Your job contains 1 sequence.
>027325
MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIRQKRKDRALL
ALKKKRAQEELLKQVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLED
VQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSE
EQEKLDLPNVPTKVPVASRVVADDAEIAPAEASTKRRVMEEPLPA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027325
(225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184767 - symbol:VPS20.2 "vacuolar protein sor... 726 8.6e-72 1
ZFIN|ZDB-GENE-040924-2 - symbol:chmp6b "chromatin modifyi... 297 2.5e-26 1
FB|FBgn0034744 - symbol:Vps20 "Vacuolar protein sorting 2... 283 7.6e-25 1
UNIPROTKB|Q5ZL55 - symbol:CHMP6 "Charged multivesicular b... 271 1.4e-23 1
DICTYBASE|DDB_G0287021 - symbol:vps20 "SNF7 family protei... 270 1.8e-23 1
ASPGD|ASPL0000059099 - symbol:vps20 species:162425 "Emeri... 259 2.6e-22 1
UNIPROTKB|Q148L0 - symbol:CHMP6 "Chromatin modifying prot... 258 3.4e-22 1
UNIPROTKB|F1NBY7 - symbol:CHMP6 "Charged multivesicular b... 250 2.4e-21 1
UNIPROTKB|Q96FZ7 - symbol:CHMP6 "Charged multivesicular b... 248 3.9e-21 1
POMBASE|SPBC215.14c - symbol:vps20 "ESCRT III complex sub... 244 1.0e-20 1
MGI|MGI:3583942 - symbol:Chmp6 "charged multivesicular bo... 243 1.3e-20 1
RGD|1565325 - symbol:Chmp6 "charged multivesicular body p... 241 2.1e-20 1
WB|WBGene00022027 - symbol:vps-20 species:6239 "Caenorhab... 241 2.1e-20 1
UNIPROTKB|G4MKC0 - symbol:MGG_02515 "Charged multivesicul... 236 7.2e-20 1
CGD|CAL0002935 - symbol:VPS20 species:5476 "Candida albic... 228 5.1e-19 1
UNIPROTKB|Q5AH99 - symbol:CaO19.8516 "Putative uncharacte... 228 5.1e-19 1
UNIPROTKB|F1PRE3 - symbol:CHMP6 "Uncharacterized protein"... 209 5.3e-17 1
UNIPROTKB|F1RZY6 - symbol:CHMP6 "Uncharacterized protein"... 199 6.0e-16 1
UNIPROTKB|I3L4A1 - symbol:CHMP6 "Charged multivesicular b... 188 8.8e-15 1
SGD|S000004682 - symbol:VPS20 "Myristoylated subunit of E... 141 2.9e-14 2
SGD|S000004015 - symbol:SNF7 "Subunit of the ESCRT-III co... 156 2.2e-11 1
CGD|CAL0005125 - symbol:SNF7 species:5476 "Candida albica... 155 2.8e-11 1
UNIPROTKB|Q5ABD0 - symbol:SNF7 "Vacuolar-sorting protein ... 155 2.8e-11 1
UNIPROTKB|Q9BY43 - symbol:CHMP4A "Charged multivesicular ... 154 3.5e-11 1
UNIPROTKB|Q14D22 - symbol:CHMP4A "Charged multivesicular ... 154 5.9e-11 1
UNIPROTKB|I3L3E4 - symbol:CHMP6 "Charged multivesicular b... 151 7.4e-11 1
UNIPROTKB|A2VDY3 - symbol:CHMP4A "Charged multivesicular ... 150 9.4e-11 1
TAIR|locus:2119956 - symbol:SNF7.1 species:3702 "Arabidop... 150 9.4e-11 1
UNIPROTKB|I3L4G8 - symbol:CHMP6 "Charged multivesicular b... 148 1.5e-10 1
TAIR|locus:2051970 - symbol:SNF7.2 species:3702 "Arabidop... 148 1.5e-10 1
UNIPROTKB|E9PQ80 - symbol:CHMP4A "Charged multivesicular ... 144 1.0e-09 1
UNIPROTKB|Q5ZHP5 - symbol:CHMP4B "Charged multivesicular ... 145 1.1e-09 1
UNIPROTKB|E9PSI1 - symbol:TM9SF1 "Transmembrane 9 superfa... 148 2.8e-09 1
UNIPROTKB|P59074 - symbol:CGI-301 "Putative protein CGI-3... 131 9.7e-09 1
DICTYBASE|DDB_G0275573 - symbol:vps32 "SNF7 family protei... 136 4.1e-08 1
UNIPROTKB|E2RDX2 - symbol:CHMP4B "Uncharacterized protein... 136 5.4e-08 1
FB|FBgn0086656 - symbol:shrb "shrub" species:7227 "Drosop... 136 5.6e-08 1
WB|WBGene00020025 - symbol:R12C12.5 species:6239 "Caenorh... 136 7.0e-08 1
POMBASE|SPAC1142.07c - symbol:vps32 "ESCRT III complex su... 134 1.1e-07 1
UNIPROTKB|Q9H444 - symbol:CHMP4B "Charged multivesicular ... 134 1.1e-07 1
MGI|MGI:1922858 - symbol:Chmp4b "charged multivesicular b... 134 1.1e-07 1
UNIPROTKB|F1S4Z2 - symbol:CHMP4B "Uncharacterized protein... 132 2.3e-07 1
UNIPROTKB|Q08E32 - symbol:CHMP4B "CHMP4B protein" species... 130 4.2e-07 1
UNIPROTKB|F1PAK4 - symbol:TM9SF1 "Uncharacterized protein... 138 4.3e-07 1
RGD|1564543 - symbol:Chmp4c "charged multivesicular body ... 130 4.9e-07 1
MGI|MGI:1913621 - symbol:Chmp4c "charged multivesicular b... 128 9.5e-07 1
ZFIN|ZDB-GENE-050417-389 - symbol:chmp4c "chromatin modif... 128 1.1e-06 1
UNIPROTKB|I3LG19 - symbol:CHMP4C "Uncharacterized protein... 122 1.4e-06 1
UNIPROTKB|F1SGN5 - symbol:TM9SF1 "Uncharacterized protein... 132 3.2e-06 1
ZFIN|ZDB-GENE-040426-2812 - symbol:chmp4b "chromatin modi... 123 4.0e-06 1
ZFIN|ZDB-GENE-040426-906 - symbol:zgc:56112 "zgc:56112" s... 122 4.9e-06 1
RGD|1309846 - symbol:Chmp4b "charged multivesicular body ... 122 5.3e-06 1
RGD|1583604 - symbol:Chmp4bl1 "chromatin modifying protei... 122 5.3e-06 1
WB|WBGene00016497 - symbol:vps-32.2 species:6239 "Caenorh... 116 2.9e-05 1
UNIPROTKB|E2R7B4 - symbol:CHMP4C "Uncharacterized protein... 116 3.8e-05 1
UNIPROTKB|A6H704 - symbol:CHMP7 "Uncharacterized protein"... 117 0.00011 1
UNIPROTKB|P0C149 - symbol:SNF7 "Vacuolar-sorting protein ... 112 0.00011 1
DICTYBASE|DDB_G0277133 - symbol:DDB_G0277133 "SNF7 family... 113 0.00012 2
ZFIN|ZDB-GENE-040426-1750 - symbol:chmp7 "CHMP family, me... 116 0.00015 1
ASPGD|ASPL0000017567 - symbol:vps32 species:162425 "Emeri... 111 0.00017 1
UNIPROTKB|E1C252 - symbol:CHMP4C "Uncharacterized protein... 109 0.00024 1
WB|WBGene00016961 - symbol:vps-32.1 species:6239 "Caenorh... 108 0.00032 1
UNIPROTKB|Q96CF2 - symbol:CHMP4C "Charged multivesicular ... 106 0.00066 1
UNIPROTKB|G4NFA2 - symbol:MGG_04174 "SNF7 family protein"... 110 0.00085 1
POMBASE|SPCC162.06c - symbol:SPCC162.06c "vacuolar sortin... 104 0.00087 1
>TAIR|locus:2184767 [details] [associations]
symbol:VPS20.2 "vacuolar protein sorting-associated
protein 20.2" species:3702 "Arabidopsis thaliana" [GO:0005737
"cytoplasm" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
EMBL:AL391712 GO:GO:0000815 eggNOG:NOG291677 HOGENOM:HOG000208642
KO:K12195 EMBL:BT010522 EMBL:AK175654 IPI:IPI00521076
RefSeq:NP_196488.1 UniGene:At.32537 ProteinModelPortal:Q9FY89
SMR:Q9FY89 IntAct:Q9FY89 STRING:Q9FY89 PaxDb:Q9FY89 PRIDE:Q9FY89
EnsemblPlants:AT5G09260.1 GeneID:830785 KEGG:ath:AT5G09260
TAIR:At5g09260 InParanoid:Q9FY89 OMA:IVEDMPE PhylomeDB:Q9FY89
ProtClustDB:CLSN2687484 Genevestigator:Q9FY89 Uniprot:Q9FY89
Length = 216
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 159/226 (70%), Positives = 172/226 (76%)
Query: 1 MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXX 60
MGNLFVKKPKIT+VDRAILSLKTQRRKL QYQQQL+ VIEAEKQAARDLI
Sbjct: 1 MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60
Query: 61 XXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLED 120
VD WLINVEQQLADIEL SKQKAVFESLK G NAIKAIQSE+NL+D
Sbjct: 61 ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120
Query: 121 VQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPT-EGPS 179
VQKLMDDT EAKAYQDE++AILGEKLSAEDEEEILAEFDNLE+ L V++MPEVPT E
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP 180
Query: 180 EEQEKLDLPNVPTKVPVASRVVADDAEIAPAEASTKRRVMEEPLPA 225
EE EK+DLP+VPTK PVAS STKR+V+EEPL A
Sbjct: 181 EEPEKMDLPDVPTKAPVASNETT----------STKRKVLEEPLEA 216
>ZFIN|ZDB-GENE-040924-2 [details] [associations]
symbol:chmp6b "chromatin modifying protein 6b"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040924-2 GO:GO:0031902 GO:GO:0015031 GO:GO:0012505
eggNOG:NOG291677 HOGENOM:HOG000208642 HOVERGEN:HBG080510 KO:K12195
OrthoDB:EOG4DBTG6 EMBL:AY648810 EMBL:BC095171 IPI:IPI00481351
RefSeq:NP_001003874.1 UniGene:Dr.77489 ProteinModelPortal:Q503V0
STRING:Q503V0 GeneID:445397 KEGG:dre:445397 CTD:445397
InParanoid:Q503V0 NextBio:20832102 Bgee:Q503V0 Uniprot:Q503V0
Length = 206
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 69/201 (34%), Positives = 110/201 (54%)
Query: 1 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
MGNLF KK ++T+ DRA+L LK QR KL QYQ+++ + ++ E+Q A+ L+
Sbjct: 1 MGNLFGKKKATRVTEQDRAVLQLKQQRDKLKQYQKRITLQMDKERQLAKQLLKDGKKDKA 60
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
+ + N+E+ + DIE A + V E LK G + +K + +++
Sbjct: 61 LLLLKKKRYQDQLLEKTENQISNLERMVQDIEFAQIEMKVIEGLKVGNDCLKKMHEVLSI 120
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGP 178
E+V+K+MD+T +A YQ +I+ +L L+ EDEE +LAE + + A E+PEVP E
Sbjct: 121 EEVEKIMDETHDAIEYQKQIDEMLAGSLTQEDEEAVLAELEAITQGEADLELPEVPGE-- 178
Query: 179 SEEQEKLDLPNVPTKVPVASR 199
+LP VP + PV +
Sbjct: 179 -------ELPEVPEQEPVREK 192
>FB|FBgn0034744 [details] [associations]
symbol:Vps20 "Vacuolar protein sorting 20" species:7227
"Drosophila melanogaster" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 EMBL:AE013599
GO:GO:0015031 KO:K12195 OMA:DAITQEQ GeneTree:ENSGT00530000063571
RefSeq:NP_611686.2 RefSeq:NP_726213.1 GeneID:37581
KEGG:dme:Dmel_CG4071 CTD:37581 FlyBase:FBgn0034744 ChiTaRS:CHMP6
GenomeRNAi:37581 NextBio:804396 ProteinModelPortal:Q9W236
SMR:Q9W236 IntAct:Q9W236 MINT:MINT-294316 STRING:Q9W236
PRIDE:Q9W236 EnsemblMetazoa:FBtr0071856 EnsemblMetazoa:FBtr0308602
UCSC:CG4071-RA InParanoid:Q9W236 PhylomeDB:Q9W236
ArrayExpress:Q9W236 Bgee:Q9W236 Uniprot:Q9W236
Length = 212
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 70/212 (33%), Positives = 112/212 (52%)
Query: 1 MGNLFVKKPK------ITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXX 54
MG LF K K ITD D+A+L LK QR +L QYQ++++ +E ++ AR +
Sbjct: 1 MGALFGKTSKKTAPSRITDQDKAVLQLKQQRDRLKQYQKRIETQLENDRLLARKCLQQGR 60
Query: 55 XXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQS 114
D L N+E+ ADIE A + V + LK+G A+K +
Sbjct: 61 KDRAKLLLRKKKYQESLLTNADKQLENLEKLAADIEFAQVEMKVLDGLKAGNAALKKVHE 120
Query: 115 EINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQ---EMP 171
+++++V+++MD+T E Q EI+AIL + L+ +DEE++LAE D LEA+ Q ++P
Sbjct: 121 MLDIDEVERIMDETREGIEKQQEIDAILTDVLTTQDEEDVLAELDALEAEEEQQKGAQLP 180
Query: 172 EVPTEGPSEEQEKLDLPNVPTKVPVASRVVAD 203
+VPTE E ++ P K +V+ +
Sbjct: 181 DVPTEDLPIPAE-IESVEEPAKTKATKKVLVE 211
>UNIPROTKB|Q5ZL55 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0031902 GO:GO:0015031 GO:GO:0012505
EMBL:AJ719879 IPI:IPI00585289 RefSeq:NP_001026700.1
UniGene:Gga.6206 ProteinModelPortal:Q5ZL55 STRING:Q5ZL55
GeneID:428673 KEGG:gga:428673 CTD:79643 eggNOG:NOG291677
HOGENOM:HOG000208642 HOVERGEN:HBG080510 InParanoid:Q5ZL55 KO:K12195
OrthoDB:EOG4DBTG6 NextBio:20829603 ArrayExpress:Q5ZL55
Uniprot:Q5ZL55
Length = 200
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 65/202 (32%), Positives = 109/202 (53%)
Query: 1 MGNLFVKK--PKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
MGNLF +K ++T+ D+A+L LK QR KL QYQ+++ + +E E++ AR L+
Sbjct: 1 MGNLFGRKRRSRVTEQDKAVLQLKQQRDKLRQYQKRISLGLERERELARQLLKEGKKEKA 60
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
D + N+E+ + DIE + V E LK G + + +++
Sbjct: 61 MLLLKKKRYQEQLLDKTDNQISNLERMVQDIEFTQIEMKVIEGLKIGNECLNKMHQVMSI 120
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNL-EAQLAVQEMPEVPTEG 177
E+V++++ +T++A YQ +I+ IL L+ EDE+ IL E + + + QL E+P+VP+E
Sbjct: 121 EEVERIIGETQDAVEYQRQIDEILAGSLTEEDEDAILEELNAITQEQL---ELPDVPSEP 177
Query: 178 -PSEEQEKLDLPNVPTKVPVAS 198
P E E + N P VA+
Sbjct: 178 LPEEPPEATPVKNRPKPELVAA 199
>DICTYBASE|DDB_G0287021 [details] [associations]
symbol:vps20 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0287021 GenomeReviews:CM000153_GR GO:GO:0015031
EMBL:AAFI02000095 GO:GO:0000815 eggNOG:NOG291677 KO:K12195
RefSeq:XP_637438.1 STRING:Q54KZ4 PRIDE:Q54KZ4
EnsemblProtists:DDB0234035 GeneID:8625906 KEGG:ddi:DDB_G0287021
InParanoid:Q54KZ4 Uniprot:Q54KZ4
Length = 218
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 69/184 (37%), Positives = 101/184 (54%)
Query: 7 KKPKITDVDRAILSLKTQRRKLAQYQQQ-LDVVIEAEKQAARDLIXXXXXXXXXXXXXXX 65
K+ KI+ DRA+L+LK QR KL YQ Q L++ I E A
Sbjct: 14 KEDKISKTDRAVLNLKIQRDKLKNYQTQVLEIAIAKECSKAGKKNQALLALKKKKYQEKM 73
Query: 66 XXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLM 125
L N+E+ +A++E A Q +FESLK G ++K IQ E++LEDV+ LM
Sbjct: 74 LDESFAN------LQNIEELIANVEQAEIQVRIFESLKQGNESLKEIQKEMSLEDVENLM 127
Query: 126 DDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVP-TEGPSEEQEK 184
++T EA YQ++I+ L K S E+E+++L E D +E QL Q+ P+VP T+ P K
Sbjct: 128 EETAEAIQYQNDISEALSGKFSKEEEDDLLNELDEMEKQLNAQQYPKVPETQLP-----K 182
Query: 185 LDLP 188
++LP
Sbjct: 183 IELP 186
>ASPGD|ASPL0000059099 [details] [associations]
symbol:vps20 species:162425 "Emericella nidulans"
[GO:0070676 "intralumenal vesicle formation" evidence=IEA]
[GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005938 "cell cortex"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 EMBL:BN001308 GO:GO:0015031
HOGENOM:HOG000208642 OMA:DAITQEQ EnsemblFungi:CADANIAT00001246
Uniprot:C8VRW4
Length = 208
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 67/202 (33%), Positives = 102/202 (50%)
Query: 1 MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXX 60
MGN KI+ DRAIL +K QR KL +YQ+++ V+ + E A++ +
Sbjct: 1 MGNTN-SSHKISSQDRAILDMKNQRDKLQKYQKRITVLTDRETAIAKECLARNDRKRALL 59
Query: 61 XXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEIN-LE 119
D L +EQ + +E A QK V L+ GT ++ I E+ +E
Sbjct: 60 ALRRKKYQESLLAKTDAQLAQLEQLTSQVEFALVQKDVLYGLQQGTQVLQMINKEMGGIE 119
Query: 120 DVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNL--EAQLAVQEMPEVPTEG 177
V+KL+ +TEEA+AYQ+EI+ +L LS +DE+E+ E + L EAQ V +P VPT
Sbjct: 120 GVEKLLGETEEARAYQEEISQMLAGNLSNQDEDEVEDELEALQREAQGPVS-LPNVPTAP 178
Query: 178 PSEEQEKLDLPNVPTKVPVASR 199
P E + +L + +R
Sbjct: 179 PEVETPEEELKKQKARAKARAR 200
>UNIPROTKB|Q148L0 [details] [associations]
symbol:CHMP6 "Chromatin modifying protein 6" species:9913
"Bos taurus" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 CTD:79643 eggNOG:NOG291677
HOGENOM:HOG000208642 HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6
OMA:DAITQEQ GeneTree:ENSGT00530000063571 EMBL:DAAA02049440
EMBL:BC118185 IPI:IPI00705933 RefSeq:NP_001068925.1
UniGene:Bt.26731 STRING:Q148L0 Ensembl:ENSBTAT00000018623
GeneID:510596 KEGG:bta:510596 InParanoid:Q148L0 NextBio:20869528
Uniprot:Q148L0
Length = 201
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 63/201 (31%), Positives = 105/201 (52%)
Query: 1 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
MGNLF +K ++T+ D+AIL LK QR KL QYQ+++ +E E++ AR L+
Sbjct: 1 MGNLFGRKKQSRVTEQDKAILQLKQQRDKLKQYQKRITQQLEREREIARQLLRDGRKERA 60
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
+ + ++E + IE + V E LK G + + +++
Sbjct: 61 KLLLKKKRYREQLLDKTENQITSLETMVQSIEFTQIEMKVIEGLKIGNECLNKMHQVMSI 120
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGP 178
E+V++++D+T+EA YQ +I+ +L + EDE+ IL E D + + E+P VP+E P
Sbjct: 121 EEVERILDETQEAVDYQRQIDELLAGSFTQEDEDAILEELDAITQEQI--ELPAVPSE-P 177
Query: 179 SEEQEKLDLPNVPTKVPVASR 199
E+ +P KVPV +R
Sbjct: 178 LPEK-------IPEKVPVKAR 191
>UNIPROTKB|F1NBY7 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
IPI:IPI00585289 OMA:DAITQEQ GeneTree:ENSGT00530000063571
EMBL:AADN02053516 Ensembl:ENSGALT00000031461 ArrayExpress:F1NBY7
Uniprot:F1NBY7
Length = 197
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 63/202 (31%), Positives = 107/202 (52%)
Query: 1 MGNLFVKK--PKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
MGNLF +K ++T+ D+A+L QR KL QYQ+++ + +E E++ AR L+
Sbjct: 1 MGNLFGRKRRSRVTEQDKAVLQ---QRDKLRQYQKRISLGLERERELARQLLKEGKKEKA 57
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
D + N+E+ + DIE + V E LK G + + +++
Sbjct: 58 MLLLKKKRYQEQLLDKTDNQISNLERMVQDIEFTQIEMKVIEGLKIGNECLNKMHQVMSI 117
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNL-EAQLAVQEMPEVPTEG 177
E+V++++ +T++A YQ +I+ IL L+ EDE+ IL E + + + QL E+P+VP+E
Sbjct: 118 EEVERIIGETQDAVEYQRQIDEILAGSLTEEDEDAILEELNAITQEQL---ELPDVPSEP 174
Query: 178 -PSEEQEKLDLPNVPTKVPVAS 198
P E E + N P VA+
Sbjct: 175 LPEEPPEATPVKNRPKPELVAA 196
>UNIPROTKB|Q96FZ7 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0012505 GO:GO:0016197
GO:GO:0016044 CTD:79643 eggNOG:NOG291677 HOGENOM:HOG000208642
HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6 EMBL:AY329087
EMBL:AK021811 EMBL:CR457284 EMBL:AK223187 EMBL:AK292105
EMBL:BC010108 IPI:IPI00305423 RefSeq:NP_078867.2 UniGene:Hs.514560
PDB:2K3W PDB:3HTU PDBsum:2K3W PDBsum:3HTU ProteinModelPortal:Q96FZ7
SMR:Q96FZ7 IntAct:Q96FZ7 MINT:MINT-5003442 STRING:Q96FZ7
PhosphoSite:Q96FZ7 DMDM:73917777 PaxDb:Q96FZ7 PRIDE:Q96FZ7
DNASU:79643 Ensembl:ENST00000325167 GeneID:79643 KEGG:hsa:79643
UCSC:uc002jyw.4 GeneCards:GC17P078965 HGNC:HGNC:25675 HPA:HPA023001
HPA:HPA024460 MIM:610901 neXtProt:NX_Q96FZ7 PharmGKB:PA142672114
InParanoid:Q96FZ7 OMA:DAITQEQ PhylomeDB:Q96FZ7
EvolutionaryTrace:Q96FZ7 GenomeRNAi:79643 NextBio:68773 Bgee:Q96FZ7
CleanEx:HS_CHMP6 Genevestigator:Q96FZ7 GermOnline:ENSG00000176108
Uniprot:Q96FZ7
Length = 201
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 64/206 (31%), Positives = 107/206 (51%)
Query: 1 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
MGNLF +K ++T+ D+AIL LK QR KL QYQ+++ +E E+ AR L+
Sbjct: 1 MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKERA 60
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
+ + ++E + IE + V E L+ G + + +++
Sbjct: 61 KLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSI 120
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGP 178
E+V++++D+T+EA YQ +I+ +L + EDE+ IL E + + E+PEVP+E P
Sbjct: 121 EEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQI--ELPEVPSE-P 177
Query: 179 SEEQEKLDLP-NVPTKV-PVASRVVA 202
E+ +P NVP K P + +VA
Sbjct: 178 LPEK----IPENVPVKARPRQAELVA 199
>POMBASE|SPBC215.14c [details] [associations]
symbol:vps20 "ESCRT III complex subunit Vps20"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPBC215.14c GO:GO:0005938
GO:GO:0005774 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000815
GO:GO:0043328 eggNOG:NOG291677 KO:K12195 OMA:DAITQEQ GO:GO:0006900
PIR:T39904 RefSeq:NP_596691.1 ProteinModelPortal:O94318
STRING:O94318 EnsemblFungi:SPBC215.14c.1 GeneID:2540725
KEGG:spo:SPBC215.14c OrthoDB:EOG46DQCG NextBio:20801847
Uniprot:O94318
Length = 226
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 61/193 (31%), Positives = 99/193 (51%)
Query: 6 VKKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXX 65
V KI D DR+ILS+K QR KL +Y ++L+ + + E AR +
Sbjct: 3 VNSSKINDKDRSILSIKEQRDKLLRYSKRLEKIEQLEIDIARKCLRDSDKRGALRALKAK 62
Query: 66 XXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLM 125
G L N+EQ L+ IE QK V L+ GTN I+ +Q+++ LE V ++
Sbjct: 63 KLYSGLITQTYGQLGNIEQLLSTIEFTLIQKDVMFGLQEGTNLIRQLQADMPLERVGRIC 122
Query: 126 DDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKL 185
+D +EA +Y DE+N +L ++S + E+EI E D+L + +++ ++ G +
Sbjct: 123 NDRDEAMSYVDEVNDMLQGRMSRDQEDEIQEELDSLIREQEDEKVKDLEKPGFTPSTGVD 182
Query: 186 DLPNVPTKVPVAS 198
LP+VP K + S
Sbjct: 183 VLPSVPLKNAIPS 195
>MGI|MGI:3583942 [details] [associations]
symbol:Chmp6 "charged multivesicular body protein 6"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=ISO] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:3583942 GO:GO:0031902 GO:GO:0015031
GO:GO:0012505 HOGENOM:HOG000238748 CTD:79643 eggNOG:NOG291677
HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6 OMA:DAITQEQ
EMBL:BI157958 IPI:IPI00110956 RefSeq:NP_001078967.1
UniGene:Mm.306673 ProteinModelPortal:P0C0A3 SMR:P0C0A3
STRING:P0C0A3 PhosphoSite:P0C0A3 PaxDb:P0C0A3 PRIDE:P0C0A3
Ensembl:ENSMUST00000026434 GeneID:208092 KEGG:mmu:208092
GeneTree:ENSGT00530000063571 InParanoid:P0C0A3 NextBio:372136
Bgee:P0C0A3 CleanEx:MM_CHMP6 Genevestigator:P0C0A3
GermOnline:ENSMUSG00000025371 Uniprot:P0C0A3
Length = 200
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 59/195 (30%), Positives = 100/195 (51%)
Query: 1 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
MGNLF +K ++T+ DRAIL LK QR KL QYQ+++ +E E+ AR L+
Sbjct: 1 MGNLFGRKKQSRVTEQDRAILQLKQQRDKLRQYQKRVTQQLERERALARQLLRDGRKERA 60
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
+ + ++E + IE + V E L+ G + + +++
Sbjct: 61 KLLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKMHQVMSI 120
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGP 178
E+V++++D+T+EA YQ +I+ +L + EDE+ IL E + + + E+PEVP+E P
Sbjct: 121 EEVERILDETQEAVEYQRQIDELLAGNFTQEDEDAILEELNAITQEQ--MELPEVPSE-P 177
Query: 179 SEEQEKLDLPNVPTK 193
++ P P K
Sbjct: 178 LPDRN----PEAPAK 188
>RGD|1565325 [details] [associations]
symbol:Chmp6 "charged multivesicular body protein 6"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA;ISO] InterPro:IPR005024 Pfam:PF03357 RGD:1565325
GO:GO:0015031 EMBL:CH473948 CTD:79643 KO:K12195 OrthoDB:EOG4DBTG6
GeneTree:ENSGT00530000063571 IPI:IPI00364337 RefSeq:NP_001099326.1
UniGene:Rn.7707 Ensembl:ENSRNOT00000005379 GeneID:287873
KEGG:rno:287873 NextBio:627155 Uniprot:D3ZDR2
Length = 200
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 57/178 (32%), Positives = 94/178 (52%)
Query: 1 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
MGNLF +K ++T+ DRAIL LK QR KL QYQ+++ +E E+ AR L+
Sbjct: 1 MGNLFGRKKQSRVTEQDRAILQLKQQRDKLRQYQKRVTQQLERERALARQLLRDGRKERA 60
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
+ + ++E + IE + V E L+ G + + +++
Sbjct: 61 KLLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKMHQVMSI 120
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTE 176
E+V++++D+T+EA YQ +I+ +L + EDE+ IL E N Q + E+PEVP+E
Sbjct: 121 EEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEEL-NAITQEQI-ELPEVPSE 176
>WB|WBGene00022027 [details] [associations]
symbol:vps-20 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0032940
GO:GO:0015031 GO:GO:0010171 GO:GO:0040011 eggNOG:NOG291677
HOGENOM:HOG000208642 KO:K12195 GeneTree:ENSGT00530000063571
EMBL:FO081482 RefSeq:NP_490762.1 ProteinModelPortal:Q9BL60
SMR:Q9BL60 STRING:Q9BL60 PaxDb:Q9BL60 EnsemblMetazoa:Y65B4A.3
GeneID:171654 KEGG:cel:CELE_Y65B4A.3 UCSC:Y65B4A.3 CTD:171654
WormBase:Y65B4A.3 InParanoid:Q9BL60 OMA:WESETWI NextBio:872165
Uniprot:Q9BL60
Length = 208
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 61/205 (29%), Positives = 106/205 (51%)
Query: 1 MGNLFVKK---PK---ITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXX 54
MG +F KK PK ++D D AIL+LKTQR K+ Q ++ + +E E+Q A+ LI
Sbjct: 1 MGGIFSKKEKSPKSAPVSDQDNAILALKTQRDKMKQMIKRKENCLEKERQLAKQLIKDGR 60
Query: 55 XXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQS 114
L +EQ + D+E A Q+ V + L+ G A+K +
Sbjct: 61 KDRALLLLKKKRYQEKIIDQTLNHLSKIEQMVNDLEFAEVQQRVTDGLRQGNEALKKMNQ 120
Query: 115 EINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNL-EAQLAVQEMPEV 173
+++++ ++M++T+EA YQ+EI+ +L +LS D ++ E ++L A+ ++PE
Sbjct: 121 LFDIDEIDRIMEETKEAAEYQEEISNMLSGQLSNTDVSDVEKELEDLLAAEWGTVQLPEA 180
Query: 174 PT-EGPSEEQEKLDLPNVPTKVPVA 197
P+ E P E+E+ P + +A
Sbjct: 181 PSHELPEAERERQKEKEKPRREKIA 205
>UNIPROTKB|G4MKC0 [details] [associations]
symbol:MGG_02515 "Charged multivesicular body protein 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:CM001231 KO:K12195 RefSeq:XP_003709323.1
ProteinModelPortal:G4MKC0 EnsemblFungi:MGG_02515T0 GeneID:2681612
KEGG:mgr:MGG_02515 Uniprot:G4MKC0
Length = 202
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 66/208 (31%), Positives = 101/208 (48%)
Query: 1 MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXX 60
MGN K+T D+AIL LK QR KL +YQ+++ ++ + E + A+ ++
Sbjct: 1 MGN---SGSKVTAQDKAILDLKNQRDKLHRYQKKITILTDKETEIAKRMLEQGDKKRALL 57
Query: 61 XXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEIN-LE 119
D L +E+ +E A QK V L+ GT ++ I E+ +E
Sbjct: 58 ALRRKKYQESLLAKTDAQLDQLEKLANSVEFALIQKDVVFGLQQGTKVLEEIHKEMGGIE 117
Query: 120 DVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQL-AVQEMPEVPTEGP 178
V+KLM +T +A AYQ EI+ +LG +S +DE+E+ E LEA++ V +P P
Sbjct: 118 HVEKLMGETADAIAYQKEISEMLGNSMSNQDEDEVEDELAALEAEVNGVSALPNAP---- 173
Query: 179 SEEQEKLDLPNVPTKVPVASRVVADDAE 206
+ +LP V V S V DAE
Sbjct: 174 -----QTNLPKVKDPVAAESTAVKPDAE 196
>CGD|CAL0002935 [details] [associations]
symbol:VPS20 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0036178 "filamentous growth
of a population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0071285
"cellular response to lithium ion" evidence=IMP] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
[GO:0036177 "filamentous growth of a population of unicellular
organisms in response to pH" evidence=IMP] [GO:0070676
"intralumenal vesicle formation" evidence=IEA] [GO:0043328 "protein
targeting to vacuole involved in ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0002935
GO:GO:0036178 GO:GO:0015031 GO:GO:0071285 GO:GO:0071467
eggNOG:NOG291677 KO:K12195 EMBL:AACQ01000019 EMBL:AACQ01000018
RefSeq:XP_721018.1 RefSeq:XP_721139.1 ProteinModelPortal:Q5AH99
STRING:Q5AH99 GeneID:3637272 GeneID:3637427 KEGG:cal:CaO19.8516
KEGG:cal:CaO19.897 Uniprot:Q5AH99
Length = 216
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 63/217 (29%), Positives = 108/217 (49%)
Query: 9 PKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXX 68
PKIT DRAI LK QR KL QYQ++L+ +IE + + A+ +
Sbjct: 8 PKITAQDRAIFQLKQQRDKLKQYQKRLNTIIEKQTELAKKAVLNKQPEKAKFYLRSKKQQ 67
Query: 69 XXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDT 128
L N+E+ + IE +K V L+ G ++ + +E+ +E + L+D
Sbjct: 68 ESVISTTFDQLNNLEKLIGTIEFKLIEKDVVYGLQQGNKVLQKLNNEMQVEKIDALIDQL 127
Query: 129 EEAKAYQDEINAILG--EKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLD 186
E+ K DE++ +LG ++L+ +E+E+ EF L+ ++ ++ +V TE EE+E+ +
Sbjct: 128 EDEKLKVDEVSELLGGVDQLNRSEEDEVDKEFQTLQEEIH-GKIKQV-TE---EEEEESN 182
Query: 187 LPNVPTKVPVASRVVADDAEIAPAEASTKRRVMEEPL 223
LP VP P+ A EI E + ++ EP+
Sbjct: 183 LPKVPNTKPMPE---APSNEIE--EHTPQKETKHEPI 214
>UNIPROTKB|Q5AH99 [details] [associations]
symbol:CaO19.8516 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0036178
"filamentous growth of a population of unicellular organisms in
response to neutral pH" evidence=IMP] [GO:0071285 "cellular
response to lithium ion" evidence=IMP] [GO:0071467 "cellular
response to pH" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
CGD:CAL0002935 GO:GO:0036178 GO:GO:0015031 GO:GO:0071285
GO:GO:0071467 eggNOG:NOG291677 KO:K12195 EMBL:AACQ01000019
EMBL:AACQ01000018 RefSeq:XP_721018.1 RefSeq:XP_721139.1
ProteinModelPortal:Q5AH99 STRING:Q5AH99 GeneID:3637272
GeneID:3637427 KEGG:cal:CaO19.8516 KEGG:cal:CaO19.897
Uniprot:Q5AH99
Length = 216
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 63/217 (29%), Positives = 108/217 (49%)
Query: 9 PKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXX 68
PKIT DRAI LK QR KL QYQ++L+ +IE + + A+ +
Sbjct: 8 PKITAQDRAIFQLKQQRDKLKQYQKRLNTIIEKQTELAKKAVLNKQPEKAKFYLRSKKQQ 67
Query: 69 XXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDT 128
L N+E+ + IE +K V L+ G ++ + +E+ +E + L+D
Sbjct: 68 ESVISTTFDQLNNLEKLIGTIEFKLIEKDVVYGLQQGNKVLQKLNNEMQVEKIDALIDQL 127
Query: 129 EEAKAYQDEINAILG--EKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLD 186
E+ K DE++ +LG ++L+ +E+E+ EF L+ ++ ++ +V TE EE+E+ +
Sbjct: 128 EDEKLKVDEVSELLGGVDQLNRSEEDEVDKEFQTLQEEIH-GKIKQV-TE---EEEEESN 182
Query: 187 LPNVPTKVPVASRVVADDAEIAPAEASTKRRVMEEPL 223
LP VP P+ A EI E + ++ EP+
Sbjct: 183 LPKVPNTKPMPE---APSNEIE--EHTPQKETKHEPI 214
>UNIPROTKB|F1PRE3 [details] [associations]
symbol:CHMP6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00530000063571 OMA:IVEDMPE EMBL:AAEX03006193
Ensembl:ENSCAFT00000009186 Uniprot:F1PRE3
Length = 180
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 50/179 (27%), Positives = 93/179 (51%)
Query: 21 LKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLI 80
LK QR KL QYQ+++ +E E++ AR L+ + +
Sbjct: 2 LKQQRDKLKQYQKRITQQLEREREIARQLLRDGKKDRAKLLLKKKRYREQLLDKTENQIS 61
Query: 81 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 140
++E + IE + V E L+ G +K + +++E+V++++++T+EA YQ +I+
Sbjct: 62 SLETMVQSIEFTQIEMKVVEGLQIGNECLKKMHQVMSIEEVERILEETQEAVEYQRQIDE 121
Query: 141 ILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEG-PSEEQEKLDLPNVPTKVPVAS 198
+L + EDE+ IL E N Q ++ +PEVP+E P++E EK+ + P +V + +
Sbjct: 122 LLAGSFTQEDEDAILEEL-NAITQEQIK-LPEVPSEPLPTKEPEKVPIKARPKQVDLVA 178
>UNIPROTKB|F1RZY6 [details] [associations]
symbol:CHMP6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 OMA:DAITQEQ GeneTree:ENSGT00530000063571
EMBL:CU993801 Ensembl:ENSSSCT00000018659 Uniprot:F1RZY6
Length = 180
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 52/181 (28%), Positives = 90/181 (49%)
Query: 21 LKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLI 80
LK QR KL QYQ+++ +E E++ AR L+ + +
Sbjct: 2 LKQQRDKLRQYQKRITQQLEREREIARQLLRDGRKERAKLLLKKKRYREQLLDKTENQIT 61
Query: 81 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 140
++E + IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+
Sbjct: 62 SLETMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDE 121
Query: 141 ILGEKLSAEDEEEILAEFDNL-EAQLAVQEMPEVPTEG-PSEEQEKLDLPNVPTKV-PVA 197
+L + EDE IL E D + + Q+A +PEVP+E P EK+ P + PVA
Sbjct: 122 LLAGSFTQEDEAAILEELDAITQEQVA---LPEVPSEPLPETIPEKVPGKARPRRAEPVA 178
Query: 198 S 198
+
Sbjct: 179 A 179
>UNIPROTKB|I3L4A1 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HGNC:HGNC:25675 EMBL:AC127496 Ensembl:ENST00000572778 Bgee:I3L4A1
Uniprot:I3L4A1
Length = 224
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 45/162 (27%), Positives = 80/162 (49%)
Query: 21 LKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLI 80
LK QR KL QYQ+++ +E E+ AR L+ + +
Sbjct: 2 LKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQIS 61
Query: 81 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 140
++E + IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+
Sbjct: 62 SLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDE 121
Query: 141 ILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQ 182
+L + EDE+ IL E + + E+PEVP+E P E+
Sbjct: 122 LLAGSFTQEDEDAILEELSAITQEQI--ELPEVPSE-PLPEK 160
>SGD|S000004682 [details] [associations]
symbol:VPS20 "Myristoylated subunit of ESCRTIII" species:4932
"Saccharomyces cerevisiae" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045324 "late endosome to vacuole transport" evidence=IMP;IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0000815 "ESCRT III
complex" evidence=IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0043162 "ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IC]
InterPro:IPR005024 Pfam:PF03357 SGD:S000004682 GO:GO:0005774
GO:GO:0015031 EMBL:BK006946 EMBL:Z49259 GO:GO:0045324 GO:GO:0000815
eggNOG:NOG291677 HOGENOM:HOG000208642 KO:K12195 OMA:DAITQEQ
GeneTree:ENSGT00530000063571 GO:GO:0043162 GO:GO:0070676
OrthoDB:EOG46DQCG PIR:S54452 RefSeq:NP_013794.1
ProteinModelPortal:Q04272 DIP:DIP-1961N IntAct:Q04272
MINT:MINT-390066 STRING:Q04272 PaxDb:Q04272 EnsemblFungi:YMR077C
GeneID:855101 KEGG:sce:YMR077C NextBio:978422 Genevestigator:Q04272
GermOnline:YMR077C Uniprot:Q04272
Length = 221
Score = 141 (54.7 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 37/116 (31%), Positives = 62/116 (53%)
Query: 79 LINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEI 138
LIN+E ++ +E +K LK+G +K + E + +V +LMDD ++ AYQ+EI
Sbjct: 83 LINLENMVSTLEFKMVEKQFINGLKNGNEILKKLNKEFS--NVDELMDDVQDQIAYQNEI 140
Query: 139 NAILGEKL--SAEDEEEILAEFDNLEAQLAVQEMPEVPTEG-PSEEQEKLDLPNVP 191
N L L ++ E+++ E D LE++L ++M PS E LP++P
Sbjct: 141 NETLSRSLVGTSNYEDDLDKELDALESELNPEKMNNAKVANMPSTE----GLPSLP 192
Score = 72 (30.4 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 8 KPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLI 50
K IT DRAIL +K + ++ ++ ++ D +I EK +DLI
Sbjct: 7 KVHITKTDRAILEVKRSKDEIHKFTRRTDNLILVEKSQLKDLI 49
>SGD|S000004015 [details] [associations]
symbol:SNF7 "Subunit of the ESCRT-III complex" species:4932
"Saccharomyces cerevisiae" [GO:0045324 "late endosome to vacuole
transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IC] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0071454 "cellular response
to anoxia" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000004015 GO:GO:0015031
EMBL:BK006945 GO:GO:0045324 GO:GO:0000815 eggNOG:NOG291419
GeneTree:ENSGT00390000005006 KO:K12194 HOGENOM:HOG000209960
GO:GO:0071454 GO:GO:0043162 GO:GO:0070676 OrthoDB:EOG4TMVBN
EMBL:L09751 EMBL:Z73197 EMBL:AY558202 PIR:S52590 RefSeq:NP_013125.1
ProteinModelPortal:P39929 SMR:P39929 DIP:DIP-1747N IntAct:P39929
MINT:MINT-389266 STRING:P39929 PaxDb:P39929 PeptideAtlas:P39929
EnsemblFungi:YLR025W GeneID:850712 KEGG:sce:YLR025W CYGD:YLR025w
OMA:DSLMQDI NextBio:966772 Genevestigator:P39929 GermOnline:YLR025W
Uniprot:P39929
Length = 240
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 51/213 (23%), Positives = 92/213 (43%)
Query: 16 RAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXV 75
+AI+ L+ L++ Q L I ++ AR + V
Sbjct: 21 KAIVRLREHINLLSKKQSHLRTQITNQENEARIFLTKGNKVMAKNALKKKKTIEQLLSKV 80
Query: 76 DGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQ 135
+G + ++EQQL IE A+ +++ G A+K I S ++++ V + MD+ E
Sbjct: 81 EGTMESMEQQLFSIESANLNLETMRAMQEGAKAMKTIHSGLDIDKVDETMDEIREQVELG 140
Query: 136 DEINAILGEKL----SAEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSE---EQEKLDLP 188
DEI+ + L + DE+E+ E D L + A QE ++ + + K+ LP
Sbjct: 141 DEISDAISRPLITGANEVDEDELDEELDMLAQENANQETSKIVNNNVNAAPISENKVSLP 200
Query: 189 NVPT-KVPVASRVVADDAEIAPAEASTKRRVME 220
+VP+ K+ + V D E E ++ + E
Sbjct: 201 SVPSNKIKQSENSVKDGEEEEDEEDEDEKALRE 233
>CGD|CAL0005125 [details] [associations]
symbol:SNF7 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0016485 "protein processing"
evidence=IGI;IMP] [GO:0006623 "protein targeting to vacuole"
evidence=ISS;IMP] [GO:0000815 "ESCRT III complex" evidence=ISS;IDA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0036178 "filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0007165 "signal transduction" evidence=IGI]
[GO:0045324 "late endosome to vacuole transport" evidence=IMP]
[GO:0036177 "filamentous growth of a population of unicellular
organisms in response to pH" evidence=IMP] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IGI;IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0070676 "intralumenal vesicle formation" evidence=IEA]
[GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0071454
"cellular response to anoxia" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 CGD:CAL0005125 GO:GO:0007165 GO:GO:0036178
GO:GO:0009405 GO:GO:0035690 GO:GO:0031505 EMBL:AACQ01000036
EMBL:AACQ01000035 GO:GO:0016485 GO:GO:0006623 GO:GO:0045324
GO:GO:0000815 GO:GO:0071285 GO:GO:0071467 eggNOG:NOG291419
KO:K12194 RefSeq:XP_718900.1 RefSeq:XP_719002.1
ProteinModelPortal:Q5ABD0 STRING:Q5ABD0 GeneID:3639377
GeneID:3639478 KEGG:cal:CaO19.13461 KEGG:cal:CaO19.6040
Uniprot:Q5ABD0
Length = 226
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 50/198 (25%), Positives = 84/198 (42%)
Query: 16 RAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXV 75
+AI+ L+ + L + + L ++ + Q AR + V
Sbjct: 19 KAIVELREHIQTLNKKKNHLQQQMDDQDQLARKYVSSKQTTLAKSALKRKKGYESNLLKV 78
Query: 76 DGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQ 135
+ + +E QL IE A+ +++K G A+K I E +++ V+ MD+ E
Sbjct: 79 ENQIETLETQLISIEGANLNLETMKAMKQGAKAMKQIHGEYDVDKVEDTMDEIREQVELA 138
Query: 136 DEINAILGEKLSAE--DEEEILAEFDNLEAQLAVQEMPE-VPTEG--P---SEEQEKLDL 187
DEI+ + + E DE+E+ E LEA+ QE VP + P S E+E
Sbjct: 139 DEISEAISRPVGNEFVDEDELDEELKELEAEAKEQEQEHRVPAQKAKPQPVSREEELPQF 198
Query: 188 PNVPTKVPVASRVVADDA 205
P+V K PV ++A
Sbjct: 199 PSVNKKAPVVEEDEDEEA 216
>UNIPROTKB|Q5ABD0 [details] [associations]
symbol:SNF7 "Vacuolar-sorting protein SNF7" species:237561
"Candida albicans SC5314" [GO:0000815 "ESCRT III complex"
evidence=ISS;IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006623 "protein targeting to vacuole" evidence=ISS;IMP]
[GO:0007165 "signal transduction" evidence=IGI] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016485 "protein processing"
evidence=IGI;IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0031505 "fungal-type cell wall organization" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036177
"filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] [GO:0036178 "filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0045324 "late endosome to
vacuole transport" evidence=IMP] [GO:0071285 "cellular response to
lithium ion" evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IGI;IMP] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0005125
GO:GO:0007165 GO:GO:0036178 GO:GO:0009405 GO:GO:0035690
GO:GO:0031505 EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0016485
GO:GO:0006623 GO:GO:0045324 GO:GO:0000815 GO:GO:0071285
GO:GO:0071467 eggNOG:NOG291419 KO:K12194 RefSeq:XP_718900.1
RefSeq:XP_719002.1 ProteinModelPortal:Q5ABD0 STRING:Q5ABD0
GeneID:3639377 GeneID:3639478 KEGG:cal:CaO19.13461
KEGG:cal:CaO19.6040 Uniprot:Q5ABD0
Length = 226
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 50/198 (25%), Positives = 84/198 (42%)
Query: 16 RAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXV 75
+AI+ L+ + L + + L ++ + Q AR + V
Sbjct: 19 KAIVELREHIQTLNKKKNHLQQQMDDQDQLARKYVSSKQTTLAKSALKRKKGYESNLLKV 78
Query: 76 DGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQ 135
+ + +E QL IE A+ +++K G A+K I E +++ V+ MD+ E
Sbjct: 79 ENQIETLETQLISIEGANLNLETMKAMKQGAKAMKQIHGEYDVDKVEDTMDEIREQVELA 138
Query: 136 DEINAILGEKLSAE--DEEEILAEFDNLEAQLAVQEMPE-VPTEG--P---SEEQEKLDL 187
DEI+ + + E DE+E+ E LEA+ QE VP + P S E+E
Sbjct: 139 DEISEAISRPVGNEFVDEDELDEELKELEAEAKEQEQEHRVPAQKAKPQPVSREEELPQF 198
Query: 188 PNVPTKVPVASRVVADDA 205
P+V K PV ++A
Sbjct: 199 PSVNKKAPVVEEDEDEEA 216
>UNIPROTKB|Q9BY43 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005829
"cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0016197 "endosomal transport"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0008289 GO:GO:0030659 GO:GO:0016044 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS CTD:29082 KO:K12194
EMBL:AB100262 EMBL:AY329084 EMBL:AF212243 EMBL:AF161483
EMBL:BX161512 EMBL:AL096870 EMBL:AL136295 EMBL:BC010893
EMBL:BC107699 IPI:IPI00794397 RefSeq:NP_054888.2 UniGene:Hs.279761
PDB:3C3O PDBsum:3C3O ProteinModelPortal:Q9BY43 SMR:Q9BY43
DIP:DIP-39082N IntAct:Q9BY43 MINT:MINT-3063754 STRING:Q9BY43
PhosphoSite:Q9BY43 DMDM:90152096 PaxDb:Q9BY43 PRIDE:Q9BY43
DNASU:29082 GeneID:29082 KEGG:hsa:29082 GeneCards:GC14M024678
HGNC:HGNC:20274 MIM:610051 neXtProt:NX_Q9BY43 PharmGKB:PA134888743
InParanoid:Q9BY43 ChiTaRS:CHMP4A EvolutionaryTrace:Q9BY43
GenomeRNAi:29082 NextBio:52058 ArrayExpress:Q9BY43 Bgee:Q9BY43
CleanEx:HS_CHMP4A Genevestigator:Q9BY43 GermOnline:ENSG00000100931
Uniprot:Q9BY43
Length = 222
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 55/214 (25%), Positives = 91/214 (42%)
Query: 1 MGNLFVK--KPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
+G LF K K K + AI LK + L + Q+ L+ I+ E Q A+
Sbjct: 4 LGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKY-GTKNKRAA 62
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
DG L +E Q IE A+ V +++ ++K ++++
Sbjct: 63 LQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDI 122
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEMPEVPT 175
+ V +LM D E + +I+ + + D E+E+L E + LE + QE+ V
Sbjct: 123 DKVDELMTDITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEELEQEELAQELLNV-- 180
Query: 176 EGPSEEQEKLDLPNVP-TKVPVASRVVADDAEIA 208
G EE+ + LP+VP T +P D+ E A
Sbjct: 181 -GDKEEEPSVKLPSVPSTHLPAGPAPKVDEDEEA 213
>UNIPROTKB|Q14D22 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HOVERGEN:HBG050928 CTD:29082 HOGENOM:HOG000209959 KO:K12194
OMA:GKAGPCV EMBL:AL096870 EMBL:AL136295 IPI:IPI00794397
RefSeq:NP_054888.2 UniGene:Hs.279761 DNASU:29082 GeneID:29082
KEGG:hsa:29082 HGNC:HGNC:20274 PharmGKB:PA134888743 ChiTaRS:CHMP4A
GenomeRNAi:29082 NextBio:52058 EMBL:BC113533 EMBL:BC113535
SMR:Q14D22 STRING:Q14D22 Ensembl:ENST00000347519 UCSC:uc001wni.3
H-InvDB:HIX0131228 Uniprot:Q14D22
Length = 265
Score = 154 (59.3 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 55/214 (25%), Positives = 91/214 (42%)
Query: 1 MGNLFVK--KPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
+G LF K K K + AI LK + L + Q+ L+ I+ E Q A+
Sbjct: 47 LGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKY-GTKNKRAA 105
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
DG L +E Q IE A+ V +++ ++K ++++
Sbjct: 106 LQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDI 165
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEMPEVPT 175
+ V +LM D E + +I+ + + D E+E+L E + LE + QE+ V
Sbjct: 166 DKVDELMTDITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEELEQEELAQELLNV-- 223
Query: 176 EGPSEEQEKLDLPNVP-TKVPVASRVVADDAEIA 208
G EE+ + LP+VP T +P D+ E A
Sbjct: 224 -GDKEEEPSVKLPSVPSTHLPAGPAPKVDEDEEA 256
>UNIPROTKB|I3L3E4 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HGNC:HGNC:25675 EMBL:AC127496 Ensembl:ENST00000572525 Bgee:I3L3E4
Uniprot:I3L3E4
Length = 113
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 38/116 (32%), Positives = 65/116 (56%)
Query: 89 IELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSA 148
IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L +
Sbjct: 5 IEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQ 64
Query: 149 EDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLP-NVPTKV-PVASRVVA 202
EDE+ IL E + + E+PEVP+E P E+ +P NVP K P + +VA
Sbjct: 65 EDEDAILEELSAITQEQI--ELPEVPSE-PLPEK----IPENVPVKARPRQAELVA 113
>UNIPROTKB|A2VDY3 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0031902 GO:GO:0015031 GO:GO:0008289
GO:GO:0030659 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
EMBL:BC133471 IPI:IPI00702618 RefSeq:NP_001121976.1
UniGene:Bt.21492 ProteinModelPortal:A2VDY3 STRING:A2VDY3
PRIDE:A2VDY3 Ensembl:ENSBTAT00000008352 GeneID:613647
KEGG:bta:613647 CTD:29082 GeneTree:ENSGT00390000005006
HOGENOM:HOG000209959 InParanoid:A2VDY3 KO:K12194 OMA:GKAGPCV
NextBio:20898686 Uniprot:A2VDY3
Length = 222
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 56/215 (26%), Positives = 93/215 (43%)
Query: 1 MGNLFV--KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
+G LF KK K + AI LK + L + Q+ L+ IE E QAA+
Sbjct: 4 LGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIEQELQAAKKH-GTKNKRAA 62
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
DG L +E Q IE A+ V +++ +K ++++
Sbjct: 63 LQALRRKKRLEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQGLKKAYQDMDI 122
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEMPEVPT 175
+ V +LM D E + +I+ + + D E+E+L E + LE + +E+ V
Sbjct: 123 DKVDELMADITEQQEVAQQISDAISRPVGFGDDVDEDELLEELEELEQEELARELLHV-- 180
Query: 176 EGPSEEQEKLDLPNVP-TKVPV--ASRVVADDAEI 207
G EE+ + LP+ P T +P A + D+AE+
Sbjct: 181 -GDEEEEPPVALPSAPSTHLPAEPAPKADEDEAEL 214
>TAIR|locus:2119956 [details] [associations]
symbol:SNF7.1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078470
EMBL:AL161574 GO:GO:0015031 GO:GO:0000815 eggNOG:NOG291419
KO:K12194 HOGENOM:HOG000209960 EMBL:AY042853 EMBL:AY072490
EMBL:AY088519 IPI:IPI00528225 IPI:IPI00548294 PIR:T08971
RefSeq:NP_001078468.1 RefSeq:NP_194645.1 RefSeq:NP_974635.1
UniGene:At.3412 ProteinModelPortal:Q9SZE4 SMR:Q9SZE4 IntAct:Q9SZE4
STRING:Q9SZE4 PaxDb:Q9SZE4 PRIDE:Q9SZE4 EnsemblPlants:AT4G29160.1
EnsemblPlants:AT4G29160.3 GeneID:829037 KEGG:ath:AT4G29160
TAIR:At4g29160 InParanoid:Q9SZE4 OMA:DEINENM PhylomeDB:Q9SZE4
ProtClustDB:CLSN2685332 Genevestigator:Q9SZE4 Uniprot:Q9SZE4
Length = 219
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 37/136 (27%), Positives = 66/136 (48%)
Query: 80 INVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEIN 139
+ + Q+ +E A ++L+SG +A+KA+Q N++DV K MD+ E +I
Sbjct: 81 LRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQ 140
Query: 140 AILGEKLSAE---DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPTKVPV 196
L + A DE+E+ AE D LE++ ++ + T P + P + PV
Sbjct: 141 EALATPMGAAADFDEDELAAELDELESEELESQLLQPATTAPPLPSVPVPAGRQPAR-PV 199
Query: 197 ASRVVADDAEIAPAEA 212
+ A++ E+A +A
Sbjct: 200 PQKRTAEEEELAALQA 215
>UNIPROTKB|I3L4G8 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HGNC:HGNC:25675 EMBL:AC127496 Ensembl:ENST00000571457 Bgee:I3L4G8
Uniprot:I3L4G8
Length = 173
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/115 (29%), Positives = 63/115 (54%)
Query: 81 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 140
++E + IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+
Sbjct: 41 SLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDE 100
Query: 141 ILGEKLSAEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPTKVP 195
+L + EDE+ IL E + + E+PEVP+E P E+ +P +P P
Sbjct: 101 LLAGSFTQEDEDAILEELSAITQEQI--ELPEVPSE-PLPEK----IPALPQDGP 148
>TAIR|locus:2051970 [details] [associations]
symbol:SNF7.2 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
EMBL:AC005169 GO:GO:0000815 eggNOG:NOG291419 KO:K12194 OMA:MKELEAW
HOGENOM:HOG000209960 EMBL:AY045911 EMBL:AY079421 IPI:IPI00526112
PIR:F84581 RefSeq:NP_179573.1 UniGene:At.20997
ProteinModelPortal:O82197 SMR:O82197 IntAct:O82197 STRING:O82197
PaxDb:O82197 PRIDE:O82197 EnsemblPlants:AT2G19830.1 GeneID:816502
KEGG:ath:AT2G19830 TAIR:At2g19830 InParanoid:O82197
PhylomeDB:O82197 Genevestigator:O82197 Uniprot:O82197
Length = 213
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 80 INVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEIN 139
+ + Q+ +E A ++L++G +A+KA+Q N++DV K MD+ E +I
Sbjct: 82 LRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQ 141
Query: 140 AILGEKLSAED--EEEILAEFDNLE-AQLAVQEMPEVPTEGPSEEQEKLDLPNVPTKVPV 196
L A D E+E+ AE D LE A+L Q + VP P N P + P
Sbjct: 142 EALSAPFGANDFDEDELEAELDELEGAELEEQLLQPVPIHVPQG--------NKPARAPA 193
Query: 197 ASRVVADDAEIAPAEA 212
+ A++ E+A +A
Sbjct: 194 QKQPTAEEDELAALQA 209
>UNIPROTKB|E9PQ80 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AL096870 EMBL:AL136295 HGNC:HGNC:20274 ChiTaRS:CHMP4A
IPI:IPI00975824 ProteinModelPortal:E9PQ80 Ensembl:ENST00000533011
ArrayExpress:E9PQ80 Bgee:E9PQ80 Uniprot:E9PQ80
Length = 213
Score = 144 (55.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 49/193 (25%), Positives = 83/193 (43%)
Query: 7 KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXX 66
KK K + AI LK + L + Q+ L+ I+ E Q A+
Sbjct: 22 KKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKY-GTKNKRAALQALRRKK 80
Query: 67 XXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMD 126
DG L +E Q IE A+ V +++ ++K +++++ V +LM
Sbjct: 81 RFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMT 140
Query: 127 DTEEAKAYQDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQE 183
D E + +I+ + + D E+E+L E + LE + QE+ V G EE+
Sbjct: 141 DITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEELEQEELAQELLNV---GDKEEEP 197
Query: 184 KLDLPNVP-TKVP 195
+ LP+VP T +P
Sbjct: 198 SVKLPSVPSTHLP 210
>UNIPROTKB|Q5ZHP5 [details] [associations]
symbol:CHMP4B "Charged multivesicular body protein 4b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006
HOGENOM:HOG000209959 KO:K12194 EMBL:AJ721089 IPI:IPI00582041
RefSeq:NP_001006286.1 UniGene:Gga.1495 ProteinModelPortal:Q5ZHP5
IntAct:Q5ZHP5 STRING:Q5ZHP5 PRIDE:Q5ZHP5 Ensembl:ENSGALT00000003268
GeneID:419150 KEGG:gga:419150 CTD:128866 InParanoid:Q5ZHP5
OMA:MKELEAW NextBio:20822253 Uniprot:Q5ZHP5
Length = 227
Score = 145 (56.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/183 (26%), Positives = 83/183 (45%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AAR +D
Sbjct: 27 AIQRLRDTEEMLSKKQEFLEKKIEQELAAARKH-GTKNKRAALQALKRKKRYEKQLAQID 85
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D E + D
Sbjct: 86 GTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIDKVDELMQDIAEQQELAD 145
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT- 192
EI+ + + + E DE+E++AE + LE + + + E+ GP E + LPNVP+
Sbjct: 146 EISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEI--SGP----ETVPLPNVPSI 199
Query: 193 KVP 195
+P
Sbjct: 200 SIP 202
>UNIPROTKB|E9PSI1 [details] [associations]
symbol:TM9SF1 "Transmembrane 9 superfamily member 1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR004240 InterPro:IPR005024 Pfam:PF02990 Pfam:PF03357
GO:GO:0016021 GO:GO:0015031 EMBL:AL096870 PANTHER:PTHR10766
HGNC:HGNC:11864 ChiTaRS:TM9SF1 OMA:WYKSTVI IPI:IPI00983078
SMR:E9PSI1 Ensembl:ENST00000530611 Ensembl:ENST00000556387
UCSC:uc010tob.1 Uniprot:E9PSI1
Length = 815
Score = 148 (57.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 1 MGNLFVK--KPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
+G LF K K K + AI LK + L + Q+ L+ I+ E Q A+
Sbjct: 4 LGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKY-GTKNKRAA 62
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
DG L +E Q IE A+ V +++ ++K ++++
Sbjct: 63 LQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDI 122
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEMPEVPT 175
+ V +LM D E + +I+ + + D E+E+L E + LE + QE+ V
Sbjct: 123 DKVDELMTDITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEELEQEELAQELLNV-- 180
Query: 176 EGPSEEQEKLDLPNVP-TKVP 195
G EE+ + LP+VP T +P
Sbjct: 181 -GDKEEEPSVKLPSVPSTHLP 200
>UNIPROTKB|P59074 [details] [associations]
symbol:CGI-301 "Putative protein CGI-301" species:9606
"Homo sapiens" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 EMBL:AF531436
EMBL:AL834124 IPI:IPI00171424 ProteinModelPortal:P59074 SMR:P59074
STRING:P59074 DMDM:24638418 PaxDb:P59074 PRIDE:P59074
neXtProt:NX_P59074 eggNOG:NOG291419 HOVERGEN:HBG050928
InParanoid:P59074 OrthoDB:EOG49GKHS ArrayExpress:P59074
Genevestigator:P59074 GermOnline:ENSG00000101421 Uniprot:P59074
Length = 171
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 35/121 (28%), Positives = 63/121 (52%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L +E Q +E A+ V +++ S A KA ++++ V +LM D + +
Sbjct: 42 IDGTLSTIEFQQQALENANTNTEVLKNMGSAAKAKKAAHDNMDIDKVDELMQDIADQQEL 101
Query: 135 QDEINAILGEKLS---AEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVP 191
+EI+ + + + DE+E++AE + LE + + + EV GP E + LPNVP
Sbjct: 102 GEEISTAISKPVGFGEKSDEDELMAELEELEQEEPDKNLLEV--SGP----ETVPLPNVP 155
Query: 192 T 192
+
Sbjct: 156 S 156
>DICTYBASE|DDB_G0275573 [details] [associations]
symbol:vps32 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0045324 "late endosome to vacuole
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=IMP] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0007040 "lysosome organization" evidence=IMP]
[GO:0005768 "endosome" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0001919 "regulation of receptor recycling"
evidence=IMP] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 dictyBase:DDB_G0275573
GO:GO:0005634 GO:GO:0031902 GO:GO:0008565 GenomeReviews:CM000151_GR
GO:GO:0007040 EMBL:AAFI02000013 GO:GO:0001919 GO:GO:0030659
GO:GO:0008333 GO:GO:0045324 GO:GO:0000815 eggNOG:NOG291419
KO:K12194 OMA:MKELEAW RefSeq:XP_643404.1 ProteinModelPortal:Q86H98
STRING:Q86H98 PRIDE:Q86H98 EnsemblProtists:DDB0231531
GeneID:8619990 KEGG:ddi:DDB_G0275573 Uniprot:Q86H98
Length = 215
Score = 136 (52.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 53/218 (24%), Positives = 94/218 (43%)
Query: 4 LFVK-KPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXX 62
LF K KPK D I L+ L + Q L +E E++ A+ L+
Sbjct: 3 LFGKPKPK-QDTQETIGKLRLTLDMLEKRQTFLQDKLEKEQEKAKVLVSQKRKREALLCL 61
Query: 63 XXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQ 122
+ G + QQ+ +E A + S++ G +++ + + ++ V
Sbjct: 62 KKRNNFQNEVTKLQGSYDTLNQQIFALENAKMNMEIMNSMRDGARSLRELHGHLTIDKVD 121
Query: 123 KLMDDTEEAKAYQDEINAILGEKLS--AEDEEEIL---AEFDN--LEAQLAVQEMPEVPT 175
++++ +E +EI+ + + L EDEEE+L AE++ L+AQL + P
Sbjct: 122 DVIEEIQEQMEIHEEISNAISQPLGNQVEDEEELLRELAEYEQEELDAQLLNIKAPS--R 179
Query: 176 EGPSEEQEKLDLPNVPTKVPVASRVVADDAEIAPAEAS 213
E P E Q ++ P + VP S+ ++ EI E S
Sbjct: 180 ELPQEIQ--VNFPTISKTVPKLSK---EEEEIRALEES 212
>UNIPROTKB|E2RDX2 [details] [associations]
symbol:CHMP4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 CTD:128866 OMA:MKELEAW
EMBL:AAEX03013900 RefSeq:XP_542966.1 ProteinModelPortal:E2RDX2
Ensembl:ENSCAFT00000011977 GeneID:485842 KEGG:cfa:485842
NextBio:20859747 Uniprot:E2RDX2
Length = 224
Score = 136 (52.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 45/179 (25%), Positives = 81/179 (45%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AA+ +D
Sbjct: 25 AIQRLRDTEEMLSKKQEFLETKIEQELTAAKKH-GTKNKRAALQALKRKKRYEKQLAQID 83
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D + + +
Sbjct: 84 GTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAE 143
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
EI+ + + + E DE+E++AE + LE + + + E+ GP E + LPNVP+
Sbjct: 144 EISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEI--SGP----ETVPLPNVPS 196
>FB|FBgn0086656 [details] [associations]
symbol:shrb "shrub" species:7227 "Drosophila melanogaster"
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0044130 "negative regulation
of growth of symbiont in host" evidence=IMP] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] InterPro:IPR005024
Pfam:PF03357 EMBL:AE013599 GO:GO:0015031 GO:GO:0048813
GO:GO:0044130 eggNOG:NOG291419 GeneTree:ENSGT00390000005006
KO:K12194 OMA:MKELEAW EMBL:AY069131 RefSeq:NP_610462.3
UniGene:Dm.2267 SMR:Q8T0Q4 IntAct:Q8T0Q4 MINT:MINT-896346
STRING:Q8T0Q4 EnsemblMetazoa:FBtr0088623 GeneID:35933
KEGG:dme:Dmel_CG8055 UCSC:CG8055-RA CTD:35933 FlyBase:FBgn0086656
InParanoid:Q8T0Q4 OrthoDB:EOG4SBCFD ChiTaRS:shrb GenomeRNAi:35933
NextBio:795919 Uniprot:Q8T0Q4
Length = 226
Score = 136 (52.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 51/210 (24%), Positives = 87/210 (41%)
Query: 2 GNLFVKKPKITDVD-RAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXX 60
G +F K ++ AI L+ L + Q+ L+ IE E AR
Sbjct: 5 GKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKN-ASKNKRVALQ 63
Query: 61 XXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLED 120
+DG L +E Q +E A+ AV ++K+ +A+K ++++
Sbjct: 64 ALKKKKRLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDK 123
Query: 121 VQKLMDDTEEAKAYQDEINAILGEKLS--AE-DEEEILAEFDNLEAQLAVQEMPEVPTEG 177
V +MDD E + EI+ + ++ A+ D+E++ E D LE + +E+ +P
Sbjct: 124 VHDMMDDIAEQQDVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEIIGIPEPT 183
Query: 178 PS-EEQEKLDLPNVPT--KVPVASRVVADD 204
P+ E DLP K + V DD
Sbjct: 184 PTLPEAPTEDLPEKAKEKKKATTTTAVEDD 213
>WB|WBGene00020025 [details] [associations]
symbol:R12C12.5 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:NOG291419
GeneTree:ENSGT00390000005006 KO:K12194 HOGENOM:HOG000209960
EMBL:FO081545 PIR:T16731 RefSeq:NP_495206.2
ProteinModelPortal:Q21959 SMR:Q21959 STRING:Q21959 PaxDb:Q21959
EnsemblMetazoa:R12C12.5 GeneID:174010 KEGG:cel:CELE_R12C12.5
UCSC:R12C12.5 CTD:174010 WormBase:R12C12.5 InParanoid:Q21959
OMA:INDNMEN NextBio:882111 Uniprot:Q21959
Length = 236
Score = 136 (52.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 7 KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXX 66
+K K D AI +L+ L + Q+ ++ IE E ++A+ +
Sbjct: 29 RKRKAPTADEAIGNLRDAEELLIKKQEYFELRIEQEVESAKKYMKTNKKMALAALRKKKH 88
Query: 67 XXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMD 126
+DG L +E Q +E V + L T +K ++++++ V LMD
Sbjct: 89 YEQELSR-IDGVLTKLEAQRTALENVGMHNEVIDVLGKTTETLKKEHAKMDIDKVHDLMD 147
Query: 127 DTEEAKAYQDEINAILGEKLS-AEDEEEILAEFDNLEAQLA----VQEMPEVPT---EGP 178
+ + A +E+N + + DE+E++ E L+ +A ++P+VP E P
Sbjct: 148 EIADGLAMSEELNEAISAPIGDVADEDELMQELQELQDNVADLSTTTKLPDVPATLPEAP 207
Query: 179 SEE 181
S E
Sbjct: 208 SGE 210
>POMBASE|SPAC1142.07c [details] [associations]
symbol:vps32 "ESCRT III complex subunit Vps32"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900
"membrane budding" evidence=IC] [GO:0043328 "protein targeting to
vacuole involved in ubiquitin-dependent protein catabolic process
via the multivesicular body sorting pathway" evidence=IMP]
[GO:0045324 "late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC1142.07c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000815 GO:GO:0043328
eggNOG:NOG291419 KO:K12194 OMA:MKELEAW HOGENOM:HOG000209960
GO:GO:0006900 OrthoDB:EOG4TMVBN RefSeq:NP_594271.1
ProteinModelPortal:Q9P7F7 MINT:MINT-468312 STRING:Q9P7F7
EnsemblFungi:SPAC1142.07c.1 GeneID:2542922 KEGG:spo:SPAC1142.07c
NextBio:20803958 Uniprot:Q9P7F7
Length = 222
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/125 (28%), Positives = 68/125 (54%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
++G N+EQQL I+ A+ ++++ G A+K+IQ ++ + V ++MD + +
Sbjct: 77 IEGSRNNIEQQLFSIQNANLNFETLQAMRQGAEAMKSIQRGMDADKVDQIMDKIRDQQTI 136
Query: 135 QDEINAILGEK--LSAE-DEEEILAEFDNLE-----AQLAVQEMPEVPTEG-PSEEQEKL 185
+EI+ ++ L+AE DE+E+ E D L+ +++ E P V T P+ +
Sbjct: 137 SEEISTMISTPVGLNAEIDEDELANELDELQQMELDSKMLGAEKPPVHTPAVPAVPSQVK 196
Query: 186 DLPNV 190
DLP++
Sbjct: 197 DLPSI 201
>UNIPROTKB|Q9H444 [details] [associations]
symbol:CHMP4B "Charged multivesicular body protein 4b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
EMBL:CH471077 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0016044 PDB:3UM3 PDBsum:3UM3 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS GermOnline:ENSG00000101421 KO:K12194 CTD:128866
OMA:MKELEAW HOGENOM:HOG000209960 EMBL:AB100261 EMBL:AY329085
EMBL:AL050349 EMBL:BC033859 IPI:IPI00025974 RefSeq:NP_789782.1
UniGene:Hs.472471 PDB:3C3Q PDB:4ABM PDBsum:3C3Q PDBsum:4ABM
ProteinModelPortal:Q9H444 SMR:Q9H444 DIP:DIP-29924N IntAct:Q9H444
MINT:MINT-5000054 STRING:Q9H444 PhosphoSite:Q9H444 DMDM:24636296
PeptideAtlas:Q9H444 PRIDE:Q9H444 Ensembl:ENST00000217402
GeneID:128866 KEGG:hsa:128866 UCSC:uc002xaa.3 GeneCards:GC20P032399
HGNC:HGNC:16171 HPA:HPA041401 MIM:605387 MIM:610897
neXtProt:NX_Q9H444 Orphanet:98993 PharmGKB:PA25721
InParanoid:Q9H444 PhylomeDB:Q9H444 ChiTaRS:CHMP4B
EvolutionaryTrace:Q9H444 GenomeRNAi:128866 NextBio:82502
ArrayExpress:Q9H444 Bgee:Q9H444 CleanEx:HS_CHMP4B
Genevestigator:Q9H444 Uniprot:Q9H444
Length = 224
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/179 (25%), Positives = 81/179 (45%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AA+ +D
Sbjct: 25 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKH-GTKNKRAALQALKRKKRYEKQLAQID 83
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D + + +
Sbjct: 84 GTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAE 143
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
EI+ + + + E DE+E++AE + LE + + + E+ GP E + LPNVP+
Sbjct: 144 EISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEI--SGP----ETVPLPNVPS 196
>MGI|MGI:1922858 [details] [associations]
symbol:Chmp4b "charged multivesicular body protein 4B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:1922858 GO:GO:0005829 GO:GO:0031902
GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 KO:K12194 CTD:128866 OMA:MKELEAW
HOGENOM:HOG000209960 ChiTaRS:CHMP4B EMBL:AK008205 EMBL:AK156473
EMBL:AK159193 EMBL:AL929557 EMBL:BC006905 EMBL:BC011429
EMBL:BC059279 IPI:IPI00171974 RefSeq:NP_083638.1 UniGene:Mm.262480
ProteinModelPortal:Q9D8B3 SMR:Q9D8B3 STRING:Q9D8B3
PhosphoSite:Q9D8B3 PaxDb:Q9D8B3 PRIDE:Q9D8B3
Ensembl:ENSMUST00000044277 GeneID:75608 KEGG:mmu:75608
UCSC:uc008njp.1 InParanoid:A2AVM1 NextBio:343498 Bgee:Q9D8B3
CleanEx:MM_CHMP4B Genevestigator:Q9D8B3
GermOnline:ENSMUSG00000038467 Uniprot:Q9D8B3
Length = 224
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/179 (25%), Positives = 81/179 (45%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AA+ +D
Sbjct: 25 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKH-GTKNKRAALQALKRKKRYEKQLAQID 83
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D + + +
Sbjct: 84 GTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAE 143
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
EI+ + + + E DE+E++AE + LE + + + E+ GP E + LPNVP+
Sbjct: 144 EISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEI--SGP----ETVPLPNVPS 196
>UNIPROTKB|F1S4Z2 [details] [associations]
symbol:CHMP4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 OMA:MKELEAW
EMBL:AEMK01197293 EMBL:CU407167 RefSeq:XP_003134450.3
Ensembl:ENSSSCT00000007957 GeneID:100516767 KEGG:ssc:100516767
Uniprot:F1S4Z2
Length = 224
Score = 132 (51.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 45/179 (25%), Positives = 81/179 (45%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AA+ +D
Sbjct: 25 AIQRLRDTEDMLSKKQEFLEKKIEQELTAAKKH-GTKNKRAALQALKRKKRYEKQLAQID 83
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D + + +
Sbjct: 84 GTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAE 143
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
EI+ + + + E DE+E++AE + LE + + + E+ GP E + LPNVP+
Sbjct: 144 EISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEI--SGP----ETVPLPNVPS 196
>UNIPROTKB|Q08E32 [details] [associations]
symbol:CHMP4B "CHMP4B protein" species:9913 "Bos taurus"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 CTD:128866 OMA:MKELEAW EMBL:DAAA02036490
EMBL:DAAA02036491 EMBL:DAAA02036492 EMBL:BC123447 IPI:IPI00688280
RefSeq:NP_001121978.1 UniGene:Bt.3621 STRING:Q08E32
Ensembl:ENSBTAT00000017812 GeneID:616164 KEGG:bta:616164
InParanoid:Q08E32 NextBio:20899993 Uniprot:Q08E32
Length = 224
Score = 130 (50.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 43/182 (23%), Positives = 79/182 (43%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AA+ +D
Sbjct: 25 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKH-GTKNKRAALQALKRKKRYEKQLAQID 83
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D + + +
Sbjct: 84 GTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAE 143
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEV--PTEGPSEEQEKLDLPNVP 191
EI+ + + + E DE+E++AE + LE + + + E+ P P + LP+ P
Sbjct: 144 EISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEISGPETVPLPSVPSISLPSKP 203
Query: 192 TK 193
K
Sbjct: 204 AK 205
>UNIPROTKB|F1PAK4 [details] [associations]
symbol:TM9SF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR004240
InterPro:IPR005024 Pfam:PF02990 Pfam:PF03357 GO:GO:0016021
GO:GO:0015031 PANTHER:PTHR10766 GeneTree:ENSGT00530000062897
OMA:WYKSTVI EMBL:AAEX03005616 Ensembl:ENSCAFT00000019165
Uniprot:F1PAK4
Length = 820
Score = 138 (53.6 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 51/202 (25%), Positives = 88/202 (43%)
Query: 1 MGNLFV--KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXX 58
+G LF KK K + AI LK + L + Q+ L+ I+ E Q A+
Sbjct: 4 LGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQMAKKH-GIKNKRAA 62
Query: 59 XXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINL 118
DG L +E Q IE A+ V +++ +K ++++
Sbjct: 63 LQALRRKKRLEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQGMKKAYQDMDI 122
Query: 119 EDVQKLMDDTEEAKAYQDEINAILGEKLS---AEDEEEILAEFDNLEAQLAVQEMPEVPT 175
+ V +LM D E + +I+ + + DE+E+L E + LE + +++ V
Sbjct: 123 DKVDELMADITEQQEVAQQISDAISRPVGFGDVVDEDELLEELELLEQEELARDLLTV-- 180
Query: 176 EGPSEEQEKLDLPNVP-TKVPV 196
G EE+ ++LP+VP T +PV
Sbjct: 181 -GDKEEEPPVELPSVPSTHLPV 201
>RGD|1564543 [details] [associations]
symbol:Chmp4c "charged multivesicular body protein 4C"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 RGD:1564543 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS HOGENOM:HOG000209959 KO:K12194 CTD:92421
EMBL:BC092576 IPI:IPI00209669 RefSeq:NP_001017466.2
UniGene:Rn.162567 ProteinModelPortal:Q569C1 STRING:Q569C1
PRIDE:Q569C1 GeneID:361916 KEGG:rno:361916 UCSC:RGD:1564543
InParanoid:Q569C1 NextBio:678036 ArrayExpress:Q569C1
Genevestigator:Q569C1 GermOnline:ENSRNOG00000010238 Uniprot:Q569C1
Length = 232
Score = 130 (50.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L +E Q +E + V ++ A+KA+ ++L + LM D E +
Sbjct: 82 IDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHENMDLNKIDDLMQDITEQQDI 141
Query: 135 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ-----LAVQEMPEVPTEG-PSEEQEKL 185
EI+ +++ A+ DE+E+LAE + LE + + E+P VP+ P++ K
Sbjct: 142 AQEISEAFSQRVQFADGFDEDELLAELEELEQEELNKKMTSMELPNVPSSSLPAQPSRKA 201
Query: 186 DLPNVPTKVPVAS--RVVADD 204
+P+ + AS R DD
Sbjct: 202 GVPSSVHRSRAASSRRAEEDD 222
>MGI|MGI:1913621 [details] [associations]
symbol:Chmp4c "charged multivesicular body protein 4C"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:1913621 GO:GO:0005829 GO:GO:0031902
GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959 KO:K12194
CTD:92421 OMA:KFFKGGG EMBL:AK009273 EMBL:AK010707 EMBL:AK160189
EMBL:BC115983 EMBL:BC117538 IPI:IPI00317752 RefSeq:NP_079795.1
UniGene:Mm.366147 UniGene:Mm.440046 ProteinModelPortal:Q9D7F7
SMR:Q9D7F7 STRING:Q9D7F7 PhosphoSite:Q9D7F7 PaxDb:Q9D7F7
PRIDE:Q9D7F7 Ensembl:ENSMUST00000029049 GeneID:66371 KEGG:mmu:66371
UCSC:uc008opu.1 InParanoid:Q149R2 ChiTaRS:CHMP4C NextBio:321473
Bgee:Q9D7F7 CleanEx:MM_CHMP4C Genevestigator:Q9D7F7
GermOnline:ENSMUSG00000027536 Uniprot:Q9D7F7
Length = 232
Score = 128 (50.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 39/141 (27%), Positives = 66/141 (46%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
VDG L +E Q +E + V ++ A+KA+ ++L + LM D E +
Sbjct: 82 VDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHDNMDLNKIDDLMQDITEQQDI 141
Query: 135 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ-----LAVQEMPEVPTEG-PSEEQEKL 185
EI+ +++ A+ DE E+LAE + LE + + E+P VP+ P++ K
Sbjct: 142 AQEISEAFSQRVQFADGFDEAELLAELEELEQEELNKKMTSLELPNVPSSSLPAQPSRKA 201
Query: 186 DLPNVPTKVPVAS--RVVADD 204
+P+ + AS R DD
Sbjct: 202 SMPSSVHRSRAASSRRAEEDD 222
>ZFIN|ZDB-GENE-050417-389 [details] [associations]
symbol:chmp4c "chromatin modifying protein 4C"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR005024
Pfam:PF03357 ZFIN:ZDB-GENE-050417-389 GO:GO:0015031
eggNOG:NOG291419 HOVERGEN:HBG050928 HOGENOM:HOG000209959 KO:K12194
CTD:92421 EMBL:BC092770 IPI:IPI00506306 RefSeq:NP_001017844.1
UniGene:Dr.84820 ProteinModelPortal:Q568Q1 STRING:Q568Q1
GeneID:550542 KEGG:dre:550542 InParanoid:Q568Q1 OrthoDB:EOG4ZCT5Z
NextBio:20879783 ArrayExpress:Q568Q1 Uniprot:Q568Q1
Length = 239
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L +E Q +E A+ V +++ AIK + +I+L+ + LM D E +
Sbjct: 100 IDGTLSTIEFQRESLENATTNTEVLKNMGYAAKAIKGVHEKIDLDKIDSLMQDITEQQEV 159
Query: 135 QDEINAILGEKLSAE-DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNV-PT 192
EI+ + + + DE+E+LAE LE Q ++E + PS KL P+ P+
Sbjct: 160 AQEISDAISKPFGDQFDEDELLAELAELE-QEDLEESMKSMGRLPSAPTHKL--PSTRPS 216
Query: 193 KVPVASRVVADDAEI 207
+ + V DD ++
Sbjct: 217 HRATSKKRVEDDHDM 231
>UNIPROTKB|I3LG19 [details] [associations]
symbol:CHMP4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 EMBL:CU633211
Ensembl:ENSSSCT00000031697 OMA:SSTNTEV Uniprot:I3LG19
Length = 181
Score = 122 (48.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/150 (24%), Positives = 70/150 (46%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L +E Q +E + V +++ A+KA+ ++L + LM + E +
Sbjct: 26 IDGTLSTIEFQREALENSHTNTEVLKNMGMAAKAMKAVHENMDLNKIDDLMQEITEQQDI 85
Query: 135 QDEINAILGEKLS--AE-DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVP 191
EI+ +++ A+ DE+E++AE + LE + ++M + P+ L P P
Sbjct: 86 AQEISEAFSQRVGFGADFDEDELMAELEELEQEELNKKMTNIRL--PNVPSSSLPAP--P 141
Query: 192 TKVPVASRVVADDAEIAPAEASTKRRVMEE 221
+VP R+ + A++ RR EE
Sbjct: 142 ERVP--GRMANMPSSTPRTRAASSRRAEEE 169
>UNIPROTKB|F1SGN5 [details] [associations]
symbol:TM9SF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR004240
InterPro:IPR005024 Pfam:PF02990 Pfam:PF03357 GO:GO:0016021
GO:GO:0015031 EMBL:CT961055 PANTHER:PTHR10766
GeneTree:ENSGT00530000062897 OMA:WYKSTVI EMBL:CU019590
Ensembl:ENSSSCT00000002237 Uniprot:F1SGN5
Length = 819
Score = 132 (51.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/205 (24%), Positives = 86/205 (41%)
Query: 1 MGNLFV--KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXX----X 54
+G LF KK K + AI LK + L + Q+ L+ I+ E Q A+
Sbjct: 4 LGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGTKNKRVWT 63
Query: 55 XXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQS 114
DG L +E Q IE A+ V +++ +K
Sbjct: 64 GSAALQALRRKKRLERQLAQTDGTLSTLEFQREAIENATTNAEVLRTMEIAAQGMKKAYQ 123
Query: 115 EINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEMP 171
+++++ V +LM D E + +I+ + + D E+E+L E + LE + QE+
Sbjct: 124 DMDIDKVDELMADITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEELEQEELAQELL 183
Query: 172 EVPTEGPSEEQEKLDLPNVP-TKVP 195
+V G E+ + LP+VP T +P
Sbjct: 184 QV---GEKAEEPPIKLPSVPSTHLP 205
>ZFIN|ZDB-GENE-040426-2812 [details] [associations]
symbol:chmp4b "chromatin modifying protein 4B"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2812
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006
KO:K12194 CTD:128866 HOGENOM:HOG000209960 EMBL:BC044191
EMBL:BC071537 IPI:IPI00504193 RefSeq:NP_998622.1 UniGene:Dr.16859
ProteinModelPortal:Q6IQ73 STRING:Q6IQ73 PRIDE:Q6IQ73
Ensembl:ENSDART00000015193 GeneID:406766 KEGG:dre:406766
InParanoid:Q6IQ73 OMA:TISTIEF NextBio:20818281 ArrayExpress:Q6IQ73
Bgee:Q6IQ73 Uniprot:Q6IQ73
Length = 224
Score = 123 (48.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ LA+ Q L+ I+AE A+ +D
Sbjct: 23 AIQKLRETEEMLAKKQDFLEKKIDAELLIAKKN-GTKNKRAALQALKRKKRYEKQLAQID 81
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+K ++++ V LM D E +
Sbjct: 82 GTLSTIEFQREALENANTNTEVLKNMGFAAKAMKTAHENMDIDKVDDLMQDITEQQELAQ 141
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
EI+ + + E DE+E++AE + LE + +++ ++ GP E + LPNVP+
Sbjct: 142 EISDAISRPVGFGEEFDEDELMAELEELEQEELDKDLLQI--SGP----EDVPLPNVPS 194
>ZFIN|ZDB-GENE-040426-906 [details] [associations]
symbol:zgc:56112 "zgc:56112" species:7955 "Danio
rerio" [GO:0015031 "protein transport" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-906 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS KO:K12194
EMBL:BC045919 IPI:IPI00499940 RefSeq:NP_956489.1 UniGene:Dr.935
ProteinModelPortal:Q7ZVC4 STRING:Q7ZVC4 GeneID:393164
KEGG:dre:393164 HOGENOM:HOG000209960 NextBio:20814234
ArrayExpress:Q7ZVC4 Uniprot:Q7ZVC4
Length = 220
Score = 122 (48.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 45/190 (23%), Positives = 75/190 (39%)
Query: 7 KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXX 66
K K AI L+ L + Q+ L+ IE E A+
Sbjct: 13 KGGKSASPQEAIQRLRETEEMLTKKQEFLEKKIEQELVTAKKN-GTKNKRAALQALKRKK 71
Query: 67 XXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMD 126
+DG L +E Q +E A V +++ A+KA ++++ V +LM
Sbjct: 72 RYEKQLAQIDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDNMDIDKVDELMQ 131
Query: 127 DTEEAKAYQDEINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQE 183
D E + EI+ + + + E DE+E+LAE + LE + + + E+ P
Sbjct: 132 DIIEQQELAQEISDAISKPVGFGEEFDEDELLAELEELEQEELDKNLLEIGDNVPLPNVP 191
Query: 184 KLDLPNVPTK 193
LP+ P K
Sbjct: 192 STSLPSRPAK 201
>RGD|1309846 [details] [associations]
symbol:Chmp4b "charged multivesicular body protein 4B"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 RGD:1309846
RGD:1583604 GO:GO:0015031 EMBL:CH473959 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 KO:K12194 OMA:MKELEAW IPI:IPI00199655
RefSeq:XP_002726392.1 RefSeq:XP_003749765.1
Ensembl:ENSRNOT00000052393 GeneID:679886 KEGG:rno:679886 CTD:679886
NextBio:664702 Uniprot:D4A9Z8
Length = 224
Score = 122 (48.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AA+ +D
Sbjct: 25 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKH-GTKNKRAALQALKRKKRYEKQLAQID 83
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D + + +
Sbjct: 84 GTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAE 143
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
+ + + + + E D++E++AE + LE + + + E+ GP E + LPNVP+
Sbjct: 144 QTSTAISKPVGFGEEFDKDELMAELEELEQEELDKNLLEI--SGP----ETVPLPNVPS 196
>RGD|1583604 [details] [associations]
symbol:Chmp4bl1 "chromatin modifying protein 4B-like 1"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 RGD:1309846
RGD:1583604 GO:GO:0015031 EMBL:CH473959 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 KO:K12194 OMA:MKELEAW IPI:IPI00199655
RefSeq:XP_002726392.1 RefSeq:XP_003749765.1
Ensembl:ENSRNOT00000052393 GeneID:679886 KEGG:rno:679886 CTD:679886
NextBio:664702 Uniprot:D4A9Z8
Length = 224
Score = 122 (48.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AI L+ L++ Q+ L+ IE E AA+ +D
Sbjct: 25 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKH-GTKNKRAALQALKRKKRYEKQLAQID 83
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E A+ V +++ A+KA ++++ V +LM D + + +
Sbjct: 84 GTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAE 143
Query: 137 EINAILGEKLS-AE--DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
+ + + + + E D++E++AE + LE + + + E+ GP E + LPNVP+
Sbjct: 144 QTSTAISKPVGFGEEFDKDELMAELEELEQEELDKNLLEI--SGP----ETVPLPNVPS 196
>WB|WBGene00016497 [details] [associations]
symbol:vps-32.2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0032940 GO:GO:0015031 GO:GO:0018996 GO:GO:0040011
eggNOG:NOG291419 GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 EMBL:FO080808 RefSeq:NP_505022.2 UniGene:Cel.26024
ProteinModelPortal:Q22916 SMR:Q22916 STRING:Q22916
EnsemblMetazoa:C37C3.3 GeneID:183288 KEGG:cel:CELE_C37C3.3
UCSC:C37C3.3 CTD:183288 WormBase:C37C3.3 InParanoid:Q22916
OMA:QIHGEYN NextBio:920584 Uniprot:Q22916
Length = 217
Score = 116 (45.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L +E Q +E AS V +K ++A+KA+ + ++ + V+ +MD+ +E +
Sbjct: 80 IDGVLATLEHQRETLENASTNAEVLTVMKLASDALKAVHNNMDSDQVRDMMDNIDEQREV 139
Query: 135 QDEI-NAILGEKLS-AEDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPT 192
EI +AI + A DE ++L E +LE + +++ + P + LP+ P
Sbjct: 140 AKEIADAISNPGFNNAIDEADLLRELVDLEQEALDKDL--LDARAPP-----VTLPDTPN 192
Query: 193 KVPVASRVVADDAE 206
ASR A +A+
Sbjct: 193 IALPASRPRAKEAD 206
>UNIPROTKB|E2R7B4 [details] [associations]
symbol:CHMP4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 CTD:92421 OMA:KFFKGGG
EMBL:AAEX03015910 RefSeq:XP_535115.1 Ensembl:ENSCAFT00000013501
GeneID:477926 KEGG:cfa:477926 NextBio:20853327 Uniprot:E2R7B4
Length = 236
Score = 116 (45.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 37/146 (25%), Positives = 67/146 (45%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L +E Q +E + V ++ A+KA+ ++L + LM + E +
Sbjct: 82 IDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHENMDLNKIDDLMQEITEQQDI 141
Query: 135 QDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEMPEVPTEG-PSEEQEKLDLPNV 190
EI+ +++ D E+E++AE + LE + +M + PS LP
Sbjct: 142 AQEISEAFSQRVGFGDDFDEDELMAELEELEQEALNMKMTNIRLPNVPSSS-----LPAQ 196
Query: 191 PTKVPVASRVVADDAEIAPAEASTKR 216
P ++P + V+ A + A AS+KR
Sbjct: 197 PDRLPGGTSGVSSTAHRSRA-ASSKR 221
>UNIPROTKB|A6H704 [details] [associations]
symbol:CHMP7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045324 "late endosome to vacuole transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005634 GO:GO:0008565 GO:GO:0045324 GO:GO:0000815
GeneTree:ENSGT00530000063571 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
OMA:WDDDERM EMBL:DAAA02023574 EMBL:DAAA02023571 EMBL:DAAA02023572
EMBL:DAAA02023573 EMBL:BC146064 IPI:IPI00691723
RefSeq:NP_001092589.1 UniGene:Bt.4082 STRING:A6H704
Ensembl:ENSBTAT00000017987 GeneID:541288 KEGG:bta:541288
InParanoid:A6H704 NextBio:20879119 Uniprot:A6H704
Length = 450
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 49/226 (21%), Positives = 91/226 (40%)
Query: 7 KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXX 66
K + DVD + L + L++ + L E K+ AR
Sbjct: 230 KVSPVNDVDVGVYQLMQSEQLLSRKVESLSQEAERYKEEARRACRAGKKQLALRSLKAKQ 289
Query: 67 XXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMD 126
+ L V+ L I + + VF + ++G A+K ++ +E + L+D
Sbjct: 290 RTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVD 349
Query: 127 DTEEAKAYQDEINAILGEKLSAE---DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQE 183
+E QDE++ L ++ D EE+ E D L +Q+ + P++ P QE
Sbjct: 350 QIQELCDTQDEVSQTLAGGVTNGLDFDSEELEKELDIL-----LQDTTKEPSDLPYNPQE 404
Query: 184 KLDLPNVP-TKVPVAS------RVVADDAEIAPAEASTKRRVMEEP 222
+ +VP T++ A ++ + + P+ S KR++ EP
Sbjct: 405 TFYINSVPNTRISDAELEAELEKLSLSEGGLVPSRKSPKRQL--EP 448
>UNIPROTKB|P0C149 [details] [associations]
symbol:SNF7 "Vacuolar-sorting protein SNF7" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 GO:GO:0010008
EMBL:CM001236 eggNOG:NOG291419 KO:K12194 OrthoDB:EOG4TMVBN
RefSeq:XP_003719742.1 ProteinModelPortal:P0C149 STRING:P0C149
EnsemblFungi:MGG_04095T0 GeneID:2677595 KEGG:mgr:MGG_04095
Uniprot:P0C149
Length = 226
Score = 112 (44.5 bits), Expect = 0.00011, P = 0.00011
Identities = 47/194 (24%), Positives = 82/194 (42%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
AIL L++Q L + ++ L I + AR I +
Sbjct: 23 AILGLRSQLDMLQKREKHLQNQISEQDAIARKNISTNKNAAKAALKRKKTHEHSLDQTLS 82
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
+ +EQQ+ IE A+ E++K A++ I ++ +E V + MD E A +
Sbjct: 83 Q-IGTLEQQINAIESANINMETLEAMKKAGKAMEDIHGKLTVEKVDETMDKLREQNALSE 141
Query: 137 EI-NAILGEKLSAE--DEEEILAEFDNLEAQLAVQEMPEVPTEGP-SEEQEKLDLPNVPT 192
EI NAI +L E D+ ++ E + +E + +++ + T GP S+ ++L
Sbjct: 142 EIVNAITNNQLGNEAIDDADLEDELEAMEQEQLDEKILKTGT-GPVSDAIQRLPAAANGE 200
Query: 193 KVPVASRVVADDAE 206
A+ V DD E
Sbjct: 201 LKGKATTVEEDDEE 214
>DICTYBASE|DDB_G0277133 [details] [associations]
symbol:DDB_G0277133 "SNF7 family protein"
species:44689 "Dictyostelium discoideum" [GO:0015031 "protein
transport" evidence=IEA] [GO:0045324 "late endosome to vacuole
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0277133 GO:GO:0008565 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0045324 GO:GO:0000815 eggNOG:NOG272120
KO:K15053 RefSeq:XP_642803.1 ProteinModelPortal:Q86K93 PRIDE:Q86K93
EnsemblProtists:DDB0266400 GeneID:8620866 KEGG:ddi:DDB_G0277133
OMA:MAKTYLR ProtClustDB:CLSZ2729144 Uniprot:Q86K93
Length = 477
Score = 113 (44.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/160 (26%), Positives = 78/160 (48%)
Query: 81 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 140
N+ + L IE A + + ESL +G + +K + EI+++ V ++DD ++A Q EI+
Sbjct: 313 NIHEILFSIESAKSNQQIIESLCTGVSTLKKVNQEISVDQVDSILDDYQDAITNQREIDD 372
Query: 141 IL--G----EKLSAED--EEEILAEFDN-LEAQLAV-----QEMPEVPTEGPSEEQEKLD 186
+ G E LS+ D E+++ E D L+ L + Q+ ++ E ++Q
Sbjct: 373 AMKSGFNSVESLSSADIDEDQLEKELDQMLQDHLTLEKEEKQKQKQIEKEKQQQQQPPTS 432
Query: 187 L--PNVPTKVPVASRVVADDAEIAPAEASTKRRVMEEPLP 224
PN+P +P+ + +D + E+ + V PLP
Sbjct: 433 QFNPNLP--IPLKNE---EDELLKELESLS---VTSNPLP 464
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 7 KKPKITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLI 50
K I + D IL L+T L Q + +L IE ++ I
Sbjct: 239 KVQPIQETDFGILKLQTTYETLKQQESKLLTDIEEISNTIKESI 282
>ZFIN|ZDB-GENE-040426-1750 [details] [associations]
symbol:chmp7 "CHMP family, member 7" species:7955
"Danio rerio" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISS] [GO:0045324 "late
endosome to vacuole transport" evidence=ISS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-1750
GO:GO:0008565 GO:GO:0045324 GO:GO:0000815 CTD:91782
eggNOG:NOG272120 HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053
EMBL:BC059625 EMBL:BC066676 IPI:IPI00506588 RefSeq:NP_957075.1
UniGene:Dr.84727 ProteinModelPortal:Q6PBQ2 STRING:Q6PBQ2
PRIDE:Q6PBQ2 GeneID:393754 KEGG:dre:393754 InParanoid:Q6PBQ2
OrthoDB:EOG4HHP33 NextBio:20814753 Uniprot:Q6PBQ2
Length = 457
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 43/183 (23%), Positives = 76/183 (41%)
Query: 11 ITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXX 70
+++VD I L+ + L + + L E KQ A+ L+
Sbjct: 225 VSEVDLGIYQLQCSEKLLEERVEALGHEAEKCKQQAKSLLKEGKKSQALRCLRGSKRVEK 284
Query: 71 XXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEE 130
+ L V+ L I + + V ++ ++G A++ + +E + L+D +E
Sbjct: 285 KADRLFAQLETVKGILDRIANSQTDRLVMQAYQAGVAALRISLKGVTVERAENLVDQIQE 344
Query: 131 AKAYQDEINAIL--GEKLSAEDEEEILAEFDNL-EAQLAVQEM-PEVPTEGPSEEQEKLD 186
QDE+N L G + ED E++ E +L E + ++ P VPT P K D
Sbjct: 345 LCDTQDEVNQTLASGAPDAGEDSEDLEEELKSLMEKSVPENDLFPAVPTH-PITPPRKTD 403
Query: 187 LPN 189
LP+
Sbjct: 404 LPD 406
>ASPGD|ASPL0000017567 [details] [associations]
symbol:vps32 species:162425 "Emericella nidulans"
[GO:0000815 "ESCRT III complex" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0071454
"cellular response to anoxia" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 GO:GO:0010008 EMBL:BN001302
EMBL:AACD01000068 eggNOG:NOG291419 KO:K12194 OMA:MKELEAW
HOGENOM:HOG000209960 RefSeq:XP_661844.1 ProteinModelPortal:Q5B5E0
STRING:Q5B5E0 EnsemblFungi:CADANIAT00004417 GeneID:2873662
KEGG:ani:AN4240.2 OrthoDB:EOG4TMVBN Uniprot:Q5B5E0
Length = 242
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 41/151 (27%), Positives = 69/151 (45%)
Query: 79 LINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQK--LMDDTEEAKAYQD 136
++ +EQQ+ IE A+ ++K+ A++ I + + +E V + L D E +A D
Sbjct: 81 IVQLEQQIYSIEAANINHETLAAMKAAGAAMEKIHNGMTVEQVDETILRDKLREQQAIND 140
Query: 137 EIN-AILGEKLSAE-DEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLP-NVPTK 193
EI AI + DEE++ AE + +E + + M T +++ +L P N K
Sbjct: 141 EIAIAITNPGFGEQVDEEDLEAELEGMEQEAMDERMLHTGTVPVADQLNRLPAPANAERK 200
Query: 194 V---PVASRVVADDAEIAPAEASTKRRVMEE 221
P R D PA A K++ EE
Sbjct: 201 ALPFPPQKRTPTDSL---PA-AKAKQKAEEE 227
>UNIPROTKB|E1C252 [details] [associations]
symbol:CHMP4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 CTD:92421 OMA:KFFKGGG
EMBL:AADN02024760 IPI:IPI00580681 RefSeq:NP_001186404.1
UniGene:Gga.11662 Ensembl:ENSGALT00000025459 GeneID:420201
KEGG:gga:420201 NextBio:20823150 Uniprot:E1C252
Length = 220
Score = 109 (43.4 bits), Expect = 0.00024, P = 0.00024
Identities = 43/194 (22%), Positives = 78/194 (40%)
Query: 17 AILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVD 76
A+ L+ L++ Q+ L+ IE E AR +D
Sbjct: 27 ALARLRETEEMLSKKQEYLESRIERELSLARQH-GTKNKRAALQALKRKKRYEKQLSQID 85
Query: 77 GWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQD 136
G L +E Q +E + V +++ A+K + ++L + LM D E +
Sbjct: 86 GTLSTIEFQREALENSHTNTEVLKNMGYAAQAMKKVHENMDLNKIDDLMQDITEQQDVAQ 145
Query: 137 EINAILGEKLSAEDE---EEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPNVPTK 193
EI+ + + + DE +E++AE + LE + + M +V PS L P++
Sbjct: 146 EISEAISNRAAFGDEFDEDELMAELEELEQEEMNKRMRDVRL--PSVPSTSL-----PSR 198
Query: 194 VPVASRVVADDAEI 207
V R V D+ ++
Sbjct: 199 PAVTRRRVEDEDDM 212
>WB|WBGene00016961 [details] [associations]
symbol:vps-32.1 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0015031 GO:GO:0018996 GO:GO:0071688
GO:GO:0010171 GO:GO:0040011 GO:GO:0010008 EMBL:FO080968
eggNOG:NOG291419 GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 OMA:MKELEAW PIR:T15848 RefSeq:NP_495337.1
ProteinModelPortal:Q18886 SMR:Q18886 STRING:Q18886 PaxDb:Q18886
EnsemblMetazoa:C56C10.3.1 EnsemblMetazoa:C56C10.3.2 GeneID:174091
KEGG:cel:CELE_C56C10.3 UCSC:C56C10.3.1 CTD:174091 WormBase:C56C10.3
InParanoid:Q18886 NextBio:882467 Uniprot:Q18886
Length = 221
Score = 108 (43.1 bits), Expect = 0.00032, P = 0.00032
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L + Q +E AS V + + + A+KA + ++++ V LM+D E +
Sbjct: 79 IDGVLSTIGYQREALENASTNAEVLNVMGTASKALKAAHNNMDIDQVHDLMEDIAEQQEV 138
Query: 135 QDEINAILGEKL---SAEDEEEILAEFDNLEAQLAVQEMPEV---PTEGPSEEQEKLDLP 188
+EI + + +A D+++++ E + LE + +E+ + P P + + LP
Sbjct: 139 ANEIAEAISNPVGFSTAVDDDDLMRELEALEQEELDKELLDARAPPVTLP--DTPNIALP 196
Query: 189 NVPTKVPVASRVVAD 203
VP P A D
Sbjct: 197 AVPASRPRAKEADKD 211
>UNIPROTKB|Q96CF2 [details] [associations]
symbol:CHMP4C "Charged multivesicular body protein 4c"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0016197 "endosomal transport"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0016044 EMBL:CH471068 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS HOGENOM:HOG000209959 KO:K12194 EMBL:AB120734
EMBL:AY329086 EMBL:AK314873 EMBL:BC014321 IPI:IPI00060414
RefSeq:NP_689497.1 UniGene:Hs.183861 PDB:3C3R PDBsum:3C3R
ProteinModelPortal:Q96CF2 SMR:Q96CF2 DIP:DIP-38342N IntAct:Q96CF2
MINT:MINT-6942276 STRING:Q96CF2 PhosphoSite:Q96CF2 DMDM:73917755
PaxDb:Q96CF2 PRIDE:Q96CF2 Ensembl:ENST00000297265 GeneID:92421
KEGG:hsa:92421 UCSC:uc003ycl.3 CTD:92421 GeneCards:GC08P082644
HGNC:HGNC:30599 HPA:HPA023799 MIM:610899 neXtProt:NX_Q96CF2
PharmGKB:PA142672113 InParanoid:Q96CF2 OMA:KFFKGGG
EvolutionaryTrace:Q96CF2 GenomeRNAi:92421 NextBio:77760 Bgee:Q96CF2
CleanEx:HS_CHMP4C Genevestigator:Q96CF2 GermOnline:ENSG00000164695
Uniprot:Q96CF2
Length = 233
Score = 106 (42.4 bits), Expect = 0.00066, P = 0.00066
Identities = 31/141 (21%), Positives = 65/141 (46%)
Query: 75 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 134
+DG L +E Q +E + V ++ A+K++ ++L + LM + E +
Sbjct: 82 IDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQDI 141
Query: 135 QDEINAILGEKLSAED---EEEILAEFDNLEAQLAVQEM-----PEVPTEG-PSEEQEKL 185
EI+ +++ D E+E++AE + LE + ++M P VP+ P++ K
Sbjct: 142 AQEISEAFSQRVGFGDDFDEDELMAELEELEQEELNKKMTNIRLPNVPSSSLPAQPNRKP 201
Query: 186 DLPNVPTKVPVASRVVADDAE 206
+ + + AS A++ +
Sbjct: 202 GMSSTARRSRAASSQRAEEED 222
>UNIPROTKB|G4NFA2 [details] [associations]
symbol:MGG_04174 "SNF7 family protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 EMBL:CM001236
KO:K15053 RefSeq:XP_003719651.1 ProteinModelPortal:G4NFA2
EnsemblFungi:MGG_04174T0 GeneID:2677704 KEGG:mgr:MGG_04174
Uniprot:G4NFA2
Length = 493
Score = 110 (43.8 bits), Expect = 0.00085, P = 0.00085
Identities = 51/212 (24%), Positives = 83/212 (39%)
Query: 11 ITDVDRAILSLKTQRRKLAQYQQQLDVVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXX 70
IT D AI LK R L + L+ IE AA+D +
Sbjct: 249 ITQEDVAIAQLKELREYLGHQTRILERRIEDLAAAAKDAVAKKNRVSALAALKSKKLAET 308
Query: 71 XXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEIN-LEDVQKLMDDTE 129
L +E+ + IE A+ Q + + + + T A++ + +I +E V+ ++D
Sbjct: 309 SLASRFATLSQLEEVASRIEQAADQVQLVKVMDTSTEALRGLNEQIGGVERVEDVVDRLR 368
Query: 130 EAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQ-------------LAVQEMPEVPTE 176
E DE+ IL E DE E+ E LE + Q + E
Sbjct: 369 EQMDAVDEVGTILAESGPGLDEGELDDELAALEGEEKKKEEETAERMRKEAQAVKEAQQI 428
Query: 177 GPSEE-QEKLD-LPNVPTKVPVASRVVADDAE 206
+EE ++KL+ + VPT +P + DA+
Sbjct: 429 KEAEELRQKLNAIGEVPTSLPGTNNPAITDAQ 460
>POMBASE|SPCC162.06c [details] [associations]
symbol:SPCC162.06c "vacuolar sorting protein Vps60
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000329
"fungal-type vacuole membrane" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=ISO] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IC]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPCC162.06c GO:GO:0006886
EMBL:CU329672 GO:GO:0000329 eggNOG:NOG300000 HOGENOM:HOG000191086
KO:K12198 OMA:NQSFNME GO:GO:0032511 GO:GO:0043162 OrthoDB:EOG44J5TG
PIR:T41025 RefSeq:NP_588238.1 ProteinModelPortal:O74422
STRING:O74422 EnsemblFungi:SPCC162.06c.1 GeneID:2538774
KEGG:spo:SPCC162.06c NextBio:20799957 Uniprot:O74422
Length = 210
Score = 104 (41.7 bits), Expect = 0.00087, P = 0.00087
Identities = 27/111 (24%), Positives = 54/111 (48%)
Query: 81 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 140
N+EQ E A ++++ +K+ +++E ++KL D+ ++ E+N
Sbjct: 88 NMEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNE 147
Query: 141 ILGEKLSA--EDEEEILAEFDNLEAQLAVQEMPEVPTEGPSEEQEKLDLPN 189
+LG+ ++ DEEE+ AE + L+ + + + E PS +LPN
Sbjct: 148 VLGQNMTDINVDEEELDAELEALQQESSWLG-DQSTAEKPSYLMPSNELPN 197
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.127 0.329 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 225 201 0.00089 111 3 10 23 0.44 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 574 (61 KB)
Total size of DFA: 179 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.99u 0.16s 34.15t Elapsed: 00:00:02
Total cpu time: 33.99u 0.16s 34.15t Elapsed: 00:00:02
Start: Fri May 10 09:49:30 2013 End: Fri May 10 09:49:32 2013