BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027320
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/225 (89%), Positives = 214/225 (95%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
+ +EYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD TSV+HLFPITKYLGLLAT
Sbjct: 22 LFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLAT 81
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GMTADARTLVQQAR EAAEFRFKYGYEMPVDVL+KWIADKSQVYTQHAYMRPLGVVAM+L
Sbjct: 82 GMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMIL 141
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
IDEE GP+LFKCDPAGHFFGHKATSAG KEQEAINFLEKKMKNDPAF+++ETVQTAIS
Sbjct: 142 GIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISA 201
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
LQSVLQEDFKASEIEVGVV KE+P FRVL+ EEIDEHLTAISERD
Sbjct: 202 LQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLTAISERD 246
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/225 (88%), Positives = 215/225 (95%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
+ +EYAFKAVKAAG+TSIGVRGKDS+CVVT KKVPDKLLD+TSVTHLFPITKYLGLLAT
Sbjct: 22 LFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLAT 81
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GMTADARTLVQQAR EAAEFRF YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL
Sbjct: 82 GMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 141
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
ID+E GP+L+KCDPAGH+FGHKATSAGLK+QEAINFLEKKMKNDP+FT++ETVQTAIS
Sbjct: 142 GIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISA 201
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
LQSVLQEDFKA+EIEVGVV K+NPEFRVL+ +EIDEHLTAISERD
Sbjct: 202 LQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLTAISERD 246
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/225 (83%), Positives = 209/225 (92%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
+ +EYAFKAVK AG+TSIGVRGKDSVCVVTQKKVPDKLLD +SVTHLFPITKY+GL+AT
Sbjct: 22 LFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVAT 81
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
G+TADAR+LVQQAR +AAEFRF YGYEMPVD+LAKWIADKSQVYTQHAYMRPLGVVAMV+
Sbjct: 82 GITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVM 141
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
+DEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +P+FTF ETVQTAIS
Sbjct: 142 GVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISA 201
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
LQSVLQEDFKA+EIEVGVV ENPEFR L+ EEI+EHLTAISERD
Sbjct: 202 LQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLTAISERD 246
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/225 (84%), Positives = 208/225 (92%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
+ +EYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD +SV+HLFP+TKYLGLLAT
Sbjct: 22 LFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLAT 81
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GMTAD+R+LVQQAR EAAEFRF+YGYEMP D+LAKWIADKSQVYTQHAYMRPLGVVAMVL
Sbjct: 82 GMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVL 141
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
IDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +PAFT+ ETVQTAIS
Sbjct: 142 GIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISA 201
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
LQSVLQEDFKA+EIEVGVV ++P FR L EEIDEHLTAISERD
Sbjct: 202 LQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLTAISERD 246
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/222 (85%), Positives = 207/222 (93%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKAVK+AGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKY+GLLATG+T
Sbjct: 25 VEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLT 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR+LV QAR EAAEFRFK+GYEMPVDVLAKWIADK+QVYTQHAYMRPLGVVAMVL D
Sbjct: 85 ADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYD 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
EE +LFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK+DP F+++ETVQ AIS LQS
Sbjct: 145 EEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQS 204
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
VLQEDFKA+EIEVGVV K++ FR L+ EEID+HLTAISERD
Sbjct: 205 VLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLTAISERD 246
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 181/222 (81%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMT
Sbjct: 25 VEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMT 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
AD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++ ID
Sbjct: 85 ADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
EE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +
Sbjct: 145 EEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLST 204
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 205 VLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 181/222 (81%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMT
Sbjct: 25 VEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMT 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
AD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++ ID
Sbjct: 85 ADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
EE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +
Sbjct: 145 EEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLST 204
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 205 VLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 181/222 (81%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMT
Sbjct: 25 VEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMT 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
AD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++ ID
Sbjct: 85 ADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
EE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +
Sbjct: 145 EEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLST 204
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 205 VLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 181/222 (81%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMT
Sbjct: 25 VEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMT 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
AD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++ ID
Sbjct: 85 ADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
EE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +
Sbjct: 145 EEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLST 204
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 205 VLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 256 bits (655), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 166/224 (74%), Gaps = 4/224 (1%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA AG+TS+GV GK+ CV++QKKVPDKL+D ++V H+FPITK +G + TG
Sbjct: 23 VEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSI 82
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ A MRPLGV ++++D
Sbjct: 83 ADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVD 142
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND--PAFTFQETVQTAISTL 181
+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D P+ +TV+T I L
Sbjct: 143 DEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPS-NLTDTVETGIQAL 201
Query: 182 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
S L DFK++E+++GVV + P FRVLS+EEI+ HL +I+E+D
Sbjct: 202 MSSLSTDFKSTELQIGVVEDDKP-FRVLSVEEIEAHLQSIAEKD 244
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 167/227 (73%), Gaps = 5/227 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
IEYAFKA+K G+TS+G+RGKD V V TQKK+PDKL+D SVT L+ +T Y+G + TG+
Sbjct: 24 IEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSVTSLYKLTDYIGCVQTGIV 83
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
D+++ +A E A F K+GY++P +VLAK +AD +Q+ TQHA RPLGV +++ ID
Sbjct: 84 PDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIGID 143
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQT-----AI 178
+E GP+LFK DPAG F G+KAT+AG KEQE+ NFLEKK K++P + ET+Q AI
Sbjct: 144 DELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVMAI 203
Query: 179 STLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
STLQSVL D K+S++E+G+ + +N +F +++ E+ID LT ++ERD
Sbjct: 204 STLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDIDSQLTKLAERD 250
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 238 bits (607), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 157/222 (70%), Gaps = 2/222 (0%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA+ +T++ ++ D V TQKKV +K + +VTHLF ITK +G TG
Sbjct: 25 VEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRI 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD +QVYTQ+A MRPLG ++++ D
Sbjct: 85 ADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYD 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
E GP ++K DPAG+F G KA S G K EA ++LEKK K P + ++ +Q AIS L S
Sbjct: 145 NEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK--PNLSEEKAIQLAISCLSS 202
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
VL DFK + IE+GVVSK +P FR+L EI+EHLT I+E+D
Sbjct: 203 VLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 158/227 (69%), Gaps = 7/227 (3%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA + S+ VRGKD V++QKKVPDKLLD T+V+++F I++ +G++ G
Sbjct: 28 VEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPI 87
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+ +S+D
Sbjct: 88 PDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVD 147
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKNDPAF--TFQETVQTAI 178
EE GP ++K DPAG++ G+KAT+ G K+QE LE KK K D ++++ V+ AI
Sbjct: 148 EELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAI 207
Query: 179 STLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
+ + L +F +++EVGV +K+ +F LS E I+E L AI+E+D
Sbjct: 208 THMIDALGTEFSKNDLEVGVATKD--KFFTLSAENIEERLVAIAEQD 252
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 194 bits (494), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 149/222 (67%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKA+ + +T++ V+G D+ + QK+VPD L+ +VT ++ I++ +G A GM
Sbjct: 25 VEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMI 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
DA+ +++A+ EAA +++K GY+MP ++LAK +AD +Q YTQ+A MR LG + +S D
Sbjct: 85 PDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYD 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+E GP +++ DPAG++ G K S G+K+ A +FLEKK+K T E ++ AI LQ+
Sbjct: 145 DEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQT 204
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 225
L D ++ ++EV VV+K+N +F L+ ++++ HL I+ RD
Sbjct: 205 SLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLNQIANRD 246
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 156 bits (395), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 136/227 (59%), Gaps = 8/227 (3%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYAFKAV AG+ ++ +R KD+V V TQ VPDKL+ ++T L+ + G+ TG
Sbjct: 22 VEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRA 81
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSI- 122
D + LVQ+AR EA+E++++YG M V VLAK D +QV TQ A MR +G + + +
Sbjct: 82 PDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGME 141
Query: 123 -DEECG---PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTF--QETVQT 176
++E G P+++ DPAG H A + G K+ EA FLEKK KN P T +E
Sbjct: 142 QNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMI 200
Query: 177 AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 223
A++ LQS L E +AS +EVG + ++ F +S E+ + LT +++
Sbjct: 201 ALAALQSALGESLRASGVEVGRCTADDHHFLRVSDREVKKWLTPLAK 247
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 132/224 (58%), Gaps = 8/224 (3%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ ++ V + K+V KL++ S+ ++ I ++G G+
Sbjct: 26 VEYAREAVKR-GTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLV 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV++AR EA +R+ YG + VDVL K I D QVYTQH +RP G ++ +D
Sbjct: 85 ADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVD 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ G RLF+ DP+G HKAT+ G QEA++ E++ + D T QE ++ A+ L
Sbjct: 145 TK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED--MTLQEAIELAVRALYE 201
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI--SERD 225
+E+ A +E+ VV K+ FR L ++I+E + SE D
Sbjct: 202 ASREETTADNLEIAVVDKQG--FRKLERKKIEEMFERVVGSEED 243
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 122/221 (55%), Gaps = 4/221 (1%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I +++G +G+
Sbjct: 23 VEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLV 81
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D
Sbjct: 82 ADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD 141
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ PRLF+ DP+G +KAT+ G + E + D + + L
Sbjct: 142 DNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNMDAAILLGMDALYK 198
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 224
+ F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 199 AAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 123/221 (55%), Gaps = 4/221 (1%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+
Sbjct: 25 VEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLV 83
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D
Sbjct: 84 ADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD 143
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ PRLF+ DP+G +KAT+ G + E + + D + + L
Sbjct: 144 DNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD--MNMDAAILLGMDALYR 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 224
+ F AS +EVG+VS ++ +FR L EE++ ++ I E+
Sbjct: 201 AAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQILEK 241
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 122/210 (58%), Gaps = 5/210 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AV+ G T+IG+ KD V + +++ KL+ S+ +F I ++ +G+
Sbjct: 25 VEYAREAVRR-GTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLV 83
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ +AR EA +R YG E+ +++LAK I D Q YTQH +RP GV ++ ID
Sbjct: 84 ADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGID 143
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ RLF+ DP+G +KAT+ G + LEK+ ++D T E ++ AI+ L
Sbjct: 144 KN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD--ITLDEGLELAITALTK 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEE 213
ED K ++V +++ ++ +F+ + +EE
Sbjct: 201 A-NEDIKPENVDVCIITVKDAQFKKIPVEE 229
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 121/221 (54%), Gaps = 4/221 (1%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+
Sbjct: 25 VEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLV 83
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D
Sbjct: 84 ADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD 143
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ PRLF+ DP+G +KAT+ G + E + D + + L
Sbjct: 144 DNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNIDAAILLGMDALYK 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 224
+ F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 201 AAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 121/221 (54%), Gaps = 4/221 (1%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+
Sbjct: 23 VEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLV 81
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D
Sbjct: 82 ADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD 141
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
++ PRLF+ DP+G +KAT+ G + E K D + + + L
Sbjct: 142 DKR-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED--MNIEAAILLGMDALYK 198
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 224
+ F A +EVGVVS ++ +FR L EE+ ++ I E+
Sbjct: 199 AAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica
GN=PAB1 PE=2 SV=1
Length = 235
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IE+A AV +G TS+G++ + V + T+KK+P L+D TSV + +T +G++ +
Sbjct: 19 LVQIEHALTAV-GSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++
Sbjct: 78 GMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIA 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
D+ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI T
Sbjct: 138 GYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
L+ + A+ IE+G++ + + EF+VLS EI + L
Sbjct: 195 LKEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFL 231
>sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica
GN=PAB1 PE=2 SV=2
Length = 235
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IE+A AV +G TS+G++ + V + T+KK+P L+D TSV + +T +G++ +
Sbjct: 19 LVQIEHALTAV-GSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++
Sbjct: 78 GMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIA 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
D+ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI T
Sbjct: 138 GYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
L+ + A+ IE+G++ + + EF+VLS EI + L
Sbjct: 195 LKEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFL 231
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 128/215 (59%), Gaps = 6/215 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
++YA +AVK G T++GV+ KD V + +K+V KL++ S +F I ++ ++G+
Sbjct: 26 VQYAREAVKR-GATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGII 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV +AR EA +R YG +P+ VL K I D Q++TQ+ +RP G ++ ++
Sbjct: 85 ADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVN 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
E+ P LF+ DP+G +F KA + G A+ E+K +++ T +E ++ A+ L
Sbjct: 145 EK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE--MTLEEAIKLAVLALSK 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
+++E S IEV V+S + +F+ ++ EE+ + L
Sbjct: 201 IMEEPSPES-IEVAVISVKEKKFKKITPEEVAKCL 234
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 6/215 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+ YA +AVK G T++GV+ KD V + +K++ +L++ S +F I ++ ++G+
Sbjct: 26 VNYAREAVKR-GATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGII 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++ ++
Sbjct: 85 ADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
++ P L++ DP+G +F KA + G A+ E K ++D T E ++ AI L
Sbjct: 145 DK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD--MTLDEAIKLAIFALAK 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
+++ A IEV V++ ++ +FR LS EEI++ L
Sbjct: 201 TMEKP-SAENIEVAVITVKDKKFRKLSKEEIEKFL 234
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 126/216 (58%), Gaps = 6/216 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+ YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+
Sbjct: 26 VNYAREAVKR-GATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGII 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++ ++
Sbjct: 85 ADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
E+ P L++ DP+G +F KA + G A+ E+K K+D + +E ++ AI L
Sbjct: 145 EK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD--MSLEEAIKLAIFALAK 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 219
+++ A IEV +++ ++ +FR LS EEI+++L
Sbjct: 201 TMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLN 235
>sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1
PE=1 SV=1
Length = 235
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 126/221 (57%), Gaps = 5/221 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IE+A AV +G TS+G++ + V + T+KK+P L+D SV + +T +G++ +
Sbjct: 19 LVQIEHALTAV-GSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV +V
Sbjct: 78 GMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVA 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
D++ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI T
Sbjct: 138 GYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
L+ + + + IE+G + + FRVL+ EID++L +
Sbjct: 195 LKEGFEGEISSKNIEIGKIGADK-VFRVLTPAEIDDYLAEV 234
>sp|P25787|PSA2_HUMAN Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2
Length = 234
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IEYA AV A G S+G++ + V + T+KK L D SV + PITK++GL+ +
Sbjct: 19 LVQIEYALAAV-AGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV +AR A ++ Y +P L + +A Q YTQ +RP GV ++
Sbjct: 78 GMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIC 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
+ E P LF+ DP+G +F KAT+ G FLEK+ D ++ + TAI T
Sbjct: 138 GWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED--LELEDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 222
L+ + IEVG+ ++ FR L+ E+ ++L AI+
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVKDYLAAIA 234
>sp|Q3T0Y5|PSA2_BOVIN Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3
Length = 234
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IEYA AV A G S+G++ + V + T+KK L D SV + PITK++GL+ +
Sbjct: 19 LVQIEYALAAV-AGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV +AR A ++ Y +P L + +A Q YTQ +RP GV ++
Sbjct: 78 GMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIC 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
+ E P LF+ DP+G +F KAT+ G FLEK+ D ++ + TAI T
Sbjct: 138 GWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED--LELEDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 222
L+ + IEVG+ ++ FR L+ E+ ++L AI+
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVKDYLAAIA 234
>sp|Q54DM7|PSA2_DICDI Proteasome subunit alpha type-2 OS=Dictyostelium discoideum
GN=psmA2 PE=3 SV=1
Length = 232
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 133/218 (61%), Gaps = 6/218 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IE+A +A A+G ++IG++ K+ V ++T+KK+ L+D TSV + IT+ +GL+
Sbjct: 18 LVQIEHALQAA-ASGGSAIGIKAKNGVVLITEKKL-HSLVDVTSVQKISMITENIGLVYA 75
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D+R L+++AR E+ ++ +Y ++PV L + +A Q +TQ +RP GV +V
Sbjct: 76 GMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVA 135
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
DE+ GP L++ DP+G +F KAT+ G + FLEK+ +D ++ +QTA+ T
Sbjct: 136 GFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDD--LEIEDAIQTALIT 192
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
++ + +E+ ++ K N EF++L+ +I ++L
Sbjct: 193 IKEGFETQLTEFNMELAIIGK-NQEFKILTPAQIKDYL 229
>sp|P17220|PSA2_RAT Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1
SV=3
Length = 234
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IEYA AV A G S+G++ + V + T+KK L D SV + PITK++GL+ +
Sbjct: 19 LVQIEYALAAV-AGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV +AR A ++ Y +P L + +A Q YTQ +RP GV ++
Sbjct: 78 GMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIC 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
+ E P LF+ DP+G +F KAT+ G FLEK+ D ++ + TAI T
Sbjct: 138 GWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED--LELEDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 222
L+ + IEVG+ ++ FR L+ E+ ++L AI+
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVRDYLAAIA 234
>sp|P49722|PSA2_MOUSE Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=3
Length = 234
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IEYA AV A G S+G++ + V + T+KK L D SV + PITK++GL+ +
Sbjct: 19 LVQIEYALAAV-AGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV +AR A ++ Y +P L + +A Q YTQ +RP GV ++
Sbjct: 78 GMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIC 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
+ E P LF+ DP+G +F KAT+ G FLEK+ D ++ + TAI T
Sbjct: 138 GWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED--LELEDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 222
L+ + IEVG+ ++ FR L+ E+ ++L AI+
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVRDYLAAIA 234
>sp|Q8L4A7|PSA2B_ARATH Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 235
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 125/221 (56%), Gaps = 5/221 (2%)
Query: 1 MILIEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLAT 60
++ IE+A AV +G TS+G++ + V + T+KK+P L+D SV + +T +G + +
Sbjct: 19 LVQIEHALTAV-GSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYS 77
Query: 61 GMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL 120
GM D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV +V
Sbjct: 78 GMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVA 137
Query: 121 SIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 180
D++ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI T
Sbjct: 138 GYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILT 194
Query: 181 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
L+ + + + IE+G + + FRVL+ EID++L +
Sbjct: 195 LKEGFEGEISSKNIEIGKIGTDK-VFRVLTPAEIDDYLAEV 234
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 126/216 (58%), Gaps = 6/216 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+ YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+
Sbjct: 26 VNYAREAVKR-GATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGII 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV +AR EA +R YG PV V+ K I D Q++TQ+ +RP G ++ I+
Sbjct: 85 ADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGIN 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ P L++ DP+G +F KA + G A+ E+K ++D ++ ++ A+ L
Sbjct: 145 DR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD--MNLEDAIKLALMALAK 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 219
+ E+ A IEV V++ ++ +FR L+ +EI+++L+
Sbjct: 201 TM-ENPSADNIEVAVITVKDKKFRKLTRDEIEKYLS 235
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+
Sbjct: 26 VEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLV 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID
Sbjct: 85 ADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L S
Sbjct: 145 RHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED--MTVNEGMELALYAL-S 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
E+ K I++ +V +S++EI++ + A+
Sbjct: 201 KTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ D + ++ K+V KLL+ +S+ +F I ++G+ ++G+
Sbjct: 25 VEYAREAVKR-GTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLV 83
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
DAR+LV +AR E+ R Y ++ V++L+K + D Q YTQ RP G ++ I
Sbjct: 84 GDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGI- 142
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ RLF+ DP+G +KAT G+ + E++ +P + ++ + + L +
Sbjct: 143 SDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEY--NPEASIRDAILLGLKALHA 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEI 214
+ F + +E+GVV+ + P FR +S +E+
Sbjct: 201 ATEGKFDVNTVEIGVVNNDTPAFRKMSRQEV 231
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 125/220 (56%), Gaps = 7/220 (3%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
++YAF+AVK G T++GV+ K++V ++ +KK +LLD S+ +F + ++G G+
Sbjct: 26 VDYAFEAVKK-GWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLA 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
+D R L+ AR + + R Y + +D L K I+D Q+YTQH +RP GV +V +D
Sbjct: 85 SDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVD 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+LF +P+G F ++A + G A ++LEK K D + +ET+ A++ L+
Sbjct: 145 RGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED--LSVEETILLALNALKV 201
Query: 184 VLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
L+ E +E+G +KE +FR +++EE +L I
Sbjct: 202 TLKPGEKLGPGNVEIGFATKEG-QFRKMTLEERANYLQKI 240
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 127 bits (319), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+
Sbjct: 26 VEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLV 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID
Sbjct: 85 ADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L S
Sbjct: 145 RHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMTVNEGMELALYAL-S 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
E+ K I++ +V +S++EI++ + A+
Sbjct: 201 KTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G TS+GV+ K+ + +V K+ KL++ S+ +F I +++G +G+
Sbjct: 25 VEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLV 83
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR ++++AR EA R Y + V+ LAK I D Q+YTQH +RP G ++ ++
Sbjct: 84 ADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVN 143
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
G RLF+ DP+G +KAT+ G A+ EKK +D + ++ A+ +
Sbjct: 144 GR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD--MNLNQAIELALDAVYE 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
+ +E+ V+ + ++R L +EI +H+
Sbjct: 201 ATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHV 235
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+
Sbjct: 26 VEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLV 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID
Sbjct: 85 ADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L S
Sbjct: 145 RHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMTVSEGMELALYAL-S 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
E+ K I++ ++ +S++EI++ + A+
Sbjct: 201 KTTEELKPENIDMAIIKDSGKLVEKISVDEIEKIVKAV 238
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 124/221 (56%), Gaps = 5/221 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T+IG++ K+ V ++ K+V KLL+ ++ ++ I +++ +G+
Sbjct: 24 VEYAREAVKR-GATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLV 82
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ +AR EA R Y + V LAK I D Q YTQ+ +RP GV ++ +D
Sbjct: 83 ADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVD 142
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
E P+L++ DP+G +KAT+ G+ F EK+ ++D +F + + + +
Sbjct: 143 EV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD--LSFDDAMVLGLVAMGL 198
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 224
++ + IEVG V ++ F+ +S EE+ ++ +ER
Sbjct: 199 SIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANER 239
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 126/218 (57%), Gaps = 11/218 (5%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ + V +++ KK+ KL++ S+ + I Y+ + +G+
Sbjct: 24 VEYAREAVKK-GSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLV 82
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV + ID
Sbjct: 83 ADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID 142
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ GPRLF CDPAG +KAT+ G + ++FLEK+ K + +E V I L++
Sbjct: 143 -QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKE--GLSEKEAVTLGIKALKA 199
Query: 184 VLQ--EDFKASEI-EVGVVSKENPEFRVLSIEEIDEHL 218
L+ E+ KA EI + V SK +R+ EE+ + L
Sbjct: 200 SLEEGEELKAPEIASITVGSK----YRIYGAEEVKKFL 233
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ + V +++ KKV +L++ S+ + I Y+ + +G+
Sbjct: 24 VEYAREAVKK-GSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLV 82
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV + ID
Sbjct: 83 ADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID 142
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ GPRLF CDPAG +KAT+ G + ++FLE++ K + +E V I L+S
Sbjct: 143 -QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKEN--LPEKEAVTLGIKALKS 199
Query: 184 VLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
L+ E+ KA EI V ++R+ EE+ + L
Sbjct: 200 SLEEGEELKAPEIASITVGN---KYRIYDQEEVKKFL 233
>sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2
Length = 247
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 129/227 (56%), Gaps = 13/227 (5%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +A+K G T IG++ K+ V + +K++ L+ +S+ + I ++G +G+T
Sbjct: 24 VEYATEAMKL-GSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSGLT 82
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHA-----YMRPLGVVAM 118
ADARTL+ AR EA RF Y + V+V+A+ I+D S + + + RP GV +
Sbjct: 83 ADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALL 142
Query: 119 VLSIDEECGPRLFKCDPAGHF--FGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQT 176
+ +D E GPRLF+ DP+G F F KAT AG + ++I L +K + + T +E
Sbjct: 143 IAGVD-ETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSI--LHEKY--NKSMTLREAEIL 197
Query: 177 AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 223
A+STL+ V++E + +EV +V+ E +F ++ I+ + I E
Sbjct: 198 ALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLIGEIKE 244
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 5/212 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
++YAF+AVK G T++GV+ K V ++ +K+ +LLD S+ +F + ++G G+
Sbjct: 26 VDYAFEAVKK-GWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLA 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
+D R L+ AR +A + R Y + +D L K ++D Q+YTQH +RP GV ++ ID
Sbjct: 85 SDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
P+L +P+G F + A + G A + EK + D Q+T+ I L S
Sbjct: 145 RGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED--LNMQDTILLGIRALAS 202
Query: 184 VLQ--EDFKASEIEVGVVSKENPEFRVLSIEE 213
L+ E S IEVG ++ FR +S EE
Sbjct: 203 TLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
>sp|A3CW55|PSA_METMJ Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1
Length = 240
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 6/221 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ + V ++ K+V +LL+ S+ +F I ++G+ ++G+
Sbjct: 25 VEYAREAVKR-GTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLV 83
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSI- 122
DAR+LV +AR E+ R Y + V++LAK + D Q YTQ RP G ++ +
Sbjct: 84 GDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVS 143
Query: 123 DEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQ 182
D E RLF+ DP+G +KAT G I E + + D F+ ++ I L
Sbjct: 144 DGEA--RLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFS--GAIRLGIKALH 199
Query: 183 SVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 223
+ + S IE+GVVS E EFR + +E+ ++ E
Sbjct: 200 AATEGKLDVSAIEIGVVSIETGEFRKMEKDEVKAYVDQFEE 240
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 119/217 (54%), Gaps = 6/217 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
++YAF+AVK G T+IG++ K SV + ++K+ LLD S+ +F I ++G G+
Sbjct: 26 VDYAFEAVKK-GWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLA 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
+D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID
Sbjct: 85 SDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
+ P+LF +P+G + ++A + G A FLEK K D +ET+ A+ L +
Sbjct: 145 KSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LNVEETILLALKALSA 201
Query: 184 VLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 218
L+ E + +E+G S + F ++ E+ + +L
Sbjct: 202 TLKPNEKLTPNTVEIGYASTQTGLFLKMTNEDKNMYL 238
>sp|Q6L0W3|PSA_PICTO Proteasome subunit alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=psmA
PE=3 SV=1
Length = 234
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 5/216 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AVK G T++G++ KD V ++++KKV +L++ TS+ + I + + +G+
Sbjct: 24 VEYAREAVKK-GSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLV 82
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ AR + + YG M ++ L K +AD+ Q YTQ+ +RP GV + +D
Sbjct: 83 ADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLD 142
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
GPRLF CDPAG +K S G + + +LEK+ K + + E ++ I+ L+S
Sbjct: 143 -SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKEN--LSEDEAIRMGIAALKS 199
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 219
+ ++ E E+ + K F V + EE+ ++L
Sbjct: 200 AVADESSMKEPEIASI-KMGETFHVFTSEEVSKYLN 234
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+ YA +AVK G T++GV+ KD V + +K++ KL++ +S +F I ++ +G+
Sbjct: 26 VNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGII 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++
Sbjct: 85 ADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
E+ P LF+ DP+G +F KA + G A+ E+ ++D + ++ AI L
Sbjct: 145 EK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD--IGKDDAIKLAILALAK 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
L+E A IEV ++ + ++ L EE++++L I
Sbjct: 201 TLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 4 IEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMT 63
+EYA +AV+ G T++G++ D V + +++ KL+D +S+ +F I ++ +G+
Sbjct: 26 VEYAREAVRR-GTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLV 84
Query: 64 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 123
ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID
Sbjct: 85 ADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGID 144
Query: 124 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 183
RLF+ DP+G +KAT+ G A+ LE K D E ++ A+ L S
Sbjct: 145 RHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMIVSEGMELALYAL-S 200
Query: 184 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 221
E+ K I++ +V +S++EI++ + A+
Sbjct: 201 KTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,923,299
Number of Sequences: 539616
Number of extensions: 2903226
Number of successful extensions: 8450
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 8048
Number of HSP's gapped (non-prelim): 266
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)