Query 027317
Match_columns 225
No_of_seqs 226 out of 1084
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 13:16:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 2.5E-67 8.7E-72 444.3 21.3 225 1-225 1-225 (319)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.2E-63 4.2E-68 421.3 21.3 220 1-225 4-239 (312)
3 1gp6_A Leucoanthocyanidin diox 100.0 6.3E-62 2.1E-66 417.2 22.2 222 3-225 46-279 (356)
4 1odm_A Isopenicillin N synthas 100.0 1E-59 3.6E-64 400.1 19.3 214 2-225 7-261 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 3.1E-59 1.1E-63 393.9 17.8 208 2-225 3-234 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 8.7E-57 3E-61 373.7 19.1 204 3-225 3-222 (280)
7 3itq_A Prolyl 4-hydroxylase, a 86.2 1.7 5.8E-05 33.8 6.3 54 157-217 113-179 (216)
8 2jig_A Prolyl-4 hydroxylase; h 83.1 2.3 7.9E-05 32.9 5.8 55 157-217 100-184 (224)
9 3dkq_A PKHD-type hydroxylase S 80.6 5.5 0.00019 31.5 7.2 59 156-220 100-174 (243)
10 2dbn_A Hypothetical protein YB 69.2 2.3 7.8E-05 36.8 2.3 54 2-59 99-152 (461)
11 3o2g_A Gamma-butyrobetaine dio 65.6 3.7 0.00013 34.8 2.9 52 3-59 122-173 (388)
12 1otj_A Alpha-ketoglutarate-dep 61.6 8.5 0.00029 30.7 4.2 48 4-57 18-65 (283)
13 2opi_A L-fuculose-1-phosphate 60.3 5.9 0.0002 30.4 2.9 36 3-41 125-160 (212)
14 2da7_A Zinc finger homeobox pr 57.7 6.7 0.00023 24.7 2.3 41 108-148 14-54 (71)
15 1oih_A Putative alkylsulfatase 54.0 13 0.00045 29.9 4.2 49 4-58 28-77 (301)
16 1m5a_B Insulin B chain; alpha 53.9 16 0.00055 18.8 2.9 19 18-36 9-27 (30)
17 1e4c_P L-fuculose 1-phosphate 53.5 8 0.00027 29.7 2.7 36 3-41 122-157 (215)
18 3r1j_A Alpha-ketoglutarate-dep 51.3 17 0.00058 29.5 4.4 50 4-59 22-72 (301)
19 2fk5_A Fuculose-1-phosphate al 50.0 11 0.00037 28.7 2.9 50 3-55 117-175 (200)
20 1pvt_A Sugar-phosphate aldolas 49.4 12 0.00042 29.1 3.2 49 3-54 161-211 (238)
21 3pvj_A Alpha-ketoglutarate-dep 47.9 15 0.00051 29.3 3.6 48 4-57 16-63 (277)
22 2hbt_A EGL nine homolog 1; pro 47.1 29 0.001 27.2 5.1 36 20-56 15-50 (247)
23 2x4k_A 4-oxalocrotonate tautom 46.8 20 0.0007 20.8 3.3 23 120-142 18-40 (63)
24 2ww6_A Fibritin, T4 fibritin; 45.2 16 0.00056 18.1 2.1 13 195-207 12-24 (27)
25 2v9l_A Rhamnulose-1-phosphate 43.2 12 0.00043 29.8 2.4 36 3-41 179-214 (274)
26 2kvu_A MKL/myocardin-like prot 42.2 19 0.00066 22.8 2.6 49 1-52 11-59 (75)
27 1nx8_A CARC, carbapenem syntha 41.5 8.5 0.00029 30.5 1.1 34 21-57 29-62 (273)
28 3ocr_A Class II aldolase/adduc 41.0 16 0.00056 29.2 2.8 37 3-41 156-192 (273)
29 3abf_A 4-oxalocrotonate tautom 40.4 31 0.0011 20.2 3.4 23 120-142 16-38 (64)
30 2irp_A Putative aldolase class 40.3 15 0.00052 27.9 2.4 35 3-41 139-176 (208)
31 1otf_A 4-oxalocrotonate tautom 36.3 42 0.0014 19.4 3.5 23 120-142 15-37 (62)
32 2opa_A Probable tautomerase YW 35.9 44 0.0015 19.2 3.6 22 120-141 15-36 (61)
33 3m0z_A Putative aldolase; MCSG 33.9 1.1E+02 0.0036 24.0 6.1 41 14-55 169-210 (249)
34 3tht_A Alkylated DNA repair pr 32.9 48 0.0016 27.5 4.4 60 157-224 200-266 (345)
35 4f3y_A DHPR, dihydrodipicolina 31.7 35 0.0012 27.2 3.3 16 124-139 171-186 (272)
36 3ry0_A Putative tautomerase; o 31.2 57 0.002 19.2 3.6 24 119-142 14-37 (65)
37 3qy9_A DHPR, dihydrodipicolina 31.2 37 0.0013 26.6 3.3 40 18-57 88-127 (243)
38 2qt7_A Receptor-type tyrosine- 30.2 20 0.00068 23.7 1.3 34 125-160 19-52 (91)
39 3ijp_A DHPR, dihydrodipicolina 30.1 41 0.0014 27.2 3.4 17 124-140 186-202 (288)
40 3i3q_A Alpha-ketoglutarate-dep 29.9 62 0.0021 24.7 4.3 55 158-220 108-172 (211)
41 2rdq_A 1-deoxypentalenic acid 29.8 67 0.0023 25.2 4.7 35 22-57 22-56 (288)
42 3ghf_A Septum site-determining 29.5 73 0.0025 21.9 4.3 36 6-44 51-86 (120)
43 3m6y_A 4-hydroxy-2-oxoglutarat 28.8 1.2E+02 0.0041 24.0 5.6 41 14-55 192-233 (275)
44 2iuw_A Alkylated repair protei 28.1 98 0.0033 24.0 5.3 61 157-224 128-207 (238)
45 1gyx_A YDCE, B1461, hypothetic 27.7 64 0.0022 19.8 3.4 24 119-142 15-38 (76)
46 3m21_A Probable tautomerase HP 27.5 71 0.0024 18.9 3.6 24 119-142 17-40 (67)
47 1zav_A 50S ribosomal protein L 27.4 1.5E+02 0.0052 21.7 6.0 40 16-55 7-47 (180)
48 2opw_A Phyhd1 protein; double- 26.7 74 0.0025 25.0 4.5 37 22-59 6-42 (291)
49 2j01_J 50S ribosomal protein L 26.5 1.5E+02 0.0052 21.6 5.9 39 16-54 5-45 (173)
50 3mb2_A 4-oxalocrotonate tautom 25.9 77 0.0026 19.2 3.5 24 119-142 15-38 (72)
51 3m20_A 4-oxalocrotonate tautom 24.8 76 0.0026 18.5 3.2 23 120-142 14-36 (62)
52 1vm6_A DHPR, dihydrodipicolina 23.8 79 0.0027 24.6 3.9 44 6-55 57-101 (228)
53 3s57_A Alpha-ketoglutarate-dep 22.2 1.1E+02 0.0036 23.1 4.3 60 158-224 103-180 (204)
54 4hti_A Receptor-type tyrosine- 21.8 59 0.002 21.8 2.4 37 125-163 26-62 (99)
55 3m4r_A Uncharacterized protein 21.5 30 0.001 26.7 1.0 34 4-41 156-190 (222)
56 3jsy_A Acidic ribosomal protei 20.5 1.6E+02 0.0053 22.4 5.0 39 16-54 4-43 (213)
57 3ej9_A Alpha-subunit of trans- 20.4 1.1E+02 0.0039 18.7 3.6 24 119-142 15-38 (76)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.5e-67 Score=444.30 Aligned_cols=225 Identities=78% Similarity=1.345 Sum_probs=206.1
Q ss_pred CCCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHhHhhhcCCCccccccc
Q 027317 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE 80 (225)
Q Consensus 1 m~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~Gy~~~~~~ 80 (225)
|++||||||+.+.+.++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....+||.+++.+
T Consensus 1 m~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e 80 (319)
T 1w9y_A 1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAE 80 (319)
T ss_dssp -CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCccccc
Confidence 88999999999875668899999999999999999999999999999999999999999999999976556799888777
Q ss_pred ccCCCCccceeccccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCceeeeee
Q 027317 81 VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVS 160 (225)
Q Consensus 81 ~~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~ 160 (225)
.+..||+|.|+++..|...+|.||+.+++||+.+++|+++|.+++.+||++|+++||+++++|.+.+...+++.+.+|++
T Consensus 81 ~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~ 160 (319)
T 1w9y_A 81 VTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVS 160 (319)
T ss_dssp GGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEE
T ss_pred CCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEE
Confidence 77889999999876666667899999999999999999999999999999999999999999999887533356789999
Q ss_pred ecCCCCCCCCCCCccccccCCceeEEEeCCCCCceeEeeCCceEecCCCCCcEEEEhhhHhhhcC
Q 027317 161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVIN 225 (225)
Q Consensus 161 ~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~v~p~~g~~vVnvGD~l~~~T 225 (225)
|||||+.++...|+++|||+|+||||+||+.++||||+++|+|++|+|+||++||||||+||+||
T Consensus 161 ~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~S 225 (319)
T 1w9y_A 161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVIT 225 (319)
T ss_dssp ECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred ecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHh
Confidence 99999988778899999999999999996469999999999999999999999999999999998
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.2e-63 Score=421.26 Aligned_cols=220 Identities=21% Similarity=0.339 Sum_probs=194.2
Q ss_pred CCCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHhHhhh---cCCCcccc
Q 027317 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMV---ASKGLEAV 77 (225)
Q Consensus 1 m~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~---~~~Gy~~~ 77 (225)
|++||||||+.+.+ ++++++++|++||+++|||||+||||+.++++++++.+++||+||.|+|+++.. ..+||.+.
T Consensus 4 ~~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 4 TSAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp CCSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 67999999998753 678899999999999999999999999999999999999999999999998743 45899877
Q ss_pred cccc----cCCCCccceeccc-cCC-------CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 027317 78 QSEV----NDLDWESTFFLRH-LPV-------SNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKK 145 (225)
Q Consensus 78 ~~~~----~~~d~~e~~~~~~-~~~-------~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~ 145 (225)
+.+. ...||+|.|+++. .+. ..+|.||+.+++||+++++|+++|.+++.+||++|+++||+++++|.+
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 7553 3579999998753 221 236899998999999999999999999999999999999999999999
Q ss_pred HhcCCCCCceeeeeeecCCCCCCCCCCCccccccCCceeEEEeCCCCCceeEe-eCCceEecCCCCCcEEEEhhhHhhhc
Q 027317 146 VFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLL-KDDQWVDVPPMKHSIVINLGDQLEVI 224 (225)
Q Consensus 146 ~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~-~~g~W~~v~p~~g~~vVnvGD~l~~~ 224 (225)
.+.. +.+.+|++|||||+.++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|+||++||||||+||+|
T Consensus 163 ~~~~---~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 163 TVQD---GNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp HHTT---CCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred HhcC---CcceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 8864 3467999999999876555899999999999999998 69999997 68999999999999999999999999
Q ss_pred C
Q 027317 225 N 225 (225)
Q Consensus 225 T 225 (225)
|
T Consensus 239 T 239 (312)
T 3oox_A 239 T 239 (312)
T ss_dssp T
T ss_pred h
Confidence 8
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=6.3e-62 Score=417.16 Aligned_cols=222 Identities=31% Similarity=0.595 Sum_probs=194.9
Q ss_pred CCcEEeCCCCCCC---cHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHhHhhh-----cCCCc
Q 027317 3 NFPIIDLSKLNGD---ERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMV-----ASKGL 74 (225)
Q Consensus 3 ~iP~IDl~~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~-----~~~Gy 74 (225)
+||+|||+.+.+. +|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.. ..+||
T Consensus 46 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy 125 (356)
T 1gp6_A 46 QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 125 (356)
T ss_dssp CCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEE
T ss_pred CCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCcccc
Confidence 5999999998642 367799999999999999999999999999999999999999999999999743 24666
Q ss_pred ccccc--cccCCCCccceeccccCC--CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhcCC
Q 027317 75 EAVQS--EVNDLDWESTFFLRHLPV--SNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGS 150 (225)
Q Consensus 75 ~~~~~--~~~~~d~~e~~~~~~~~~--~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~ 150 (225)
..... ..+..||+|.|+++..|. ..+|.||+.+++||+.+++|+++|.+++.+||++|+++||+++++|.+.+...
T Consensus 126 ~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~ 205 (356)
T 1gp6_A 126 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGL 205 (356)
T ss_dssp ECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHH
T ss_pred CcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccc
Confidence 54432 234679999998865442 35688999999999999999999999999999999999999999999987521
Q ss_pred CCCceeeeeeecCCCCCCCCCCCccccccCCceeEEEeCCCCCceeEeeCCceEecCCCCCcEEEEhhhHhhhcC
Q 027317 151 KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVIN 225 (225)
Q Consensus 151 ~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~v~p~~g~~vVnvGD~l~~~T 225 (225)
..+.+.||++|||||+.++..+|+++|||+|+||||+|| .++||||+++|+|++|+|+||++||||||+||+||
T Consensus 206 ~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~T 279 (356)
T 1gp6_A 206 EELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILS 279 (356)
T ss_dssp HHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred CCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhc
Confidence 014577999999999988888999999999999999998 69999999999999999999999999999999998
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1e-59 Score=400.09 Aligned_cols=214 Identities=22% Similarity=0.322 Sum_probs=189.7
Q ss_pred CCCcEEeCCCCCC---CcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHH-hcCCHHHHhHhhhcCCCcccc
Q 027317 2 ENFPIIDLSKLNG---DERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEH-YGKCMDQRFKQMVASKGLEAV 77 (225)
Q Consensus 2 ~~iP~IDl~~l~~---~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~Gy~~~ 77 (225)
++||||||+.+.+ ++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||.+.
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~--~Gy~~~ 81 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI--RAYNKE 81 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC--TTTCTT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh--cCCCcC
Confidence 4699999999853 246779999999999999999999999 899999999999 9999999999755 899887
Q ss_pred cccc----------cCCCCccceeccccC------------CCCCCCCCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027317 78 QSEV----------NDLDWESTFFLRHLP------------VSNMAEIPDL--EDDYRKAMKEFAVELEKVAEQLLELLC 133 (225)
Q Consensus 78 ~~~~----------~~~d~~e~~~~~~~~------------~~~~~~wP~~--~~~f~~~~~~y~~~~~~l~~~ll~~l~ 133 (225)
+.+. +..||+|.|+++... ...+|.||+. +++||+.+++|+++|.+++.+|+++|+
T Consensus 82 ~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la 161 (331)
T 1odm_A 82 HQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYA 161 (331)
T ss_dssp CTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6542 467999999886321 2347899987 899999999999999999999999999
Q ss_pred HHcCCChhhHHHHhcCCCCCceeee--eeecC------C---CCCCCC-CCCccccccCCceeEEEeCCCCCceeEe-eC
Q 027317 134 ENLGLEEGYLKKVFYGSKGPTFGTK--VSNYP------P---CPKPDL-IKGLRAHTDAGGIILLFQDDEVSGLQLL-KD 200 (225)
Q Consensus 134 ~~Lgl~~~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~q~~~~~GLqV~-~~ 200 (225)
++||+++++|.+.+.. +.+.+| ++||| | |+.++. .+|+++|||+|+||||+|| .++||||+ ++
T Consensus 162 ~~Lgl~~~~f~~~~~~---~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~ 237 (331)
T 1odm_A 162 LALGKEENFFARHFKP---DDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAA 237 (331)
T ss_dssp HHTTSCTTTTGGGCCT---TTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETT
T ss_pred HHhCCCHHHHHHHhcC---cHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEcCC
Confidence 9999999999998764 457799 99999 7 776665 7899999999999999998 69999999 67
Q ss_pred CceEecCCCCCcEEEEhhhHhhhcC
Q 027317 201 DQWVDVPPMKHSIVINLGDQLEVIN 225 (225)
Q Consensus 201 g~W~~v~p~~g~~vVnvGD~l~~~T 225 (225)
| |++|+|+||++||||||+||+||
T Consensus 238 g-Wi~V~p~pgalvVNiGD~l~~~T 261 (331)
T 1odm_A 238 G-YQDIEADDTGYLINCGSYMAHLT 261 (331)
T ss_dssp E-EEECCCCTTSEEEEECHHHHHHT
T ss_pred C-eEECCCCCCeEEEEccHHHHHHh
Confidence 8 99999999999999999999998
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3.1e-59 Score=393.89 Aligned_cols=208 Identities=13% Similarity=0.220 Sum_probs=172.9
Q ss_pred CCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCC-HHHHhHhhh----cCCCccc
Q 027317 2 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC-MDQRFKQMV----ASKGLEA 76 (225)
Q Consensus 2 ~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~----~~~Gy~~ 76 (225)
.+||||||+.+.+.+.. ++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|+++.. ..+||.+
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 46999999987533322 389999999999999999999999999999999999999 999999753 3488987
Q ss_pred cccc--------ccCCCCccceeccccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----ChhhHH
Q 027317 77 VQSE--------VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGL----EEGYLK 144 (225)
Q Consensus 77 ~~~~--------~~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl----~~~~~~ 144 (225)
.+.+ .+..||+|.|+++.. +|.|| +++||+.+++|+++|.+++.+|+++|+++||+ ++++|.
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~----~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~ 153 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTA----DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFL 153 (311)
T ss_dssp C-----------------CEEEEECSS----SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHH
T ss_pred ccccccccccCCCCCCCcceeeeccCC----CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHh
Confidence 6644 246799999998743 57899 89999999999999999999999999999999 888887
Q ss_pred HHhcCCCCCceeeeeeecCCCCCCC--C--CCCccccccCCceeEEEeCCCCCc---eeEeeCCceEecCCCCCcEEEEh
Q 027317 145 KVFYGSKGPTFGTKVSNYPPCPKPD--L--IKGLRAHTDAGGIILLFQDDEVSG---LQLLKDDQWVDVPPMKHSIVINL 217 (225)
Q Consensus 145 ~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~q~~~~~G---LqV~~~g~W~~v~p~~g~~vVnv 217 (225)
+. .+.+|++|||||+.++ . .+|+++|||+|+||||+||+.++| |||+++|+|++|+|+||++||||
T Consensus 154 ~~-------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 154 DC-------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp SC-------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEE
T ss_pred hc-------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEH
Confidence 53 3569999999998763 2 578999999999999999735899 99999999999999999999999
Q ss_pred hhHhhhcC
Q 027317 218 GDQLEVIN 225 (225)
Q Consensus 218 GD~l~~~T 225 (225)
||+||+||
T Consensus 227 GD~l~~~T 234 (311)
T 1dcs_A 227 GAIATLVT 234 (311)
T ss_dssp CHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999998
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=8.7e-57 Score=373.70 Aligned_cols=204 Identities=23% Similarity=0.318 Sum_probs=172.9
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcCCHHHHhHhhh---cCCCccccc-
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMV---ASKGLEAVQ- 78 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~---~~~Gy~~~~- 78 (225)
+||||||+.. +++++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.. ..+||.+.+
T Consensus 3 ~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~ 74 (280)
T 3on7_A 3 KLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASI 74 (280)
T ss_dssp -CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC-
T ss_pred CCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcc
Confidence 5999999963 25789999999999999999999999999999999999998 67777532 358888765
Q ss_pred ccc----cCCCCccceeccccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hh---HHHHhcC
Q 027317 79 SEV----NDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAEQLLELLCENLGLEE--GY---LKKVFYG 149 (225)
Q Consensus 79 ~~~----~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~--~~---~~~~~~~ 149 (225)
.+. ...||+|.|.+. +||+.+++||+.+++|+++|.+++.+||++++++||++. ++ |.+.+.+
T Consensus 75 ~e~~~~~~~~D~kE~~~~~--------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~ 146 (280)
T 3on7_A 75 SETAKGHTVKDIKEYYHVY--------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIAN 146 (280)
T ss_dssp -------CCCCSCEEEEEC--------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTT
T ss_pred ccccCCCCcccHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcC
Confidence 332 357999999763 377778899999999999999999999999999999863 33 5555543
Q ss_pred CCCCceeeeeeecCCCCCCC--CCCCccccccCCceeEEEeCCCCCceeEe-eCCceEecCCCCCcEEEEhhhHhhhcC
Q 027317 150 SKGPTFGTKVSNYPPCPKPD--LIKGLRAHTDAGGIILLFQDDEVSGLQLL-KDDQWVDVPPMKHSIVINLGDQLEVIN 225 (225)
Q Consensus 150 ~~~~~~~lr~~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~q~~~~~GLqV~-~~g~W~~v~p~~g~~vVnvGD~l~~~T 225 (225)
. ..+.+|++|||||+.++ ..+|+++|||+|+||||+|| .++||||+ ++|+|++|+|+||++|||+||+||+||
T Consensus 147 ~--~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 222 (280)
T 3on7_A 147 S--HKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEAS 222 (280)
T ss_dssp C--SSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHT
T ss_pred C--ccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHh
Confidence 2 23679999999998754 46889999999999999998 69999999 589999999999999999999999998
No 7
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=86.25 E-value=1.7 Score=33.82 Aligned_cols=54 Identities=24% Similarity=0.149 Sum_probs=33.3
Q ss_pred eeeeecCCCCCCCCCCCccccccCC-----------ceeEEEe--CCCCCceeEeeCCceEecCCCCCcEEEEh
Q 027317 157 TKVSNYPPCPKPDLIKGLRAHTDAG-----------GIILLFQ--DDEVSGLQLLKDDQWVDVPPMKHSIVINL 217 (225)
Q Consensus 157 lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--~~~~~GLqV~~~g~W~~v~p~~g~~vVnv 217 (225)
+++++|.+-. ...+|.|+. .+|+++. |...||==+..+ .=+.|+|..|.+|+--
T Consensus 113 lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~-~~~~V~P~~G~al~f~ 179 (216)
T 3itq_A 113 LHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPK-LNLSVHPRKGMAVYFE 179 (216)
T ss_dssp CEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETT-TTEEECCCTTCEEEEE
T ss_pred eeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecC-CCCEEecCCCeEEEEe
Confidence 7889997632 246777764 3677774 323344333333 2378999999988754
No 8
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=83.12 E-value=2.3 Score=32.94 Aligned_cols=55 Identities=20% Similarity=0.245 Sum_probs=33.2
Q ss_pred eeeeecCCCCCCCCCCCccccccC--------------CceeEEEe--CCCCCc-eeEeeCC-------------ceEec
Q 027317 157 TKVSNYPPCPKPDLIKGLRAHTDA--------------GGIILLFQ--DDEVSG-LQLLKDD-------------QWVDV 206 (225)
Q Consensus 157 lr~~~Yp~~~~~~~~~g~~~HtD~--------------g~lTlL~q--~~~~~G-LqV~~~g-------------~W~~v 206 (225)
+++++|.+-. ...+|.|+ ..+|+|+. |...|| +.+...+ .-+.|
T Consensus 100 ~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V 173 (224)
T 2jig_A 100 LQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAV 173 (224)
T ss_dssp CEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEE
T ss_pred eEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEE
Confidence 7788887622 24567774 24777763 323344 3332211 24789
Q ss_pred CCCCCcEEEEh
Q 027317 207 PPMKHSIVINL 217 (225)
Q Consensus 207 ~p~~g~~vVnv 217 (225)
+|..|.+|+.-
T Consensus 174 ~P~~G~al~f~ 184 (224)
T 2jig_A 174 KPIKGDALMFY 184 (224)
T ss_dssp CCCTTCEEEEE
T ss_pred ecccCcEEEEE
Confidence 99999998863
No 9
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=80.56 E-value=5.5 Score=31.47 Aligned_cols=59 Identities=12% Similarity=0.046 Sum_probs=37.0
Q ss_pred eeeeeecCCCCCCCCCCCccccccCC-----------ceeEEEeCCC----C-CceeEeeCCceEecCCCCCcEEEEhhh
Q 027317 156 GTKVSNYPPCPKPDLIKGLRAHTDAG-----------GIILLFQDDE----V-SGLQLLKDDQWVDVPPMKHSIVINLGD 219 (225)
Q Consensus 156 ~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q~~~----~-~GLqV~~~g~W~~v~p~~g~~vVnvGD 219 (225)
.+++++|.+-. -..+|.|.. .+|+++.-+. . |.|.+.....=..|+|..|.+|+.-.+
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEETT
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECCC
Confidence 37899997632 246777753 4666664322 2 335555443346899999999987655
Q ss_pred H
Q 027317 220 Q 220 (225)
Q Consensus 220 ~ 220 (225)
+
T Consensus 174 ~ 174 (243)
T 3dkq_A 174 S 174 (243)
T ss_dssp S
T ss_pred C
Confidence 4
No 10
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=69.25 E-value=2.3 Score=36.84 Aligned_cols=54 Identities=7% Similarity=0.142 Sum_probs=39.2
Q ss_pred CCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcC
Q 027317 2 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGK 59 (225)
Q Consensus 2 ~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 59 (225)
+.||.||++++... .+.++..+.+++.|++.|.|. ||.+...+..+...+|.+.
T Consensus 99 ~~iP~i~f~di~~~---~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 99 AVWPVLSYADIKAG---HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp CSSCEEEHHHHHHT---CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCC---CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 35999999876421 123456778899999988776 8988888777777777543
No 11
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=65.63 E-value=3.7 Score=34.77 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=38.3
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcC
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGK 59 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 59 (225)
++|.||++.+..+ .+...++.+|+.++|++.+.|-.++.+. ..+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~--d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY--DEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC--HHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHHhcC--HHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 5788998776422 4567889999999999999998887543 44556666444
No 12
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=61.56 E-value=8.5 Score=30.69 Aligned_cols=48 Identities=15% Similarity=0.120 Sum_probs=33.3
Q ss_pred CcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHh
Q 027317 4 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHY 57 (225)
Q Consensus 4 iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 57 (225)
|+-||++...+ .+..++|.+++.++|++.+.+-.++.+. ..+.++.|=
T Consensus 18 i~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 18 ISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp EESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred EECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 55567766332 3457899999999999999988876543 334555553
No 13
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=60.27 E-value=5.9 Score=30.40 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=28.8
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCC
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGI 41 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (225)
.||++++.... ..++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 58999886542 2567888999998888899999995
No 14
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.66 E-value=6.7 Score=24.71 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhc
Q 027317 108 DDYRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFY 148 (225)
Q Consensus 108 ~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~ 148 (225)
.+.+..+++||..-.+-...-+..||..+||+.+.....|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 46689999999999888888899999999999987766664
No 15
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=53.96 E-value=13 Score=29.90 Aligned_cols=49 Identities=16% Similarity=0.067 Sum_probs=33.9
Q ss_pred CcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCC-CChHHHHHHHHHHHHHhc
Q 027317 4 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHG-ISHELLDTVQRLTKEHYG 58 (225)
Q Consensus 4 iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 58 (225)
|+-||++...+ .+..++|.+++.++|++.+.+-. ++. ++..+.++.|-.
T Consensus 28 i~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 28 IRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred EeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 44566665332 34578999999999999999887 774 444555666543
No 16
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=53.90 E-value=16 Score=18.80 Aligned_cols=19 Identities=32% Similarity=0.504 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhcceEEE
Q 027317 18 SATMEMINDACENWGFFEL 36 (225)
Q Consensus 18 ~~~~~~l~~A~~~~Gff~l 36 (225)
..+++.|.-.|.+-||||-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4678889999999999983
No 17
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=53.54 E-value=8 Score=29.70 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=28.2
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCC
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGI 41 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (225)
.||++++.... -.++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG---TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 57888876542 2467788999998888899999995
No 18
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=51.30 E-value=17 Score=29.50 Aligned_cols=50 Identities=12% Similarity=-0.007 Sum_probs=35.0
Q ss_pred CcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcC-CCChHHHHHHHHHHHHHhcC
Q 027317 4 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNH-GISHELLDTVQRLTKEHYGK 59 (225)
Q Consensus 4 iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 59 (225)
|+-|||+...+ .+..++|++|+.++|.+.+.|- .++.+ +..+.++.|=.+
T Consensus 22 i~gvdl~~~L~---d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 22 VDGVRLGGDLD---DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EESCCCSTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred EeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 55567773222 4567899999999999999998 77764 344566666443
No 19
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=50.04 E-value=11 Score=28.66 Aligned_cols=50 Identities=16% Similarity=0.122 Sum_probs=34.3
Q ss_pred CCcEE-eCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCC--h------HHHHHHHHHHHH
Q 027317 3 NFPII-DLSKLNGDERSATMEMINDACENWGFFELVNHGIS--H------ELLDTVQRLTKE 55 (225)
Q Consensus 3 ~iP~I-Dl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~------~~~~~~~~~~~~ 55 (225)
.||++ ++.... ..++++.+.+++.+.-.+.|.|||+= - +.+++++..+..
T Consensus 117 ~ip~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVSA---TEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCSS---SHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCC---cHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 57888 665432 25778889999988888999999951 2 445555554443
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=49.42 E-value=12 Score=29.11 Aligned_cols=49 Identities=8% Similarity=0.039 Sum_probs=33.3
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCC--hHHHHHHHHHHH
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGIS--HELLDTVQRLTK 54 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 54 (225)
.||++++.... ..++++++.+++++.-.+.+.|||+= -+.+++++..+.
T Consensus 161 ~v~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 211 (238)
T 1pvt_A 161 GISVVEFEKPG---SVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVE 211 (238)
T ss_dssp CCEEECCCSTT---CHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHH
T ss_pred CceEecCCCCC---cHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 58888876432 25678889999988888999999952 223444444443
No 21
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=47.94 E-value=15 Score=29.34 Aligned_cols=48 Identities=17% Similarity=0.148 Sum_probs=34.0
Q ss_pred CcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHh
Q 027317 4 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHY 57 (225)
Q Consensus 4 iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 57 (225)
|.=|||++..+ .+..++|.+|+.++|.+.+.|-.++.+ +..+.++.|=
T Consensus 16 i~gvdl~~~l~---~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 16 ISGVDISRDIS---AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp EESCCTTSCCC---HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred EeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 45567776322 456788999999999999999888754 3345566653
No 22
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=47.12 E-value=29 Score=27.19 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHH
Q 027317 20 TMEMINDACENWGFFELVNHGISHELLDTVQRLTKEH 56 (225)
Q Consensus 20 ~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 56 (225)
..+.+.+++.+.|++++.|- ++++.++.+.+.++..
T Consensus 15 ~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 15 ALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhh
Confidence 34678899999999876554 8999999999887763
No 23
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=46.82 E-value=20 Score=20.77 Aligned_cols=23 Identities=9% Similarity=0.237 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 027317 120 ELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 120 ~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
+-.+++..|.+++++.||.|+++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 45678899999999999999864
No 24
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=45.25 E-value=16 Score=18.09 Aligned_cols=13 Identities=23% Similarity=0.335 Sum_probs=10.3
Q ss_pred eeEeeCCceEecC
Q 027317 195 LQLLKDDQWVDVP 207 (225)
Q Consensus 195 LqV~~~g~W~~v~ 207 (225)
..|+++|.|+..+
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 5677899999764
No 25
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=43.21 E-value=12 Score=29.85 Aligned_cols=36 Identities=11% Similarity=0.079 Sum_probs=27.8
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCC
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGI 41 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (225)
.||++++... .-.+.++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP---GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS---SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC---CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 4778877543 22577888999999888899999995
No 26
>2kvu_A MKL/myocardin-like protein 1; SAP motif, DNA/RNA binding, structural genomics, northeast structural genomics consortium (NESG), PSI-2; NMR {Homo sapiens} PDB: 2kw9_A
Probab=42.23 E-value=19 Score=22.83 Aligned_cols=49 Identities=12% Similarity=0.107 Sum_probs=32.1
Q ss_pred CCCCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHH
Q 027317 1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRL 52 (225)
Q Consensus 1 m~~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~ 52 (225)
|+.+|.++-..+...-..-.+.+|.+-|+..| |.-.|--.++++++.+.
T Consensus 11 ~~~~~~~~~g~l~~~l~klkVaeLK~eLk~RG---L~~sG~KaeLIeRL~~~ 59 (75)
T 2kvu_A 11 MSTPLTGKPGALPANLDDMKVAELKQELKLRS---LPVSGTKTELIERLRAY 59 (75)
T ss_dssp CCSCSCSSCSSCCTTTTTSCHHHHHHHHHHTT---CCCCSCHHHHHHHHHHH
T ss_pred cccCCCCCCccchHHHHHCcHHHHHHHHHHcC---CCCCCCHHHHHHHHHHH
Confidence 66677766654321111234577999999999 55667778888887764
No 27
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=41.51 E-value=8.5 Score=30.47 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=25.6
Q ss_pred HHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHh
Q 027317 21 MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHY 57 (225)
Q Consensus 21 ~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 57 (225)
.++|.+++.++|++.+.+-.++.+ ...+.++.|=
T Consensus 29 ~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G 62 (273)
T 1nx8_A 29 TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYG 62 (273)
T ss_dssp HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTS
T ss_pred HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 678999999999999998887653 3445555553
No 28
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=41.00 E-value=16 Score=29.19 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=28.5
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCC
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGI 41 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 41 (225)
.||++++..+.. ..++++.+.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~--~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIAL--DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSC--CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCC--CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 478888765421 2567788999999999999999995
No 29
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=40.39 E-value=31 Score=20.16 Aligned_cols=23 Identities=17% Similarity=0.161 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 027317 120 ELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 120 ~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
+-.+++..|.+++++.||.|+++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 34678889999999999999764
No 30
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=40.29 E-value=15 Score=27.85 Aligned_cols=35 Identities=14% Similarity=0.222 Sum_probs=25.9
Q ss_pred CCcEEeCCCCCCCcHHHHHHHHHHHHHhcc---eEEEEcCCC
Q 027317 3 NFPIIDLSKLNGDERSATMEMINDACENWG---FFELVNHGI 41 (225)
Q Consensus 3 ~iP~IDl~~l~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi 41 (225)
.||+++.. .+.+++++.+.+++.+.+ .+.|.|||+
T Consensus 139 ~vp~~~~~----~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE----QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC----SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC----CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 46776653 234678888999998865 788999995
No 31
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=36.35 E-value=42 Score=19.37 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 027317 120 ELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 120 ~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
+-.+++..|.+++.+.||+|++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 44678899999999999999753
No 32
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=35.94 E-value=44 Score=19.24 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHcCCChh
Q 027317 120 ELEKVAEQLLELLCENLGLEEG 141 (225)
Q Consensus 120 ~~~~l~~~ll~~l~~~Lgl~~~ 141 (225)
+-.+++..|.+++++.||++++
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~ 36 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEE 36 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcC
Confidence 4467889999999999999975
No 33
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=33.90 E-value=1.1e+02 Score=23.98 Aligned_cols=41 Identities=24% Similarity=0.401 Sum_probs=30.9
Q ss_pred CCcHHHHHHHHHHHHHhcceEEEEcC-CCChHHHHHHHHHHHH
Q 027317 14 GDERSATMEMINDACENWGFFELVNH-GISHELLDTVQRLTKE 55 (225)
Q Consensus 14 ~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 55 (225)
+..+.++...+.+||.+.|| ++--. ||+.+-+..+.+.+.+
T Consensus 169 Gl~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 169 GLKHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTTTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 44567788999999999999 66655 6987777777766543
No 34
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=32.87 E-value=48 Score=27.46 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=40.2
Q ss_pred eeeeecCCCCCCCCCCCccccccCC------ceeEEEeCCCCCceeEee-CCceEecCCCCCcEEEEhhhHhhhc
Q 027317 157 TKVSNYPPCPKPDLIKGLRAHTDAG------GIILLFQDDEVSGLQLLK-DDQWVDVPPMKHSIVINLGDQLEVI 224 (225)
Q Consensus 157 lr~~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~q~~~~~GLqV~~-~g~W~~v~p~~g~~vVnvGD~l~~~ 224 (225)
.-+|+|.+- .++++|.|-. +.|+=+. ...=+.+.. +|.++.+.-.+|+++|.-|++=..|
T Consensus 200 ~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w 266 (345)
T 3tht_A 200 MTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLW 266 (345)
T ss_dssp EEEEEECTT------CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTS
T ss_pred EEEEEecCC------CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhce
Confidence 448899762 2688999874 2233222 123344443 4779999999999999999876655
No 35
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=31.70 E-value=35 Score=27.20 Aligned_cols=16 Identities=19% Similarity=0.119 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHcCCC
Q 027317 124 VAEQLLELLCENLGLE 139 (225)
Q Consensus 124 l~~~ll~~l~~~Lgl~ 139 (225)
.|..+.+.++++++.+
T Consensus 171 TA~~la~~i~~~~~~~ 186 (272)
T 4f3y_A 171 TALMMGETIAAATGRS 186 (272)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhCcc
Confidence 4666777788877665
No 36
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=31.18 E-value=57 Score=19.24 Aligned_cols=24 Identities=25% Similarity=0.227 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 027317 119 VELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 119 ~~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
++-.+|+..|.+++.+.||+|++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345788999999999999999753
No 37
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=31.16 E-value=37 Score=26.58 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHh
Q 027317 18 SATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHY 57 (225)
Q Consensus 18 ~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 57 (225)
.+..++|.++|++.+.++--|-.+.-.++.++.+.+.++|
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhc
Confidence 3456788888888888888888877777777777666655
No 38
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=30.16 E-value=20 Score=23.69 Aligned_cols=34 Identities=24% Similarity=0.469 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCChhhHHHHhcCCCCCceeeeee
Q 027317 125 AEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVS 160 (225)
Q Consensus 125 ~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~ 160 (225)
+.+||+.+|+.|++|..+|.+.--. ++.-..|+.
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~--g~aVTFrV~ 52 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVV--GPALTFRIR 52 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEE--TTEEEEEEC
T ss_pred HHHHHHHHHHHhcCCccceeeeEee--cceEEEEec
Confidence 6789999999999999988874322 244445653
No 39
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=30.09 E-value=41 Score=27.15 Aligned_cols=17 Identities=18% Similarity=-0.044 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHcCCCh
Q 027317 124 VAEQLLELLCENLGLEE 140 (225)
Q Consensus 124 l~~~ll~~l~~~Lgl~~ 140 (225)
.|..+.+.++++++.+.
T Consensus 186 TA~~la~~i~~~~~~~~ 202 (288)
T 3ijp_A 186 TALLLGQAAAEGRNIML 202 (288)
T ss_dssp HHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 46667778888887653
No 40
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=29.95 E-value=62 Score=24.72 Aligned_cols=55 Identities=16% Similarity=0.163 Sum_probs=36.1
Q ss_pred eeeecCCCCCCCCCCCccccccC-----C--ceeEEEeCCCCCceeEee---CCceEecCCCCCcEEEEhhhH
Q 027317 158 KVSNYPPCPKPDLIKGLRAHTDA-----G--GIILLFQDDEVSGLQLLK---DDQWVDVPPMKHSIVINLGDQ 220 (225)
Q Consensus 158 r~~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~q~~~~~GLqV~~---~g~W~~v~p~~g~~vVnvGD~ 220 (225)
-+|+|.+- . +++.|.|- + ++++-+. ...=+.+.. .+..+.+.-.+|+++|.-|++
T Consensus 108 LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~ 172 (211)
T 3i3q_A 108 LINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES 172 (211)
T ss_dssp EEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG
T ss_pred EEEEEcCC-----C-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchH
Confidence 38899762 2 68899992 2 2233332 123344442 267889999999999999886
No 41
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=29.82 E-value=67 Score=25.17 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=28.9
Q ss_pred HHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHh
Q 027317 22 EMINDACENWGFFELVNHGISHELLDTVQRLTKEHY 57 (225)
Q Consensus 22 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 57 (225)
+++.+.+++.||+.|.|- ++.+.++++.+...+++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~ 56 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGL 56 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 457889999999998764 78999999888877764
No 42
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=29.54 E-value=73 Score=21.91 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=25.3
Q ss_pred EEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcCCCChH
Q 027317 6 IIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHE 44 (225)
Q Consensus 6 ~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~ 44 (225)
|||++.+... .-..+|.+.|+++|+..+--.|-+.+
T Consensus 51 VlDl~~l~~~---~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESP---VNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSS---CCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCCh---HHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 5688877521 12467889999999998766665544
No 43
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=28.82 E-value=1.2e+02 Score=24.01 Aligned_cols=41 Identities=29% Similarity=0.503 Sum_probs=30.9
Q ss_pred CCcHHHHHHHHHHHHHhcceEEEEcC-CCChHHHHHHHHHHHH
Q 027317 14 GDERSATMEMINDACENWGFFELVNH-GISHELLDTVQRLTKE 55 (225)
Q Consensus 14 ~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 55 (225)
+..+.++...+.+||.+.|| ++--. ||+.+-++.+.+.+.+
T Consensus 192 Gl~~leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l~ 233 (275)
T 3m6y_A 192 GLAHEEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIALE 233 (275)
T ss_dssp TTTTHHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHHH
Confidence 34567788999999999999 66555 6988777777766543
No 44
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=28.11 E-value=98 Score=23.95 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=38.1
Q ss_pred eeeeecCCCCCCCCCCCccccccCC--------ceeEEEeCCCCCceeEee-C----------CceEecCCCCCcEEEEh
Q 027317 157 TKVSNYPPCPKPDLIKGLRAHTDAG--------GIILLFQDDEVSGLQLLK-D----------DQWVDVPPMKHSIVINL 217 (225)
Q Consensus 157 lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~q~~~~~GLqV~~-~----------g~W~~v~p~~g~~vVnv 217 (225)
.-+|+|++-. -+++.|.|-. +.|+-+.. ..=+.+.. . +..+.+.-.+|+++|.-
T Consensus 128 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~--~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 128 LLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA--TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES--CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC--CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 3489997632 2578888842 23333321 22344432 1 36889999999999999
Q ss_pred hhHhhhc
Q 027317 218 GDQLEVI 224 (225)
Q Consensus 218 GD~l~~~ 224 (225)
|++=..|
T Consensus 201 G~~r~~w 207 (238)
T 2iuw_A 201 GATQADW 207 (238)
T ss_dssp ETHHHHE
T ss_pred hhhhCcc
Confidence 9875444
No 45
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=27.68 E-value=64 Score=19.83 Aligned_cols=24 Identities=8% Similarity=0.235 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 027317 119 VELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 119 ~~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
++-.+++..|.+++.+.||++++.
T Consensus 15 eqk~~L~~~l~~~l~~~lgip~~~ 38 (76)
T 1gyx_A 15 QQKAALAADITDVIIRHLNSKDSS 38 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCCce
Confidence 345788999999999999999764
No 46
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=27.53 E-value=71 Score=18.95 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 027317 119 VELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 119 ~~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
++-.+++..|.+++++.||++++.
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCcCccc
Confidence 345678889999999999999753
No 47
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=27.43 E-value=1.5e+02 Score=21.73 Aligned_cols=40 Identities=8% Similarity=0.204 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHHHHhcceEEEEcC-CCChHHHHHHHHHHHH
Q 027317 16 ERSATMEMINDACENWGFFELVNH-GISHELLDTVQRLTKE 55 (225)
Q Consensus 16 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 55 (225)
.+.+..++|.+.+++...++++++ |++...+.++....+.
T Consensus 7 ~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 7 QKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 356788899999999999988876 8988777777666554
No 48
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=26.68 E-value=74 Score=24.99 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=30.2
Q ss_pred HHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHHhcC
Q 027317 22 EMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGK 59 (225)
Q Consensus 22 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 59 (225)
++..+.+++.||+.|.|- ++.+.++++.+...+.++.
T Consensus 6 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~~ 42 (291)
T 2opw_A 6 PSQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVAE 42 (291)
T ss_dssp HHHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHhh
Confidence 456778999999988764 7999999999988887654
No 49
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=26.54 E-value=1.5e+02 Score=21.56 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHHHHhcc-eEEEEcC-CCChHHHHHHHHHHH
Q 027317 16 ERSATMEMINDACENWG-FFELVNH-GISHELLDTVQRLTK 54 (225)
Q Consensus 16 ~~~~~~~~l~~A~~~~G-ff~l~nh-gi~~~~~~~~~~~~~ 54 (225)
.+.+..++|.+.++++. .++++++ |++...+.++....+
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 35677888999999988 7776654 888777666665554
No 50
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=25.90 E-value=77 Score=19.15 Aligned_cols=24 Identities=8% Similarity=0.022 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 027317 119 VELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 119 ~~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
+.-.+|+..|.+++++.||.|++.
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc
Confidence 345678889999999999999754
No 51
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=24.77 E-value=76 Score=18.54 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 027317 120 ELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 120 ~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
+-.+|+..|.+++++.||.+++.
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHhCcCcce
Confidence 44678889999999999998753
No 52
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=23.83 E-value=79 Score=24.57 Aligned_cols=44 Identities=23% Similarity=0.414 Sum_probs=0.0
Q ss_pred EEeCCCCCCCcHHHHHHHHHHHHHhcceEEEEcC-CCChHHHHHHHHHHHH
Q 027317 6 IIDLSKLNGDERSATMEMINDACENWGFFELVNH-GISHELLDTVQRLTKE 55 (225)
Q Consensus 6 ~IDl~~l~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 55 (225)
+|||+. ++.+....+.|.+.|.=.|++. |.+++..+.+.++++.
T Consensus 57 vIDFT~------P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 101 (228)
T 1vm6_A 57 VIDFSS------PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKE 101 (228)
T ss_dssp EEECSC------GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTT
T ss_pred EEECCC------HHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHhh
No 53
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=22.21 E-value=1.1e+02 Score=23.14 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=37.3
Q ss_pred eeeecCCCCCCCCCCCccccccCC--------ceeEEEeCCCCCceeEeeC----------CceEecCCCCCcEEEEhhh
Q 027317 158 KVSNYPPCPKPDLIKGLRAHTDAG--------GIILLFQDDEVSGLQLLKD----------DQWVDVPPMKHSIVINLGD 219 (225)
Q Consensus 158 r~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~q~~~~~GLqV~~~----------g~W~~v~p~~g~~vVnvGD 219 (225)
-+|+|.+-. -+++.|.|-. +.++-+. ...=+.+... +..+.+.-.+|+++|.-|+
T Consensus 103 LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 103 LINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred EEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 389997632 2578888862 1233232 1233444421 2578899999999999998
Q ss_pred Hhhhc
Q 027317 220 QLEVI 224 (225)
Q Consensus 220 ~l~~~ 224 (225)
+=..|
T Consensus 176 ~q~~w 180 (204)
T 3s57_A 176 TNTHW 180 (204)
T ss_dssp HHHHE
T ss_pred hhhee
Confidence 75544
No 54
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=21.85 E-value=59 Score=21.76 Aligned_cols=37 Identities=24% Similarity=0.211 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHcCCChhhHHHHhcCCCCCceeeeeeecC
Q 027317 125 AEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYP 163 (225)
Q Consensus 125 ~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~~Yp 163 (225)
+.+|++.+|+.|+++..+|.+.--. ++.-..|+..-+
T Consensus 26 G~~l~~~la~~l~l~~~~F~~isV~--g~aVTFrV~~N~ 62 (99)
T 4hti_A 26 GRRLVEDVARLLQVPSSAFADVEVL--GPAVTFKVSANV 62 (99)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEE--TTEEEEEECCCT
T ss_pred HHHHHHHHHHHhCCchhheeeeeec--CceEEEEeccCC
Confidence 6789999999999999888764322 234445554433
No 55
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=21.46 E-value=30 Score=26.67 Aligned_cols=34 Identities=9% Similarity=0.069 Sum_probs=25.5
Q ss_pred CcEEeCCCCCCCcHHHHHHHHHHHHHhc-ceEEEEcCCC
Q 027317 4 FPIIDLSKLNGDERSATMEMINDACENW-GFFELVNHGI 41 (225)
Q Consensus 4 iP~IDl~~l~~~~~~~~~~~l~~A~~~~-Gff~l~nhgi 41 (225)
||++++.... - +.++++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g---~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPG---F-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSS---H-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCc---H-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 6788876532 2 6788999999864 6777999995
No 56
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=20.53 E-value=1.6e+02 Score=22.44 Aligned_cols=39 Identities=5% Similarity=0.124 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHHHHhcceEEEEcC-CCChHHHHHHHHHHH
Q 027317 16 ERSATMEMINDACENWGFFELVNH-GISHELLDTVQRLTK 54 (225)
Q Consensus 16 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~ 54 (225)
.+.+..++|.+.+.++..++|++. |++...++++....|
T Consensus 4 ~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 4 WKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 356778889999998888877764 788777777666555
No 57
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=20.42 E-value=1.1e+02 Score=18.70 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 027317 119 VELEKVAEQLLELLCENLGLEEGY 142 (225)
Q Consensus 119 ~~~~~l~~~ll~~l~~~Lgl~~~~ 142 (225)
+.-.+++..|.+++++.+|+|++.
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~ 38 (76)
T 3ej9_A 15 EQKRALSAGLLRVISEATGEPREN 38 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCcCccc
Confidence 345678899999999999999763
Done!