_pred --------------------c-------------CCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHc
Confidence 2 777899999999999997 78898899999999999874
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.74 E-value=2.2e-18 Score=128.24 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=89.8
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEc-ccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
..+...++| +..|+.+++++.+||+++|+|| ++||++|+.+.|.+ .++.+.+.. ++.++.|+.+..
T Consensus 25 ~~~~~~~~~---~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~------ 94 (154)
T 2ju5_A 25 PIAAANLQW---ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQK------ 94 (154)
T ss_dssp SSCCCCCCE---ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSS------
T ss_pred hcccCCCCC---CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccc------
Confidence 445555666 4457888888889999999999 99999999999999 777666543 489999987741
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC--ChhhHH
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SPLSIE 217 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~--~~~~l~ 217 (225)
. +++++.. +.. ....+.| ++.++|+++|+|++|+++.+. |.. +.+++.
T Consensus 95 -~-----------~~~~~~~---~~~-~~l~~~~-------------~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~ 144 (154)
T 2ju5_A 95 -N-----------HQPEEQR---QKN-QELKAQY-------------KVTGFPELVFIDAEGKQLARM-GFEPGGGAAYV 144 (154)
T ss_dssp -C-----------CCCHHHH---HHH-HHHHHHT-------------TCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHH
T ss_pred -c-----------CCChhhH---hhH-HHHHHHc-------------CCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHH
Confidence 1 1111111 110 1112222 788899999999999999999 988 788999
Q ss_pred HHHHhhhC
Q 027311 218 VVLECLCC 225 (225)
Q Consensus 218 ~~l~~ll~ 225 (225)
+.|+++++
T Consensus 145 ~~l~~~l~ 152 (154)
T 2ju5_A 145 SKVKSALK 152 (154)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998874
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.74 E-value=8.4e-18 Score=121.02 Aligned_cols=108 Identities=16% Similarity=0.203 Sum_probs=84.9
Q ss_pred CCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHH
Q 027311 65 SKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI 144 (225)
Q Consensus 65 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~ 144 (225)
...++|+++ +.+++.++....+||+++|.||++||++|+.+.|.+++++++++++ +.++.|++|. . .++
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-v~~~~vd~d~-------~-~~l 88 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR-IYLLKVDLDK-------N-ESL 88 (128)
T ss_dssp ------CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-EEEEEEEGGG-------C-HHH
T ss_pred HhccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------C-HHH
Confidence 345567666 5667778888889999999999999999999999999999999854 9999999873 2 111
Q ss_pred HHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 145 QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
. + .| ++.++|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 89 ---~-~---------------------~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 89 ---A-R---------------------KF-------------SVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp ---H-H---------------------HT-------------TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHTT
T ss_pred ---H-H---------------------Hc-------------CCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHHh
Confidence 1 1 12 77889999999 799999999999999999988865
No 111
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.70 E-value=1.5e-18 Score=131.19 Aligned_cols=122 Identities=10% Similarity=0.019 Sum_probs=76.3
Q ss_pred eecCCccCCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcc
Q 027311 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (225)
Q Consensus 81 ~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
.+.++..+||++||+||++||++|+.+.+.+ .++++.+++ ++.++.|++|+ .. ++.+...........
T Consensus 39 ~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~-------~~-~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 39 GMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN-------KT-PLTEPVKIMENGTER 109 (172)
T ss_dssp HHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC-------CC-EEEEEEEEEETTEEE
T ss_pred HHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc-------cc-ccchhhhhhhcchhh
Confidence 3445556799999999999999999864443 566666654 49999999874 11 000000000000000
Q ss_pred eeeee-cCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCC-hhhHHHHHHhhh
Q 027311 158 IFDKV-DVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS-PLSIEVVLECLC 224 (225)
Q Consensus 158 ~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~-~~~l~~~l~~ll 224 (225)
.+... +..+......| ++.++|+++|+|++|+++.++.|..+ .+++.+.|++++
T Consensus 110 ~~~~~~~~~~~~~~~~~-------------~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKF-------------GANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEHHHHHHHHHHHHH-------------SCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHc-------------CCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 00000 00000001223 88999999999999999999999988 888888888765
No 112
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.69 E-value=9.9e-17 Score=118.19 Aligned_cols=113 Identities=13% Similarity=0.156 Sum_probs=93.5
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHH
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~ 143 (225)
..|.++++..+.+.+++.+.....+||+++|.||++||++|+.+.|.++++.++++++ +.++.|+.|. . .+
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~-------~-~~ 100 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEA-------E-PA 100 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------C-HH
T ss_pred hcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcC-------C-HH
Confidence 4577788888888888877655567899999999999999999999999999999765 9999998873 2 21
Q ss_pred HHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 144 IQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
+. + .| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 101 l~----~---------------------~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 101 LS----T---------------------RF-------------RIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp HH----H---------------------HT-------------TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred HH----H---------------------HC-------------CCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHH
Confidence 11 1 12 77788998888 6999999999999999999999987
Q ss_pred h
Q 027311 224 C 224 (225)
Q Consensus 224 l 224 (225)
+
T Consensus 142 l 142 (148)
T 3p2a_A 142 L 142 (148)
T ss_dssp H
T ss_pred h
Confidence 6
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.66 E-value=2e-16 Score=114.29 Aligned_cols=94 Identities=16% Similarity=0.115 Sum_probs=75.1
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHH--HHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELS--QLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~--~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
.+||++||+||++||++|+.+.|.+. ++.++++++ +.++.|++++. +...++ + ++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~-~~~~~vd~~~~-----~~~~~l---~-~~------------- 83 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH-FEVVKIDVGNF-----DRNLEL---S-QA------------- 83 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH-CEEEEEECTTT-----TSSHHH---H-HH-------------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC-EEEEEEeCCcc-----cchHHH---H-HH-------------
Confidence 46999999999999999999999999 999999754 99999998420 011211 1 22
Q ss_pred CCCCchhhhhhccccCCCCCCCcc---ccceeEEEECCCCcEEEEcCC-------CCChhhHHHHHHhhh
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSI---KWNFSKFLVDKEGNVVERYAP-------TTSPLSIEVVLECLC 224 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v---~~~P~~~lid~~G~I~~~~~g-------~~~~~~l~~~l~~ll 224 (225)
| ++ .++|+++++|++|+++.+..| ..+.+++.+.|+++.
T Consensus 84 --------~-------------~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 84 --------Y-------------GDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp --------T-------------TCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred --------h-------------CCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 2 55 678999999999999999988 567888999998875
No 114
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.65 E-value=3.2e-16 Score=109.05 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=70.2
Q ss_pred CccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 85 SIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 85 ~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
++.++|++||+|||+||++|+...|.+.++.+++++ +.++.|++|. . .++. ++
T Consensus 16 ~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~-------~-~~l~----~~------------- 68 (105)
T 3zzx_A 16 NEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDE-------C-EDIA----QD------------- 68 (105)
T ss_dssp HHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTT-------C-HHHH----HH-------------
T ss_pred HhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEeccc-------C-HHHH----HH-------------
Confidence 344689999999999999999999999999998864 8888898773 2 2221 11
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
| +|.++||++++ ++|+++.++.|. +++++.+.|++
T Consensus 69 --------~-------------~V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 69 --------N-------------QIACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp --------T-------------TCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred --------c-------------CCCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 2 78889997777 899999999994 67888888875
No 115
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.65 E-value=1.2e-15 Score=105.74 Aligned_cols=90 Identities=16% Similarity=0.199 Sum_probs=75.3
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.||+++|.||++||++|+...|.++++.++++++ +.++.|+.|. +. ++. +
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~-~~~----~----------------- 67 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDE-------SP-NVA----S----------------- 67 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-HHH----H-----------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCC-------CH-HHH----H-----------------
Confidence 4889999999999999999999999999999765 9999999873 22 111 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 68 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 68 ----EY-------------GIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp ----HH-------------TCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred ----HC-------------CCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 12 77778997777 899999999999999999999999875
No 116
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.64 E-value=3.7e-16 Score=109.67 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=75.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.+++++ ++.++.|++|. +.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------~~-------------------------- 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------NQ-------------------------- 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------CC--------------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------CH--------------------------
Confidence 789999999999999999999999999999986 49999999873 10
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
...+.| ++.++|+++++ ++|+++.++.|..+.+++.+.|++.+
T Consensus 62 ~l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~ 104 (112)
T 2voc_A 62 ETAGKY-------------GVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHL 104 (112)
T ss_dssp SHHHHT-------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTS
T ss_pred HHHHHc-------------CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 011122 77889999999 99999999999999999999998765
No 117
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.64 E-value=4.1e-16 Score=110.26 Aligned_cols=90 Identities=18% Similarity=0.236 Sum_probs=74.3
Q ss_pred CccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 85 SIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 85 ~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
++.+||+++|+||++||++|+...|.++++.+++++ +.++.|++|. . .++. +
T Consensus 27 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~-------~-~~l~----~-------------- 78 (116)
T 3qfa_C 27 DAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD-------C-QDVA----S-------------- 78 (116)
T ss_dssp HHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT-------T-HHHH----H--------------
T ss_pred HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------C-HHHH----H--------------
Confidence 334789999999999999999999999999999865 9999999873 1 2111 1
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|. +.+++++.|+++|
T Consensus 79 -------~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 79 -------EC-------------EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp -------HT-------------TCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred -------Hc-------------CCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 12 77788998888 899999999998 8999999998875
No 118
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.64 E-value=2.3e-16 Score=109.05 Aligned_cols=90 Identities=13% Similarity=0.142 Sum_probs=75.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.||+++|.||++||++|+...|.++++.++++++ +.++.|++|. +. ++ . +
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~-~~---~-~----------------- 65 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE-------NP-ET---T-S----------------- 65 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT-------CH-HH---H-H-----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC-------CH-HH---H-H-----------------
Confidence 5789999999999999999999999999999765 9999999873 21 11 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 66 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 105 (105)
T 1nsw_A 66 ----QF-------------GIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVLQ 105 (105)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTTC
T ss_pred ----Hc-------------CCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHhC
Confidence 12 77788999999 899999999999989999999988774
No 119
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.64 E-value=2.7e-16 Score=109.17 Aligned_cols=101 Identities=16% Similarity=0.215 Sum_probs=80.1
Q ss_pred CCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCc
Q 027311 77 AKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEF 156 (225)
Q Consensus 77 ~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (225)
++++.+...-.+|++++|.||++||++|+...|.++++.++++++ +.++.|+.|. .. ++. ++
T Consensus 9 l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~~~----~~----- 70 (109)
T 3tco_A 9 LTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVDE-------NQ-KIA----DK----- 70 (109)
T ss_dssp CCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CH-HHH----HH-----
T ss_pred ecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEcccc-------CH-HHH----Hh-----
Confidence 334444322235899999999999999999999999999999865 9999998773 22 211 11
Q ss_pred ceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 157 PIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 157 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 71 ----------------~-------------~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 71 ----------------Y-------------SVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp ----------------T-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred ----------------c-------------CcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 2 77788999999 999999999999999999999999874
No 120
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.64 E-value=9.3e-16 Score=106.50 Aligned_cols=102 Identities=20% Similarity=0.255 Sum_probs=80.2
Q ss_pred CCCCCeecCC-ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCC
Q 027311 76 DAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKA 154 (225)
Q Consensus 76 ~~~G~~~~l~-~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 154 (225)
.++++.+... .-+||+++|.||++||++|+...|.++++.++++++ +.++.|++|. +.+
T Consensus 6 ~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~------------ 65 (108)
T 2trx_A 6 HLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG------------ 65 (108)
T ss_dssp ECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CTT------------
T ss_pred ecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CHH------------
Confidence 3444444321 125889999999999999999999999999999765 9999998773 110
Q ss_pred CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 155 EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 155 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
..+.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 66 --------------~~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 66 --------------TAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp --------------HHHHT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred --------------HHHHc-------------CCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 11112 77889999999 899999999999999999999998874
No 121
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.64 E-value=9.5e-16 Score=107.21 Aligned_cols=92 Identities=17% Similarity=0.247 Sum_probs=73.3
Q ss_pred CccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 85 SIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 85 ~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
.+.+||+++|.||++||++|+...|.++++.+++++ +.++.|++|+ ...++.
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~-------~~~~~~------------------- 71 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------ENKTLA------------------- 71 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TTHHHH-------------------
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCc-------chHHHH-------------------
Confidence 334689999999999999999999999999999863 8999998762 111111
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
+.| ++.++|+ ++++++|+++.++.|.. .+++.+.|+++++
T Consensus 72 ------~~~-------------~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 72 ------KEL-------------GIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAARS 111 (111)
T ss_dssp ------HHH-------------CCSBSSE-EEEESSSSEEEEEESSC-HHHHHHHHHHHHC
T ss_pred ------HHc-------------CCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 112 7778899 67779999999998874 8889999998874
No 122
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.63 E-value=8.8e-16 Score=106.12 Aligned_cols=89 Identities=16% Similarity=0.229 Sum_probs=75.2
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
++++++|.||++||++|+...|.++++.++++++ +.++.|++|. +. ++. +
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~~~----~----------------- 67 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE-------NP-STA----A----------------- 67 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-HHH----H-----------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc-------CH-HHH----H-----------------
Confidence 7899999999999999999999999999999876 9999999873 22 111 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|++++++ +|+++.++.|..+.+++.+.|+++|
T Consensus 68 ----~~-------------~v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 68 ----KY-------------EVMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp ----HT-------------TCCSBSEEEEEE-TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred ----hC-------------CCcccCEEEEEe-CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 12 777789988884 9999999999999999999998865
No 123
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=5.1e-16 Score=111.57 Aligned_cols=99 Identities=14% Similarity=0.213 Sum_probs=76.7
Q ss_pred eecCCccCCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcc
Q 027311 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (225)
Q Consensus 81 ~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
.+.+++.+||++||.||++||++|+.+.+.+ .++.+.++.. +.++.|+.|. +...+ .+ +
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~------~~~~~---~~-~------- 80 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH-FVNLKMDMEK------GEGVE---LR-K------- 80 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH-SEEEEECSSS------TTHHH---HH-H-------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC-eEEEEEecCC------cchHH---HH-H-------
Confidence 4555556799999999999999999999999 6676666543 7788887652 01111 11 1
Q ss_pred eeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 158 IFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 158 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++|++|+++.++.|..+.+++.+.|++++
T Consensus 81 --------------~~-------------~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 81 --------------KY-------------GVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV 120 (130)
T ss_dssp --------------HT-------------TCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHH
T ss_pred --------------Hc-------------CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 12 77788999999999999999999999999999999876
No 124
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.63 E-value=1.2e-15 Score=110.89 Aligned_cols=89 Identities=17% Similarity=0.207 Sum_probs=74.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.||++||.||++||++|+...|.+.++.++++++ +.++.|++|. . .++ + +
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~-~~l---~-~----------------- 86 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEK-------E-QEL---A-G----------------- 86 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------C-HHH---H-H-----------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCC-------C-HHH---H-H-----------------
Confidence 4789999999999999999999999999999865 9999999873 2 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++|++|+++ ++.|..+.+++++.|++++
T Consensus 87 ----~~-------------~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 87 ----AF-------------GIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp ----HT-------------TCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHH
T ss_pred ----Hc-------------CCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHh
Confidence 12 777889999999999998 6788888999999999876
No 125
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.63 E-value=4.3e-16 Score=108.88 Aligned_cols=88 Identities=13% Similarity=0.240 Sum_probs=72.3
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
.+||+++|.||++||++|+.+.|.++++.+++++ +.++.|++|. . .++. ++
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~-------~-~~l~----~~--------------- 72 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDE-------L-GDVA----QK--------------- 72 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------C-HHHH----HH---------------
T ss_pred hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCC-------C-HHHH----HH---------------
Confidence 3589999999999999999999999999999864 8999998773 2 1111 11
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| ++.++|++++++ +|+++.++.|. +++++++.|++++
T Consensus 73 ------~-------------~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 73 ------N-------------EVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ------T-------------TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ------c-------------CCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 2 777889999997 99999999988 6789999998874
No 126
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.62 E-value=1.3e-16 Score=120.18 Aligned_cols=82 Identities=13% Similarity=0.052 Sum_probs=63.0
Q ss_pred cCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeee
Q 027311 83 DLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKV 162 (225)
Q Consensus 83 ~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (225)
.+++++||+++|+|||+|||+|+.++|.|++++++++ ++.++.|++|. ..+.+ +++.
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~-----------~~~~~-~~~~--------- 104 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGR-----------AEDDL-RQRL--------- 104 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHH-----------HHHHT-TTTT---------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCC-----------CHHHH-HHHH---------
Confidence 3566789999999999999999999999999999875 48999887652 11111 1110
Q ss_pred cCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC
Q 027311 163 DVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP 209 (225)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g 209 (225)
. .++.++|+++++|++|+++.++.+
T Consensus 105 ----~------------------~~v~~iPt~i~~~~~G~~~~~~g~ 129 (167)
T 1z6n_A 105 ----A------------------LERIAIPLVLVLDEEFNLLGRFVE 129 (167)
T ss_dssp ----T------------------CSSCCSSEEEEECTTCCEEEEEES
T ss_pred ----H------------------cCCCCcCeEEEECCCCCEEEEEcC
Confidence 0 057789999999999999988744
No 127
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.62 E-value=9.8e-16 Score=106.18 Aligned_cols=89 Identities=16% Similarity=0.233 Sum_probs=71.6
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|+||++||++|+...|.++++.++++ ++.++.|++|. .. ++
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~-~l----------------------- 63 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQ-EI----------------------- 63 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CH-HH-----------------------
Confidence 58999999999999999999999999999984 49999999873 11 11
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
...| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 64 --~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~e 105 (105)
T 4euy_A 64 --AGRY-------------AVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFEE 105 (105)
T ss_dssp ---------------------CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC-
T ss_pred --HHhc-------------CCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhhC
Confidence 1112 77889999999 599999999999999999999998864
No 128
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.62 E-value=1.7e-15 Score=105.96 Aligned_cols=90 Identities=18% Similarity=0.213 Sum_probs=74.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.++++++ +.++.|++|. +. ++ + +
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~-~~---~-~----------------- 71 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDE-------NP-GT---A-A----------------- 71 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-HH---H-H-----------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCC-------CH-HH---H-H-----------------
Confidence 4889999999999999999999999999999765 9999999873 21 11 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 72 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 72 ----KY-------------GVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred ----hC-------------CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 12 77788997766 899999999999999999999998874
No 129
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.62 E-value=1.9e-15 Score=107.14 Aligned_cols=90 Identities=16% Similarity=0.216 Sum_probs=75.6
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||++||.||++||++|+...+.++++.++++++ +.++.|++|. + .++ + +
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d~-------~-~~l---~-~----------------- 79 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDIDD-------H-TDL---A-I----------------- 79 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETTT-------T-HHH---H-H-----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCCC-------C-HHH---H-H-----------------
Confidence 5889999999999999999999999999999764 9999999873 1 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 80 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 80 ----EY-------------EVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ----Hc-------------CCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 12 77788999999 899999999998889999999998874
No 130
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.61 E-value=4.2e-16 Score=115.26 Aligned_cols=89 Identities=11% Similarity=0.074 Sum_probs=73.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||++||+||++||++|+.+.|.+.++.++++++ +.++.|++|. .. ++. +
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~-------~~-~l~----~----------------- 71 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ-------TA-VYT----Q----------------- 71 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT-------CC-HHH----H-----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc-------CH-HHH----H-----------------
Confidence 5899999999999999999999999999999766 9999998873 11 111 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEE---------EEcCC-CCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV---------ERYAP-TTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~---------~~~~g-~~~~~~l~~~l~~ll 224 (225)
.| +|.++|+++ ++++|+++ .+..| ..+.+++.+.|++++
T Consensus 72 ----~~-------------~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 72 ----YF-------------DISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp ----HT-------------TCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred ----Hc-------------CCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 12 778889988 77899999 78888 778889999888774
No 131
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.61 E-value=2.5e-16 Score=114.15 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=75.7
Q ss_pred EEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhc
Q 027311 73 SVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (225)
Q Consensus 73 ~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~ 152 (225)
++.+.++-.-.+++.+||++||.||++||++|+.+.|.++++.+++ ++.++.|++|. . .++. +
T Consensus 24 ~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~-------~-~~l~----~-- 86 (133)
T 3cxg_A 24 ELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI-------H-PKLN----D-- 86 (133)
T ss_dssp ECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT-------C-HHHH----H--
T ss_pred EecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc-------h-HHHH----H--
Confidence 3444444344466778999999999999999999999999988776 38888888763 1 1111 1
Q ss_pred CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEE-CCCCc--EEEEcCCCCChhhHHHHHHhhh
Q 027311 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLV-DKEGN--VVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~li-d~~G~--I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ |++|+ ++.++.|. +.+++.+.|++++
T Consensus 87 -------------------~~-------------~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 87 -------------------QH-------------NIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp -------------------HT-------------TCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred -------------------hc-------------CCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 12 77889999998 44555 99999887 7889999998876
No 132
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=5.7e-15 Score=106.06 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=74.4
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.+|++||.||++||++|+...|.+.++.+++++. +.++.|++|. . .++. +
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~-------~-~~l~----~----------------- 83 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADK-------H-QSLG----G----------------- 83 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTT-------C-HHHH----H-----------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCC-------C-HHHH----H-----------------
Confidence 4789999999999999999999999999999865 9999998773 2 1111 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|++++++++|+++.++.|..+.+++.+.|.+.+
T Consensus 84 ----~~-------------~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 84 ----QY-------------GVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp ----HH-------------TCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred ----Hc-------------CCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 12 77788999999999987788899888888988888765
No 133
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.61 E-value=6.8e-16 Score=114.88 Aligned_cols=90 Identities=13% Similarity=0.064 Sum_probs=76.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.|+++||+||++||++|+...|.++++.++++++ +.++.|++|. .. ++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~-------~~-~l----------------------- 110 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA-------HP-AV----------------------- 110 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------ST-HH-----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc-------cH-HH-----------------------
Confidence 5889999999999999999999999999999865 9999999873 11 11
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
...| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 111 --~~~~-------------~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 111 --AGRH-------------RIQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp --HHHT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred --HHHc-------------CCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 1112 78889999988 799999999999999999999998874
No 134
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.61 E-value=5.2e-15 Score=103.70 Aligned_cols=102 Identities=13% Similarity=0.148 Sum_probs=80.9
Q ss_pred eCCCCCeecCC-ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 75 KDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 75 ~~~~G~~~~l~-~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
.+++++.+... .-+|++++|.||++||++|+...|.++++.++++++ +.++.|++|. +. ++ . +
T Consensus 10 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~-~~---~-~--- 73 (115)
T 1thx_A 10 ITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------NP-TT---V-K--- 73 (115)
T ss_dssp EECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------CH-HH---H-H---
T ss_pred EEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------CH-HH---H-H---
Confidence 34445544422 125889999999999999999999999999999865 9999999873 21 11 1 1
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 74 ------------------~~-------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 112 (115)
T 1thx_A 74 ------------------KY-------------KVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHL 112 (115)
T ss_dssp ------------------HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ------------------Hc-------------CCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 12 77788999999 99999999999988999999999887
No 135
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.61 E-value=2.6e-15 Score=108.02 Aligned_cols=90 Identities=21% Similarity=0.277 Sum_probs=76.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.++++++ +.++.|++|. +.
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~-------------------------- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP-------------------------- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC--------------------------
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH--------------------------
Confidence 5899999999999999999999999999999765 9999998773 10
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
...+.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 85 ~l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 85 GTAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp TTSGGG-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHHc-------------CCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 011123 78889999999 999999999999999999999999874
No 136
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.61 E-value=2.2e-15 Score=122.72 Aligned_cols=90 Identities=14% Similarity=0.244 Sum_probs=74.7
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
.+||++||+||++||++|+.+.|.+.++.++++++ +.++.|++|. +. ++ . ++
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~-------~~-~~---~-~~--------------- 75 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDA-------EQ-MI---A-AQ--------------- 75 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTT-------CH-HH---H-HT---------------
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCcc-------CH-HH---H-HH---------------
Confidence 35899999999999999999999999999999865 9999999873 21 11 1 11
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +|.++|+++++ ++|+++.++.|..+.+.+.+.|+..+
T Consensus 76 ------~-------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 76 ------F-------------GLRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp ------T-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred ------c-------------CCCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 2 78889999999 79999999999988888888887653
No 137
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=2.5e-15 Score=109.30 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=80.2
Q ss_pred EeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCC--eEEEEEecCCCCCCCCCCHHHHHHHHHhh
Q 027311 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQEPGDNEQIQEFACTR 151 (225)
Q Consensus 74 l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~--~~iv~Is~d~~~~~~~~~~~~~~~~~~~~ 151 (225)
+.+++++.+...-.+||++||.||++||++|+...|.+.++.+++++++ +.++.|+++. . .+ .+ +
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~-~~---~~-~- 85 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS-------A-SM---LA-S- 85 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT-------C-HH---HH-H-
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc-------c-HH---HH-H-
Confidence 4455666555433468999999999999999999999999999998763 7788777652 1 11 11 1
Q ss_pred cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 152 FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 152 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+ +.++.|..+.+++.+.|+++++
T Consensus 86 --------------------~~-------------~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~ 124 (140)
T 2dj1_A 86 --------------------KF-------------DVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQ 124 (140)
T ss_dssp --------------------HT-------------TCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHS
T ss_pred --------------------HC-------------CCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcC
Confidence 12 77788999999 7899 6788898999999999998763
No 138
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.60 E-value=5e-15 Score=103.57 Aligned_cols=89 Identities=13% Similarity=0.206 Sum_probs=69.8
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.++++..++.++.|++|. .. ++ . +
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~-~~---~-~----------------- 70 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------NS-EI---S-E----------------- 70 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------CH-HH---H-H-----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------CH-HH---H-H-----------------
Confidence 489999999999999999999999999999765669999999873 21 11 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|.. ++++.+.|++++
T Consensus 71 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~~ 108 (112)
T 3d6i_A 71 ----LF-------------EISAVPYFIII-HKGTILKELSGAD-PKEYVSLLEDCK 108 (112)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEECSCC-HHHHHHHHHHHH
T ss_pred ----Hc-------------CCCcccEEEEE-ECCEEEEEecCCC-HHHHHHHHHHHH
Confidence 12 77788998887 7999999999874 556888888775
No 139
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.60 E-value=2.9e-15 Score=107.20 Aligned_cols=89 Identities=13% Similarity=0.167 Sum_probs=72.7
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
.+||++||.||++||++|+...|.++++.++++ ++.++.|++|. . .++. +
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~-------~-~~l~----~---------------- 85 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE-------L-KSVA----S---------------- 85 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------S-HHHH----H----------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc-------C-HHHH----H----------------
Confidence 369999999999999999999999999999986 59999998873 2 1111 1
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.| .+++++.+.|+++++
T Consensus 86 -----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 86 -----DW-------------AIQAMPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHLA 124 (124)
T ss_dssp -----HT-------------TCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHCC
T ss_pred -----Hc-------------CCCccCEEEEE-ECCEEEEEEeC-CCHHHHHHHHHHhcC
Confidence 12 77788997666 89999999988 478899999998874
No 140
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.60 E-value=4.4e-15 Score=102.71 Aligned_cols=102 Identities=14% Similarity=0.216 Sum_probs=79.5
Q ss_pred eCCCCCeecCC-ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 75 KDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 75 ~~~~G~~~~l~-~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
..++++.+... .-+|++++|.||++||++|+...+.++++.+++++ ++.++.|++|. +.+ +
T Consensus 5 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~~-~--------- 66 (107)
T 2i4a_A 5 LAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NPE-T--------- 66 (107)
T ss_dssp EECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CCH-H---------
T ss_pred eecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CHH-H---------
Confidence 34445544321 13588999999999999999999999999999986 49999999873 111 1
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.+.| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 67 ----------------~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 67 ----------------PNAY-------------QVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp ----------------HHHT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred ----------------HHhc-------------CCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 1112 77788999999 99999999999989999999998764
No 141
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.60 E-value=4.3e-15 Score=103.77 Aligned_cols=88 Identities=13% Similarity=0.118 Sum_probs=72.6
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCC
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDN 168 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 168 (225)
||+++|.||++||++|+...|.++++.+++++ ++.++.|+.|. . .++. +
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~-~~~~----~------------------ 72 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA-------V-AAVA----E------------------ 72 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------T-HHHH----H------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc-------h-HHHH----H------------------
Confidence 89999999999999999999999999999976 59999999873 1 2111 1
Q ss_pred chhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 169 AAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 73 ---~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 73 ---AA-------------GITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp ---HH-------------TCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred ---Hc-------------CCCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 12 67778996555 899999999998 88899999998874
No 142
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=4.7e-15 Score=106.75 Aligned_cols=90 Identities=16% Similarity=0.116 Sum_probs=74.1
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc---CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN---QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~---~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
.+|++||.||++||++|+...|.+.++.+++++ .++.++.|+.|. .. +
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~-~--------------------- 74 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------NQ-V--------------------- 74 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------CC-H---------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------CH-H---------------------
Confidence 478999999999999999999999999999973 349999998763 11 1
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
....| ++.++|+++++++ |+++.++.|..+.+++.+.|++++
T Consensus 75 ----l~~~~-------------~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 75 ----LASRY-------------GIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp ----HHHHH-------------TCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHH
T ss_pred ----HHHhC-------------CCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHh
Confidence 11122 7788999999987 889999999989999999998875
No 143
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.59 E-value=2.8e-15 Score=103.36 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=78.9
Q ss_pred eCCCCCeecCCc-cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 75 KDAKGQDVDLSI-YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 75 ~~~~G~~~~l~~-~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
.+.+++.+...- -.||+++|.||++||++|+...|.++++.++++++ +.++.|+.|. +. ++ + ++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~~---~-~~-- 67 (105)
T 1fb6_A 3 QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDE-------AP-GI---A-TQ-- 67 (105)
T ss_dssp EECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-HH---H-HH--
T ss_pred eechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcc-------hH-HH---H-Hh--
Confidence 345555554322 25789999999999999999999999999999865 9999998773 21 11 1 11
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 68 -------------------~-------------~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 68 -------------------Y-------------NIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp -------------------T-------------TCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred -------------------C-------------CCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 2 67778997666 79999999999999999999998875
No 144
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.59 E-value=3.9e-15 Score=106.12 Aligned_cols=91 Identities=18% Similarity=0.235 Sum_probs=72.4
Q ss_pred ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 86 ~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
+.+||+++|.||++||++|+...|.++++.++++ ++.++.|+.++ ...++.
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~-------~~~~~~-------------------- 84 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ-------ENKTLA-------------------- 84 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------TTHHHH--------------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc-------chHHHH--------------------
Confidence 3478999999999999999999999999999986 48999998762 111111
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
+.| ++.++|+ ++++++|+++.++.|.. .+++.+.|+++++
T Consensus 85 -----~~~-------------~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~~ 124 (124)
T 1faa_A 85 -----KEL-------------GIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAARS 124 (124)
T ss_dssp -----HHH-------------CCSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHHTC
T ss_pred -----HHc-------------CCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 112 7788898 56669999999998876 8899999998864
No 145
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.59 E-value=9.9e-16 Score=108.87 Aligned_cols=111 Identities=19% Similarity=0.220 Sum_probs=80.4
Q ss_pred CCceecCeEEeCCCCCeecCCc--cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHH
Q 027311 65 SKTSVHDFSVKDAKGQDVDLSI--YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (225)
Q Consensus 65 ~g~~~p~f~l~~~~G~~~~l~~--~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~ 142 (225)
.|...+.+...+.++-.-.+.+ .+||+++|.||++||++|+...|.++++.+++++ +.++.|++|. ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~-------~~- 77 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE-------LK- 77 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH-
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC-------CH-
Confidence 4555566666554332222332 2589999999999999999999999999999875 9999998873 21
Q ss_pred HHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 143 QIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
++ . ++ | ++.++|+++++ ++|+++.++.|.. .+++.+.|++
T Consensus 78 ~~---~-~~---------------------~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 117 (122)
T 2vlu_A 78 PI---A-EQ---------------------F-------------SVEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVGL 117 (122)
T ss_dssp HH---H-HH---------------------T-------------TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHH
T ss_pred HH---H-HH---------------------c-------------CCCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHHH
Confidence 11 1 11 2 77788996666 8999999999988 8899999998
Q ss_pred hhC
Q 027311 223 LCC 225 (225)
Q Consensus 223 ll~ 225 (225)
+++
T Consensus 118 ~l~ 120 (122)
T 2vlu_A 118 HAA 120 (122)
T ss_dssp HHS
T ss_pred Hhc
Confidence 763
No 146
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.59 E-value=2e-15 Score=103.62 Aligned_cols=89 Identities=15% Similarity=0.182 Sum_probs=74.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+|++++|.||++||++|+...+.++++.+++++ +.++.|+.|. . .++ . +
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------~-~~~---~-~----------------- 63 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------N-PDI---A-A----------------- 63 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------C-HHH---H-H-----------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------C-HHH---H-H-----------------
Confidence 589999999999999999999999999999875 9999999873 2 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 64 ----~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 64 ----RY-------------GVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ----HT-------------TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ----hC-------------CccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 12 67778999999 899999999999899999999998874
No 147
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.59 E-value=1.9e-15 Score=110.36 Aligned_cols=89 Identities=8% Similarity=0.050 Sum_probs=74.9
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.+|++||.||++||++|+...|.+.++.++++++ +.++.|++|. . .++. +
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~-~~l~----~----------------- 72 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIAT-------N-PWTA----E----------------- 72 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTT-------C-HHHH----H-----------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCc-------C-HhHH----H-----------------
Confidence 4899999999999999999999999999999875 9999999873 2 2211 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 73 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 73 ----KY-------------GVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp ----HH-------------TCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred ----HC-------------CCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 12 77788987777 89999999999999999999998876
No 148
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=4.7e-15 Score=106.05 Aligned_cols=101 Identities=12% Similarity=0.122 Sum_probs=76.9
Q ss_pred EeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 74 l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
+.+++++.+. ...++ .++|.||++||++|+...|.+.++.+++++.++.++.|++|. .. ++ + +
T Consensus 9 v~~l~~~~f~-~~~~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~-------~~-~~---~-~--- 71 (126)
T 1x5e_A 9 VRVITDENWR-ELLEG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE-------QP-GL---S-G--- 71 (126)
T ss_dssp EEECCTTTHH-HHTSS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT-------CH-HH---H-H---
T ss_pred cEEecHHHHH-HHhCC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC-------CH-HH---H-H---
Confidence 3344444443 12344 489999999999999999999999999987679999998873 21 11 1 1
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|++ .++.|..+.+++.+.|++++
T Consensus 72 ------------------~~-------------~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 72 ------------------RF-------------IINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp ------------------HT-------------TCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCG
T ss_pred ------------------Hc-------------CCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHh
Confidence 12 77788999999 89995 68889888999999998765
No 149
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.58 E-value=3.5e-15 Score=106.18 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=74.9
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.++++++++.++.|++|. . .++. +
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------~-~~~~----~----------------- 82 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------Q-SQIA----Q----------------- 82 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------C-HHHH----H-----------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------C-HHHH----H-----------------
Confidence 588999999999999999999999999999987679999999873 2 1111 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 83 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 83 ----EV-------------GIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp ----HH-------------TCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred ----Hc-------------CCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 12 67778998887 699999999998 88999999999874
No 150
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.58 E-value=4.5e-15 Score=105.18 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=80.8
Q ss_pred EEeCCCCCeecCC-ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc----CCeEEEEEecCCCCCCCCCCHHHHHHH
Q 027311 73 SVKDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNEQIQEF 147 (225)
Q Consensus 73 ~l~~~~G~~~~l~-~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~----~~~~iv~Is~d~~~~~~~~~~~~~~~~ 147 (225)
.+.+++++.+... ..+||+++|.||++||++|+...|.++++.+++++ .++.++.|+.+. .
T Consensus 8 ~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~------- 73 (121)
T 2djj_A 8 PVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA-------N------- 73 (121)
T ss_dssp SSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT-------S-------
T ss_pred CeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc-------c-------
Confidence 3556677766654 24789999999999999999999999999999986 258888888652 0
Q ss_pred HHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcE-EEEcCCCCChhhHHHHHHhhh
Q 027311 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV-VERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I-~~~~~g~~~~~~l~~~l~~ll 224 (225)
+ + . . ++.++|++++++++|++ +.++.|..+.+++.+.|++++
T Consensus 74 ---------~-~--~----------------------~-~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 74 ---------D-V--P----------------------D-EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp ---------C-C--S----------------------S-CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred ---------c-c--c----------------------c-ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 0 0 0 0 35568999999998885 678889888999999998876
No 151
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.58 E-value=1.6e-15 Score=110.36 Aligned_cols=93 Identities=16% Similarity=0.273 Sum_probs=75.0
Q ss_pred ecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeee
Q 027311 82 VDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDK 161 (225)
Q Consensus 82 ~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (225)
+..++.+||+++|+||++||++|+.+.|.++++.++++ ++.++.|++|. . .++ . +
T Consensus 39 ~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------~-~~~---~-~----------- 93 (139)
T 3d22_A 39 LSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------L-SDF---S-A----------- 93 (139)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S-HHH---H-H-----------
T ss_pred HHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------c-HHH---H-H-----------
Confidence 44444579999999999999999999999999999984 49999999873 2 111 1 1
Q ss_pred ecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 162 VDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|. +.+++.+.|++++
T Consensus 94 ----------~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~ 131 (139)
T 3d22_A 94 ----------SW-------------EIKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAIL 131 (139)
T ss_dssp ----------HT-------------TCCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred ----------Hc-------------CCCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHh
Confidence 12 77788998877 999999999998 7888999988875
No 152
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.58 E-value=3.2e-15 Score=103.59 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=75.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...+.++++.++++++ +.++.|++|. +. ++ . +
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~-~~---~-~----------------- 66 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDE-------NP-KT---A-M----------------- 66 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH-HH---H-H-----------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCC-------CH-hH---H-H-----------------
Confidence 5889999999999999999999999999999864 9999999873 21 11 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 67 ----~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 67 ----RY-------------RVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred ----hC-------------CCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 12 67778999999 89999999999988999999999876
No 153
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.58 E-value=1.1e-16 Score=120.36 Aligned_cols=111 Identities=9% Similarity=0.069 Sum_probs=79.9
Q ss_pred ecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHH
Q 027311 69 VHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFA 148 (225)
Q Consensus 69 ~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~ 148 (225)
.+++...+.+ +.++....+||++||+||++||++|+.+.|.++++.+.++. ++.++.|++|. +.+.
T Consensus 27 ~~~i~w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~-------~~~~----- 92 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLED-------EEEP----- 92 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG-------GGSC-----
T ss_pred cccccccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC-------CchH-----
Confidence 4445555554 55666667899999999999999999999999998776553 36777787763 0000
Q ss_pred HhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC----------CChhhHHH
Q 027311 149 CTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT----------TSPLSIEV 218 (225)
Q Consensus 149 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~----------~~~~~l~~ 218 (225)
....|.. ++.++|+++++|++|+++.+..|. .+.+++.+
T Consensus 93 --------------------~~~~~~~-----------~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~ 141 (164)
T 1sen_A 93 --------------------KDEDFSP-----------DGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQ 141 (164)
T ss_dssp --------------------SCGGGCT-----------TCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHH
T ss_pred --------------------HHHHhcc-----------cCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHH
Confidence 0011200 335689999999999999888884 66788888
Q ss_pred HHHhhh
Q 027311 219 VLECLC 224 (225)
Q Consensus 219 ~l~~ll 224 (225)
.|++++
T Consensus 142 ~l~~~l 147 (164)
T 1sen_A 142 GMKEAQ 147 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888775
No 154
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.57 E-value=8.2e-15 Score=102.10 Aligned_cols=89 Identities=16% Similarity=0.242 Sum_probs=75.1
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
++++++|.||++||++|+...|.+.++.++++++ +.++.|++|. . .++. ++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~-~~l~----~~---------------- 71 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEE-------E-KTLF----QR---------------- 71 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------C-HHHH----HH----------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCc-------C-hhHH----Hh----------------
Confidence 5789999999999999999999999999999864 9999999873 2 2111 11
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 72 -----~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 72 -----F-------------SLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp -----T-------------TCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred -----c-------------CCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 2 77788999999 79999999999999999999999876
No 155
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=8.4e-15 Score=105.58 Aligned_cols=107 Identities=18% Similarity=0.177 Sum_probs=78.5
Q ss_pred eEEeCCCCCeecCCcc-CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcC-CeEEEEEecCCCCCCCCCCHHHHHHHHH
Q 027311 72 FSVKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCNQFGAQEPGDNEQIQEFAC 149 (225)
Q Consensus 72 f~l~~~~G~~~~l~~~-~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~-~~~iv~Is~d~~~~~~~~~~~~~~~~~~ 149 (225)
-.+.+++++.+...-. +||+++|.||++||++|+.+.|.++++.++++++ ++.++.|..+. .
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~-------~--------- 70 (133)
T 2dj3_A 7 GPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA-------N--------- 70 (133)
T ss_dssp CSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT-------S---------
T ss_pred CceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc-------C---------
Confidence 3455566666654443 4899999999999999999999999999999853 48888877552 0
Q ss_pred hhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEE-EcC-CCCChhhHHHHHHhhh
Q 027311 150 TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVE-RYA-PTTSPLSIEVVLECLC 224 (225)
Q Consensus 150 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~-~~~-g~~~~~~l~~~l~~ll 224 (225)
+. ....| ++.++|+++++++.|++.. .+. |..+.+++.+.|++++
T Consensus 71 -------~~----------~~~~~-------------~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 71 -------DI----------TNDQY-------------KVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp -------CC----------CCSSC-------------CCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHS
T ss_pred -------HH----------HHhhc-------------CCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhc
Confidence 00 01112 8888999999998776532 455 5578889999998876
No 156
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.57 E-value=6.7e-15 Score=101.50 Aligned_cols=89 Identities=18% Similarity=0.224 Sum_probs=73.7
Q ss_pred ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 86 ~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
+.+||+++|.||++||++|+...|.++++.+++++ +.++.|+.|. . .++. +
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~-------~-~~~~----~--------------- 67 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDD-------C-QDVA----S--------------- 67 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTT-------C-HHHH----H---------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhh-------h-HHHH----H---------------
Confidence 34689999999999999999999999999999865 9999998773 2 1111 1
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 68 ------~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 68 ------ES-------------EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp ------HT-------------TCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ------Hc-------------CCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 12 77788999999 889999999998 8899999998875
No 157
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.57 E-value=1.2e-15 Score=119.08 Aligned_cols=107 Identities=15% Similarity=0.205 Sum_probs=84.9
Q ss_pred cCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHH
Q 027311 70 HDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFAC 149 (225)
Q Consensus 70 p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~ 149 (225)
++..+.+++++.+.....+|+++||.||++||++|+...|.++++.++++++ +.++.|++|. . .++ +
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~-------~-~~l---~- 161 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGD-------D-RML---C- 161 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------C-HHH---H-
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCc-------c-HHH---H-
Confidence 3444555666655544457899999999999999999999999999999765 9999999873 2 111 1
Q ss_pred hhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 150 TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 150 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
++ | ++.++|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 162 ~~---------------------~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 162 RM---------------------K-------------GVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp HH---------------------T-------------TCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHH
T ss_pred HH---------------------c-------------CCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhC
Confidence 11 2 77788999999 99999999999999999999998876
No 158
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.57 E-value=1.5e-14 Score=104.58 Aligned_cols=88 Identities=10% Similarity=0.083 Sum_probs=75.2
Q ss_pred CCEEEEEEcccCC--CCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 89 GKLLLIVNVASQC--GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 89 gk~vlv~F~~twC--~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
++++||+|||+|| ++|+...|.|.++.++|+++ +.++-|++|+ ..++. .
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe--------~~~la----~---------------- 83 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEA--------ERGLM----A---------------- 83 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGG--------HHHHH----H----------------
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCC--------CHHHH----H----------------
Confidence 3499999999999 99999999999999999865 9999999873 22222 1
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| +|.++||.+++ ++|+++.+..|..+.+++.+.|++++
T Consensus 84 -----~y-------------gV~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 84 -----RF-------------GVAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp -----HH-------------TCCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -----Hc-------------CCccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 13 88999998888 99999999999999999999998765
No 159
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.56 E-value=1.7e-14 Score=106.06 Aligned_cols=89 Identities=11% Similarity=0.019 Sum_probs=71.3
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.+++|||+|||+||++|+...|.|.++.++++++ +.|+-|++|+. ++
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~-------~e------------------------- 86 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEV-------PD------------------------- 86 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTC-------CT-------------------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCC-------HH-------------------------
Confidence 4689999999999999999999999999999765 89999998841 00
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEE--E-------EcCCCCC-hhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV--E-------RYAPTTS-PLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~--~-------~~~g~~~-~~~l~~~l~~ll 224 (225)
....| +|.++||++++ ++|+.+ . +..|..+ .+++.+.|++++
T Consensus 87 -~a~~y-------------~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 87 -FNTMY-------------ELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp -TTTTT-------------TCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred -HHHHc-------------CCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 11123 88899998877 778887 4 7788776 778888888765
No 160
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.33 E-value=2.9e-16 Score=112.98 Aligned_cols=101 Identities=13% Similarity=0.165 Sum_probs=79.3
Q ss_pred CCeecCCccCCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCC
Q 027311 79 GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (225)
Q Consensus 79 G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (225)
.+.+++...+||++||+||++||++|+...|.+ .++.+.++++ +.++.|++|. .+ ..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~--------~~-~~---------- 68 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR-FVVASVSVDT--------PE-GQ---------- 68 (130)
Confidence 566777888899999999999999999999999 8888887654 8888887652 00 00
Q ss_pred cceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECC-CCcE--EEEcCCCCChhhHHHHHHhhh
Q 027311 156 FPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK-EGNV--VERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 156 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~-~G~I--~~~~~g~~~~~~l~~~l~~ll 224 (225)
.....| ++.++|+++++|+ +|++ +.++.|..+.+++.+.|++++
T Consensus 69 ------------~~~~~~-------------~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 69 ------------ELARRY-------------RVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 011112 7888999999996 5999 889999888889999988876
No 161
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.55 E-value=1.4e-14 Score=107.29 Aligned_cols=87 Identities=8% Similarity=0.084 Sum_probs=71.9
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||++||.||++||++|+...|.++++.++++ ++.++.|++|. . .++ . +
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------~-~~l---~-~----------------- 79 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------V-PEV---S-E----------------- 79 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S-HHH---H-H-----------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------C-HHH---H-H-----------------
Confidence 48999999999999999999999999999984 59999999873 1 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|++++++ +|+++.++.|. +++++.+.|++++
T Consensus 80 ----~~-------------~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 117 (153)
T 2wz9_A 80 ----KY-------------EISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHA 117 (153)
T ss_dssp ----HT-------------TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHS
T ss_pred ----Hc-------------CCCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHh
Confidence 12 778899999998 99999998885 6778999998876
No 162
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.55 E-value=1e-14 Score=102.75 Aligned_cols=85 Identities=18% Similarity=0.276 Sum_probs=69.2
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.+++++ +.++.|++|. +. ++ + ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~-------~~-~l---~-~~---------------- 78 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE-------SP-DI---A-KE---------------- 78 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT-------CH-HH---H-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH-HH---H-HH----------------
Confidence 589999999999999999999999999999865 9999998873 21 11 1 11
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
| ++.++|+++++ ++|+++.++.|.. ++++++.|++
T Consensus 79 -----~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 79 -----C-------------EVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp -----T-------------TCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred -----C-------------CCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 2 67778997765 9999999999987 8888888775
No 163
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.55 E-value=1.4e-14 Score=100.57 Aligned_cols=87 Identities=14% Similarity=0.159 Sum_probs=70.1
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.++++ ++.++.|++|. . .++ . +
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~-------~-~~~---~-~----------------- 68 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ-------C-QGT---A-A----------------- 68 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S-HHH---H-H-----------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc-------C-HHH---H-H-----------------
Confidence 58999999999999999999999999999984 49999999873 2 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|.. .+++.+.|++++
T Consensus 69 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~l 106 (107)
T 1gh2_A 69 ----TN-------------NISATPTFQFF-RNKVRIDQYQGAD-AVGLEEKIKQHL 106 (107)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred ----hc-------------CCCcccEEEEE-ECCeEEEEEeCCC-HHHHHHHHHHhc
Confidence 12 77788998888 8999999998854 456999888875
No 164
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.54 E-value=1.2e-14 Score=104.25 Aligned_cols=87 Identities=9% Similarity=0.134 Sum_probs=71.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+|+++||.||++||++|+...|.++++.++++ ++.++.|++|. . .++. +
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~-------~-~~l~----~----------------- 84 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN-------N-SEIV----S----------------- 84 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT-------C-HHHH----H-----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------C-HHHH----H-----------------
Confidence 68999999999999999999999999999984 49999999873 2 1111 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.| .+++++.+.|++++
T Consensus 85 ----~~-------------~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l 122 (125)
T 1r26_A 85 ----KC-------------RVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDII 122 (125)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred ----Hc-------------CCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHh
Confidence 12 77788996666 89999999998 57889999998876
No 165
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.54 E-value=2.4e-14 Score=98.76 Aligned_cols=89 Identities=24% Similarity=0.339 Sum_probs=71.5
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
.+|++++|.||++||++|+...|.++++.+++++ ++.++.|+.|. . .++ . ++
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------~-~~~---~-~~--------------- 69 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDE-------C-EDI---A-ME--------------- 69 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------C-HHH---H-HH---------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccc-------h-HHH---H-HH---------------
Confidence 4689999999999999999999999999999874 49999999873 2 111 1 11
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| ++.++|+++++ ++|+++.++.| .+++++.+.|+++|
T Consensus 70 ------~-------------~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 70 ------Y-------------NISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp ------T-------------TCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred ------c-------------CCCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 2 67778996655 89999999999 67888999998765
No 166
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.54 E-value=1.4e-14 Score=99.68 Aligned_cols=89 Identities=18% Similarity=0.282 Sum_probs=71.6
Q ss_pred ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 86 ~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
+.+||+++|.||++||++|+...+.++++.++++ ++.++.|+.|. .. ++ . +
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~-~~---~-~--------------- 66 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ-------NE-EA---A-A--------------- 66 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------CH-HH---H-H---------------
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC-------CH-HH---H-H---------------
Confidence 3468999999999999999999999999999986 59999999873 21 11 1 1
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.| .+.+++.+.|++++
T Consensus 67 ------~~-------------~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 67 ------KY-------------SVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp ------HT-------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ------Hc-------------CCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 12 67778997766 59999999999 57888999998875
No 167
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.54 E-value=2.3e-14 Score=100.06 Aligned_cols=89 Identities=12% Similarity=0.180 Sum_probs=72.4
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
.+|++++|.||++||++|....+.++++.++++ ++.++.|+.|. .. ++. +
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~-~~~----~---------------- 73 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE-------LK-AVA----E---------------- 73 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------CH-HHH----H----------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc-------cH-HHH----H----------------
Confidence 358999999999999999999999999999986 59999998873 22 111 1
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.| .+.+++.+.|+++++
T Consensus 74 -----~~-------------~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 74 -----EW-------------NVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp -----HH-------------HCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred -----hC-------------CCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 12 67778998887 79999999988 578899999998763
No 168
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.54 E-value=1.1e-14 Score=102.69 Aligned_cols=90 Identities=21% Similarity=0.262 Sum_probs=71.5
Q ss_pred CCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeec
Q 027311 84 LSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVD 163 (225)
Q Consensus 84 l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 163 (225)
+++.+||+++|.||++||++|+...|.++++.+++ ++.++.|+.|. . .++ + ++
T Consensus 28 l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~-------~-~~~---~-~~------------ 80 (117)
T 2xc2_A 28 LEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK-------L-EET---A-RK------------ 80 (117)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT-------S-HHH---H-HH------------
T ss_pred HHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc-------c-HHH---H-HH------------
Confidence 34447899999999999999999999999999887 59999998763 1 111 1 11
Q ss_pred CCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 164 VNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| ++.++|+++++ ++|+++.++.| .+++++.+.|+++|
T Consensus 81 ---------~-------------~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 81 ---------Y-------------NISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp ---------T-------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ---------c-------------CCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 2 77788996666 89999999998 57888999998875
No 169
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.54 E-value=2.9e-14 Score=103.83 Aligned_cols=104 Identities=16% Similarity=0.191 Sum_probs=73.5
Q ss_pred EeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 74 l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
+.+++++.+...-.+++.+||.||++||++|+...|.++++.++++++ +.++.|++|. . .++ . +
T Consensus 35 v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~-~~l---~-~--- 98 (140)
T 1v98_A 35 VVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDE-------H-PGL---A-A--- 98 (140)
T ss_dssp --------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------C-HHH---H-H---
T ss_pred cccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCC-------C-HHH---H-H---
Confidence 344555555443333434999999999999999999999999999864 9999999873 2 111 1 1
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 99 ------------------~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 99 ------------------RY-------------GVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp ------------------HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ------------------HC-------------CCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 12 67778998888 799999999999889999999998863
No 170
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.54 E-value=1.6e-14 Score=100.96 Aligned_cols=88 Identities=7% Similarity=0.126 Sum_probs=71.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
++++++|.||++||++|+...|.++++.++++ ++.++.|++|. . .++ . +
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~-------~-~~l---~-~----------------- 66 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA-------R-PEL---M-K----------------- 66 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG-------C-HHH---H-H-----------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC-------C-HHH---H-H-----------------
Confidence 57899999999999999999999999998875 48888888762 1 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|..+++++.+.|++..
T Consensus 67 ----~~-------------~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 67 ----EL-------------GFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp ----HT-------------TCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC-
T ss_pred ----Hc-------------CCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 12 77788999999 99999999999999999999888653
No 171
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.54 E-value=2.3e-14 Score=100.34 Aligned_cols=88 Identities=11% Similarity=0.157 Sum_probs=71.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.++++ ++.++.|++|. . .++ + +
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~-------~-~~~---~-~----------------- 73 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE-------V-SEV---T-E----------------- 73 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------T-HHH---H-H-----------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC-------C-HHH---H-H-----------------
Confidence 68999999999999999999999999999986 49999999873 1 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 74 ----~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 112 (112)
T 1syr_A 74 ----KE-------------NITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKYAA 112 (112)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTTC-
T ss_pred ----Hc-------------CCCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHhhC
Confidence 12 67778986555 799999999998 88999999998864
No 172
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.53 E-value=1.9e-14 Score=104.33 Aligned_cols=91 Identities=10% Similarity=0.064 Sum_probs=75.3
Q ss_pred CCCEEEEEEcccC--CCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 88 KGKLLLIVNVASQ--CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 88 ~gk~vlv~F~~tw--C~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
.++++||+||++| |++|+...|.|.++.++|+++.+.++-|++|+ ..++ + .+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe--------~~~l---A-~~-------------- 86 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ--------SEAI---G-DR-------------- 86 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH--------HHHH---H-HH--------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC--------CHHH---H-HH--------------
Confidence 4568899999999 99999999999999999975448999998762 2222 1 21
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
| +|.++||.+++ ++|+++.+..|..+.+++.+.|+++++
T Consensus 87 -------y-------------gV~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 87 -------F-------------GAFRFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp -------H-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -------c-------------CCccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 3 88999998888 999999999999999999999998763
No 173
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.52 E-value=2.7e-14 Score=102.27 Aligned_cols=105 Identities=6% Similarity=-0.056 Sum_probs=77.7
Q ss_pred EEeCCCCCeecCCcc-CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc----CCeEEEEEecCCCCCCCCCCHHHHHHH
Q 027311 73 SVKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN----QGLEILAFPCNQFGAQEPGDNEQIQEF 147 (225)
Q Consensus 73 ~l~~~~G~~~~l~~~-~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~----~~~~iv~Is~d~~~~~~~~~~~~~~~~ 147 (225)
.+.+++++.+...-. .+++++|.||++||++|+...|.+.++.+++.. .++.++.|+.|. . .++
T Consensus 16 ~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~-------~-~~l--- 84 (127)
T 3h79_A 16 RVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK-------Y-PDV--- 84 (127)
T ss_dssp CCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT-------C-HHH---
T ss_pred ceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc-------c-HhH---
Confidence 344556655543222 489999999999999999999999999998752 348899898763 1 221
Q ss_pred HHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEE-EEcCCCCChhhHHHHHHhh
Q 027311 148 ACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV-ERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~-~~~~g~~~~~~l~~~l~~l 223 (225)
+ ++ | +|.++|+++++++.|++. ..+.|..+.+++.+.|+++
T Consensus 85 ~-~~---------------------~-------------~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 85 I-ER---------------------M-------------RVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp H-HH---------------------T-------------TCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred H-Hh---------------------c-------------CCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 1 11 2 778899999998877753 5678888899999988764
No 174
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.52 E-value=6.5e-15 Score=104.39 Aligned_cols=101 Identities=16% Similarity=0.215 Sum_probs=76.8
Q ss_pred EeCCCCCeecCCc-c--CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHh
Q 027311 74 VKDAKGQDVDLSI-Y--KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACT 150 (225)
Q Consensus 74 l~~~~G~~~~l~~-~--~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~ 150 (225)
+.+.+|+..++.+ . .||++||.||++||++|+...|.++++.+++ .++.++.|++|. . .++ . +
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~-------~-~~~---~-~ 70 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK-------N-GNA---A-D 70 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT-------C-HHH---H-H
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC-------C-HHH---H-H
Confidence 3455666666652 2 4899999999999999999999999999998 459999999873 2 111 1 1
Q ss_pred hcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECC---CCcEEEEcCCCCChhhHHHHHHhh
Q 027311 151 RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK---EGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~---~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
.| ++.++|++++++. +|+++.++.|..+ +++++.+++.
T Consensus 71 ---------------------~~-------------~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 71 ---------------------AY-------------GVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp ---------------------HT-------------TCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHH
T ss_pred ---------------------hc-------------CCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHh
Confidence 12 7778899999976 5999999998764 4588877654
No 175
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.52 E-value=9.9e-15 Score=105.90 Aligned_cols=96 Identities=10% Similarity=0.109 Sum_probs=71.8
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
++ +++|+||++||++|+.+.|.++++.++++ +.++.|++++. .+.....+. .
T Consensus 31 ~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~-----~~~~~~d~~-------------------~ 82 (135)
T 3emx_A 31 QG-DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSL-----IGERELSAA-------------------R 82 (135)
T ss_dssp TS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTT-----CCHHHHHHH-------------------H
T ss_pred CC-cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCc-----hhhhhhhhh-------------------H
Confidence 44 99999999999999999999999998875 88899988631 111111111 0
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.....| ++.++|++++++ +|+++.++.|..+.+.+++.++++++
T Consensus 83 ~l~~~~-------------~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 83 LEMNKA-------------GVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYG 126 (135)
T ss_dssp HHHHHH-------------TCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred HHHHHc-------------CCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 012223 888899766665 99999999999999999999988763
No 176
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.51 E-value=1.9e-14 Score=105.48 Aligned_cols=89 Identities=9% Similarity=-0.006 Sum_probs=68.8
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.||+++|+||++||++|+.+.|.++++.++++++ +.++.|++|. ..+
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~~------------------------- 68 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITE-------VPD------------------------- 68 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTT-------CCT-------------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEcccc-------CHH-------------------------
Confidence 4899999999999999999999999999999765 9999998873 100
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEE---------cCCCCC-hhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVER---------YAPTTS-PLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~---------~~g~~~-~~~l~~~l~~ll 224 (225)
....| ++.++|+++++ ++|+++.+ ..|..+ .+++.+.|++++
T Consensus 69 -~~~~~-------------~i~~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 69 -FNKMY-------------ELYDPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp -TTTSS-------------CSCSSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred -HHHHc-------------CCCCCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 11112 88889999988 57888874 334443 678888888765
No 177
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.51 E-value=4.5e-14 Score=99.36 Aligned_cols=88 Identities=20% Similarity=0.280 Sum_probs=71.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||+++|.||++||++|+...|.++++.++++ ++.++.|+.|. . .++ . +
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~-~~~---~-~----------------- 75 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE-------L-KDV---A-E----------------- 75 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S-HHH---H-H-----------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc-------C-HHH---H-H-----------------
Confidence 48999999999999999999999999999986 59999998763 1 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+++.++.| .+.+++.+.|+++++
T Consensus 76 ----~~-------------~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 76 ----AY-------------NVEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp ----HT-------------TCCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC
T ss_pred ----Hc-------------CCCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhc
Confidence 12 67778997777 89999999888 478899999988764
No 178
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.51 E-value=1.5e-14 Score=113.81 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=81.4
Q ss_pred EEeCCCCCeecCC-ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhh
Q 027311 73 SVKDAKGQDVDLS-IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTR 151 (225)
Q Consensus 73 ~l~~~~G~~~~l~-~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~ 151 (225)
....++.+.+.-. .-++|+++|+||++||++|+.+.|.++++.++++++ +.++.|++|. +.+
T Consensus 13 ~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~~--------- 75 (222)
T 3dxb_A 13 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG--------- 75 (222)
T ss_dssp CCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CTT---------
T ss_pred CceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CHH---------
Confidence 3444555544322 125889999999999999999999999999999876 9999998773 100
Q ss_pred cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 152 FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 152 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
....| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 76 -----------------l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 76 -----------------TAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp -----------------TGGGG-------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred -----------------HHHHc-------------CCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhcc
Confidence 11123 78889998888 589999999999999999999998763
No 179
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.51 E-value=1.4e-14 Score=103.53 Aligned_cols=90 Identities=21% Similarity=0.273 Sum_probs=70.4
Q ss_pred CCCEEEEEEcccCCC--------------CChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 88 KGKLLLIVNVASQCG--------------LTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 88 ~gk~vlv~F~~twC~--------------~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
+||+++|.||++||+ +|+...|.++++.++++++ +.++.|++|. +.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~------------ 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP------------ 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH------------
Confidence 589999999999999 9999999999999998765 9999998773 10
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
...+.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|.
T Consensus 80 --------------~l~~~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 80 --------------GTAPKY-------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp --------------TTGGGG-------------TCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred --------------HHHHHc-------------CCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 011223 88889999999 999999999999899999999998763
No 180
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.5e-14 Score=105.02 Aligned_cols=91 Identities=16% Similarity=0.059 Sum_probs=68.5
Q ss_pred ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 86 ~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
+-++++++|.||++||++|+.+.|.++++.+++++.++.++.|++|. .. ++ + +++++..+
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~-------~~-~~---~-~~~~v~~~-------- 82 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR-------YT-DV---S-TRYKVSTS-------- 82 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT-------CH-HH---H-HHTTCCCC--------
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc-------CH-HH---H-HHccCccc--------
Confidence 34567999999999999999999999999999987569999998773 22 22 2 33333210
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHH
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIE 217 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~ 217 (225)
.++.++|+++++ ++|+++.++.|..+.+++.
T Consensus 83 --------------------~~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~ 113 (137)
T 2dj0_A 83 --------------------PLTKQLPTLILF-QGGKEAMRRPQIDKKGRAV 113 (137)
T ss_dssp --------------------SSSSCSSEEEEE-SSSSEEEEESCBCSSSCBC
T ss_pred --------------------CCcCCCCEEEEE-ECCEEEEEecCcCchHHHH
Confidence 045578999988 7899999999877665443
No 181
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.50 E-value=3.4e-14 Score=100.50 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=73.4
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.|++++|.||++||++|+...|.++++.++++++ +.++.|++|. .. ++ + +
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~~---~-~----------------- 78 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVDT-------NP-ET---A-R----------------- 78 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-HH---H-H-----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH-HH---H-H-----------------
Confidence 4889999999999999999999999999999764 9999999873 21 11 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 79 ----~~-------------~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 79 ----NF-------------QVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp ----HT-------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred ----hc-------------CCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 12 77788998777 69999999999988889999888765
No 182
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.50 E-value=4.7e-14 Score=99.67 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=67.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+|++++|+||++||++|+...|.+.++.++++. .+..++++. ..+.++..++.
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~-----~~~~~~~~~~~------------------- 80 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEE-----PSQLNDLQAFR------------------- 80 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTC-----GGGHHHHHHHH-------------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCC-----cCcHHHHHHHH-------------------
Confidence 578999999999999999999999999998763 355566552 00112222222
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHH
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLE 221 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~ 221 (225)
..| ++.++|+++++ ++|+++.++.|..+.+++.+.|+
T Consensus 81 ---~~~-------------~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 81 ---SRY-------------GIPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp ---HHH-------------TCCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHT
T ss_pred ---HHc-------------CCCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhh
Confidence 123 78889999988 58999999999888888888775
No 183
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.50 E-value=6.1e-14 Score=97.51 Aligned_cols=88 Identities=18% Similarity=0.239 Sum_probs=71.5
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcC--CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ--GLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~--~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
+++++|.||++||++|+...|.+.++.+++... ++.++.|+.|. . .++ . ++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~-~~l---~-~~--------------- 73 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA-------E-RNI---C-SK--------------- 73 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT-------C-HHH---H-HH---------------
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc-------c-HhH---H-Hh---------------
Confidence 789999999999999999999999999987644 58899998763 2 221 1 11
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
| ++.++|+++++ ++|+++.++.|..+.+++.+.|++.
T Consensus 74 ------~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 74 ------Y-------------SVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp ------T-------------TCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred ------c-------------CCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHhc
Confidence 2 77788997777 8899999999999999999988763
No 184
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.49 E-value=2.1e-14 Score=101.17 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=72.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcC--CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ--GLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~--~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
+||+++|.||++||++|+...|.+.++.+++++. ++.++.|..+. .
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~------------------------- 70 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------E------------------------- 70 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------C-------------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------C-------------------------
Confidence 6899999999999999999999999999998754 36777776542 0
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEE--EEcCCCCChhhHHHHHHhhhC
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV--ERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~--~~~~g~~~~~~l~~~l~~ll~ 225 (225)
....+.| ++.++|+++++ ++|+++ .++.|..+.+++.+.|+++++
T Consensus 71 -~~~~~~~-------------~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 71 -SDLAQQY-------------GVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp -CSSHHHH-------------TCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred -HHHHHHC-------------CCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 0112223 78889999999 789877 888898889999999998763
No 185
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.49 E-value=1.7e-14 Score=102.45 Aligned_cols=89 Identities=16% Similarity=0.034 Sum_probs=70.6
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.+|+++|.||++||++|+...|.++++.+++++ ++.++.|++|. .. ++ . +
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~~-~~---~-~----------------- 69 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA-------YP-QT---C-Q----------------- 69 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------CH-HH---H-H-----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC-------CH-HH---H-H-----------------
Confidence 578999999999999999999999999999986 49999999873 21 11 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC----CChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT----TSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~----~~~~~l~~~l~~ll 224 (225)
.| ++.++|++++++++|. +.++.|. .+.+++.+.|++++
T Consensus 70 ----~~-------------~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 70 ----KA-------------GIKAYPSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp ----HT-------------TCCSSSEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHH
T ss_pred ----Hc-------------CCCccceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHH
Confidence 12 7788999999988887 4455543 67889999998876
No 186
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.20 E-value=3.9e-15 Score=102.55 Aligned_cols=103 Identities=17% Similarity=0.273 Sum_probs=77.0
Q ss_pred EeCCCCCeecCCc-cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhc
Q 027311 74 VKDAKGQDVDLSI-YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRF 152 (225)
Q Consensus 74 l~~~~G~~~~l~~-~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~ 152 (225)
+.+++++.+.-.- -+||+++|.||++||++|+...+.++++.++++++ +.++.|+.|. ..+ .
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~--------~~~---~----- 65 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK-VKVVKVNVDE--------NPN---T----- 65 (106)
Confidence 3344444443221 25789999999999999999999999999998753 8888887652 111 0
Q ss_pred CCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 153 KAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 153 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.+.| ++.++|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 66 -----------------~~~~-------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 66 -----------------AAQY-------------GIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 1112 67778999999 89999999999888889999888764
No 187
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.46 E-value=1.1e-13 Score=109.54 Aligned_cols=103 Identities=14% Similarity=0.200 Sum_probs=79.4
Q ss_pred EeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCC--eEEEEEecCCCCCCCCCCHHHHHHHHHhh
Q 027311 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQEPGDNEQIQEFACTR 151 (225)
Q Consensus 74 l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~--~~iv~Is~d~~~~~~~~~~~~~~~~~~~~ 151 (225)
+..++++.+.....+||+++|+||++||++|+.+.|.+.++++++++++ +.++.|+.|. . .++ + ++
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~-------~-~~l---~-~~ 84 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS-------A-SVL---A-SR 84 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-------C-HHH---H-HH
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-------C-HHH---H-Hh
Confidence 4445666565444579999999999999999999999999999998765 8888888763 1 211 1 11
Q ss_pred cCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 152 FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 152 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| ++.++|++++++ +|+++ .+.|..+.+++.+.+++.+
T Consensus 85 ---------------------~-------------~v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 85 ---------------------F-------------DVSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVS 121 (241)
T ss_dssp ---------------------T-------------TCCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHH
T ss_pred ---------------------c-------------CCCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhcc
Confidence 2 778899999995 67776 5888888999999888764
No 188
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.45 E-value=1.2e-13 Score=91.40 Aligned_cols=83 Identities=11% Similarity=0.103 Sum_probs=65.9
Q ss_pred EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCch
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAA 170 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 170 (225)
+.++.||++||++|+...|.++++.++++++ +.++.|++|. +. ...
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~-------~~--------------------------~~~ 48 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK-IDVEKIDIMV-------DR--------------------------EKA 48 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS-CCEEEECTTT-------CG--------------------------GGG
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH--------------------------HHH
Confidence 4688999999999999999999999999754 8999998763 11 011
Q ss_pred hhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 171 PLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
+.| ++.++|++++ +|++ ++.|..+.+++.+.|+++++
T Consensus 49 ~~~-------------~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 49 IEY-------------GLMAVPAIAI---NGVV--RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp GGT-------------CSSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHCC
T ss_pred HhC-------------CceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHhC
Confidence 112 7888999887 8998 67777788999999998864
No 189
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.45 E-value=1.6e-13 Score=90.84 Aligned_cols=83 Identities=10% Similarity=0.131 Sum_probs=66.7
Q ss_pred CEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCc
Q 027311 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNA 169 (225)
Q Consensus 90 k~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 169 (225)
.++++.||++||++|+...|.++++.+++++ ++.++.|++|+ +. ..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~--------------------------~~ 48 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------NP--------------------------QK 48 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------SC--------------------------CT
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------CH--------------------------HH
Confidence 5789999999999999999999999999974 49999998763 10 01
Q ss_pred hhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 170 APLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.+.| ++.++|++++ +|++ ++.|..+.+++.+.|+++|
T Consensus 49 ~~~~-------------~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 49 AMEY-------------GIMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp TTST-------------TTCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred HHHC-------------CCcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 1112 7888999877 8987 7888888899999998865
No 190
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.42 E-value=6e-14 Score=100.51 Aligned_cols=89 Identities=17% Similarity=0.212 Sum_probs=70.7
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
.+||+++|.||++||++|+...|.++++.++++ ++.++.|++|. ..+
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~------------------------ 80 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------LKE------------------------ 80 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------SGG------------------------
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------hHH------------------------
Confidence 368999999999999999999999999999986 48888887762 111
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
..+.| ++.++|+++++ ++|+++.++.| .+.+++.+.|+++++
T Consensus 81 --~~~~~-------------~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 81 --VAEKY-------------NVEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVG 122 (130)
T ss_dssp --GHHHH-------------TCCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTS
T ss_pred --HHHHc-------------CCCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHh
Confidence 11123 77788986666 89999988888 477899999988763
No 191
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.41 E-value=9.2e-14 Score=102.72 Aligned_cols=77 Identities=12% Similarity=0.094 Sum_probs=54.0
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHH--HHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYD--KYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~--~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
..||+|+|+|||+||++|+...|.+.+..+ ++.+ ..++.|.+|+ + ..+
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~----e--~~~---------------------- 91 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMH----E--TTD---------------------- 91 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESS----C--CSC----------------------
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecC----C--chh----------------------
Confidence 369999999999999999999998886422 2222 2345555542 0 000
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~ 210 (225)
....| ++.++|+++++|++|+++.+..|.
T Consensus 92 ----~~~~~-------------~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 92 ----KNLSP-------------DGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp ----GGGCT-------------TCCCSSEEEEECTTSCBCTTCCCS
T ss_pred ----hHhhc-------------CCCCCCEEEEECCCCCEEEEEeCC
Confidence 00011 667789999999999999999887
No 192
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.40 E-value=4.9e-13 Score=100.84 Aligned_cols=105 Identities=5% Similarity=-0.049 Sum_probs=67.9
Q ss_pred CeecCCccCCCEEEEEEcccCCCCChHhHHH---HHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCc
Q 027311 80 QDVDLSIYKGKLLLIVNVASQCGLTNSNYTE---LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEF 156 (225)
Q Consensus 80 ~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~---l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (225)
+.+.....+||+|+|+||++||++|+...+. ..++.+.+.+ ++.++.|..|+ .++-...|. +.
T Consensus 30 ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de-------~~~l~~~y~-~~----- 95 (173)
T 3ira_A 30 EAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREE-------RPDIDNIYM-TV----- 95 (173)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTT-------CHHHHHHHH-HH-----
T ss_pred HHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcc-------cCcHHHHHH-HH-----
Confidence 3445555679999999999999999997773 2456666654 37888887663 333223332 10
Q ss_pred ceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC-----CCChhhHHHHHHhh
Q 027311 157 PIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP-----TTSPLSIEVVLECL 223 (225)
Q Consensus 157 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g-----~~~~~~l~~~l~~l 223 (225)
.+.++ ++.++|+++++|++|++++.... ....+.+.+.|+++
T Consensus 96 ------------~q~~~-------------gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v 142 (173)
T 3ira_A 96 ------------CQIIL-------------GRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRI 142 (173)
T ss_dssp ------------HHHHH-------------SCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHH
T ss_pred ------------HHHHc-------------CCCCCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHH
Confidence 11122 78889999999999999987321 11223465555554
No 193
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.40 E-value=5.2e-13 Score=96.81 Aligned_cols=84 Identities=15% Similarity=0.085 Sum_probs=67.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+||++||+||++||++|+...|.+.++.+++. ++.++.|++|. ..
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~-------~~-------------------------- 73 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNS-------CI-------------------------- 73 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSS-------SC--------------------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhc-------Cc--------------------------
Confidence 46899999999999999999999999999985 48888888763 00
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC-------ChhhHHHHHHhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-------SPLSIEVVLECL 223 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~-------~~~~l~~~l~~l 223 (225)
..| ++.++|++++++ +|+++.++.|.. +.+++++.|++.
T Consensus 74 ---~~~-------------~i~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 74 ---EHY-------------HDNCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ---SSC-------------CSSCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred ---ccC-------------CCCCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 012 788899999885 999999988865 567777777654
No 194
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.40 E-value=1.8e-12 Score=101.60 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=72.2
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc---CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN---QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~---~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
.+++++|.||++||++|+.+.|.++++++++++ .++.++.|++|. . .++ . +
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------~-~~l---~-~-------------- 186 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------Y-PEW---A-D-------------- 186 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------C-HHH---H-H--------------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------C-HHH---H-H--------------
Confidence 344559999999999999999999999999983 359999998762 1 111 1 1
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|+.+.++.|..+.+++.+.|++++.
T Consensus 187 -------~~-------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 187 -------QY-------------NVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp -------HT-------------TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -------hC-------------CCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhhC
Confidence 12 78889996666 799999999999999999999988763
No 195
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.39 E-value=3.7e-13 Score=98.54 Aligned_cols=88 Identities=6% Similarity=0.091 Sum_probs=62.5
Q ss_pred CCEEEEEEcccC--CCCChHhHHHHHHHHHHHhcCCeE--EEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 89 GKLLLIVNVASQ--CGLTNSNYTELSQLYDKYKNQGLE--ILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 89 gk~vlv~F~~tw--C~~C~~~~~~l~~l~~~~~~~~~~--iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
++.+||+||++| |++|+...|.++++.++| + ++. ++.|++|. . .+.+ +
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~--------~---~~la-~-------------- 85 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQ--------S---EAIG-D-------------- 85 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHH--------H---HHHH-H--------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCC--------C---HHHH-H--------------
Confidence 345777899887 999999999999999999 4 377 88887651 1 1111 1
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| +|.++|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 86 -------~~-------------~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 86 -------RF-------------NVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp -------TT-------------TCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC
T ss_pred -------hc-------------CCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 12 88889999999 999999999999888999999988763
No 196
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.35 E-value=2e-12 Score=113.46 Aligned_cols=107 Identities=12% Similarity=0.123 Sum_probs=81.0
Q ss_pred EeCCCCCeecCCcc-CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc--CCeEEEEEecCCCCCCCCCCHHHHHHHHHh
Q 027311 74 VKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNEQIQEFACT 150 (225)
Q Consensus 74 l~~~~G~~~~l~~~-~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~--~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~ 150 (225)
+..++++.+...-. .||+++|+|||+||++|+.++|.++++++++++ .++.++.|++|. +...+ .+ +
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~------d~~~~---l~-~ 83 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE------ETNSA---VC-R 83 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS------GGGHH---HH-H
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc------cccHH---HH-H
Confidence 33444544433222 368999999999999999999999999999986 359999999862 01111 11 1
Q ss_pred hcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECC---CCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 151 RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK---EGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~---~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| +|.++|+++++++ +|+++..+.|..+.+++.+.|++++
T Consensus 84 ---------------------~~-------------~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 84 ---------------------EF-------------NIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDAL 126 (519)
T ss_dssp ---------------------HT-------------TCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred ---------------------Hc-------------CCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHH
Confidence 12 7888999999998 8888888888888999999998876
No 197
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.33 E-value=4.3e-12 Score=100.89 Aligned_cols=91 Identities=16% Similarity=0.110 Sum_probs=69.2
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc--CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~--~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
.+++++|.||++||++|+...|.++++++++++ .++.++.|+++. +...++ + +
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------~~~~~l---~-~--------------- 83 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE------ETNSAV---C-R--------------- 83 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS------TTTHHH---H-H---------------
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc------hhhHHH---H-H---------------
Confidence 468999999999999999999999999999986 359999999852 011111 1 1
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCC-----CcEEEEcCCCCChhhHHHHHHhhh
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-----GNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~-----G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| +|.++|+++++++. |..+ ++.| .+.+++.+.|.+++
T Consensus 84 ------~~-------------~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 84 ------DF-------------NIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDAL 126 (244)
T ss_dssp ------HT-------------TCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHH
T ss_pred ------Hc-------------CCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHH
Confidence 12 78889999999872 4444 5555 57888888888765
No 198
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.33 E-value=1.1e-11 Score=98.59 Aligned_cols=110 Identities=10% Similarity=0.076 Sum_probs=79.1
Q ss_pred CCCceecCeE--EeCCCCCeecCC--------ccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc---CCeEEEEEec
Q 027311 64 QSKTSVHDFS--VKDAKGQDVDLS--------IYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN---QGLEILAFPC 130 (225)
Q Consensus 64 ~~g~~~p~f~--l~~~~G~~~~l~--------~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~---~~~~iv~Is~ 130 (225)
..+..+++|. +.+..|....++ +++|+++++.||++||++|+...|.++++..++++ .++.+..|.+
T Consensus 103 ~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~ 182 (243)
T 2hls_A 103 PAGEEIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEA 182 (243)
T ss_dssp CCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEET
T ss_pred CcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEEC
Confidence 3455555552 223345555555 35788999999999999999999999999999842 4688888887
Q ss_pred CCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCC
Q 027311 131 NQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~ 210 (225)
+. .. ++ + + .| +|.++|++++ +|+++ +.|.
T Consensus 183 ~~-------~~-~~---~-~---------------------~~-------------~V~~vPt~~i---~G~~~--~~G~ 211 (243)
T 2hls_A 183 YE-------NP-DI---A-D---------------------KY-------------GVMSVPSIAI---NGYLV--FVGV 211 (243)
T ss_dssp TT-------CH-HH---H-H---------------------HT-------------TCCSSSEEEE---TTEEE--EESC
T ss_pred cc-------CH-HH---H-H---------------------Hc-------------CCeeeCeEEE---CCEEE--EeCC
Confidence 63 11 11 1 1 12 7778899888 78875 6788
Q ss_pred CChhhHHHHHHhhh
Q 027311 211 TSPLSIEVVLECLC 224 (225)
Q Consensus 211 ~~~~~l~~~l~~ll 224 (225)
.+.+++.+.|++.+
T Consensus 212 ~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 212 PYEEDFLDYVKSAA 225 (243)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 88889999988765
No 199
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.32 E-value=3.4e-12 Score=90.41 Aligned_cols=82 Identities=16% Similarity=0.094 Sum_probs=66.3
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCC
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDN 168 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 168 (225)
++++||+||++||++|+...|.|+++.++|++ +.++.|++|. . . +
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~-------~-------~-~------------------ 67 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNS-------C-------I-Q------------------ 67 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGG-------T-------S-T------------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHH-------h-------H-H------------------
Confidence 45999999999999999999999999999863 8999998762 0 0 0
Q ss_pred chhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC-------ChhhHHHHHHh
Q 027311 169 AAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-------SPLSIEVVLEC 222 (225)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~-------~~~~l~~~l~~ 222 (225)
.| ++.++|+.+++ ++|+.+.+..|.. +.++++..|.+
T Consensus 68 ---~~-------------~v~~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 68 ---HY-------------HDNCLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp ---TC-------------CGGGCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred ---HC-------------CCCCCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 12 78889998888 8999999988754 46677777765
No 200
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.27 E-value=3.5e-11 Score=78.02 Aligned_cols=74 Identities=9% Similarity=-0.019 Sum_probs=55.1
Q ss_pred EEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchh
Q 027311 92 LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAP 171 (225)
Q Consensus 92 vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 171 (225)
..|+||++||++|+...|.++++.++++.+ +.++.|+ + .+ .. +
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~-~----------~~---~~-~--------------------- 44 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID-AEFEKIK-E----------MD---QI-L--------------------- 44 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC-EEEEEEC-S----------HH---HH-H---------------------
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc-eEEEEec-C----------HH---HH-H---------------------
Confidence 358899999999999999999999998754 8887774 1 11 11 1
Q ss_pred hhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC-ChhhHHHHH
Q 027311 172 LYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT-SPLSIEVVL 220 (225)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~-~~~~l~~~l 220 (225)
.| ++.++|++++ +|+++.+ |.. +.+++.+.|
T Consensus 45 ~~-------------~v~~~Pt~~~---~G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 45 EA-------------GLTALPGLAV---DGELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp HH-------------TCSSSSCEEE---TTEEEEC--SSCCCHHHHHHHC
T ss_pred HC-------------CCCcCCEEEE---CCEEEEc--CCCCCHHHHHHHh
Confidence 12 7788899877 8998877 665 677776653
No 201
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.26 E-value=5.6e-12 Score=89.72 Aligned_cols=95 Identities=9% Similarity=0.043 Sum_probs=66.4
Q ss_pred ccCCCEEEEEEccc-------CCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcce
Q 027311 86 IYKGKLLLIVNVAS-------QCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPI 158 (225)
Q Consensus 86 ~~~gk~vlv~F~~t-------wC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (225)
+.+||+++|.||++ ||++|+...|.++++.+++++ ++.++.|++++ ... +.
T Consensus 21 ~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~--------~~~---~~---------- 78 (123)
T 1wou_A 21 QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGE--------KPY---WK---------- 78 (123)
T ss_dssp TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCC--------HHH---HH----------
T ss_pred HhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCC--------chh---hh----------
Confidence 34589999999999 999999999999999998875 49999999862 211 10
Q ss_pred eeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 159 FDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 159 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
|.. ......| ++.++|+++++++.+++. ...+ .+++++++.|++
T Consensus 79 ----d~~-~~~~~~~-------------~i~~~Pt~~~~~~~~~~~-g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 79 ----DPN-NDFRKNL-------------KVTAVPTLLKYGTPQKLV-ESEC-LQANLVEMLFSE 122 (123)
T ss_dssp ----CTT-CHHHHHH-------------CCCSSSEEEETTSSCEEE-GGGG-GCHHHHHHHHHC
T ss_pred ----chh-HHHHHHC-------------CCCeeCEEEEEcCCceEe-cccc-CCHHHHHHHHhc
Confidence 111 1122223 889999999998844443 3333 456677776653
No 202
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.26 E-value=1.3e-11 Score=85.66 Aligned_cols=86 Identities=9% Similarity=0.259 Sum_probs=66.6
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCC
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDN 168 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 168 (225)
+++++|+|+++||++|+...|.++++.++ .++.++-|.+| ....+...+.++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVd--------e~r~~Sn~IA~~----------------- 75 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQ--------QERDLSDYIAKK----------------- 75 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGG--------GGHHHHHHHHHH-----------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEee--------cCchhhHHHHHH-----------------
Confidence 78999999999999999999999999884 34888888887 334443333222
Q ss_pred chhhhhhccccCCCCCCCcccc-ceeEEEECCCCcEEEE-cCCCCChhhHHHHH
Q 027311 169 AAPLYKHLKSSKGGLFGDSIKW-NFSKFLVDKEGNVVER-YAPTTSPLSIEVVL 220 (225)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~-~P~~~lid~~G~I~~~-~~g~~~~~~l~~~l 220 (225)
| +|.+ .|+.+++ ++|++++. .++..+.+.+++.|
T Consensus 76 ----~-------------~V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 76 ----T-------------NVKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp ----H-------------TCCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred ----h-------------CCccCCCeEEEE-ECCEEEEEeeccccCHHHHHHhh
Confidence 2 7885 8999999 99999998 55667777777654
No 203
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.26 E-value=9.8e-12 Score=105.27 Aligned_cols=104 Identities=17% Similarity=0.239 Sum_probs=77.2
Q ss_pred EeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhc-----CCeEEEEEecCCCCCCCCCCHHHHHHHH
Q 027311 74 VKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-----QGLEILAFPCNQFGAQEPGDNEQIQEFA 148 (225)
Q Consensus 74 l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~-----~~~~iv~Is~d~~~~~~~~~~~~~~~~~ 148 (225)
+.+++++.+...--++++++|.||++||++|+...|.++++.+++++ .++.++.|++|. . .++ +
T Consensus 7 v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~-------~-~~l---~ 75 (382)
T 2r2j_A 7 ITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ-------H-SDI---A 75 (382)
T ss_dssp -CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT-------C-HHH---H
T ss_pred eEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc-------c-HHH---H
Confidence 34455554442212578999999999999999999999999999953 248899998763 1 111 1
Q ss_pred HhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEE-cCCCCChhhHHHHHHhhh
Q 027311 149 CTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVER-YAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 149 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~-~~g~~~~~~l~~~l~~ll 224 (225)
++ | +|.++|+++++ ++|+++.+ +.|..+.+.+.+.|.+.+
T Consensus 76 -~~---------------------~-------------~v~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~ 116 (382)
T 2r2j_A 76 -QR---------------------Y-------------RISKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQK 116 (382)
T ss_dssp -HH---------------------T-------------TCCEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHH
T ss_pred -Hh---------------------c-------------CCCcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhc
Confidence 11 2 77888998877 68998874 889888999999988765
No 204
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.25 E-value=2.7e-12 Score=90.19 Aligned_cols=92 Identities=11% Similarity=0.030 Sum_probs=63.1
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHH-hcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKY-KNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~-~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
+...+||+||++||++|+..-+.+...++.. ..+.+.++.|.++. +. .
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~-------~~------------------------~ 65 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD-------PL------------------------P 65 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS-------CC------------------------C
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC-------CC------------------------c
Confidence 4568999999999999997765444332211 01125666676653 00 0
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
......| +|.++||+++++ +|+.+.+..|..+++++.+.|++++
T Consensus 66 ~~la~~~-------------~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 66 PGLELAR-------------PVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp TTCBCSS-------------CCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHH
T ss_pred hhHHHHC-------------CCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHH
Confidence 0011112 788899999998 9999999999999999999998875
No 205
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.25 E-value=2.5e-11 Score=99.45 Aligned_cols=92 Identities=12% Similarity=0.142 Sum_probs=71.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.+++++|.||++||++|+.+.|.+.++.+++++. +.++.|++|.. ...+ .+ ++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~------~~~~---l~-~~---------------- 86 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLN------KNKA---LC-AK---------------- 86 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTST------TTHH---HH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCc------cCHH---HH-Hh----------------
Confidence 4789999999999999999999999999999865 99999998730 1111 11 11
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCC----------------cEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEG----------------NVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G----------------~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +|.++|+++++++.+ .....+.|..+.+.+.+.+.+.+
T Consensus 87 -----~-------------~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 87 -----Y-------------DVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp -----T-------------TCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred -----C-------------CCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 2 778889999997643 14567888888888988887654
No 206
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.25 E-value=1.9e-11 Score=96.47 Aligned_cols=89 Identities=10% Similarity=0.176 Sum_probs=71.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCC--eEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQG--LEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVN 165 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~--~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 165 (225)
.+++++|.||++||++|+...|.+.++.+++++++ +.++.|..+. . .++. ++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~-------~-~~l~----~~-------------- 199 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA-------E-TDLA----KR-------------- 199 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-------C-HHHH----HH--------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-------C-HHHH----HH--------------
Confidence 57899999999999999999999999999998654 8888888763 2 2211 11
Q ss_pred CCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 166 GDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +|.++|++++++ +|+.+. +.|..+.+++.+.|++.+
T Consensus 200 -------~-------------~v~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 200 -------F-------------DVSGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp -------T-------------TCCSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHT
T ss_pred -------c-------------CCcccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhh
Confidence 2 777889988885 588776 788888999999988764
No 207
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.24 E-value=1.2e-11 Score=107.53 Aligned_cols=102 Identities=13% Similarity=0.152 Sum_probs=77.5
Q ss_pred CCCCCeecCCcc-CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcC-CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 76 DAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 76 ~~~G~~~~l~~~-~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~-~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
..+|+.+..... .||+++|.||++||++|+.++|.+.++.+++++. ++.++.|..+. + .
T Consensus 356 ~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~-------~------------~ 416 (481)
T 3f8u_A 356 VVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-------N------------D 416 (481)
T ss_dssp EECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS-------S------------C
T ss_pred EecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc-------h------------h
Confidence 345554432222 4899999999999999999999999999999875 68888887652 0 0
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcE-EEEcCCCCChhhHHHHHHhhh
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV-VERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I-~~~~~g~~~~~~l~~~l~~ll 224 (225)
....| ++.++|+++++++.|++ +.++.|..+.+++.+.|++.+
T Consensus 417 ---------------~~~~~-------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 460 (481)
T 3f8u_A 417 ---------------VPSPY-------------EVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA 460 (481)
T ss_dssp ---------------CCTTC-------------CCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHC
T ss_pred ---------------hHhhC-------------CCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhc
Confidence 00112 78889999999988874 567888888999999888754
No 208
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.23 E-value=4.3e-11 Score=100.09 Aligned_cols=88 Identities=9% Similarity=0.076 Sum_probs=70.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHH-------HHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceee
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTE-------LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFD 160 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~-------l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (225)
++++++|.|||+||+ |+..+|. ++++.+++++.++.++.|++|. . .++. +
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~-------~-~~l~----~---------- 83 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK-------E-AKLA----K---------- 83 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT-------T-HHHH----H----------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC-------C-HHHH----H----------
Confidence 478999999999999 9988898 8899999987679999999873 2 2211 1
Q ss_pred eecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 161 KVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 161 ~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| +|.++|+++++ ++|++ ..+.|..+.+.+.+.+++.+
T Consensus 84 -----------~~-------------~v~~~Pt~~~~-~~g~~-~~~~G~~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 84 -----------KL-------------GFDEEGSLYVL-KGDRT-IEFDGEFAADVLVEFLLDLI 121 (350)
T ss_dssp -----------HH-------------TCCSTTEEEEE-ETTEE-EEECSCCCHHHHHHHHHTTS
T ss_pred -----------hc-------------CCCccceEEEE-ECCcE-EEecCCCCHHHHHHHHHHhc
Confidence 12 77888999999 78884 57888888999999888764
No 209
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.23 E-value=2.4e-11 Score=96.65 Aligned_cols=85 Identities=12% Similarity=0.098 Sum_probs=64.7
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+|++|||+||++||++|+...|.+.+++++|++ +.++.|+++ + . . +
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d----------~--~----~-------l--------- 177 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKAS----------N--T----G-------A--------- 177 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHH----------H--H----C-------C---------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCC----------c--H----H-------H---------
Confidence 489999999999999999999999999999964 899988753 1 0 0 0
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCC-------hhhHHHHHHh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTS-------PLSIEVVLEC 222 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~-------~~~l~~~l~~ 222 (225)
...| ++.++|+++++ ++|+++.++.|... .+.++..|.+
T Consensus 178 --~~~~-------------~I~~~PTll~~-~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 178 --GDRF-------------SSDVLPTLLVY-KGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp --TTSS-------------CTTTCSEEEEE-ETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred --HHHC-------------CCCCCCEEEEE-ECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 0112 78889998877 59999999888532 2356666654
No 210
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.19 E-value=5.1e-13 Score=92.91 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=34.6
Q ss_pred CeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHh
Q 027311 80 QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYK 119 (225)
Q Consensus 80 ~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~ 119 (225)
..+++++..||++||.||++||++|+...|.++++.++++
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 4567778889999999999999999999999999886654
No 211
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.17 E-value=2.7e-11 Score=94.79 Aligned_cols=85 Identities=12% Similarity=0.120 Sum_probs=66.4
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+|+++||.||++||++|+...|.+.++.++|+ ++.++.|+++ . .. +
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-------------~----~~-------l-------- 164 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-------------N----TG-------A-------- 164 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-------------H----HT-------C--------
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-------------c----HH-------H--------
Confidence 46899999999999999999999999999985 4899888742 0 10 0
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCCh-------hhHHHHHHh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSP-------LSIEVVLEC 222 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~-------~~l~~~l~~ 222 (225)
...| ++.++|+++++ ++|+++.++.|..+. ++|+..|.+
T Consensus 165 --~~~~-------------~i~~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 165 --GDRF-------------SSDVLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp --STTS-------------CGGGCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred --HHHC-------------CCCCCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 0112 78889999888 599999999886654 677777765
No 212
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.17 E-value=4.3e-11 Score=104.80 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=73.8
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
++++++|.||++||++|+...|.+.++.+++++.++.++.|+++. . .+ .+ ++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~-------~-~~---l~-~~---------------- 81 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE-------N-QD---LC-ME---------------- 81 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT-------C-HH---HH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC-------C-HH---HH-Hh----------------
Confidence 588999999999999999999999999999987679999999873 2 11 11 21
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcE--EEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV--VERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I--~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +|.++|+++++. +|+. +..+.|..+.+.+.+.|.+.+
T Consensus 82 -----~-------------~v~~~Pt~~~~~-~g~~~~~~~~~G~~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 82 -----H-------------NIPGFPSLKIFK-NSDVNNSIDYEGPRTAEAIVQFMIKQS 121 (504)
T ss_dssp -----T-------------TCCSSSEEEEEE-TTCTTCEEECCSCCSHHHHHHHHHHHT
T ss_pred -----c-------------CCCcCCEEEEEe-CCccccceeecCCCCHHHHHHHHHHhc
Confidence 2 778889999984 5775 778899888999999988765
No 213
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.17 E-value=9.3e-11 Score=92.07 Aligned_cols=85 Identities=8% Similarity=0.059 Sum_probs=66.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.++++++.||++||++|+...|.++++..+++ ++.++.|++|. . .++ + +
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~-------~-~~l---~-~----------------- 183 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASE-------N-QDL---A-E----------------- 183 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG-------C-HHH---H-H-----------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC-------C-HHH---H-H-----------------
Confidence 35566889999999999999999999999983 59999998762 1 111 1 1
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|++++ +|+ +.++.|..+.+++.+.|++++
T Consensus 184 ----~~-------------~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 184 ----QF-------------QVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp ----HT-------------TCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHH
T ss_pred ----Hc-------------CCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHh
Confidence 12 7788899887 788 466888888888998888765
No 214
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.17 E-value=7.1e-11 Score=108.56 Aligned_cols=93 Identities=16% Similarity=0.170 Sum_probs=74.5
Q ss_pred CCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeec
Q 027311 84 LSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVD 163 (225)
Q Consensus 84 l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 163 (225)
+.+++|++++|.||++||++|+.++|.+++++++++++ +.++.|++|+ . .++. +
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~-~~~~----~------------- 503 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTI-------H-EGLC----N------------- 503 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------C-HHHH----H-------------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCC-------C-HHHH----H-------------
Confidence 34458999999999999999999999999999999864 9999998763 2 2111 1
Q ss_pred CCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 164 VNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
.| ++.++|+++++ ++|++ ..+.|..+.+++.+.++++++
T Consensus 504 --------~~-------------~v~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 504 --------MY-------------NIQAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp --------HT-------------TCCSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHHHHS
T ss_pred --------Hc-------------CCCcCCeEEEE-cCCce-eeecCcccHHHHHHHHHhhcc
Confidence 12 77778999999 55877 778888888999999988763
No 215
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.15 E-value=1.2e-10 Score=100.39 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=45.2
Q ss_pred EeCCCCCeec--CCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcC-------CeEEEEEecCC
Q 027311 74 VKDAKGQDVD--LSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-------GLEILAFPCNQ 132 (225)
Q Consensus 74 l~~~~G~~~~--l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~-------~~~iv~Is~d~ 132 (225)
+..++++.+. +..-++|++||+|||+||++|+.+.|.+.+++++++++ .+.++.|++|.
T Consensus 25 V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~ 92 (470)
T 3qcp_A 25 VVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS 92 (470)
T ss_dssp EEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT
T ss_pred cEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC
Confidence 3444444443 22234589999999999999999999999999999743 28999999873
No 216
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.15 E-value=8.7e-11 Score=102.18 Aligned_cols=89 Identities=16% Similarity=0.234 Sum_probs=73.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+|++++|.||++||++|+...|.+.++.+++++. +.++.|+++. ..++ + ++
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~--------~~~l---~-~~---------------- 70 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA--------NTNT---C-NK---------------- 70 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT--------CHHH---H-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC--------CHHH---H-Hh----------------
Confidence 3589999999999999999999999999999877 8899998773 1221 1 11
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +|.++|+.+++ ++|+++.++.|..+.+.+.+.+.+.+
T Consensus 71 -----~-------------~v~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~ 108 (481)
T 3f8u_A 71 -----Y-------------GVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQA 108 (481)
T ss_dssp -----T-------------TCCEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHT
T ss_pred -----c-------------CCCCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhc
Confidence 2 78888988877 78988899999999999999988765
No 217
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.12 E-value=6.6e-10 Score=82.06 Aligned_cols=91 Identities=10% Similarity=0.032 Sum_probs=65.8
Q ss_pred CCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
+||+++|+|+++||..|+..-... .++.+.+.+ ++.++.+.+| +. +-.++. +
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~--------~~-~~~~l~-~-------------- 95 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHD--------SE-EGQRYI-Q-------------- 95 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESS--------SH-HHHHHH-H--------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecC--------CH-hHHHHH-H--------------
Confidence 589999999999999999765544 345554443 4888888765 22 222332 2
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCC-CcEEEEcCCCCChhhHHHHHHhhh
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-GNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~-G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.| ++.++|+++++|++ |+.+....| .+++++.+.|++.+
T Consensus 96 -------~y-------------~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 96 -------FY-------------KLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp -------HH-------------TCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred -------Hc-------------CCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 23 66778999999999 877777666 78999998888765
No 218
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.10 E-value=1.8e-10 Score=96.57 Aligned_cols=88 Identities=14% Similarity=0.119 Sum_probs=69.9
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcC-CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNG 166 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~-~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 166 (225)
++|+++|.||++||++|+...|.+.++.++++++ ++.++.|..+. +.
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~-------~~------------------------- 313 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA-------NE------------------------- 313 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT-------CB-------------------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc-------cc-------------------------
Confidence 5899999999999999999999999999999865 57777776542 00
Q ss_pred CCchhhhhhccccCCCCCCCccccceeEEEECCC-CcEEEEcCCCCChhhHHHHHHhh
Q 027311 167 DNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKE-GNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~-G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
. ..| +|.++|++++++++ |+...++.|..+.+++.+.|++-
T Consensus 314 --~-~~~-------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 314 --V-EAV-------------KVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp --C-SSC-------------CCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred --h-hhc-------------CCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 0 012 78889999999655 67778899988888888888753
No 219
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.10 E-value=7.8e-11 Score=103.13 Aligned_cols=102 Identities=19% Similarity=0.135 Sum_probs=74.8
Q ss_pred EeCCCCCeecCCcc-CCCEEEEEEcccCCCCChHhHHHHHHHHHHHh-c-CCeEEEEEecCCCCCCCCCCHHHHHHHHHh
Q 027311 74 VKDAKGQDVDLSIY-KGKLLLIVNVASQCGLTNSNYTELSQLYDKYK-N-QGLEILAFPCNQFGAQEPGDNEQIQEFACT 150 (225)
Q Consensus 74 l~~~~G~~~~l~~~-~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~-~-~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~ 150 (225)
+..++|+.+...-. .||++||.||++||++|+...|.+.++.++++ . .++.++.|..+.
T Consensus 360 v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------------------ 421 (504)
T 2b5e_A 360 VFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE------------------ 421 (504)
T ss_dssp EEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG------------------
T ss_pred ceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc------------------
Confidence 44445555443222 58999999999999999999999999999997 3 247777776431
Q ss_pred hcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcE--EEEcCCCCChhhHHHHHHhhh
Q 027311 151 RFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNV--VERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I--~~~~~g~~~~~~l~~~l~~ll 224 (225)
. + ... | ++.++||++++ ++|+. +.++.|..+.+++.+.|++.+
T Consensus 422 ~-----------~-----~~~-~-------------~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~ 466 (504)
T 2b5e_A 422 N-----------D-----VRG-V-------------VIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENG 466 (504)
T ss_dssp C-----------C-----CSS-C-------------CCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHC
T ss_pred c-----------c-----ccc-C-------------CceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcC
Confidence 0 0 001 2 78889999888 78876 667888888889999888764
No 220
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.07 E-value=8e-11 Score=108.20 Aligned_cols=89 Identities=13% Similarity=0.024 Sum_probs=71.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.||+++|.||++||++|+...|.++++.++++++ +.++.|++|. . ..+ + ++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~-~~~~~vd~~~-------~-~~~---~-~~---------------- 724 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK-VRAGKVDCQA-------Y-PQT---C-QK---------------- 724 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------C-HHH---H-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-ceEEEEECCC-------C-HHH---H-Hh----------------
Confidence 5789999999999999999999999999999764 9999998763 2 111 1 11
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCC----CCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAP----TTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g----~~~~~~l~~~l~~ll 224 (225)
| +|.++|+++++ ++|+++.++.| ..+.+++.+.|++++
T Consensus 725 -----~-------------~v~~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l 766 (780)
T 3apo_A 725 -----A-------------GIKAYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKL 766 (780)
T ss_dssp -----T-------------TCCSSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHT
T ss_pred -----c-------------CCCcCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHH
Confidence 2 77788999999 88988766665 467889999998876
No 221
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.00 E-value=3.2e-10 Score=85.33 Aligned_cols=50 Identities=14% Similarity=0.146 Sum_probs=39.8
Q ss_pred CCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEec
Q 027311 79 GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPC 130 (225)
Q Consensus 79 G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~ 130 (225)
+....+.+-.+|++|+.||..|||+|....+.+.++.+++++ ++++.+.+
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~ 61 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREW 61 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEEC
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeC
Confidence 344455566789999999999999999999999999998865 55555443
No 222
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.99 E-value=1.7e-09 Score=81.55 Aligned_cols=45 Identities=11% Similarity=0.122 Sum_probs=38.5
Q ss_pred CCCEEEEEEcc-------cCCCCChHhHHHHHHHHHHHhc----CCeEEEEEecCC
Q 027311 88 KGKLLLIVNVA-------SQCGLTNSNYTELSQLYDKYKN----QGLEILAFPCNQ 132 (225)
Q Consensus 88 ~gk~vlv~F~~-------twC~~C~~~~~~l~~l~~~~~~----~~~~iv~Is~d~ 132 (225)
++.++||+||| .||++|+...|.++++.++|.. ..+.+..|.+|+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~ 91 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE 91 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc
Confidence 46689999999 4999999999999999999971 238899898873
No 223
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.98 E-value=4.1e-09 Score=88.69 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=68.2
Q ss_pred CCCEEEEEEcccCCCCChHhH------HHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeee
Q 027311 88 KGKLLLIVNVASQCGLTNSNY------TELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDK 161 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~------~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (225)
++++++|.|||+||++|...- |.++++.+++++.++.+..|.++. ..++. ++
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~--------~~~l~----~~---------- 86 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK--------DAAVA----KK---------- 86 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--------THHHH----HH----------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc--------cHHHH----HH----------
Confidence 478999999999999984322 578888888887679999998873 22221 21
Q ss_pred ecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 162 VDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +|.++||++++. +|+++ .+.|..+.+.+.+.|.+.+
T Consensus 87 -----------~-------------~V~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~~~~ 123 (367)
T 3us3_A 87 -----------L-------------GLTEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLLDVL 123 (367)
T ss_dssp -----------H-------------TCCSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHHHHH
T ss_pred -----------c-------------CCCcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHHHhc
Confidence 2 788899999984 78875 7888888999999887754
No 224
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.96 E-value=9e-10 Score=84.39 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=39.3
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.|+++|+.||..|||+|....+.+.++.+++++ ++.+..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 589999999999999999999999999999987 4888888876
No 225
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.93 E-value=4.5e-10 Score=87.73 Aligned_cols=45 Identities=11% Similarity=0.197 Sum_probs=36.1
Q ss_pred ecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEec
Q 027311 82 VDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPC 130 (225)
Q Consensus 82 ~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~ 130 (225)
+.+...+||++|+.||++|||+|+...+.++++.++ +++++.+..
T Consensus 79 ~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~ 123 (216)
T 1eej_A 79 IVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAF 123 (216)
T ss_dssp EEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred eeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 344455789999999999999999999999988652 577776654
No 226
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.92 E-value=1.4e-09 Score=78.37 Aligned_cols=88 Identities=7% Similarity=-0.004 Sum_probs=68.1
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.+++++|+||++ |++|+...|.++++.++|+++ +.++.|++|+ ..+ +
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~-------~~~-~----------------------- 68 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA-------FGA-H----------------------- 68 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT-------TGG-G-----------------------
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH-------hHH-H-----------------------
Confidence 367899999999 899999999999999999876 8999888763 111 0
Q ss_pred CchhhhhhccccCCCCCCCcccc--ceeEEEECC-CCcEEEEcC--CCCChhhHHHHHHhhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKW--NFSKFLVDK-EGNVVERYA--PTTSPLSIEVVLECLC 224 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~--~P~~~lid~-~G~I~~~~~--g~~~~~~l~~~l~~ll 224 (225)
...| ++.+ +|+.++++. +|+. ++.. |..+.+.+++.|++++
T Consensus 69 --a~~~-------------gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 69 --AGNL-------------NLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp --TTTT-------------TCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHH
T ss_pred --HHHc-------------CCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHH
Confidence 0112 6666 899999874 5776 5655 8888899999998876
No 227
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.90 E-value=5.2e-10 Score=78.35 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=55.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
+++++++ ||++|||+|+...+.|+++..+ +.++.|..+. ...+....+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~-------~~~~~~~~l------------------- 65 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELS-------DGSQLQSAL------------------- 65 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGST-------THHHHHHHH-------------------
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCC-------ChHHHHHHH-------------------
Confidence 4566666 9999999999999988887432 4555554432 222222222
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC---ChhhHHHHHHhh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT---SPLSIEVVLECL 223 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~---~~~~l~~~l~~l 223 (225)
...| ++.++|++ ++ +|+++..+.|.. +.+++.+.|+++
T Consensus 66 --~~~~-------------~v~~~Pt~-~~--~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 66 --AHWT-------------GRGTVPNV-FI--GGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp --HHHH-------------SCCSSCEE-EE--TTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred --HHHh-------------CCCCcCEE-EE--CCEEECChHHHHHHHhCChHHHHHHHc
Confidence 1112 67778998 44 688888766544 556777777653
No 228
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.83 E-value=4.6e-09 Score=69.99 Aligned_cols=74 Identities=12% Similarity=0.138 Sum_probs=52.3
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhh
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPL 172 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 172 (225)
|+.||++||++|....+.|+++..++ +..|++|+ +++ +. ++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~-------~~~-l~----~~--------------------- 43 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDD-------DAA-LE----SA--------------------- 43 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTT-------CHH-HH----HH---------------------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCC-------CHH-HH----HH---------------------
Confidence 67899999999998888887765432 45577763 322 21 22
Q ss_pred hhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 173 YKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +++ +|++++ .+|+.+. |..+.+++++.|++.+
T Consensus 44 ~-------------g~~-vPtl~~--~~G~~v~---g~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 44 Y-------------GLR-VPVLRD--PMGRELD---WPFDAPRLRAWLDAAP 76 (87)
T ss_dssp H-------------TTT-CSEEEC--TTCCEEE---SCCCHHHHHHHHHTCC
T ss_pred h-------------CCC-cCeEEE--ECCEEEe---CCCCHHHHHHHHHHHH
Confidence 2 455 788666 7799875 7778889999988764
No 229
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.83 E-value=1.7e-09 Score=82.63 Aligned_cols=43 Identities=12% Similarity=0.155 Sum_probs=38.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.|+++|+.||..|||+|....+.+.++.+++++ ++.+.-+++.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehh
Confidence 589999999999999999999999999999987 4888877764
No 230
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.78 E-value=9.9e-09 Score=78.43 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=38.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.|+++|+.||..|||+|....+.+.++.++++. ++.+..+++.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccc
Confidence 578999999999999999999999999999876 4888877764
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.75 E-value=4e-08 Score=76.65 Aligned_cols=92 Identities=20% Similarity=0.234 Sum_probs=63.5
Q ss_pred ccCCCEEEEEEccc-CCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 86 IYKGKLLLIVNVAS-QCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 86 ~~~gk~vlv~F~~t-wC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
..+++++++.||++ ||++|+...|.++++.+. . .++.++.|++| ..+. .+.+ ++
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~-~~v~~~~vd~~--------~~~~-~~~~-~~------------- 73 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T-DKLSYEIVDFD--------TPEG-KELA-KR------------- 73 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C-TTEEEEEEETT--------SHHH-HHHH-HH-------------
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C-CceEEEEEeCC--------Cccc-HHHH-HH-------------
Confidence 34567888999999 999999999999998864 3 34999988876 3111 2222 22
Q ss_pred CCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEE-EEcCCCCChhhHHHHHHhhh
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVV-ERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~-~~~~g~~~~~~l~~~l~~ll 224 (225)
| ++.++|+++++ ++|... .++.|..+.+++.+.+..++
T Consensus 74 --------~-------------~v~~~Pt~~~~-~~g~~~~~~~~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 74 --------Y-------------RIDRAPATTIT-QDGKDFGVRYFGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp --------T-------------TCCSSSEEEEE-ETTBCCSEEEESCCCTTHHHHHHHHHH
T ss_pred --------c-------------CCCcCceEEEE-cCCceeeEEEeccCcHHHHHHHHHHHH
Confidence 2 77778998888 556432 45666666677777766543
No 232
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.67 E-value=8.7e-08 Score=74.93 Aligned_cols=91 Identities=8% Similarity=0.145 Sum_probs=64.5
Q ss_pred cCCCEEEEEE----cccCCCCChHhHHHHHHHHHHHhc-CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeee
Q 027311 87 YKGKLLLIVN----VASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDK 161 (225)
Q Consensus 87 ~~gk~vlv~F----~~twC~~C~~~~~~l~~l~~~~~~-~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (225)
.++.++|+.| |++||++|+..+|.+.++++++.+ ..+.+..|..|. ..++. ++
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~--------~~~l~----~~---------- 76 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT--------HKEET----EK---------- 76 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT--------CHHHH----HH----------
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc--------cHHHH----HH----------
Confidence 3445666666 588999999999999999888843 348888887662 12221 21
Q ss_pred ecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 162 VDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
| +|.++|++++.+ +|....++.|..+.+++.+.+.+++
T Consensus 77 -----------~-------------~v~~~Ptl~~~~-~~~~~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 77 -----------Y-------------GVDRVPTIVIEG-DKDYGIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp -----------T-------------TCCBSSEEEEES-SSCCCEEEESCCCTTHHHHHHHHHH
T ss_pred -----------c-------------CCCcCcEEEEEC-CCcccceecCCccHHHHHHHHHHHH
Confidence 2 788889988885 5666667778777777777776653
No 233
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.66 E-value=3.5e-08 Score=68.17 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=33.2
Q ss_pred EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCC
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~ 132 (225)
..|+.||++||++|....+.|+++.++++ +.+.-|++|+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---i~~~~vDId~ 68 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW---FELEVINIDG 68 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC---CCCEEEETTT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC---CeEEEEECCC
Confidence 56888999999999999999999988863 7777788773
No 234
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.65 E-value=2e-07 Score=70.87 Aligned_cols=133 Identities=13% Similarity=0.101 Sum_probs=85.9
Q ss_pred ccccCCCceecC--e--EEeCCC---------C--CeecCCcc--CCCEEEEEEc-ccCCCCChH-hHHHHHHHHHHH-h
Q 027311 60 TMASQSKTSVHD--F--SVKDAK---------G--QDVDLSIY--KGKLLLIVNV-ASQCGLTNS-NYTELSQLYDKY-K 119 (225)
Q Consensus 60 ~~~~~~g~~~p~--f--~l~~~~---------G--~~~~l~~~--~gk~vlv~F~-~twC~~C~~-~~~~l~~l~~~~-~ 119 (225)
++...+|+++|. + +....+ | .++++++. +||.|||.+. +.+.|.|.. .+|.+.+.++++ +
T Consensus 23 ~~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k 102 (199)
T 4h86_A 23 SMSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVK 102 (199)
T ss_dssp CBCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHH
T ss_pred hhHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHH
Confidence 445578999995 3 333221 2 35667774 7987777654 889999986 699999988875 6
Q ss_pred cCCe-EEEEEecCCCCCCCCCCHHHHHHHHHhhcCC----CcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeE
Q 027311 120 NQGL-EILAFPCNQFGAQEPGDNEQIQEFACTRFKA----EFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSK 194 (225)
Q Consensus 120 ~~~~-~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~ 194 (225)
.+|+ +|+.||+| +.-.+.+|. +..+. .++.+ .|..+.. .+.++..... + .+ +.++.-..
T Consensus 103 ~kGvd~I~ciSVN--------D~FVm~AW~-k~~~~~~~~~i~~l--aD~~~ef-tkalGl~~~~-~--~g-g~RS~Rya 166 (199)
T 4h86_A 103 EKEVDQVIVVTVD--------NPFANQAWA-KSLGVKDTTHIKFA--SDPGCAF-TKSIGFELAV-G--DG-VYWSGRWA 166 (199)
T ss_dssp HSCCCEEEEEESS--------CHHHHHHHH-HHTTCCCCSSEEEE--ECGGGHH-HHHTTCEEEE-E--TT-EEEECSEE
T ss_pred hcCCcEEEEEEcC--------CHHHHHHHH-HHhccccccccccc--CCcchHH-HHhcCceeec-C--CC-cceeeEEE
Confidence 7777 79999998 788888887 54444 34555 3444332 2233322111 1 11 34455567
Q ss_pred EEECCCCcEEEEcCC
Q 027311 195 FLVDKEGNVVERYAP 209 (225)
Q Consensus 195 ~lid~~G~I~~~~~g 209 (225)
+||| ||+|.+.+..
T Consensus 167 ~IVd-DGvV~~~~vE 180 (199)
T 4h86_A 167 MVVE-NGIVTYAAKE 180 (199)
T ss_dssp EEEE-TTEEEEEEEC
T ss_pred EEEE-CCEEEEEEEe
Confidence 8998 9999988653
No 235
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.63 E-value=3.5e-08 Score=78.25 Aligned_cols=135 Identities=8% Similarity=0.084 Sum_probs=70.9
Q ss_pred ecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHH--------hhcC
Q 027311 82 VDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFAC--------TRFK 153 (225)
Q Consensus 82 ~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~--------~~~~ 153 (225)
+.+..-.+|++|+.|+..|||+|+...+.+.++.++ .++++..+.+.- -.+++.......+. +.+.
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~---~~~~s~~~a~a~~~a~d~~~~~~~~~ 163 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGV---IKPESPATAAAILASKDPAKTWQQYE 163 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCC---SSTTHHHHHHHHHHSSSHHHHHHHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEECCc---CCCcHHHHHHHHHHccCHHHHHHHHH
Confidence 334444678999999999999999999999887764 247776665431 11222222211110 1111
Q ss_pred CCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 154 AEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 154 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
..|.. ...+.........-..+.....-....++.++|++++.|.+|++ .+..|..+++++++.|++.+
T Consensus 164 ~~~~~-~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 164 ASGGK-LKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp HTTTC-CCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC--
T ss_pred HHhcc-CCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHH
Confidence 11100 00000000000000000000000001289999999999989976 46678888888988887654
No 236
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.60 E-value=2e-07 Score=81.90 Aligned_cols=82 Identities=10% Similarity=0.026 Sum_probs=62.8
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
.++..++.||++||++|+...|.++++..+++ ++.+..|.+|. . .++. ++
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~-------~-~~~~----~~---------------- 165 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT-------F-QNEI----TE---------------- 165 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT-------C-HHHH----HH----------------
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh-------h-HHHH----HH----------------
Confidence 46788999999999999999999999998876 48998888763 2 2221 21
Q ss_pred CchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 168 NAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
| ++.++|++++ +|+.+.. |..+.+++.+.|++
T Consensus 166 -----~-------------~i~svPt~~i---~g~~~~~--G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 166 -----R-------------NVMGVPAVFV---NGKEFGQ--GRMTLTEIVAKVDT 197 (521)
T ss_dssp -----T-------------TCCSSSEEEE---TTEEEEE--SCCCHHHHHHHHCC
T ss_pred -----h-------------CCCccCEEEE---CCEEEec--CCCCHHHHHHHHhh
Confidence 2 7778899877 8888765 77777888877654
No 237
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.55 E-value=9.2e-08 Score=74.24 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEec
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPC 130 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~ 130 (225)
.+|++|+.||..|||+|+...+.++++.+ .++++..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~~ 123 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LGITVRYLAF 123 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 57899999999999999999999988654 2466665543
No 238
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.53 E-value=1.3e-07 Score=71.89 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=37.4
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.|+++|+.||..+||+|....+.+.++.++++. ++++..+.+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPAV 66 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCcc
Confidence 578899999999999999999999999999875 4888777763
No 239
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.51 E-value=8.6e-08 Score=62.47 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=27.1
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
++.||++|||+|+...+.++++.++++ +.+..+.+|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK---YTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT---EEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC---CeEEEEEec
Confidence 566899999999999999998876553 444445544
No 240
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.50 E-value=8.3e-07 Score=70.47 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=65.0
Q ss_pred CCCEEEEEEc--ccCCCCChHhHHHHHHHHHHHhc--CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeec
Q 027311 88 KGKLLLIVNV--ASQCGLTNSNYTELSQLYDKYKN--QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVD 163 (225)
Q Consensus 88 ~gk~vlv~F~--~twC~~C~~~~~~l~~l~~~~~~--~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 163 (225)
.++++||.|| |+||+ ..|.+.++.+++++ .++.|..|++|+++.. ...++. ++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~---~n~~la----~~------------ 88 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGEL---ENKALG----DR------------ 88 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTC---TTHHHH----HH------------
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccc---ccHHHH----HH------------
Confidence 4679999999 99998 78999999999964 4599999988731100 012221 22
Q ss_pred CCCCCchhhhhhccccCCCCCCCccc--cceeEEEECCCCcE--EEEc--CCCCChhhHHHHHHhhh
Q 027311 164 VNGDNAAPLYKHLKSSKGGLFGDSIK--WNFSKFLVDKEGNV--VERY--APTTSPLSIEVVLECLC 224 (225)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~v~--~~P~~~lid~~G~I--~~~~--~g~~~~~~l~~~l~~ll 224 (225)
| +|. ++||++++- |++ ...+ .|..+.+.+.+.|++.+
T Consensus 89 ---------~-------------~V~~~~~PTl~~F~--G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 89 ---------Y-------------KVDDKNFPSIFLFK--GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp ---------T-------------TCCTTSCCEEEEES--SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred ---------h-------------CCCcCCCCeEEEEe--CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 2 777 889988885 773 4556 78888888988887653
No 241
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.45 E-value=9.6e-07 Score=66.08 Aligned_cols=50 Identities=10% Similarity=0.157 Sum_probs=39.9
Q ss_pred ecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcC-CeEEEEEecC
Q 027311 82 VDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCN 131 (225)
Q Consensus 82 ~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~-~~~iv~Is~d 131 (225)
+.+.+..++++|+.|+..+||+|....+.+.++.++|.+. +++++.....
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 3444557899999999999999999999999999998322 3888877654
No 242
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.45 E-value=2e-07 Score=63.59 Aligned_cols=38 Identities=11% Similarity=0.116 Sum_probs=29.9
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.+++|+.|+++||++|....+.|+++. +++.+.-|++|
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 457788899999999998888877653 23788888876
No 243
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.45 E-value=9.1e-07 Score=69.96 Aligned_cols=90 Identities=16% Similarity=0.220 Sum_probs=64.8
Q ss_pred CCCEEEEEEcc--cCCCCChHhHHHHHHHHHHHhc-CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecC
Q 027311 88 KGKLLLIVNVA--SQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDV 164 (225)
Q Consensus 88 ~gk~vlv~F~~--twC~~C~~~~~~l~~l~~~~~~-~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 164 (225)
.+++++|.||+ +||+ ..|.+.++.+++++ .++.+..|++|+++.. ...++ + ++
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~---~~~~l---~-~~------------- 76 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDK---LNMEL---S-EK------------- 76 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSC---CSHHH---H-HH-------------
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccch---hhHHH---H-HH-------------
Confidence 46799999999 9998 78999999999974 3589999987631100 11222 1 22
Q ss_pred CCCCchhhhhhccccCCCCCCCccc--cceeEEEECCCCc--EEEEcCCCCChhhHHHHHHhh
Q 027311 165 NGDNAAPLYKHLKSSKGGLFGDSIK--WNFSKFLVDKEGN--VVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~v~--~~P~~~lid~~G~--I~~~~~g~~~~~~l~~~l~~l 223 (225)
| +|. ++|+++++ ++|+ ....+.|..+.+.+.+.|++.
T Consensus 77 --------~-------------~V~~~~~PTl~~f-~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 77 --------Y-------------KLDKESYPVFYLF-RDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp --------T-------------TCCGGGCSEEEEE-ETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred --------c-------------CCCCCCCCEEEEE-eCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 2 777 78998888 6676 355788888888888888764
No 244
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.40 E-value=5.9e-07 Score=58.81 Aligned_cols=37 Identities=8% Similarity=0.034 Sum_probs=31.5
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
|+.|+++|||+|....+.|+++.++++ ++.+..++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 567999999999999999999988764 4888888765
No 245
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.35 E-value=2.7e-07 Score=70.55 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=38.9
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.++++|+.||..|||+|....+.+.++.++++++ +.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~-v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD-MYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTT-EEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCC-eEEEEecCC
Confidence 4789999999999999999999999999999874 888888876
No 246
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.12 E-value=6.7e-06 Score=65.03 Aligned_cols=43 Identities=9% Similarity=0.150 Sum_probs=34.7
Q ss_pred CCEEEEEEcccC--CCCChHhHHHHHHHHHHHhc-CC---eEEEEEecC
Q 027311 89 GKLLLIVNVASQ--CGLTNSNYTELSQLYDKYKN-QG---LEILAFPCN 131 (225)
Q Consensus 89 gk~vlv~F~~tw--C~~C~~~~~~l~~l~~~~~~-~~---~~iv~Is~d 131 (225)
+++++|.||+.| |++|....+.+.++.+++.. +| +.++.++.|
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 468999999999 99999999999999988532 22 777777765
No 247
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.12 E-value=1e-05 Score=67.45 Aligned_cols=90 Identities=9% Similarity=0.094 Sum_probs=62.3
Q ss_pred CEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCc
Q 027311 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNA 169 (225)
Q Consensus 90 k~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 169 (225)
++++|.|++.||+.|....+.++++.++++++ +.++.|..|. ++..+.+ +.+
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~---------~~~~~~~-~~f----------------- 187 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDH---------TDNQRIL-EFF----------------- 187 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTS---------GGGHHHH-HHT-----------------
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCCh---------HHHHHHH-HHc-----------------
Confidence 47788999999999999999999999999876 8888887651 0111122 221
Q ss_pred hhhhhhccccCCCCCCCcccc--ceeEEEECCCCcE-EEEc-CCCCChhhHHHHHHhhh
Q 027311 170 APLYKHLKSSKGGLFGDSIKW--NFSKFLVDKEGNV-VERY-APTTSPLSIEVVLECLC 224 (225)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~--~P~~~lid~~G~I-~~~~-~g~~~~~~l~~~l~~ll 224 (225)
++.. +|+..+++..+.. .+.. .+..+.+.+.+.++..+
T Consensus 188 -----------------gi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 188 -----------------GLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 229 (361)
T ss_dssp -----------------TCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHH
T ss_pred -----------------CCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHh
Confidence 4444 6888888774432 2222 26678888998888765
No 248
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.06 E-value=1.3e-06 Score=70.78 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=28.9
Q ss_pred eecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHH
Q 027311 81 DVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKY 118 (225)
Q Consensus 81 ~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~ 118 (225)
...+.+.-++..++.||++|||+|+...|.++++.+++
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34455543445578999999999999999999987554
No 249
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.04 E-value=2.7e-06 Score=55.10 Aligned_cols=32 Identities=6% Similarity=0.293 Sum_probs=24.7
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
++.|+++|||+|+...+.|++ .++.+..+++|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECC
Confidence 566999999999988777765 24666777776
No 250
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.96 E-value=3.5e-06 Score=64.05 Aligned_cols=43 Identities=5% Similarity=0.073 Sum_probs=36.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d 131 (225)
.++++||.||..|||+|....+.+ .++.+++.+ +++++.+.++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 467899999999999999999986 678877775 4888888876
No 251
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.90 E-value=1.8e-05 Score=50.16 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=24.3
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
++.|+++||++|+...+.|+++ ++.+..+.+|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 4568999999999888877653 4666667766
No 252
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.85 E-value=2.8e-05 Score=56.67 Aligned_cols=36 Identities=19% Similarity=0.377 Sum_probs=28.3
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEe
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is 129 (225)
.|+++|+.|...+||+|++..+.++++ + +++++.+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~ 48 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFM 48 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEE
Confidence 578999999999999999998888654 3 26665553
No 253
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.83 E-value=2.4e-05 Score=59.21 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=34.7
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
++++||.|+.-|||+|....|.+.++.+++ ++.+.-+.++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---CCeEEEEecc
Confidence 689999999999999999999999999998 3666666664
No 254
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.79 E-value=2.8e-05 Score=58.79 Aligned_cols=43 Identities=14% Similarity=0.195 Sum_probs=36.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHH-HHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l-~~l~~~~~~~~~~iv~Is~d 131 (225)
.+++++|.||..+||+|....+.+ .++.+++..+ +++..+.++
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecC
Confidence 467788899999999999999999 9999988754 787777765
No 255
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.79 E-value=4.3e-05 Score=57.10 Aligned_cols=43 Identities=9% Similarity=0.019 Sum_probs=35.6
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.++++||.|+.-.||+|...-+.+.++.+++.+. +.++-+...
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~~~ 62 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNHVS 62 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEECS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEecC
Confidence 4788999999999999999999999999998765 666655543
No 256
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.76 E-value=1e-05 Score=55.16 Aligned_cols=26 Identities=27% Similarity=0.281 Sum_probs=20.2
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHH
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKY 118 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~ 118 (225)
++.|+++|||+|+...+.|.++..++
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~ 39 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE 39 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC
Confidence 55599999999998888887654443
No 257
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.71 E-value=4.1e-06 Score=64.20 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=39.0
Q ss_pred CCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~ 132 (225)
.++++||.||+.|||+|....|.+ .++.++++++ +.+.-+.++.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~-v~~~~~~v~~ 158 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG-VKMTKYHVNF 158 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT-CCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC-CEEEEeccCc
Confidence 478999999999999999999998 9999998754 8999998873
No 258
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.59 E-value=0.00087 Score=44.59 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=47.4
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCchhh
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPL 172 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 172 (225)
|+.|..+|||.|.+.-..|++ +|+.+.-+.+|. +.+..++.. +..
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~~-------d~~~~~~~~-~~~-------------------- 50 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIEH-------NRAAAEFVG-SVN-------------------- 50 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETTT-------CHHHHHHHH-HHS--------------------
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcCC-------CHHHHHHHH-HHc--------------------
Confidence 455889999999965555443 456666777763 344333322 210
Q ss_pred hhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 173 YKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
.|.+.+|++++ .||.+.. ..+.+++++.|+++.
T Consensus 51 -------------~G~~tVP~I~i--~Dg~~l~----~~~~~el~~~L~el~ 83 (92)
T 2lqo_A 51 -------------GGNRTVPTVKF--ADGSTLT----NPSADEVKAKLVKIA 83 (92)
T ss_dssp -------------SSSSCSCEEEE--TTSCEEE----SCCHHHHHHHHHHHH
T ss_pred -------------CCCCEeCEEEE--eCCEEEe----CCCHHHHHHHHHHhc
Confidence 04455688655 4577642 246788999888874
No 259
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.55 E-value=0.0006 Score=51.18 Aligned_cols=110 Identities=14% Similarity=0.058 Sum_probs=68.4
Q ss_pred ccCCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeee
Q 027311 86 IYKGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKV 162 (225)
Q Consensus 86 ~~~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (225)
.-.+|+++|++.++||+.|......+ .++.+-+.+ ++.+.+.+++ +.+....+. ...+
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~--------~~e~~~~~~-~~~~--------- 112 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLT--------KDSNRARFL-TMCN--------- 112 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECC--------SHHHHHHHH-HHHH---------
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCC--------Cchhhhhhh-hhhh---------
Confidence 44689999999999999988655332 234444443 5888888876 333322222 1000
Q ss_pred cCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCC---cEEEEcCCCCChhhHHHHHHhhh
Q 027311 163 DVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEG---NVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G---~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
+..+.......+.+ ++.++|+..+|+++| +++.+..|..+++++.+.|...+
T Consensus 113 ~~~g~~~a~~~~~~----------~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 113 RHFGSVVAQTIRTQ----------KTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp HHTCHHHHHHHHHS----------CSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhc----------CCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 00011111110001 677889999998774 78999999999999888887653
No 260
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.51 E-value=0.00011 Score=52.14 Aligned_cols=33 Identities=6% Similarity=0.134 Sum_probs=23.0
Q ss_pred EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.+++ |+++|||+|+...+.|.++. +.+..+.+|
T Consensus 28 ~vvv-f~~~~Cp~C~~~~~~L~~~~-------i~~~~vdid 60 (130)
T 2cq9_A 28 CVVI-FSKTSCSYCTMAKKLFHDMN-------VNYKVVELD 60 (130)
T ss_dssp SEEE-EECSSCSHHHHHHHHHHHHT-------CCCEEEETT
T ss_pred cEEE-EEcCCChHHHHHHHHHHHcC-------CCcEEEECc
Confidence 3444 99999999998888777652 344455665
No 261
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.49 E-value=2.2e-05 Score=54.50 Aligned_cols=33 Identities=9% Similarity=0.170 Sum_probs=23.3
Q ss_pred EEEEEcccCCCCChHhHHHHHHHHHHHhcCCeE---EEEEecC
Q 027311 92 LLIVNVASQCGLTNSNYTELSQLYDKYKNQGLE---ILAFPCN 131 (225)
Q Consensus 92 vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~---iv~Is~d 131 (225)
.|+.|+++|||+|+...+.|.++ ++. +..|.+|
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~-------~~~~~~~~~vdi~ 55 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKF-------SFKRGAYEIVDIK 55 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTS-------CBCTTSEEEEEGG
T ss_pred CEEEEEeCCChhHHHHHHHHHHc-------CCCcCceEEEEcc
Confidence 45669999999999777766543 344 5566665
No 262
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.46 E-value=0.00018 Score=54.59 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=36.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHH---HHHHHHHhcCCeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTEL---SQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l---~~l~~~~~~~~~~iv~Is~d 131 (225)
.++++|+.|+.-+||+|...-+.+ .++.+++.++ ++++-+.++
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 468999999999999999999987 6899999764 777777765
No 263
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.38 E-value=0.00019 Score=52.10 Aligned_cols=23 Identities=9% Similarity=0.208 Sum_probs=18.2
Q ss_pred EEEEEEcccCCCCChHhHHHHHHH
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQL 114 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l 114 (225)
.++| |+++|||+|+...+.|.++
T Consensus 50 ~Vvv-f~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 50 CVVI-FSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp SEEE-EECTTCHHHHHHHHHHHHH
T ss_pred CEEE-EECCCChhHHHHHHHHHHc
Confidence 3444 9999999999888877765
No 264
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.37 E-value=0.0003 Score=47.68 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=18.3
Q ss_pred EEEEEcccCCCCChHhHHHHHHH
Q 027311 92 LLIVNVASQCGLTNSNYTELSQL 114 (225)
Q Consensus 92 vlv~F~~twC~~C~~~~~~l~~l 114 (225)
.++.|+++|||+|+...+.|+++
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHHHc
Confidence 35559999999999888777764
No 265
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.06 E-value=0.00058 Score=53.27 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=34.9
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHH-HHHHHHHhcC-CeEEEEEecC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKNQ-GLEILAFPCN 131 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l-~~l~~~~~~~-~~~iv~Is~d 131 (225)
-.++++|+.|+.-.||.|...-+.+ .++.++|.+. +++++.....
T Consensus 37 ~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 37 PKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 3578999999999999999988864 7888888543 3777766653
No 266
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.97 E-value=0.002 Score=41.15 Aligned_cols=32 Identities=16% Similarity=0.308 Sum_probs=22.5
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
++.|+++|||.|....+.|++. ++.+..+.+|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPID 34 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECC
Confidence 4558899999999877777653 3555556655
No 267
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.94 E-value=0.00096 Score=46.43 Aligned_cols=36 Identities=17% Similarity=0.277 Sum_probs=22.4
Q ss_pred EEEEcccCCCCChHh-HHHHHHHHHHHhcCCeEEEEEecCC
Q 027311 93 LIVNVASQCGLTNSN-YTELSQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 93 lv~F~~twC~~C~~~-~~~l~~l~~~~~~~~~~iv~Is~d~ 132 (225)
|+.|+++|||+|... .+.|.+ .+...+.+..+.+|.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~----~~~~~i~~~~vdid~ 63 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEK----LKVPRSKVLVLQLND 63 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTT----SCCCGGGEEEEEGGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHH----cCCCCCCeEEEECcc
Confidence 445999999999976 444433 221116666677663
No 268
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.92 E-value=0.0023 Score=42.01 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=17.2
Q ss_pred EEEEcccCCCCChHhHHHHHHH
Q 027311 93 LIVNVASQCGLTNSNYTELSQL 114 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l 114 (225)
++.|+++|||.|+.....|.++
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 4458899999999877777654
No 269
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.85 E-value=0.01 Score=45.86 Aligned_cols=92 Identities=5% Similarity=0.027 Sum_probs=61.1
Q ss_pred EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcceeeeecCCCCCch
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAA 170 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 170 (225)
.+++.|...||+.|....+.++++.++++++ +.++.+..|. +.....+ +.+++.
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~---------~~~~~~l-~~fgl~--------------- 186 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM---------KENGKVI-SFFKLK--------------- 186 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS---------GGGHHHH-HHTTCC---------------
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc---------HhHHHHH-HHcCCC---------------
Confidence 4445565779999999999999999999877 8888777541 1111222 222221
Q ss_pred hhhhhccccCCCCCCCccccceeEEEECCCCcEEEEc-CCCCChhhHHHHHHhhhC
Q 027311 171 PLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERY-APTTSPLSIEVVLECLCC 225 (225)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~-~g~~~~~~l~~~l~~ll~ 225 (225)
-...|+..+++..+...+.. .+..+.+.|++.++.+++
T Consensus 187 -----------------~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 187 -----------------ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp -----------------GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHT
T ss_pred -----------------cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhC
Confidence 11458888888666544444 367788999999988764
No 270
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.81 E-value=0.002 Score=41.82 Aligned_cols=21 Identities=5% Similarity=0.031 Sum_probs=16.1
Q ss_pred EEEEcccCCCCChHhHHHHHH
Q 027311 93 LIVNVASQCGLTNSNYTELSQ 113 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~ 113 (225)
++.|+.+|||.|+.....|++
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHH
Confidence 566889999999976665544
No 271
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.77 E-value=0.0022 Score=44.00 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=17.2
Q ss_pred EEEEcccCCCCChHhHHHHHHH
Q 027311 93 LIVNVASQCGLTNSNYTELSQL 114 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l 114 (225)
|+.|+.+|||+|....+.|.++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 4559999999999777777653
No 272
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.75 E-value=0.0037 Score=42.29 Aligned_cols=33 Identities=18% Similarity=0.386 Sum_probs=23.0
Q ss_pred EEEEEEcc-----cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 91 LLLIVNVA-----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 91 ~vlv~F~~-----twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.++| |+. +|||+|....+.|.++ ++.+..+.+|
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~ 55 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 55 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECC
Confidence 4555 555 9999999877777654 3556666666
No 273
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.12 E-value=0.0095 Score=39.91 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=24.2
Q ss_pred EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.-|+.|+.+|||.|......|++. ++.+..+.+|
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~ 49 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCID 49 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred CCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcC
Confidence 344559999999999888777764 3455556666
No 274
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.11 E-value=0.014 Score=40.07 Aligned_cols=19 Identities=21% Similarity=0.125 Sum_probs=15.3
Q ss_pred EcccCCCCChHhHHHHHHH
Q 027311 96 NVASQCGLTNSNYTELSQL 114 (225)
Q Consensus 96 F~~twC~~C~~~~~~l~~l 114 (225)
|+.+|||.|......|+++
T Consensus 22 y~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 22 FSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp EECTTCHHHHHHHHHHHHT
T ss_pred EEcCCCCcHHHHHHHHHHc
Confidence 8899999999777666653
No 275
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=95.82 E-value=0.012 Score=38.35 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=22.9
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
++.|+.+|||.|+...+.|++. ++.+..+.++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~ 39 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK-------GAEFNEIDAS 39 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEST
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 5568899999999777666543 4556666665
No 276
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.82 E-value=0.12 Score=39.13 Aligned_cols=37 Identities=5% Similarity=-0.158 Sum_probs=30.3
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
++.++|+. +|+.+|+.+....|..+.+++.+.|++++
T Consensus 166 gv~g~Pt~-~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 166 GVNSYPSL-VLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp TCCSSSEE-EEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred CCCcccEE-EEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 89999995 55667887777788888899999998876
No 277
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.50 E-value=0.046 Score=37.04 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=23.6
Q ss_pred EEEEEEcc----cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCC
Q 027311 91 LLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 91 ~vlv~F~~----twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~ 132 (225)
.++|+..+ +|||.|......|+++ ++.+..+.++.
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~ 54 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILE 54 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSS
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCC
Confidence 45554443 8999999777666543 46677777763
No 278
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.31 E-value=0.014 Score=41.15 Aligned_cols=21 Identities=14% Similarity=0.301 Sum_probs=15.3
Q ss_pred EEEEcccCCCCChHh-HHHHHH
Q 027311 93 LIVNVASQCGLTNSN-YTELSQ 113 (225)
Q Consensus 93 lv~F~~twC~~C~~~-~~~l~~ 113 (225)
|+.|+.+|||.|... .+.|.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~ 60 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQE 60 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTT
T ss_pred EEEEECCCCCchHHHHHHHHHh
Confidence 456899999999977 444443
No 279
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.06 E-value=0.018 Score=37.35 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=17.7
Q ss_pred EEEEcccCCCCChHhHHHHHHH
Q 027311 93 LIVNVASQCGLTNSNYTELSQL 114 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l 114 (225)
++.|+++|||.|+...+.|++.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~ 29 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK 29 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 5568999999999877777653
No 280
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=94.18 E-value=0.52 Score=32.69 Aligned_cols=35 Identities=9% Similarity=-0.054 Sum_probs=26.9
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEE
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAF 128 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~I 128 (225)
.+++||-||.+||..| .+.+.+..+.+ +. +.+...
T Consensus 39 ~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d-~~F~~t 73 (124)
T 2l4c_A 39 TEVAVIGFFQDLEIPA---VPILHSMVQKF-PG-VSFGIS 73 (124)
T ss_dssp SSEEEEEECSCTTSTH---HHHHHHHHHHC-TT-SEEEEE
T ss_pred CCCEEEEEECCCCChh---HHHHHHHHHhC-CC-ceEEEE
Confidence 5799999999999998 56777888887 33 766544
No 281
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.11 E-value=0.72 Score=36.61 Aligned_cols=39 Identities=10% Similarity=0.120 Sum_probs=29.6
Q ss_pred EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCC
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~ 132 (225)
..|..|...+||.|...-..|.++..++ ++..+.+.++.
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~~ 82 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVDY 82 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECST
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEEE
Confidence 5666688999999999988888887653 46566676653
No 282
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=93.98 E-value=0.31 Score=37.66 Aligned_cols=37 Identities=19% Similarity=0.050 Sum_probs=31.2
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
+|+.+|+.++++++|++..........+.+...|++|
T Consensus 202 ~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 202 GVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp TCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred CCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 8999999999999999988877666667777777765
No 283
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=93.03 E-value=0.86 Score=34.25 Aligned_cols=37 Identities=5% Similarity=-0.147 Sum_probs=29.9
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
++.++|++++. .+|+.+....|..+.+.+.+.|++++
T Consensus 173 gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 173 GISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred CCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 89999997765 46876656788888899999988875
No 284
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=92.97 E-value=0.65 Score=37.99 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=31.8
Q ss_pred CEEEEEEcccCCCCChHhHHHHHHHHHHHhc-CCeEEEEEecC
Q 027311 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPCN 131 (225)
Q Consensus 90 k~vlv~F~~twC~~C~~~~~~l~~l~~~~~~-~~~~iv~Is~d 131 (225)
+..++.|...||+.|....+.++++.+++++ ..+.++.+..+
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~ 288 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD 288 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch
Confidence 3344558888998899999999999999984 34777777644
No 285
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.81 E-value=0.41 Score=32.41 Aligned_cols=36 Identities=14% Similarity=0.249 Sum_probs=20.8
Q ss_pred EEEEcccCCCCChH--hHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNS--NYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~--~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
|+.|..++||.|.. .-....++.+ ..++.+..+.++
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~---~~gi~y~~vdI~ 47 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLE---ANKIEFEEVDIT 47 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH---HTTCCEEEEETT
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHH---HcCCCEEEEECC
Confidence 44577899999992 1112222332 345667677776
No 286
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=92.56 E-value=0.062 Score=42.83 Aligned_cols=40 Identities=10% Similarity=0.204 Sum_probs=32.1
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEec
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPC 130 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~ 130 (225)
.|+.+|+.|+-..||+|++..+.+++..+. -.++++.+.+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 478999999999999999999999976654 3377776654
No 287
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=91.81 E-value=0.75 Score=38.02 Aligned_cols=42 Identities=7% Similarity=-0.001 Sum_probs=33.2
Q ss_pred CEEEEEEcccCCCCChHhHHHHHHHHHHHhcC-CeEEEEEecC
Q 027311 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQ-GLEILAFPCN 131 (225)
Q Consensus 90 k~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~-~~~iv~Is~d 131 (225)
++.++.|...+|+.|...+..++++.++++++ .+.++.|..+
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~ 290 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPD 290 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGG
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCc
Confidence 35566688888888888999999999999875 3888877655
No 288
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=91.76 E-value=0.19 Score=38.03 Aligned_cols=44 Identities=2% Similarity=0.107 Sum_probs=34.5
Q ss_pred CCCEEEEEEcccCCCCChHhHHHH-HHHHHHHhcC-CeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKNQ-GLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l-~~l~~~~~~~-~~~iv~Is~d 131 (225)
.++++|+.|+.-.||.|....+.+ ..+.++|.+. +++++-..+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 578999999999999999888876 5677778643 3888877654
No 289
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=91.72 E-value=0.48 Score=30.26 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=20.6
Q ss_pred EEEEccc----CCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVAS----QCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~t----wC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
|+.|+.+ |||.|......|++ .|+.+-.+.++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 3457789 99999966655544 33555555555
No 290
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=91.68 E-value=0.58 Score=30.31 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=19.2
Q ss_pred EEEEcccCCCCCh--HhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTN--SNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~--~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
|+.|..++||.|. ..-....++.+ +.|+.+..+.++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~---~~~i~~~~~di~ 41 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD---GKRIQYQLVDIS 41 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH---HTTCCCEEEETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH---HCCCceEEEECC
Confidence 3447789999993 11112222222 345666666665
No 291
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=91.25 E-value=0.4 Score=33.46 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=27.3
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHH
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFA 148 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~ 148 (225)
|+.|..+|||.|......|++.. .+ ...+.++-|..+. +.+++++++
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~-~~-~v~~~~idid~~~-------d~~~~~~~l 62 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEY-QF-IPNYYIIELDKHG-------HGEELQEYI 62 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHE-EE-ESCCEEEEGGGST-------THHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHhc-cc-CCCcEEEEecCCC-------CHHHHHHHH
Confidence 44578899999997766666531 01 1125555554432 445666665
No 292
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=91.21 E-value=0.15 Score=38.04 Aligned_cols=43 Identities=14% Similarity=0.224 Sum_probs=33.8
Q ss_pred CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEec
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPC 130 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~ 130 (225)
.++++|+.|..-.||+|.+..+.+.++.+++....++++.-..
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 4778899999999999999999998887776222388776654
No 293
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=90.99 E-value=0.23 Score=36.67 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=33.9
Q ss_pred CCCEEEEEEcccCCCCChHhHHHH-HHHHHHHhcC-CeEEEEEecC
Q 027311 88 KGKLLLIVNVASQCGLTNSNYTEL-SQLYDKYKNQ-GLEILAFPCN 131 (225)
Q Consensus 88 ~gk~vlv~F~~twC~~C~~~~~~l-~~l~~~~~~~-~~~iv~Is~d 131 (225)
.++++|+.|+...||.|....+.+ .++.++|.+. +++++-..+.
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 467888889999999999999998 5687888653 3777766543
No 294
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=90.67 E-value=0.24 Score=35.08 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=22.1
Q ss_pred EEEEEEcc----cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 91 LLLIVNVA----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 91 ~vlv~F~~----twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
.|+|+.++ +|||.|......|+++ |+.+..+.++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDIL 73 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECC
Confidence 45565555 7999999766666442 4556666665
No 295
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=88.73 E-value=0.91 Score=31.72 Aligned_cols=53 Identities=9% Similarity=0.115 Sum_probs=34.5
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcc
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
+..|..++|+.|......|++ .|+.+-.+.++. .+.+.+++.+++ +..+.++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~----~~~~~~el~~~l-~~~~~~~~ 55 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFS----EPLSIDEIKQIL-RMTEDGTD 55 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTT----SCCCHHHHHHHH-HTCSSCGG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccC----CCccHHHHHHHH-HHcCCCHH
Confidence 345678999999977766664 345555566552 344678888887 55455443
No 296
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=88.37 E-value=0.65 Score=31.44 Aligned_cols=35 Identities=11% Similarity=0.276 Sum_probs=22.0
Q ss_pred CCEEEEEEcc-----cCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 89 GKLLLIVNVA-----SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 89 gk~vlv~F~~-----twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
..+|+| |.. +|||.|......|++. |+.+..+.++
T Consensus 15 ~~~Vvl-f~kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~~~di~ 54 (111)
T 3zyw_A 15 AAPCML-FMKGTPQEPRCGFSKQMVEILHKH-------NIQFSSFDIF 54 (111)
T ss_dssp SSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred cCCEEE-EEecCCCCCcchhHHHHHHHHHHc-------CCCeEEEECc
Confidence 345555 555 8999999776666542 3444555555
No 297
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=87.53 E-value=5.6 Score=30.66 Aligned_cols=33 Identities=12% Similarity=-0.092 Sum_probs=23.8
Q ss_pred ceeEEEECCCCcEEEEcCCCCChhh--HHHHHHhhh
Q 027311 191 NFSKFLVDKEGNVVERYAPTTSPLS--IEVVLECLC 224 (225)
Q Consensus 191 ~P~~~lid~~G~I~~~~~g~~~~~~--l~~~l~~ll 224 (225)
.|...|+|.+|. .+...+..+.+. |.+.++.++
T Consensus 195 ~P~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 195 IPVVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYF 229 (252)
T ss_dssp SCEEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHH
T ss_pred CCEEEEEeCcCc-EecCCcccCcchHHHHHHHHHHH
Confidence 588888887665 455556666677 888888765
No 298
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=87.10 E-value=2 Score=29.43 Aligned_cols=25 Identities=12% Similarity=0.331 Sum_probs=16.0
Q ss_pred CEEEEEEcc----cCCCCChHhHHHHHHH
Q 027311 90 KLLLIVNVA----SQCGLTNSNYTELSQL 114 (225)
Q Consensus 90 k~vlv~F~~----twC~~C~~~~~~l~~l 114 (225)
..|+|+--. +|||.|......|++.
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHc
Confidence 345553333 3999999776666654
No 299
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=86.95 E-value=1.3 Score=33.50 Aligned_cols=45 Identities=16% Similarity=-0.044 Sum_probs=33.8
Q ss_pred ccCCCEEEEEEcccCCCCChHhHHHHHHHHH-HHhcC-CeEEEEEec
Q 027311 86 IYKGKLLLIVNVASQCGLTNSNYTELSQLYD-KYKNQ-GLEILAFPC 130 (225)
Q Consensus 86 ~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~-~~~~~-~~~iv~Is~ 130 (225)
+-.++++|+.|..--||.|....+.+....+ +|-+. .++++....
T Consensus 12 ~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 12 NPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 3457899999999999999998888765544 77322 388776664
No 300
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=85.55 E-value=1.6 Score=29.93 Aligned_cols=52 Identities=6% Similarity=0.082 Sum_probs=34.4
Q ss_pred EEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcc
Q 027311 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (225)
Q Consensus 94 v~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
..|..++|+.|+.....|++ .|+.+-.+.++ ..+.+.+++.+++ +..+.++.
T Consensus 3 ~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~el~~~l-~~~~~~~~ 54 (120)
T 3l78_A 3 TLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIM----TSPLSRDELLKIL-SYTENGTE 54 (120)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHH-HHCSSTHH
T ss_pred EEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecc----cCCCcHHHHHHHH-hhcCCCHH
Confidence 34668899999977766653 34555556654 2345889999998 55455543
No 301
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=84.80 E-value=1.1 Score=30.10 Aligned_cols=25 Identities=20% Similarity=0.313 Sum_probs=16.1
Q ss_pred CCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 100 QCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 100 wC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
|||.|.+....|++. |+.+-.+.++
T Consensus 32 ~Cp~C~~ak~~L~~~-------gi~~~~~dI~ 56 (109)
T 3ipz_A 32 MCGFSNTVVQILKNL-------NVPFEDVNIL 56 (109)
T ss_dssp SSHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred CChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 999999766666553 3444455554
No 302
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=83.69 E-value=2.1 Score=32.77 Aligned_cols=23 Identities=9% Similarity=0.086 Sum_probs=16.6
Q ss_pred EEEEEEcccCCCCChHhHHHHHH
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQ 113 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~ 113 (225)
..++.|..+|||.|.+....|++
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHH
T ss_pred ceEEEEECCCChHHHHHHHHHHH
Confidence 34555778999999977666654
No 303
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=83.11 E-value=2.2 Score=29.12 Aligned_cols=23 Identities=22% Similarity=0.424 Sum_probs=14.8
Q ss_pred CEEEEEEccc-----CCCCChHhHHHHHH
Q 027311 90 KLLLIVNVAS-----QCGLTNSNYTELSQ 113 (225)
Q Consensus 90 k~vlv~F~~t-----wC~~C~~~~~~l~~ 113 (225)
..|+| |..+ |||.|......|++
T Consensus 20 ~~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~ 47 (118)
T 2wem_A 20 DKVVV-FLKGTPEQPQCGFSNAVVQILRL 47 (118)
T ss_dssp SSEEE-EESBCSSSBSSHHHHHHHHHHHH
T ss_pred CCEEE-EEecCCCCCccHHHHHHHHHHHH
Confidence 34555 4443 99999966655554
No 304
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=82.43 E-value=0.76 Score=31.22 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=30.3
Q ss_pred EEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 94 v~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
..|..++|+.|++....|++ .|+.+-.+.++. .+.+.+++++++ ++.|
T Consensus 3 ~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~----~~~~~~~l~~~~-~~~g 50 (114)
T 1rw1_A 3 VLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKA----VGIDREHLRRWC-AEHG 50 (114)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHH----HCCCHHHHHHHH-HHHC
T ss_pred EEEECCCChHHHHHHHHHHH-------CCCceEEEeecC----CCCCHHHHHHHH-HhCC
Confidence 34668899999977766654 345554455431 223668888887 4444
No 305
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=81.61 E-value=2.3 Score=29.11 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=34.5
Q ss_pred EEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcc
Q 027311 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (225)
Q Consensus 94 v~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
..|..++|+.|++....|++ +|+.+-.+.+. ..+.+.+++.+++ ++.+.++.
T Consensus 6 ~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~~~~ 57 (120)
T 3fz4_A 6 TFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIK----KNPPAASLIRNWL-ENSGLELK 57 (120)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------HTCCEEEEETT----TSCCCHHHHHHHH-HHSCCCGG
T ss_pred EEEeCCCChHHHHHHHHHHH-------cCCceEEEEec----cCchhHHHHHHHH-HHcCCCHH
Confidence 34568899999987766653 23444445543 2345889999998 66666544
No 306
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=80.93 E-value=7.6 Score=26.68 Aligned_cols=38 Identities=13% Similarity=0.072 Sum_probs=21.5
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
|+.|..+.||.|.. -..=.+...-+..+|+.+--+.++
T Consensus 2 V~vYtt~~c~~c~~-kk~c~~aK~lL~~kgV~feEidI~ 39 (121)
T 1u6t_A 2 IRVYIASSSGSTAI-KKKQQDVLGFLEANKIGFEEKDIA 39 (121)
T ss_dssp EEEEECTTCSCHHH-HHHHHHHHHHHHHTTCCEEEEECT
T ss_pred EEEEecCCCCCccc-hHHHHHHHHHHHHCCCceEEEECC
Confidence 45567899999951 111122222344556777777766
No 307
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=79.91 E-value=13 Score=26.09 Aligned_cols=34 Identities=9% Similarity=-0.119 Sum_probs=21.9
Q ss_pred ceeEEEECC-CCcEEEEcC-CCCChhhHHHHHHhhh
Q 027311 191 NFSKFLVDK-EGNVVERYA-PTTSPLSIEVVLECLC 224 (225)
Q Consensus 191 ~P~~~lid~-~G~I~~~~~-g~~~~~~l~~~l~~ll 224 (225)
.|++.|++. .....+... +..+.+.+++.++.++
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHH
Confidence 577778875 222224432 6677888988888776
No 308
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=79.19 E-value=2.3 Score=29.19 Aligned_cols=52 Identities=8% Similarity=0.029 Sum_probs=34.2
Q ss_pred EEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCcc
Q 027311 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFP 157 (225)
Q Consensus 94 v~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
..|..++|+.|++....|++ .|+.+-.+.+. ..+.+.+++.+++ +..+.++.
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~~~~ 58 (120)
T 3gkx_A 7 LFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIV----DDNPTVEELKAWI-PLSGLPVK 58 (120)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT----TTCCCHHHHHHHH-HHHTSCGG
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCceEEEecc----cCcCCHHHHHHHH-HHcCCCHH
Confidence 34568899999977766653 34554445543 2345889999998 55565544
No 309
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=78.91 E-value=9.7 Score=28.72 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=26.0
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEE
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILA 127 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~ 127 (225)
.+++||-|+++|| ....+.+.++.+.++ .+.+..
T Consensus 27 ~~v~vVgff~~~~---~~~~~~f~~~A~~l~--~~~F~~ 60 (227)
T 4f9z_D 27 TEVAVIGFFQDLE---IPAVPILHSMVQKFP--GVSFGI 60 (227)
T ss_dssp SSEEEEEECSCSC---STHHHHHHHHTTTCT--TSEEEE
T ss_pred CCeEEEEEecCCC---chhHHHHHHHHHhCC--CceEEE
Confidence 5789999999884 567788888888884 366654
No 310
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=78.19 E-value=1.2 Score=30.59 Aligned_cols=49 Identities=14% Similarity=0.207 Sum_probs=30.6
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFK 153 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~ 153 (225)
+..|..++|+.|++....|++. |+.+-.+.++. .+.+.+++++++ ++.|
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~----~~~~~~~l~~~~-~~~g 55 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKK----EGLDAETLDRFL-KTVP 55 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHH----HCCCHHHHHHHH-HHSC
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeC----CCCCHHHHHHHH-HHcC
Confidence 3346688999999777776652 34444444431 123678888887 5555
No 311
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=77.43 E-value=2.3 Score=32.06 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=26.7
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhhC
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLCC 225 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll~ 225 (225)
+|.++|+++| +|+. ..|..+.+.+++.|++++|
T Consensus 165 GV~GtPtfvv---ng~~---~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 165 NVSGTPSFMI---DGIL---LAGTHDWASLRPQILARLN 197 (205)
T ss_dssp CCCSSSEEEE---TTEE---CTTCCSHHHHHHHHHHHHT
T ss_pred CCccCCEEEE---CCEE---EeCCCCHHHHHHHHHHHhh
Confidence 8999999765 5663 5778889999999998875
No 312
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=74.78 E-value=3 Score=29.46 Aligned_cols=49 Identities=8% Similarity=0.184 Sum_probs=32.3
Q ss_pred EEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCC
Q 027311 95 VNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (225)
Q Consensus 95 ~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (225)
.|..++|+.|++....|++ +|+.+-.+.+. ..+.+.+++.++. .+.+.+
T Consensus 6 iY~~p~C~~crkak~~L~~-------~gi~~~~idi~----~~~~~~~eL~~~~-~~~g~p 54 (141)
T 1s3c_A 6 IYHNPASGTSRNTLEMIRN-------SGTEPTIILYL----ENPPSRDELVKLI-ADMGIS 54 (141)
T ss_dssp EECCTTCHHHHHHHHHHHH-------TTCCCEEECTT----TSCCCHHHHHHHH-HHHTSC
T ss_pred EEECCCChHHHHHHHHHHH-------cCCCEEEEECC----CCCccHHHHHHHh-cccCCC
Confidence 4668899999977666654 44555556554 2345788888887 444543
No 313
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=73.77 E-value=0.45 Score=23.81 Aligned_cols=21 Identities=10% Similarity=0.094 Sum_probs=17.5
Q ss_pred CCCCChHhHHHHHHHHHHHhc
Q 027311 100 QCGLTNSNYTELSQLYDKYKN 120 (225)
Q Consensus 100 wC~~C~~~~~~l~~l~~~~~~ 120 (225)
-||.|+..+|..+.+..-|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 599999999999888776654
No 314
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=72.33 E-value=17 Score=27.79 Aligned_cols=33 Identities=6% Similarity=0.036 Sum_probs=22.5
Q ss_pred eeEEEECCCCcEEEEcC-CCCChhhHHHHHHhhhC
Q 027311 192 FSKFLVDKEGNVVERYA-PTTSPLSIEVVLECLCC 225 (225)
Q Consensus 192 P~~~lid~~G~I~~~~~-g~~~~~~l~~~l~~ll~ 225 (225)
|..+++|.+|. .+... +..+.+.|.+.++.+++
T Consensus 195 p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 195 VNAAILDESGK-KFAMEPEEFDSDALREFVMAFKK 228 (250)
T ss_dssp CEEEEECTTSC-EEECCCCSCCHHHHHHHHHHHHT
T ss_pred cEEEEEcCCCc-eecCCcccCCHHHHHHHHHHHHC
Confidence 46677786665 34443 46778899999888763
No 315
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=72.10 E-value=3 Score=30.41 Aligned_cols=32 Identities=22% Similarity=0.135 Sum_probs=23.7
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
+|.++|+++| +|+. ..|..+.+.+.+.|++++
T Consensus 146 gv~GtPt~vv---nG~~---~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 146 HIKTTPTAFI---NGEK---VEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp TCCSSSEEEE---TTEE---CSCTTCHHHHHHHHHC--
T ss_pred CCCCCCeEEE---CCEE---cCCCCCHHHHHHHHHHHH
Confidence 8999999766 5764 457778889999988765
No 316
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=72.04 E-value=4.4 Score=27.72 Aligned_cols=49 Identities=10% Similarity=0.237 Sum_probs=33.1
Q ss_pred EEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCC
Q 027311 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKA 154 (225)
Q Consensus 94 v~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~ 154 (225)
..|..++|+.|++....|+ +.|+.+-.+.+. ..+.+.+++.+++ +..|.
T Consensus 8 ~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~ 56 (121)
T 3rdw_A 8 TIYHNPRCSKSRETLALVE-------QQGITPQVVLYL----ETPPSVDKLKELL-QQLGF 56 (121)
T ss_dssp EEECCTTCHHHHHHHHHHH-------TTTCCCEEECTT----TSCCCHHHHHHHH-HHTTC
T ss_pred EEEECCCCHHHHHHHHHHH-------HcCCCcEEEeec----cCCCcHHHHHHHH-HhcCC
Confidence 3466889999997776664 344555555554 2455889999998 66565
No 317
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=71.85 E-value=31 Score=26.33 Aligned_cols=36 Identities=3% Similarity=0.141 Sum_probs=26.2
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEE
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAF 128 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~I 128 (225)
.++++|-|+.++ |....+.+.++.+.++++ +.+...
T Consensus 25 ~~v~vVgff~~~---~~~~~~~F~~~A~~lr~~-~~F~~t 60 (250)
T 3ec3_A 25 DDVVILGVFQGV---GDPGYLQYQDAANTLRED-YKFHHT 60 (250)
T ss_dssp SSCEEEEECSCT---TCHHHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEEEEcCC---CchHHHHHHHHHHhhhcC-cEEEEE
Confidence 467788888876 457778888888888765 665544
No 318
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=70.89 E-value=4.1 Score=30.42 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=25.4
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
+|.++|+++| +|+. ..|..+.+.+++.|++++
T Consensus 160 gV~gtPtfvv---nG~~---~~G~~~~e~l~~~i~~~~ 191 (202)
T 3gha_A 160 NIQATPTIYV---NDKV---IKNFADYDEIKETIEKEL 191 (202)
T ss_dssp TCCSSCEEEE---TTEE---CSCTTCHHHHHHHHHHHH
T ss_pred CCCcCCEEEE---CCEE---ecCCCCHHHHHHHHHHHH
Confidence 8999999666 5664 567778899999998875
No 319
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=69.33 E-value=17 Score=29.72 Aligned_cols=32 Identities=6% Similarity=-0.119 Sum_probs=17.8
Q ss_pred ceeEEEECCCCcEEEEcC---CCCChhhHHHHHHhhh
Q 027311 191 NFSKFLVDKEGNVVERYA---PTTSPLSIEVVLECLC 224 (225)
Q Consensus 191 ~P~~~lid~~G~I~~~~~---g~~~~~~l~~~l~~ll 224 (225)
.|...+++. ++. +.+. +..+++.+++.++.++
T Consensus 294 ~P~i~i~~~-~~~-y~~~~~~~~~~~~~i~~F~~d~~ 328 (382)
T 2r2j_A 294 CPVIAIDSF-RHM-YVFGDFKDVLIPGKLKQFVFDLH 328 (382)
T ss_dssp CSEEEEECS-SCE-EECCCSGGGGSTTHHHHHHHHHH
T ss_pred CCEEEEEcc-hhc-CCCCccccccCHHHHHHHHHHHH
Confidence 476666654 443 3332 2224567888877765
No 320
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=67.88 E-value=67 Score=28.60 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=30.2
Q ss_pred ccCCCceecCeEEeCC-CCCeecCCc-c--CCCEEEEEEccc
Q 027311 62 ASQSKTSVHDFSVKDA-KGQDVDLSI-Y--KGKLLLIVNVAS 99 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~-~G~~~~l~~-~--~gk~vlv~F~~t 99 (225)
...+|..+|++.+... +|+.+++.+ + .|+++|+.|-..
T Consensus 478 ~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~ 519 (665)
T 1pn0_A 478 NCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGK 519 (665)
T ss_dssp TSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEEC
T ss_pred CCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCC
Confidence 3578999999999764 888888888 4 378999988643
No 321
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=65.79 E-value=42 Score=25.53 Aligned_cols=36 Identities=3% Similarity=-0.000 Sum_probs=26.0
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEE
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAF 128 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~I 128 (225)
.++++|-|+.+| |......+.++...++++ +.+..+
T Consensus 24 ~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~-~~F~~~ 59 (252)
T 2h8l_A 24 KDASIVGFFDDS---FSEAHSEFLKAASNLRDN-YRFAHT 59 (252)
T ss_dssp SSCEEEEEESCT---TSHHHHHHHHHHHHTTTT-SCEEEE
T ss_pred CCeEEEEEECCC---CChHHHHHHHHHHhcccC-cEEEEE
Confidence 456777788877 556678889999998765 666544
No 322
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=64.51 E-value=9.2 Score=26.16 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=28.2
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
|+|.+|||++-.-- . . ..+.++.+.++..|+.++||.-.
T Consensus 45 F~~aPVVlDl~~l~-~--~---~dl~~L~~~l~~~gl~~vGV~g~ 83 (120)
T 3ghf_A 45 LKHAPVVINVSGLE-S--P---VNWPELHKIVTSTGLRIIGVSGC 83 (120)
T ss_dssp HTTCEEEEEEEECC-S--S---CCHHHHHHHHHTTTCEEEEEESC
T ss_pred hCCCcEEEEccccC-C--h---HHHHHHHHHHHHcCCEEEEEeCC
Confidence 58999999986432 1 1 24667777777788999999853
No 323
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=63.99 E-value=14 Score=31.98 Aligned_cols=36 Identities=17% Similarity=0.004 Sum_probs=25.2
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
+|+.+|+.++++++|++..........+.+...|++
T Consensus 202 gV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 202 GVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp TCCCSSEEEEEETTSCEEECCCSSCSHHHHHHHHTT
T ss_pred CCCCCCeEEEEeCCCceeecccccccHHHHHHHHHH
Confidence 899999999999999986554443333445555544
No 324
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=62.07 E-value=7.6 Score=26.47 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=27.9
Q ss_pred CEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCC
Q 027311 90 KLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 90 k~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~ 132 (225)
|.+++-|.-+-|+.|...-..| +++.++ ..++.|++-.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l----~~lede-Y~ilrVNIlS 39 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAV----EELKSE-YDILHVDILS 39 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHH----HTTTTT-EEEEEEECCC
T ss_pred CceEEEeCCCccHHHHHHHHHH----HHhhcc-ccEEEEEeee
Confidence 5788889999999999665555 455544 7788887643
No 325
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=58.50 E-value=3.7 Score=33.97 Aligned_cols=14 Identities=7% Similarity=0.287 Sum_probs=10.2
Q ss_pred EcccCCCCChHhHH
Q 027311 96 NVASQCGLTNSNYT 109 (225)
Q Consensus 96 F~~twC~~C~~~~~ 109 (225)
|..+|||.|.+...
T Consensus 266 Ysk~~CPyC~~Ak~ 279 (362)
T 2jad_A 266 ASKTYCPYSHAALN 279 (362)
T ss_dssp EECTTCHHHHHHHH
T ss_pred EEcCCCcchHHHHH
Confidence 66788998885543
No 326
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=58.42 E-value=39 Score=22.69 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=20.8
Q ss_pred ccCCC--CCh----HhHHHHHHHHHHHhcCCeEEEEEecCC
Q 027311 98 ASQCG--LTN----SNYTELSQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 98 ~twC~--~C~----~~~~~l~~l~~~~~~~~~~iv~Is~d~ 132 (225)
|-.|+ .|- .++-.+....+.++++|+.|-..++..
T Consensus 10 amCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~ 50 (110)
T 3kgk_A 10 AMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNLAQ 50 (110)
T ss_dssp C-------------CHHHHHHHHHHHHHHHTCCEEEEETTT
T ss_pred hhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEcccc
Confidence 44555 454 356677777777788889999888763
No 327
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=57.76 E-value=3.7 Score=28.02 Aligned_cols=50 Identities=10% Similarity=0.234 Sum_probs=31.6
Q ss_pred EEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCC
Q 027311 94 IVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (225)
Q Consensus 94 v~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (225)
..|..++|+.|++....|++ +|+.+-.+.+. .++.+.+++.+++ +..+.+
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~t~~eL~~~l-~~~g~~ 56 (119)
T 3f0i_A 7 VIYHNPKCSKSRETLALLEN-------QGIAPQVIKYL----ETSPSVEELKRLY-QQLGLN 56 (119)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECHH----HHCCCHHHHHHHH-HHHTCS
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCceEEEEec----cCcCcHHHHHHHH-HHcCCc
Confidence 34558899999987776654 33433334332 1234889999998 555654
No 328
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=57.29 E-value=26 Score=22.51 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=25.0
Q ss_pred CCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHH
Q 027311 77 AKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELS 112 (225)
Q Consensus 77 ~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~ 112 (225)
.+|..+.+-++++..+.|.+-+ -|..|....-+|+
T Consensus 25 ~dGGdvelv~v~~g~V~V~L~G-aC~gCpss~~TLk 59 (88)
T 1xhj_A 25 RDGGDCTLVDVEDGIVKLQLHG-ACGTCPSSTITLK 59 (88)
T ss_dssp HHSCEEEEEECCSSEEEEEEES-SCCSSCHHHHHHH
T ss_pred hcCCeEEEEEEECCEEEEEEee-cCCCCcchHHHHH
Confidence 3677888888877788887775 4667766665555
No 329
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=54.37 E-value=12 Score=32.89 Aligned_cols=21 Identities=14% Similarity=0.248 Sum_probs=14.8
Q ss_pred EEEEcccCCCCChHhHHHHHH
Q 027311 93 LIVNVASQCGLTNSNYTELSQ 113 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~ 113 (225)
++.|..+|||.|......|++
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 444788999999965555543
No 330
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=53.70 E-value=22 Score=22.03 Aligned_cols=42 Identities=14% Similarity=0.269 Sum_probs=28.1
Q ss_pred CCC-CeecCCccCCCEEEEEEcccCCCCChHhHHHHHH-HHHHHh
Q 027311 77 AKG-QDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQ-LYDKYK 119 (225)
Q Consensus 77 ~~G-~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~-l~~~~~ 119 (225)
.+| ..+.+-++++..+.|.+-.+ |..|......+++ +.++.+
T Consensus 22 ~dGGGdvelv~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~~~vp 65 (74)
T 1th5_A 22 GTGGGGLQFLMIKGPIVKVRLTGP-AAVVRTVRIAVSKKLREKIP 65 (74)
T ss_dssp TTTCCCCCCCEEETTEEEECCCSS-SSSSSSHHHHHHHHHHHHCT
T ss_pred hcCCCcEEEEEEeCCEEEEEEecC-CcchHHHHHHHHHHHHHHCC
Confidence 466 78888888777888878764 8899644445554 333443
No 331
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=53.11 E-value=19 Score=27.58 Aligned_cols=42 Identities=10% Similarity=0.237 Sum_probs=29.5
Q ss_pred CCEEEEEEcccCCCCChHhHHHHHHHHHHHhc-CCeEEEEEec
Q 027311 89 GKLLLIVNVASQCGLTNSNYTELSQLYDKYKN-QGLEILAFPC 130 (225)
Q Consensus 89 gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~-~~~~iv~Is~ 130 (225)
||..|-.|+-.-||.|-...+.|.++.+++++ .+++|.-.+.
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~ 43 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSF 43 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEEC
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEe
Confidence 45444444466999999999999999988763 3566665554
No 332
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=51.71 E-value=14 Score=28.31 Aligned_cols=33 Identities=6% Similarity=-0.198 Sum_probs=24.5
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
+|.++|+++| +|+ +...|..+.+.+.+.|++++
T Consensus 180 Gv~GvPtfvv---~g~--~~v~Ga~~~e~~~~~i~~~~ 212 (239)
T 3gl5_A 180 GATGVPFFVL---DRA--YGVSGAQPAEVFTQALTQAW 212 (239)
T ss_dssp TCCSSSEEEE---TTT--EEEESSCCHHHHHHHHHHHH
T ss_pred CCCeeCeEEE---CCc--EeecCCCCHHHHHHHHHHHH
Confidence 8999999655 355 23457778889999988875
No 333
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=51.05 E-value=52 Score=21.91 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=26.5
Q ss_pred cccCCC--CCh----HhHHHHHHHHHHHhcCCeEEEEEecCC
Q 027311 97 VASQCG--LTN----SNYTELSQLYDKYKNQGLEILAFPCNQ 132 (225)
Q Consensus 97 ~~twC~--~C~----~~~~~l~~l~~~~~~~~~~iv~Is~d~ 132 (225)
.|-.|+ .|- .++-.+....+.++++|+.|-..++..
T Consensus 12 pamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~ 53 (106)
T 3ktb_A 12 PAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRD 53 (106)
T ss_dssp CSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred hhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 366776 454 567777777888888899998888763
No 334
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=50.80 E-value=1.3e+02 Score=26.46 Aligned_cols=145 Identities=11% Similarity=0.075 Sum_probs=75.2
Q ss_pred cCCCceecCeEEeCC-CCCeecCCc-c--CCCEEEEEEcccCCCCCh-HhHHHHHHHH--------HHHhcC------Ce
Q 027311 63 SQSKTSVHDFSVKDA-KGQDVDLSI-Y--KGKLLLIVNVASQCGLTN-SNYTELSQLY--------DKYKNQ------GL 123 (225)
Q Consensus 63 ~~~g~~~p~f~l~~~-~G~~~~l~~-~--~gk~vlv~F~~twC~~C~-~~~~~l~~l~--------~~~~~~------~~ 123 (225)
..+|..+|+..+... +|+.+++.+ + .|+++|+.|-....+.+. ..+..+.+.. ..|... -+
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSIF 546 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEECCTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTTSSE
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEecCCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcCceE
Confidence 468999999998764 898888887 4 379999998654433343 3444444332 244321 26
Q ss_pred EEEEEecCCCCC-CCCCCHHHHHHHHHhhcCC-Cc-ceeeeecCC--C-CCchhhhhhccccCCCCCCCcccc-ceeEEE
Q 027311 124 EILAFPCNQFGA-QEPGDNEQIQEFACTRFKA-EF-PIFDKVDVN--G-DNAAPLYKHLKSSKGGLFGDSIKW-NFSKFL 196 (225)
Q Consensus 124 ~iv~Is~d~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~d~~--~-~~~~~~~~~~~~~~~~~~~~~v~~-~P~~~l 196 (225)
.++.|....... +-.+-++.++.+. .+++. .| .++ .|.. . ....+.| ++.. -...+|
T Consensus 547 ~~~~i~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~--~d~~~~~~~~~~~~~-------------g~~~~~g~~v~ 610 (639)
T 2dkh_A 547 DLRAVFPQAYTEVALETLPALLLPPK-GQLGMIDYEKVF--SPDLKNAGQDIFELR-------------GIDRQQGALVV 610 (639)
T ss_dssp EEEEECSSCGGGCCGGGSCGGGSCEE-TTTTEECCCSEE--ECCCSSTTCCHHHHT-------------TBCTTTCEEEE
T ss_pred EEEEEecCCCCccchhhCcHhhCCcc-cccccccceeEE--eCCCcccccchHHHh-------------CCCCCceEEEE
Confidence 777664210000 0000001111000 11121 22 233 2321 1 2233333 3322 246699
Q ss_pred ECCCCcEEEEcCCCCChhhHHHHHHhhh
Q 027311 197 VDKEGNVVERYAPTTSPLSIEVVLECLC 224 (225)
Q Consensus 197 id~~G~I~~~~~g~~~~~~l~~~l~~ll 224 (225)
|-|||.|-++.. ..+.+.+.+++...+
T Consensus 611 vRPD~yv~~~~~-~~~~~~l~~~~~~~~ 637 (639)
T 2dkh_A 611 VRPDQYVAQVLP-LGDHAALSAYFESFM 637 (639)
T ss_dssp ECTTSBEEEEEC-TTCHHHHHHHHHTTB
T ss_pred ECCCCceEEeec-hhhHHHHHHHHHHHh
Confidence 999999977654 234677888887654
No 335
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=50.15 E-value=1.1 Score=21.58 Aligned_cols=10 Identities=20% Similarity=0.418 Sum_probs=8.3
Q ss_pred CCCCChHhHH
Q 027311 100 QCGLTNSNYT 109 (225)
Q Consensus 100 wC~~C~~~~~ 109 (225)
-||.|+..||
T Consensus 8 qcpvcqq~mp 17 (29)
T 3vhs_A 8 QCPVCQQMMP 17 (29)
T ss_dssp ECTTTCCEEE
T ss_pred eChHHHHhCc
Confidence 6999998776
No 336
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=49.51 E-value=7.5 Score=28.52 Aligned_cols=31 Identities=10% Similarity=-0.008 Sum_probs=21.3
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHH
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVL 220 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l 220 (225)
||.++|+++| +|+.+....|..+.+++.+.|
T Consensus 151 GV~gtPtf~i---ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 151 GIHVSPTFMI---NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp TCCSSSEEEE---TTEECTTCCTTSCHHHHHHHH
T ss_pred CCCccCEEEE---CCEEccCCCCCCCHHHHHHHh
Confidence 8999999655 577643345666777777655
No 337
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=48.20 E-value=2.5 Score=22.11 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=14.0
Q ss_pred CCCCChHhHHHHHHHHHHHh
Q 027311 100 QCGLTNSNYTELSQLYDKYK 119 (225)
Q Consensus 100 wC~~C~~~~~~l~~l~~~~~ 119 (225)
-||.|.+.+..-.+|..-|.
T Consensus 7 iCP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp ECTTTCCEESSHHHHHHHHH
T ss_pred CCcHHHHHcCCHHHHHHHHH
Confidence 49999887776666655543
No 338
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=47.07 E-value=11 Score=17.88 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=12.6
Q ss_pred eEEEECCCCcEEEEc
Q 027311 193 SKFLVDKEGNVVERY 207 (225)
Q Consensus 193 ~~~lid~~G~I~~~~ 207 (225)
++.|.|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 458999999999875
No 339
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=45.12 E-value=48 Score=19.81 Aligned_cols=32 Identities=13% Similarity=0.101 Sum_probs=25.8
Q ss_pred eeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 192 FSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
...-|.+.+|+|+....+..+...-...|+.+
T Consensus 13 frfrLka~NGevI~sSe~Y~sk~~a~~gI~sV 44 (64)
T 3bid_A 13 YRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL 44 (64)
T ss_dssp EEEEEECTTSCEEEECCCBSCHHHHHHHHHHH
T ss_pred EEEEEEeCCCCEEEECCCcCCHHHHHHHHHHH
Confidence 46679999999999888888887777777665
No 340
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=41.45 E-value=24 Score=21.78 Aligned_cols=35 Identities=6% Similarity=0.169 Sum_probs=23.7
Q ss_pred ccCCCEEEE-EEcccCCCCChH------hHHHHHHHHHHHhc
Q 027311 86 IYKGKLLLI-VNVASQCGLTNS------NYTELSQLYDKYKN 120 (225)
Q Consensus 86 ~~~gk~vlv-~F~~twC~~C~~------~~~~l~~l~~~~~~ 120 (225)
+++|+.++| +..+.+|+.|-. ++..+.++..+++.
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 458887777 457889998853 45556666666654
No 341
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=39.78 E-value=45 Score=22.56 Aligned_cols=13 Identities=38% Similarity=0.708 Sum_probs=7.8
Q ss_pred cCCCCChHhHHHH
Q 027311 99 SQCGLTNSNYTEL 111 (225)
Q Consensus 99 twC~~C~~~~~~l 111 (225)
+.||.|.+....|
T Consensus 33 P~C~fc~~ak~lL 45 (118)
T 2wul_A 33 PQCGFSNAVVQIL 45 (118)
T ss_dssp BSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 3577777554444
No 342
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=37.85 E-value=18 Score=27.16 Aligned_cols=34 Identities=6% Similarity=-0.123 Sum_probs=22.2
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLEC 222 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~ 222 (225)
++.++|++ +||.+|.- ..+.|....+.+++.|.+
T Consensus 179 gv~G~Ptf-vv~~~g~~-~~~~G~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 179 GAFGLPTT-VAHVDGKT-YMLFGSDRMELLAYLLGE 212 (226)
T ss_dssp TCCSSCEE-EEEETTEE-EEEESTTCHHHHHHHHTC
T ss_pred CCCCCCEE-EEeCCCCc-CceeCCCcHHHHHHHhcC
Confidence 89999995 66666531 244566666677777653
No 343
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=36.36 E-value=36 Score=23.38 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=24.4
Q ss_pred ceeEEEECCCCcEEEEcC-CCCChhhHHHHHHh
Q 027311 191 NFSKFLVDKEGNVVERYA-PTTSPLSIEVVLEC 222 (225)
Q Consensus 191 ~P~~~lid~~G~I~~~~~-g~~~~~~l~~~l~~ 222 (225)
.|...+.|.+|.++.+.. ...+.+++.+.|..
T Consensus 62 ~P~LvLlD~~Ge~~E~I~IekW~tD~I~efL~e 94 (126)
T 2a4h_A 62 DPVVKLLDASGKVQETLSITKWNTDTVEEFFET 94 (126)
T ss_dssp CCEEEECCSSSCCSEEEECSSSSCSHHHHHHHH
T ss_pred CCEEEEecCCCCEeeEeccccCCHHHHHHHHHH
Confidence 489999999999776643 55667788887765
No 344
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=35.45 E-value=21 Score=26.25 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=22.2
Q ss_pred EEEEcccCCCCChHhHHHHHHHHHHHh
Q 027311 93 LIVNVASQCGLTNSNYTELSQLYDKYK 119 (225)
Q Consensus 93 lv~F~~twC~~C~~~~~~l~~l~~~~~ 119 (225)
|..|+-.-||.|....+.|.++.++++
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 444557799999999999999999885
No 345
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=34.36 E-value=23 Score=25.98 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=21.7
Q ss_pred ccccceeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 187 SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 187 ~v~~~P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
++.++|+++| +|+. +.|....+.+++.|++.
T Consensus 164 Gv~G~Ptfvi---~g~~---~~G~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 164 KVFGVPTMFL---GDEM---WWGNDRLFMLESAMGRL 194 (203)
T ss_dssp TCCSSSEEEE---TTEE---EESGGGHHHHHHHHHHH
T ss_pred CCCcCCEEEE---CCEE---EECCCCHHHHHHHHhcc
Confidence 8999999655 4653 45656677788877764
No 346
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=31.00 E-value=37 Score=26.26 Aligned_cols=11 Identities=18% Similarity=0.446 Sum_probs=7.5
Q ss_pred CccCCCEEEEE
Q 027311 85 SIYKGKLLLIV 95 (225)
Q Consensus 85 ~~~~gk~vlv~ 95 (225)
.+++||++||.
T Consensus 3 ~sL~gKvalVT 13 (254)
T 4fn4_A 3 QSLKNKVVIVT 13 (254)
T ss_dssp GGGTTCEEEEE
T ss_pred CCCCCCEEEEe
Confidence 45677877773
No 347
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=29.01 E-value=1.8e+02 Score=24.66 Aligned_cols=43 Identities=19% Similarity=0.228 Sum_probs=23.9
Q ss_pred CeEEEEEecCCCCC-----CCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 122 GLEILAFPCNQFGA-----QEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 122 ~~~iv~Is~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
|++++.++.+..+. +.+...+.+.+.+ ++.+.++-+. .|.+++
T Consensus 218 G~~v~~l~~~pDg~f~n~~~~~~~~~~l~~~v-~~~~adlgia--~DgDaD 265 (469)
T 3pdk_A 218 EADISTMGTSPNGMNINDGVGSTHPEVLAELV-KEKGADIGLA--FDGDGD 265 (469)
T ss_dssp TCEEEEESCCCCSSCTTSSCSTTSTHHHHHHH-HHHTCSEEEE--ECTTSS
T ss_pred CCEEEEECCCcCCCCCCCCCCCCCHHHHHHHH-HhcCCcEEEE--ECCCCC
Confidence 46777776543221 2334566777776 5556666555 454444
No 348
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=28.62 E-value=2e+02 Score=24.03 Aligned_cols=43 Identities=21% Similarity=0.269 Sum_probs=23.6
Q ss_pred CeEEEEEecCCCC-----CCCCCCHHHHHHHHHhhcCCCcceeeeecCCCC
Q 027311 122 GLEILAFPCNQFG-----AQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGD 167 (225)
Q Consensus 122 ~~~iv~Is~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 167 (225)
|++++.++.+..+ .+.+...+.+.+.. .+.+.++-+. .|.+++
T Consensus 196 G~~v~~~~~~pDg~f~n~~~~~~~~~~l~~~v-~~~~adlgia--~DgDaD 243 (443)
T 3i3w_A 196 GINYVSIASNPDGLNINVGCGATCVSNIKKAV-KEQKADLGIS--LDGDAD 243 (443)
T ss_dssp TCEEEESSCCCCSSCTTTTCSTTCHHHHHHHH-HHHTCSEEEE--ECTTSC
T ss_pred CCEEEEECCccCCCCCCCCCCCCCHHHHHHHH-HhcCCcEEEE--ECCCCc
Confidence 4677766654322 22344567777766 5556666555 454444
No 349
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=28.39 E-value=1.1e+02 Score=20.62 Aligned_cols=32 Identities=6% Similarity=-0.071 Sum_probs=25.9
Q ss_pred eeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 192 FSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
|...|.+.+|.|++...+..+....+.-|+.+
T Consensus 66 ~yF~Lka~NgqvIg~Se~Y~s~~~~~~gI~sV 97 (118)
T 2k49_A 66 PYFNLKAANHQIIGTSQMYSSTAARDNGIKSV 97 (118)
T ss_dssp EEEEEECTTCCEEEEBCCCSSHHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEcCCcCCHHHHHHHHHHH
Confidence 56689999999999987777777777777665
No 350
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=28.31 E-value=48 Score=22.35 Aligned_cols=35 Identities=9% Similarity=0.102 Sum_probs=18.1
Q ss_pred cCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEE
Q 027311 87 YKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEIL 126 (225)
Q Consensus 87 ~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv 126 (225)
++||++.+.--..|. .|. .+.++.+.+++.|..++
T Consensus 77 l~~k~~~~f~t~g~~-~~~----a~~~l~~~l~~~G~~~v 111 (138)
T 5nul_A 77 ISGKKVALFGSYGWG-DGK----WMRDFEERMNGYGCVVV 111 (138)
T ss_dssp CTTCEEEEEEEESSS-CSH----HHHHHHHHHHHTTCEEC
T ss_pred cCCCEEEEEEecCCC-CCh----HHHHHHHHHHHCCCEEE
Confidence 567776664444453 353 23444444455555555
No 351
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=26.43 E-value=34 Score=22.63 Aligned_cols=15 Identities=27% Similarity=0.410 Sum_probs=12.9
Q ss_pred eEEEECCCCcEEEEc
Q 027311 193 SKFLVDKEGNVVERY 207 (225)
Q Consensus 193 ~~~lid~~G~I~~~~ 207 (225)
.+.|||++|+|++--
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 568999999999865
No 352
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=26.05 E-value=2.7e+02 Score=22.77 Aligned_cols=43 Identities=16% Similarity=0.345 Sum_probs=30.8
Q ss_pred hHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCCc
Q 027311 105 NSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEF 156 (225)
Q Consensus 105 ~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (225)
.+..|.+.++.+.++..|+.++-||-. ..+-++.++ ++.++.|
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg--------~~~~v~~ia-~~lg~~y 262 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSAS--------FIDIVRAFA-TDTNNNY 262 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHH-HCTTSSC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCC--------cHHHHHHHH-HHhCccc
Confidence 456789999999999999999999864 334444444 6555444
No 353
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=25.89 E-value=31 Score=25.84 Aligned_cols=36 Identities=8% Similarity=0.076 Sum_probs=25.6
Q ss_pred EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEe
Q 027311 91 LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (225)
Q Consensus 91 ~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is 129 (225)
..|..|+-.-||.|-...+.|+++.+++ +++|.--+
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~p 41 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLRP 41 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 3455566779999999999999987665 35554433
No 354
>2kii_A Putative uncharacterized protein; H-NOX, unknown function; HET: HEM; NMR {Shewanella oneidensis} PDB: 2kil_A*
Probab=25.45 E-value=1.8e+02 Score=20.98 Aligned_cols=54 Identities=9% Similarity=-0.006 Sum_probs=40.2
Q ss_pred CCCceecCeEEeCCCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEe
Q 027311 64 QSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFP 129 (225)
Q Consensus 64 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is 129 (225)
-++..+|.|.....+.+ -+++.+.+..| .|.-....++...+.|+ ..+.|--+.
T Consensus 110 yp~~~~Psf~~~~~~~~----------~l~l~Y~S~R~-l~~~~~Gli~~~A~~f~-~~v~i~~~~ 163 (181)
T 2kii_A 110 YHEPSLPHINGQLLPNN----------QIALRYSSPRR-LCFCAEGLLFGAAQHFQ-QKIQISHDT 163 (181)
T ss_dssp SSCSCCCEEEEEECSSS----------EEEEEEECTTC-CHHHHHHHHHHHHHHTT-CCEEEEEEE
T ss_pred CCCCCCCeeEEEECCCC----------EEEEEEecCCC-hHHHHHHHHHHHHHHhC-CCeEEEEEe
Confidence 47788999988765332 45577778887 99988999999999994 447666444
No 355
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=25.40 E-value=1.4e+02 Score=19.05 Aligned_cols=26 Identities=27% Similarity=0.247 Sum_probs=17.2
Q ss_pred CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCC
Q 027311 121 QGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAE 155 (225)
Q Consensus 121 ~~~~iv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (225)
.++.-+++.++ +.+++.+.+ ++.|..
T Consensus 80 ~g~~~~~~~v~--------d~~~~~~~l-~~~G~~ 105 (134)
T 3l7t_A 80 CGLRHLAFYVE--------DVEASRQEL-IALGIR 105 (134)
T ss_dssp SEEEEEEEECS--------CHHHHHHHH-HHHTCC
T ss_pred CCeEEEEEEEC--------CHHHHHHHH-HhCCCc
Confidence 35677888877 677777777 444554
No 356
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=25.32 E-value=3.1e+02 Score=23.17 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=62.9
Q ss_pred cccCCCceecCeEEeCCCCCeecCCccCCC-EEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecCCCCCCCCC
Q 027311 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGK-LLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPG 139 (225)
Q Consensus 61 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk-~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d~~~~~~~~ 139 (225)
....+|..+|+.-+.. +|+.+++-|+-|+ .+|+.+-.. ..-.....+..++++- .+.++.|..
T Consensus 418 ~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~--------- 481 (535)
T 3ihg_A 418 PSGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLAGELG-----ADWVAAAEAVSAELGV-PVRAYRVGA--------- 481 (535)
T ss_dssp CCCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEECTTC-----HHHHHHHHHHHHHHTC-CEEEEEBTT---------
T ss_pred CCCCCCCcCCCceeec-CCceeeHHHhcCCceEEEecCCc-----cHHHHHHHHHHHhcCC-ceEEEEeCC---------
Confidence 4467999999998853 5777777776454 788865321 1001122233344432 256655521
Q ss_pred CHHHHHHHHHhhcCCCcceeeeecCCCCCchhhhhhccccCCCCCCCccccceeEEEECCCCcEEEEcCCCC--ChhhHH
Q 027311 140 DNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTT--SPLSIE 217 (225)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~I~~~~~g~~--~~~~l~ 217 (225)
. + .|..+. ..+.|+ +. --..+||-|||.|-++..... ....|.
T Consensus 482 ~------------------~--~d~~~~-~~~~~~-------------~~-~~~~~lvRPD~~va~r~~~~~~~~~~~l~ 526 (535)
T 3ihg_A 482 G------------------L--TDPESA-VSERYG-------------IG-KAGASLVRPDGIVAWRTDEAAADAAQTLE 526 (535)
T ss_dssp T------------------B--BCSSCC-HHHHHT-------------CT-TTCEEEECTTSBEEEEESSCCSSHHHHHH
T ss_pred c------------------c--ccCcch-HHHHhC-------------CC-CCceEeeCCCceeEEecCCCCCCHHHHHH
Confidence 0 1 233322 233331 11 014599999999999977532 234688
Q ss_pred HHHHhhh
Q 027311 218 VVLECLC 224 (225)
Q Consensus 218 ~~l~~ll 224 (225)
+.+.++|
T Consensus 527 ~~~~~~l 533 (535)
T 3ihg_A 527 GVLRRVL 533 (535)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8887776
No 357
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=23.91 E-value=1e+02 Score=18.13 Aligned_cols=32 Identities=6% Similarity=-0.151 Sum_probs=21.2
Q ss_pred eeEEEECCCCcEEEEcC----CCCChhhHHHHHHhh
Q 027311 192 FSKFLVDKEGNVVERYA----PTTSPLSIEVVLECL 223 (225)
Q Consensus 192 P~~~lid~~G~I~~~~~----g~~~~~~l~~~l~~l 223 (225)
|..+-||++|.+..... ...+.+++...|+++
T Consensus 4 ~i~v~I~~dG~~~~~~~~~~~~~v~~~~L~~~l~~~ 39 (74)
T 2jwk_A 4 PVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQE 39 (74)
T ss_dssp CEEEEECSSSCEEEEETTEEEEEECHHHHHHHHHHH
T ss_pred CEEEEEecCccEEEecCCCcCcccCHHHHHHHHHHH
Confidence 56688999998755421 234567777777665
No 358
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=23.41 E-value=1.5e+02 Score=20.98 Aligned_cols=68 Identities=19% Similarity=0.320 Sum_probs=38.9
Q ss_pred CCCCeecCCccCCCEEEEEEcccCCCCChHhHHHHH-----HHHHHHhcCCeEEEEEecCCCCCCCCCCHHHHHHHH
Q 027311 77 AKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELS-----QLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFA 148 (225)
Q Consensus 77 ~~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~-----~l~~~~~~~~~~iv~Is~d~~~~~~~~~~~~~~~~~ 148 (225)
.+|..+.+-++.|..+.|.+-+ .|..|....-+++ .+.+..++- ..+..+.-.. ...+-+.+.+.+.+
T Consensus 22 ~dGGdvelv~v~~~~V~v~l~G-aC~gC~ss~~Tlk~~Ie~~L~~~vpev-~~V~~v~~~~--e~l~L~~~~v~~~L 94 (154)
T 2z51_A 22 SDGGNVALHEIDGNVVRVKLQG-ACGSCPSSTMTMKMGIERRLMEKIPEI-VAVEALPDEE--TGLELNEENIEKVL 94 (154)
T ss_dssp HTTEEEEEEEEETTEEEEEEEH-HHHTCHHHHHHHHHHHHHHHHHHCTTC-CEEEECCSSC--CSCCSSHHHHHHHH
T ss_pred hcCCeEEEEEEECCEEEEEEEC-CCCCCCccHhHHHHHHHHHHHHhCCCc-eEEEEccCch--hhhHHHHHHHHHHH
Confidence 3677788888777777777754 5677776665555 234344332 4555553211 11233556666665
No 359
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=23.21 E-value=93 Score=21.82 Aligned_cols=34 Identities=21% Similarity=-0.017 Sum_probs=22.7
Q ss_pred cceeEEEECCCCcEEEEcC----CCCChhhHHHHHHhhh
Q 027311 190 WNFSKFLVDKEGNVVERYA----PTTSPLSIEVVLECLC 224 (225)
Q Consensus 190 ~~P~~~lid~~G~I~~~~~----g~~~~~~l~~~l~~ll 224 (225)
+.|..-|+ ++|++++... ...+++.+.+.|....
T Consensus 106 SSPS~ALf-KdGelVh~ieRh~IEGr~a~~Ia~~L~~af 143 (147)
T 3fhk_A 106 SSPSMALL-KGKEVVHFIPRHEIEGHDMEEIMKNLTAAF 143 (147)
T ss_dssp CSSEEEEE-ETTEEEEEECGGGTTTSCHHHHHHHHHHHH
T ss_pred CCchheee-eCCEEEEEeehhhcCCCCHHHHHHHHHHHH
Confidence 35777777 9999998632 2335667777776543
No 360
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=23.09 E-value=1.9e+02 Score=21.11 Aligned_cols=61 Identities=16% Similarity=0.167 Sum_probs=36.1
Q ss_pred CceecCe-EEeCCCCCeecCCcc----CCCEEEEEEcccCCCCChHhHHHHHHHHHHHhcCCeEEEEEecC
Q 027311 66 KTSVHDF-SVKDAKGQDVDLSIY----KGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCN 131 (225)
Q Consensus 66 g~~~p~f-~l~~~~G~~~~l~~~----~gk~vlv~F~~twC~~C~~~~~~l~~l~~~~~~~~~~iv~Is~d 131 (225)
+.+..++ .+.+.+|..+....+ +++++||.+.+..+. +. .+..+.+.+.++|+.++.+..-
T Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~-~~----~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 13 SIPYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEH-SG----RYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp SCBGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCC-GG----GGHHHHHHHHHTTEEEEEECCT
T ss_pred CcccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCch-hh----HHHHHHHHHHhCCCcEEEeCCC
Confidence 3344455 677778877665443 346788877654332 11 2334555555667999988753
No 361
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=22.31 E-value=43 Score=21.64 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=24.6
Q ss_pred CCCeecCCccCCCEEEEEEcccCCCCChHhHHHHH
Q 027311 78 KGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELS 112 (225)
Q Consensus 78 ~G~~~~l~~~~gk~vlv~F~~twC~~C~~~~~~l~ 112 (225)
+|..+.+-++++..+.|.|-+ -|..|....-+|+
T Consensus 33 dGGdvelv~v~~g~V~v~l~G-aC~gC~ss~~Tlk 66 (92)
T 1veh_A 33 DGGDVIYRGFEDGIVRLKLQG-SCTSCPSSIITLK 66 (92)
T ss_dssp HSCCCCEEEEETTEEEECCCC-CCCCCHHHHHHTH
T ss_pred cCCeEEEEEEeCCEEEEEEee-cCCCCCCcHHHHH
Confidence 677777877777777777754 5778887666666
No 362
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=21.96 E-value=1.5e+02 Score=20.42 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=24.9
Q ss_pred eeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 192 FSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
+...|.+.+|.|++...+..+....+..|+.+
T Consensus 82 ~~f~Lka~NgqvIa~Se~Y~ska~a~~gI~sV 113 (130)
T 2k8e_A 82 FYFNLKAANHQIIGSSQMYATAQSRETGIASV 113 (130)
T ss_dssp EEEEEECTTSCEEEECCCBSSHHHHHHHHHHH
T ss_pred EEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHH
Confidence 45579999999999887777777777766654
No 363
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=21.93 E-value=27 Score=30.48 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=29.1
Q ss_pred ccCCCceecCeEEeCCCCCeecCCcc--CCCEEEEEEcc
Q 027311 62 ASQSKTSVHDFSVKDAKGQDVDLSIY--KGKLLLIVNVA 98 (225)
Q Consensus 62 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~F~~ 98 (225)
...+|..+||+.+.+.+|.+..|.++ .|+++|+.|-.
T Consensus 444 ~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~ 482 (570)
T 3fmw_A 444 HPWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAG 482 (570)
T ss_dssp CSSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSC
T ss_pred CccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecC
Confidence 35689999999998778876777764 47899998853
No 364
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=21.74 E-value=97 Score=21.38 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=23.8
Q ss_pred ceeEEEECCCCcEEEE-cCCCCChhhHHHHHHh
Q 027311 191 NFSKFLVDKEGNVVER-YAPTTSPLSIEVVLEC 222 (225)
Q Consensus 191 ~P~~~lid~~G~I~~~-~~g~~~~~~l~~~l~~ 222 (225)
.|..++.|.+|+++.+ .....+.+++.+.|..
T Consensus 56 ~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 56 DPELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CCEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CCEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 4888999999997655 3345577788887764
No 365
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=21.50 E-value=53 Score=22.94 Aligned_cols=16 Identities=31% Similarity=0.382 Sum_probs=13.4
Q ss_pred eeEEEECCCCcEEEEc
Q 027311 192 FSKFLVDKEGNVVERY 207 (225)
Q Consensus 192 P~~~lid~~G~I~~~~ 207 (225)
|..||+|.+|+|+...
T Consensus 56 ~r~~l~d~eG~Il~~~ 71 (138)
T 3v67_A 56 PRVFFSDYNGNVLTTD 71 (138)
T ss_dssp CEEEEECTTSCEECCC
T ss_pred ccEEEEcCCCCEecCC
Confidence 5789999999998653
No 366
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=20.36 E-value=2.1e+02 Score=19.52 Aligned_cols=18 Identities=17% Similarity=0.313 Sum_probs=13.2
Q ss_pred eEEEECCCCcEEEEcCCC
Q 027311 193 SKFLVDKEGNVVERYAPT 210 (225)
Q Consensus 193 ~~~lid~~G~I~~~~~g~ 210 (225)
..++.||+|+.+......
T Consensus 128 ~~~~~DPdG~~iel~~~~ 145 (164)
T 3m2o_A 128 HFITADPNGVLIDIIKPI 145 (164)
T ss_dssp EEEEECTTCCEEEEEC--
T ss_pred EEEEECCCCCEEEEEEEC
Confidence 458999999998776543
No 367
>2k7i_A UPF0339 protein ATU0232; protein of unknown function, swapped dimer. PSI2, structural genomics, unknown function; NMR {Agrobacterium tumefaciens str} SCOP: d.348.1.1
Probab=20.01 E-value=1.3e+02 Score=19.05 Aligned_cols=32 Identities=9% Similarity=0.049 Sum_probs=24.7
Q ss_pred eeEEEECCCCcEEEEcCCCCChhhHHHHHHhh
Q 027311 192 FSKFLVDKEGNVVERYAPTTSPLSIEVVLECL 223 (225)
Q Consensus 192 P~~~lid~~G~I~~~~~g~~~~~~l~~~l~~l 223 (225)
+...|...||.|+....+..+...-+.-|+.+
T Consensus 35 ~rFrLkA~NGevIasSe~Y~sk~~a~~GIeSV 66 (83)
T 2k7i_A 35 YRFRFKASNGETMFSSEGYKAKASAIHAIESI 66 (83)
T ss_dssp EEEEECCTTSCCCEEBCCSSSHHHHHHHHHHH
T ss_pred EEEEEEECCCCEEEECCCcCCHHHHHHHHHHH
Confidence 46689999999999877777777666666554
Done!