BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027313
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9 OS=Arabidopsis thaliana GN=HMGB9
PE=2 SV=1
Length = 338
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/111 (80%), Positives = 93/111 (83%)
Query: 18 KLYPAPLSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGY 77
K YP PL+ HE V KD VFWDTLRRFH IM TKFMIPVIGGKELDLHVLYVE T RGGY
Sbjct: 25 KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84
Query: 78 EKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYEQVHFFKMQGP 128
EKVV EKKWREVG VF+FS TTTSASFVLRKHYL LL+HYEQVH F +GP
Sbjct: 85 EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGP 135
>sp|Q9MAT6|HMG15_ARATH High mobility group B protein 15 OS=Arabidopsis thaliana GN=HMGB15
PE=2 SV=1
Length = 448
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 104/168 (61%), Gaps = 18/168 (10%)
Query: 4 SSAAKTKGRSVVEDKLYPAPLSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELD 63
+S++ K SV + + P +++E V DP +F +L R H ++GTKFM+P+IGG++LD
Sbjct: 2 ASSSCLKQGSVPMNNVCVTPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLD 61
Query: 64 LHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYEQVHFF 123
LH L+VE T+RGG K++ E++W+EV A F F PT T+AS+VLRK+Y +LL +YEQ++FF
Sbjct: 62 LHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFF 121
Query: 124 K---------MQGP---PCV------PSGKFEFLLVQQYLRVTCSEFF 153
+ MQ P PC PS + + L ++ +EF
Sbjct: 122 RSNGQIPPDSMQSPSARPCFIQGAIRPSQELQALTFTPQPKINTAEFL 169
>sp|Q9LG02|HMG11_ARATH Putative high mobility group B protein 11 OS=Arabidopsis thaliana
GN=HMGB11 PE=3 SV=2
Length = 337
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 27 HEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKW 86
++D+ ++P +FW+ LR FH KF IP++GGK LDLH L+ E T+RGG EKV+ +++
Sbjct: 30 YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89
Query: 87 REVGAVFKFSPTTTSASFVLRKHYLTLLYHYEQVHFFKMQGP 128
+EV F F T T+++FVLRK YL +L+ +E +++F Q P
Sbjct: 90 KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF--QAP 129
>sp|Q9LTT3|HMG10_ARATH High mobility group B protein 10 OS=Arabidopsis thaliana GN=HMGB10
PE=2 SV=1
Length = 319
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 16 EDKLYPAPLSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRG 75
+D PA ++D+ ++ +FW+ LR F + +P +GG LDLH L++E T+RG
Sbjct: 28 DDSSVPA---KYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRG 84
Query: 76 GYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYEQVHFFK 124
G E+VV ++KW+EV F F T TSASFVLRK+YL L+ E V++ +
Sbjct: 85 GIERVVKDRKWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLE 133
>sp|Q68CP9|ARID2_HUMAN AT-rich interactive domain-containing protein 2 OS=Homo sapiens
GN=ARID2 PE=1 SV=2
Length = 1835
Score = 88.6 bits (218), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 29 DVSKDPIVFWDTLRRFHFIMGTKFM-IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWR 87
D + + F D LR+FH G+ F IP +GGKELDLH LY TT GG+ KV + +W
Sbjct: 11 DERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWG 70
Query: 88 EVGAVFKFSPTTTSASFVLRKHYLTLLYHYEQVHFF 123
E+ F F + ++A+F L+++YL L YE+VH F
Sbjct: 71 EIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHF 106
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 63.9 bits (154), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 24 LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAE 83
L+ E +++ + F D L +F + G+ IPV+ K LDL+ L ++GG+E V E
Sbjct: 77 LNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEMVTKE 136
Query: 84 KKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
KKW +VG+ + P + S +L+ HY +LY YE
Sbjct: 137 KKWSKVGSRLGYLPGKGTGS-LLKSHYERILYPYE 170
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 24 LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAE 83
L+ E +++ + F D L +F + G+ IPV+ K LDL+ L ++GG+E V E
Sbjct: 77 LNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEIVTKE 136
Query: 84 KKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
KKW +VG+ + P + S +L+ HY +LY YE
Sbjct: 137 KKWSKVGSRLGYLPGKGTGS-LLKSHYERILYPYE 170
>sp|Q5XGD9|ARI3A_XENTR AT-rich interactive domain-containing protein 3A OS=Xenopus
tropicalis GN=arid3a PE=2 SV=1
Length = 541
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKFM-IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT IP++ + LDL++LYV T +GG +V+ +K WRE+
Sbjct: 218 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNL 277
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
+ TSA+F LR Y+ LY YE
Sbjct: 278 PTSITSAAFTLRTQYMKYLYPYE 300
>sp|Q6GQD7|ARI3A_XENLA AT-rich interactive domain-containing protein 3A OS=Xenopus laevis
GN=arid3a PE=2 SV=1
Length = 539
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKFM-IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT IP++ + LDL++LYV T +GG +V+ +K WRE+
Sbjct: 215 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNL 274
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
+ TSA+F LR Y+ LY YE
Sbjct: 275 PTSITSAAFTLRTQYMKYLYPYE 297
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 17 DKLYPAP----LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEAT 72
DKL P L+ E ++ + F D + +F + G+ IP++ K LDL+ L+
Sbjct: 208 DKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQ 267
Query: 73 TRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYEQVHFFKMQGPPCVP 132
GG E+ ++KW +V ++ P++ S L+ HY +L+ +E K+ GP
Sbjct: 268 EEGGMEQTTKDRKWAKVANRMQY-PSSKSVGATLKAHYERILHPFEVYTSGKVLGPTPTS 326
Query: 133 SG 134
SG
Sbjct: 327 SG 328
>sp|Q8IVW6|ARI3B_HUMAN AT-rich interactive domain-containing protein 3B OS=Homo sapiens
GN=ARID3B PE=1 SV=2
Length = 561
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 10 KGRSVVED--KLYPAPLSSHEDVSKDP--IVFWDTLRRFHFIMGTKF-MIPVIGGKELDL 64
+GR + D KLY ++ DP F D L F GT IP++ + LDL
Sbjct: 198 RGREISRDFAKLY--------ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDL 249
Query: 65 HVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
++LY T +GG +++ +K WRE+ + TSA+F LR Y+ LY YE
Sbjct: 250 YMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYE 303
>sp|A2BEA6|ARI3A_DANRE AT-rich interactive domain-containing protein 3A OS=Danio rerio
GN=arid3a PE=1 SV=1
Length = 570
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKFM-IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT IP++ + LDL+ LY T +GG +V+ +K WRE+
Sbjct: 238 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLYTLYKLVTEKGGLVEVINKKIWREITKGLNL 297
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
+ TSA+F LR Y+ LY YE
Sbjct: 298 PTSITSAAFTLRTQYMKYLYPYE 320
>sp|Q99856|ARI3A_HUMAN AT-rich interactive domain-containing protein 3A OS=Homo sapiens
GN=ARID3A PE=1 SV=2
Length = 593
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKFM-IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT IP++ + LDL +LYV T +GG +V+ +K WRE+
Sbjct: 244 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 303
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
+ TSA+F LR Y+ LY YE
Sbjct: 304 PTSITSAAFTLRTQYMKYLYPYE 326
>sp|A6NKF2|ARI3C_HUMAN AT-rich interactive domain-containing protein 3C OS=Homo sapiens
GN=ARID3C PE=2 SV=1
Length = 412
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKF-MIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT +P++ + LDL+ L+ T +GG +V+ K WREV
Sbjct: 119 FLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSL 178
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
T TSA+F LR Y+ LY YE
Sbjct: 179 PTTITSAAFTLRTQYMKYLYPYE 201
>sp|Q9Z1N7|ARI3B_MOUSE AT-rich interactive domain-containing protein 3B OS=Mus musculus
GN=Arid3b PE=2 SV=1
Length = 568
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 10 KGRSVVED--KLYPAPLSSHEDVSKDP--IVFWDTLRRFHFIMGTKF-MIPVIGGKELDL 64
+GR + D KLY ++ DP F D L F GT IP++ + LDL
Sbjct: 196 RGREISRDFAKLY--------ELDGDPERKEFLDDLFIFMQKRGTPINRIPIMAKQILDL 247
Query: 65 HVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
++LY T +GG +++ +K WRE+ + TSA+F LR Y+ LY YE
Sbjct: 248 YMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYE 301
>sp|Q62431|ARI3A_MOUSE AT-rich interactive domain-containing protein 3A OS=Mus musculus
GN=Arid3a PE=1 SV=1
Length = 601
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKFM-IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT IP++ + LDL +LYV T +GG +V+ +K WRE+
Sbjct: 249 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 308
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
+ TSA+F LR Y+ LY YE
Sbjct: 309 PTSITSAAFTLRTQYMKYLYPYE 331
>sp|A6PWV5|ARI3C_MOUSE AT-rich interactive domain-containing protein 3C OS=Mus musculus
GN=Arid3c PE=2 SV=2
Length = 409
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKF-MIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT +P++ + LDL+ L+ T +GG +V+ K WREV
Sbjct: 116 FLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSL 175
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
T TSA+F LR Y+ LY YE
Sbjct: 176 PTTITSAAFTLRTQYMKYLYPYE 198
>sp|Q8MQH7|DRI_STRPU Protein dead ringer homolog OS=Strongylocentrotus purpuratus GN=dri
PE=2 SV=1
Length = 490
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKF-MIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L + GT IP++ + LDL+ LY +GG +V+ +K+WRE+
Sbjct: 208 FLDDLFSYMQKRGTPVNRIPIMAKQVLDLYELYNLVVAKGGLVEVINKKQWREITKGLNL 267
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
+ TSA+F LR Y+ LY YE
Sbjct: 268 PASITSAAFTLRTQYMKYLYPYE 290
>sp|Q24573|DRI_DROME Protein dead ringer OS=Drosophila melanogaster GN=retn PE=1 SV=2
Length = 911
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 29 DVSKDPI--VFWDTLRRFHFIMGTKF-MIPVIGGKELDLHVLYVEATTRGGYEKVVAEKK 85
+++ DP F D L F GT +P++ LDL+ LY RGG V+ +K
Sbjct: 289 EINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKL 348
Query: 86 WREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
W+E+ + TSA+F LR Y+ LY YE
Sbjct: 349 WQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYE 381
>sp|Q5ZJ69|ARI5B_CHICK AT-rich interactive domain-containing protein 5B OS=Gallus gallus
GN=ARID5B PE=2 SV=1
Length = 1185
Score = 52.0 bits (123), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
IP +G K+++L ++ A GGYE + A ++W+ + +P +TSA+ R+HY L
Sbjct: 345 IPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERL 404
Query: 114 LYHYEQVHFFKMQG----PPCVP 132
+ YE+ F K + PP P
Sbjct: 405 ILPYER--FIKGEEDKPLPPVKP 425
>sp|Q8BM75|ARI5B_MOUSE AT-rich interactive domain-containing protein 5B OS=Mus musculus
GN=Arid5b PE=1 SV=3
Length = 1188
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
IP +G K+++L ++ A GGYE + A ++W+ + +P +TSA+ R+HY L
Sbjct: 343 IPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERL 402
Query: 114 LYHYEQVHFFKMQG----PPCVP 132
+ YE+ F K + PP P
Sbjct: 403 ILPYER--FIKGEEDKPLPPIKP 423
>sp|Q14865|ARI5B_HUMAN AT-rich interactive domain-containing protein 5B OS=Homo sapiens
GN=ARID5B PE=1 SV=3
Length = 1188
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
IP +G K+++L ++ A GGYE + A ++W+ + +P +TSA+ R+HY L
Sbjct: 342 IPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERL 401
Query: 114 LYHYEQVHFFKMQG----PPCVP 132
+ YE+ F K + PP P
Sbjct: 402 ILPYER--FIKGEEDKPLPPIKP 422
>sp|E2R9X2|ARI5B_CANFA AT-rich interactive domain-containing protein 5B OS=Canis
familiaris GN=ARID5B PE=3 SV=1
Length = 1187
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
IP +G K+++L ++ A GGYE + A ++W+ + +P +TSA+ R+HY L
Sbjct: 343 IPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERL 402
Query: 114 LYHYEQVHFFKMQG----PPCVP 132
+ YE+ F K + PP P
Sbjct: 403 ILPYER--FIKGEEDKPLPPIKP 423
>sp|E1BLP6|ARI5B_BOVIN AT-rich interactive domain-containing protein 5B OS=Bos taurus
GN=ARID5B PE=3 SV=1
Length = 1173
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
IP +G K+++L ++ A GGYE + A ++W+ + +P +TSA+ R+HY L
Sbjct: 346 IPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERL 405
Query: 114 LYHYEQVHFFKMQG----PPCVP 132
+ YE+ F K + PP P
Sbjct: 406 ILPYER--FIKGEEDKPLPPIKP 426
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 37 FWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFS 96
+ D + +F I G+ IP + K LDL+ L GGYE + +++W V +
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVMEEGGYEAICKDRRWARVAQRLNY- 143
Query: 97 PTTTSASFVLRKHYLTLLYHYE 118
P+ + +LR HY ++Y YE
Sbjct: 144 PSGKNIGSLLRSHYERIIYPYE 165
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 37 FWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFS 96
+ D + +F I G+ IP + K LDL+ L GGYE + +++W V +
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYP 144
Query: 97 PTTTSASFVLRKHYLTLLYHYE 118
P S LR HY ++Y YE
Sbjct: 145 PGKNIGSL-LRSHYERIIYPYE 165
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 37 FWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFS 96
+ D + +F I G+ IP + K LDL+ L GGYE + +++W V +
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYP 144
Query: 97 PTTTSASFVLRKHYLTLLYHYE 118
P S LR HY ++Y YE
Sbjct: 145 PGKNIGSL-LRSHYERIIYPYE 165
>sp|E7F888|ARI5B_DANRE AT-rich interactive domain-containing protein 5B OS=Danio rerio
GN=arid5b PE=3 SV=1
Length = 1044
Score = 51.6 bits (122), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
IP +G K+++L ++ A GGYE + A ++W+ V +P +TSA+ R+HY L
Sbjct: 236 IPYLGFKQINLWTMFQAAQKLGGYEVITARRQWKNVYDELGGNPGSTSAATCTRRHYERL 295
Query: 114 LYHYEQVHFFKMQGPPCVPSGK 135
+ YE+ F K + +P K
Sbjct: 296 ILPYER--FTKGEEDKPLPPAK 315
>sp|Q4H3P5|DRI_CIOIN Protein dead ringer homolog OS=Ciona intestinalis GN=Ci-DRIL1/2
PE=2 SV=1
Length = 571
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 37 FWDTLRRFHFIMGTKFM-IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F D L F GT IP++ + LDL+ LY +GG +V+ +K WRE+
Sbjct: 255 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLYQLYRLVVEKGGLVEVINKKIWREITKGLNL 314
Query: 96 SPTTTSASFVLRKHYLTLLYHYE 118
+ TSA+F LR Y+ LY +E
Sbjct: 315 PSSITSAAFTLRTQYMKYLYPFE 337
>sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila melanogaster GN=osa PE=1
SV=1
Length = 2716
Score = 50.4 bits (119), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 55 PVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLL 114
P I + LDL+ LY+ RGG+ +V K W+++ + ++SA++ LRKHY L
Sbjct: 1025 PTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIG-ASSSAAYTLRKHYTKNL 1083
Query: 115 YHYEQVHF 122
+E HF
Sbjct: 1084 LTFE-CHF 1090
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 24 LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAE 83
L+ E ++ + + D + +F I G+ IP + + LDL+ L GGYE + +
Sbjct: 72 LNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYETICKD 131
Query: 84 KKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
++W V + P S +LR HY ++Y YE
Sbjct: 132 RRWARVAQRLNYPPGKNIGS-LLRSHYERIVYPYE 165
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 24 LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAE 83
L+ E ++ + + D + +F I G+ IP + + LDL+ L GGYE + +
Sbjct: 72 LNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYEAICKD 131
Query: 84 KKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
++W V + P S +LR HY ++Y YE
Sbjct: 132 RRWARVAQRLNYPPGKNIGS-LLRSHYERIVYPYE 165
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 24 LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAE 83
L+ E ++ + + D + +F I G+ IP + + LDL+ L GGYE + +
Sbjct: 72 LNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYEAICKD 131
Query: 84 KKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
++W V + P S +LR HY ++Y YE
Sbjct: 132 RRWARVAQRLNYPPGKNIGS-LLRSHYERIVYPYE 165
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 17 DKLYPAP----LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEAT 72
DKL+ P L+ E ++ + F D + +F + G IP + K LDL L
Sbjct: 57 DKLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVA 116
Query: 73 TRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHY 117
GG++ V E+KW ++ F+P S + R HY +LY Y
Sbjct: 117 EEGGFDVVCKERKWTKIATRMGFAPGKAVGSHI-RAHYERILYPY 160
>sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2
Length = 1503
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 17 DKLYPAP----LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEAT 72
D+L+ P L+ E ++ + F D + +F + G IP + K LDL+ L
Sbjct: 62 DRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCTLKIPHVERKILDLYQLNKLVA 121
Query: 73 TRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHY 117
GG++ V E++W ++ F+P S LR HY +LY Y
Sbjct: 122 DEGGFDLVCRERRWTKIAMTMGFAPGKAVGSH-LRAHYERILYPY 165
>sp|O02326|CFI1_CAEEL AT-rich interactive domain-containing protein cfi-1
OS=Caenorhabditis elegans GN=cfi-1 PE=1 SV=3
Length = 467
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 39 DTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPT 98
D L H I IP++ + LDL+ LY GG +++ +K WRE+ +
Sbjct: 190 DWLNFMHRIGKPVTRIPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSS 249
Query: 99 TTSASFVLRKHYLTLLYHYE 118
TSA+F LR Y LY YE
Sbjct: 250 ITSAAFTLRTQYQKYLYDYE 269
>sp|Q940Y3|ARID3_ARATH AT-rich interactive domain-containing protein 3 OS=Arabidopsis
thaliana GN=ARID3 PE=2 SV=1
Length = 786
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 39/88 (44%)
Query: 32 KDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGA 91
+D F L F F P G+ L+ L+ T GGY+KV K WR+VG
Sbjct: 495 EDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGE 554
Query: 92 VFKFSPTTTSASFVLRKHYLTLLYHYEQ 119
F+ T T+ S+ R Y L YE+
Sbjct: 555 SFRPPKTCTTVSWTFRGFYEKALLEYER 582
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 48.1 bits (113), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 24 LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAE 83
L+ E ++ + + D + +F I G+ IP + + LDL+ L GGYE + +
Sbjct: 72 LNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVMEEGGYEAICKD 131
Query: 84 KKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHYE 118
++W V + P + +LR HY ++Y YE
Sbjct: 132 RRWARVAQRLNY-PAGKNIGSLLRSHYERIIYPYE 165
>sp|A2BH40|ARI1A_MOUSE AT-rich interactive domain-containing protein 1A OS=Mus musculus
GN=Arid1a PE=1 SV=1
Length = 2283
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
+P +G K LDL+ LYV GG +V KKWRE+ T++SA+ L+K Y+
Sbjct: 1042 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVG-TSSSAASSLKKQYIQC 1100
Query: 114 LYHYE 118
LY +E
Sbjct: 1101 LYAFE 1105
>sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens
GN=ARID1A PE=1 SV=3
Length = 2285
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
+P +G K LDL+ LYV GG +V KKWRE+ T++SA+ L+K Y+
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVG-TSSSAASSLKKQYIQC 1099
Query: 114 LYHYE 118
LY +E
Sbjct: 1100 LYAFE 1104
>sp|C0SUW7|ARID6_ARATH AT-rich interactive domain-containing protein 6 OS=Arabidopsis
thaliana GN=ARID6 PE=2 SV=1
Length = 398
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 51 KFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHY 110
+F P G+ L++ L+ GGYE V K WR+VG F T T+ S+ R Y
Sbjct: 126 EFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVSYTFRNFY 185
Query: 111 LTLLYHYEQ 119
L YE+
Sbjct: 186 EKALLEYEK 194
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 17 DKLYPAP----LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEAT 72
DKL+ P L+ E ++ + F D + ++ + G+ IP + K LDL L
Sbjct: 79 DKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVERKILDLFQLNKLVA 138
Query: 73 TRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHY 117
GG+ V ++KW ++ F+P S + R HY +L Y
Sbjct: 139 EEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHI-RGHYERILNPY 182
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 17 DKLYPAP----LSSHEDVSKDPIVFWDTLRRFHFIMGTKFMIPVIGGKELDLHVLYVEAT 72
DKL+ P L+ E ++ + F D + ++ + G+ IP + K LDL L
Sbjct: 79 DKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVERKILDLFQLNKLVA 138
Query: 73 TRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTLLYHY 117
GG+ V ++KW ++ F+P S + R HY +L Y
Sbjct: 139 EEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHI-RGHYERILNPY 182
>sp|Q09441|YP83_CAEEL ARID domain-containing protein C08B11.3 OS=Caenorhabditis elegans
GN=C08B11.3 PE=4 SV=1
Length = 1244
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 37 FWDTLRRFH-FIMGTKFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKF 95
F+++LR F+ +P + G E++L+ LY GG++KV A KW ++ +F
Sbjct: 30 FYNSLRMFYKRRWNATLKLPHVQGVEVNLYRLYDTVMALGGWQKVAASDKWSDIAEMFGC 89
Query: 96 SPTTTSASFVLRKHYLTLLYHYEQV 120
++ Y+ L +EQV
Sbjct: 90 KDDILCGDHAIKIIYMRYLSKFEQV 114
>sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing protein 1B OS=Homo sapiens
GN=ARID1B PE=1 SV=2
Length = 2236
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
+P +G K LDL LYV GG +V KKWRE+ T++SA+ L+K Y+
Sbjct: 1077 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVG-TSSSAASSLKKQYIQY 1135
Query: 114 LYHYE 118
L+ +E
Sbjct: 1136 LFAFE 1140
>sp|Q03989|ARI5A_HUMAN AT-rich interactive domain-containing protein 5A OS=Homo sapiens
GN=ARID5A PE=1 SV=2
Length = 594
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
+P +G K+++L +Y G YE V + W+ V SP +TSA+ R+HY L
Sbjct: 79 VPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERL 138
Query: 114 LYHY 117
+ Y
Sbjct: 139 VLPY 142
>sp|Q6NQ79|ARID4_ARATH AT-rich interactive domain-containing protein 4 OS=Arabidopsis
thaliana GN=ARID4 PE=2 SV=1
Length = 747
Score = 38.9 bits (89), Expect = 0.029, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 49/125 (39%), Gaps = 26/125 (20%)
Query: 19 LYPAPLSSHEDVSKDPIV------FWDTLRRFHFIMGTKFMIP----------VIGGKEL 62
L P PL H D + I F + +F I G ++P V+ K L
Sbjct: 549 LNPLPLKKH-DCGRAHIQVCSEEEFLRDVMQFLLIRGHTRLVPPGGLAEFPDAVLNSKRL 607
Query: 63 DLHVLYVEATTRGGYEKVVAEKKWREVGAVFK------FSPTTTSASFVLRKHYLTLLYH 116
DL LY E +RGG+ V W+ G VF + T L++HY T L
Sbjct: 608 DLFNLYREVVSRGGFH-VGNGINWK--GQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLE 664
Query: 117 YEQVH 121
YE H
Sbjct: 665 YEYAH 669
>sp|Q3SWY1|ARI5A_BOVIN AT-rich interactive domain-containing protein 5A OS=Bos taurus
GN=ARID5A PE=2 SV=1
Length = 592
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
+P +G K+++L +Y G YE V + W+ V SP +TSA+ R+HY L
Sbjct: 76 VPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERL 135
Query: 114 LYHY 117
+ Y
Sbjct: 136 VLPY 139
>sp|Q3U108|ARI5A_MOUSE AT-rich interactive domain-containing protein 5A OS=Mus musculus
GN=Arid5a PE=1 SV=1
Length = 590
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 54 IPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHYLTL 113
+P +G K+++L +Y G YE V + W+ V SP +TSA+ R+HY L
Sbjct: 74 VPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERL 133
Query: 114 LYHY 117
+ Y
Sbjct: 134 VLPY 137
>sp|Q0WNR6|ARID5_ARATH AT-rich interactive domain-containing protein 5 OS=Arabidopsis
thaliana GN=ARID5 PE=2 SV=1
Length = 434
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 51 KFMIPVIGGKELDLHVLYVEATTRGGYEKVVAEKKWREVGAVFKFSPTTTSASFVLRKHY 110
+F P G+ L+ L+ GGY+ V K WR+VG F T T+ S+ R Y
Sbjct: 162 EFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSKLWRQVGESFHPPKTCTTVSWTFRIFY 221
Query: 111 LTLLYHYE----QVHFFKMQGPPCVPSGKFE 137
L YE Q + G +PS E
Sbjct: 222 EKALLEYEKHLRQNGELNLPGSASLPSSGIE 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.143 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,011,260
Number of Sequences: 539616
Number of extensions: 3269659
Number of successful extensions: 7976
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7903
Number of HSP's gapped (non-prelim): 67
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 59 (27.3 bits)