Citrus Sinensis ID: 027327

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEcccccccccccccccccccccccccccHHccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcEEEccccccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcc
Secondary Structure Prediction (SSPRO)
ccEEcccccHHHEEEccccccccEEEEcccEEEcccccccccccccHcEccHHHHHccccccccccHHHHHHEEHHHHcccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccHHHHHccccEcccccccccccHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHcccccccEEEccc
Coil and Loop (DISEMBL)
MQICHRDLKlentlldgskaprlkicdfgyskssvlhsqpkstvgtpayiapevlsrkeydgkiadvWSCGVTLYVMLVgaypfedpedprnfkTTIQRILSVHYSIPGYVRVSLECRHLLSrifvadpekritipeiqkhpwflknlpiefmeedegsmqkgdendqsQSIEEILGIIQEarkpgegpkfggqcliggsmdlddldtdadtddietsgdfvcal
Flexible Loop (DISEMBL)
mqichrdlklentlldgskaprLKICDFGYSKSsvlhsqpkstvgtpayiAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRifvadpekritipeiqkhpwflKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL
Low Complexity Region (SEG)
MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMdlddldtdadtddIETSGDFVCAL
Disordered region (IsUnstruct)
************TLLDGSKAPRLKICDFGYSKSSVL******TVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEF***********************LGI**************GQCLIGG**************************
Disordered Region (DISOPRED)
MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEED**************************************CLIGGSMDLDDLDTDADTDDIETSGDFVCAL
Disordered Region (DISEMBL)
MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEED*************QSIEEILGIIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL
Disordered Region (DISPRO)
*QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKG******QSIEEILGIIQEARKP***************MDLDDLDTDADTDDIETSGDFVCAL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	225	2.2.26 [Sep-21-2011]
A2YNT8	339	Serine/threonine-protein	N/A	no	0.991	0.657	0.782	4e-97
Q0D4J7	339	Serine/threonine-protein	yes	no	0.991	0.657	0.777	9e-96
Q75LR7	342	Serine/threonine-protein	no	no	0.995	0.654	0.775	2e-94
Q02066	332	Abscisic acid-inducible p	N/A	no	1.0	0.677	0.743	2e-91
Q940H6	362	Serine/threonine-protein	no	no	0.906	0.563	0.712	1e-82
P0C5D6	334	Serine/threonine-protein	no	no	0.831	0.559	0.743	2e-80
A2ZAB5	334	Serine/threonine-protein	N/A	no	0.831	0.559	0.743	2e-80
Q9SMQ4	350	Serine/threonine-protein	no	no	1.0	0.642	0.683	1e-79
Q75H77	362	Serine/threonine-protein	no	no	0.835	0.519	0.728	8e-79
Q9M9E9	343	Serine/threonine-protein	no	no	0.8	0.524	0.762	9e-79

>sp|A2YNT8|SAPK2_ORYSI Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2

 Score =  353 bits (907), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 176/225 (78%), Positives = 194/225 (86%), Gaps = 2/225 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL+RKEY
Sbjct: 117 MQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLARKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDP++PRNF+ TI RILSV Y +P YVRVS+ECRHL
Sbjct: 177 DGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPDYVRVSMECRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+PE+RITIPEI+ HPWFLKNLPIE  +E + S+Q  D N  SQ +EEI+ IIQ
Sbjct: 237 LSRIFVANPEQRITIPEIKNHPWFLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQ 296

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EARKPG+G KF GQ    GSM+LD  D D D  D+E SGDFVCAL
Sbjct: 297 EARKPGDGSKFSGQIPGLGSMELD--DIDTDDIDVEDSGDFVCAL 339

May play a role in signal transduction of hyperosmotic response.
Oryza sativa subsp. indica (taxid: 39946)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q0D4J7|SAPK2_ORYSJ Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica GN=SAPK2 PE=1 SV=1

 Score =  349 bits (895), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 175/225 (77%), Positives = 194/225 (86%), Gaps = 2/225 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS APRLKICDFGYSKSS+LHSQPKSTVGTPAYIAPEVL+RKEY
Sbjct: 117 MQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSLLHSQPKSTVGTPAYIAPEVLARKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDP++PRNF+ TI RILSV Y +P YVRVS+ECRHL
Sbjct: 177 DGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPDYVRVSMECRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+PE+RITIPEI+ HPWFLKNLPIE  +E + S+Q  D N  SQ +EEI+ IIQ
Sbjct: 237 LSRIFVANPEQRITIPEIKNHPWFLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQ 296

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EARKPG+G KF GQ    GSM+LDD+DTD      E SGDFVCAL
Sbjct: 297 EARKPGDGSKFSGQIPGLGSMELDDVDTDDIDV--EDSGDFVCAL 339

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q75LR7|SAPK1_ORYSJ Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1

 Score =  345 bits (884), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 176/227 (77%), Positives = 191/227 (84%), Gaps = 3/227 (1%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS  PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY
Sbjct: 117 MQVCHRDLKLENTLLDGSVTPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDP+DPRNF+ TI RILSV YSIP YVRVS +CRHL
Sbjct: 177 DGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFV +PE+RITIPEI+ HPWFLKNLPIE  +E + SMQ  D N  SQS+EE++ IIQ
Sbjct: 237 LSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQ 296

Query: 181 EARKPGEGPKF--GGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EARKPG+  K    GQ    GSMDLDD+D   D D  E SGDFVCAL
Sbjct: 297 EARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDIDI-ENSGDFVCAL 342

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q02066|AAIP_WHEAT Abscisic acid-inducible protein kinase (Fragment) OS=Triticum aestivum PE=2 SV=1

 Score =  335 bits (858), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 168/226 (74%), Positives = 191/226 (84%), Gaps = 1/226 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR+EY
Sbjct: 107 MQVCHRDLKLENTLLDGSVAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREY 166

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDP++PRNF+ TI RILSV YS+P YVRVS++C HL
Sbjct: 167 DGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYSVPDYVRVSMDCIHL 226

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFV +P++RITIPEI+ HPWFLK LP+E  +E + SMQ  D N  SQS+EE + IIQ
Sbjct: 227 LSRIFVGNPQQRITIPEIKNHPWFLKRLPVEMTDEYQRSMQLADMNTPSQSLEEAMAIIQ 286

Query: 181 EARKPGEGP-KFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EA+KPG+      GQ    GSMDLDD+D D D  D+E+SGDFVC L
Sbjct: 287 EAQKPGDNALGVAGQVACLGSMDLDDIDFDIDDIDVESSGDFVCPL 332

Involved in water-stress responses.

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q940H6|SRK2E_ARATH Serine/threonine-protein kinase SRK2E OS=Arabidopsis thaliana GN=SRK2E PE=1 SV=1

 Score =  305 bits (782), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 146/205 (71%), Positives = 168/205 (81%), Gaps = 1/205 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEY
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPE+P+NF+ TI RIL+V Y+IP YV +S ECRHL
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           +SRIFVADP KRI+IPEI+ H WFLKNLP + M ++  + Q  + +   QSIEEI+ II 
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIA 313

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDD 205
           EA  P  G +     L  GS+D+DD
Sbjct: 314 EATVPPAGTQNLNHYLT-GSLDIDD 337

Activator of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as stomata closure in response to drought, plant pathogens, or decreases in atmospheric relative humidity (RH). Involved in the resistance to drought by avoiding water loss. Required for the stomata closure mediated by pathogen-associated molecular pattern (PAMPs) (e.g. flg22 and LPS) of pathogenic bacteria such as P.syringae pv. tomato (Pst) and E.coli O157:H7. As a plant defense process, stomata are closed transiently in order to limit invaders, but actively reopened by bacteria after a few hours; virulent strains (e.g. Pst DC3000) are more efficient than avirulent strains (e.g. Pst DC3000 AvrRpt2) in reopening stomata. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1, and thus promotes stomata closure. Essential for stomatal closure in response to reactive oxygen species (ROS).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0C5D6|SAPK3_ORYSJ Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. japonica GN=SAPK3 PE=1 SV=1

 Score =  298 bits (763), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 139/187 (74%), Positives = 160/187 (85%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ICHRDLKLENTLLDGS  PR+KICDFGYSKS++LHS+PKSTVGTPAYIAPEVLSRKEY
Sbjct: 118 LEICHRDLKLENTLLDGSPTPRVKICDFGYSKSALLHSKPKSTVGTPAYIAPEVLSRKEY 177

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVG+YPFEDP DPRNF+ TI RIL V YSIP YVRVS +CR L
Sbjct: 178 DGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRRL 237

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LS+IFVADP KRITIPEI+KH WFLKNLP E  E ++   +  D    +Q++EEI+ IIQ
Sbjct: 238 LSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKDTDAAPPTQAVEEIMRIIQ 297

Query: 181 EARKPGE 187
           EA+ PG+
Sbjct: 298 EAKVPGD 304

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2ZAB5|SAPK3_ORYSI Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. indica GN=SAPK3 PE=1 SV=2

 Score =  298 bits (763), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 139/187 (74%), Positives = 160/187 (85%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ICHRDLKLENTLLDGS  PR+KICDFGYSKS++LHS+PKSTVGTPAYIAPEVLSRKEY
Sbjct: 118 LEICHRDLKLENTLLDGSPTPRVKICDFGYSKSALLHSKPKSTVGTPAYIAPEVLSRKEY 177

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVG+YPFEDP DPRNF+ TI RIL V YSIP YVRVS +CR L
Sbjct: 178 DGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRRL 237

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LS+IFVADP KRITIPEI+KH WFLKNLP E  E ++   +  D    +Q++EEI+ IIQ
Sbjct: 238 LSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKDTDAAPPTQAVEEIMRIIQ 297

Query: 181 EARKPGE 187
           EA+ PG+
Sbjct: 298 EAKVPGD 304

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SMQ4|SRK2F_ARATH Serine/threonine-protein kinase SRK2F OS=Arabidopsis thaliana GN=SRK2F PE=1 SV=1

 Score =  296 bits (757), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/234 (68%), Positives = 182/234 (77%), Gaps = 9/234 (3%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS +  LKICDFGYSKSSVLHSQPKSTVGTPAY+APEVLSRKEY
Sbjct: 117 MQICHRDLKLENTLLDGSPSSHLKICDFGYSKSSVLHSQPKSTVGTPAYVAPEVLSRKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           +GKIADVWSCGVTLYVMLVGAYPFEDPEDPRN + TIQRILSVHY+IP YVR+S EC+HL
Sbjct: 177 NGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNIRNTIQRILSVHYTIPDYVRISSECKHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKN---LPIEFMEEDEGSMQKGDENDQ-SQSIEEIL 176
           LSRIFVADP+KRIT+PEI+KHPWFLK    +P E  + D G  ++ +E ++  QS+EEI+
Sbjct: 237 LSRIFVADPDKRITVPEIEKHPWFLKGPLVVPPEEEKCDNGVEEEEEEEEKCRQSVEEIV 296

Query: 177 GIIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDI-----ETSGDFVCAL 225
            II+EARK   G    G   +       D   DAD  D      E +GDFVCAL
Sbjct: 297 KIIEEARKGVNGTDNNGGLGLIDGSIDLDDIDDADIYDDVDDDEERNGDFVCAL 350

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q75H77|SAPKA_ORYSJ Serine/threonine-protein kinase SAPK10 OS=Oryza sativa subsp. japonica GN=SAPK10 PE=2 SV=1

 Score =  293 bits (749), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 137/188 (72%), Positives = 158/188 (84%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEY
Sbjct: 136 MQVCHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 195

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDP++P+NF+ TIQRIL V YSIP YV +S ECR L
Sbjct: 196 DGKIADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTIQRILGVQYSIPDYVHISPECRDL 255

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           ++RIFVA+P  RI+IPEI+ HPWFLKNLP + M++ + S Q  +     QS++EI+ I+ 
Sbjct: 256 IARIFVANPATRISIPEIRNHPWFLKNLPADLMDDSKMSSQYEEPEQPMQSMDEIMQILA 315

Query: 181 EARKPGEG 188
           EA  P  G
Sbjct: 316 EATIPAAG 323

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M9E9|SRK2C_ARATH Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana GN=SRK2C PE=1 SV=1

 Score =  293 bits (749), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 141/185 (76%), Positives = 158/185 (85%), Gaps = 5/185 (2%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +QICHRDLKLENTLLDGS+APR+KICDFGYSKS VLHSQPK+TVGTPAYIAPEVLS KEY
Sbjct: 117 LQICHRDLKLENTLLDGSEAPRVKICDFGYSKSGVLHSQPKTTVGTPAYIAPEVLSTKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDP DP++F+ TI RIL   Y+IP YVRVS ECRHL
Sbjct: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPSDPKDFRKTIGRILKAQYAIPDYVRVSDECRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+PEKRITI EI+ H WFLKNLP+E     EGS+        +Q++EEI+ II+
Sbjct: 237 LSRIFVANPEKRITIEEIKNHSWFLKNLPVEMY---EGSLMMN--GPSTQTVEEIVWIIE 291

Query: 181 EARKP 185
           EARKP
Sbjct: 292 EARKP 296

Involved in gene regulation and confers tolerance to drought and osmotic stress.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
255581732	313	Serine/threonine-protein kinase SAPK1, p	0.986	0.709	0.848	1e-101
224093726	340	predicted protein [Populus trichocarpa]	0.995	0.658	0.835	1e-100
356525451	345	PREDICTED: serine/threonine-protein kina	0.995	0.649	0.834	1e-100
356512678	343	PREDICTED: serine/threonine-protein kina	0.995	0.653	0.833	1e-100
217072090	339	unknown [Medicago truncatula]	0.991	0.657	0.84	2e-98
356525453	357	PREDICTED: serine/threonine-protein kina	0.995	0.627	0.785	1e-97
388493784	339	unknown [Medicago truncatula]	0.991	0.657	0.835	2e-97
359497246	338	PREDICTED: serine/threonine-protein kina	0.986	0.656	0.831	7e-96
359480471	338	PREDICTED: serine/threonine-protein kina	0.986	0.656	0.831	7e-96
158513656	339	RecName: Full=Serine/threonine-protein k	0.991	0.657	0.782	2e-95

>gi|255581732|ref|XP_002531668.1| Serine/threonine-protein kinase SAPK1, putative [Ricinus communis] gi|223528699|gb|EEF30712.1| Serine/threonine-protein kinase SAPK1, putative [Ricinus communis]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/224 (84%), Positives = 201/224 (89%), Gaps = 2/224 (0%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           QICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD
Sbjct: 92  QICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 151

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNF+ TIQRILSVHYSIP YVRV+ EC+HLL
Sbjct: 152 GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIQRILSVHYSIPDYVRVTTECKHLL 211

Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE 181
           SRIFVADPEKRITIPEI+KHPWFLK+LPIEFMEE +G +Q  D  ++SQSIEEIL IIQE
Sbjct: 212 SRIFVADPEKRITIPEIKKHPWFLKDLPIEFMEEGDGGLQNADNGEESQSIEEILAIIQE 271

Query: 182 ARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           ARKP +G K GG  LIGGSMDLDD+D     D  ETSGDFVCAL
Sbjct: 272 ARKPADGLKLGGH-LIGGSMDLDDIDDADIDDI-ETSGDFVCAL 313

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093726|ref|XP_002309964.1| predicted protein [Populus trichocarpa] gi|222852867|gb|EEE90414.1| predicted protein [Populus trichocarpa]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/225 (83%), Positives = 203/225 (90%), Gaps = 1/225 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDG+ APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY
Sbjct: 117 MQICHRDLKLENTLLDGTTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDPED RNF+ TIQRILSVHYSIP YVRVS EC+HL
Sbjct: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDSRNFRKTIQRILSVHYSIPDYVRVSKECKHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVADPEKRITIPEI+ H WFL++ P+E  EE++GS+Q  D N++SQSIEEIL IIQ
Sbjct: 237 LSRIFVADPEKRITIPEIRTHSWFLRSFPVELKEEEDGSLQIDDRNEESQSIEEILAIIQ 296

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EARKP EG K GG    GGSMDLDD+D+DAD DD+ETSGDFVCAL
Sbjct: 297 EARKPAEGHKIGGH-FFGGSMDLDDIDSDADIDDVETSGDFVCAL 340

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525451|ref|XP_003531338.1| PREDICTED: serine/threonine-protein kinase SAPK2-like isoform 1 [Glycine max]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/230 (83%), Positives = 208/230 (90%), Gaps = 6/230 (2%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M+ICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR+EY
Sbjct: 117 MEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPEDPRNF+ T+QRILSVHYSIP YVR+S ECRHL
Sbjct: 177 DGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISKECRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDE-NDQS----QSIEEI 175
           LSRIFVA+PEKRITIPEI+ HPWFLKNLP+EFM+E EG +Q  D  N++S    QSIEEI
Sbjct: 237 LSRIFVANPEKRITIPEIKMHPWFLKNLPLEFMDEGEGVLQNDDHVNEESSEITQSIEEI 296

Query: 176 LGIIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           L I+QEARKPGEGPK G Q  +GGSMDLDD+D DAD DDIETSGDFVCAL
Sbjct: 297 LAIVQEARKPGEGPKVGEQ-FVGGSMDLDDIDADADIDDIETSGDFVCAL 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512678|ref|XP_003525044.1| PREDICTED: serine/threonine-protein kinase SAPK2-like [Glycine max]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/228 (83%), Positives = 206/228 (90%), Gaps = 4/228 (1%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M+ICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR+EY
Sbjct: 117 MEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPEDPRNF+ T+QRILSVHYSIP YVR+S ECR+L
Sbjct: 177 DGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISKECRYL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDEND---QSQSIEEILG 177
           LSRIFVA+PEKRITIPEI+ HPWFLKNLP+EFM+E EG +Q  D ND   ++QSIEEIL 
Sbjct: 237 LSRIFVANPEKRITIPEIKMHPWFLKNLPLEFMDESEGVLQNDDVNDDSSETQSIEEILS 296

Query: 178 IIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           IIQEARKP EGPK   Q  +GGSMDLDD+D DAD DDIETSGDFVCAL
Sbjct: 297 IIQEARKPSEGPKVSEQ-FVGGSMDLDDIDADADIDDIETSGDFVCAL 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072090|gb|ACJ84405.1| unknown [Medicago truncatula]

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/225 (84%), Positives = 205/225 (91%), Gaps = 2/225 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M+ICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR+EY
Sbjct: 117 MEICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDPEDP+NFK T+QRILSVHYSIP YVR++ ECRHL
Sbjct: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFKKTLQRILSVHYSIPDYVRITQECRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+P+KRITIPEI+KHPWFLKNLP+EFME+ E   Q  DE++ SQ+IEEIL IIQ
Sbjct: 237 LSRIFVANPDKRITIPEIKKHPWFLKNLPLEFMEDGENWSQ-NDESNSSQNIEEILTIIQ 295

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EA K G+GPK G Q  +GGSMD DDLDTDAD DDIETSGDFVCAL
Sbjct: 296 EAMKAGDGPKVGDQ-FLGGSMDFDDLDTDADIDDIETSGDFVCAL 339

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525453|ref|XP_003531339.1| PREDICTED: serine/threonine-protein kinase SAPK2-like isoform 2 [Glycine max]

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 190/242 (78%), Positives = 207/242 (85%), Gaps = 18/242 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK------------SSVLHSQPKSTVGTPA 48
           M+ICHRDLKLENTLLDGS APRLKICDFGYSK            SSVLHSQPKSTVGTPA
Sbjct: 117 MEICHRDLKLENTLLDGSSAPRLKICDFGYSKLITQLYVRIFLQSSVLHSQPKSTVGTPA 176

Query: 49  YIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP 108
           YIAPEVLSR+EYDGK+ADVWSCGVTLYVMLVGAYPFEDPEDPRNF+ T+QRILSVHYSIP
Sbjct: 177 YIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIP 236

Query: 109 GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQ 168
            YVR+S ECRHLLSRIFVA+PEKRITIPEI+ HPWFLKNLP+EFM+E EG +Q  D  ++
Sbjct: 237 DYVRISKECRHLLSRIFVANPEKRITIPEIKMHPWFLKNLPLEFMDEGEGVLQNDDHVNE 296

Query: 169 -----SQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVC 223
                +QSIEEIL I+QEARKPGEGPK G Q  +GGSMDLDD+D DAD DDIETSGDFVC
Sbjct: 297 ESSEITQSIEEILAIVQEARKPGEGPKVGEQ-FVGGSMDLDDIDADADIDDIETSGDFVC 355

Query: 224 AL 225
           AL
Sbjct: 356 AL 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493784|gb|AFK34958.1| unknown [Medicago truncatula]

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 188/225 (83%), Positives = 203/225 (90%), Gaps = 2/225 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M+ICHRDLKLENTLLDGS APRLKICDFGYSKSSVLH QPKSTVGTPAYIAPEVLSR+EY
Sbjct: 117 MEICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHCQPKSTVGTPAYIAPEVLSRREY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDPEDP+NFK T+QRILSVHYSIP YVR++ ECRHL
Sbjct: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFKKTLQRILSVHYSIPDYVRITQECRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+P+KRITIPEI+KHPWFLKNLP+EFME+ E   Q  DE++ SQ+IEEIL IIQ
Sbjct: 237 LSRIFVANPDKRITIPEIKKHPWFLKNLPLEFMEDGENWSQ-NDESNSSQNIEEILTIIQ 295

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EA K G+GPK G Q   GGSMD DDLDTDAD DDIETSGDFVCAL
Sbjct: 296 EAMKAGDGPKVGDQ-FFGGSMDFDDLDTDADIDDIETSGDFVCAL 339

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497246|ref|XP_002262731.2| PREDICTED: serine/threonine-protein kinase SAPK2-like [Vitis vinifera] gi|296088948|emb|CBI38514.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (911), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 187/225 (83%), Positives = 198/225 (88%), Gaps = 3/225 (1%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY
Sbjct: 117 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDP+DPRNF+ TI RILSVHYSIP YVRVS+EC+HL
Sbjct: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTIARILSVHYSIPDYVRVSMECKHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+PEKRITIPEIQ HPWF++NLPIEFM+  E S Q    ND SQSI++I+ IIQ
Sbjct: 237 LSRIFVANPEKRITIPEIQNHPWFIRNLPIEFMQGGEASAQTDYVNDPSQSIDDIVKIIQ 296

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EAR   EGPK GG    G SMDLDDLD DAD DDIE SGDFVCAL
Sbjct: 297 EARI--EGPKVGGH-FFGASMDLDDLDEDADLDDIEASGDFVCAL 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480471|ref|XP_003632469.1| PREDICTED: serine/threonine-protein kinase SAPK2-like [Vitis vinifera] gi|297741826|emb|CBI33139.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (911), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 187/225 (83%), Positives = 198/225 (88%), Gaps = 3/225 (1%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY
Sbjct: 117 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDP+DPRNF+ TI RILSVHYSIP YVRVS+EC+HL
Sbjct: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTIARILSVHYSIPDYVRVSMECKHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+PEKRITIPEIQ HPWF++NLPIEFM+  E S Q    ND SQSI++I+ IIQ
Sbjct: 237 LSRIFVANPEKRITIPEIQNHPWFIRNLPIEFMQGGEASAQTDYVNDPSQSIDDIVKIIQ 296

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EAR   EGPK GG    G SMDLDDLD DAD DDIE SGDFVCAL
Sbjct: 297 EARI--EGPKVGGH-FFGASMDLDDLDEDADLDDIEASGDFVCAL 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158513656|sp|A2YNT8.2|SAPK2_ORYSI RecName: Full=Serine/threonine-protein kinase SAPK2; AltName: Full=Osmotic stress/abscisic acid-activated protein kinase 2 gi|218200043|gb|EEC82470.1| hypothetical protein OsI_26911 [Oryza sativa Indica Group]

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 176/225 (78%), Positives = 194/225 (86%), Gaps = 2/225 (0%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL+RKEY
Sbjct: 117 MQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLARKEY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDP++PRNF+ TI RILSV Y +P YVRVS+ECRHL
Sbjct: 177 DGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPDYVRVSMECRHL 236

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           LSRIFVA+PE+RITIPEI+ HPWFLKNLPIE  +E + S+Q  D N  SQ +EEI+ IIQ
Sbjct: 237 LSRIFVANPEQRITIPEIKNHPWFLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQ 296

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTDDIETSGDFVCAL 225
           EARKPG+G KF GQ    GSM+LD  D D D  D+E SGDFVCAL
Sbjct: 297 EARKPGDGSKFSGQIPGLGSMELD--DIDTDDIDVEDSGDFVCAL 339

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
TAIR|locus:2140104	350	SNRK2.7 "SNF1-related protein	1.0	0.642	0.683	6.8e-79
TAIR|locus:2118929	362	OST1 "OPEN STOMATA 1" [Arabido	0.831	0.516	0.761	7.3e-75
TAIR|locus:2032075	343	SNRK2-8 "SNF1-RELATED PROTEIN	0.8	0.524	0.762	9.6e-73
TAIR|locus:2159597	353	SNRK2.1 "SNF1-related protein	0.822	0.524	0.718	1.8e-71
TAIR|locus:2174999	361	SNRK2.3 "sucrose nonfermenting	0.822	0.512	0.745	2.9e-71
TAIR|locus:2206046	361	SNRK2.10 "SNF1-related protein	0.822	0.512	0.731	6.1e-71
TAIR|locus:2160559	360	SNRK2.5 "SNF1-related protein	0.822	0.513	0.725	9.9e-71
TAIR|locus:2045319	339	SNRK2.9 "SNF1-related protein	0.813	0.539	0.688	9.4e-66
TAIR|locus:2183720	445	CIPK5 "CBL-interacting protein	0.764	0.386	0.409	3.4e-29
TAIR|locus:2152370	483	CIPK19 "CBL-interacting protei	0.844	0.393	0.389	3e-28

TAIR|locus:2140104 SNRK2.7 "SNF1-related protein kinase 2.7" [Arabidopsis thaliana (taxid:3702)]

 Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
 Identities = 160/234 (68%), Positives = 183/234 (78%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             MQICHRDLKLENTLLDGS +  LKICDFGYSKSSVLHSQPKSTVGTPAY+APEVLSRKEY
Sbjct:   117 MQICHRDLKLENTLLDGSPSSHLKICDFGYSKSSVLHSQPKSTVGTPAYVAPEVLSRKEY 176

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             +GKIADVWSCGVTLYVMLVGAYPFEDPEDPRN + TIQRILSVHY+IP YVR+S EC+HL
Sbjct:   177 NGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNIRNTIQRILSVHYTIPDYVRISSECKHL 236

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKN---LPIEFMEEDEGSMQKGDENDQS-QSIEEIL 176
             LSRIFVADP+KRIT+PEI+KHPWFLK    +P E  + D G  ++ +E ++  QS+EEI+
Sbjct:   237 LSRIFVADPDKRITVPEIEKHPWFLKGPLVVPPEEEKCDNGVEEEEEEEEKCRQSVEEIV 296

Query:   177 GIIQEARKPGEGP-KFGGQCLIGGSMXXXXXXXXXXXXXI----ETSGDFVCAL 225
              II+EARK   G    GG  LI GS+             +    E +GDFVCAL
Sbjct:   297 KIIEEARKGVNGTDNNGGLGLIDGSIDLDDIDDADIYDDVDDDEERNGDFVCAL 350

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2118929 OST1 "OPEN STOMATA 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
 Identities = 144/189 (76%), Positives = 162/189 (85%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             MQ+CHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEY
Sbjct:   134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             DGK+ADVWSCGVTLYVMLVGAYPFEDPE+P+NF+ TI RIL+V Y+IP YV +S ECRHL
Sbjct:   194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQ-SQSIEEILGII 179
             +SRIFVADP KRI+IPEI+ H WFLKNLP + M ++  + Q  DE+DQ  QSIEEI+ II
Sbjct:   254 ISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQF-DESDQPGQSIEEIMQII 312

Query:   180 QEARKPGEG 188
              EA  P  G
Sbjct:   313 AEATVPPAG 321

GO:0004672 "protein kinase activity" evidence=IEA;IDA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009414 "response to water deprivation" evidence=IGI;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IDA;IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0009931 "calcium-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010118 "stomatal movement" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0005829 "cytosol" evidence=RCA;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005985 "sucrose metabolic process" evidence=IMP

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IMP

GO:0019432 "triglyceride biosynthetic process" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0048366 "leaf development" evidence=IMP

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

TAIR|locus:2032075 SNRK2-8 "SNF1-RELATED PROTEIN KINASE 2-8" [Arabidopsis thaliana (taxid:3702)]

 Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
 Identities = 141/185 (76%), Positives = 159/185 (85%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             +QICHRDLKLENTLLDGS+APR+KICDFGYSKS VLHSQPK+TVGTPAYIAPEVLS KEY
Sbjct:   117 LQICHRDLKLENTLLDGSEAPRVKICDFGYSKSGVLHSQPKTTVGTPAYIAPEVLSTKEY 176

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             DGKIADVWSCGVTLYVMLVGAYPFEDP DP++F+ TI RIL   Y+IP YVRVS ECRHL
Sbjct:   177 DGKIADVWSCGVTLYVMLVGAYPFEDPSDPKDFRKTIGRILKAQYAIPDYVRVSDECRHL 236

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
             LSRIFVA+PEKRITI EI+ H WFLKNLP+E  E   GS+     +  +Q++EEI+ II+
Sbjct:   237 LSRIFVANPEKRITIEEIKNHSWFLKNLPVEMYE---GSLMMNGPS--TQTVEEIVWIIE 291

Query:   181 EARKP 185
             EARKP
Sbjct:   292 EARKP 296

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

GO:0005737 "cytoplasm" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=IGI

TAIR|locus:2159597 SNRK2.1 "SNF1-related protein kinase 2.1" [Arabidopsis thaliana (taxid:3702)]

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 133/185 (71%), Positives = 155/185 (83%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             +QICHRDLKLENTLLDGS AP LKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVLSR+EY
Sbjct:   117 LQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSILHSRPKSTVGTPAYIAPEVLSRREY 176

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             DGK ADVWSCGVTLYVMLVGAYPFEDP DP+NF+ TIQRI++V Y IP YV +S EC+HL
Sbjct:   177 DGKHADVWSCGVTLYVMLVGAYPFEDPNDPKNFRKTIQRIMAVQYKIPDYVHISQECKHL 236

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
             LSRIFV +  KRIT+ EI+ HPW+LKNLP E +E  + +  K D +   QS+E+I+ I+ 
Sbjct:   237 LSRIFVTNSAKRITLKEIKNHPWYLKNLPKELLESAQAAYYKRDTSFSLQSVEDIMKIVG 296

Query:   181 EARKP 185
             EAR P
Sbjct:   297 EARNP 301

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;TAS

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

TAIR|locus:2174999 SNRK2.3 "sucrose nonfermenting 1(SNF1)-related protein kinase 2.3" [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 138/185 (74%), Positives = 153/185 (82%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             MQICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL R+EY
Sbjct:   135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             DGKIADVWSCGVTLYVMLVGAYPFEDPE+PR+++ TIQRILSV YSIP  +R+S EC HL
Sbjct:   195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
             +SRIFVADP  RI+IPEI+ H WFLKNLP + M E     Q  +     QS++ I+ II 
Sbjct:   255 ISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIIS 314

Query:   181 EARKP 185
             EA  P
Sbjct:   315 EATIP 319

GO:0004672 "protein kinase activity" evidence=IEA;IDA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IGI

GO:0005829 "cytosol" evidence=RCA;IDA

GO:0009739 "response to gibberellin stimulus" evidence=IGI

GO:0010029 "regulation of seed germination" evidence=IGI;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IGI

TAIR|locus:2206046 SNRK2.10 "SNF1-related protein kinase 2.10" [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 136/186 (73%), Positives = 156/186 (83%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             MQICHRDLKLENTLLDGS APRLKICDFGYSKSS+LHS PKSTVGTPAYIAPEVLSR EY
Sbjct:   117 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSMPKSTVGTPAYIAPEVLSRGEY 176

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             DGK+ADVWSCGVTLYVMLVGAYPFED EDP+NFK TIQRI++V Y IP YV +S +C+HL
Sbjct:   177 DGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFKKTIQRIMAVKYKIPDYVHISQDCKHL 236

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGS-MQKGDENDQSQSIEEILGII 179
             LSRIFV +  KRITI +I+KHPWFLKNLP E  E  + +  +K +     QS+EEI+ I+
Sbjct:   237 LSRIFVTNSNKRITIGDIKKHPWFLKNLPRELTEIAQAAYFRKENPTFSLQSVEEIMKIV 296

Query:   180 QEARKP 185
             +EA+ P
Sbjct:   297 EEAKTP 302

GO:0005886 "plasma membrane" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;RCA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0048527 "lateral root development" evidence=IMP

GO:0070300 "phosphatidic acid binding" evidence=IDA

TAIR|locus:2160559 SNRK2.5 "SNF1-related protein kinase 2.5" [Arabidopsis thaliana (taxid:3702)]

 Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
 Identities = 135/186 (72%), Positives = 155/186 (83%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             +QICHRDLKLENTLLDGS AP LKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVLSR+EY
Sbjct:   117 LQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 176

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             DGK ADVWSCGVTLYVMLVG YPFEDP+DPRNF+ TIQRI++V Y IP YV +S ECRHL
Sbjct:   177 DGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHL 236

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQS-QSIEEILGII 179
             LSRIFV +  KRIT+ EI+KHPW+LKNLP E  E  + +  K +    S QS+E+I+ I+
Sbjct:   237 LSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIV 296

Query:   180 QEARKP 185
              EAR P
Sbjct:   297 GEARNP 302

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

TAIR|locus:2045319 SNRK2.9 "SNF1-related protein kinase 2.9" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 128/186 (68%), Positives = 147/186 (79%)

Query:     1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             +QICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHS PKSTVGTPAYIAPEV  R EY
Sbjct:   117 LQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSNPKSTVGTPAYIAPEVFCRSEY 176

Query:    61 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             DGK  DVWSCGV LYVMLVGAYPFEDP+DPRNF+ T+Q+I++V+Y IPGYV +S +CR L
Sbjct:   177 DGKSVDVWSCGVALYVMLVGAYPFEDPKDPRNFRKTVQKIMAVNYKIPGYVHISEDCRKL 236

Query:   121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDEN---DQSQSIEEILG 177
             LSRIFVA+P  R T+ EI+ H WFLKNLP E  E  +    + + N      Q +EEI+ 
Sbjct:   237 LSRIFVANPLHRSTLKEIKSHAWFLKNLPRELKEPAQAIYYQRNVNLINFSPQRVEEIMK 296

Query:   178 IIQEAR 183
             I+ EAR
Sbjct:   297 IVGEAR 302

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2183720 CIPK5 "CBL-interacting protein kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 81/198 (40%), Positives = 110/198 (55%)

Query:     3 ICHRDLKLENTLLDGSKAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 55
             + HRDLK EN LLD +    LKI DFG S       +  +LH+Q     GTPAY+APEVL
Sbjct:   131 VSHRDLKPENLLLDENGD--LKISDFGLSALPEQILQDGLLHTQ----CGTPAYVAPEVL 184

Query:    56 SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
              +K YDG  AD+WSCGV LYV+L G  PF+D     N     ++I    +  P +   S 
Sbjct:   185 KKKGYDGAKADIWSCGVVLYVLLAGCLPFQD----ENLMNMYRKIFRADFEFPPWF--SP 238

Query:   116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL--PIEFMEEDEGSMQKGDENDQSQSIE 173
             E R L+S++ V DP++RI+IP I + PW  KN   P+ F + DE    +  +N++    E
Sbjct:   239 EARRLISKLLVVDPDRRISIPAIMRTPWLRKNFTPPLAF-KIDEPICSQSSKNNEE---E 294

Query:   174 EILGIIQEARKPGEGPKF 191
             E  G  +   +P   PKF
Sbjct:   295 EEDGDCENQTEP-ISPKF 311

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2152370 CIPK19 "CBL-interacting protein kinase 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 3.0e-28, P = 3.0e-28
 Identities = 79/203 (38%), Positives = 109/203 (53%)

Query:     3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKE 59
             + HRDLK EN LLD +    LK+ DFG S  S    Q     +  GTPAY+APEVL+RK 
Sbjct:   146 VYHRDLKPENLLLDENG--NLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKG 203

Query:    60 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
             YDG   D+WSCGV L+V++ G  PF D    RN     ++I    +  P +  V  E   
Sbjct:   204 YDGAKVDIWSCGVILFVLMAGFLPFHD----RNVMAMYKKIYRGDFRCPRWFPV--EINR 257

Query:   120 LLSRIFVADPEKRITIPEIQKHPWFLKNLP-IEFMEEDEGSMQKGDENDQSQSIEEILGI 178
             LL R+    PE+R T+P+I +  WF K    I+F  ED+  +    ++D+ +SIE + G 
Sbjct:   258 LLIRMLETKPERRFTMPDIMETSWFKKGFKHIKFYVEDDHQLCNVADDDEIESIESVSGR 317

Query:   179 IQEARKPGEGPKFGGQCLIGGSM 201
                  +P +   F G+   GGSM
Sbjct:   318 SSTVSEPEDFESFDGRRR-GGSM 339

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0D4J7	SAPK2_ORYSJ	2, ., 7, ., 1, 1, ., 1	0.7777	0.9911	0.6578	yes	no
Q02066	AAIP_WHEAT	2, ., 7, ., 1, 1, ., 1	0.7433	1.0	0.6777	N/A	no
A2YNT8	SAPK2_ORYSI	2, ., 7, ., 1, 1, ., 1	0.7822	0.9911	0.6578	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.946
3rd Layer	2.7.11	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	225
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-48
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-43
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-35
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-29
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-29
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-28
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-28
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-27
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-27
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-26
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-24
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-23
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-23
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-23
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-23
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	8e-23
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	8e-23
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-22
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-22
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-22
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-22
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-21
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-21
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	6e-21
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	8e-21
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	9e-21
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-20
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-20
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-20
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-20
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	9e-20
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-19
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-19
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-19
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-19
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-19
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-18
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-18
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-18
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-18
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-18
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	7e-18
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	9e-18
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-17
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-17
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-17
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-17
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	6e-17
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	8e-17
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	8e-17
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-17
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-16
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-16
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-16
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-16
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-16
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-16
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-16
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-16
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	7e-16
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	8e-16
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-15
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-15
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-15
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-15
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-15
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-15
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	3e-15
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-15
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	4e-15
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-15
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	4e-15
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-15
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	5e-15
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-15
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	7e-15
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	9e-15
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-14
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-14
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-14
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-14
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-14
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-14
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-14
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-14
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-14
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-14
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	6e-14
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	8e-14
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	8e-14
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	9e-14
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-13
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-13
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	1e-13
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-13
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-13
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-13
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-13
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-13
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-13
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	8e-13
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-12
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-12
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-12
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	4e-12
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-12
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	7e-12
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-11
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-11
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-11
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-11
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-11
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-11
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-11
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	4e-11
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	4e-11
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-11
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-11
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	5e-11
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	6e-11
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	6e-11
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	8e-11
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	9e-11
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-10
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-10
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-10
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-10
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-10
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-10
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-10
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	5e-10
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-10
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-10
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	9e-10
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-09
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-09
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-09
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-09
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-09
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-09
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-09
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-09
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-09
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-09
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-09
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	6e-09
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	8e-09
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	8e-09
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-08
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-08
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-08
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-08
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-08
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-08
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-08
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	5e-08
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-08
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	5e-08
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	8e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-07
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-07
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-07
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-07
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-07
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	6e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	8e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-06
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	1e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-06
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-06
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-06
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-06
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-06
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	6e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	9e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	9e-06
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	8e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	9e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	1e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	5e-04
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	5e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	6e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	6e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	7e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	7e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	9e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.001
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.001
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.002
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.002
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	0.003
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.003
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  159 bits (405), Expect = 1e-48
 Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I HRDLK EN LLD      +K+ DFG ++      +  + VGTP Y+APEVL  K Y
Sbjct: 116 KGIVHRDLKPENILLDED--GHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGY 173

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-RVSLECRH 119
              + D+WS GV LY +L G  PF   +         ++I       P     +S E + 
Sbjct: 174 GKAV-DIWSLGVILYELLTGKPPFPGDDQL---LELFKKIGKPKPPFPPPEWDISPEAKD 229

Query: 120 LLSRIFVADPEKRITIPEIQKHPWF 144
           L+ ++ V DPEKR+T  E  +HP+F
Sbjct: 230 LIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  145 bits (368), Expect = 4e-43
 Identities = 62/145 (42%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LLD  +   +KI DFG +K  +  S   +T VGTP Y+APEVL      
Sbjct: 119 IIHRDLKPENILLD--ENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGY 176

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRVSLECRH 119
           G   DVWS GV LY +L G  PF   E+  +    I+RIL   + +  P +   S E + 
Sbjct: 177 GPKVDVWSLGVILYELLTGKPPFSG-ENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD 235

Query: 120 LLSRIFVADPEKRITIPEIQKHPWF 144
           L+ +    DP KR T  EI +HPWF
Sbjct: 236 LIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  125 bits (317), Expect = 2e-35
 Identities = 59/146 (40%), Positives = 76/146 (52%), Gaps = 13/146 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLK EN LLD      +K+ DFG +K      S+  +  GTP Y+APEVL  K Y 
Sbjct: 114 IIYRDLKPENILLDADG--HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGY- 170

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D WS GV LY ML G  PF       + K   ++IL      P +  +S E R L+
Sbjct: 171 GKAVDWWSLGVLLYEMLTGKPPFYAE----DRKEIYEKILKDPLRFPEF--LSPEARDLI 224

Query: 122 SRIFVADPEKRIT---IPEIQKHPWF 144
           S +   DP KR+      EI+ HP+F
Sbjct: 225 SGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  110 bits (278), Expect = 1e-29
 Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 9/147 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
             I HRD+K  N L+D      +K+ DFG +K            S  GTP ++APEV+  
Sbjct: 120 NGIVHRDIKGANILVDSDG--VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG 177

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           +EY    AD+WS G T+  M  G  P+ +  +P      I         IP    +S E 
Sbjct: 178 EEYGRA-ADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPE-IP--EHLSEEA 233

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWF 144
           +  L +    DP+KR T  E+ +HP+ 
Sbjct: 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  109 bits (275), Expect = 5e-29
 Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 20/151 (13%)

Query: 1   MQICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I +RDLK EN LLD  G     +KI DFG++K   +  +  +  GTP Y+APE++  K
Sbjct: 120 LDIVYRDLKPENLLLDSDGY----IKITDFGFAK--RVKGRTYTLCGTPEYLAPEIILSK 173

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y GK  D W+ G+ +Y ML G  PF D ++P       ++IL      P +   S + +
Sbjct: 174 GY-GKAVDWWALGILIYEMLAGYPPFFD-DNPIQ---IYEKILEGKVRFPSF--FSPDAK 226

Query: 119 HLLSRIFVADPEKRI-----TIPEIQKHPWF 144
            L+  +   D  KR+      + +I+ HPWF
Sbjct: 227 DLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  107 bits (270), Expect = 2e-28
 Identities = 63/154 (40%), Positives = 79/154 (51%), Gaps = 19/154 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---------SSVLHSQPKSTVGTPAYIAPE 53
           I HRDLK +N L+D      LK+ DFG SK          +    + K  VGTP YIAPE
Sbjct: 114 IIHRDLKPDNILID--SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPE 171

Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRV 113
           V+  + +  K  D WS G  LY  LVG  PF   E P       Q IL+     P  V V
Sbjct: 172 VILGQGH-SKTVDWWSLGCILYEFLVGIPPFHG-ETPE---EIFQNILNGKIEWPEDVEV 226

Query: 114 SLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
           S E   L+S++ V DPEKR+   +I EI+ HP+F
Sbjct: 227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFF 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  105 bits (264), Expect = 4e-28
 Identities = 49/141 (34%), Positives = 65/141 (46%), Gaps = 39/141 (27%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LLD     ++K+ DFG SK  +   S  K+ VGTPAY+APEVL  K Y 
Sbjct: 113 IIHRDLKPENILLDSDN-GKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYY 171

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            + +D+WS GV LY +                                      E + L+
Sbjct: 172 SEKSDIWSLGVILYEL-------------------------------------PELKDLI 194

Query: 122 SRIFVADPEKRITIPEIQKHP 142
            ++   DPEKR +  EI +H 
Sbjct: 195 RKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  104 bits (262), Expect = 2e-27
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 12/146 (8%)

Query: 1   MQICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HRD+K  N LL  DG     +K+ DFG S          + VGTP ++APEV++ K
Sbjct: 117 NGIIHRDIKAANILLTSDGE----VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGK 172

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVSLEC 117
            YD K AD+WS G+T   +  G  P+ +    +  FK       +    +    + S E 
Sbjct: 173 PYDYK-ADIWSLGITAIELAEGKPPYSELPPMKALFKIAT----NGPPGLRNPEKWSDEF 227

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  L +    +PEKR T  ++ KHP+
Sbjct: 228 KDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  104 bits (261), Expect = 4e-27
 Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 34/167 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---------------------SSVLHSQPK 41
           I HRDLK EN LLD      +KI DFG +K                           +  
Sbjct: 123 IIHRDLKPENILLDKDM--HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFA 180

Query: 42  STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL 101
           S VGT  Y++PE+L+ K   GK +D+W+ G  +Y ML G  PF       N   T Q+IL
Sbjct: 181 SFVGTAEYVSPELLNEKPA-GKSSDLWALGCIIYQMLTGKPPFRGS----NEYLTFQKIL 235

Query: 102 SVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI----PEIQKHPWF 144
            + YS P       + + L+ ++ V DP+ R+ +     E++ HP+F
Sbjct: 236 KLEYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  101 bits (254), Expect = 3e-26
 Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 15/140 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HRD+K +N  L       +K+ DFG SK   S+V  +  K+ VGTP Y++PE+   K 
Sbjct: 124 ILHRDIKPQNIFLT--SNGLVKLGDFGISKVLSSTVDLA--KTVVGTPYYLSPELCQNKP 179

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPGYVRVSLECR 118
           Y+ K +D+WS G  LY +    +PFE      N      +IL   Y  IP   + S E R
Sbjct: 180 YNYK-SDIWSLGCVLYELCTLKHPFEG----ENLLELALKILKGQYPPIP--SQYSSELR 232

Query: 119 HLLSRIFVADPEKRITIPEI 138
           +L+S +   DPE+R +I +I
Sbjct: 233 NLVSSLLQKDPEERPSIAQI 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 98.1 bits (245), Expect = 3e-24
 Identities = 57/173 (32%), Positives = 73/173 (42%), Gaps = 41/173 (23%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSK--------------------------SSVLHS 38
           HRD+K +N L+D      +K+ DFG  K                              H 
Sbjct: 124 HRDIKPDNILIDADG--HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHK 181

Query: 39  QPK----STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFK 94
           Q +    STVGTP YIAPEVL    Y  +  D WS GV LY ML G  PF         +
Sbjct: 182 QRRVRANSTVGTPDYIAPEVLRGTPYGLE-CDWWSLGVILYEMLYGFPPFYSD----TLQ 236

Query: 95  TTIQRILS--VHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-IPEIQKHPWF 144
            T  +I++       P    VS E   L+ R  + DPE R+    EI+ HP+F
Sbjct: 237 ETYNKIINWKESLRFPPDPPVSPEAIDLICR-LLCDPEDRLGSFEEIKSHPFF 288

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 95.4 bits (237), Expect = 2e-23
 Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 13/145 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +KI DFG  K ++L      T  GTP YIAPE+L  ++Y+
Sbjct: 117 IVYRDLKLDNILLD--TDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYN 174

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHL 120
             + D WS GV LY ML+G  PF   ++   F+       S+    P Y R ++ E + +
Sbjct: 175 TSV-DWWSFGVLLYEMLIGQSPFHGHDEEELFQ-------SIRMDNPCYPRWLTREAKDI 226

Query: 121 LSRIFVADPEKRITIP-EIQKHPWF 144
           L ++FV +PE+R+ +  +I++HP+F
Sbjct: 227 LVKLFVREPERRLGVKGDIRQHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 93.6 bits (233), Expect = 4e-23
 Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 11/148 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLSR 57
           I HRD+K  N  LD +    +K+ DFG +      ++ +  + +S  GTPAY+APEV++ 
Sbjct: 120 IVHRDIKPANIFLDHNGV--IKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITG 177

Query: 58  KEYDGKI--ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
            +  G    AD+WS G  +  M  G  P+ + ++   F+            IP  +++S 
Sbjct: 178 GKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN--EFQIMFHVGAGHKPPIPDSLQLSP 235

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPW 143
           E +  L R   +DP+KR T  E+ +HP+
Sbjct: 236 EGKDFLDRCLESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 94.0 bits (234), Expect = 5e-23
 Identities = 63/162 (38%), Positives = 82/162 (50%), Gaps = 18/162 (11%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +KI DFG  K  +L     ST  GTP YIAPE+LS + Y 
Sbjct: 117 IIYRDLKLDNVLLDSEG--HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPY- 173

Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-DPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           G   D W+ GV LY ML G  PFE D ED        Q IL      P    +S E + +
Sbjct: 174 GPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELFQSILEDEVRYP--RWLSKEAKSI 226

Query: 121 LSRIFVADPEKRITIP-----EIQKHPWFLKNLPIEFMEEDE 157
           L      +PEKR+        +I+ HP+F + +  + +E  E
Sbjct: 227 LKSFLTKNPEKRLGCLPTGEQDIKGHPFF-REIDWDKLERKE 267

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 94.4 bits (235), Expect = 5e-23
 Identities = 59/156 (37%), Positives = 85/156 (54%), Gaps = 18/156 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +   HRDLK EN L+D S    +K+ DFG SK  V  +   S VG+P Y+APEVL  K Y
Sbjct: 120 LGYIHRDLKPENFLIDASG--HIKLTDFGLSKGIV--TYANSVVGSPDYMAPEVLRGKGY 175

Query: 61  DGKIADVWSCGVTLYVMLVGAYPF------EDPEDPRNFKTTIQRILSVHYSIPGYVRVS 114
           D  + D WS G  LY  L G  PF      E  E+ + +K T+QR     Y  P +  +S
Sbjct: 176 DFTV-DYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR---PVYDDPRF-NLS 230

Query: 115 LECRHLLSRIFVADPEKRI-TIPEIQKHPWFLKNLP 149
            E   L++++ + DP +R  ++ +I+ HP+F K + 
Sbjct: 231 DEAWDLITKL-INDPSRRFGSLEDIKNHPFF-KEVD 264

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 93.9 bits (233), Expect = 8e-23
 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 13/145 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K +V      ST  GTP YIAPE+L   +Y 
Sbjct: 117 IIYRDLKLDNVMLDRDG--HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYT 174

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHL 120
             + D WS GV LY ML+G  PF   ++   F+       S+    P Y R ++ E + +
Sbjct: 175 FSV-DWWSFGVLLYEMLIGQSPFHGDDEDELFE-------SIRVDTPHYPRWITKESKDI 226

Query: 121 LSRIFVADPEKRITIP-EIQKHPWF 144
           L ++F  DP +R+ +   I+ HP+F
Sbjct: 227 LEKLFERDPTRRLGVVGNIRGHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 93.7 bits (233), Expect = 8e-23
 Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 13/145 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD  K   +KI DFG  K ++      ST  GTP YIAPE+L  ++Y+
Sbjct: 117 IIYRDLKLDNVLLD--KDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYN 174

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHL 120
             + D WS GV LY ML+G  PF   ++   F        S+    P + R +S E +  
Sbjct: 175 ESV-DWWSFGVLLYEMLIGQSPFHGEDEDELFD-------SILNDRPHFPRWISKEAKDC 226

Query: 121 LSRIFVADPEKRITIP-EIQKHPWF 144
           LS++F  DP KR+ +  +I++HP+F
Sbjct: 227 LSKLFERDPTKRLGVDGDIRQHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 92.3 bits (230), Expect = 1e-22
 Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 16/151 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
            I +RDLK EN LLD      +K+ DFG++K      +  +  GTP Y+APE++  K YD
Sbjct: 113 GIIYRDLKPENLLLD--SNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYD 170

Query: 62  GKIADVWSCGVTLYVMLVGAYPF-EDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECR 118
               D WS G+ LY +L G  PF ED EDP   +     IL  +  +  P Y  +    +
Sbjct: 171 -FSVDYWSLGILLYELLTGRPPFGEDDEDP--ME-IYNDILKGNGKLEFPNY--IDKAAK 224

Query: 119 HLLSRIFVADPEKRI-----TIPEIQKHPWF 144
            L+ ++   +PE+R+      I +I+KH WF
Sbjct: 225 DLIKQLLRRNPEERLGNLKGGIKDIKKHKWF 255

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 94.4 bits (233), Expect = 1e-22
 Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 17/160 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK-------SSVLHSQPKSTVGTPAYIAPE 53
             I HRD+K EN LLD      +K+ DFG +K       +S + + P ++VGTP Y+APE
Sbjct: 120 KGIIHRDIKPENILLD-RDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE 178

Query: 54  VLS--RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV-------H 104
           VL      Y    +D+WS G+TLY +L G  PFE  ++      T++ IL +        
Sbjct: 179 VLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238

Query: 105 YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            S      +S     LL ++   DP+ R++      H   
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL 278

Length = 384

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 91.2 bits (227), Expect = 3e-22
 Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 10/147 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I HRD+K +N LLD  +   + I DF  +      +   ST GTP Y+APEVL R+ Y
Sbjct: 119 KGIIHRDIKPDNILLD--EQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGY 176

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFE-DPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
                D WS GVT Y  L G  P+       R+     Q    V Y    +   S E   
Sbjct: 177 -SVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYP-ATW---STEAID 231

Query: 120 LLSRIFVADPEKRI--TIPEIQKHPWF 144
            ++++   DP+KR+   + +++ HP+F
Sbjct: 232 AINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 90.6 bits (225), Expect = 4e-22
 Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRD+K EN L+D  +   LK+ DFG S++ +     K  VGTP Y+APE +     D 
Sbjct: 118 IIHRDIKPENLLID--QTGHLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGVG-DD 171

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL--ECRHL 120
           K++D WS G  ++  L G  PF   E P         ILS   + P  V+     E   L
Sbjct: 172 KMSDWWSLGCVIFEFLFGYPPFH-AETP---DAVFDNILSRRINWPEEVKEFCSPEAVDL 227

Query: 121 LSRIFVADPEKRI---TIPEIQKHPWF 144
           ++R+   DP KR+      EI+ HP+F
Sbjct: 228 INRLLCMDPAKRLGANGYQEIKSHPFF 254

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 89.8 bits (223), Expect = 2e-21
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEY 60
           I +RD+KLEN LLD      + + DFG SK  +   + +  S  GT  Y+APEV+     
Sbjct: 126 IIYRDIKLENILLDSEG--HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSG 183

Query: 61  D-GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTI-QRILSVHYSIPGYVRVSLECR 118
              K  D WS GV  + +L GA PF   +  +N ++ I +RIL      P    +S E R
Sbjct: 184 GHDKAVDWWSLGVLTFELLTGASPFT-VDGEQNSQSEISRRILKSKPPFPK--TMSAEAR 240

Query: 119 HLLSRIFVADPEKRI---TIPEIQKHPWF 144
             + ++   DP+KR+      EI+ HP+F
Sbjct: 241 DFIQKLLEKDPKKRLGANGADEIKNHPFF 269

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 90.2 bits (224), Expect = 2e-21
 Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLK EN LLD      +K+ DFG SK S+ H  +  S  GT  Y+APEV++R+ + 
Sbjct: 119 IIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 176

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            + AD WS GV ++ ML G+ PF+     ++ K T+  IL     +P +  +S E + LL
Sbjct: 177 -QSADWWSFGVLMFEMLTGSLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQSLL 229

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
             +F  +P  R+      + EI++HP+F
Sbjct: 230 RALFKRNPANRLGAGPDGVEEIKRHPFF 257

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 88.7 bits (220), Expect = 6e-21
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 15/149 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           + +RDLKLEN +LD  K   +KI DFG  K  +       T  GTP Y+APEVL   +Y 
Sbjct: 116 VVYRDLKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 172

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  + F    + IL      P    +S E + LL
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLSPEAKSLL 226

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        EI +H +F 
Sbjct: 227 AGLLKKDPKQRLGGGPEDAKEIMEHRFFA 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 88.6 bits (220), Expect = 8e-21
 Identities = 58/188 (30%), Positives = 79/188 (42%), Gaps = 60/188 (31%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSK---------------------SSVLHSQPK-- 41
           HRD+K +N LLD      +K+ DFG                             S+P   
Sbjct: 124 HRDIKPDNLLLDAKG--HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSS 181

Query: 42  ----------------STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPF- 84
                           STVGTP YIAPEV  +  Y  K  D WS GV +Y MLVG  PF 
Sbjct: 182 KRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGY-NKECDWWSLGVIMYEMLVGYPPFC 240

Query: 85  -EDPEDP----RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIP--- 136
            ++P++      N+K T+Q         P  V +S E + L+ R    + E+R+      
Sbjct: 241 SDNPQETYRKIINWKETLQ--------FPDEVPLSPEAKDLIKR-LCCEAERRLGNNGVN 291

Query: 137 EIQKHPWF 144
           EI+ HP+F
Sbjct: 292 EIKSHPFF 299

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 88.5 bits (219), Expect = 9e-21
 Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 13/150 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEY 60
           I +RD+KLEN LLD      + + DFG SK  +   + +  S  GT  Y+APE++  K  
Sbjct: 126 IVYRDIKLENILLDSEG--HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGG 183

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTI-QRILSVHYSIPGYVRVSLECRH 119
            GK  D WS G+ ++ +L GA PF   E  RN ++ + +RIL      P    +  E + 
Sbjct: 184 HGKAVDWWSLGILIFELLTGASPFT-LEGERNTQSEVSRRILKCDPPFPS--FIGPEAQD 240

Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LL ++   DP+KR+        EI++HP+F
Sbjct: 241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFF 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 37/176 (21%)

Query: 1   MQICHRDLKLENTLLDGS-----------------KAPRLKICDFGYSKSSVLHSQP--- 40
           + I +RDLK EN LL  S                   P  K    G  +SSV        
Sbjct: 122 LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETF 181

Query: 41  --------KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN 92
                    S VGT  YIAPEV+S   +   + D W+ G+ LY ML G  PF+      N
Sbjct: 182 SEEPSFRSNSFVGTEEYIAPEVISGDGHGSAV-DWWTLGILLYEMLYGTTPFKG----SN 236

Query: 93  FKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI----TIPEIQKHPWF 144
              T   IL    + PG   VS   R L+ ++ V DP KR+       EI++HP+F
Sbjct: 237 RDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 85.8 bits (213), Expect = 3e-20
 Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 11/144 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
             + HRDLK  N  LD +    +K+ DFG +K     S    T VGTP Y++PE L+   
Sbjct: 129 NTVLHRDLKPANIFLDANNN--VKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMS 186

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPGYVRVSLECR 118
           YD K +D+WS G  +Y +   + PF      RN      +I    +  IP   R S E  
Sbjct: 187 YDEK-SDIWSLGCLIYELCALSPPFT----ARNQLQLASKIKEGKFRRIPY--RYSSELN 239

Query: 119 HLLSRIFVADPEKRITIPEIQKHP 142
            ++  +   DP+KR +  E+ + P
Sbjct: 240 EVIKSMLNVDPDKRPSTEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 85.7 bits (212), Expect = 3e-20
 Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 7/141 (4%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
            I HRDLK +N LLD  K   +KI DFG SK     S+  + VGTP YI+PE+   K Y+
Sbjct: 121 LILHRDLKTQNILLDKHKMV-VKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYN 179

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K +D+W+ G  LY +      FE      N    + +I+S  ++ P   R S + R L+
Sbjct: 180 QK-SDIWALGCVLYELASLKRAFE----AANLPALVLKIMSGTFA-PISDRYSPDLRQLI 233

Query: 122 SRIFVADPEKRITIPEIQKHP 142
             +   DP KR  + +I   P
Sbjct: 234 LSMLNLDPSKRPQLSQIMAQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 84.9 bits (210), Expect = 8e-20
 Identities = 50/147 (34%), Positives = 71/147 (48%), Gaps = 10/147 (6%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I +RDLK EN LLD     R  I D G +       + K   GTP Y+APEVL  + YD 
Sbjct: 116 IVYRDLKPENVLLDDHGNVR--ISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDF 173

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D ++ G TLY M+ G  PF   ++    +   +R L +    P   + S E + L  
Sbjct: 174 S-VDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPD--KFSPEAKDLCE 230

Query: 123 RIFVADPEKRI-----TIPEIQKHPWF 144
            +   DPEKR+     +  E+++HP F
Sbjct: 231 ALLQKDPEKRLGCRGGSADEVREHPLF 257

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 85.2 bits (211), Expect = 9e-20
 Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLK EN LLD      +K+ DFG  K S+       T  GT  Y+APE+L R  + 
Sbjct: 121 IIYRDLKPENILLD--AQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGH- 177

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D WS G  +Y ML GA PF       N K TI +IL    ++P Y  ++ E R LL
Sbjct: 178 GKAVDWWSLGALMYDMLTGAPPFT----AENRKKTIDKILKGKLNLPPY--LTPEARDLL 231

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
            ++   +P  R+        E+Q HP+F
Sbjct: 232 KKLLKRNPSSRLGAGPGDAAEVQSHPFF 259

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 14/147 (9%)

Query: 5   HRDLKLENTLL--DGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           HRD+K +N LL  DGS    +K+ DFG++ + +   S+  S VGTP ++APEV+ RK+Y 
Sbjct: 139 HRDIKSDNILLSKDGS----VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYG 194

Query: 62  GKIADVWSCGVTLYVMLVGAYP-FEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            K+ D+WS G+    M  G  P   +P     F  T + I  +        + S E +  
Sbjct: 195 PKV-DIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP----EKWSPEFKDF 249

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKN 147
           L++  V DPEKR +  E+ +HP FLK 
Sbjct: 250 LNKCLVKDPEKRPSAEELLQHP-FLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 85.2 bits (211), Expect = 1e-19
 Identities = 55/150 (36%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD      L   DFG  K  + HS+  ST  GTP Y+APEVL ++ 
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLT--DFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQP 172

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           YD +  D W  G  LY ML G  PF      R+       IL+    +     +S+  RH
Sbjct: 173 YD-RTVDWWCLGAVLYEMLYGLPPFYS----RDTAEMYDNILNKPLRLKP--NISVSARH 225

Query: 120 LLSRIFVADPEKRI----TIPEIQKHPWFL 145
           LL  +   D  KR+       EI+ H +F 
Sbjct: 226 LLEGLLQKDRTKRLGAKDDFLEIKNHVFFS 255

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 84.4 bits (209), Expect = 1e-19
 Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 11/147 (7%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + KS VGTP ++APEV+SR  
Sbjct: 136 VIHRDIKSDSILLTSDG----RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP 191

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y G   D+WS G+ +  M+ G  P+ + E P      I+  L          +VS   R 
Sbjct: 192 Y-GTEVDIWSLGIMVIEMVDGEPPYFN-EPPLQAMKRIRDNLPPKLKNL--HKVSPRLRS 247

Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLK 146
            L R+ V DP +R T  E+  HP+  K
Sbjct: 248 FLDRMLVRDPAQRATAAELLNHPFLAK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 83.8 bits (207), Expect = 3e-19
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 13/150 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
             + +RDLK EN LLD      + +CDFG  K ++      +T  GTP Y+APE+L    
Sbjct: 112 FNVIYRDLKPENILLD--YQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHG 169

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y  K  D W+ GV LY ML G  PF D      ++  +Q  L      P       + + 
Sbjct: 170 YT-KAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL----RFPDGFDR--DAKD 222

Query: 120 LLSRIFVADPEKRITI---PEIQKHPWFLK 146
           LL  +   DP +R+      EI+ HP+F +
Sbjct: 223 LLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 82.3 bits (204), Expect = 5e-19
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 11/144 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           + HRD+K  N L   +K   +K+ DFG + K + +     S VGTP ++APEV+      
Sbjct: 120 VIHRDIKAANILT--TKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGAS 177

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHL 120
              +D+WS G T+  +L G  P+ D     N    + RI+   H  +P    +S E +  
Sbjct: 178 TA-SDIWSLGCTVIELLTGNPPYYD----LNPMAALFRIVQDDHPPLPE--GISPELKDF 230

Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           L + F  DP  R T  ++ KHPW 
Sbjct: 231 LMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 81.5 bits (202), Expect = 1e-18
 Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 7/143 (4%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I HRD+K  N L+  +    +KI DFG SK         +T VGT  Y++PE + + E  
Sbjct: 121 IIHRDIKPSNLLI--NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERI-QGESY 177

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH-YSIPGYVRVSLECRHL 120
              AD+WS G+TL    +G +PF  P  P +F   +Q I      S+P     S E R  
Sbjct: 178 SYAADIWSLGLTLLECALGKFPFLPPGQP-SFFELMQAICDGPPPSLP-AEEFSPEFRDF 235

Query: 121 LSRIFVADPEKRITIPEIQKHPW 143
           +S     DP+KR +  E+ +HP+
Sbjct: 236 ISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 19/150 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +KI DFG  K  +      ST  GTP ++APEVL+   Y 
Sbjct: 122 IVYRDLKLDNLLLDTEG--FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSY- 178

Query: 62  GKIADVWSCGVTLYVMLVGAYPF--EDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
            +  D W  GV +Y MLVG  PF  +D E+          I++     P +  +S E   
Sbjct: 179 TRAVDWWGLGVLIYEMLVGESPFPGDDEEE------VFDSIVNDEVRYPRF--LSREAIS 230

Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           ++ R+   +PE+R+        +++K P+F
Sbjct: 231 IMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 82.0 bits (202), Expect = 2e-18
 Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 16/149 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I +RDLK EN LLD  K   +K+ DFG++K  V+ ++  +  GTP YIAPE+L    +
Sbjct: 150 LNIVYRDLKPENLLLD--KDGFIKMTDFGFAK--VVDTRTYTLCGTPEYIAPEILLNVGH 205

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            GK AD W+ G+ +Y +LVG  PF   E    +    Q+IL      P ++  +  C+HL
Sbjct: 206 -GKAADWWTLGIFIYEILVGCPPFYANEPLLIY----QKILEGIIYFPKFLDNN--CKHL 258

Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           + ++   D  KR          +++HPWF
Sbjct: 259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287

Length = 340

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 81.4 bits (201), Expect = 3e-18
 Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 16/147 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I +RDLK EN LLD      +K+ DFG++K   +  +  +  GTP Y+APEV+  K + G
Sbjct: 139 IIYRDLKPENLLLDNKG--HVKVTDFGFAKK--VPDRTFTLCGTPEYLAPEVIQSKGH-G 193

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           K  D W+ GV LY  + G  PF D + P  F+   ++IL+     P +       R L+ 
Sbjct: 194 KAVDWWTMGVLLYEFIAGYPPFFD-DTP--FR-IYEKILAGRLKFPNW--FDGRARDLVK 247

Query: 123 RIFVADPEKRI-TIP----EIQKHPWF 144
            +   D  KR+ T+     +++ HP+F
Sbjct: 248 GLLQTDHTKRLGTLKGGVADVKNHPYF 274

Length = 329

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 25/156 (16%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++ S+  ++K+CDFG S   V +S  K+ VGT +Y+APE +   +Y 
Sbjct: 121 KIIHRDVKPSNILVN-SRG-QIKLCDFGVSGQLV-NSLAKTFVGTSSYMAPERIQGNDYS 177

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTI----QRI-------LSVHYSIPGY 110
            K +D+WS G++L  +  G +P+    DP      I    Q I       L         
Sbjct: 178 VK-SDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEPPPRLPSG------ 227

Query: 111 VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
            + S + +  ++   + DP +R +  E+ +HP+  K
Sbjct: 228 -KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 80.1 bits (197), Expect = 7e-18
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 15/149 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEY 60
           +I +RDLKLEN +LD  K   +KI DFG  K  +  +   K+  GTP Y+APEVL   +Y
Sbjct: 115 KIVYRDLKLENLMLD--KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDY 172

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+  D W  GV +Y M+ G  PF + +  + F+  +   +    ++      S + + L
Sbjct: 173 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTL------SADAKSL 225

Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LS + + DP KR+        EI +H +F
Sbjct: 226 LSGLLIKDPNKRLGGGPDDAKEIMRHSFF 254

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 79.9 bits (197), Expect = 9e-18
 Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 16/153 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           M   HRD+K EN L+D  +   +K+ DFG +   ++      K  VGTP YIAPEVL+  
Sbjct: 121 MGYVHRDIKPENVLID--RTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTM 178

Query: 59  EYDGKIA-----DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
             DGK       D WS GV  Y M+ G  PF   E       T   I++    +  P   
Sbjct: 179 NGDGKGTYGVECDWWSLGVIAYEMIYGRSPFH--EG--TSAKTYNNIMNFQRFLKFPEDP 234

Query: 112 RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +VS +   L+  + +   ++R+    +  HP+F
Sbjct: 235 KVSSDFLDLIQSL-LCGQKERLGYEGLCCHPFF 266

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 79.0 bits (195), Expect = 1e-17
 Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 16/148 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I +RDLK EN LLD  K   +K+ DFG++K   L  +  +  GTP Y+APEV+  K + 
Sbjct: 121 EIVYRDLKPENILLD--KEGHIKLTDFGFAKK--LRDRTWTLCGTPEYLAPEVIQSKGH- 175

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K  D W+ G+ +Y MLVG  PF D     N     ++IL+     P +  + L  + L+
Sbjct: 176 NKAVDWWALGILIYEMLVGYPPFFD----DNPFGIYEKILAGKLEFPRH--LDLYAKDLI 229

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
            ++ V D  +R+        +++ H WF
Sbjct: 230 KKLLVVDRTRRLGNMKNGADDVKNHRWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 78.6 bits (194), Expect = 1e-17
 Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 17/146 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKE 59
            +I HRDLK  N LL       +KI D G SK  VL     K+ +GTP Y+APEV   + 
Sbjct: 122 QKILHRDLKSANILL--VANDLVKIGDLGISK--VLKKNMAKTQIGTPHYMAPEVWKGRP 177

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFE--DPEDPRNFKTTIQRILSVHYS-IPGYVRVSLE 116
           Y  K +D+WS G  LY M   A PFE    +D R       ++    Y  IP     S +
Sbjct: 178 YSYK-SDIWSLGCLLYEMATFAPPFEARSMQDLR------YKVQRGKYPPIPP--IYSQD 228

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHP 142
            ++ +  +    P+ R    +I   P
Sbjct: 229 LQNFIRSMLQVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 79.4 bits (196), Expect = 2e-17
 Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 21/156 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           M   HRD+K +N LLD  K+  LK+ DFG       + ++     + VGTP YI+PEVL 
Sbjct: 161 MGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMDANGMVRCD--TAVGTPDYISPEVLK 216

Query: 57  RKEYD---GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
            +  D   G+  D WS GV LY MLVG  PF       +   T  +I+    S+  P  +
Sbjct: 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA----DSLVGTYSKIMDHKNSLTFPDDI 272

Query: 112 RVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            +S + + L+   F+ D E R+    + EI+ HP+F
Sbjct: 273 EISKQAKDLI-CAFLTDREVRLGRNGVDEIKSHPFF 307

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 77.1 bits (190), Expect = 5e-17
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 10/142 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
             HRD+K  N L+D +    +K+ DFG +K  V  S  KS  G+P ++APEV++++   G
Sbjct: 123 TVHRDIKGANILVDTNGV--VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYG 180

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRVSLECRHL 120
             AD+WS G T+  M  G  P+   E        + +I        IP +  +S E +  
Sbjct: 181 LAADIWSLGCTVLEMATGKPPWSQLE----GVAAVFKIGRSKELPPIPDH--LSDEAKDF 234

Query: 121 LSRIFVADPEKRITIPEIQKHP 142
           + +    DP  R T  E+ +HP
Sbjct: 235 ILKCLQRDPSLRPTAAELLEHP 256

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 77.5 bits (191), Expect = 6e-17
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K ++   +   T  GTP YIAPE+++ + Y 
Sbjct: 122 IIYRDLKLDNVMLDAEG--HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPY- 178

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PF+  ++   F++ ++  +S   S+     VS+ C+ LL
Sbjct: 179 GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA-VSI-CKGLL 236

Query: 122 SRIFVADPEKRITI-----PEIQKHPWF 144
           ++     P KR+        +I++H +F
Sbjct: 237 TK----HPAKRLGCGPTGERDIREHAFF 260

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 76.7 bits (189), Expect = 8e-17
 Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 23/150 (15%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSR-KEY 60
           + HRD+K  N L+  +    +K+CDFG +     +S  +ST VGTP ++APEV++  K Y
Sbjct: 122 VIHRDIKAANILV--TNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY 179

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D K AD+WS G+T+Y M  G  P+ D +  R               IP      LE    
Sbjct: 180 DTK-ADIWSLGITIYEMATGNPPYSDVDAFR-----------AMMLIPKSKPPRLEDNGY 227

Query: 121 --LSRIFVA-----DPEKRITIPEIQKHPW 143
             L R FVA     +P++R++  E+ K  W
Sbjct: 228 SKLLREFVAACLDEEPKERLSAEELLKSKW 257

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 77.2 bits (190), Expect = 8e-17
 Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 19/153 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           + +RDLKL+N LLD       K+ DFG  K  +L+    +T  GTP YIAPE+L   EY 
Sbjct: 117 VIYRDLKLDNILLDAEG--HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYG 174

Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-DPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             + D W+ GV +Y M+ G  PFE D ED        + IL  H  +   V +S E   +
Sbjct: 175 PSV-DWWALGVLMYEMMAGQPPFEADNED-----DLFESIL--HDDVLYPVWLSKEAVSI 226

Query: 121 LSRIFVADPEKRI-------TIPEIQKHPWFLK 146
           L      +P KR+           I++HP+F +
Sbjct: 227 LKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 76.3 bits (188), Expect = 8e-17
 Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 13/143 (9%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HRD+K  N  L  +KA  +K+ DFG SK   S    ++  + VGTP Y++PE+    +
Sbjct: 122 ILHRDIKTLNIFL--TKAGLIKLGDFGISKILGSEYSMAE--TVVGTPYYMSPELCQGVK 177

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+ K +D+W+ G  LY +L     F    D  N    + +I+  +Y+ P     S E   
Sbjct: 178 YNFK-SDIWALGCVLYELLTLKRTF----DATNPLNLVVKIVQGNYT-PVVSVYSSELIS 231

Query: 120 LLSRIFVADPEKRITIPEIQKHP 142
           L+  +   DPEKR T  E+   P
Sbjct: 232 LVHSLLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 76.0 bits (187), Expect = 1e-16
 Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 13/144 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRK 58
           +I HRD+K +N  L  +K   +K+ DFG ++  VL+S     ++ +GTP Y++PE+   +
Sbjct: 121 KILHRDIKSQNIFL--TKDGTIKLGDFGIAR--VLNSTVELARTCIGTPYYLSPEICENR 176

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y+ K +D+W+ G  LY M    + FE      N K  + +I+   Y  P     S + R
Sbjct: 177 PYNNK-SDIWALGCVLYEMCTLKHAFE----AGNMKNLVLKIIRGSYP-PVSSHYSYDLR 230

Query: 119 HLLSRIFVADPEKRITIPEIQKHP 142
           +L+S++F  +P  R ++  I +  
Sbjct: 231 NLVSQLFKRNPRDRPSVNSILEKN 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 77.0 bits (189), Expect = 1e-16
 Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEY 60
            + +RDLKLEN +LD  K   +KI DFG  K  +   +  K+  GTP Y+APEVL   +Y
Sbjct: 116 NVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 173

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+  D W  GV +Y M+ G  PF + +  + F    + IL      P    +S E + L
Sbjct: 174 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLSPEAKSL 226

Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LS +   DP++R+        EI +H +F
Sbjct: 227 LSGLLKKDPKQRLGGGPDDAKEIMQHKFF 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 76.4 bits (188), Expect = 1e-16
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 15/151 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I +RDLK EN LLD      ++I D G + +     S+ K   GTP ++APE+L  +EY
Sbjct: 117 RIIYRDLKPENVLLD--NDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEY 174

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL--SVHYSIPGYVRVSLECR 118
           D  + D ++ GVTLY M+    PF    +    K   QRIL  SV Y      + S   +
Sbjct: 175 DFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYP----DKFSPASK 229

Query: 119 HLLSRIFVADPEKRI-----TIPEIQKHPWF 144
                +   DPEKR+         ++ HP F
Sbjct: 230 SFCEALLAKDPEKRLGFRDGNCDGLRTHPLF 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 77.2 bits (190), Expect = 1e-16
 Identities = 58/191 (30%), Positives = 77/191 (40%), Gaps = 53/191 (27%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG-------------YSK--------------- 32
           M   HRD+K +N L+D  +   +K+ DFG             Y K               
Sbjct: 120 MGFIHRDIKPDNILID--RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW 177

Query: 33  SSVLHSQPK----------------STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV 76
           S +   + K                S VGTP YIAPEVL R  Y  ++ D WS GV LY 
Sbjct: 178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYE 236

Query: 77  MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI--- 133
           MLVG  PF            I    ++H  IP   ++S E   L+ R+     E R+   
Sbjct: 237 MLVGQPPFLADTPAETQLKVINWETTLH--IPSQAKLSREASDLILRL-CCGAEDRLGKN 293

Query: 134 TIPEIQKHPWF 144
              EI+ HP+F
Sbjct: 294 GADEIKAHPFF 304

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 76.0 bits (187), Expect = 1e-16
 Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 13/148 (8%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQ---PKSTVGTPAYIAPEVLSR 57
            I HRD+K  N L D   A  +K+ DFG SK    + S     KS  GTP +++PEV+S 
Sbjct: 124 MIVHRDIKGANILRD--SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG 181

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVSLE 116
           + Y G+ ADVWS G T+  ML    P+ + E     FK   Q     +  +P    VS +
Sbjct: 182 EGY-GRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ---PTNPQLP--SHVSPD 235

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            R+ L R FV + +KR +  E+ +H + 
Sbjct: 236 ARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 15/149 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K+  GTP Y+APEVL   +Y 
Sbjct: 116 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 172

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F    + IL      P    +S E + LL
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAKSLL 226

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 227 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 75.3 bits (185), Expect = 3e-16
 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
            I HRD+K  N L++G+   ++K+CDFG S  +++ S  K+ +G  +Y+APE +     +
Sbjct: 123 NIIHRDVKPTNVLVNGNG--QVKLCDFGVS-GNLVASLAKTNIGCQSYMAPERIKSGGPN 179

Query: 62  GKI-----ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGY-VRVSL 115
                   +DVWS G+++  M +G YP+  PE   N    +  I  V    P      S 
Sbjct: 180 QNPTYTVQSDVWSLGLSILEMALGRYPYP-PETYANIFAQLSAI--VDGDPPTLPSGYSD 236

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
           + +  +++     P +R T  ++ +HPW +K
Sbjct: 237 DAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 74.7 bits (184), Expect = 3e-16
 Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 9/146 (6%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLS-RK 58
           HRD+K  N LL    +  +KI DFG S S            K+ VGTP ++APEV+    
Sbjct: 125 HRDIKAGNILLGEDGS--VKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVH 182

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            YD K AD+WS G+T   +  GA P+      +    T+Q       +   Y + S   R
Sbjct: 183 GYDFK-ADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFR 241

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWF 144
            ++S     DP KR T  E+ KH +F
Sbjct: 242 KMISLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 74.7 bits (183), Expect = 7e-16
 Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 14/149 (9%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD      + + DFG  K ++ H+   ST  GTP Y+APEVL ++ 
Sbjct: 115 LNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQP 172

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           YD +  D W  G  LY ML G  PF        +   + + L +  +I      +   RH
Sbjct: 173 YD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNI------TNSARH 225

Query: 120 LLSRIFVADPEKRI----TIPEIQKHPWF 144
           LL  +   D  KR+       EI+ H +F
Sbjct: 226 LLEGLLQKDRTKRLGAKDDFMEIKNHIFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 74.7 bits (183), Expect = 8e-16
 Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K ++      K+  GTP YIAPE+++ + Y 
Sbjct: 122 IIYRDLKLDNVMLDSEG--HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPY- 178

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PFE  ++   F    Q I+  + + P    +S E   + 
Sbjct: 179 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF----QSIMEHNVAYPK--SMSKEAVAIC 232

Query: 122 SRIFVADPEKRITI-PE----IQKHPWF 144
             +    P KR+   PE    I++H +F
Sbjct: 233 KGLMTKHPGKRLGCGPEGERDIKEHAFF 260

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 74.3 bits (182), Expect = 1e-15
 Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K  ++      T  GTP YIAPE+++ + Y 
Sbjct: 122 IIYRDLKLDNVMLDSEG--HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPY- 178

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PF+  ++   F++ ++  +S   S+     VS+ C+ L+
Sbjct: 179 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA-VSI-CKGLM 236

Query: 122 SRIFVADPEKRITI-PE----IQKHPWF 144
           ++     P KR+   PE    I++H +F
Sbjct: 237 TKH----PSKRLGCGPEGERDIREHAFF 260

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 46/169 (27%), Positives = 66/169 (39%), Gaps = 31/169 (18%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRDLK EN L++      LK+ DFG ++S    S  +     V T  Y APE+L   +
Sbjct: 119 ILHRDLKPENLLINTEGV--LKLADFGLARS--FGSPVRPYTHYVVTRWYRAPELLLGDK 174

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPED-------------PRNFKTTIQRILSVH 104
                 D+WS G     +L     +P +   D             P  +        +  
Sbjct: 175 GYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234

Query: 105 YSIPGYVRVSLE---------CRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +S P    + L             LLS++   DP KRIT  +   HP+F
Sbjct: 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 73.3 bits (180), Expect = 1e-15
 Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 11/151 (7%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++     ++K+CDFG S   +++S   + VGT  Y++PE +   +Y 
Sbjct: 124 RIMHRDIKPSNILVNS--RGQIKLCDFGVS-GELINSIADTFVGTSTYMSPERIQGGKYT 180

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS-----VHYSIPGY--VRVS 114
            K +DVWS G+++  + +G +PF       + +     IL      V    P        
Sbjct: 181 VK-SDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFP 239

Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFL 145
            + R  +    + DP +R T  ++   P F+
Sbjct: 240 EDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 72.3 bits (178), Expect = 3e-15
 Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 25/152 (16%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEYDGK 63
           HRD+K  N LL  S+   +K+ DFG S   +   S+  + VGTP ++APEV+ +  YD K
Sbjct: 121 HRDIKAANILL--SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEK 178

Query: 64  IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSR 123
            AD+WS G+T   +  G  P  D   P        R+L +   IP     SLE  +  S+
Sbjct: 179 -ADIWSLGITAIELAKGEPPLSD-LHP-------MRVLFL---IPKNNPPSLE-GNKFSK 225

Query: 124 IF--------VADPEKRITIPEIQKHPWFLKN 147
            F          DP++R +  E+ KH  F+K 
Sbjct: 226 PFKDFVSLCLNKDPKERPSAKELLKHK-FIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 72.2 bits (177), Expect = 3e-15
 Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 27/154 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-------SSVLHSQPKSTVGTPAYIAPEVL 55
           I HRD+K  N L+D      +KI DFG SK       S+  +    S  G+  ++APEV+
Sbjct: 127 IIHRDIKGANILVDNKGG--IKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVV 184

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR--- 112
            +  Y  K AD+WS G  +  ML G +PF D        T +Q I    + I        
Sbjct: 185 KQTSYTRK-ADIWSLGCLVVEMLTGKHPFPD-------CTQLQAI----FKIGENASPEI 232

Query: 113 ---VSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
              +S E    L + F  D  KR T  E+ KHP+
Sbjct: 233 PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 72.6 bits (178), Expect = 3e-15
 Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 12/148 (8%)

Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++RK
Sbjct: 135 QVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 190

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P   +       +    +    ++S   R
Sbjct: 191 AYGPKV-DIWSLGIMAIEMVEGEPPYLN-ENP--LRALYLIATNGTPELQNPEKLSAIFR 246

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +HP FLK
Sbjct: 247 DFLNRCLEMDVEKRGSAKELLQHP-FLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 31/165 (18%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----------------QPKSTVGT 46
           I HRDLK +N L+  +    +K+ DFG SK  ++                    K   GT
Sbjct: 122 IVHRDLKPDNLLI--TSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGT 179

Query: 47  PAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPF--EDPEDPRNFKTTIQRILSVH 104
           P YIAPEV+ R+ Y GK  D W+ G+ LY  LVG  PF  + PE+         +++S  
Sbjct: 180 PEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFGQVISDD 232

Query: 105 YSIP-GYVRVSLECRHLLSRIFVADPEKRITIP---EIQKHPWFL 145
              P G   +  + + L+SR+   +P +R+      E+++H +FL
Sbjct: 233 IEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 72.5 bits (178), Expect = 4e-15
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 18/165 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      ST  GTP YIAPE+L  ++Y 
Sbjct: 117 IIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYG 174

Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-----DPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
             + D W+ GV ++ M+ G  PF+     D  D        Q IL     IP    +S++
Sbjct: 175 FSV-DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS--LSVK 231

Query: 117 CRHLLSRIFVADPEKRI------TIPEIQKHPWFLKNLPIEFMEE 155
              +L      DP++R+         +I+ HP+F +N+  + +E+
Sbjct: 232 ASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF-RNIDWDLLEQ 275

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 72.8 bits (178), Expect = 4e-15
 Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 18/167 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      ST  GTP YIAPE+L  ++Y 
Sbjct: 117 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY- 173

Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-----DPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           G   D W+ GV ++ M+ G  PF+     D  D        Q IL     IP    +S++
Sbjct: 174 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVK 231

Query: 117 CRHLLSRIFVADPEKRI-TIPE-----IQKHPWFLKNLPIEFMEEDE 157
              +L      DP++R+   P+     IQ HP+F +N+  + ME+ +
Sbjct: 232 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDLMEQKQ 277

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 72.4 bits (177), Expect = 4e-15
 Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 11/150 (7%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + KS VGTP ++APE++SR  
Sbjct: 137 VIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP 192

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y G   D+WS G+ +  M+ G  P+ + E P      I+  L     +    +VS   + 
Sbjct: 193 Y-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPP--KLKNLHKVSPSLKG 248

Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
            L R+ V DP +R T  E+ KHP+  K  P
Sbjct: 249 FLDRLLVRDPAQRATAAELLKHPFLAKAGP 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 73.1 bits (179), Expect = 4e-15
 Identities = 63/188 (33%), Positives = 88/188 (46%), Gaps = 17/188 (9%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS---SVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           HRDLK  N  L  +    +K+ DFG+SK    SV      S  GTP Y+APE+  RK Y 
Sbjct: 192 HRDLKSANIFLMPTGI--IKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYS 249

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K AD+WS GV LY +L    PF+ P      +  +Q++L   Y  P    VS   + LL
Sbjct: 250 KK-ADMWSLGVILYELLTLHRPFKGPSQ----REIMQQVLYGKYD-PFPCPVSSGMKALL 303

Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE 181
             +   +P  R T  ++  H  FLK +   F +     + +  E       EEIL  +QE
Sbjct: 304 DPLLSKNPALRPTTQQLL-HTEFLKYVANLFQD-----IVRHSETISPHDREEILRQLQE 357

Query: 182 ARKPGEGP 189
           + +    P
Sbjct: 358 SGERAPPP 365

Length = 478

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 71.7 bits (177), Expect = 5e-15
 Identities = 48/176 (27%), Positives = 66/176 (37%), Gaps = 46/176 (26%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEVL-SR 57
           I HRDLK +N L++  +   LK+ DFG +++      P  T    V T  Y APE+L   
Sbjct: 119 ILHRDLKPQNILIN--RDGVLKLADFGLARA---FGIPLRTYTHEVVTLWYRAPEILLGS 173

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFE------------------DPEDPRNFKTTIQR 99
           K Y   + D+WS G     M+ G   F                     E           
Sbjct: 174 KHYSTAV-DIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK---- 228

Query: 100 ILSVHYSI--PGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                Y    P +    L         E   LLS++   +P KRI+  E  KHP+F
Sbjct: 229 --LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 71.7 bits (176), Expect = 5e-15
 Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 18/152 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPE----VL 55
           + + HRD+K  N L++  +  ++K+CDFG S   V  S  K+   G   Y+APE     L
Sbjct: 123 LSVIHRDVKPSNVLIN--RNGQVKLCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPEL 179

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV---R 112
           ++K YD K +DVWS G+T+  +  G +P++      ++KT  Q++  V       +   +
Sbjct: 180 NQKGYDVK-SDVWSLGITMIELATGRFPYD------SWKTPFQQLKQVVEEPSPQLPAEK 232

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            S E +  +++    + ++R   PE+ +HP+F
Sbjct: 233 FSPEFQDFVNKCLKKNYKERPNYPELLQHPFF 264

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 72.2 bits (177), Expect = 5e-15
 Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 16/149 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD       K+ DFG  K  + + +  ST  GTP YIAPE+L    Y 
Sbjct: 117 IIYRDLKLDNVLLD--HEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLY- 173

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   D W+ GV LY ML G  PFE   +   F+     IL+     P +  +S +   +L
Sbjct: 174 GPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILNDEVVYPTW--LSQDAVDIL 227

Query: 122 SRIFVADPEKRITI------PEIQKHPWF 144
                 +P  R+          I +HP+F
Sbjct: 228 KAFMTKNPTMRLGSLTLGGEEAILRHPFF 256

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 71.6 bits (176), Expect = 7e-15
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 19/159 (11%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLSRK-- 58
            + HRD+K  N LLD S    +K+CDFG S   V  S+ K+ + G  AY+APE +     
Sbjct: 135 GVIHRDVKPSNILLDASG--NVKLCDFGISGRLV-DSKAKTRSAGCAAYMAPERIDPPDP 191

Query: 59  --EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKT---TIQRILSVHY-SIPGYVR 112
             +YD + ADVWS G++L  +  G +P+      +N KT    + +IL     S+P    
Sbjct: 192 NPKYDIR-ADVWSLGISLVELATGQFPY------KNCKTEFEVLTKILQEEPPSLPPNEG 244

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
            S +    +      D  KR    E+ +HP+  +    E
Sbjct: 245 FSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAE 283

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 71.2 bits (174), Expect = 9e-15
 Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 16/154 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKE- 59
           I +RD+KLEN LLD +    + + DFG SK        +  S  GT  Y+AP+++   + 
Sbjct: 126 IIYRDIKLENILLDSNG--HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDG 183

Query: 60  -YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLEC 117
            +D K  D WS GV +Y +L GA PF    +  +     +RIL    S P Y + +S   
Sbjct: 184 GHD-KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK---SEPPYPQEMSALA 239

Query: 118 RHLLSRIFVADPEKRI-----TIPEIQKHPWFLK 146
           + ++ R+ + DP+KR+        EI+KHP+F K
Sbjct: 240 KDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 71.6 bits (175), Expect = 1e-14
 Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 21/156 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           M + HRD+K +N LLD  K   LK+ DFG      ++ ++     + VGTP YI+PEVL 
Sbjct: 161 MGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMDETGMVRCD--TAVGTPDYISPEVLK 216

Query: 57  RKE---YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
            +    Y G+  D WS GV L+ MLVG  PF       +   T  +I+    S+  P  V
Sbjct: 217 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY----ADSLVGTYSKIMDHKNSLNFPEDV 272

Query: 112 RVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            +S   ++L+   F+ D E R+    + EI++HP+F
Sbjct: 273 EISKHAKNLIC-AFLTDREVRLGRNGVEEIKQHPFF 307

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 70.6 bits (173), Expect = 1e-14
 Identities = 50/147 (34%), Positives = 83/147 (56%), Gaps = 12/147 (8%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSR--K 58
           QI HRD+K +N L++ + +  +KI DFG SK  + ++   ++  GT  Y+APEV+ +  +
Sbjct: 128 QIVHRDIKGDNVLVN-TYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPR 186

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN--FKTTIQRILSVHYSIPGYVRVSLE 116
            Y G  AD+WS G T+  M  G  PF +  +P+   FK  + +I   H  IP    +S E
Sbjct: 187 GY-GAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKI---HPEIP--ESLSAE 240

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            ++ + R F  DP+KR +  ++ + P+
Sbjct: 241 AKNFILRCFEPDPDKRASAHDLLQDPF 267

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 70.2 bits (172), Expect = 2e-14
 Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 14/142 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEVLS 56
           +I HRD+K  N  +  +    +K+ D G      SK++  HS     VGTP Y++PE + 
Sbjct: 126 RIMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAHSL----VGTPYYMSPERIH 179

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
              Y+ K +D+WS G  LY M     PF    D  N  +  ++I    Y        S E
Sbjct: 180 ENGYNFK-SDIWSLGCLLYEMAALQSPFY--GDKMNLYSLCKKIEKCDYPPLPADHYSEE 236

Query: 117 CRHLLSRIFVADPEKRITIPEI 138
            R L+SR    DPEKR  I  +
Sbjct: 237 LRDLVSRCINPDPEKRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 70.4 bits (172), Expect = 2e-14
 Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 19/151 (12%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + KS VGTP ++APEV+SR  
Sbjct: 138 VIHRDIKSDSILLTLDG----RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP 193

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP----GYVRVSL 115
           Y  ++ D+WS G+ +  M+       D E P    + +Q +  +  S P       ++S 
Sbjct: 194 YGTEV-DIWSLGIMVIEMV-------DGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISP 245

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
             R  L R+   +P++R T  E+  HP+ L+
Sbjct: 246 VLRDFLERMLTREPQERATAQELLDHPFLLQ 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 70.8 bits (173), Expect = 2e-14
 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 14/149 (9%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD      + + DFG  K  +  S   +T  GTP Y+APEV+ ++ 
Sbjct: 115 INIVYRDLKPENILLDSQG--HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQP 172

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           YD  + D W  G  LY ML G  PF   +    +   + + L +    PG    SL    
Sbjct: 173 YDNTV-DWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR---PG---ASLTAWS 225

Query: 120 LLSRIFVADPEKRI----TIPEIQKHPWF 144
           +L  +   D ++R+       EIQ+HP+F
Sbjct: 226 ILEELLEKDRQRRLGAKEDFLEIQEHPFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 45/173 (26%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEV----LS 56
            I HRD+K  N L++ +K   +KI DFG S+       P  S+VGT AY++PE     L+
Sbjct: 188 HIVHRDIKPSNLLINSAK--NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLN 245

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPF------------------EDPEDPRNFKTTIQ 98
              YDG   D+WS GV++    +G +PF                  + PE P        
Sbjct: 246 HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPAT------ 299

Query: 99  RILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
                          S E RH +S     +P KR +  ++ +HP+ L+  P +
Sbjct: 300 --------------ASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQ 338

Length = 353

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 70.8 bits (173), Expect = 2e-14
 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 21/156 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           M   HRD+K +N LLD  K+  LK+ DFG     +K  ++     + VGTP YI+PEVL 
Sbjct: 161 MGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMVRCD--TAVGTPDYISPEVLK 216

Query: 57  RKE---YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
            +    Y G+  D WS GV LY MLVG  PF       +   T  +I++   S+  P   
Sbjct: 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----ADSLVGTYSKIMNHKNSLTFPDDN 272

Query: 112 RVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            +S E ++L+   F+ D E R+    + EI++H +F
Sbjct: 273 DISKEAKNLIC-AFLTDREVRLGRNGVEEIKRHLFF 307

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 12/148 (8%)

Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++RK
Sbjct: 135 QVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 190

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   R+S   R
Sbjct: 191 AYGPKV-DIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPE--RLSAVFR 246

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D ++R +  E+ +HP FLK
Sbjct: 247 DFLNRCLEMDVDRRGSAKELLQHP-FLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 69.5 bits (170), Expect = 3e-14
 Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 16/152 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           QI HRD+K  N L+D S   RL+I DFG   ++ L ++           +GT A++APEV
Sbjct: 123 QIIHRDVKGANLLID-STGQRLRIADFG--AAARLAAKGTGAGEFQGQLLGTIAFMAPEV 179

Query: 55  LSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVR 112
           L  ++Y G+  DVWS G  +  M     P+ + E   N    I +I S     SIP ++ 
Sbjct: 180 LRGEQY-GRSCDVWSVGCVIIEMATAKPPW-NAEKHSNHLALIFKIASATTAPSIPEHLS 237

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             L  R +  R     PE R    E+ KHP F
Sbjct: 238 PGL--RDVTLRCLELQPEDRPPSRELLKHPVF 267

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 70.1 bits (171), Expect = 3e-14
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 15/152 (9%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      ST  GTP YIAPE+L  +EY 
Sbjct: 117 IIYRDLKLDNVLLDADG--HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEY- 173

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTT---IQRILSVHYSIPGYVRVSLECR 118
           G   D W+ GV ++ M+ G  PF+   D  +  T     Q IL     IP +  +S++  
Sbjct: 174 GFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF--LSVKAS 231

Query: 119 HLLSRIFVADPEKRI------TIPEIQKHPWF 144
           H+L      DP++R+         +I+ H +F
Sbjct: 232 HVLKGFLNKDPKERLGCQPQTGFSDIKSHTFF 263

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 70.0 bits (171), Expect = 3e-14
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 22/152 (14%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLK EN LLD +    + +CDFG SK+++  ++  +T  GT  Y+APEVL  ++  
Sbjct: 117 IVYRDLKPENILLDATG--HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGY 174

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-----VSLE 116
            K  D WS GV ++ M  G  PF   +  + ++       ++ +   G VR     +S E
Sbjct: 175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYR-------NIAF---GKVRFPKNVLSDE 224

Query: 117 CRHLLSRIFVADPEKRI----TIPEIQKHPWF 144
            R  +  +   +P+ R+       E+++HP+F
Sbjct: 225 GRQFVKGLLNRNPQHRLGAHRDAVELKEHPFF 256

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 69.2 bits (169), Expect = 3e-14
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 16/148 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRK 58
           +I HRD+K +N  L        K+ DFG ++   L+       + VGTP Y++PE+   +
Sbjct: 121 KILHRDIKSQNIFLS-KNGMVAKLGDFGIAR--QLNDSMELAYTCVGTPYYLSPEICQNR 177

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLE 116
            Y+ K  D+WS G  LY +    +PFE      N    + +I   +++   P + R   +
Sbjct: 178 PYNNK-TDIWSLGCVLYELCTLKHPFEG----NNLHQLVLKICQGYFAPISPNFSR---D 229

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            R L+S++F   P  R +I  I K P+ 
Sbjct: 230 LRSLISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 51/171 (29%), Positives = 73/171 (42%), Gaps = 33/171 (19%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEV-LSR 57
           + HRDLK  N LL+      LKICDFG ++ +             V T  Y APE+ L+ 
Sbjct: 127 VLHRDLKPSNLLLN--TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNS 184

Query: 58  KEYDGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNF---------KTTIQRILSVH-- 104
           K Y   I D+WS G  L  ML     +P +D     N          +  +  I+S+   
Sbjct: 185 KGYTKAI-DIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRAR 243

Query: 105 -Y--SIPGYVRVSLE--CRH-------LLSRIFVADPEKRITIPEIQKHPW 143
            Y  S+P   +V       +       LL ++   +P KRIT+ E   HP+
Sbjct: 244 NYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 68.9 bits (168), Expect = 6e-14
 Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 20/151 (13%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + KS VGTP ++APEV+SR  
Sbjct: 139 VIHRDIKSDSILLTSDG----RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLP 194

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV----RVSL 115
           Y G   D+WS G+ +  M+ G  P+ + E P      +Q +  +  ++P  V    +VS 
Sbjct: 195 Y-GTEVDIWSLGIMVIEMIDGEPPYFN-EPP------LQAMRRIRDNLPPRVKDSHKVSS 246

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
             R  L  + V +P +R T  E+ +HP FLK
Sbjct: 247 VLRGFLDLMLVREPSQRATAQELLQHP-FLK 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 68.6 bits (167), Expect = 8e-14
 Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 12/148 (8%)

Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++RK
Sbjct: 135 QVIHRDIKSDNVLLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 190

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   ++S   R
Sbjct: 191 AYGPKV-DIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSPIFR 246

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +HP FLK
Sbjct: 247 DFLNRCLEMDVEKRGSAKELLQHP-FLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 68.6 bits (168), Expect = 8e-14
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 24/154 (15%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL---- 55
           + HRDLK  N LL  DG     +K+ DFG S  +    Q + T +GTP ++APEV+    
Sbjct: 124 VIHRDLKAGNILLTLDGD----VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACET 179

Query: 56  -SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--- 111
                YD K AD+WS G+TL  +          E P +    ++ +L +  S P  +   
Sbjct: 180 FKDNPYDYK-ADIWSLGITLIELAQM-------EPPHHELNPMRVLLKILKSEPPTLDQP 231

Query: 112 -RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            + S      L    V DP+ R T  E+ KHP+ 
Sbjct: 232 SKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 68.3 bits (168), Expect = 9e-14
 Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 40/171 (23%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSR-KEYD 61
           HRDLK EN L+  S    +KI DFG ++   + S+P  T  V T  Y APE+L R   Y 
Sbjct: 122 HRDLKPENLLV--SGPEVVKIADFGLARE--IRSRPPYTDYVSTRWYRAPEILLRSTSYS 177

Query: 62  GKIADVWSCG---VTLYVM------------------LVGAYPFED--PEDPR-----NF 93
             + D+W+ G     LY +                  ++G  P +   PE  +      F
Sbjct: 178 SPV-DIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGT-PTKQDWPEGYKLASKLGF 235

Query: 94  KTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +       S+H  IP     S E   L+  +   DP+KR T  +  +HP+F
Sbjct: 236 RFPQFAPTSLHQLIP---NASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 67.7 bits (165), Expect = 1e-13
 Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 12/144 (8%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEY 60
           +I HRDLK +N  L   K   LKI DFG S+  +      +T  GTP Y++PE L  + Y
Sbjct: 126 RILHRDLKAKNIFL---KNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGY 182

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-SIPGYVRVSLECRH 119
           D K +D+WS G  LY M   A+ FE     +NF + + RI+     S+P     S +   
Sbjct: 183 DSK-SDIWSLGCILYEMCCLAHAFEG----QNFLSVVLRIVEGPTPSLPE--TYSRQLNS 235

Query: 120 LLSRIFVADPEKRITIPEIQKHPW 143
           ++  +   DP  R +  EI ++P+
Sbjct: 236 IMQSMLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
            +  HRD+K  N LL+       K+ DFG S + +   ++  + +GTP ++APEV+    
Sbjct: 118 NKKIHRDIKAGNILLNEEGQA--KLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIG 175

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+ K AD+WS G+T   M  G  P+ D   P      I        S P   + S E   
Sbjct: 176 YNNK-ADIWSLGITAIEMAEGKPPYSDIH-PMRAIFMIPNKPPPTLSDPE--KWSPEFND 231

Query: 120 LLSRIFVADPEKRITIPEIQKHPWF 144
            + +  V DPE+R +  ++ +HP+ 
Sbjct: 232 FVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 68.5 bits (167), Expect = 1e-13
 Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 57/185 (30%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS-----------SVLHSQPK------------ 41
           HRD+K +N LLD      +K+ DFG               ++ H+ P             
Sbjct: 124 HRDIKPDNLLLDAKG--HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRK 181

Query: 42  -------------STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPF--ED 86
                        STVGTP YIAPEV  +  Y+ K+ D WS GV +Y ML+G  PF  E 
Sbjct: 182 AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSET 240

Query: 87  PEDP----RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI---TIPEIQ 139
           P++      N+K T+          P  V +S + + L+ R F  D E RI    + EI+
Sbjct: 241 PQETYRKVMNWKETL--------VFPPEVPISEKAKDLILR-FCTDSENRIGSNGVEEIK 291

Query: 140 KHPWF 144
            HP+F
Sbjct: 292 SHPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 22/153 (14%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSS---VLHSQPKSTVGTPAYIAPEV--LSR 57
           I HRDLK +N L+D       KI DFG SK S     + Q  S  G+  ++APEV     
Sbjct: 129 ILHRDLKADNLLVDADGI--CKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS 186

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-----IPGYV- 111
           + Y  K+ D+WS G  +  M  G  P+ D E        I  +  +        IP  V 
Sbjct: 187 QGYSAKV-DIWSLGCVVLEMFAGRRPWSDEE-------AIAAMFKLGNKRSAPPIPPDVS 238

Query: 112 -RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
             +S      L+  F  +P+ R T  E+ +HP+
Sbjct: 239 MNLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 12/151 (7%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N LL   +  ++K+CDFG S   V  S   +  GT  Y+APE +  K Y 
Sbjct: 125 KIIHRDIKPSNILLT--RKGQVKLCDFGVSGELVN-SLAGTFTGTSFYMAPERIQGKPYS 181

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP-------GYVRVS 114
              +DVWS G+TL  +    +PF  PE              V+   P         ++ S
Sbjct: 182 IT-SDVWSLGLTLLEVAQNRFPFP-PEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWS 239

Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFL 145
            E +  + +    DP +R T  ++ +HPW  
Sbjct: 240 EEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 67.2 bits (164), Expect = 2e-13
 Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 21/153 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++I HRD+K  N L++     ++K+CDFG S   V +S  K+ VGT AY+APE +S ++Y
Sbjct: 114 LKILHRDVKPSNMLVNTRG--QVKLCDFGVSTQLV-NSIAKTYVGTNAYMAPERISGEQY 170

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ----------RILSVHYSIPGY 110
            G  +DVWS G++   + +G +P+   +  +     +Q           +L V      +
Sbjct: 171 -GIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF 229

Query: 111 VRVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
           V       H +++     P++R     +  HP+
Sbjct: 230 V-------HFITQCMRKQPKERPAPENLMDHPF 255

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 66.4 bits (162), Expect = 3e-13
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 8/87 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRK 58
           +I HRD+K  N  LD      +KI D G +K  +L        + VGTP Y++PE+   K
Sbjct: 121 KILHRDIKSLNLFLD--AYDNVKIGDLGVAK--LLSDNTNFANTIVGTPYYLSPELCEDK 176

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFE 85
            Y+ K +DVW+ GV LY    G +PF+
Sbjct: 177 PYNEK-SDVWALGVVLYECCTGKHPFD 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 66.9 bits (163), Expect = 3e-13
 Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 14/149 (9%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD      + + DFG  K  V   +  ST  GTP Y+APEVL ++ 
Sbjct: 115 LNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEP 172

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           YD +  D W  G  LY ML G  PF      R+       IL     +PG  +    C  
Sbjct: 173 YD-RTVDWWCLGAVLYEMLYGLPPFYS----RDVSQMYDNILHKPLQLPG-GKTVAAC-D 225

Query: 120 LLSRIFVADPEKRI----TIPEIQKHPWF 144
           LL  +   D  +R+       EI+ H +F
Sbjct: 226 LLVGLLHKDQRRRLGAKADFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 66.8 bits (164), Expect = 4e-13
 Identities = 49/177 (27%), Positives = 69/177 (38%), Gaps = 43/177 (24%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEV-LSR 57
           + HRDLK  N L++ +    LKICDFG ++        K      V T  Y APE+ LS 
Sbjct: 124 VIHRDLKPSNILVNSNCD--LKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSS 181

Query: 58  KEYDGKIADVWSCGVTLYVML---------------------VGAYPFEDPEDPRNFKTT 96
             Y   I D+WS G     +L                     +G    ED +   + +  
Sbjct: 182 SRYTKAI-DIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS-EKA 239

Query: 97  IQRILSVHYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
              +     S+P   +  L         E   LL ++ V DP+KRIT  E   HP+ 
Sbjct: 240 RNYLK----SLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 38/161 (23%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           ++ HRD+K +N LL  +K   +K+ DFG S      +Q  ST       +GTP ++APEV
Sbjct: 133 KVIHRDIKGQNILL--TKNAEVKLVDFGVS------AQLDSTLGRRNTFIGTPYWMAPEV 184

Query: 55  LSRKE-----YDGKIADVWSCGVTLYVMLVGAYPFED--PED-----PRNFKTTIQRILS 102
           ++  E     YD + +DVWS G+T   +  G  P  D  P       PRN   T++    
Sbjct: 185 IACDEQPDASYDAR-SDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS--- 240

Query: 103 VHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
                P     S +    +S   + + E+R  + E+ +HP+
Sbjct: 241 -----PE--NWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 65.9 bits (160), Expect = 8e-13
 Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 12/148 (8%)

Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+  + VGTP ++APEV++RK
Sbjct: 136 QVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   ++S   R
Sbjct: 192 AYGPKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFR 247

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +H  FLK
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQ-FLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 11/131 (8%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           HRD+K  N LL  +    +K+ DFG+SK   ++V     ++  GTP Y+APE+  RK Y 
Sbjct: 166 HRDIKSANILLCSNGL--VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYS 223

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K AD++S GV LY +L    PF    D  N +  + + L+  Y  P    +S E + ++
Sbjct: 224 KK-ADMFSLGVLLYELLTLKRPF----DGENMEEVMHKTLAGRYD-PLPPSISPEMQEIV 277

Query: 122 SRIFVADPEKR 132
           + +  +DP++R
Sbjct: 278 TALLSSDPKRR 288

Length = 496

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 65.4 bits (159), Expect = 2e-12
 Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)

Query: 42  STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL 101
           S VGTP YIAPEVL RK Y  ++ D WS GV L+ MLVG  PF  P         I    
Sbjct: 207 SLVGTPNYIAPEVLLRKGYT-QLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN 265

Query: 102 SVHYSIPGYVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWF 144
           ++H  IP  V++S E   L++++  +  E+  R    +I+ HP+F
Sbjct: 266 TLH--IPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFF 308

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 64.8 bits (158), Expect = 2e-12
 Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 36/180 (20%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLSRK 58
           HRD+K +N LLD  K   +++ DFG    S L      TV      GTP YI+PE+L   
Sbjct: 125 HRDIKPDNVLLD--KNGHIRLADFG----SCLRLLADGTVQSNVAVGTPDYISPEILQAM 178

Query: 59  EYDGK-----IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYV 111
           E DGK       D WS GV +Y ML G  PF       +   T  +I++   H+  P  V
Sbjct: 179 E-DGKGRYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHKEHFQFPPDV 233

Query: 112 R-VSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF-------LKNLPIEFMEEDEGSM 160
             VS E + L+ R+ +  PE R+    + + + HP+F       ++N    ++ E     
Sbjct: 234 TDVSEEAKDLIRRL-ICSPETRLGRNGLQDFKDHPFFEGIDWDNIRNSTAPYVPEVSSPT 292

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 63.3 bits (155), Expect = 4e-12
 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
            I H D+KLEN L D +K  R+ +CD+G  K       P    GT  Y +PE +    YD
Sbjct: 129 NIIHNDIKLENVLYDRAK-DRIYLCDYGLCKII---GTPSCYDGTLDYFSPEKIKGHNYD 184

Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-DPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
               D W+ GV  Y +L G +PF+ D ++  + ++ ++R       +P    VS      
Sbjct: 185 VSF-DWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---QKKLPFIKNVSKNANDF 240

Query: 121 LSRIFVADPEKR-ITIPEIQKHPWFLKN 147
           +  +   +   R     EI KHP FLK 
Sbjct: 241 VQSMLKYNINYRLTNYNEIIKHP-FLKI 267

Length = 267

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 38/173 (21%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVL--S 56
           I HRDLK  N L+  DG     LKI DFG ++  S          V T  Y APE+L  +
Sbjct: 120 IMHRDLKPANLLISADGV----LKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA 175

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDP--------RNFKTTIQRILSVHYSIP 108
           RK YD  + D+W+ G     +L G+ P    E+         R   T  +       S+P
Sbjct: 176 RK-YDPGV-DLWAVGCIFAELLNGS-PLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232

Query: 109 GYVRVSL-------------ECR----HLLSRIFVADPEKRITIPEIQKHPWF 144
            Y +++              +       LL  + V DP KR++  E  +HP+F
Sbjct: 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 63.0 bits (153), Expect = 7e-12
 Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 23/153 (15%)

Query: 3   ICHRDLKLENTLLDGSKAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 170

Query: 59  -EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQR-ILSVHYSIPGYVRVSLE 116
             YD   AD +S G  L+ +L G  PF   +     K  I R  L++   +P     S E
Sbjct: 171 VAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLTMAVELPD--SFSPE 225

Query: 117 CRHLLSRIFVADPEKRITI-----PEIQKHPWF 144
            R LL  +   D  +R+        E+++HP+F
Sbjct: 226 LRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 62.4 bits (151), Expect = 1e-11
 Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 12/145 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQP--KSTVGTPAYIAPEVLSRK 58
           I HRD+K  N L D   A  +K+ DFG SK   ++  S    +S  GTP +++PEV+S +
Sbjct: 127 IVHRDIKGANILRD--SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE 184

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y G+ ADVWS G T+  ML    P+ + E        I +I +   +      +S   R
Sbjct: 185 GY-GRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPTNPQLPSHISEHAR 239

Query: 119 HLLSRIFVADPEKRITIPEIQKHPW 143
             L  IFV +   R +  E+ +HP+
Sbjct: 240 DFLGCIFV-EARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 15/145 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG-----YSKSSVLHSQPKSTVGTPAYIAPEVL 55
               HRDL   N L+  +    +KI DFG     Y          K  +    ++APE L
Sbjct: 122 KNFIHRDLAARNCLVGENL--VVKISDFGLSRDLYDDDYYKVKGGKLPI---RWMAPESL 176

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
              ++  K +DVWS GV L+ +       E+P    +    ++ +    Y +P       
Sbjct: 177 KEGKFTSK-SDVWSFGVLLWEIFTLG---EEPYPGMSNAEVLEYLKK-GYRLPKPPNCPP 231

Query: 116 ECRHLLSRIFVADPEKRITIPEIQK 140
           E   L+ + +  DPE R T  E+ +
Sbjct: 232 ELYKLMLQCWAEDPEDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 30/176 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVL-SRKEY 60
           I HRDLK+ N LL       LKI DFG +++  L ++P +  V T  Y APE+L     Y
Sbjct: 129 IIHRDLKVSNLLLTDKGC--LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTY 186

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI-------PGYVRV 113
              I D+W+ G  L  +L          +       IQ + + + SI       P   + 
Sbjct: 187 TTAI-DMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF 245

Query: 114 SLE------CRH-----------LLSRIFVADPEKRITIPEIQKHPWFLKN-LPIE 151
           +L        +H           LL+ + + DP+KR T  E  +  +F +  LP E
Sbjct: 246 TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCE 301

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 42/178 (23%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEVL- 55
             I HRD+K EN L+  S    LK+CDFG++++  L ++P S     V T  Y APE+L 
Sbjct: 119 HNIIHRDIKPENILVSESGV--LKLCDFGFARA--LRARPASPLTDYVATRWYRAPELLV 174

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRIL--------SVHY 105
               Y GK  DVW+ G  +  +L G   +P +   D       IQ+ L         +  
Sbjct: 175 GDTNY-GKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL---YLIQKCLGPLPPSHQELFS 230

Query: 106 S---------IPGYVRVSLECRH--LLSRI---FVA-----DPEKRITIPEIQKHPWF 144
           S                SLE R+   +S     F+      DP++R+T  E+ +HP+F
Sbjct: 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 61.6 bits (149), Expect = 2e-11
 Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 14/144 (9%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS----SVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRD+K  N L D      +K+ DFG SK      +  +  KS  GTP +++PEV+S +
Sbjct: 127 IVHRDIKGANILRD--SVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGE 184

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVSLEC 117
            Y G+ AD+WS G T+  ML    P+ + E     FK   Q     +  +P +  VS  C
Sbjct: 185 GY-GRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ---PTNPVLPPH--VSDHC 238

Query: 118 RHLLSRIFVADPEKRITIPEIQKH 141
           R  L RIFV + + R +  E+ +H
Sbjct: 239 RDFLKRIFV-EAKLRPSADELLRH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 31/167 (18%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV-LSRKEYD 61
           + HRDLK  N L++  +   LKICDFG ++  +   Q    V T  Y APE+ L+ ++YD
Sbjct: 129 VVHRDLKPSNILIN--ENCDLKICDFGLAR--IQDPQMTGYVSTRYYRAPEIMLTWQKYD 184

Query: 62  GKIADVWSCGVTLYVMLVGA--YPFEDPED------------PRNFKTTI--QRILSVHY 105
            ++ D+WS G     ML G   +P +D  +            P +   TI  +  L    
Sbjct: 185 VEV-DIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ 243

Query: 106 SIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
           S+P    V               LL ++ V DP+KRI+  E   HP+
Sbjct: 244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 53/176 (30%), Positives = 72/176 (40%), Gaps = 43/176 (24%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVL-SRKE 59
           I HRDLK  N LL  +    LKICDFG ++   S L    +  V T  Y APE+L   KE
Sbjct: 127 ILHRDLKTSNLLL--NNRGILKICDFGLAREYGSPLKPYTQLVV-TLWYRAPELLLGAKE 183

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDP-RNFKTTIQRILSV-----------HYSI 107
           Y   I D+WS G     +L        P  P ++    + +I  +              +
Sbjct: 184 YSTAI-DMWSVGCIFAELLTK-----KPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237

Query: 108 PG--------YVRVSLECR-----------HLLSRIFVADPEKRITIPEIQKHPWF 144
           PG        Y    L  +            LL+R+   DP KRI+  +  KHP+F
Sbjct: 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 120 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYT 176

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKT 95
            + +D+WS G++L  M +G YP   P D +  + 
Sbjct: 177 VQ-SDIWSLGLSLVEMAIGRYPIP-PPDAKELEA 208

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 60.8 bits (147), Expect = 3e-11
 Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 15/146 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRK 58
            I HRDLK +N  L  ++   +K+ D G ++  VL +Q     + +GTP Y++PE+ S K
Sbjct: 122 HILHRDLKTQNVFL--TRTNIIKVGDLGIAR--VLENQCDMASTLIGTPYYMSPELFSNK 177

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLEC 117
            Y+ K +DVW+ G  +Y M    + F    + ++  + + RI  +   +P   +  S E 
Sbjct: 178 PYNYK-SDVWALGCCVYEMATLKHAF----NAKDMNSLVYRI--IEGKLPPMPKDYSPEL 230

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
             L++ +    PEKR ++  I + P+
Sbjct: 231 GELIATMLSKRPEKRPSVKSILRQPY 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 8/90 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            +I HRD+K EN  ++     ++ I D G ++  V+        GT    APEVL+R +Y
Sbjct: 176 QRIIHRDVKTENIFIN--DVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKY 233

Query: 61  DGKIADVWSCGVTLYVMLVGAYP---FEDP 87
           + K AD+WS G+ L+ ML  AYP   FEDP
Sbjct: 234 NSK-ADIWSAGIVLFEML--AYPSTIFEDP 260

Length = 357

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 61.2 bits (148), Expect = 4e-11
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           QI HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 124 QIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 180

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  + +G YP   P+
Sbjct: 181 VQ-SDIWSMGLSLVELAIGRYPIPPPD 206

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 60.6 bits (148), Expect = 4e-11
 Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 21/148 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG-----YSKSSVLHSQPKSTVGTPAYIAPEVL 55
               HRDL   N L+  +    +KI DFG     Y          K  +    ++APE L
Sbjct: 121 KNFIHRDLAARNCLVGENL--VVKISDFGLSRDLYDDDYYRKRGGKLPI---RWMAPESL 175

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGA---YPFEDPEDPRNFKTTIQRILSVHYSIPGYVR 112
              ++  K +DVWS GV L+ +       YP    E+   +     R+            
Sbjct: 176 KEGKFTSK-SDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNC------ 228

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQK 140
              E   L+ + +  DPE R T  E+ +
Sbjct: 229 -PPELYDLMLQCWAEDPEDRPTFSELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 60.8 bits (147), Expect = 4e-11
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 15/135 (11%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLSR 57
           ++ HRD+K +N  L  ++  ++K+ DFG   S+ L + P +     VGTP Y+ PE+   
Sbjct: 120 RVLHRDIKSKNIFL--TQNGKVKLGDFG---SARLLTSPGAYACTYVGTPYYVPPEIWEN 174

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
             Y+ K +D+WS G  LY +    +PF+      ++K  I ++    Y  P     S E 
Sbjct: 175 MPYNNK-SDIWSLGCILYELCTLKHPFQ----ANSWKNLILKVCQGSYK-PLPSHYSYEL 228

Query: 118 RHLLSRIFVADPEKR 132
           R L+ ++F  +P  R
Sbjct: 229 RSLIKQMFKRNPRSR 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 60.8 bits (147), Expect = 4e-11
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 24/155 (15%)

Query: 1   MQICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEV--- 54
           M+I HRDLK  N LL  DG     +K+ DFG S  +V   Q + S +GTP ++APEV   
Sbjct: 129 MKIIHRDLKAGNVLLTLDGD----IKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMC 184

Query: 55  --LSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV- 111
             +    YD K AD+WS G+TL  M          E P +    ++ +L +  S P  + 
Sbjct: 185 ETMKDTPYDYK-ADIWSLGITLIEM-------AQIEPPHHELNPMRVLLKIAKSEPPTLS 236

Query: 112 ---RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
              + S+E R  L       PE R +  ++ +HP+
Sbjct: 237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF 271

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 60.8 bits (147), Expect = 4e-11
 Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 14/145 (9%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQP--KSTVGTPAYIAPEVLSRK 58
           I HRD+K  N L D   A  +K+ DFG SK   ++  S    KS  GTP +++PEV+S +
Sbjct: 127 IVHRDIKGANILRD--SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE 184

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVSLEC 117
            Y G+ ADVWS   T+  ML    P+ + E     FK   Q        +P    VS  C
Sbjct: 185 GY-GRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQ---PTKPMLPD--GVSDAC 238

Query: 118 RHLLSRIFVADPEKRITIPEIQKHP 142
           R  L +IFV + ++R T   + +HP
Sbjct: 239 RDFLKQIFVEE-KRRPTAEFLLRHP 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 60.8 bits (148), Expect = 4e-11
 Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 8/88 (9%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL---S 56
           ++I HRD+K  N LLD +    +K+CDFG S   V  S  K+   G   Y+APE +   +
Sbjct: 127 LKIIHRDVKPSNILLDRNGN--IKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSA 183

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPF 84
           R  YD + +DVWS G+TLY +  G +P+
Sbjct: 184 RDGYDVR-SDVWSLGITLYEVATGKFPY 210

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 61/202 (30%), Positives = 82/202 (40%), Gaps = 50/202 (24%)

Query: 5   HRDLKLENTL--LDGSKAPRLKICDFGYSKS-SVLH--SQPKST--VGTPAYIAPEV-LS 56
           HRDLK  N L   D      LKICDFG ++  S     +    T  V T  Y APE+ LS
Sbjct: 128 HRDLKPGNLLVNADC----ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLS 183

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPF---EDPEDPRNF---------KTTIQRILSVH 104
            + Y   I DVWS G  L   L+G  P    +D  D  N          + T+ RI S  
Sbjct: 184 FQSYTKAI-DVWSVGCIL-AELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPK 241

Query: 105 -----YSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPW------- 143
                 S+P   +                LL ++   DP KRI++ E  +HP+       
Sbjct: 242 AQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDP 301

Query: 144 ---FLKNLPIEFMEEDEGSMQK 162
               +   P +F  E E SM++
Sbjct: 302 DDEPVCQKPFDFSFESEDSMEE 323

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 60.8 bits (148), Expect = 5e-11
 Identities = 56/179 (31%), Positives = 73/179 (40%), Gaps = 44/179 (24%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQ-PKSTVGTPAYIAPEVL- 55
            + HRDLK  N L++      L+I DFG     S S   H       V T  Y APE+L 
Sbjct: 127 NVIHRDLKPSNLLVNED--CELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLL 184

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDP-RNFKTTIQRILSVHYSIPGYV--- 111
           S  EY   I D+WS G     ML     F     P +N+   ++ ILSV  S    V   
Sbjct: 185 SLPEYTTAI-DMWSVGCIFAEMLGRRQLF-----PGKNYVHQLKLILSVLGSPSEEVLNR 238

Query: 112 ----RV----------------------SLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               RV                      S E   LLS++   DPE+RIT+ +  +HP+ 
Sbjct: 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 60.3 bits (147), Expect = 6e-11
 Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 34/174 (19%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK----STVGTPAYIAPEVLSRK 58
           I HRDLK  N L+       LK+ DFG ++S      P       V T  Y APE+L   
Sbjct: 123 ILHRDLKPNNLLIA--SDGVLKLADFGLARS---FGSPNRKMTHQVVTRWYRAPELLFGA 177

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--------VHYSIPGY 110
            + G   D+WS G     +L+   PF   +   +    I   L            S+P Y
Sbjct: 178 RHYGVGVDMWSVGCIFAELLLRV-PFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY 236

Query: 111 VRV---------------SLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           V                 S +   LL R+   +P KRIT  +  +HP+F  N P
Sbjct: 237 VEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF-SNDP 289

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 60.5 bits (147), Expect = 6e-11
 Identities = 56/174 (32%), Positives = 74/174 (42%), Gaps = 40/174 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEV-LSRKEY 60
           + HRDLK  N LL+ +    LKICDFG ++ +S         V T  Y APE+ L+  EY
Sbjct: 129 VLHRDLKPSNLLLNANC--DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEY 186

Query: 61  DGKIADVWSCG---------------------VTLYVMLVGAYPFEDPEDPRNFKTTIQR 99
              I DVWS G                     + L   L+G+   ED    RN K   +R
Sbjct: 187 TTAI-DVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA--RR 243

Query: 100 ILSVHYSIPGYVRVSLECRH---------LLSRIFVADPEKRITIPEIQKHPWF 144
            +    S+P   R S              LL ++ V DP KRIT+ E   HP+ 
Sbjct: 244 YIR---SLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 60.4 bits (146), Expect = 8e-11
 Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 57/185 (30%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS-----------SVLHSQPK------------ 41
           HRD+K +N LLD      +K+ DFG               ++ HS P             
Sbjct: 124 HRDIKPDNLLLDSKG--HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK 181

Query: 42  -------------STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPF--ED 86
                        STVGTP YIAPEV  +  Y+ K+ D WS GV +Y ML+G  PF  E 
Sbjct: 182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSET 240

Query: 87  PEDP----RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIP---EIQ 139
           P++      N+K T+          P  V +S + + L+ R F  + E RI  P   EI+
Sbjct: 241 PQETYKKVMNWKETL--------IFPPEVPISEKAKDLILR-FCCEWEHRIGAPGVEEIK 291

Query: 140 KHPWF 144
            +P+F
Sbjct: 292 TNPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 60.0 bits (145), Expect = 9e-11
 Identities = 43/106 (40%), Positives = 54/106 (50%), Gaps = 7/106 (6%)

Query: 42  STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL 101
           S VGTP YIAPEVL R  Y  ++ D WS GV LY MLVG  PF            I    
Sbjct: 207 SLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT 265

Query: 102 SVHYSIPGYVRVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
           S+H  IP   ++S E   L+ ++    PE R+      EI+ HP+F
Sbjct: 266 SLH--IPPQAKLSPEASDLIIKL-CRGPEDRLGKNGADEIKAHPFF 308

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 59.6 bits (144), Expect = 1e-10
 Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 29/157 (18%)

Query: 5   HRDLKLENTLLDGSKAPRL-------KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR 57
           HRD+K +N LLD +   RL       K+   G  +SSV        VGTP YI+PE+L  
Sbjct: 125 HRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSV-------AVGTPDYISPEILQA 177

Query: 58  KEYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYV 111
            E      G   D WS GV +Y ML G  PF       +   T  +I++    +  P ++
Sbjct: 178 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHEERFQFPSHI 233

Query: 112 R-VSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
             VS E + L+ R+ +   E+R+    I + +KH +F
Sbjct: 234 TDVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF 269

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 32/154 (20%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYS---KSSVLHSQPKSTVGTPAYIAPEVL---SRK 58
           HRD+K  N LL  ++   +K+ DFG S    +++  ++ KS +GTP ++APEV     + 
Sbjct: 124 HRDIKGANILL--TEDGDVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKG 179

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLE 116
            YDGK  D+W+ G+T   +            P  F     R L   + I    +    L+
Sbjct: 180 GYDGK-CDIWALGITAIELAELQ--------PPMFDLHPMRAL---FLISKSNFPPPKLK 227

Query: 117 CRHLLSRIF--------VADPEKRITIPEIQKHP 142
            +   S +F          DP+KR T  ++ +HP
Sbjct: 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 39/160 (24%), Positives = 55/160 (34%), Gaps = 42/160 (26%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
            +  HRDL   N L+       +KI DFG S+        +   G    I   APE L  
Sbjct: 124 KKFVHRDLAARNCLVGEDL--VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKD 181

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED---------------PEDPRNFKTTIQRIL 101
             +  K +DVWS GV L+ +  +GA P+                    P      +  ++
Sbjct: 182 GIFTSK-SDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELM 240

Query: 102 SVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH 141
                        L C  L       DPE R T  E+ + 
Sbjct: 241 -------------LSCWQL-------DPEDRPTFSELVER 260

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 59.3 bits (143), Expect = 2e-10
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 124 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 180

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  M +G YP   P+
Sbjct: 181 VQ-SDIWSMGLSLVEMAIGRYPIPPPD 206

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 59.2 bits (143), Expect = 2e-10
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 11/157 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
             +RDLK EN LLD      ++I D G +         +  VGT  Y+APEVL+ + Y  
Sbjct: 123 TVYRDLKPENILLDDYG--HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRY-T 179

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D W  G  +Y M+ G  PF   ++    +   +R+L          + S E + +  
Sbjct: 180 LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSA--KFSEEAKSICK 237

Query: 123 RIFVADPEKRITIP-----EIQKHPWFLKNLPIEFME 154
            +   DP++R+        E+++HP F +N+  + +E
Sbjct: 238 MLLTKDPKQRLGCQEEGAGEVKRHP-FFRNMNFKRLE 273

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 16/151 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEY 60
           +I +RDLK EN LLD      ++I D G +   +   +  +  VGT  Y+APEV+  + Y
Sbjct: 122 RIVYRDLKPENILLDDYG--HIRISDLGLA-VEIPEGETIRGRVGTVGYMAPEVVKNERY 178

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH--YSIPGYVRVSLECR 118
                D W  G  +Y M+ G  PF   ++    +   +R+      YS     + S   R
Sbjct: 179 -TFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYS----EKFSEAAR 233

Query: 119 HLLSRIFVADPEKRI-----TIPEIQKHPWF 144
            +  ++   DP  R+        E++ HP+F
Sbjct: 234 SICRQLLTKDPGFRLGCRGEGAEEVKAHPFF 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)

Query: 42  STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPF--EDPEDPRNFKTTIQR 99
           STVGTP YIAPE+  ++ Y G+  D WS G  ++  L+G  PF  E+  +      T ++
Sbjct: 207 STVGTPDYIAPEIFLQQGY-GQECDWWSLGAIMFECLIGWPPFCSENSHE------TYRK 259

Query: 100 ILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
           I++   ++  P  + +S+E   L+ R+ + + E R+      EI+ HP+F
Sbjct: 260 IINWRETLYFPDDIHLSVEAEDLIRRL-ITNAENRLGRGGAHEIKSHPFF 308

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 58.7 bits (142), Expect = 2e-10
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 7/137 (5%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDL   N +L   +  ++ I DFG +K     S+  S VGT  Y  PE++  + Y 
Sbjct: 134 RIVHRDLTPNNIML--GEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPY- 190

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+ ADVW+ G  LY M     PF       N  +   +I+   Y        S +   ++
Sbjct: 191 GEKADVWAFGCILYQMCTLQPPFYS----TNMLSLATKIVEAVYEPLPEGMYSEDVTDVI 246

Query: 122 SRIFVADPEKRITIPEI 138
           +     D E R  I ++
Sbjct: 247 TSCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 36/170 (21%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRD+K EN L+   K   LK+ DFG  +   ++S+P  T  + T  Y APE L    Y
Sbjct: 121 IFHRDIKPENILI---KDDILKLADFGSCRG--IYSKPPYTEYISTRWYRAPECLLTDGY 175

Query: 61  DGKIADVWSCGVTLYVM--LVGAYPFEDPED-----------P-------------RNFK 94
            G   D+W+ G   + +  L   +P  +  D           P              N+ 
Sbjct: 176 YGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN 235

Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
              ++   +   +P     S E   LL ++   DP++RIT  +  +HP+F
Sbjct: 236 FPSKKGTGLRKLLP---NASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 57.7 bits (139), Expect = 5e-10
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+  + Y 
Sbjct: 122 RIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 179

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS---VHYSIPGYVRVSLECR 118
               D W+ G  LY M+ G  PF+     +  +  ++R++      YS     + S + R
Sbjct: 180 FS-PDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVQEEYS----EKFSPDAR 233

Query: 119 HLLSRIFVADPEKRI-----TIPEIQKHPWF 144
            L   +   DP++R+        E+++HP F
Sbjct: 234 SLCKMLLCKDPKERLGCQGGGAREVKEHPLF 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 57.4 bits (138), Expect = 6e-10
 Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 23/151 (15%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDG 62
           HRD+K  N LL  S+   +K+ DFG +   +  +Q K  + VGTP ++APEV+ +  YD 
Sbjct: 124 HRDIKAANVLL--SEQGDVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS 180

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL------E 116
           K AD+WS G+T   +  G  P  D    R           V + IP     +L       
Sbjct: 181 K-ADIWSLGITAIELAKGEPPNSDMHPMR-----------VLFLIPKNNPPTLTGEFSKP 228

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            +  +      DP  R T  E+ KH + +KN
Sbjct: 229 FKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 57.0 bits (137), Expect = 9e-10
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 21/149 (14%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYDGK 63
           HRD+K  N LL  S+   +K+ DFG +         ++T VGTP ++APEV+ +  YD K
Sbjct: 124 HRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFK 181

Query: 64  IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH---- 119
            AD+WS G+T   +  G  P  D    R           V + IP     +LE ++    
Sbjct: 182 -ADIWSLGITAIELAKGEPPNSDLHPMR-----------VLFLIPKNSPPTLEGQYSKPF 229

Query: 120 --LLSRIFVADPEKRITIPEIQKHPWFLK 146
              +      DP  R T  E+ KH +  +
Sbjct: 230 KEFVEACLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 57.0 bits (137), Expect = 9e-10
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 2   QICHRDLKLENTLLDGS---KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           ++ HRD+K  N  +  +   K   L +  F  SK++  HS     VGTP Y++PE +   
Sbjct: 126 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS----LVGTPYYMSPERIHEN 181

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y+ K +D+WS G  LY M     PF    D  N  +  ++I    Y        S E R
Sbjct: 182 GYNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSDHYSEELR 238

Query: 119 HLLSRIFVADPEKR 132
            L++     DPEKR
Sbjct: 239 QLVNMCINPDPEKR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 57.0 bits (137), Expect = 1e-09
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 21/157 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLSRK 58
           +   HRD+K +N L+D +   RL   DFG     +     +S+V  GTP YI+PE+L   
Sbjct: 121 LHYVHRDIKPDNILMDMNGHIRL--ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 178

Query: 59  EYDGK-----IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYV 111
           E DGK       D WS GV +Y ML G  PF       +   T  +I++    +  P  V
Sbjct: 179 E-DGKGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHKERFQFPAQV 233

Query: 112 R-VSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
             VS + + L+ R+ +   E R+    I + ++HP+F
Sbjct: 234 TDVSEDAKDLIRRL-ICSREHRLGQNGIEDFKQHPFF 269

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 56.6 bits (136), Expect = 1e-09
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 25/152 (16%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEYDG 62
           HRD+K  N LL  S+   +K+ DFG +   +  +Q K    VGTP ++APEV+ +  YD 
Sbjct: 124 HRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 180

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYVRVSL 115
           K AD+WS G+T   +  G  P  +          P+N   T++     +YS P       
Sbjct: 181 K-ADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEG----NYSKP------- 228

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             +  +      +P  R T  E+ KH + ++ 
Sbjct: 229 -LKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 34/170 (20%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            +I HRDLK +N L+  +   ++KI DFG ++         S V T  Y APEVL +  Y
Sbjct: 126 HRIVHRDLKPQNILV--TSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSY 183

Query: 61  DGKIADVWSCGVTLYVM---------------------LVGAYPFEDPEDPRNFKTTIQR 99
              + D+WS G     +                     ++G  P E+ E PRN       
Sbjct: 184 ATPV-DMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIG-LPSEE-EWPRNVSLPRS- 239

Query: 100 ILSVHYSIPGYVR-----VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             S     P   +     +  E   LL ++   +P KRI+  E  +HP+F
Sbjct: 240 --SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 36/172 (20%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVL--SRK 58
           ++ HRDLK +N L++  K   LK+ DFG +++  +  +   + V T  Y AP+VL  SR 
Sbjct: 120 RVLHRDLKPQNLLIN--KRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRT 177

Query: 59  EYDGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRILSV--HYSIPG----- 109
            Y   I D+WS G  +  M+ G   +P  + ED       I RI+      + PG     
Sbjct: 178 -YSTSI-DIWSVGCIMAEMITGRPLFPGTNNEDQLL---KIFRIMGTPTESTWPGISQLP 232

Query: 110 -YVRVSLECRH----------------LLSRIFVADPEKRITIPEIQKHPWF 144
            Y                         LL R+   +PE RI+  +  +HPWF
Sbjct: 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 43/203 (21%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEV-LSRKE 59
           I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE+ L+   
Sbjct: 139 IIHRDLKPSNIAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 192

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPED------------PRNFKTTIQ--RILSV 103
           Y+ +  D+WS G  +  +L G   +P  D  D                   I      + 
Sbjct: 193 YN-QTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNY 251

Query: 104 HYSIPGYVR---------VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK-NLPIEFM 153
             S+P   +          +     LL ++ V DP+KRIT  E   HP+  + + P    
Sbjct: 252 IQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP---- 307

Query: 154 EEDEGSMQKGDENDQSQ--SIEE 174
            EDE      D++ +S+  +++E
Sbjct: 308 -EDEPVAPPYDQSFESRDLTVDE 329

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 19/134 (14%)

Query: 44  VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV 103
           +GTP Y+APE+L  K + G   D W+ GV L+  L G  PF D E P   +   Q IL+ 
Sbjct: 541 LGTPDYLAPELLLGKPH-GPAVDWWALGVCLFEFLTGIPPFND-ETP---QQVFQNILNR 595

Query: 104 HYSIP-GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF-------LKNLPIEFMEE 155
               P G  ++S+  ++ +  +   DP KR  + E+++HP F       L+N  + F+  
Sbjct: 596 DIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGVDWENLQNQTMPFIP- 654

Query: 156 DEGSMQKGDENDQS 169
                Q  DE D S
Sbjct: 655 -----QPDDETDTS 663

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 9/72 (12%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LSRKEYD 61
           HRD+K  N LL  ++   +K+ DFG   S+ L S   S VGTP ++APEV   +   +YD
Sbjct: 138 HRDIKAGNILL--TEPGTVKLADFG---SASLVSPANSFVGTPYWMAPEVILAMDEGQYD 192

Query: 62  GKIADVWSCGVT 73
           GK  DVWS G+T
Sbjct: 193 GK-VDVWSLGIT 203

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 56.7 bits (136), Expect = 2e-09
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 18/115 (15%)

Query: 2   QICHRDLKLENTLLDG---------------SKAPRLKICDFGYSKSSVLHSQPKSTVGT 46
           ++ HRDLK +N  L                 +  P  KI DFG SK+  + S   S VGT
Sbjct: 145 RVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGT 204

Query: 47  PAYIAPEVL--SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQR 99
           P Y +PE+L    K YD K +D+W+ G  +Y +  G  PF    +     + ++R
Sbjct: 205 PYYWSPELLLHETKSYDDK-SDMWALGCIIYELCSGKTPFHKANNFSQLISELKR 258

Length = 1021

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 2   QICHRDLKLENTLLDGS---KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           ++ HRD+K  N  +  +   K   L +  F  SK++  HS     VGTP Y++PE +   
Sbjct: 126 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS----LVGTPYYMSPERIHEN 181

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-SIPGYVRVSLEC 117
            Y+ K +D+WS G  LY M     PF    D  N  +  Q+I    Y  +P     S + 
Sbjct: 182 GYNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLFSLCQKIEQCDYPPLPTE-HYSEKL 237

Query: 118 RHLLSRIFVADPEKRITI 135
           R L+S     DP++R  I
Sbjct: 238 RELVSMCIYPDPDQRPDI 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 55.3 bits (133), Expect = 3e-09
 Identities = 55/201 (27%), Positives = 82/201 (40%), Gaps = 39/201 (19%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +   S+    V T  Y APEV+    +  
Sbjct: 139 IIHRDLKPGN--LAVNEDCELKILDFGLARQT--DSEMTGYVVTRWYRAPEVILNWMHYT 194

Query: 63  KIADVWSCGVTLYVMLVGAYPFE--------------------------DPEDPRNFKTT 96
           +  D+WS G  +  ML G   F+                            ED +N+   
Sbjct: 195 QTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKK 254

Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFME-E 155
           + R     +        +    ++L ++ V D E RIT  E   HP+F      EF + E
Sbjct: 255 LPRFRKKDFRSL-LPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE-----EFHDPE 308

Query: 156 DEGSMQKGDE--NDQSQSIEE 174
           DE      D+  ++  QS+EE
Sbjct: 309 DETEAPPYDDSFDEVDQSLEE 329

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 54/192 (28%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKS------TVGTPAYIAPEV 54
           + HRDLK  N L+  +G +   +KI D G ++  + ++  K        V T  Y APE+
Sbjct: 129 VLHRDLKPANILVMGEGPERGVVKIGDLGLAR--LFNAPLKPLADLDPVVVTIWYRAPEL 186

Query: 55  -LSRKEYDGKIADVWSCGVTLYVMLVGAYPF----EDPEDPRN--FKTTIQRILSV---- 103
            L  + Y   I D+W+ G  ++  L+   P     E      N   +  ++RI  V    
Sbjct: 187 LLGARHYTKAI-DIWAIGC-IFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTP 244

Query: 104 ---------------------------HYSIPGYV----RVSLECRHLLSRIFVADPEKR 132
                                        S+  ++    +   +   LL ++   DP KR
Sbjct: 245 TEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKR 304

Query: 133 ITIPEIQKHPWF 144
           IT  E  +HP+F
Sbjct: 305 ITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 54.6 bits (131), Expect = 5e-09
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 24/154 (15%)

Query: 2   QICHRDLKLENTL--LDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL--- 55
           +I HRDLK  N L  LDG     +K+ DFG S  +    Q + S +GTP ++APEV+   
Sbjct: 123 KIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 178

Query: 56  --SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-- 111
               + YD K ADVWS G+TL  M          E P +    ++ +L +  S P  +  
Sbjct: 179 TSKDRPYDYK-ADVWSLGITLIEM-------AQIEPPHHELNPMRVLLKIAKSEPPTLAQ 230

Query: 112 --RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
             R S E +  L +    + + R T  ++ +HP+
Sbjct: 231 PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 54.9 bits (133), Expect = 5e-09
 Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 39/176 (22%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL-SR 57
             I HRD+K  N L++      LK+ DFG ++     +    T  V T  Y  PE+L   
Sbjct: 119 NGILHRDIKGSNILINNDG--VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGA 176

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPF------------------------EDPEDPRNF 93
             Y  ++ D+WS G  L  + +G   F                                F
Sbjct: 177 TRYGPEV-DMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF 235

Query: 94  KT-----TIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +        +R L   +       +      LL ++   DP+KRI+  +  +H +F
Sbjct: 236 ENLKPKKPYKRRLREFFKH----LIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 54.6 bits (131), Expect = 6e-09
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 15/162 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I +RDLK EN LLD      ++I D G +         +  VGT  Y+APEV++ ++Y 
Sbjct: 122 RIVYRDLKPENILLDDRG--HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYT 179

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL--SVHYSIPGYVRVSLECRH 119
               D W  G  +Y M+ G  PF   ++    +   +R+      YS          CR 
Sbjct: 180 FS-PDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRM 238

Query: 120 LLSRIFVADPEKRITI-----PEIQKHPWFLKNLPIEFMEED 156
           LL++    +P++R+         +++HP F KN+  + +E +
Sbjct: 239 LLTK----NPKERLGCRGNGAAGVKQHPIF-KNINFKRLEAN 275

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 54.3 bits (130), Expect = 8e-09
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 9/72 (12%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LSRKEYD 61
           HRD+K  N LL  ++  ++K+ DFG   S+   S   S VGTP ++APEV   +   +YD
Sbjct: 144 HRDIKAGNILL--TEPGQVKLADFG---SASKSSPANSFVGTPYWMAPEVILAMDEGQYD 198

Query: 62  GKIADVWSCGVT 73
           GK+ DVWS G+T
Sbjct: 199 GKV-DVWSLGIT 209

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 54.2 bits (130), Expect = 8e-09
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 21/155 (13%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKE- 59
           +I HRD+K  N LL       +K+ DFG S   +    +  ++VGTP ++APEV++ ++ 
Sbjct: 148 RIIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ 205

Query: 60  ----YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
               YD +  DVWS G+T       A    D + P      ++ +  +  + P  +    
Sbjct: 206 YDYSYDAR-CDVWSLGIT-------AIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPE 257

Query: 116 E-CR---HLLSRIFVADPEKRITIPEIQKHPWFLK 146
           + CR   H +S+  + D E R ++  + +HP F+K
Sbjct: 258 KWCRSFNHFISQCLIKDFEARPSVTHLLEHP-FIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 54.2 bits (130), Expect = 8e-09
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 21/152 (13%)

Query: 3   ICHRDLKLENTLLDGSKAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 170

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRI-LSVHYSIPGYVRVSLEC 117
                 AD +S G  L+ +L G  PF   +     K  I R+ L+V+  +P     S E 
Sbjct: 171 TAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTVNVELPD--SFSPEL 226

Query: 118 RHLLSRIFVADPEKRITI-----PEIQKHPWF 144
           + LL  +   D  KR+        E+++H +F
Sbjct: 227 KSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFF 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 39/177 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++  +      V T  Y APEV+    Y  
Sbjct: 144 IIHRDLKPSNIVVKSDCT--LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKE 201

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--------------- 107
            + D+WS G  +  ++ G+  F+  +    +   I+++ +                    
Sbjct: 202 NV-DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENR 260

Query: 108 PGYVRVSLE---------------------CRHLLSRIFVADPEKRITIPEIQKHPW 143
           P Y  +S E                      R LLS++ V DP+KRI++ E  +HP+
Sbjct: 261 PQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 18/181 (9%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LSRKE 59
           + HRD+K  N LL  ++  ++K+ DFG   S+ + S   S VGTP ++APEV   +   +
Sbjct: 146 MIHRDIKAGNILL--TEPGQVKLADFG---SASIASPANSFVGTPYWMAPEVILAMDEGQ 200

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           YDGK+ DVWS G+T  + L    P   P    N  + +  I             S   R+
Sbjct: 201 YDGKV-DVWSLGITC-IELAERKP---PLFNMNAMSALYHIAQNESPTLQSNEWSDYFRN 255

Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNLP----IEFMEEDEGSMQKGDENDQSQSIEEI 175
            +       P+ R T  E+ KH + L+  P    I+ ++  + ++++ D N Q + ++++
Sbjct: 256 FVDSCLQKIPQDRPTSEELLKHMFVLRERPETVLIDLIQRTKDAVRELD-NLQYRKMKKL 314

Query: 176 L 176
           L
Sbjct: 315 L 315

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 47/170 (27%), Positives = 68/170 (40%), Gaps = 32/170 (18%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL-SRKE 59
           I HRD+K  N L++ +    LKICDFG ++          T  V T  Y APE+L   + 
Sbjct: 124 ILHRDIKPGNLLVNSN--CVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRH 181

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFE--DPEDPRNFKTTI-----------------QRI 100
           Y   + D+WS G     +L     F+   P    +  T +                   I
Sbjct: 182 YTSAV-DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHI 240

Query: 101 LSVHYSIPGYVRVSL-------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
           L   +  P    +         E  HLL R+ V DP+KRI+  +   HP+
Sbjct: 241 LRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 9/91 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE- 59
           ++ HRD+K +N LL  ++   +K+ DFG S         ++T +GTP ++APEV++  E 
Sbjct: 141 KVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 198

Query: 60  ----YDGKIADVWSCGVTLYVMLVGAYPFED 86
               YD + +D+WS G+T   M  GA P  D
Sbjct: 199 PDATYDYR-SDIWSLGITAIEMAEGAPPLCD 228

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 21/143 (14%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTP-AYIAPEVLSRKE 59
           HRDL   N LL  S+   +KICDFG ++   ++  P    K +   P  ++APE +  K 
Sbjct: 197 HRDLAARNILL--SENNVVKICDFGLARD--IYKDPDYVRKGSARLPLKWMAPESIFDKV 252

Query: 60  YDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQ---RILSVHYSIPGYVRVSL 115
           Y  + +DVWS GV L+ +  +GA P+   +    F   ++   R+ +   + P   R+ L
Sbjct: 253 YTTQ-SDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIML 311

Query: 116 ECRHLLSRIFVADPEKRITIPEI 138
            C          DP++R T   +
Sbjct: 312 ACWQ-------GDPKERPTFSAL 327

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M I +RD+K EN LLD     RL   D G +             GT  Y+APE+L  + Y
Sbjct: 114 MDIVYRDMKPENVLLDDQGNCRLS--DLGLAVELKDGKTITQRAGTNGYMAPEILKEEPY 171

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL 101
              + D ++ G ++Y M+ G  PF+D ++    +   +R L
Sbjct: 172 SYPV-DWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTL 211

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 52.1 bits (126), Expect = 4e-08
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 11/92 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
               HRDL   N L+  +    +KI DFG S+   ++            +     APE L
Sbjct: 121 KNFVHRDLAARNCLVTENL--VVKISDFGLSR--DIYEDDYYRKRGGGKLPIKWMAPESL 176

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
              ++  K +DVWS GV L+ +  +G  P+  
Sbjct: 177 KDGKFTSK-SDVWSFGVLLWEIFTLGEQPYPG 207

Length = 258

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 10/89 (11%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS------SVLHSQP-KSTVGTPAYIAPEVL 55
           + HRD+K  N +L  +    +K+ DFG ++          HS   KS  GTP ++APEV+
Sbjct: 123 VVHRDIKGNNVMLMPNGI--IKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVI 180

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPF 84
           +   Y G+ +D+WS G T++ M  G  P 
Sbjct: 181 NESGY-GRKSDIWSIGCTVFEMATGKPPL 208

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 52.0 bits (124), Expect = 5e-08
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 9/72 (12%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LSRKEYD 61
           HRD+K  N LL  S+   +K+ DFG   S+ + +     VGTP ++APEV   +   +YD
Sbjct: 138 HRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMDEGQYD 192

Query: 62  GKIADVWSCGVT 73
           GK+ DVWS G+T
Sbjct: 193 GKV-DVWSLGIT 203

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 52.3 bits (125), Expect = 5e-08
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV-LSRKEYD 61
           ICHRDLK +N L+D      LK+CDFG +K+ +   +  S + +  Y APE+ L    Y 
Sbjct: 191 ICHRDLKPQNLLID-PNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYT 249

Query: 62  GKIADVWSCGVTLYVMLVGAYP 83
             I D+WS G  +  M++G YP
Sbjct: 250 THI-DLWSLGCIIAEMILG-YP 269

Length = 440

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 52.0 bits (124), Expect = 5e-08
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 23/147 (15%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTP-AYIAPEVLSRKE 59
           HRDL   N LL  S+   +KICDFG ++   ++  P    K     P  ++APE +  + 
Sbjct: 202 HRDLAARNILL--SENNVVKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPETIFDRV 257

Query: 60  YDGKIADVWSCGVTLY-VMLVGAYPFE----DPEDPRNFKTTIQRILSVHYSIPGYVRVS 114
           Y  + +DVWS GV L+ +  +GA P+     D E  R  K    R+ +  Y+ P   +  
Sbjct: 258 YTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTM 315

Query: 115 LECRHLLSRIFVADPEKRITIPEIQKH 141
           L+C H        +P +R T  E+ +H
Sbjct: 316 LDCWH-------GEPSQRPTFSELVEH 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 51.4 bits (123), Expect = 8e-08
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 23/147 (15%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTP-AYIAPEVLSRKE 59
           HRDL   N LL  S+   +KICDFG ++   ++  P    K     P  ++APE +  K 
Sbjct: 196 HRDLAARNILL--SENNVVKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPESIFDKV 251

Query: 60  YDGKIADVWSCGVTLY-VMLVGAYPFE----DPEDPRNFKTTIQRILSVHYSIPGYVRVS 114
           Y  + +DVWS GV L+ +  +GA P+     D E  R  K    R+ +  Y+ P    + 
Sbjct: 252 YTTQ-SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT-RMRAPEYATPEIYSIM 309

Query: 115 LECRHLLSRIFVADPEKRITIPEIQKH 141
           L+C H        +PE R T  E+ + 
Sbjct: 310 LDCWH-------NNPEDRPTFSELVEI 329

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 30/169 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRD+K EN L+  S++  +K+CDFG++++ +       T  V T  Y APE+L     
Sbjct: 121 IIHRDIKPENILV--SQSGVVKLCDFGFART-LAAPGEVYTDYVATRWYRAPELLVGDTK 177

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYVRV 113
            G+  D+W+ G  +  ML G   F    D        +     I R   +    P +  +
Sbjct: 178 YGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237

Query: 114 SL-ECRHL--LSRIFVA---------------DPEKRITIPEIQKHPWF 144
            L E + +  L + F                 DP+ R +  ++  H +F
Sbjct: 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 38/172 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEV-LSR 57
           + HRDLK +N L+D  +   LK+ DFG +++      P  T    V T  Y APE+ L  
Sbjct: 120 VLHRDLKPQNLLID--REGALKLADFGLARA---FGVPVRTYTHEVVTLWYRAPEILLGS 174

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPRNFKTTIQRILSV------------- 103
           ++Y   + D+WS G     M+     F  D E  + F+  I R L               
Sbjct: 175 RQYSTPV-DIWSIGCIFAEMVNRRPLFPGDSEIDQLFR--IFRTLGTPDEDVWPGVTSLP 231

Query: 104 --HYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               + P + R  L         +   LLS++ V DP KRI+     +HP+F
Sbjct: 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 50.5 bits (120), Expect = 1e-07
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE- 59
           ++ HRD+K +N LL  ++   +K+ DFG S         ++T +GTP ++APEV++  E 
Sbjct: 131 KVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 188

Query: 60  ----YDGKIADVWSCGVTLYVMLVGAYPFED 86
               YD K +D+WS G+T   M  GA P  D
Sbjct: 189 PDATYDFK-SDLWSLGITAIEMAEGAPPLCD 218

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 50/180 (27%), Positives = 74/180 (41%), Gaps = 45/180 (25%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST------VGTPAYIAPEVL 55
            + HRDLK  N LL+ S   R+K+ DFG ++S     +          V T  Y APE+L
Sbjct: 127 NVIHRDLKPSNILLN-SDC-RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEIL 184

Query: 56  --SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH--------- 104
             S + Y  K  D+WS G  L  ML+G   F       +    +++I+ V          
Sbjct: 185 LGSTR-YT-KGVDMWSVGCILGEMLLGKPLFPG----TSTLNQLEKIIEVIGPPSAEDIE 238

Query: 105 -----------YSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                       S+P   R  L         +   LL ++ V +P KR+T  E  +HP+ 
Sbjct: 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYV 298

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 46/172 (26%), Positives = 67/172 (38%), Gaps = 38/172 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           + HRDLK +N L+D  K   LKI D G  ++ S+        + T  Y APEVL    + 
Sbjct: 131 VMHRDLKPQNLLVDKQKG-LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHY 189

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--------PGYVR- 112
               D+WS G     M      F  P D     + +Q++L +   +        PG  + 
Sbjct: 190 STPVDIWSVGCIFAEMSRKQPLF--PGD-----SELQQLLHIFKLLGTPTEQVWPGVSKL 242

Query: 113 --------------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                               +S E   LL ++   DP KRI+      HP+F
Sbjct: 243 RDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 29/170 (17%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L++  +   LK+ DFG +++  + ++  S  V T  Y  P++L    +
Sbjct: 124 KVLHRDLKPQNLLIN--ERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTD 181

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNF---------KTTIQRILS----VH 104
           Y  +I D+W  G   Y M  G   +P    E+  +F         + T   ILS      
Sbjct: 182 YSTQI-DMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240

Query: 105 YSIPGY---------VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL 145
           Y+ P Y          R+  +   LLS++   +  KRI+  E  KHP+F 
Sbjct: 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPA-YIAPEVLS 56
            +  HRDL   N L++      +KI DFG +K           K    +P  + APE L 
Sbjct: 128 QRYIHRDLAARNILVESED--LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR 185

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDP 87
             ++    +DVWS GVTLY +     P + P
Sbjct: 186 TSKFSSA-SDVWSFGVTLYELFTYGDPSQSP 215

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEV--LSRKEYD 61
           HRD+K  N LL  +    +K+ DFG S   +   ++ KS +GTP ++APEV  + RK   
Sbjct: 129 HRDIKGANILL--TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGY 186

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNF----KTTIQRILSVHYSIPGYVRVSLEC 117
            ++ D+W+ G+T   +     P  D    R      K+  Q        +   ++ S   
Sbjct: 187 NQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP-----KLKDKMKWSNSF 241

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
            H +      +P+KR T  ++ +HP+
Sbjct: 242 HHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVL-SRKEY 60
           + HRDLK +N L++  K   LK+ DFG +++  +      + V T  Y  P+VL   K Y
Sbjct: 120 VLHRDLKPQNLLIN--KNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 177

Query: 61  DGKIADVWSCGVTLYVMLVGA---YPFEDPEDP--RNFKT----TIQRILSVHYSIPGYV 111
              I D+WS G     +       +P  D +D   R F+     T +    V   +P Y 
Sbjct: 178 STSI-DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVS-KLPDYK 235

Query: 112 ----------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                           +++   R LL  + V +P +RI+  E  +HP+F
Sbjct: 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 48.5 bits (115), Expect = 6e-07
 Identities = 50/172 (29%), Positives = 73/172 (42%), Gaps = 33/172 (19%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKE 59
            I HRD+K EN L+  +    LK+CDFG++++    S    T  V T  Y +PE+L    
Sbjct: 120 DIVHRDIKPENLLISHNDV--LKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP 177

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL--------SVHYSIPGYV 111
           Y GK  D+WS G  L  +  G  P    E   +   TIQ++L         + YS P + 
Sbjct: 178 Y-GKAVDMWSVGCILGELSDGQ-PLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235

Query: 112 RV---------SLECRH----------LLSRIFVADPEKRITIPEIQKHPWF 144
            +         SLE R+          L+  +   +P  R    +   HP F
Sbjct: 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 24/139 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYS---KSSV-LHSQPKSTVGTPAYIAPEVLSRK 58
             HRDL   N L+        K+ DFG +   K  V L S  K       + APE  S  
Sbjct: 125 SIHRDLAARNILVGEDLV--CKVADFGLARLIKEDVYLSSDKKIPY---KWTAPEAASHG 179

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +  K +DVWS G+ LY +   G  P+       N      +I +  Y +P       +C
Sbjct: 180 TFSTK-SDVWSFGILLYEMFTYGQVPYPG----MNNHEVYDQITA-GYRMP----CPAKC 229

Query: 118 RHLLSRIFV----ADPEKR 132
              + +I +    A+PE R
Sbjct: 230 PQEIYKIMLECWAAEPEDR 248

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLSRK 58
           Q  HRDL   N L+D      +K+ DFG S+  VL  +  S+VG+     +  PEVL   
Sbjct: 120 QFIHRDLAARNCLVDDQGC--VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLLYS 176

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFE 85
           ++  K +DVW+ GV ++ V  +G  P+E
Sbjct: 177 KFSSK-SDVWAFGVLMWEVYSLGKMPYE 203

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 39/177 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204

Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263

Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
               GY    L                  + R LLS++ V D  KRI++ E  +HP+
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 46/187 (24%), Positives = 67/187 (35%), Gaps = 56/187 (29%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--------------STVGTPA 48
           I HRD+K  N L+D      LKI DFG ++       P               + V T  
Sbjct: 136 ILHRDIKAANILID--NQGILKIADFGLAR--PYDGPPPNPKGGGGGGTRKYTNLVVTRW 191

Query: 49  YIAPE-VLSRKEYDGKIADVWSCGVTLYVM---------------------LVGAYPFED 86
           Y  PE +L  + Y   + D+W  G     M                     L G  P E+
Sbjct: 192 YRPPELLLGERRYTTAV-DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT-PTEE 249

Query: 87  --PE-------DPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPE 137
             P        +  +  T   R L   +      ++  E   LLS++   DP KR+T  +
Sbjct: 250 TWPGWRSLPGCEGVHSFTNYPRTLEERFG-----KLGPEGLDLLSKLLSLDPYKRLTASD 304

Query: 138 IQKHPWF 144
             +HP+F
Sbjct: 305 ALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 20/148 (13%)

Query: 1   MQICHRDLKLENTLL-DGSKAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAPE 53
           M++ HRDL   N L+ +G K   +KI DFG S+      S V  S+ +  V    ++A E
Sbjct: 146 MKLVHRDLAARNVLVAEGRK---MKISDFGLSRDVYEEDSYVKRSKGRIPV---KWMAIE 199

Query: 54  VLSRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR 112
            L    Y  + +DVWS GV L+ ++ +G  P+      R F      +L   Y +     
Sbjct: 200 SLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIAPERLFN-----LLKTGYRMERPEN 253

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQK 140
            S E  +L+   +  +P+KR T  +I K
Sbjct: 254 CSEEMYNLMLTCWKQEPDKRPTFADISK 281

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 50/185 (27%), Positives = 75/185 (40%), Gaps = 48/185 (25%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           I HRDLK  N ++  D +    LKI DFG ++++         V T  Y APEV+    Y
Sbjct: 139 IIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 194

Query: 61  DGKIADVWSCGVTLYVMLVGA--YPFEDPED------------PRNF----KTTIQRILS 102
              + D+WS G  +  M+ G   +P  D  D               F    + T++  + 
Sbjct: 195 KENV-DIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVE 253

Query: 103 VHYSIPGYVRVSL-------------------ECRHLLSRIFVADPEKRITIPEIQKHP- 142
                 GY    L                   + R LLS++ V DPEKRI++ +  +HP 
Sbjct: 254 NRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313

Query: 143 ---WF 144
              W+
Sbjct: 314 INVWY 318

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEYDG 62
           HRD+KLEN  L+      L   DFG +       +      VGT A  +PE+L+   Y  
Sbjct: 290 HRDIKLENIFLNCDGKIVLG--DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGY-C 346

Query: 63  KIADVWSCGVTLYVML 78
           +I D+WSCG+ L  ML
Sbjct: 347 EITDIWSCGLILLDML 362

Length = 501

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 141 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 194

Query: 61  DGKIADVWSCGVTLYVMLVGA--YPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 195 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 254

Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 255 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 47/179 (26%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFG----------------YSKSSVLHSQ---PKST 43
           + HRDLK +N LL       + I D+G                  + ++ +S    P   
Sbjct: 134 VLHRDLKPDNILL--GLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKI 191

Query: 44  VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV 103
           VGTP Y+APE L          D+++ GV LY ML  ++P+      R  K    R +S 
Sbjct: 192 VGTPDYMAPERLLGVPASES-TDIYALGVILYQMLTLSFPY------RRKKG---RKISY 241

Query: 104 HYSIPGYVRVS--LECRHLLSRI----FVADPEKRIT-----IPEIQKH-----PWFLK 146
              I   + V+   E    LS+I       DP +R +       +++ H      W +K
Sbjct: 242 RDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVK 300

Length = 932

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 28/151 (18%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLSRKE--- 59
           HRD+K  N LL       +K+ DFG S   +S    +  ++VGTP ++APEV++ ++   
Sbjct: 147 HRDVKGNNILLTTEGG--VKLVDFGVSAQLTSTRLRR-NTSVGTPFWMAPEVIACEQQLD 203

Query: 60  --YDGKIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGY 110
             YD +  DVWS G+T   +  G  P  D          PRN   T+ +        P  
Sbjct: 204 STYDAR-CDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQ--------PEL 254

Query: 111 VRVSLECRHLLSRIFVADPEKRITIPEIQKH 141
              S E    + +    D EKR T+ ++ +H
Sbjct: 255 --WSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 50/172 (29%), Positives = 70/172 (40%), Gaps = 34/172 (19%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKEY 60
           + HRDLK +N L+  S+   LK+ DFG +++  + S+  S  V T  Y  P+VL    EY
Sbjct: 124 VLHRDLKPQNLLI--SERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEY 181

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS----------------VH 104
              + D+W  G   Y M  G   F    D  +    I R+L                   
Sbjct: 182 STSL-DMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240

Query: 105 YSIPGYVRVSLECRH------------LLSRIFVADPEKRITIPEIQKHPWF 144
           YS P Y    L   H            L  +    +P+KRI+  E  KHP+F
Sbjct: 241 YSFPFYPPRPL-INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 39/172 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +   ++    V T  Y APEV+    +  
Sbjct: 138 IIHRDLKPGN--LAVNEDCELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILNWMHYN 193

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG------------- 109
           +  D+WS G  +  ML G   F+     +++   + +IL V   +PG             
Sbjct: 194 QTVDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKV-TGVPGPEFVQKLEDKAAK 248

Query: 110 -YV----------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            Y+                + S +   LL ++   D +KR+T  E  +HP+F
Sbjct: 249 SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKS-SVLHSQPKSTVG-TP-AYIAPEVLSRK 58
           + HRDL   N L+   K P+  KI DFG +K   V   +  +  G  P  ++A E +  +
Sbjct: 130 LVHRDLAARNVLV---KTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR 186

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            Y  K +DVWS GVT++ +M  GA P+E 
Sbjct: 187 IYTHK-SDVWSYGVTVWELMTFGAKPYEG 214

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 37/181 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKST--VGTPAYIAPEVLSRKE 59
           I HRD+K EN  LD  +   L   DFG +     H   P+     GT    +PE+L+   
Sbjct: 206 IIHRDVKTENIFLDEPENAVLG--DFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDP 263

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPF---------------------EDPEDPRNFKTTIQ 98
           Y  K  D+WS G+ L+ M V                             E P+N  T + 
Sbjct: 264 YCAK-TDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLC 322

Query: 99  R-------ILSVHYSIPGYVR---VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           +       +L   Y+IP  +R   + ++  +L++++   D E R +  +I   P F K  
Sbjct: 323 KHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382

Query: 149 P 149
            
Sbjct: 383 I 383

Length = 392

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 47/181 (25%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLS 56
           +I HRD+K  N L+  +K   LK+ DFG +++  L    K       V T  Y  PE+L 
Sbjct: 139 KILHRDMKAANILI--TKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLL 196

Query: 57  RKEYDGKIADVWSCG---------------------VTLYVMLVGA-----YP------- 83
            +   G   D+W  G                     +TL   L G+     +P       
Sbjct: 197 GERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLEL 256

Query: 84  FEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
           F+  E P+  K  ++  L        YV+       L+ ++ V DP KRI       H +
Sbjct: 257 FKKMELPQGQKRKVKERLKP------YVK-DPHALDLIDKLLVLDPAKRIDADTALNHDF 309

Query: 144 F 144
           F
Sbjct: 310 F 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 27/156 (17%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVLSRKEY 60
           HRDL   N LLD  +   +KI DFG +K+      + + +    +P +  A E L  KE 
Sbjct: 130 HRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL--KEN 185

Query: 61  DGKIA-DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ------------RILSVHYSI 107
               A DVWS GVTLY +L      + P  P+ F+  I              +L     +
Sbjct: 186 KFSYASDVWSFGVTLYELLTHCDSKQSP--PKKFEEMIGPKQGQMTVVRLIELLERGMRL 243

Query: 108 PGYVRVSLECRHLLSRIFVADPEKRIT----IPEIQ 139
           P       E   L+   +  + + R T    IP ++
Sbjct: 244 PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 43/170 (25%), Positives = 60/170 (35%), Gaps = 38/170 (22%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEYDG 62
           HRD+K  N LL+     ++K+ DFG ++          T  V T  Y  PE+L  +E  G
Sbjct: 139 HRDIKCSNILLNNKG--QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYG 196

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPE---------------DPRNF-------------- 93
              DVWSCG  L  +      F+  +                P  +              
Sbjct: 197 PAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP 256

Query: 94  KTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
           K   +R L   +S      +      LL  +   DP KR T  E    PW
Sbjct: 257 KKQYRRRLREEFSF-----IPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 5/72 (6%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG- 62
           HRD+K  N LL  +    +K+ DFG + K +   ++ KS +GTP ++APEV + ++  G 
Sbjct: 129 HRDIKGANILL--TDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGY 186

Query: 63  -KIADVWSCGVT 73
            ++ D+W+ G+T
Sbjct: 187 NQLCDIWAVGIT 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 45.6 bits (108), Expect = 6e-06
 Identities = 53/173 (30%), Positives = 74/173 (42%), Gaps = 37/173 (21%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLSR 57
           ++ HRDLK +N L+D      LK+ DFG +++  +   P  T    V T  Y APE+L  
Sbjct: 122 RVLHRDLKPQNLLIDRRTN-ALKLADFGLARAFGI---PVRTFTHEVVTLWYRAPEILLG 177

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPF--EDPEDPRNFKTTIQRILSVHY--------SI 107
             +     D+WS G  ++  +V   P    D E    FK  I RIL            S+
Sbjct: 178 SRHYSTPVDIWSVGC-IFAEMVNQKPLFPGDSEIDELFK--IFRILGTPNEETWPGVTSL 234

Query: 108 PGY--------------VRVSLECR--HLLSRIFVADPEKRITIPEIQKHPWF 144
           P Y              V  +LE     LLS++   DP KRIT     +H +F
Sbjct: 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYF 287

Length = 294

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 45.8 bits (108), Expect = 6e-06
 Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 35/172 (20%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L++  +   LK+ DFG +++  + ++  S  V T  Y  P+VL    E
Sbjct: 124 KVLHRDLKPQNLLIN--ERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSE 181

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRILSV-------------- 103
           Y  +I D+W  G   + M  G   +P    ED  +    I R+L                
Sbjct: 182 YSTQI-DMWGVGCIFFEMASGRPLFPGSTVEDELHL---IFRLLGTPTEETWPGISSNDE 237

Query: 104 --HYSIPGYV---------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             +Y+ P Y          R+  E   LL++    + +KRI+  E  KH +F
Sbjct: 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLSR 57
           ++ HRDLK +N L++   A  +K+ DFG +++  +   P  T    V T  Y APE+L  
Sbjct: 120 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGV---PVRTYTHEVVTLWYRAPEILLG 174

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPRNFKTTIQRILSV------------- 103
            +Y     D+WS G     M+     F  D E  + F+  I R L               
Sbjct: 175 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR--IFRTLGTPDEVVWPGVTSLP 232

Query: 104 --HYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               S P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 45.5 bits (107), Expect = 9e-06
 Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 39/177 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 140 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 197

Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 198 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256

Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
               G     L                  + R LLS++ V DP KRI++ E  +HP+
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLSRKEYD 61
           HRD+K EN L+  +K  ++K+CDFG+++  +L          V T  Y APE+L      
Sbjct: 123 HRDVKPENILI--TKQGQIKLCDFGFAR--ILTGPGDDYTDYVATRWYRAPELLVGDTQY 178

Query: 62  GKIADVWSCGVTLYVMLVG 80
           G   DVW+ G     +L G
Sbjct: 179 GPPVDVWAIGCVFAELLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 48/168 (28%), Positives = 67/168 (39%), Gaps = 34/168 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN L+  +   ++K+ DFG ++           V T  Y APEVL +  Y  
Sbjct: 129 IVHRDLKPENILV--TSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYAT 186

Query: 63  KIADVWSCGVTLYVM---------------------LVGAYPFED-PED---PR-NFKTT 96
            + D+WS G     M                     L+G  P +D P D   PR  F   
Sbjct: 187 PV-DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPR 245

Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             R   V   +P       +   LL  +   +P KRI+     +HP+F
Sbjct: 246 GPR--PVQSVVPEIEESGAQ---LLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAY-IAPEVLSR 57
           Q  HRDL   N L++     ++KI DFG +K+     +    K  + +P +  APE L +
Sbjct: 129 QYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ 186

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSV---HYSI 107
            ++    +DVWS GVTLY +L        P         P + + T+ R++ V      +
Sbjct: 187 SKF-YIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL 245

Query: 108 PGYVRVSLECRHLLSRIFVADPEKRIT 134
           P       E   L+ + +   P KR T
Sbjct: 246 PRPPNCPEEVYQLMRKCWEFQPSKRTT 272

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 45/172 (26%), Positives = 66/172 (38%), Gaps = 37/172 (21%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPE-VLSRKE 59
           HRDLK  N  ++ ++   LKI DFG ++    H   K      + T  Y +P  +LS   
Sbjct: 137 HRDLKPANVFIN-TEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNN 195

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPED-----------PRNFKTTIQRILSVHYSIP 108
           Y  K  D+W+ G     ML G   F    +           P   +     +L+V   IP
Sbjct: 196 YT-KAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNV---IP 251

Query: 109 GYVR----------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +VR                V+ E    L +I   +P  R+T  E   HP+ 
Sbjct: 252 SFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 31/170 (18%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEV-LSRKE 59
           +I HRDLK +N L++  +   LK+ DFG +++  + ++  S  V T  Y  P+V L   E
Sbjct: 123 KILHRDLKPQNLLIN--EKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTE 180

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV---------------- 103
           Y   I D+W  G  LY M  G   F            I R+L                  
Sbjct: 181 YSTPI-DMWGVGCILYEMATGRPMFPGSTVKEELH-LIFRLLGTPTEETWPGITSNEEFR 238

Query: 104 HYSIPGYV---------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            Y  P Y          R+  +   LLS + + + + RI+     +H +F
Sbjct: 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 19/110 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKIC--DFGY------SKSSVLHSQPKSTVGTPAYIAPEV 54
           I HRD+K EN L++G +     IC  DFG       S S+  H     TV T    APEV
Sbjct: 281 IIHRDIKTENVLVNGPE----DICLGDFGAACFARGSWSTPFHYGIAGTVDTN---APEV 333

Query: 55  LSRKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDP--RNFKTTIQRIL 101
           L+   Y   + D+WS G+ ++   V  A  F        R +   I RI+
Sbjct: 334 LAGDPYTPSV-DIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRII 382

Length = 461

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 43.4 bits (102), Expect = 3e-05
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKE 59
            I HRDLK +N L+  S    LK+ DFG +++  + SQ  S+ V T  Y  P+VL    +
Sbjct: 123 HILHRDLKPQNLLI--SYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATD 180

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPF 84
           Y   + D+W  G     ML G   F
Sbjct: 181 YSSAL-DIWGAGCIFIEMLQGQPAF 204

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 45/204 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  ++  +   L+I DFG ++ +    +    V T  Y APE++    +  
Sbjct: 139 IIHRDLKPSNVAVN--EDCELRILDFGLARQA--DDEMTGYVATRWYRAPEIMLNWMHYN 194

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH--- 119
           +  D+WS G  +  +L G   F  P +  ++   ++RI+ V  +    V   +   H   
Sbjct: 195 QTVDIWSVGCIMAELLKGKALF--PGN--DYIDQLKRIMEVVGTPSPEVLKKISSEHARK 250

Query: 120 --------------------------LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM 153
                                     LL ++ V D +KRI+  E   HP+F      ++ 
Sbjct: 251 YIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYF-----SQYH 305

Query: 154 E-EDEGSMQKGDENDQSQ--SIEE 174
           + EDE   +  DE+ +++  +IEE
Sbjct: 306 DPEDEPEAEPYDESPENKERTIEE 329

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 11/101 (10%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYD 61
           HRDL   N L+   K   +KICDFG ++  +  S      ST     ++APE +    Y 
Sbjct: 262 HRDLAARNVLICEGKL--VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYT 319

Query: 62  GKIADVWSCGVTLY-VMLVGAYPFEDPEDPRN--FKTTIQR 99
             ++DVWS G+ L+ +  +G  P+  PE P N  F   I+R
Sbjct: 320 -TLSDVWSFGILLWEIFTLGGTPY--PELPMNEQFYNAIKR 357

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 24/145 (16%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFG-----YSK---SSVLHSQPKSTVGTPAYIAPEVLS 56
           HRDL   N +LD S    +K+ DFG     Y K   S   H+  K  V    ++A E L 
Sbjct: 121 HRDLAARNCMLDESFT--VKVADFGLARDIYDKEYYSVHNHTGAKLPV---KWMALESLQ 175

Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGA--YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRV 113
            +++  K +DVWS GV L+ +M  GA  YP  D  D   +    +R+L   Y       V
Sbjct: 176 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEV 234

Query: 114 SLECRHLLSRIFVADPEKRITIPEI 138
            L C H         PE R T  E+
Sbjct: 235 MLSCWH-------PKPEMRPTFSEL 252

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 11/79 (13%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-----SQPKSTVGTP-AYIAPEVLSRK 58
           HRDL   N LL  +   ++KI DFG  ++   +      +    V  P A+ APE L  +
Sbjct: 120 HRDLAARNILL--ASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV--PFAWCAPESLRTR 175

Query: 59  EYDGKIADVWSCGVTLYVM 77
            +    +DVW  GVTL+ M
Sbjct: 176 TFS-HASDVWMFGVTLWEM 193

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 42.1 bits (99), Expect = 9e-05
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 11/138 (7%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPA-YIAPEVLSRKEYD 61
           HRDL   N LL   K   +KICDFG ++  +  S    K     P  ++APE +    Y 
Sbjct: 164 HRDLAARNVLLTHGKI--VKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYT 221

Query: 62  GKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            + +DVWS G+ L+ +  +G+ P+        F   I+      Y +        E   +
Sbjct: 222 FE-SDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE----GYRMAQPEHAPAEIYDI 276

Query: 121 LSRIFVADPEKRITIPEI 138
           +   + ADP KR T  +I
Sbjct: 277 MKTCWDADPLKRPTFKQI 294

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  Y 
Sbjct: 130 RVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 187

Query: 62  GKIADVWSCGVTLYVML 78
             + D+WS G     M 
Sbjct: 188 TPV-DLWSVGCIFAEMF 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKIC--DFGYSKSSVLHSQPK--STVGTPAYIAPEVLSR 57
           +I HRD+K EN  ++        +C  DFG +   V  +  K     GT A  APE+L+R
Sbjct: 202 RIIHRDIKAENIFINHPG----DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR 257

Query: 58  KEYDGKIADVWSCGVTLYVMLVG 80
             Y G   D+WS G+ L+ M   
Sbjct: 258 DPY-GPAVDIWSAGIVLFEMATC 279

Length = 391

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 41/179 (22%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK----STVGTPAYIAPEVLSR--K 58
           HRDLK +N L +     +LKICDFG ++ +   +         V T  Y APE+      
Sbjct: 126 HRDLKPKNILANAD--CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 183

Query: 59  EYDGKIADVWSCGVTLYVMLVGA--YPFED------------------------PEDPRN 92
           +Y   I D+WS G     +L G   +P ++                         E  R 
Sbjct: 184 KYTPAI-DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARR 242

Query: 93  FKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           + +++++   V +S   P    ++L    LL R+   DP+ R T  E    P+F K L 
Sbjct: 243 YLSSMRKKQPVPFSQKFPNADPLALR---LLERLLAFDPKDRPTAEEALADPYF-KGLA 297

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 34/171 (19%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L+D      +K+ DFG +++  +  +  +  V T  Y APEVL     
Sbjct: 121 RVLHRDLKPQNLLIDNKGV--IKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPR 178

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPF--EDPEDPRNFKTTIQRILSVH--------YSIPG 109
           Y   + D+WS G T++  +    P    D E  + F+  I RIL            S+P 
Sbjct: 179 YSTPV-DIWSIG-TIFAEMATKKPLFHGDSEIDQLFR--IFRILGTPTEDVWPGVTSLPD 234

Query: 110 YVR----------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           Y                  +  +   LL ++ + DP KRI+  +   HP+F
Sbjct: 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 16/140 (11%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVG-TPA-YIAPEVLSRKE 59
           HRDL   N L+  ++   +KI DFG ++   +H      K+T G  P  ++APE L  + 
Sbjct: 155 HRDLAARNVLV--TEDHVMKIADFGLARD--IHHIDYYRKTTNGRLPVKWMAPEALFDRV 210

Query: 60  YDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
           Y  + +DVWS GV L+ +  +G  P+        FK     +L   Y +      + E  
Sbjct: 211 YTHQ-SDVWSFGVLLWEIFTLGGSPYPGIPVEELFK-----LLKEGYRMEKPQNCTQELY 264

Query: 119 HLLSRIFVADPEKRITIPEI 138
           HL+   +   P +R T  ++
Sbjct: 265 HLMRDCWHEVPSQRPTFKQL 284

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFG---------YSKSSVLHSQP-KSTVGTPAYIAPEV 54
           HRDL   N L+  +    LKI DFG         Y+ S  L   P K T       APE 
Sbjct: 116 HRDLAARNCLVGENNV--LKISDFGMSREEEGGIYTVSDGLKQIPIKWT-------APEA 166

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRV 113
           L+   Y  + +DVWS G+ L+    +G  P+    + +    T +RI S  Y +P     
Sbjct: 167 LNYGRYTSE-SDVWSYGILLWETFSLGDTPYPGMSNQQ----TRERIES-GYRMPAPQLC 220

Query: 114 SLECRHLLSRIFVADPEKRITIPEIQK 140
             E   L+ + +  DPE R +  EI  
Sbjct: 221 PEEIYRLMLQCWAYDPENRPSFSEIYN 247

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPA-YIAPEVLSRKEY 60
              HRDL   N L+        K+ DFG +K +   SQ + +   P  + APE L  K++
Sbjct: 122 NFVHRDLAARNVLVSEDLVA--KVSDFGLAKEA---SQGQDSGKLPVKWTAPEALREKKF 176

Query: 61  DGKIADVWSCGVTLY 75
             K +DVWS G+ L+
Sbjct: 177 STK-SDVWSFGILLW 190

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTP----AYIAPEVLSRKEY 60
           HRDL   N LL   K   +KICDFG ++  ++H     + G+      ++APE +    Y
Sbjct: 260 HRDLAARNVLLAQGKI--VKICDFGLAR-DIMHDSNYVSKGSTFLPVKWMAPESIFDNLY 316

Query: 61  DGKIADVWSCGVTLY-VMLVGAYPF 84
              ++DVWS G+ L+ +  +G  P+
Sbjct: 317 T-TLSDVWSYGILLWEIFSLGGTPY 340

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGT--P-AYIAPEVLSRKEY 60
           HRDL   N LL      + KI DFG S++        ++T     P  + APE ++  ++
Sbjct: 118 HRDLAARNVLLVNRH--QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKF 175

Query: 61  DGKIADVWSCGVTLYVML-VGAYPFED 86
             K +DVWS GVTL+     GA P+ +
Sbjct: 176 SSK-SDVWSYGVTLWEAFSYGAKPYGE 201

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 45/211 (21%), Positives = 66/211 (31%), Gaps = 73/211 (34%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-----------HSQPK----STVGTP 47
             HRDL   N  ++       KI DFG ++                 Q +    S V T 
Sbjct: 140 FMHRDLSPANIFIN--SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTL 197

Query: 48  AYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA--YPFED--------------PED-- 89
            Y APE+L   E      D+WS G     +L G   +P E+              P +  
Sbjct: 198 WYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDN 257

Query: 90  -----------------PRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKR 132
                            P++ KT                  S +   LL  +   +P +R
Sbjct: 258 WPQAKKLPLYTEFTPRKPKDLKTIFP-------------NASDDAIDLLQSLLKLNPLER 304

Query: 133 ITIPEIQKHPWFL--------KNLPIEFMEE 155
           I+  E  KH +F           LP  F+ +
Sbjct: 305 ISAKEALKHEYFKSDPLPCDPSQLPFNFLTK 335

Length = 335

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 3  ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEY 60
          +C + L     L   +K+  + +   G  K     +   P+ +   P ++APEV+  + Y
Sbjct: 22 VCLQCLGALRELHRQAKSGNILLTWDGLLKLDGSVAFKTPEQSRPDPYFMAPEVIQGQSY 81

Query: 61 DGKIADVWSCGVTLYVML 78
            K AD++S G+TLY  L
Sbjct: 82 TEK-ADIYSLGITLYEAL 98

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I HRDLK +N L+  S    LK+ DFG +++  + S   S  V T  Y  P+VL      
Sbjct: 124 ILHRDLKPQNLLI--SDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEY 181

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV 103
               D+W  G     M+ G   F   +D    +  ++RI  V
Sbjct: 182 STCLDMWGVGCIFVEMIQGVAAFPGMKD---IQDQLERIFLV 220

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 53/192 (27%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQP-------KSTVGTPAYIAPE 53
           + HRDLK  N L+  +G +  R+KI D G+++   L + P          V T  Y APE
Sbjct: 129 VLHRDLKPANILVMGEGPERGRVKIADMGFAR---LFNSPLKPLADLDPVVVTFWYRAPE 185

Query: 54  VLSRKEYDGKIADVWSCGVTLYVML-----------------------------VGAYPF 84
           +L    +  K  D+W+ G     +L                             V  +P 
Sbjct: 186 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPA 245

Query: 85  E-DPEDPRNF-----------KTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKR 132
           + D ED +             + T      + Y     V+   +  HLL ++   DP KR
Sbjct: 246 DKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 305

Query: 133 ITIPEIQKHPWF 144
           IT  +  + P+F
Sbjct: 306 ITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.4 bits (92), Expect = 7e-04
 Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 25/93 (26%)

Query: 2   QIC------------HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS--TVGTP 47
           QIC            HRDL   N L++     R+KI DFG +K   +  Q K    V  P
Sbjct: 116 QICKGMEYLGSKRYVHRDLATRNILVESEN--RVKIGDFGLTK---VLPQDKEYYKVREP 170

Query: 48  A-----YIAPEVLSRKEYDGKIADVWSCGVTLY 75
                 + APE L+  ++    +DVWS GV LY
Sbjct: 171 GESPIFWYAPESLTESKFS-VASDVWSFGVVLY 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGT-----PA-YIAPEV 54
           M   HRDL   N L+  +     K+ DFG S+   L    ++T  T     P  + APE 
Sbjct: 125 MNYVHRDLAARNILV--NSNLVCKVSDFGLSR--RLED-SEATYTTKGGKIPIRWTAPEA 179

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           ++ +++    +DVWS G+ ++ VM  G  P+ D
Sbjct: 180 IAYRKFTSA-SDVWSFGIVMWEVMSYGERPYWD 211

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 39.3 bits (91), Expect = 9e-04
 Identities = 48/192 (25%), Positives = 72/192 (37%), Gaps = 53/192 (27%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQP-------KSTVGTPAYIAPE 53
           + HRDLK  N L+  +G +  R+KI D G+++   L + P          V T  Y APE
Sbjct: 129 VLHRDLKPANILVMGEGPERGRVKIADMGFAR---LFNSPLKPLADLDPVVVTFWYRAPE 185

Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVGAYPF----EDPEDPRNF-KTTIQRILSVH---- 104
           +L    +  K  D+W+ G     +L     F    ED +    F    + RI SV     
Sbjct: 186 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPA 245

Query: 105 -------YSIPGYVRVSLECRH-------------------------LLSRIFVADPEKR 132
                    +P Y  +  + R                          LL ++   DP KR
Sbjct: 246 DKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKR 305

Query: 133 ITIPEIQKHPWF 144
           IT  +  + P+F
Sbjct: 306 ITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGT--PA-YIAPEVLSRKE 59
             HRDL   N ++       +KI DFG ++        +       P  ++APE L    
Sbjct: 140 FVHRDLAARNCMVAEDLT--VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV 197

Query: 60  YDGKIADVWSCGVTLYVML-VGAYPF 84
           +  K +DVWS GV L+ M  +   P+
Sbjct: 198 FTTK-SDVWSFGVVLWEMATLAEQPY 222

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS---SVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + H+D+   N ++D     ++KI D   S+       H    +      ++A E L  KE
Sbjct: 138 VIHKDIAARNCVIDEEL--QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKE 195

Query: 60  YDGKIADVWSCGVTLY-VMLVGAYPFED 86
           Y    +DVWS GV L+ +M +G  P+ +
Sbjct: 196 YSSA-SDVWSFGVLLWELMTLGQTPYVE 222

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 22/151 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVG--TPAYI---APEVL 55
           +   HRDL   N L+   K   +KI DFG S++  L+S     V    P  I   A E +
Sbjct: 149 LNFVHRDLATRNCLVG--KNYTIKIADFGMSRN--LYSSDYYRVQGRAPLPIRWMAWESV 204

Query: 56  SRKEYDGKIADVWSCGVTLY--VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRV 113
              ++  K +DVW+ GVTL+  + L    P+E   D +     I+            + +
Sbjct: 205 LLGKFTTK-SDVWAFGVTLWEILTLCREQPYEHLTDQQ----VIENAGHFFRDDGRQIYL 259

Query: 114 SL------ECRHLLSRIFVADPEKRITIPEI 138
                   +   L+   +  D E R T  EI
Sbjct: 260 PRPPNCPKDIYELMLECWRRDEEDRPTFREI 290

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPA-YIAPEVLSRKEY 60
           ++ HRDL   N L+  S+    K+ DFG ++   + S        P  + APE L  K++
Sbjct: 120 KLVHRDLAARNILV--SEDGVAKVSDFGLAR---VGSMGVDNSKLPVKWTAPEALKHKKF 174

Query: 61  DGKIADVWSCGVTLY-VMLVGAYPF 84
             K +DVWS GV L+ V   G  P+
Sbjct: 175 SSK-SDVWSYGVLLWEVFSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 10/87 (11%)

Query: 3   ICHRDLKLENTLLDGSK-APRLKICDFGYSK-----SSVLHSQPKST---VGTPAYIAPE 53
           I HRDLK +N ++  +   P  K+ DFG             +    T   +GTP Y APE
Sbjct: 100 IVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPE 159

Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVG 80
            L R E     +D+++ G+     L G
Sbjct: 160 QL-RGEPVTPNSDLYAWGLIFLECLTG 185

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 17/141 (12%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPA-YIAPEVLSRKEYD 61
           HRDL   N LL   +    KICDFG ++     S    K     P  ++APE +    Y 
Sbjct: 237 HRDLAARNILLTHGRIT--KICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYT 294

Query: 62  GKIADVWSCGVTLYVML-VGAYPFED-PEDPRNFKTTIQ--RILSVHYSIPGYVRVSLEC 117
            + +DVWS G+ L+ +  +G+ P+   P D + +K   +  R+LS   +         E 
Sbjct: 295 FE-SDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPS-------EM 346

Query: 118 RHLLSRIFVADPEKRITIPEI 138
             ++   + ADP KR T  +I
Sbjct: 347 YDIMKSCWDADPLKRPTFKQI 367

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 13/139 (9%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLSRKEYD 61
           HRDL+  N L+  S++   KI DFG ++  +  ++  +  G      + APE ++   + 
Sbjct: 126 HRDLRAANVLV--SESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAINFGSFT 182

Query: 62  GKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            K +DVWS G+ LY ++  G  P+     P    + +   L   Y +P       E   +
Sbjct: 183 IK-SDVWSFGILLYEIVTYGKIPY-----PGMSNSDVMSALQRGYRMPRMENCPDELYDI 236

Query: 121 LSRIFVADPEKRITIPEIQ 139
           +   +    E+R T   +Q
Sbjct: 237 MKTCWKEKAEERPTFDYLQ 255

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	225
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.98
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.98
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.98
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.97
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.97
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.96
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.96
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.96
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.96
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.96
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
PHA03212	391	serine/threonine kinase US3; Provisional	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.96
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
PHA03207	392	serine/threonine kinase US3; Provisional	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.95
PHA03210	501	serine/threonine kinase US3; Provisional	99.95
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.95
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.95
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
PTZ00267	478	NIMA-related protein kinase; Provisional	99.95
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.95
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.95
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.95
KOG0589	426	consensus Serine/threonine protein kinase [General	99.95
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.95
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.95
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.95
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.95
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.95
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
PHA02988	283	hypothetical protein; Provisional	99.94
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.94
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.94
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.94
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
PHA02882	294	putative serine/threonine kinase; Provisional	99.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.94
KOG0586	596	consensus Serine/threonine protein kinase [General	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.94
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.94
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.94
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.94
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.94
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.94
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.94
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.94
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.94
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.94
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.94
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.93
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.93
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.93
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.93
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.93
KOG0584	632	consensus Serine/threonine protein kinase [General	99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.93
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.93
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.93
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.93
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.93
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.93
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.93
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.93
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.93
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.93
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.93
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.93
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.93
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.93
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.93
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.93
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.93
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.93
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.93
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.93
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.93
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.93
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.93
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.93
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.92
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.92
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.92
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.92
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.92
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.92
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.92
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.92
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.92
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.92
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.92
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.92
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.92
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.92
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.92
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.92
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.92
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.92
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.92
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.92
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.92
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.92
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.92
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.92
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.92
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.91
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.91
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.91
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.91
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.91
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.91
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.91
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.91
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.91
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.91
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.91
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.91
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.91
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.91
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.91
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.91
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.91
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.91
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.91
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.91
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.91
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.91
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.91
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.91
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.91
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.91
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.91
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.91
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.91
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.91
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.91
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.91
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.91
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.91
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.91
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.91
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.91
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.91
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.91
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.91
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.91
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.91
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.9
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.9
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.9
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.9
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.9
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.9
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.9
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.9
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.9
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.9
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.9
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.9
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.9
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.9
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.9
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.9
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.9
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.9
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.9
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.9
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.89
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.89
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.89
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.89
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.87
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.87
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.87
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.87
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.86
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.86
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.86
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.85
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.83
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.83
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.8
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.8
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.8
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.79
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.78
KOG3653	534	consensus Transforming growth factor beta/activin	99.78
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.77
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.76
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.75
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.73
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.73
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.72
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.7
KOG1152	772	consensus Signal transduction serine/threonine kin	99.68
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.65
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.62
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.58
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.57
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.55
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.51
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.45
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.45
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.26
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.14
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.14
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.09
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.06
PRK12274	218	serine/threonine protein kinase; Provisional	99.03
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.92
PRK09188	365	serine/threonine protein kinase; Provisional	98.9
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.86
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.81
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.6
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.42
COG4248	637	Uncharacterized protein with protein kinase and he	98.37
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.15
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.13
smart00090	237	RIO RIO-like kinase.	97.99
PRK10345	210	hypothetical protein; Provisional	97.9
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.71
PRK14879	211	serine/threonine protein kinase; Provisional	97.64
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.63
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.59
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.59
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.42
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.28
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.25
KOG1243	690	consensus Protein kinase [General function predict	97.22
KOG3087	229	consensus Serine/threonine protein kinase [General	96.69
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.65
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	96.62
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.59
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.35
PRK05231	319	homoserine kinase; Provisional	95.87
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.62
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.49
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	95.39
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	95.2
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.15
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.09
PF01636	239	APH: Phosphotransferase enzyme family This family	95.09
PRK10271	188	thiK thiamine kinase; Provisional	94.93
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	94.8
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.68
KOG1093	725	consensus Predicted protein kinase (contains TBC a	94.64
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	94.62
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	94.57
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	94.46
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.45
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	94.37
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.17
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	93.94
COG2334	331	Putative homoserine kinase type II (protein kinase	93.55
PRK06148	1013	hypothetical protein; Provisional	93.47
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	93.38
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	93.27
KOG1290	590	consensus Serine/threonine protein kinase [Signal	93.26
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.2
PLN02236	344	choline kinase	93.05
PHA03111	444	Ser/Thr kinase; Provisional	92.93
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	92.51
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	92.49
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	92.39
PRK09902	216	hypothetical protein; Provisional	92.34
PRK11768	325	serine/threonine protein kinase; Provisional	92.32
PRK09550	401	mtnK methylthioribose kinase; Reviewed	91.45
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.33
PRK06149	972	hypothetical protein; Provisional	90.85
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	90.84
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	90.63
PRK12396	409	5-methylribose kinase; Reviewed	90.62
KOG1235	538	consensus Predicted unusual protein kinase [Genera	89.6
PLN02876	822	acyl-CoA dehydrogenase	87.76
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	86.2
PRK10593	297	hypothetical protein; Provisional	85.46
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	83.29
PLN02756	418	S-methyl-5-thioribose kinase	83.27
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	81.07
KOG2268	465	consensus Serine/threonine protein kinase [Signal	80.66

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-39  Score=254.86  Aligned_cols=142  Identities=32%  Similarity=0.542  Sum_probs=121.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .+||||||||+|||++..+  .|||||||+++..... ...+++||..|||||.+.+..|+.+ +||||||++++|+++|
T Consensus       198 ~~IIHRDIKPsNlLvNskG--eVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~-sDIWSLGLsllE~a~G  273 (364)
T KOG0581|consen  198 RKIIHRDIKPSNLLVNSKG--EVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVK-SDIWSLGLSLLELAIG  273 (364)
T ss_pred             cCeeeccCCHHHeeeccCC--CEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcc-cceecccHHHHHHhhC
Confidence            4799999999999998877  7999999999876555 6688899999999999999999877 9999999999999999


Q ss_pred             CCCCCCC-CChhHHHHHHHHHhccc-ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDP-EDPRNFKTTIQRILSVH-YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++||... .....+...+..+.... ...|. ..+|+++++||..||++||.+|||+.|+++|||+++.
T Consensus       274 rfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~-~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  274 RFPYPPPNPPYLDIFELLCAIVDEPPPRLPE-GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF  341 (364)
T ss_pred             CCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc-ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence            9999875 22345566666666633 33333 2599999999999999999999999999999999864

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.4e-38  Score=252.64  Aligned_cols=144  Identities=40%  Similarity=0.599  Sum_probs=119.7

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCcc--CCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY--DGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~--~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.+ ....+||+|||+|+........++.+|||.|.|||++.++.+  +..++|+||+||++|.+
T Consensus       295 ~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvc  374 (475)
T KOG0615|consen  295 QGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVC  374 (475)
T ss_pred             cCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEE
Confidence            589999999999999766 333699999999999888888899999999999999986553  44458999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++|.+||........+.   +.+....+  ..+.+..++.++++||.+||..||++|||+.++|+||||+..
T Consensus       375 LsG~pPFS~~~~~~sl~---eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  375 LSGYPPFSEEYTDPSLK---EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             eccCCCcccccCCccHH---HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence            99999998765543233   33444433  334566899999999999999999999999999999999743

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.9e-36  Score=248.00  Aligned_cols=138  Identities=37%  Similarity=0.685  Sum_probs=123.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||||||||..|+|++.+.  +|||+|||+|...... ....+.+|||.|.|||++.....+.. +||||+||+||.||.
T Consensus       137 ~~IiHRDLKLGNlfL~~~~--~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfE-vDiWSlGcvmYtLL~  213 (592)
T KOG0575|consen  137 LGIIHRDLKLGNLFLNENM--NVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFE-VDIWSLGCVMYTLLV  213 (592)
T ss_pred             cCceecccchhheeecCcC--cEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCc-hhhhhhhhHHHhhhh
Confidence            4899999999999999887  7999999999877654 56677899999999999997777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |++||+.    ..+..+..++....+..|.  .++.++++||.+||..+|.+|||+++||.|+||++.
T Consensus       214 G~PPFet----k~vkety~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  214 GRPPFET----KTVKETYNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             CCCCccc----chHHHHHHHHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence            9999986    4567777888888888887  599999999999999999999999999999999654

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-36  Score=235.20  Aligned_cols=138  Identities=39%  Similarity=0.648  Sum_probs=115.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC-CCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-LHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++..+  +++|+|||+++... ......+.+||+.|||||++.+.+|+.. +|+||||+++|+|++
T Consensus       144 ~gIiyRDlKPENILLd~~G--Hi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~-vDWWsLGillYeML~  220 (357)
T KOG0598|consen  144 KGIIYRDLKPENILLDEQG--HIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKA-VDWWSLGILLYEMLT  220 (357)
T ss_pred             CCeeeccCCHHHeeecCCC--cEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcc-cchHhHHHHHHHHhh
Confidence            6999999999999999877  89999999998543 3445566799999999999999998755 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC----CHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI----TIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~----s~~eil~hp~~~~  146 (225)
                      |.+||...+.    .....++.......++ .-++.++++|++++|..+|.+|.    .+.+|.+||||..
T Consensus       221 G~pPF~~~~~----~~~~~~I~~~k~~~~p-~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  221 GKPPFYAEDV----KKMYDKILKGKLPLPP-GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             CCCCCcCccH----HHHHHHHhcCcCCCCC-ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence            9999988554    3455555555422221 23899999999999999999996    6899999999975

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-35  Score=243.01  Aligned_cols=137  Identities=36%  Similarity=0.640  Sum_probs=117.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--------------CCCcccCCCCCccccccCCccCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--------------PKSTVGTPAYIAPEVLSRKEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--------------~~~~~g~~~y~aPE~l~~~~~~~~~~D   66 (225)
                      +|||||||||+|||++.++  ++||+|||.|+.+.....              ..+++||-.|.+||+|........ +|
T Consensus       193 ~GIIHRDlKPENILLd~dm--hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~-sD  269 (604)
T KOG0592|consen  193 NGIIHRDLKPENILLDKDG--HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPS-SD  269 (604)
T ss_pred             cCceeccCChhheeEcCCC--cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcc-cc
Confidence            5999999999999999888  899999999985432211              145789999999999987776555 99


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||+||||+|+|+.|.+||.+.+.    ..++++++...+.+|.  .+++.+++||+++|..||.+|+|+++|.+||||..
T Consensus       270 iWAlGCilyQmlaG~PPFra~Ne----yliFqkI~~l~y~fp~--~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~  343 (604)
T KOG0592|consen  270 LWALGCILYQMLAGQPPFRAANE----YLIFQKIQALDYEFPE--GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG  343 (604)
T ss_pred             hHHHHHHHHHHhcCCCCCccccH----HHHHHHHHHhcccCCC--CCCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence            99999999999999999988655    4667777888887776  48999999999999999999999999999999975

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-35  Score=248.46  Aligned_cols=141  Identities=41%  Similarity=0.774  Sum_probs=130.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .+|+||||||+|+|++..+  .+||+|||+|..........+.||+|+|.|||++.+.+|.+.++||||.|||||.||+|
T Consensus       131 ~~icHRDLKpENlLLd~~~--nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG  208 (786)
T KOG0588|consen  131 FNICHRDLKPENLLLDVKN--NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTG  208 (786)
T ss_pred             hcceeccCCchhhhhhccc--CEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhC
Confidence            4799999999999999877  59999999999888888888999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      +.||.+    +++..+..++....+.+|.  .++.++++||++||.+||.+|+|.++|++|||+.....
T Consensus       209 ~LPFdD----dNir~LLlKV~~G~f~MPs--~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  209 KLPFDD----DNIRVLLLKVQRGVFEMPS--NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             CCCCCC----ccHHHHHHHHHcCcccCCC--cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence            999985    6677888889999999885  59999999999999999999999999999999986533

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-35  Score=241.08  Aligned_cols=140  Identities=50%  Similarity=0.815  Sum_probs=124.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCC-CCCCCCCCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-VLHSQPKSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+|||++.+. +.+||+|||++... .......+.+||+.|+|||++.+.. |.++++||||+|+++|.|+
T Consensus       139 ~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml  217 (370)
T KOG0583|consen  139 RGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLL  217 (370)
T ss_pred             CCEeeCCCCHHHEEecCCC-CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHH
Confidence            5899999999999999873 37999999999877 4667778899999999999999988 9989999999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +|+.||...+.    .....++....+.+|.+.. |++++.|+++||..+|.+|+|+.++++||||+.
T Consensus       218 ~G~~PF~d~~~----~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  218 CGRLPFDDSNV----PNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             hCCCCCCCccH----HHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            99999987443    4555567788888887633 999999999999999999999999999999997

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-35  Score=226.97  Aligned_cols=140  Identities=36%  Similarity=0.642  Sum_probs=119.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC-----CccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~il~   75 (225)
                      ++||||||||+|||++++.  ++||+|||+|++..........+|||+|+|||.+..     .+.+++.+|+||+|+|||
T Consensus       142 ~~IVHRDLKpENILlddn~--~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImy  219 (411)
T KOG0599|consen  142 RNIVHRDLKPENILLDDNM--NIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMY  219 (411)
T ss_pred             hhhhhcccChhheeecccc--ceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHH
Confidence            4799999999999999888  699999999999988888888899999999999853     233355699999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhccc--ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVH--YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      .|+.|.+||.+..    ..-..+.++...  +..|.+.+++...++||++||++||.+|+|++|+|+||||.+
T Consensus       220 TLLaGcpPFwHRk----QmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  220 TLLAGCPPFWHRK----QMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             HHHcCCCchhHHH----HHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            9999999997632    233444555544  456778889999999999999999999999999999999954

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-35  Score=220.02  Aligned_cols=142  Identities=38%  Similarity=0.682  Sum_probs=118.4

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||||||+||+|+|+-+. ...-|||+|||+|............+|||+|||||++...+|... +|||+.|+++|-|+.
T Consensus       129 n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kp-vDiW~cGViLfiLL~  207 (355)
T KOG0033|consen  129 NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLV  207 (355)
T ss_pred             cCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCc-chhhhhhHHHHHHHh
Confidence            489999999999999532 223599999999998775555556789999999999998888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |++||.+....    .+.++++...+.  .|.+.++++++++|+++||..||.+|+|+.|+|+|||+.+.
T Consensus       208 G~~PF~~~~~~----rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  208 GYPPFWDEDQH----RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             CCCCCCCccHH----HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence            99999885543    444555555444  45677899999999999999999999999999999999864

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=3.5e-35  Score=226.76  Aligned_cols=143  Identities=27%  Similarity=0.466  Sum_probs=117.1

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      ++|||||||+||||+.++  .+||||||+|+.... ......++.|.+|+|||.+.+...+++.+||||+||++.||++|
T Consensus       121 n~IHRDIKPENILit~~g--vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G  198 (396)
T KOG0593|consen  121 NCIHRDIKPENILITQNG--VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTG  198 (396)
T ss_pred             CeecccCChhheEEecCC--cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcC
Confidence            799999999999998887  799999999998774 34444568999999999999865556669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc---------------ccCC----------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH---------------YSIP----------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~---------------~~~~----------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      .+.|.+.++.+++..+...+....               ..+|          .++.++..+.+|+++||..||.+|++.
T Consensus       199 ~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc  278 (396)
T KOG0593|consen  199 EPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSC  278 (396)
T ss_pred             CcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccH
Confidence            999999998887776665432111               1111          123466778999999999999999999


Q ss_pred             HHHhcCcccCc
Q 027327          136 PEIQKHPWFLK  146 (225)
Q Consensus       136 ~eil~hp~~~~  146 (225)
                      +++|.|+||..
T Consensus       279 ~qll~H~yFd~  289 (396)
T KOG0593|consen  279 EQLLHHPYFDG  289 (396)
T ss_pred             HHHhcChHHHH
Confidence            99999999943

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-34  Score=226.32  Aligned_cols=175  Identities=29%  Similarity=0.372  Sum_probs=125.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC---CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~---~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      ||+||||||.|+|++.+.  .+||+|||+|+....   ....+..+.|.+|+|||++....-++++.||||+|||+.||+
T Consensus       145 nViHRDLKPsNll~n~~c--~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL  222 (359)
T KOG0660|consen  145 NVIHRDLKPSNLLLNADC--DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEML  222 (359)
T ss_pred             cccccccchhheeeccCC--CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHH
Confidence            799999999999998877  699999999997653   333456689999999999876554456699999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHH-------------------hcccccCC------CCCCCCHHHHHHHHhhcccCCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRI-------------------LSVHYSIP------GYVRVSLECRHLLSRIFVADPEKRI  133 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~-------------------~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~R~  133 (225)
                      +|++.|.+.....++..+..-+                   +......|      .+++.++.+.+|+.+||..||.+|+
T Consensus       223 ~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRi  302 (359)
T KOG0660|consen  223 TGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRI  302 (359)
T ss_pred             cCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccC
Confidence            9999998876544433322211                   11111111      2346889999999999999999999


Q ss_pred             CHHHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHHHH
Q 027327          134 TIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE  181 (225)
Q Consensus       134 s~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (225)
                      |++|+|+|||+......+...........  .... .+.+++.+++-+
T Consensus       303 ta~eAL~hPYl~~~hdp~dEP~~~~~~~~--~~~~-~~~~~~r~~i~~  347 (359)
T KOG0660|consen  303 TAEEALAHPYLAPYHDPEDEPVCQPIFDS--FEHE-LTEEELRELIYK  347 (359)
T ss_pred             CHHHHhcChhhhhhcCCccCCCCCCCCcc--cccc-ccHHHHHHHHHH
Confidence            99999999999876554332211111111  2222 567777765543

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-34  Score=231.57  Aligned_cols=146  Identities=28%  Similarity=0.431  Sum_probs=122.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      |+.||||||+|||+..+.  .|||+|||+|+..........++.|++|+|||++....+++.+.|+||+|||++|+.+-+
T Consensus       130 GfFHRDlKPENiLi~~~~--~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLr  207 (538)
T KOG0661|consen  130 GFFHRDLKPENILISGND--VIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLR  207 (538)
T ss_pred             CcccccCChhheEecccc--eeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhc
Confidence            899999999999998554  699999999998888888888899999999999987776667799999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcc---------------cccCCC---------CCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           82 YPFEDPEDPRNFKTTIQRILSV---------------HYSIPG---------YVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~~---------~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      +.|.+.+..+++.++..-+..+               .+.+|.         .++.+.++.+||.+||.+||.+||||.+
T Consensus       208 PLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~  287 (538)
T KOG0661|consen  208 PLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQ  287 (538)
T ss_pred             ccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHH
Confidence            9999998888777766543221               122222         2347889999999999999999999999


Q ss_pred             HhcCcccCcCCC
Q 027327          138 IQKHPWFLKNLP  149 (225)
Q Consensus       138 il~hp~~~~~~~  149 (225)
                      +|+||||....+
T Consensus       288 al~~pffq~~~~  299 (538)
T KOG0661|consen  288 ALQHPFFQVGRA  299 (538)
T ss_pred             HhcCcccccccc
Confidence            999999975433

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=4.9e-34  Score=234.52  Aligned_cols=140  Identities=39%  Similarity=0.647  Sum_probs=114.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC----------------------C--C----C-------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL----------------------H--S----Q-------------   39 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~----------------------~--~----~-------------   39 (225)
                      .|+|||||||+|+||+..|  ++||+|||++.....                      .  .    .             
T Consensus       260 ~gyIHRDIKPdNlLiD~~G--HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w  337 (550)
T KOG0605|consen  260 LGYIHRDIKPDNLLIDAKG--HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTW  337 (550)
T ss_pred             cCcccccCChhheeecCCC--CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHH
Confidence            5899999999999999887  899999999852100                      0  0    0             


Q ss_pred             -------CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCC
Q 027327           40 -------PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR  112 (225)
Q Consensus        40 -------~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (225)
                             ....+|||-|+|||++.+.+|.-. +|+||||||+||||.|.+||........+.+++...  ..+..|....
T Consensus       338 ~~nrr~~a~StVGTPDYiAPEVll~kgY~~~-cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr--~~l~fP~~~~  414 (550)
T KOG0605|consen  338 KRNRRQLAYSTVGTPDYIAPEVLLGKGYGKE-CDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR--ETLKFPEEVD  414 (550)
T ss_pred             HhhhhhhhhcccCCccccchHHHhcCCCCcc-ccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh--hhccCCCcCc
Confidence                   024579999999999999998655 999999999999999999999877766666555432  2345566667


Q ss_pred             CCHHHHHHHHhhcccCCCCCCC---HHHHhcCcccCc
Q 027327          113 VSLECRHLLSRIFVADPEKRIT---IPEIQKHPWFLK  146 (225)
Q Consensus       113 ~~~~~~~li~~~l~~dP~~R~s---~~eil~hp~~~~  146 (225)
                      ++.++++||.+||. ||.+|..   ++||.+||||+.
T Consensus       415 ~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~  450 (550)
T KOG0605|consen  415 LSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKG  450 (550)
T ss_pred             ccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcccc
Confidence            89999999999999 9999995   899999999975

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-34  Score=235.84  Aligned_cols=141  Identities=30%  Similarity=0.500  Sum_probs=117.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||||||||.+|||+..++  .+||+|||++....... ...+.+|||+|||||++....|..+ +||||||++.+||+-
T Consensus       388 ~gIiHrDIKSDnILL~~~g--~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~K-VDIWSLGIMaIEMve  464 (550)
T KOG0578|consen  388 RGIIHRDIKSDNILLTMDG--SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPK-VDIWSLGIMAIEMVE  464 (550)
T ss_pred             cceeeeccccceeEeccCC--cEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCcc-ccchhhhhHHHHHhc
Confidence            4899999999999998777  69999999998765554 4556789999999999999999766 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |.+||-......   .+..-.......+.....+|+.+++||.+||+.|+.+|++|.++|+||||+..
T Consensus       465 GEPPYlnE~Plr---AlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  465 GEPPYLNENPLR---ALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             CCCCccCCChHH---HHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence            999998644432   22222234455555666799999999999999999999999999999999543

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-33  Score=216.74  Aligned_cols=136  Identities=38%  Similarity=0.675  Sum_probs=120.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      ++||+|||||+|||++.++  ++||+|||+|+.....  ..+.+|||.|+|||++..++|.. ++|+|||||++|||+.|
T Consensus       163 ~~iiYRDLKPENiLlD~~G--~iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~sk~ynk-avDWWalGVLIYEMlaG  237 (355)
T KOG0616|consen  163 LDIIYRDLKPENLLLDQNG--HIKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQSKGYNK-AVDWWALGVLIYEMLAG  237 (355)
T ss_pred             cCeeeccCChHHeeeccCC--cEEEEeccceEEecCc--EEEecCCccccChHHhhcCCCCc-chhHHHHHHHHHHHHcC
Confidence            5799999999999999888  8999999999876433  67789999999999999999864 49999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      .+||...+.    ..+.++++.....+|..  +++.+++||+++|++|-.+|.     ...+|..||||+..
T Consensus       238 ~pPF~~~~~----~~iY~KI~~~~v~fP~~--fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  238 YPPFYDDNP----IQIYEKILEGKVKFPSY--FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             CCCCcCCCh----HHHHHHHHhCcccCCcc--cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence            999987655    56777888888888875  899999999999999999995     56899999999853

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-33  Score=213.09  Aligned_cols=140  Identities=31%  Similarity=0.556  Sum_probs=116.1

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~ll   78 (225)
                      ||||||+||+|||++..+  .+||||||++..+..........|.+.|||||.+.-   ..|+-. +||||||++++||.
T Consensus       212 ~viHRDvKPSNILlDe~G--niKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiR-aDVWSlGITlveLa  288 (391)
T KOG0983|consen  212 GVIHRDVKPSNILLDERG--NIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIR-ADVWSLGITLVELA  288 (391)
T ss_pred             ceeecccCccceEEccCC--CEEeecccccceeecccccccccCCccccCccccCCCCCCccchh-hhhhhhccchhhhh
Confidence            799999999999999877  799999999988777766666789999999999853   356655 89999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcc-cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|+.||.+....-   ..+.++... ...++....+|+.+++|+..||.+|+.+||...++|+|||++..
T Consensus       289 Tg~yPy~~c~tdF---e~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  289 TGQYPYKGCKTDF---EVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             cccCCCCCCCccH---HHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence            9999998865432   333333332 33445555699999999999999999999999999999999765

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-33  Score=224.70  Aligned_cols=143  Identities=34%  Similarity=0.474  Sum_probs=109.2

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCC----CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVL----HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~----~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +|||||||||+|||++. ++  .+||+|||+++....    ........||+.|||||++.......+++|||||||++.
T Consensus       136 ~g~vH~DiK~~NiLl~~~~~--~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVv  213 (313)
T KOG0198|consen  136 KGIVHCDIKPANILLDPSNG--DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVV  213 (313)
T ss_pred             CCEeccCcccceEEEeCCCC--eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEE
Confidence            58999999999999987 45  699999999986553    222335679999999999986433334599999999999


Q ss_pred             HHHhCCCCCCCC-CChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           76 VMLVGAYPFEDP-EDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        76 ~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ||++|..||... ...    ..+-.+.........+..++.++++||.+||.++|++||||.++|+|||..+...
T Consensus       214 EM~Tg~~PW~~~~~~~----~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  214 EMLTGKPPWSEFFEEA----EALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             eccCCCCcchhhcchH----HHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            999999999763 221    1112222222111223358999999999999999999999999999999987654

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-33  Score=227.50  Aligned_cols=145  Identities=37%  Similarity=0.624  Sum_probs=123.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC------CCCCCcccCCCCCccccccC---CccCCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH------SQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~------~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG   71 (225)
                      .|||||||||+|+|++.++  +|||+|||.+......      ......+|||.|+|||.+.+   ..+.+.+.||||+|
T Consensus       229 QgiiHRDIKPsNLLl~~~g--~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG  306 (576)
T KOG0585|consen  229 QGIIHRDIKPSNLLLSSDG--TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG  306 (576)
T ss_pred             cCeeccccchhheEEcCCC--cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence            3899999999999998886  8999999998755222      22234689999999999976   45777889999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCcc
Q 027327           72 VTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE  151 (225)
Q Consensus        72 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~  151 (225)
                      |++|.|+.|+.||.+    +.......+|......+|..+.+.+.+++||.+||.+||.+|+++.+|..|||........
T Consensus       307 VTLYCllfG~~PF~~----~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~  382 (576)
T KOG0585|consen  307 VTLYCLLFGQLPFFD----DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP  382 (576)
T ss_pred             hhHHHhhhccCCccc----chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence            999999999999987    4446677788888888888878899999999999999999999999999999998764443

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-33  Score=215.51  Aligned_cols=150  Identities=34%  Similarity=0.607  Sum_probs=123.6

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      ++|.||||||+|+|...+. ...+||+|||+|+.........+.+-||+|.|||++-...|+-. +|+||+|+++|.|++
T Consensus       180 ~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydks-cdmwSlgVimYIlLC  258 (400)
T KOG0604|consen  180 MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLC  258 (400)
T ss_pred             cchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCC-CCccchhHHHHHhhc
Confidence            5899999999999996533 23689999999998777777788899999999999987888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCcc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE  151 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~  151 (225)
                      |.+||........-.....++....+.+  +.+..+|..++++|+++|+.+|.+|.|+++++.|||+.+.....
T Consensus       259 GyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp  332 (400)
T KOG0604|consen  259 GYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVP  332 (400)
T ss_pred             CCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCC
Confidence            9999987654333334445566555544  45677899999999999999999999999999999998764443

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=2.6e-32  Score=229.98  Aligned_cols=138  Identities=37%  Similarity=0.662  Sum_probs=120.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC-CCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-LHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||||||||.+|||++..|  ++||+|||+++... ......+.+|||.|||||++.+..|+.. +|+|||||+||+||.
T Consensus       487 ~~IIYRDlKLdNiLLD~eG--h~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~a-VDWW~lGVLlyeML~  563 (694)
T KOG0694|consen  487 NGIIYRDLKLDNLLLDTEG--HVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRA-VDWWGLGVLLYEMLV  563 (694)
T ss_pred             cCceeeecchhheEEcccC--cEEecccccccccCCCCCccccccCChhhcChhhhccCcccch-hhHHHHHHHHHHHHc
Confidence            4899999999999999887  89999999998654 5566778899999999999999999765 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~~  147 (225)
                      |..||.+.+..    .++..|+.....+|.+  +|.++.++++++|.++|++|..     +.+|.+||||+.-
T Consensus       564 Gq~PF~gddEe----e~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  564 GESPFPGDDEE----EVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             CCCCCCCCCHH----HHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence            99999986654    4445566666777765  8999999999999999999995     5789999999753

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.7e-32  Score=216.62  Aligned_cols=146  Identities=29%  Similarity=0.461  Sum_probs=120.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||.|+|++... +.+||||||.|+.........+.+.|+.|+|||.+.+...++.+.||||.||++.||+.|
T Consensus       144 ~~IcHRDIKPqNlLvD~~t-g~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g  222 (364)
T KOG0658|consen  144 HGICHRDIKPQNLLVDPDT-GVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKG  222 (364)
T ss_pred             cCcccCCCChheEEEcCCC-CeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcC
Confidence            4899999999999998764 379999999999988888878889999999999999876555669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHh----------ccc---ccCC----------CCCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           81 AYPFEDPEDPRNFKTTIQRIL----------SVH---YSIP----------GYVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~----------~~~---~~~~----------~~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      ++.|.+.+..+++..+++-+.          ...   ...|          .....++++.+|+.++|.++|.+|.++.+
T Consensus       223 ~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~  302 (364)
T KOG0658|consen  223 QPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALE  302 (364)
T ss_pred             CcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHH
Confidence            999999887777666654321          111   0111          12347889999999999999999999999


Q ss_pred             HhcCcccCcC
Q 027327          138 IQKHPWFLKN  147 (225)
Q Consensus       138 il~hp~~~~~  147 (225)
                      ++.||||..-
T Consensus       303 ~l~h~fFdel  312 (364)
T KOG0658|consen  303 ALAHPFFDEL  312 (364)
T ss_pred             HhcchhhHHh
Confidence            9999999753

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.98  E-value=3.5e-32  Score=206.59  Aligned_cols=144  Identities=29%  Similarity=0.411  Sum_probs=118.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCC-cccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~-~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +.|+||||||.|+|++.++  .+||+|||+|+.........+ .+.|.+|+|||.+.+...++..+|+||.|||+.||+.
T Consensus       120 ~~IlHRDlKPnNLLis~~g--~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELll  197 (318)
T KOG0659|consen  120 KWILHRDLKPNNLLISSDG--QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLL  197 (318)
T ss_pred             hhhhcccCCccceEEcCCC--cEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHc
Confidence            3689999999999999888  799999999997765544443 3789999999999887655666999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc-cCC---------------------CCCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY-SIP---------------------GYVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~---------------------~~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      |.+-|.+.++.+++..+++.+..+.. .+|                     .++..+..+.+|+.+||.+||.+|+|+.|
T Consensus       198 r~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~q  277 (318)
T KOG0659|consen  198 RVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQ  277 (318)
T ss_pred             cCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHH
Confidence            99999999988887777765432211 111                     12335678899999999999999999999


Q ss_pred             HhcCcccCc
Q 027327          138 IQKHPWFLK  146 (225)
Q Consensus       138 il~hp~~~~  146 (225)
                      +++|+||+.
T Consensus       278 aL~~~yf~~  286 (318)
T KOG0659|consen  278 ALKHPYFKS  286 (318)
T ss_pred             Hhcchhhhc
Confidence            999999986

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-32  Score=221.70  Aligned_cols=138  Identities=29%  Similarity=0.405  Sum_probs=111.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +.+|||||+.|||+...+  .|||+|||++......... .+++||+.|||||++.+..|+.+ +||||||++.+||++|
T Consensus       131 ~kiHrDIKaanil~s~~g--~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~K-ADIWSLGITaiEla~G  207 (467)
T KOG0201|consen  131 KKIHRDIKAANILLSESG--DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTK-ADIWSLGITAIELAKG  207 (467)
T ss_pred             ceecccccccceeEeccC--cEEEEecceeeeeechhhccccccccccccchhhhccccccch-hhhhhhhHHHHHHhcC
Confidence            689999999999998775  7999999999766554333 67899999999999998889877 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      .+||....+...+..+    -... +......+++.+++||..||++||+.||+|.++|+|+|+++.
T Consensus       208 ePP~s~~hPmrvlflI----pk~~-PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  208 EPPHSKLHPMRVLFLI----PKSA-PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             CCCCcccCcceEEEec----cCCC-CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence            9999876653222111    1111 111112689999999999999999999999999999999864

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.2e-32  Score=209.49  Aligned_cols=126  Identities=31%  Similarity=0.481  Sum_probs=108.1

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      |+||||||.||+++.++  .|||+|||+++.+..... ..+.+|||+||+||++...+|+.+ +||||+||++|||+.-+
T Consensus       149 VmHRDIKPaNIFl~~~g--vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~k-SDiWslGCllyEMcaL~  225 (375)
T KOG0591|consen  149 VMHRDIKPANIFLTANG--VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFK-SDIWSLGCLLYEMCALQ  225 (375)
T ss_pred             eeeccCcchheEEcCCC--ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcc-hhHHHHHHHHHHHHhcC
Confidence            89999999999999887  799999999987655433 345689999999999999999877 99999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +||.+.    ++....+++....++.-+...+|..+..+|..|+.+||.+||+.
T Consensus       226 ~PF~g~----n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  226 SPFYGD----NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             CCcccc----cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence            999984    66777788887766522224588999999999999999999984

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=3.1e-31  Score=220.00  Aligned_cols=146  Identities=29%  Similarity=0.425  Sum_probs=110.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++............+++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       145 ~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwSlG~il~ell~g  221 (364)
T cd07875         145 AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMIKG  221 (364)
T ss_pred             CCeecCCCCHHHEEECCCC--cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCch-hhHHhHHHHHHHHHhC
Confidence            4899999999999998776  799999999986544444455678999999999988877655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc------------------ccccC--------------C----CCCCCCHHHHHHHHhh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS------------------VHYSI--------------P----GYVRVSLECRHLLSRI  124 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~------------------~~~~~--------------~----~~~~~~~~~~~li~~~  124 (225)
                      +.||.+......+..++.....                  .....              +    .....+..+++||.+|
T Consensus       222 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~m  301 (364)
T cd07875         222 GVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM  301 (364)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHh
Confidence            9999876544433333221100                  00000              0    0011345789999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCcCCC
Q 027327          125 FVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |..||.+|||+.++|+||||.....
T Consensus       302 L~~dP~~R~t~~e~L~hp~~~~~~~  326 (364)
T cd07875         302 LVIDASKRISVDEALQHPYINVWYD  326 (364)
T ss_pred             cCcCcccCCCHHHHhcCcccccccC
Confidence            9999999999999999999975433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=3e-31  Score=219.64  Aligned_cols=146  Identities=29%  Similarity=0.475  Sum_probs=109.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++............+|+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       142 ~~ivHrDlkp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwSlG~il~el~tg  218 (359)
T cd07876         142 AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGELVKG  218 (359)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcc-hhhHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999976544444445678999999999988888766 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHH------------------hcccccCC------------------CCCCCCHHHHHHHHhh
Q 027327           81 AYPFEDPEDPRNFKTTIQRI------------------LSVHYSIP------------------GYVRVSLECRHLLSRI  124 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~------------------~~~~~~~~------------------~~~~~~~~~~~li~~~  124 (225)
                      +.||.+......+.......                  .......+                  .....+..+++||.+|
T Consensus       219 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m  298 (359)
T cd07876         219 SVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKM  298 (359)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHH
Confidence            99998765433222221111                  00000000                  0012356789999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCcCCC
Q 027327          125 FVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |.+||.+|||+.++++||||..+..
T Consensus       299 L~~dP~~R~t~~e~l~hp~~~~~~~  323 (359)
T cd07876         299 LVIDPDKRISVDEALRHPYITVWYD  323 (359)
T ss_pred             hccCcccCCCHHHHhcCchhhhhcC
Confidence            9999999999999999999976543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=8.1e-32  Score=228.44  Aligned_cols=145  Identities=27%  Similarity=0.411  Sum_probs=110.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++. .+||+|||+|+............|++.|+|||++.+....+.++|||||||++|+|++|
T Consensus       189 ~~IiHrDLKp~NILl~~~~~-~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG  267 (440)
T PTZ00036        189 KFICHRDLKPQNLLIDPNTH-TLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG  267 (440)
T ss_pred             CCEecCCcCHHHEEEcCCCC-ceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            48999999999999975542 59999999998665444445567899999999987654334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc-------------cccCCC----------CCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV-------------HYSIPG----------YVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~-------------~~~~~~----------~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      .+||.+......+..+++.....             ...++.          +...+.++++||.+||.++|.+|||+.+
T Consensus       268 ~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e  347 (440)
T PTZ00036        268 YPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIE  347 (440)
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            99998876655544443322110             000110          1236789999999999999999999999


Q ss_pred             HhcCcccCc
Q 027327          138 IQKHPWFLK  146 (225)
Q Consensus       138 il~hp~~~~  146 (225)
                      +++||||..
T Consensus       348 ~l~hp~f~~  356 (440)
T PTZ00036        348 ALADPFFDD  356 (440)
T ss_pred             HhCChhHHh
Confidence            999999964

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=1.9e-31  Score=214.42  Aligned_cols=141  Identities=28%  Similarity=0.407  Sum_probs=109.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  .+||+|||+++............|++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       129 ~~iiH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g  205 (290)
T cd07862         129 HRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP-VDLWSVGCIFAEMFRR  205 (290)
T ss_pred             CCeeeCCCCHHHEEEcCCC--CEEEccccceEeccCCcccccccccccccChHHHhCCCCCCc-cchHHHHHHHHHHHcC
Confidence            4899999999999998776  799999999976544444445578999999999987777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc-ccCC--------------------CCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH-YSIP--------------------GYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~-~~~~--------------------~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      .+||.+......+..+........ ...+                    ..+.++..+++|+.+||+.+|++|||+.+++
T Consensus       206 ~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l  285 (290)
T cd07862         206 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL  285 (290)
T ss_pred             CCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence            999987766554444433211000 0000                    0124677889999999999999999999999


Q ss_pred             cCccc
Q 027327          140 KHPWF  144 (225)
Q Consensus       140 ~hp~~  144 (225)
                      +||||
T Consensus       286 ~hp~f  290 (290)
T cd07862         286 SHPYF  290 (290)
T ss_pred             cCCCC
Confidence            99998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=1.9e-31  Score=214.13  Aligned_cols=142  Identities=26%  Similarity=0.463  Sum_probs=112.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  .+||+|||++.............|++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       121 ~~iiH~dikp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DvwslGvil~el~~g  197 (285)
T cd05631         121 ERIVYRDLKPENILLDDRG--HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFS-PDWWGLGCLIYEMIQG  197 (285)
T ss_pred             CCEEeCCCCHHHEEECCCC--CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcc-cCchhHHHHHHHHHhC
Confidence            4899999999999998766  799999999976544334445578999999999988887655 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~~  147 (225)
                      +.||...............+.......  ...++..+.+|+++||+.||.+||+     ++++++||||...
T Consensus       198 ~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         198 QSPFRKRKERVKREEVDRRVKEDQEEY--SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             CCCCCCCCcchhHHHHHHHhhcccccC--CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence            999987554333333333332222222  2358899999999999999999997     8999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=4.8e-31  Score=218.09  Aligned_cols=145  Identities=29%  Similarity=0.418  Sum_probs=109.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++............+++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       138 ~givHrDikp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g  214 (355)
T cd07874         138 AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMVRH  214 (355)
T ss_pred             CCcccCCCChHHEEECCCC--CEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCch-hhHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999986554444455678999999999988877655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc------------------cccc--------------CC----CCCCCCHHHHHHHHhh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS------------------VHYS--------------IP----GYVRVSLECRHLLSRI  124 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~------------------~~~~--------------~~----~~~~~~~~~~~li~~~  124 (225)
                      +.||.+......+...+.....                  ....              .+    .....+..+++||.+|
T Consensus       215 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m  294 (355)
T cd07874         215 KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM  294 (355)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHH
Confidence            9999876543333222221100                  0000              00    0112356789999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCcCC
Q 027327          125 FVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |..||.+|||+.++++||||....
T Consensus       295 L~~dP~~Rps~~ell~hp~~~~~~  318 (355)
T cd07874         295 LVIDPAKRISVDEALQHPYINVWY  318 (355)
T ss_pred             hcCCchhcCCHHHHhcCcchhccc
Confidence            999999999999999999997553

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.97  E-value=8.3e-32  Score=226.18  Aligned_cols=143  Identities=29%  Similarity=0.385  Sum_probs=112.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||||+||||+|||+..-....|||+|||.|......  ..+.+.++.|+|||++.+.+|..+ .||||||||++||++|
T Consensus       308 l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~--vytYiQSRfYRAPEVILGlpY~~~-IDmWSLGCIlAEL~tG  384 (586)
T KOG0667|consen  308 LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR--VYTYIQSRFYRAPEVILGLPYDTA-IDMWSLGCILAELFTG  384 (586)
T ss_pred             CCeeeccCChhheeeccCCcCceeEEecccccccCCc--ceeeeeccccccchhhccCCCCCc-cceeehhhhHHhHhcC
Confidence            5899999999999998777778999999999865433  337789999999999999999877 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc------------------------------------------------cccCC-CCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV------------------------------------------------HYSIP-GYV  111 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~-~~~  111 (225)
                      .+.|.+.+..+++..+++-+..+                                                ....| ...
T Consensus       385 ~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~  464 (586)
T KOG0667|consen  385 EPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSR  464 (586)
T ss_pred             ccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCc
Confidence            99999887766655544322100                                                00001 000


Q ss_pred             --------CCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327          112 --------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       112 --------~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                              .-...+.+||++||.+||.+|+|+.++|+||||..
T Consensus       465 ~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  465 SLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             ccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence                    01125689999999999999999999999999984

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=3.3e-31  Score=218.60  Aligned_cols=142  Identities=35%  Similarity=0.629  Sum_probs=120.8

Q ss_pred             CceEecCCCCCcEEEcCCCC--CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA--PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~--~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|+|+.....  +.+|++|||++............+||+.|+|||++.+..|... +|+||+|+++|.|+
T Consensus       154 ~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~-~DiWS~Gvi~yiLL  232 (382)
T KOG0032|consen  154 LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDE-VDVWSIGVILYILL  232 (382)
T ss_pred             CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcc-cchhHHHHHHHHHh
Confidence            58999999999999965432  3799999999998777556677899999999999988888766 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcc--cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|..||.+........    .+...  .+..+.+..++..+++||++||..||.+|+|+.++|+|||+...
T Consensus       233 ~G~~PF~~~~~~~~~~----~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  233 SGVPPFWGETEFEIFL----AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             hCCCCCcCCChhHHHH----HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            9999999877654444    33333  44556777899999999999999999999999999999999864

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.97  E-value=4.8e-31  Score=208.08  Aligned_cols=145  Identities=28%  Similarity=0.392  Sum_probs=115.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||||+.++  .+||+|||+|+....... ....++|.+|+|||++.+...++...||||+|||++||++
T Consensus       139 ~~IlHRDLKPQNlLi~~~G--~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~  216 (323)
T KOG0594|consen  139 HGILHRDLKPQNLLISSSG--VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFT  216 (323)
T ss_pred             CCeecccCCcceEEECCCC--cEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHh
Confidence            3899999999999999866  799999999986654433 4456899999999999987544444999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc-cc-------------CCCC----------CCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH-YS-------------IPGY----------VRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~----------~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +++.|.+....+.+..+++.+..+. ..             ++.+          +...+...+++.+||+++|.+|.|+
T Consensus       217 ~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa  296 (323)
T KOG0594|consen  217 RRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISA  296 (323)
T ss_pred             CCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCH
Confidence            9999999888777777766543221 01             1111          1133478899999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      ..+|.||||...
T Consensus       297 ~~al~h~yf~~~  308 (323)
T KOG0594|consen  297 KGALTHPYFSEL  308 (323)
T ss_pred             HHHhcChhhccc
Confidence            999999999764

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.97  E-value=5.6e-31  Score=205.85  Aligned_cols=144  Identities=30%  Similarity=0.401  Sum_probs=117.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC-CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~-~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|+||||||+|+|++..+  .+||+|||+|+.+....... ..+.|.+|+|||++.+...++.+.|+||+|||+.||+.+
T Consensus       197 wilHRDLK~SNLLm~~~G--~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~  274 (419)
T KOG0663|consen  197 WILHRDLKTSNLLLSHKG--ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQ  274 (419)
T ss_pred             eeEecccchhheeeccCC--cEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhc
Confidence            589999999999998777  79999999999876664444 447899999999999876555669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc-ccCCC-----------------------C--CCCCHHHHHHHHhhcccCCCCCCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH-YSIPG-----------------------Y--VRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------~--~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      ++.|.+.+..+++..+++-+..+. ..+|.                       +  ..++....+|++++|.+||.+|.|
T Consensus       275 kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t  354 (419)
T KOG0663|consen  275 KPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT  354 (419)
T ss_pred             CCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc
Confidence            999999998888877776442211 00110                       0  014578889999999999999999


Q ss_pred             HHHHhcCcccCcC
Q 027327          135 IPEIQKHPWFLKN  147 (225)
Q Consensus       135 ~~eil~hp~~~~~  147 (225)
                      |+++|+|.||...
T Consensus       355 A~~~L~h~~F~e~  367 (419)
T KOG0663|consen  355 AEDGLKHEYFRET  367 (419)
T ss_pred             HHHhhcccccccC
Confidence            9999999999863

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=5.8e-31  Score=217.16  Aligned_cols=138  Identities=33%  Similarity=0.527  Sum_probs=105.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccC----------CCcccHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYD----------GKIADVW   68 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~----------~~~~Diw   68 (225)
                      ||||.||||.|+|+-..   .+||+|||+|........   ..+.+||+.||+||.+....+.          +.++|||
T Consensus       480 gIVHSDLKPANFLlVkG---~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvW  556 (677)
T KOG0596|consen  480 GIVHSDLKPANFLLVKG---RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVW  556 (677)
T ss_pred             ceeecCCCcccEEEEee---eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchh
Confidence            89999999999999533   699999999986655433   2345899999999998644432          3458999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           69 SCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        69 slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |||||+|+|+.|+.||...   .+....+..+..+..  .+|..+. ..++.++++.||..||.+|||+.++|+|||...
T Consensus       557 SLGCILYqMvYgktPf~~~---~n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  557 SLGCILYQMVYGKTPFGQI---INQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             hhhhHHHHHHhcCCchHHH---HHHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            9999999999999999642   223444445555433  3333221 234999999999999999999999999999875

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=9.7e-31  Score=210.39  Aligned_cols=142  Identities=26%  Similarity=0.419  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++...... ......+++.|+|||++.+....+.++||||+||++|+|++
T Consensus       122 ~~ivH~dlkp~Nil~~~~~--~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~  199 (288)
T cd07871         122 RKILHRDLKPQNLLINEKG--ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMAT  199 (288)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987543222 22345689999999998764433455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc---------------ccCC---------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH---------------YSIP---------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~---------------~~~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||.+......+..+........               ...+         ....++.++++||++||.+||.+|||+
T Consensus       200 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~  279 (288)
T cd07871         200 GRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISA  279 (288)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCH
Confidence            9999987655443333322111000               0001         112467889999999999999999999


Q ss_pred             HHHhcCccc
Q 027327          136 PEIQKHPWF  144 (225)
Q Consensus       136 ~eil~hp~~  144 (225)
                      +++++||||
T Consensus       280 ~~~l~hp~f  288 (288)
T cd07871         280 EAALRHSYF  288 (288)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=1.8e-30  Score=210.21  Aligned_cols=145  Identities=24%  Similarity=0.378  Sum_probs=105.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... .......+++.|+|||++.+......++|||||||++|+|++
T Consensus       122 ~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  199 (303)
T cd07869         122 RYILHRDLKPQNLLISDTG--ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQ  199 (303)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998766  7999999998743322 222345689999999998765544455899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc------------------cc--CC-------CCCCCCHHHHHHHHhhcccCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH------------------YS--IP-------GYVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~------------------~~--~~-------~~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      |..||.+..........+.......                  +.  .+       ....++..+++|+.+||++||.+|
T Consensus       200 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R  279 (303)
T cd07869         200 GVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNR  279 (303)
T ss_pred             CCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhc
Confidence            9999987544322211111111000                  00  00       001245678999999999999999


Q ss_pred             CCHHHHhcCcccCcC
Q 027327          133 ITIPEIQKHPWFLKN  147 (225)
Q Consensus       133 ~s~~eil~hp~~~~~  147 (225)
                      ||+.++++||||...
T Consensus       280 ~s~~~~l~h~~f~~~  294 (303)
T cd07869         280 LSAQAALSHEYFSDL  294 (303)
T ss_pred             cCHHHHhcCcccccC
Confidence            999999999999764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=3.6e-31  Score=219.11  Aligned_cols=138  Identities=33%  Similarity=0.638  Sum_probs=118.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCc-ccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~-~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .+|+|||+||.|||+..++  ++|++|||+|+.+.......+. .|||.|||||++.+.+|+.. +|+|||||++||++.
T Consensus       119 ~rilhrd~kPqniLl~~~~--~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~-sDlWslGcilYE~~~  195 (808)
T KOG0597|consen  119 NRILHRDMKPQNILLEKGG--TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHT-SDLWSLGCILYELYV  195 (808)
T ss_pred             cCcccccCCcceeeecCCC--ceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccch-hhHHHHHHHHHHHhc
Confidence            3799999999999998777  7999999999977665554443 59999999999999999877 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |++||..    ..+....+.|......+|.  .++..+++|+..+|.+||.+|.|..+++.|||++..
T Consensus       196 G~PPF~a----~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  196 GQPPFYA----RSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             CCCCchH----HHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence            9999975    4455666666665555444  689999999999999999999999999999999754

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.8e-31  Score=213.30  Aligned_cols=141  Identities=33%  Similarity=0.507  Sum_probs=122.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .+||+|||||+|||+++.+  +|+|+|+|+|............+||.+|||||++.+..|+.+ .|+|||||++|+|+.|
T Consensus       306 ~~iVYRDLKPeNILLDd~G--hvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s-~Dwf~lGCllYemi~G  382 (591)
T KOG0986|consen  306 RRIVYRDLKPENILLDDHG--HVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFS-PDWFSLGCLLYEMIAG  382 (591)
T ss_pred             cceeeccCChhheeeccCC--CeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCC-ccHHHHHhHHHHHHcc
Confidence            3799999999999999877  899999999998888888888899999999999999998877 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      +.||...........+-+++......++  .++|+++++|.+.+|.+||.+|..     +.++.+||||+.
T Consensus       383 ~sPFr~~KeKvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  383 HSPFRQRKEKVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             cCchhhhhhhhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence            9999876655555555566666655555  469999999999999999999994     679999999974

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=7.8e-31  Score=224.22  Aligned_cols=145  Identities=24%  Similarity=0.390  Sum_probs=104.6

Q ss_pred             CceEecCCCCCcEEEcCCCC--------------CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSKA--------------PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~--------------~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~D   66 (225)
                      +|||||||||+|||++..+.              ..+||+|||.+....  ......+||+.|+|||++.+..|..+ +|
T Consensus       251 ~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~-~D  327 (467)
T PTZ00284        251 LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYS-TD  327 (467)
T ss_pred             CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcH-HH
Confidence            38999999999999975432              149999999876422  22335579999999999988888755 99


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhc-------------------cccc-CCC----------------C
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS-------------------VHYS-IPG----------------Y  110 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~~-~~~----------------~  110 (225)
                      ||||||++|+|++|+.||.+......+..+...+..                   .... .+.                .
T Consensus       328 iwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (467)
T PTZ00284        328 MWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVRE  407 (467)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhh
Confidence            999999999999999999875543322221111000                   0000 000                0


Q ss_pred             CCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327          111 VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus       111 ~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      ....+.+.+||.+||++||.+|||+.|+|+||||.+..
T Consensus       408 ~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        408 VIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             hhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence            00134577999999999999999999999999998643

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=6.3e-31  Score=214.85  Aligned_cols=138  Identities=36%  Similarity=0.633  Sum_probs=110.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++.... .......+||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       114 ~~ivHrDlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~ellt  190 (323)
T cd05571         114 CDVVYRDLKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMC  190 (323)
T ss_pred             CCeEeCCCCHHHEEECCCC--CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCcc-ccCcccchhhhhhhc
Confidence            4899999999999998776  799999999875322 223334579999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......+  ..++.++++||++||..||++||     ++.++++||||...
T Consensus       191 g~~Pf~~~~~~----~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         191 GRLPFYNQDHE----KLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCCCCCCCHH----HHHHHHHcCCCCCC--CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999764432    22233333333333  35899999999999999999999     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.1e-30  Score=213.54  Aligned_cols=143  Identities=26%  Similarity=0.375  Sum_probs=117.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+|||||.+||||++++  .+||+|||+|+.+....  .....+.|.+|+|||++.+..-++.++|+||.||||.||+
T Consensus       237 ~gvlHRDIK~SNiLidn~G--~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~  314 (560)
T KOG0600|consen  237 RGVLHRDIKGSNILIDNNG--VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELF  314 (560)
T ss_pred             cCeeeccccccceEEcCCC--CEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHH
Confidence            5899999999999999887  79999999999654433  4556689999999999998776666699999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhccc------ccCCC-----------------CCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVH------YSIPG-----------------YVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~------~~~~~-----------------~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      .|++.|++....+++..++.-...+.      ..+|.                 +..++..+.+|+..||..||.+|.||
T Consensus       315 ~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA  394 (560)
T KOG0600|consen  315 LGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTA  394 (560)
T ss_pred             cCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccH
Confidence            99999999988777776664332111      11111                 12367788999999999999999999


Q ss_pred             HHHhcCcccC
Q 027327          136 PEIQKHPWFL  145 (225)
Q Consensus       136 ~eil~hp~~~  145 (225)
                      .++|+|.||.
T Consensus       395 ~~aL~seyF~  404 (560)
T KOG0600|consen  395 SSALQSEYFT  404 (560)
T ss_pred             HHHhcCcccc
Confidence            9999999994

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=2.5e-30  Score=207.61  Aligned_cols=141  Identities=27%  Similarity=0.374  Sum_probs=108.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  .+||+|||+++............++..|+|||++.+..++.+ +||||+||++|+|++|
T Consensus       127 ~~ivH~dikp~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~~l~~l~~g  203 (288)
T cd07863         127 NCIVHRDLKPENILVTSGG--QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRR  203 (288)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEECccCccccccCcccCCCccccccccCchHhhCCCCCCc-chhhhHHHHHHHHHhC
Confidence            4899999999999998776  799999999876544433344568999999999987777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc-------ccc-----C---------CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV-------HYS-----I---------PGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~-------~~~-----~---------~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      .+||........+..+.......       ...     .         ...+.++..+++||.+||++||.+|||+.+++
T Consensus       204 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l  283 (288)
T cd07863         204 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL  283 (288)
T ss_pred             CcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence            99997765544444333221100       000     0         00124677889999999999999999999999


Q ss_pred             cCccc
Q 027327          140 KHPWF  144 (225)
Q Consensus       140 ~hp~~  144 (225)
                      .||||
T Consensus       284 ~hp~f  288 (288)
T cd07863         284 QHPFF  288 (288)
T ss_pred             cCCCC
Confidence            99998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=1.2e-30  Score=213.87  Aligned_cols=143  Identities=35%  Similarity=0.581  Sum_probs=110.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+|||++.++  .+||+|||+++.......  .....||+.|+|||++.+....+.++|||||||++|+|+
T Consensus       124 ~~ivHrDlkp~Nili~~~~--~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  201 (332)
T cd05614         124 LGIVYRDIKLENILLDSEG--HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELL  201 (332)
T ss_pred             CCcEecCCCHHHeEECCCC--CEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhh
Confidence            4899999999999998776  799999999875433222  223468999999999986653445599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      +|..||...............+.......+  ..++..+++||.+||+.||.+||     +++++++||||...
T Consensus       202 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         202 TGASPFTLEGERNTQSEVSRRILKCDPPFP--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             cCCCCCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999754433323333334444333333  35889999999999999999999     88899999999763

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=3e-30  Score=206.61  Aligned_cols=140  Identities=33%  Similarity=0.580  Sum_probs=116.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC---------------------------------C-C--------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL---------------------------------H-S--------   38 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~---------------------------------~-~--------   38 (225)
                      +|||+|||||+||||..++  +|.|+||.++.....                                 . .        
T Consensus       198 lGivYRDLKPENILvredG--HIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~  275 (459)
T KOG0610|consen  198 LGIVYRDLKPENILVREDG--HIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDES  275 (459)
T ss_pred             hceeeccCCcceeEEecCC--cEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccc
Confidence            6999999999999998888  899999998642100                                 0 0        


Q ss_pred             ---------------CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcc
Q 027327           39 ---------------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV  103 (225)
Q Consensus        39 ---------------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~  103 (225)
                                     ....++||-.|+|||++.+.+.... +|+|+|||++|||+.|..||.+.+...    .+.+++..
T Consensus       276 ~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA-VDWWtfGIflYEmLyG~TPFKG~~~~~----Tl~NIv~~  350 (459)
T KOG0610|consen  276 ASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA-VDWWTFGIFLYEMLYGTTPFKGSNNKE----TLRNIVGQ  350 (459)
T ss_pred             ccccchhhhcCCCCccccccccccccccceeeecCCCCch-hhHHHHHHHHHHHHhCCCCcCCCCchh----hHHHHhcC
Confidence                           0123478999999999998887655 999999999999999999999977754    44555666


Q ss_pred             cccCCCCCCCCHHHHHHHHhhcccCCCCCCC----HHHHhcCcccCcC
Q 027327          104 HYSIPGYVRVSLECRHLLSRIFVADPEKRIT----IPEIQKHPWFLKN  147 (225)
Q Consensus       104 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s----~~eil~hp~~~~~  147 (225)
                      ...+|..+.++..+++||+++|.+||.+|..    |.||.+||||..-
T Consensus       351 ~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  351 PLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV  398 (459)
T ss_pred             CCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence            6777777788999999999999999999998    9999999999753

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=214.06  Aligned_cols=139  Identities=36%  Similarity=0.700  Sum_probs=123.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      -+|||||||+|+++-... +.|||+|||++..+.......+.+|+..|.|||++.+..|+..++||||||+|+|.|++|+
T Consensus       138 HVVHRDLKPENVVFFEKl-GlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq  216 (864)
T KOG4717|consen  138 HVVHRDLKPENVVFFEKL-GLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQ  216 (864)
T ss_pred             hhhcccCCcceeEEeeec-CceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCC
Confidence            479999999999875332 3799999999998888888899999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +||+..++.+    .+..++...+..|.  .++.+|++||..||..||.+|.+.++|..|+|++..
T Consensus       217 ~PFqeANDSE----TLTmImDCKYtvPs--hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  217 PPFQEANDSE----TLTMIMDCKYTVPS--HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             Cccccccchh----hhhhhhcccccCch--hhhHHHHHHHHHHHhcCchhhccHHHHhccccccCC
Confidence            9999877754    44556777787776  489999999999999999999999999999999753

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=210.30  Aligned_cols=147  Identities=33%  Similarity=0.478  Sum_probs=111.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----C-CCcccCCCCCcccccc-C-CccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----P-KSTVGTPAYIAPEVLS-R-KEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~-~~~~g~~~y~aPE~l~-~-~~~~~~~~DiwslG~i   73 (225)
                      .|-||||||+.||||+.+|  .|||+|||.+..+.....    . .+.+||++|||||++. + .+|+.+ +|||||||+
T Consensus       145 ~G~IHRdvKAgnILi~~dG--~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfK-aDIwSfGIT  221 (516)
T KOG0582|consen  145 NGHIHRDVKAGNILIDSDG--TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFK-ADIWSFGIT  221 (516)
T ss_pred             cCceecccccccEEEcCCC--cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccch-hhhhhhhHH
Confidence            4789999999999999888  799999998653322211    1 4568999999999954 3 456555 999999999


Q ss_pred             HHHHHhCCCCCCCCCChhHHHHHHHHHhcccc-------cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           74 LYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-------SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        74 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ..||.+|..||....+...+...   +....+       .......++..+++++..||.+||.+||||+++|+|+||++
T Consensus       222 A~ELA~G~aPf~k~pPmkvLl~t---Lqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~  298 (516)
T KOG0582|consen  222 ACELAHGHAPFSKYPPMKVLLLT---LQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK  298 (516)
T ss_pred             HHHHhcCCCCcccCChHHHHHHH---hcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence            99999999999876654433322   222221       11122346778999999999999999999999999999987


Q ss_pred             CCCcccc
Q 027327          147 NLPIEFM  153 (225)
Q Consensus       147 ~~~~~~~  153 (225)
                      ....+..
T Consensus       299 ~k~~~~~  305 (516)
T KOG0582|consen  299 AKSKEYL  305 (516)
T ss_pred             ccchhhc
Confidence            6555443

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=6.8e-30  Score=205.06  Aligned_cols=141  Identities=27%  Similarity=0.387  Sum_probs=105.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||++.......  ......|++.|+|||++.+..++.+ +|+|||||++|+|+
T Consensus       119 ~~i~H~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslGvil~el~  195 (287)
T cd07848         119 NDIVHRDIKPENLLISHND--VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKA-VDMWSVGCILGELS  195 (287)
T ss_pred             CCeecCCCCHHHEEEcCCC--cEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCc-hhHHhHHHHHHHHH
Confidence            4899999999999998766  79999999997653322  2223468999999999988777654 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhc------------c---cccCCC-----------CCCCCHHHHHHHHhhcccCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILS------------V---HYSIPG-----------YVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~------------~---~~~~~~-----------~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      +|+.||...........+......            .   ....+.           ...++..+.+||++||++||.+|
T Consensus       196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R  275 (287)
T cd07848         196 DGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDR  275 (287)
T ss_pred             hCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccC
Confidence            999999875543332221111000            0   000010           11267789999999999999999


Q ss_pred             CCHHHHhcCccc
Q 027327          133 ITIPEIQKHPWF  144 (225)
Q Consensus       133 ~s~~eil~hp~~  144 (225)
                      ||++++++||||
T Consensus       276 ~s~~~~l~hp~f  287 (287)
T cd07848         276 YLTEQCLNHPAF  287 (287)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.97  E-value=4.7e-30  Score=199.51  Aligned_cols=179  Identities=26%  Similarity=0.401  Sum_probs=129.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.+.  .+||.|||+|+.....-.....+.+..|+|||++.+..|... +||||+||++.||++|
T Consensus       137 ~~IihRdLkPsnivv~~~~--~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~-vdiwSvGci~gEli~~  213 (369)
T KOG0665|consen  137 AGIIHRDLKPSNIVVNSDC--TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGELILG  213 (369)
T ss_pred             cceeecccCcccceecchh--heeeccchhhcccCcccccCchhheeeccCchheeccCCccc-chhhhhhhHHHHHhhc
Confidence            4899999999999998776  799999999987655545556689999999999999888766 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc------------------cc---------CCC---------CCCCCHHHHHHHHhh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH------------------YS---------IPG---------YVRVSLECRHLLSRI  124 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~------------------~~---------~~~---------~~~~~~~~~~li~~~  124 (225)
                      ...|.+....+++.++.+....+.                  ..         +|.         ...-+..+++++.+|
T Consensus       214 ~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~M  293 (369)
T KOG0665|consen  214 TVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKM  293 (369)
T ss_pred             eEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHh
Confidence            999987655544444433221100                  00         000         001223578999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHHHHh
Q 027327          125 FVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEA  182 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (225)
                      |..+|++|.++.++|+|||++-+.....++...+......-..+..+.+++++.+.+.
T Consensus       294 Lvi~pe~Risv~daL~HPY~~vw~~~~ev~ap~pe~~d~~~d~~~~t~~e~ke~If~e  351 (369)
T KOG0665|consen  294 LVIDPEKRISVDDALRHPYIKVWYDPDEVEAPPPEIYDKQLDEREHTIEEWKELIFKE  351 (369)
T ss_pred             hccChhhcccHHHHhcCCeeeeecccccccCCCCchhhhhcccccCCHHHHHHHHHHH
Confidence            9999999999999999999986644444444443322122334455688888766543

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.6e-30  Score=209.40  Aligned_cols=138  Identities=35%  Similarity=0.618  Sum_probs=110.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       112 ~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslGvil~el~t  188 (312)
T cd05585         112 FNVIYRDLKPENILLDYQG--HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKA-VDWWTLGVLLYEMLT  188 (312)
T ss_pred             CCeEeCCCCHHHeEECCCC--cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCc-cceechhHHHHHHHh
Confidence            4899999999999998776  7999999998753322 22234569999999999988877655 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC---CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~---s~~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......+  ..++.++++||.+||..||.+||   ++.+++.||||.+.
T Consensus       189 g~~pf~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         189 GLPPFYDENVN----EMYRKILQEPLRFP--DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCCcCCCCHH----HHHHHHHcCCCCCC--CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            99999865433    33334444443333  35889999999999999999997   57999999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.96  E-value=4.6e-30  Score=209.51  Aligned_cols=138  Identities=35%  Similarity=0.600  Sum_probs=110.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......|++.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       115 ~~ivH~dlkp~NIli~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~  191 (320)
T cd05590         115 KGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPS-VDWWAMGVLLYEMLC  191 (320)
T ss_pred             CCeEeCCCCHHHeEECCCC--cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCc-cchhhhHHHHHHHhh
Confidence            4899999999999998776  7999999998753222 22334568999999999987777655 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH------HHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI------PEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~------~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......+.  .++.++++||++||+.||.+|+++      +++++||||...
T Consensus       192 g~~Pf~~~~~~----~~~~~i~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         192 GHAPFEAENED----DLFEAILNDEVVYPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCCCCCHH----HHHHHHhcCCCCCCC--CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            99999875543    233334443333333  478999999999999999999998      999999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.5e-30  Score=205.90  Aligned_cols=135  Identities=34%  Similarity=0.622  Sum_probs=108.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  .+||+|||+++....  ......|++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       120 ~~i~H~dlkp~NIli~~~~--~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~~l~~g  194 (291)
T cd05612         120 KEIVYRDLKPENILLDKEG--HIKLTDFGFAKKLRD--RTWTLCGTPEYLAPEVIQSKGHNKA-VDWWALGILIYEMLVG  194 (291)
T ss_pred             CCeeecCCCHHHeEECCCC--CEEEEecCcchhccC--CcccccCChhhcCHHHHcCCCCCch-hhHHHHHHHHHHHHhC
Confidence            4899999999999998766  799999999875432  2234568999999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      +.||.......    ....+.......+.  .++..+++||++||+.||.+|++     +.++++||||..
T Consensus       195 ~~pf~~~~~~~----~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         195 YPPFFDDNPFG----IYEKILAGKLEFPR--HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             CCCCCCCCHHH----HHHHHHhCCcCCCc--cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence            99998754432    23333333333333  46889999999999999999995     999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.96  E-value=3.4e-30  Score=211.00  Aligned_cols=136  Identities=33%  Similarity=0.566  Sum_probs=109.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++.....  .....|++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       137 ~~ivH~dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~elltg  211 (329)
T PTZ00263        137 KDIIYRDLKPENLLLDNKG--HVKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKGHGKA-VDWWTMGVLLYEFIAG  211 (329)
T ss_pred             CCeeecCCCHHHEEECCCC--CEEEeeccCceEcCCC--cceecCChhhcCHHHHcCCCCCCc-ceeechHHHHHHHHcC
Confidence            4899999999999998776  7999999998754322  234578999999999988777654 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~~  147 (225)
                      ..||.+....    .....+.......|.  .++..+++||.+||..||.+|++     +.++++||||...
T Consensus       212 ~~pf~~~~~~----~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        212 YPPFFDDTPF----RIYEKILAGRLKFPN--WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             CCCCCCCCHH----HHHHHHhcCCcCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            9999765432    233344444444443  47889999999999999999997     7999999999763

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=3.4e-30  Score=193.10  Aligned_cols=137  Identities=37%  Similarity=0.664  Sum_probs=119.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      ++||||||||+|+|++..+  .+||+|||-+.... .....+.+||.-|.+||.+.+..++.. +|+|++|++.||++.|
T Consensus       143 k~VIhRdiKpenlLlg~~~--~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~-Vd~w~lgvl~yeflvg  218 (281)
T KOG0580|consen  143 KRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKF-VDLWSLGVLCYEFLVG  218 (281)
T ss_pred             CCcccCCCCHHHhccCCCC--CeeccCCCceeecC-CCCceeeecccccCCHhhcCCCCccch-hhHHHHHHHHHHHHhc
Confidence            5899999999999998777  79999999987655 556677899999999999999998866 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      .+||....    .....+++......+|  ..++..+++||.+||.++|.+|++..+++.|||+...
T Consensus       219 ~ppFes~~----~~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  219 LPPFESQS----HSETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             CCchhhhh----hHHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence            99998755    3455666667777777  4699999999999999999999999999999998653

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.96  E-value=5.4e-30  Score=209.77  Aligned_cols=138  Identities=37%  Similarity=0.661  Sum_probs=109.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       114 ~~ivHrDikp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~ellt  190 (328)
T cd05593         114 GKIVYRDLKLENLMLDKDG--HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMC  190 (328)
T ss_pred             CCeEecccCHHHeEECCCC--cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCcc-CCccccchHHHHHhh
Confidence            4899999999999998776  7999999998753222 22334569999999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......|  ..++.++.+||++||..||.+|+     ++.++++||||...
T Consensus       191 G~~Pf~~~~~~----~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         191 GRLPFYNQDHE----KLFELILMEDIKFP--RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCCCCCCCHH----HHHHHhccCCccCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999765432    22333333333333  35899999999999999999997     89999999999753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.7e-30  Score=215.06  Aligned_cols=132  Identities=37%  Similarity=0.556  Sum_probs=109.1

Q ss_pred             CceEecCCCCCcEEEc-CCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~-~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||+. +.+  +++|+|||.++.....  ..+.+-|..|.|||++....|+.. +||||||+++|+||+
T Consensus       434 ~gvvhRDLkp~NIL~~~~~g--~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~a-cD~WSLGvlLy~ML~  508 (612)
T KOG0603|consen  434 QGVVHRDLKPGNILLDGSAG--HLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEA-CDWWSLGVLLYEMLT  508 (612)
T ss_pred             cCeeecCCChhheeecCCCC--cEEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcc-hhhHHHHHHHHHHHh
Confidence            5899999999999995 444  7999999999865444  344567889999999998888766 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+.||......   ..+..++....+.    ..+|.++++||++||+.||.+|+++.+++.||||
T Consensus       509 G~tp~~~~P~~---~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  509 GRTLFAAHPAG---IEIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             CCCccccCCch---HHHHHhhcCCccc----cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            99999865544   3333444333332    4689999999999999999999999999999999

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=1.6e-29  Score=207.17  Aligned_cols=141  Identities=26%  Similarity=0.522  Sum_probs=105.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      +|+||||||+|||++.++  .+||+|||++...... ......|++.|+|||++.+..++.+ +|||||||++|+|++|+
T Consensus       124 ~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~tg~  199 (331)
T cd06649         124 QIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQ-SDIWSMGLSLVELAIGR  199 (331)
T ss_pred             CEEcCCCChhhEEEcCCC--cEEEccCccccccccc-ccccCCCCcCcCCHhHhcCCCCCch-HhHHHHHHHHHHHHhCC
Confidence            599999999999998776  7999999998754322 2334568999999999988777655 99999999999999999


Q ss_pred             CCCCCCCChhHHHHHH-------------------------------------------HHHhcccccCCCCCCCCHHHH
Q 027327           82 YPFEDPEDPRNFKTTI-------------------------------------------QRILSVHYSIPGYVRVSLECR  118 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~  118 (225)
                      .||....... +....                                           ..+............++.+++
T Consensus       200 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  278 (331)
T cd06649         200 YPIPPPDAKE-LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQ  278 (331)
T ss_pred             CCCCCCCHHH-HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHH
Confidence            9996543211 11111                                           111111111111124678999


Q ss_pred             HHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          119 HLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       119 ~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +||.+||.+||++|||+.++++||||...
T Consensus       279 ~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         279 EFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             HHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence            99999999999999999999999999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.1e-29  Score=207.41  Aligned_cols=144  Identities=26%  Similarity=0.385  Sum_probs=106.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++....  ......+++.|+|||++.+....+.++|||||||++|+|++|
T Consensus       137 ~~ivHrdikp~Nil~~~~~--~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  212 (343)
T cd07878         137 AGIIHRDLKPSNVAVNEDC--ELRILDFGLARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG  212 (343)
T ss_pred             CCeecccCChhhEEECCCC--CEEEcCCccceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHC
Confidence            4899999999999998776  799999999875432  233457899999999997744334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHh-------------------cccccCC------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRIL-------------------SVHYSIP------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||........+........                   ......+      .....++.+.+||.+||..||.+|||+
T Consensus       213 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~  292 (343)
T cd07878         213 KALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISA  292 (343)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCH
Confidence            999976544333222211110                   0000000      012356678999999999999999999


Q ss_pred             HHHhcCcccCcCC
Q 027327          136 PEIQKHPWFLKNL  148 (225)
Q Consensus       136 ~eil~hp~~~~~~  148 (225)
                      .++++||||.+..
T Consensus       293 ~ell~hp~~~~~~  305 (343)
T cd07878         293 SEALAHPYFSQYH  305 (343)
T ss_pred             HHHhcCcchhccC
Confidence            9999999998643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=1.8e-29  Score=207.08  Aligned_cols=146  Identities=27%  Similarity=0.432  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccC--CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSR--KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~--~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......    .....|++.|+|||++.+  ..++ .++|||||||++
T Consensus       122 ~~ivH~dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~~~DvwSlGvvl  198 (338)
T cd07859         122 ANVFHRDLKPKNILANADC--KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT-PAIDIWSIGCIF  198 (338)
T ss_pred             CCeecCCCCHHHeEECCCC--cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccC-chhHHHHHHHHH
Confidence            4899999999999998776  799999999875422211    123468999999999865  4454 449999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHH-----------HH-----------hcccccC---CCCCCCCHHHHHHHHhhcccCC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQ-----------RI-----------LSVHYSI---PGYVRVSLECRHLLSRIFVADP  129 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~-----------~~-----------~~~~~~~---~~~~~~~~~~~~li~~~l~~dP  129 (225)
                      |+|++|+.||.+......+..+..           .+           .......   ...+.+++.+.+||.+||..+|
T Consensus       199 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  278 (338)
T cd07859         199 AEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDP  278 (338)
T ss_pred             HHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCc
Confidence            999999999976543222111100           00           0000000   1123467889999999999999


Q ss_pred             CCCCCHHHHhcCcccCcCCC
Q 027327          130 EKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       130 ~~R~s~~eil~hp~~~~~~~  149 (225)
                      .+|||+.++++||||+....
T Consensus       279 ~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         279 KDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             ccCCCHHHHhcCchhhhcCc
Confidence            99999999999999976433

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.96  E-value=5.7e-30  Score=210.57  Aligned_cols=136  Identities=36%  Similarity=0.603  Sum_probs=109.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  .+||+|||+++....  ......||+.|+|||++.+..++.+ +|+|||||++|+|++|
T Consensus       150 ~~ivHrDLkp~NILl~~~~--~ikL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell~G  224 (340)
T PTZ00426        150 LNIVYRDLKPENLLLDKDG--FIKMTDFGFAKVVDT--RTYTLCGTPEYIAPEILLNVGHGKA-ADWWTLGIFIYEILVG  224 (340)
T ss_pred             CCeEccCCCHHHEEECCCC--CEEEecCCCCeecCC--CcceecCChhhcCHHHHhCCCCCcc-ccccchhhHHHHHhcC
Confidence            4899999999999998766  799999999875432  2344579999999999987777654 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      ..||.......    ....+.......|.  .++..++++|++||+.+|.+|+     +++++++||||.+.
T Consensus       225 ~~Pf~~~~~~~----~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        225 CPPFYANEPLL----IYQKILEGIIYFPK--FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             CCCCCCCCHHH----HHHHHhcCCCCCCC--CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99998754432    23334444333343  4789999999999999999995     89999999999753

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.96  E-value=1.5e-29  Score=205.99  Aligned_cols=144  Identities=27%  Similarity=0.378  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCC--CCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGS--KAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~--~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+|||+...  ..+.+||+|||+++......    ......+|+.|+|||++.+....+.++||||+||++
T Consensus       127 ~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  206 (317)
T cd07868         127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF  206 (317)
T ss_pred             CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHH
Confidence            489999999999999432  22379999999997543321    123456899999999998755444559999999999


Q ss_pred             HHHHhCCCCCCCCCCh---------hHHHHHHHHHh------------------------ccccc--------CCCCCCC
Q 027327           75 YVMLVGAYPFEDPEDP---------RNFKTTIQRIL------------------------SVHYS--------IPGYVRV  113 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~---------~~~~~~~~~~~------------------------~~~~~--------~~~~~~~  113 (225)
                      |+|++|++||......         ..+..+.....                        .....        .......
T Consensus       207 ~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (317)
T cd07868         207 AELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP  286 (317)
T ss_pred             HHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCC
Confidence            9999999999653321         11111111000                        00000        0001123


Q ss_pred             CHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327          114 SLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus       114 ~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +..+.+||.+||.+||.+|||++++|+||||
T Consensus       287 ~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         287 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             ChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            5578999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.96  E-value=3.4e-30  Score=210.64  Aligned_cols=138  Identities=36%  Similarity=0.633  Sum_probs=109.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++.... ........|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~~ivHrDikp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~el~t  191 (325)
T cd05594         115 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMC  191 (325)
T ss_pred             CCEEecCCCCCeEEECCCC--CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCc-cccccccceeeeecc
Confidence            4899999999999998776  799999999875322 222334569999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |..||......    .....+.......+  ..+++++.+||++||+.||.+|+     ++.++++||||...
T Consensus       192 G~~Pf~~~~~~----~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         192 GRLPFYNQDHE----KLFELILMEEIRFP--RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCCCCCCCCHH----HHHHHHhcCCCCCC--CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence            99999765432    22233333333333  35889999999999999999997     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.96  E-value=1.2e-29  Score=207.20  Aligned_cols=138  Identities=36%  Similarity=0.654  Sum_probs=109.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       114 ~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell~  190 (323)
T cd05595         114 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMC  190 (323)
T ss_pred             CCeEecCCCHHHEEEcCCC--CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCch-hchhhhHHHHHHHHh
Confidence            4899999999999998776  7999999998753222 22234569999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||.......    ....+.......|  ..+++++++||.+||+.+|.+|+     ++.++++|+||.+.
T Consensus       191 g~~Pf~~~~~~~----~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         191 GRLPFYNQDHER----LFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             CCCCCCCCCHHH----HHHHHhcCCCCCC--CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence            999997654432    2223333333333  35899999999999999999998     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.96  E-value=1.4e-29  Score=206.34  Aligned_cols=138  Identities=36%  Similarity=0.652  Sum_probs=108.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~el~~  191 (316)
T cd05620         115 KGIIYRDLKLDNVMLDRDG--HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFS-VDWWSFGVLLYEMLI  191 (316)
T ss_pred             CCeEecCCCHHHeEECCCC--CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcc-cchhhhHHHHHHHHh
Confidence            4899999999999998776  7999999998743222 22334568999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-HHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-PEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......+.  .++.++++||++||..||.+|+++ .++++||||...
T Consensus       192 g~~Pf~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         192 GQSPFHGDDED----ELFESIRVDTPHYPR--WITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             CCCCCCCCCHH----HHHHHHHhCCCCCCC--CCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence            99999765432    222333333333333  478999999999999999999998 589999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=2e-29  Score=201.71  Aligned_cols=142  Identities=26%  Similarity=0.431  Sum_probs=110.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+||+++.++  .++|+|||++.............++..|+|||++.+..++.+ +|+|||||++|+|++|
T Consensus       114 ~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslGv~l~el~~g  190 (277)
T cd05607         114 MDIVYRDMKPENVLLDDQG--NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYP-VDWFAMGCSIYEMVAG  190 (277)
T ss_pred             CCEEEccCChHhEEEcCCC--CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCc-hhHHHHHHHHHHHHhC
Confidence            4899999999999998776  699999999876544333334568999999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH----HHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI----PEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~----~eil~hp~~~~  146 (225)
                      ..||.......................+ ...++.++++|+++||++||.+||++    +++++||||..
T Consensus       191 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         191 RTPFKDHKEKVAKEELKRRTLEDEVKFE-HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             CCCCCCCcchhhHHHHHHHhhccccccc-cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence            9999765433232333333333332222 23578999999999999999999999    67889999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.3e-29  Score=208.34  Aligned_cols=143  Identities=29%  Similarity=0.479  Sum_probs=102.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++..+  .+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|+++
T Consensus       176 ~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvvl~ell~~  252 (357)
T PHA03209        176 QRIIHRDVKTENIFINDVD--QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSK-ADIWSAGIVLFEMLAY  252 (357)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEecCccccccccCcccccccccccccCCeecCCCCCCch-hhHHHHHHHHHHHHHc
Confidence            4899999999999998776  699999999875443333344578999999999988887655 9999999999999986


Q ss_pred             CCCC-CCCCCh---------hHHHHHHHHHhcccccCC----------------------------CCCCCCHHHHHHHH
Q 027327           81 AYPF-EDPEDP---------RNFKTTIQRILSVHYSIP----------------------------GYVRVSLECRHLLS  122 (225)
Q Consensus        81 ~~pf-~~~~~~---------~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~  122 (225)
                      ..|+ ......         ..+...+.........++                            ....++..+.+||.
T Consensus       253 ~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  332 (357)
T PHA03209        253 PSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVH  332 (357)
T ss_pred             CCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHH
Confidence            5544 332111         011111111100000000                            01135667788999


Q ss_pred             hhcccCCCCCCCHHHHhcCcccCc
Q 027327          123 RIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       123 ~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +||+.||.+|||+.++|+||||++
T Consensus       333 ~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        333 KMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHcCCcccCcCHHHHhcCchhcc
Confidence            999999999999999999999974

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=1.7e-29  Score=206.44  Aligned_cols=138  Identities=37%  Similarity=0.614  Sum_probs=110.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......|++.|+|||++.+..+..+ +|||||||++|+|++
T Consensus       119 ~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  195 (323)
T cd05584         119 QGIIYRDLKPENILLDAQG--HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKA-VDWWSLGALMYDMLT  195 (323)
T ss_pred             CCeecCCCCHHHeEECCCC--CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCc-ceecccHHHHHHHhc
Confidence            4899999999999998776  7999999998743322 22334569999999999987777544 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......+  ..++..+.+||.+||+.+|.+||     ++.+++.||||...
T Consensus       196 G~~pf~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         196 GAPPFTAENRK----KTIDKILKGKLNLP--PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             CCCCCCCCCHH----HHHHHHHcCCCCCC--CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999875443    23334444443333  34789999999999999999999     89999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=1.6e-29  Score=206.99  Aligned_cols=141  Identities=33%  Similarity=0.586  Sum_probs=108.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++.... ........||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       115 ~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~~l~el~~  191 (329)
T cd05588         115 RGIIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFS-VDWWALGVLMFEMMA  191 (329)
T ss_pred             CCeEecCCCHHHeEECCCC--CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCc-cceechHHHHHHHHH
Confidence            5899999999999998776  799999999874322 223334579999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChh-----HHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC------HHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPR-----NFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT------IPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s------~~eil~hp~~~~  146 (225)
                      |+.||.......     ......+.+.......|.  .++.++.+||++||+.||.+|++      +.++++||||..
T Consensus       192 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         192 GRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             CCCCcccccccccccccchHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            999996322111     111222333343344443  47899999999999999999997      789999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=1.5e-29  Score=207.31  Aligned_cols=141  Identities=33%  Similarity=0.595  Sum_probs=108.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++.... ........||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       115 ~~ivH~Dikp~Nili~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~  191 (329)
T cd05618         115 RGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS-VDWWALGVLMFEMMA  191 (329)
T ss_pred             CCeeeCCCCHHHEEECCCC--CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCc-cceecccHHHHHHhh
Confidence            4899999999999998776  799999999875322 222334578999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCC-----hhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC------HHHHhcCcccCc
Q 027327           80 GAYPFEDPED-----PRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT------IPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s------~~eil~hp~~~~  146 (225)
                      |+.||.....     ..........+.......|.  .++..+.+||++||+.||.+||+      +.++++||||..
T Consensus       192 g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         192 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             CCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC--CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            9999953211     11112222333343444443  57899999999999999999998      579999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=3.9e-29  Score=206.64  Aligned_cols=144  Identities=31%  Similarity=0.540  Sum_probs=107.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccC----CccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSR----KEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~----~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+|||++.++  .+||+|||+++...... ......|+..|+|||++..    ..+.+.++|||||||++|
T Consensus       187 ~~ivHrDlkp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~  264 (353)
T PLN00034        187 RHIVHRDIKPSNLLINSAK--NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSIL  264 (353)
T ss_pred             CCEeecCCCHHHEEEcCCC--CEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHH
Confidence            4899999999999998776  79999999987543322 2234579999999998743    233444699999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      +|++|+.||...... .+......+... ........++.++++||.+||..+|.+|||+.++++||||.+..
T Consensus       265 el~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        265 EFYLGRFPFGVGRQG-DWASLMCAICMS-QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             HHHhCCCCCCCCCCc-cHHHHHHHHhcc-CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            999999999743321 222222222211 11122235789999999999999999999999999999998753

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.3e-29  Score=210.46  Aligned_cols=143  Identities=25%  Similarity=0.387  Sum_probs=103.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC--CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH--SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~--~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++..+  .+||+|||+++.....  .......||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       201 ~~IvHrDiKP~NIll~~~~--~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell  277 (391)
T PHA03212        201 NRIIHRDIKAENIFINHPG--DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPA-VDIWSAGIVLFEMA  277 (391)
T ss_pred             CCcccCCCChHhEEEcCCC--CEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcH-HHHHHHHHHHHHHH
Confidence            4899999999999998766  6999999998643222  12234579999999999988777655 99999999999999


Q ss_pred             hCCCCCCCCCC-------hhHHHHHHHHH----------------------hcccccCCC-------CCCCCHHHHHHHH
Q 027327           79 VGAYPFEDPED-------PRNFKTTIQRI----------------------LSVHYSIPG-------YVRVSLECRHLLS  122 (225)
Q Consensus        79 ~g~~pf~~~~~-------~~~~~~~~~~~----------------------~~~~~~~~~-------~~~~~~~~~~li~  122 (225)
                      +|..||.....       ...+..++...                      .......+.       ...++.++.+||.
T Consensus       278 tg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~  357 (391)
T PHA03212        278 TCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLIC  357 (391)
T ss_pred             HCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHH
Confidence            99988753221       11111111111                      000000000       0124668899999


Q ss_pred             hhcccCCCCCCCHHHHhcCcccCc
Q 027327          123 RIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       123 ~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +||.+||.+|||+.++|+||||..
T Consensus       358 ~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        358 KMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHhcCChhhCCCHHHHhcChhhcc
Confidence            999999999999999999999975

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=2.2e-29  Score=201.74  Aligned_cols=141  Identities=33%  Similarity=0.502  Sum_probs=109.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .+||+|||++........ .....|++.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       116 ~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~  192 (280)
T cd05608         116 RRIIYRDLKPENVLLDNDG--NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFS-VDYFALGVTLYEMIA  192 (280)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCcc-ccHHHHHHHHHHHHh
Confidence            4899999999999998766  799999999875433322 233468999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~  146 (225)
                      |+.||...............+.......  ...++..+.+|+.+||+.+|.+||     +++++++||||+.
T Consensus       193 g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         193 ARGPFRARGEKVENKELKQRILNDSVTY--PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             CCCCCCCCCcchhHHHHHHhhcccCCCC--cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence            9999976543322223333333322222  235889999999999999999999     8899999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=1.8e-29  Score=206.19  Aligned_cols=138  Identities=36%  Similarity=0.611  Sum_probs=109.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~givH~dikp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~ell~  191 (323)
T cd05575         115 LNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRT-VDWWCLGAVLYEMLY  191 (323)
T ss_pred             CCeEeCCCCHHHeEECCCC--cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCcc-ccccccchhhhhhhc
Confidence            4899999999999998776  7999999998753322 22334568999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH----HHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI----PEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~----~eil~hp~~~~~  147 (225)
                      |..||......    .....+.......+  ..++..+.+||++||+.+|.+||++    .+++.||||...
T Consensus       192 g~~pf~~~~~~----~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         192 GLPPFYSRDTA----EMYDNILNKPLRLK--PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCCCCCCCCHH----HHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence            99999865432    23333333333332  3579999999999999999999987    699999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=1.3e-29  Score=206.87  Aligned_cols=137  Identities=36%  Similarity=0.625  Sum_probs=109.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||++...... .......|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~~ivHrDikp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~el~t  191 (321)
T cd05591         115 HGVIYRDLKLDNILLDAEG--HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPS-VDWWALGVLMYEMMA  191 (321)
T ss_pred             CCeeccCCCHHHeEECCCC--CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCc-cceechhHHHHHHhc
Confidence            4899999999999998776  7999999998753222 22334568999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-------CHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-------TIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-------s~~eil~hp~~~~  146 (225)
                      |+.||.......    ....+.......|.  .++.++.+||.+||..+|.+|+       ++.++++||||..
T Consensus       192 g~~Pf~~~~~~~----~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         192 GQPPFEADNEDD----LFESILHDDVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence            999998755433    33334444333333  4789999999999999999999       8999999999965

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=5.5e-30  Score=204.76  Aligned_cols=143  Identities=35%  Similarity=0.585  Sum_probs=115.8

Q ss_pred             CceEecCCCCCcEEEcCC-CC---CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGS-KA---PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~---~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      ++||||||||+|||++.. ..   ..+||+|||+|+.........+.+|++.|||||++....|+.+ +|+||+|+|+|+
T Consensus       128 ~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAK-ADLWSiG~Ilyq  206 (429)
T KOG0595|consen  128 NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAK-ADLWSIGTILYQ  206 (429)
T ss_pred             CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccch-hhHHHHHHHHHH
Confidence            589999999999999764 22   4799999999999888777788899999999999999999877 899999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCC-CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG-YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |++|+.||...+..+-+.    .+.......|. ...++..+.+|+...|..+|..|.+..+-+.|++.....
T Consensus       207 ~l~g~~Pf~a~t~~eL~~----~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  207 CLTGKPPFDAETPKELLL----YIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             HHhCCCCccccCHHHHHH----HHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            999999998765533322    33322222222 123677788999999999999999999999999886543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=4.2e-29  Score=204.62  Aligned_cols=133  Identities=35%  Similarity=0.533  Sum_probs=105.1

Q ss_pred             c-eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCcccccc--CCccCCCcccHHHHHHHHHHH
Q 027327            2 Q-ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLS--RKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         2 ~-ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~--~~~~~~~~~DiwslG~il~~l   77 (225)
                      + ||||||||+|||++... .++||+|||+++..... .......||+.|||||++.  ...|+.+ +||||||+++|||
T Consensus       162 ~~iIHrDLK~~NiLv~~~~-~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K-~DvySFgIvlWEl  239 (362)
T KOG0192|consen  162 GPIIHRDLKSDNILVDLKG-KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEK-SDVYSFGIVLWEL  239 (362)
T ss_pred             CCeeecccChhhEEEcCCC-CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCcc-chhhhHHHHHHHH
Confidence            5 99999999999998765 27999999999865544 3334468999999999999  5577766 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++|+.||.+....    .....+.....+.+.+...++.+..|+.+||..||.+||++.+++.
T Consensus       240 ~t~~~Pf~~~~~~----~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  240 LTGEIPFEDLAPV----QVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHCCCCCCCCCHH----HHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            9999999886652    2222333233333333348899999999999999999999999865

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=2.4e-29  Score=205.56  Aligned_cols=137  Identities=34%  Similarity=0.646  Sum_probs=109.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||++..... ........|++.|+|||++.+..++.+ +|+||+||++|+|++
T Consensus       120 ~~ivH~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~ellt  196 (324)
T cd05587         120 KGIIYRDLKLDNVMLDAEG--HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLA  196 (324)
T ss_pred             CCeEecCCCHHHeEEcCCC--CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcc-cchhhhHHHHHHHHh
Confidence            4899999999999998776  799999999874322 222334568999999999988777655 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-----HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-----PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-----~eil~hp~~~~  146 (225)
                      |+.||.......    ....+.......+  ..++.++.+|+++||..+|.+|+++     .++++||||..
T Consensus       197 G~~pf~~~~~~~----~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         197 GQPPFDGEDEDE----LFQSIMEHNVSYP--KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            999998654432    2333333333333  3588999999999999999999986     89999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-29  Score=209.02  Aligned_cols=138  Identities=39%  Similarity=0.654  Sum_probs=110.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------------------------------CCCCcccCCCCC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------------------------------QPKSTVGTPAYI   50 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------------------------------~~~~~~g~~~y~   50 (225)
                      +||+||||||+|||++.++  .+||+|||++.......                              ......||+.|+
T Consensus       120 ~giiH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  197 (350)
T cd05573         120 LGFIHRDIKPDNILIDADG--HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYI  197 (350)
T ss_pred             CCeeccCCCHHHeEECCCC--CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCcccc
Confidence            5899999999999998776  79999999987544332                              223446899999


Q ss_pred             ccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhc--ccccCCCCCCCCHHHHHHHHhhcccC
Q 027327           51 APEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRVSLECRHLLSRIFVAD  128 (225)
Q Consensus        51 aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~d  128 (225)
                      |||++.+..++.+ +|||||||++|+|++|+.||.........    .++..  .....+....+++++++||.+||. +
T Consensus       198 aPE~~~~~~~~~~-~DiwSlG~il~ell~g~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-d  271 (350)
T cd05573         198 APEVLRGTPYGLE-CDWWSLGVILYEMLYGFPPFYSDTLQETY----NKIINWKESLRFPPDPPVSPEAIDLICRLLC-D  271 (350)
T ss_pred             CHHHHcCCCCCCc-eeeEecchhhhhhccCCCCCCCCCHHHHH----HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-C
Confidence            9999988877655 99999999999999999999876543322    23333  333444444579999999999997 9


Q ss_pred             CCCCCC-HHHHhcCcccCc
Q 027327          129 PEKRIT-IPEIQKHPWFLK  146 (225)
Q Consensus       129 P~~R~s-~~eil~hp~~~~  146 (225)
                      |.+|++ +.++++||||..
T Consensus       272 p~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         272 PEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             hhhcCCCHHHHhcCCCcCC
Confidence            999999 999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=3.1e-29  Score=204.91  Aligned_cols=138  Identities=34%  Similarity=0.617  Sum_probs=109.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++.... .......+|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       120 ~~ivHrdlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~  196 (324)
T cd05589         120 NKIVYRDLKLDNLLLDTEG--FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRA-VDWWGLGVLIYEMLV  196 (324)
T ss_pred             CCeEecCCCHHHeEECCCC--cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcc-cchhhHHHHHHHHHh
Confidence            4899999999999998776  799999999875322 222334579999999999988777655 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||.......    ....+.......+  ..++..+.+||.+||..||.+||     ++.++++||||...
T Consensus       197 G~~pf~~~~~~~----~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         197 GESPFPGDDEEE----VFDSIVNDEVRYP--RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             CCCCCCCCCHHH----HHHHHHhCCCCCC--CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            999998755432    2233333333333  35789999999999999999999     69999999999764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=5.4e-29  Score=205.75  Aligned_cols=174  Identities=26%  Similarity=0.386  Sum_probs=120.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.++  .+||+|||+++............+++.|+|||.+.+..++.+ +|||||||++|+|++|
T Consensus       137 ~gi~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~~l~~g  213 (353)
T cd07850         137 AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMIRG  213 (353)
T ss_pred             CCeeeCCCCHHHEEECCCC--CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCc-hhhHhHHHHHHHHHHC
Confidence            4899999999999998776  799999999986544444344568899999999988877655 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc------------------cccc--------------CCC-----CCCCCHHHHHHHHh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS------------------VHYS--------------IPG-----YVRVSLECRHLLSR  123 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~------------------~~~~--------------~~~-----~~~~~~~~~~li~~  123 (225)
                      +.||........+..+......                  ....              .+.     ....+..+++||.+
T Consensus       214 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  293 (353)
T cd07850         214 TVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSK  293 (353)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHH
Confidence            9999765443332222211100                  0000              000     11245678999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHH
Q 027327          124 IFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILG  177 (225)
Q Consensus       124 ~l~~dP~~R~s~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (225)
                      ||..||.+|||+.++|+||||..+..........+............+++++.+
T Consensus       294 ~L~~dP~~R~t~~eiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (353)
T cd07850         294 MLVIDPEKRISVDDALQHPYINVWYDPSEVEAPPPAPYDHSIDEREHTVEEWKE  347 (353)
T ss_pred             HcCCChhhCcCHHHHhcChhHhhccCCccCCCCCCCccccccccccccHHHHHH
Confidence            999999999999999999999876554333333222222222334445555544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.96  E-value=2.1e-29  Score=209.67  Aligned_cols=145  Identities=29%  Similarity=0.416  Sum_probs=107.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  .+||+|||+++......  ......+++.|+|||++.+....+.++||||+||++|+|+
T Consensus       122 ~~ivH~dlkp~Nili~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~  199 (372)
T cd07853         122 AGILHRDIKPGNLLVNSNC--VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELL  199 (372)
T ss_pred             CCeeCCCCChHHEEECCCC--CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHH
Confidence            4899999999999998776  79999999987543221  2223467899999999987554345599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHH-------------------HhcccccC-------CCCCCCCHHHHHHHHhhcccCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQR-------------------ILSVHYSI-------PGYVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~-------------------~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      +|+.||.+......+..+...                   +.......       ......+.++.+||.+||+.||.+|
T Consensus       200 ~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R  279 (372)
T cd07853         200 GRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKR  279 (372)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhC
Confidence            999999876544333222111                   00111110       1112357889999999999999999


Q ss_pred             CCHHHHhcCcccCcC
Q 027327          133 ITIPEIQKHPWFLKN  147 (225)
Q Consensus       133 ~s~~eil~hp~~~~~  147 (225)
                      ||+.++++||||...
T Consensus       280 ~t~~e~l~hp~~~~~  294 (372)
T cd07853         280 ISAADALAHPYLDEG  294 (372)
T ss_pred             cCHHHHhcCHhhCCC
Confidence            999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=2.5e-29  Score=204.05  Aligned_cols=145  Identities=26%  Similarity=0.408  Sum_probs=107.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++...... ......+++.|+|||++.+....+.++|||||||++|+|++
T Consensus       123 ~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~t  200 (309)
T cd07872         123 RKVLHRDLKPQNLLINERG--ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS  200 (309)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987543322 22334678999999998765433455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc---------------cccCC---------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV---------------HYSIP---------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||...................               ....+         ....++.++++||.+||..||.+|||+
T Consensus       201 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~  280 (309)
T cd07872         201 GRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISA  280 (309)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCH
Confidence            999998765543333322211000               00001         112468899999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .++++||||...
T Consensus       281 ~e~l~h~~~~~~  292 (309)
T cd07872         281 EEAMKHAYFRSL  292 (309)
T ss_pred             HHHhcChhhhhc
Confidence            999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=2.5e-29  Score=205.42  Aligned_cols=137  Identities=35%  Similarity=0.619  Sum_probs=109.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++.... ........|++.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       120 ~~ivHrDlkp~Nill~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ellt  196 (323)
T cd05616         120 KGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLA  196 (323)
T ss_pred             CCEEecCCCHHHeEECCCC--cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCc-cchhchhHHHHHHHh
Confidence            4899999999999998776  799999999875332 222334578999999999988887655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-----HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-----PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-----~eil~hp~~~~  146 (225)
                      |+.||.......    ....+.......|  ..++.++++|+.+||+++|.+|+++     .++++||||..
T Consensus       197 g~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         197 GQAPFEGEDEDE----LFQSIMEHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             CCCCCCCCCHHH----HHHHHHhCCCCCC--CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence            999998755432    3333444433333  3589999999999999999999984     89999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=3.5e-29  Score=207.66  Aligned_cols=139  Identities=33%  Similarity=0.557  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------------------------------------CCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------------------------------------QPKSTV   44 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------------------------------------~~~~~~   44 (225)
                      +|||||||||+|||++.++  ++||+|||+++......                                    .....+
T Consensus       120 ~givHrDlKp~NILi~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (363)
T cd05628         120 LGFIHRDIKPDNLLLDSKG--HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTV  197 (363)
T ss_pred             CCeEecCCCHHHeEECCCC--CEEEeeccCcccccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence            5899999999999998776  79999999987432110                                    012347


Q ss_pred             cCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhc--ccccCCCCCCCCHHHHHHHH
Q 027327           45 GTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRVSLECRHLLS  122 (225)
Q Consensus        45 g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~  122 (225)
                      ||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+......+    .++..  .....|....++.++++||.
T Consensus       198 Gt~~Y~aPE~~~~~~~~~~-~DvwSlGvil~ell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~~~~s~~~~~li~  272 (363)
T cd05628         198 GTPDYIAPEVFMQTGYNKL-CDWWSLGVIMYEMLIGYPPFCSETPQETY----KKVMNWKETLIFPPEVPISEKAKDLIL  272 (363)
T ss_pred             CCccccCHHHHcCCCCCCc-hhhhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCcCcccCCCcCCCCHHHHHHHH
Confidence            9999999999988877655 99999999999999999999875543333    23332  22334444458899999999


Q ss_pred             hhcccCCC---CCCCHHHHhcCcccCcC
Q 027327          123 RIFVADPE---KRITIPEIQKHPWFLKN  147 (225)
Q Consensus       123 ~~l~~dP~---~R~s~~eil~hp~~~~~  147 (225)
                      +|+. +|.   .||++.+|++||||...
T Consensus       273 ~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         273 RFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             HHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            9775 444   46899999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4e-29  Score=200.68  Aligned_cols=141  Identities=28%  Similarity=0.475  Sum_probs=111.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+||+++.++  .++|+|||++.............|++.|+|||++.+..++.+ +|+||+||++|+|++|
T Consensus       121 ~~ivH~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Diws~G~~l~el~~g  197 (285)
T cd05605         121 ERIVYRDLKPENILLDDYG--HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFS-PDWWGLGCLIYEMIEG  197 (285)
T ss_pred             CCcEecCCCHHHEEECCCC--CEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCcc-ccchhHHHHHHHHHHC
Confidence            4899999999999998766  799999999876544333344578999999999987777655 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~  146 (225)
                      +.||.+.............+.......  ...++..+.+|+.+||..||.+||     ++.++++||||..
T Consensus       198 ~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         198 KSPFRQRKEKVKREEVERRVKEDQEEY--SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             CCCCCCCchhhHHHHHHHHhhhccccc--CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            999987554333333333333222222  234789999999999999999999     8999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=3.1e-29  Score=204.43  Aligned_cols=138  Identities=40%  Similarity=0.670  Sum_probs=110.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... ......+|++.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       115 ~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DiwslGvil~~l~~  191 (318)
T cd05570         115 RGIIYRDLKLDNVLLDSEG--HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPA-VDWWALGVLLYEMLA  191 (318)
T ss_pred             CCeEccCCCHHHeEECCCC--cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcc-hhhhhHHHHHHHHhh
Confidence            4899999999999998776  7999999998653222 22234468999999999988887655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-----HHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-----PEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-----~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......+  ..++..+.+||++||..||.+||++     .++++||||...
T Consensus       192 G~~pf~~~~~~----~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         192 GQSPFEGDDED----ELFQSILEDEVRYP--RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCCCCCCCCHH----HHHHHHHcCCCCCC--CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999765432    22333333333333  3478999999999999999999999     999999999763

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.9e-29  Score=206.92  Aligned_cols=140  Identities=35%  Similarity=0.570  Sum_probs=109.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||++.....  ......|++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       120 ~~ivH~dlkp~Nil~~~~~--~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~ell~g  194 (333)
T cd05600         120 LGYIHRDLKPENFLIDASG--HIKLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRGKGYDFT-VDYWSLGCMLYEFLCG  194 (333)
T ss_pred             CCccccCCCHHHEEECCCC--CEEEEeCcCCccccc--ccCCcccCccccChhHhcCCCCCCc-cceecchHHHhhhhhC
Confidence            4899999999999998776  799999999875433  3345579999999999988877655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCC----CCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGY----VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||........+..+...  ......+..    ..++.++.+||.+||..+|.+||++.++++||||...
T Consensus       195 ~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         195 FPPFSGSTPNETWENLKYW--KETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             CCCCCCCCHHHHHHHHHhc--cccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            9999875543333222211  111111211    2568999999999999999999999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.96  E-value=5e-29  Score=203.03  Aligned_cols=137  Identities=39%  Similarity=0.702  Sum_probs=108.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... ......+||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~~ivH~dlkp~Nill~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~ell~  191 (316)
T cd05592         115 KGIIYRDLKLDNVLLDKDG--HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNES-VDWWSFGVLLYEMLI  191 (316)
T ss_pred             CCEEeCCCCHHHeEECCCC--CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCc-ccchhHHHHHHHHHh
Confidence            4899999999999998776  7999999998754322 22234568999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-~eil~hp~~~~  146 (225)
                      |+.||.+.....    ....+.......+  ..++.++.+||.+||..+|.+||++ .++++||||..
T Consensus       192 G~~Pf~~~~~~~----~~~~i~~~~~~~~--~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         192 GQSPFHGEDEDE----LFDSILNDRPHFP--RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCCCC--CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence            999998755432    2223333333333  3478899999999999999999986 58889999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.1e-30  Score=208.52  Aligned_cols=140  Identities=32%  Similarity=0.539  Sum_probs=108.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++.... .......+||+.|+|||++.+....+.++|||||||++|+|++
T Consensus       115 ~~ivHrDlkp~Nili~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ellt  192 (330)
T cd05586         115 YDIVYRDLKPENILLDATG--HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCC  192 (330)
T ss_pred             CCeEeccCCHHHeEECCCC--CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEecc
Confidence            4899999999999998776  799999999875322 2233445799999999998765433455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~----s~~eil~hp~~~~~  147 (225)
                      |..||......    .....+.......+. ..++.++++||++||..+|.+||    ++.++++||||...
T Consensus       193 G~~Pf~~~~~~----~~~~~i~~~~~~~~~-~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         193 GWSPFYAEDTQ----QMYRNIAFGKVRFPK-NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCCCCCCCHH----HHHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence            99999765432    233333333333332 24789999999999999999998    68999999999753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=3.8e-29  Score=207.93  Aligned_cols=140  Identities=36%  Similarity=0.622  Sum_probs=109.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCc---cCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKE---YDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~---~~~~~~DiwslG~il~   75 (225)
                      +||+||||||+|||++.++  .+||+|||++.......  .....+||+.|+|||++.+..   +.+.++|+|||||++|
T Consensus       161 ~~ivHrDLkp~NILl~~~~--~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvily  238 (370)
T cd05596         161 MGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY  238 (370)
T ss_pred             CCeeccCCCHHHEEEcCCC--CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHH
Confidence            4899999999999998776  79999999987543322  223457999999999986532   2334599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcc--cccCCCCCCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCc
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLK  146 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~  146 (225)
                      +|++|+.||........+    ..+...  ....+....++.++++||++||..+|.+  |+|+.++++||||..
T Consensus       239 elltG~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         239 EMLVGDTPFYADSLVGTY----SKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             HHHhCCCCcCCCCHHHHH----HHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence            999999999875543333    333322  2344544568999999999999999988  999999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=3.7e-30  Score=195.86  Aligned_cols=141  Identities=28%  Similarity=0.518  Sum_probs=112.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC--CccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR--KEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~--~~~~~~~~DiwslG~il~~ll   78 (225)
                      ++||||||||+|||++..+  .|||||||++......-......|...|||||.+..  .+|+-. +|+||||+++||+.
T Consensus       187 lkiIHRDvKPSNILldr~G--~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiR-SDvWSLGITL~EvA  263 (361)
T KOG1006|consen  187 LKIIHRDVKPSNILLDRHG--DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIR-SDVWSLGITLYEVA  263 (361)
T ss_pred             hhhhhccCChhheEEecCC--CEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchh-hhhhhhcceEeeee
Confidence            3699999999999998777  699999999987665555555689999999999953  346655 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCC----CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIP----GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|.+||..+..   ....+..+....++.-    ...+++..++.||.-||.+|-..||...+++++||++..
T Consensus       264 tG~fPyr~w~s---vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  264 TGNFPYRKWDS---VFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             cCCCCcchHHH---HHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence            99999987543   3333334443332221    113488899999999999999999999999999999754

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=5.5e-29  Score=208.46  Aligned_cols=144  Identities=27%  Similarity=0.409  Sum_probs=106.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++..+  .+||+|||+++.......   .....||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       204 ~givHrDlkp~Nill~~~~--~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslGvil~el  280 (392)
T PHA03207        204 RGIIHRDVKTENIFLDEPE--NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAK-TDIWSAGLVLFEM  280 (392)
T ss_pred             CCccccCCCHHHEEEcCCC--CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998776  799999999875433222   223469999999999988877655 9999999999999


Q ss_pred             HhCCCCCCCCCCh---hHHHHHHHHHhccc-------------------------ccCCC---CCCCCHHHHHHHHhhcc
Q 027327           78 LVGAYPFEDPEDP---RNFKTTIQRILSVH-------------------------YSIPG---YVRVSLECRHLLSRIFV  126 (225)
Q Consensus        78 l~g~~pf~~~~~~---~~~~~~~~~~~~~~-------------------------~~~~~---~~~~~~~~~~li~~~l~  126 (225)
                      ++|+.||.+....   ..+..+...+....                         +..+.   ...++.++.+||++||.
T Consensus       281 ~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~  360 (392)
T PHA03207        281 SVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLT  360 (392)
T ss_pred             HHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhc
Confidence            9999999764422   11222211111000                         00010   01346688999999999


Q ss_pred             cCCCCCCCHHHHhcCcccCcC
Q 027327          127 ADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       127 ~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++|.+|||+.++|.||||.+.
T Consensus       361 ~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        361 FDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             cChhhCCCHHHHhhCchhhcc
Confidence            999999999999999999764

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=5.4e-29  Score=202.88  Aligned_cols=138  Identities=38%  Similarity=0.701  Sum_probs=108.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... .......||+.|+|||++.+..++.+ +|+||+||++|+|++
T Consensus       115 ~~ivHrdikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~  191 (316)
T cd05619         115 KGIVYRDLKLDNILLDTDG--HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTS-VDWWSFGVLLYEMLI  191 (316)
T ss_pred             CCeEeCCCCHHHEEECCCC--CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCch-hhhhhHHHHHHHHHh
Confidence            4899999999999998776  7999999998743222 22234568999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHH-HHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIP-EIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~-eil~hp~~~~~  147 (225)
                      |..||.......    ....+.......+.  .++.++++||.+||..+|.+||++. ++++||||...
T Consensus       192 G~~pf~~~~~~~----~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         192 GQSPFHGHDEEE----LFQSIRMDNPCYPR--WLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             CCCCCCCCCHHH----HHHHHHhCCCCCCc--cCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence            999997654322    22222222222332  4788999999999999999999996 89999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.96  E-value=4.9e-29  Score=204.03  Aligned_cols=142  Identities=34%  Similarity=0.572  Sum_probs=108.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++.... .......+||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       115 ~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~ell~  191 (327)
T cd05617         115 RGIIYRDLKLDNVLLDADG--HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFS-VDWWALGVLMFEMMA  191 (327)
T ss_pred             CCeeccCCCHHHEEEeCCC--CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCch-heeehhHHHHHHHHh
Confidence            4899999999999998776  799999999875322 223344579999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCCh---hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC------HHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDP---RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT------IPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s------~~eil~hp~~~~~  147 (225)
                      |+.||......   .........+.......|.  .++..+.++|++||+.||.+|++      ++++++||||...
T Consensus       192 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         192 GRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR--FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             CCCCCCccCCCcccccHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            99999643211   1112222333333333333  47899999999999999999998      5799999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6e-29  Score=219.02  Aligned_cols=142  Identities=37%  Similarity=0.577  Sum_probs=114.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccC----CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSR----KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~----~~~~~~~~DiwslG~il   74 (225)
                      +|+|||||||+|||++..|  ++||+|||.+..+.....  ....+|||-|.+||++..    ...++..+|+||+||++
T Consensus       194 mgyVHRDiKPDNvLld~~G--HikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~  271 (1317)
T KOG0612|consen  194 MGYVHRDIKPDNVLLDKSG--HIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFM  271 (1317)
T ss_pred             ccceeccCCcceeEecccC--cEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHH
Confidence            6999999999999998777  899999999876654433  345689999999999952    13345669999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcc--cccCCCCCCCCHHHHHHHHhhcccCCCCCCC---HHHHhcCcccCcCCC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYVRVSLECRHLLSRIFVADPEKRIT---IPEIQKHPWFLKNLP  149 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s---~~eil~hp~~~~~~~  149 (225)
                      |||+.|..||..    +.+.....+|+..  .+.+|....+|.++++||++++ -+|..|..   ++++..||||.+.-.
T Consensus       272 YEMlyG~TPFYa----dslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  272 YEMLYGETPFYA----DSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             HHHHcCCCcchH----HHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCCCh
Confidence            999999999987    4455566666655  4556655679999999999987 56999998   999999999976433

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.2e-29  Score=209.48  Aligned_cols=140  Identities=31%  Similarity=0.462  Sum_probs=112.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccc-----cCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVL-----SRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l-----~~~~~~~~~~DiwslG~il   74 (225)
                      .+|||||||..|||+.-+|  .++|+|||++..... .....+++|||+|||||++     ...+|+.+ +||||||+++
T Consensus       149 ~~iIHRDLKAGNiL~TldG--dirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDyk-aDiWSlGITL  225 (1187)
T KOG0579|consen  149 QNIIHRDLKAGNILLTLDG--DIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYK-ADIWSLGITL  225 (1187)
T ss_pred             cchhhhhccccceEEEecC--cEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhh-hhHHhhhhHH
Confidence            4799999999999998777  699999999754332 2334567999999999986     35667766 8999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      .+|..+.+|-...+....+.++..   ...+.+..+..++..+.+|+.+||.+||..||++.++++||||.+
T Consensus       226 IEMAqiEPPHhelnpMRVllKiaK---SePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  226 IEMAQIEPPHHELNPMRVLLKIAK---SEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             HHHhccCCCccccchHHHHHHHhh---cCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence            999999999877665544433321   223333445578999999999999999999999999999999975

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=9.5e-29  Score=198.57  Aligned_cols=141  Identities=30%  Similarity=0.493  Sum_probs=108.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.++  .++|+|||++.............|++.|+|||++.+..++.+ +|+||+|+++|+|++|
T Consensus       121 ~~iiH~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~~l~~l~~g  197 (285)
T cd05630         121 ERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS-PDWWALGCLLYEMIAG  197 (285)
T ss_pred             CCEEeCCCCHHHEEECCCC--CEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCc-cccHHHHHHHHHHHhC
Confidence            4899999999999998766  699999999875544333344578999999999988777655 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      +.||......................  ....+++++++|+.+||+.+|.+|||     +.++++||||.+
T Consensus       198 ~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         198 QSPFQQRKKKIKREEVERLVKEVQEE--YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             CCCCCCCCccchHHHHHhhhhhhhhh--cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            99998644322111111111111111  12357889999999999999999999     899999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=4.1e-29  Score=203.25  Aligned_cols=144  Identities=26%  Similarity=0.368  Sum_probs=99.4

Q ss_pred             CceEecCCCCCcEEEcCC--CCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGS--KAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~--~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+|||+...  ..+.+||+|||+++.......    .....+|+.|+|||++.+....+.++|||||||++
T Consensus       127 ~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il  206 (317)
T cd07867         127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF  206 (317)
T ss_pred             CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHH
Confidence            489999999999999432  223799999999975433221    22346899999999997655444559999999999


Q ss_pred             HHHHhCCCCCCCCCCh---------hHHHHHHHHHh------------------------ccccc--------CCCCCCC
Q 027327           75 YVMLVGAYPFEDPEDP---------RNFKTTIQRIL------------------------SVHYS--------IPGYVRV  113 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~---------~~~~~~~~~~~------------------------~~~~~--------~~~~~~~  113 (225)
                      |+|++|.+||......         ...........                        .....        .......
T Consensus       207 ~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (317)
T cd07867         207 AELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKP  286 (317)
T ss_pred             HHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCC
Confidence            9999999999653321         00111110000                        00000        0001123


Q ss_pred             CHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327          114 SLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus       114 ~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +..+.+||.+||..||.+|||+.|+|+||||
T Consensus       287 ~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         287 DSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             ChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            5568899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=9.2e-29  Score=206.39  Aligned_cols=142  Identities=37%  Similarity=0.572  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------------------------------------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------------------------------------------   38 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------------------------------------------   38 (225)
                      +|||||||||+|||++.++  ++||+|||+++......                                          
T Consensus       120 ~givHrDlKp~Nili~~~~--~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (381)
T cd05626         120 MGFIHRDIKPDNILIDLDG--HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRAT  197 (381)
T ss_pred             CCeeecCCcHHHEEECCCC--CEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccc
Confidence            4899999999999998766  79999999975321000                                          


Q ss_pred             ------CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCC
Q 027327           39 ------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR  112 (225)
Q Consensus        39 ------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (225)
                            .....+||+.|+|||++.+..++.+ +|||||||++|+|++|..||...........+..  .......+....
T Consensus       198 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~-~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~  274 (381)
T cd05626         198 KQHQRCLAHSLVGTPNYIAPEVLLRKGYTQL-CDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN--WENTLHIPPQVK  274 (381)
T ss_pred             ccccccccccccCCccccCHHHHcCCCCCCc-cceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHc--cccccCCCCCCC
Confidence                  0123469999999999988777655 9999999999999999999987554332222211  122234454456


Q ss_pred             CCHHHHHHHHhhcc--cCCCCCCCHHHHhcCcccCcC
Q 027327          113 VSLECRHLLSRIFV--ADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       113 ~~~~~~~li~~~l~--~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +++++++||.+|+.  .+|..|+++.++++||||...
T Consensus       275 ~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         275 LSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             CCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            89999999999654  455569999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=8.4e-29  Score=212.66  Aligned_cols=138  Identities=31%  Similarity=0.519  Sum_probs=109.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.....   .......||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       162 ~~IiHrDLKP~NILl~~~~--~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k-~DVwSlGvilyeL  238 (496)
T PTZ00283        162 KHMIHRDIKSANILLCSNG--LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKK-ADMFSLGVLLYEL  238 (496)
T ss_pred             CCEecCCCCHHHEEEeCCC--CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcH-HHHHHHHHHHHHH
Confidence            4899999999999998776  7999999998754322   22234579999999999988877655 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++|+.||......    .....+...... +....+++++.+|+.+||..+|.+||++.++++|||+..
T Consensus       239 ltG~~Pf~~~~~~----~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        239 LTLKRPFDGENME----EVMHKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHCCCCCCCCCHH----HHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            9999999765432    233333332221 233468899999999999999999999999999999864

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=1.9e-29  Score=206.54  Aligned_cols=140  Identities=32%  Similarity=0.567  Sum_probs=107.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccC------CccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSR------KEYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~------~~~~~~~~DiwslG~   72 (225)
                      .||+||||||+|||++.++  .+||+|||++........  .....||+.|+|||++..      ..++ .++|||||||
T Consensus       121 ~~i~H~Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~-~~~DiwslG~  197 (330)
T cd05601         121 MGYVHRDIKPENVLIDRTG--HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYG-VECDWWSLGV  197 (330)
T ss_pred             CCeEcccCchHheEECCCC--CEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCC-Ccceeecccc
Confidence            4899999999999998776  799999999975443322  223468999999999863      3343 4499999999


Q ss_pred             HHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           73 TLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        73 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++|+|++|+.||........+..+...  ......+....++..+++||++||. +|.+|||+.++++||||..
T Consensus       198 il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         198 IAYEMIYGRSPFHEGTSAKTYNNIMNF--QRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             eeeeeccCCCCCCCCCHHHHHHHHHcC--CCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            999999999999875543333322211  1122334444689999999999998 9999999999999999975

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=1.8e-28  Score=201.13  Aligned_cols=141  Identities=26%  Similarity=0.527  Sum_probs=104.1

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      +|+||||||+|||++.++  .+||+|||++...... ......++..|+|||++.+..++.+ +|+|||||++|+|++|+
T Consensus       124 ~ivH~dlkp~Nili~~~~--~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~il~~l~~g~  199 (333)
T cd06650         124 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQ-SDIWSMGLSLVEMAIGR  199 (333)
T ss_pred             CEEecCCChhhEEEcCCC--CEEEeeCCcchhhhhh-ccccCCCCccccCHHHhcCCCCCcH-HHHHHHHHHHHHHHHCC
Confidence            699999999999998766  6999999998754322 2234468999999999987777655 99999999999999999


Q ss_pred             CCCCCCCChhHHHHH-----------------------------------------HHHHhcccccCCCCCCCCHHHHHH
Q 027327           82 YPFEDPEDPRNFKTT-----------------------------------------IQRILSVHYSIPGYVRVSLECRHL  120 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~l  120 (225)
                      .||....... ....                                         ...+............++.++++|
T Consensus       200 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  278 (333)
T cd06650         200 YPIPPPDAKE-LELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDF  278 (333)
T ss_pred             CCCCCcchhH-HHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHH
Confidence            9997543211 1110                                         001111110001111357889999


Q ss_pred             HHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          121 LSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       121 i~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |.+||++||.+|||+.++++||||+..
T Consensus       279 i~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         279 VNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             HHHhccCCcccCcCHHHHhhCHHHhcC
Confidence            999999999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1.8e-28  Score=208.14  Aligned_cols=143  Identities=24%  Similarity=0.366  Sum_probs=102.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......   .....||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       279 ~gIvHrDLKP~NILl~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~-sDvwSlGviL~El  355 (461)
T PHA03211        279 EGIIHRDIKTENVLVNGPE--DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPS-VDIWSAGLVIFEA  355 (461)
T ss_pred             CCEEECcCCHHHEEECCCC--CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCch-HHHHHHHHHHHHH
Confidence            5899999999999998766  699999999875432211   123468999999999988877655 9999999999999


Q ss_pred             HhCCCCCCCCCC-------hhHHHHHHHHHhcccc--------------------------c---CCCCCCCCHHHHHHH
Q 027327           78 LVGAYPFEDPED-------PRNFKTTIQRILSVHY--------------------------S---IPGYVRVSLECRHLL  121 (225)
Q Consensus        78 l~g~~pf~~~~~-------~~~~~~~~~~~~~~~~--------------------------~---~~~~~~~~~~~~~li  121 (225)
                      ++|..|+.....       ...+..++........                          .   +.....++..+.+||
T Consensus       356 ~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  435 (461)
T PHA03211        356 AVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLV  435 (461)
T ss_pred             HHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHH
Confidence            998765432211       1122222221110000                          0   011123566899999


Q ss_pred             HhhcccCCCCCCCHHHHhcCcccCc
Q 027327          122 SRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       122 ~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      .+||..||.+|||+.|+|+||||+.
T Consensus       436 ~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        436 CRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHcccChhhCcCHHHHhhCcccCC
Confidence            9999999999999999999999964

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.96  E-value=8.2e-29  Score=198.88  Aligned_cols=140  Identities=29%  Similarity=0.495  Sum_probs=106.3

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC---ccCCCcccHHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK---EYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~---~~~~~~~DiwslG~il~~ll   78 (225)
                      ||+||||||+||+++.++  .+||+|||+++............+++.|+|||++.+.   .++ .++|+||+||++|+|+
T Consensus       128 ~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~~Di~slG~il~el~  204 (288)
T cd06616         128 KIIHRDVKPSNILLDRNG--NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYD-VRSDVWSLGITLYEVA  204 (288)
T ss_pred             CeeccCCCHHHEEEccCC--cEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCc-chhhhhHHHHHHHHHH
Confidence            799999999999998766  6999999998765443333445688899999998765   344 4599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhccc-ccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVH-YSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|+.||.....   ............ ...  .....++.++.+|+.+||..+|.+|||+.++++||||...
T Consensus       205 ~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         205 TGKFPYPKWNS---VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             hCCCCchhcch---HHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence            99999975431   112222222111 111  1123478899999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=7.3e-29  Score=207.06  Aligned_cols=140  Identities=38%  Similarity=0.609  Sum_probs=106.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-------------------------------------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-------------------------------------------   37 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-------------------------------------------   37 (225)
                      +|||||||||+|||++.++  ++||+|||++......                                           
T Consensus       120 ~~ivHrDlKp~NILl~~~g--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (382)
T cd05625         120 MGFIHRDIKPDNILIDRDG--HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAA  197 (382)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence            4899999999999998776  7999999997532100                                           


Q ss_pred             -----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCC
Q 027327           38 -----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR  112 (225)
Q Consensus        38 -----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (225)
                           ......+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...........+..  .......|....
T Consensus       198 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~-~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~p~~~~  274 (382)
T cd05625         198 RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-CDWWSVGVILYEMLVGQPPFLAQTPLETQMKVIN--WQTSLHIPPQAK  274 (382)
T ss_pred             cccccccccccccCcccCCHHHhcCCCCCCe-eeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHc--cCCCcCCCCccc
Confidence                 00123468999999999988888755 9999999999999999999987554332222221  112233444456


Q ss_pred             CCHHHHHHHHhhcccCCCCCCC---HHHHhcCcccCc
Q 027327          113 VSLECRHLLSRIFVADPEKRIT---IPEIQKHPWFLK  146 (225)
Q Consensus       113 ~~~~~~~li~~~l~~dP~~R~s---~~eil~hp~~~~  146 (225)
                      +++++.+||.+|+ .+|.+|++   +.++++||||..
T Consensus       275 ~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~  310 (382)
T cd05625         275 LSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT  310 (382)
T ss_pred             CCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence            8999999999986 59999997   999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.9e-29  Score=205.49  Aligned_cols=139  Identities=37%  Similarity=0.653  Sum_probs=107.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---------------------------------------CCC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---------------------------------------QPK   41 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---------------------------------------~~~   41 (225)
                      +||+||||||+|||++.++  .+||+|||+++......                                       ...
T Consensus       120 ~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (364)
T cd05599         120 LGYIHRDIKPDNLLLDAKG--HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAY  197 (364)
T ss_pred             CCeEeccCCHHHeEECCCC--CEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence            4899999999999998777  79999999986432111                                       011


Q ss_pred             CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhc--ccccCCCCCCCCHHHHH
Q 027327           42 STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRVSLECRH  119 (225)
Q Consensus        42 ~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  119 (225)
                      ..+||+.|+|||++.+..++.+ +|||||||++|+|++|..||.........    ..+..  .....+....+++++++
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~el~~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~  272 (364)
T cd05599         198 STVGTPDYIAPEVFLQTGYNKE-CDWWSLGVIMYEMLVGYPPFCSDNPQETY----RKIINWKETLQFPDEVPLSPEAKD  272 (364)
T ss_pred             ccccCccccCHHHHcCCCCCCe-eeeecchhHHHHhhcCCCCCCCCCHHHHH----HHHHcCCCccCCCCCCCCCHHHHH
Confidence            2468999999999988777655 99999999999999999999875543322    22222  12233444457899999


Q ss_pred             HHHhhcccCCCCCCC---HHHHhcCcccCcC
Q 027327          120 LLSRIFVADPEKRIT---IPEIQKHPWFLKN  147 (225)
Q Consensus       120 li~~~l~~dP~~R~s---~~eil~hp~~~~~  147 (225)
                      ||++||. +|.+|++   +.++++||||...
T Consensus       273 li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         273 LIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            9999996 9999998   9999999999764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=8.1e-29  Score=205.91  Aligned_cols=141  Identities=35%  Similarity=0.602  Sum_probs=107.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCc---cCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKE---YDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~---~~~~~~DiwslG~il~   75 (225)
                      +||+||||||+|||++.++  .+||+|||++........  ....+||+.|+|||++.+..   +.+.++|+|||||++|
T Consensus       161 ~~IvHrDLKp~NILl~~~~--~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ily  238 (370)
T cd05621         161 MGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF  238 (370)
T ss_pred             CCeEecCCCHHHEEECCCC--CEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHH
Confidence            4899999999999998776  799999999976533222  23457999999999986543   2334599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcc--cccCCCCCCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCcC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLKN  147 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~~  147 (225)
                      +|++|+.||........+    ..+...  ....|....++..+++++.+||..++.+  |+++.++++||||...
T Consensus       239 ell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         239 EMLVGDTPFYADSLVGTY----SKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHhCCCCCCCCCHHHHH----HHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            999999999875543333    333322  2334444467999999999999865543  8999999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.95  E-value=8.2e-29  Score=202.51  Aligned_cols=137  Identities=36%  Similarity=0.621  Sum_probs=108.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... ......+|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~giiHrDlkp~Nili~~~~--~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~  191 (325)
T cd05602         115 LNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRT-VDWWCLGAVLYEMLY  191 (325)
T ss_pred             CCeEecCCCHHHeEECCCC--CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCc-cccccccHHHHHHhc
Confidence            4899999999999998766  7999999998753322 22334579999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHH----HHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIP----EIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~----eil~hp~~~~  146 (225)
                      |..||........+    ..+.......  ...++..+.++|.+||+.+|.+|+++.    ++++|+||..
T Consensus       192 g~~pf~~~~~~~~~----~~i~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         192 GLPPFYSRNTAEMY----DNILNKPLQL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             CCCCCCCCCHHHHH----HHHHhCCcCC--CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence            99999865543322    2333322222  235899999999999999999999875    8999999965

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=2.1e-28  Score=210.57  Aligned_cols=144  Identities=25%  Similarity=0.382  Sum_probs=103.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......  ....+|++.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       286 ~gIiHrDLKP~NILl~~~~--~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell  362 (501)
T PHA03210        286 KKLIHRDIKLENIFLNCDG--KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEI-TDIWSCGLILLDML  362 (501)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcH-HHHHHHHHHHHHHH
Confidence            5899999999999998776  799999999976543322  223579999999999988887655 99999999999999


Q ss_pred             hCCCC-CCCCC--ChhHHHHHHHHHhcccccCC--------------------------CCCCCCHHHHHHHHhhcccCC
Q 027327           79 VGAYP-FEDPE--DPRNFKTTIQRILSVHYSIP--------------------------GYVRVSLECRHLLSRIFVADP  129 (225)
Q Consensus        79 ~g~~p-f~~~~--~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~dP  129 (225)
                      +|..+ |....  ....+.+.+..+......++                          ....++..+.++|.+||.+||
T Consensus       363 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP  442 (501)
T PHA03210        363 SHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDW  442 (501)
T ss_pred             HCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCc
Confidence            98754 43221  11222222211100000000                          011355677889999999999


Q ss_pred             CCCCCHHHHhcCcccCcC
Q 027327          130 EKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       130 ~~R~s~~eil~hp~~~~~  147 (225)
                      .+|||+.|+|.||||...
T Consensus       443 ~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        443 HLRPGAAELLALPLFSAE  460 (501)
T ss_pred             ccCcCHHHHhhChhhhcC
Confidence            999999999999999764

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=7.9e-29  Score=203.03  Aligned_cols=139  Identities=32%  Similarity=0.621  Sum_probs=123.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||+|||||+|++++.++  .+||.|||+|+........++++|||.|.|||++..+..+.. +|.||||+++|||++|
T Consensus       539 k~iIYRDLKPENllLd~~G--y~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~a-vDyWaLGIli~ELL~G  615 (732)
T KOG0614|consen  539 KGIIYRDLKPENLLLDNRG--YLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRA-VDYWALGILIYELLTG  615 (732)
T ss_pred             cCceeccCChhheeeccCC--ceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchh-hHHHHHHHHHHHHHcC
Confidence            6899999999999999887  799999999999999999999999999999999998888766 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      .+||.+..+...+..++..+-...+  |  ..++..+.+||+++...+|.+|..     +.+|.+|.||..
T Consensus       616 ~pPFs~~dpmktYn~ILkGid~i~~--P--r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  616 SPPFSGVDPMKTYNLILKGIDKIEF--P--RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             CCCCCCCchHHHHHHHHhhhhhhhc--c--cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            9999998887777766665544332  3  358899999999999999999995     789999999964

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.95  E-value=3e-28  Score=199.07  Aligned_cols=138  Identities=34%  Similarity=0.624  Sum_probs=109.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......||+.|+|||++.+..++.+ +|+||+||++|+|++
T Consensus       120 ~~ivHrDikp~Nill~~~~--~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~ellt  196 (323)
T cd05615         120 RGIIYRDLKLDNVMLDSEG--HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKS-VDWWAYGVLLYEMLA  196 (323)
T ss_pred             CCeeccCCCHHHeEECCCC--CEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCc-cchhhhHHHHHHHHh
Confidence            4899999999999998776  7999999998753322 22334568999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~~  147 (225)
                      |+.||......    .....+.......|  ..++.++++|+.+||..+|.+|++     .+++++||||...
T Consensus       197 G~~pf~~~~~~----~~~~~i~~~~~~~p--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         197 GQPPFDGEDED----ELFQSIMEHNVSYP--KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CCCCCCCCCHH----HHHHHHHhCCCCCC--ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            99999875443    23333444433333  357899999999999999999997     4789999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.95  E-value=7.4e-29  Score=202.76  Aligned_cols=138  Identities=34%  Similarity=0.574  Sum_probs=108.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++.... ........|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~givH~Dlkp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~  191 (325)
T cd05604         115 INIVYRDLKPENILLDSQG--HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT-VDWWCLGAVLYEMLY  191 (325)
T ss_pred             CCeeecCCCHHHeEECCCC--CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCc-Cccccccceehhhhc
Confidence            5899999999999998777  799999999875322 222334569999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH----HHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI----PEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~----~eil~hp~~~~~  147 (225)
                      |..||.......    ....+.......+  +..+..+.++|++||..+|.+||++    .++++||||...
T Consensus       192 G~~pf~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         192 GLPPFYCRDVAE----MYDNILHKPLVLR--PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCccCC--CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence            999998654432    2333333332222  3578999999999999999999976    589999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=4e-28  Score=194.42  Aligned_cols=142  Identities=25%  Similarity=0.382  Sum_probs=102.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .+||+|||+++...... ......+++.|+|||++.+....+.++|||||||++|+|++
T Consensus       118 ~~i~H~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~t  195 (284)
T cd07839         118 HNVLHRDLKPQNLLINKNG--ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN  195 (284)
T ss_pred             CCEecCCCCHHHEEEcCCC--cEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987543322 22234678899999998765543455999999999999999


Q ss_pred             CCCCCCCCCCh-hHHHHHHHHHhc-------------ccccC----------CCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDP-RNFKTTIQRILS-------------VHYSI----------PGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~-~~~~~~~~~~~~-------------~~~~~----------~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |..||...... ..+..+......             .....          .....++.++++||.+||..||.+|||+
T Consensus       196 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~  275 (284)
T cd07839         196 AGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISA  275 (284)
T ss_pred             cCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCH
Confidence            98886443332 222221111100             00000          0112467899999999999999999999


Q ss_pred             HHHhcCccc
Q 027327          136 PEIQKHPWF  144 (225)
Q Consensus       136 ~eil~hp~~  144 (225)
                      +++++||||
T Consensus       276 ~~il~h~~f  284 (284)
T cd07839         276 EEALQHPYF  284 (284)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=4e-28  Score=194.93  Aligned_cols=142  Identities=29%  Similarity=0.503  Sum_probs=111.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+||+++.++  .+||+|||++.............|+..|+|||++.+..++.+ +|+||+||++|+|++|
T Consensus       121 ~~iiH~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~-~Di~slG~~l~~l~~g  197 (285)
T cd05632         121 ENTVYRDLKPENILLDDYG--HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLS-PDYWGLGCLIYEMIEG  197 (285)
T ss_pred             CCeeecCCCHHHEEECCCC--CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcc-cchHHHHHHHHHHHhC
Confidence            4899999999999998766  799999999875443333344578999999999987777655 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~~  147 (225)
                      ..||...............+.......  ...++.++.+|+.+||..+|.+||+     +.++++|+||...
T Consensus       198 ~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         198 QSPFRGRKEKVKREEVDRRVLETEEVY--SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             CCCCCCCCHHHHHHHHHHhhhcccccc--CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            999986544333333333333322222  2357889999999999999999999     8899999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=3.5e-28  Score=196.57  Aligned_cols=144  Identities=26%  Similarity=0.428  Sum_probs=105.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||++....... ......+++.|+|||++.+....+.++|||||||++|+|++
T Consensus       123 ~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t  200 (301)
T cd07873         123 RKVLHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMST  200 (301)
T ss_pred             CCeeCCCCCHHHEEECCCC--cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987543322 22334578899999998765544455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc---------------cccCCC---------CCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV---------------HYSIPG---------YVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~~---------~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||...........+.......               ....+.         ...++..+++||.+||+.||.+|||+
T Consensus       201 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~  280 (301)
T cd07873         201 GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA  280 (301)
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence            999998655433222221111000               001111         12467889999999999999999999


Q ss_pred             HHHhcCcccCc
Q 027327          136 PEIQKHPWFLK  146 (225)
Q Consensus       136 ~eil~hp~~~~  146 (225)
                      .++++||||..
T Consensus       281 ~eil~h~~f~~  291 (301)
T cd07873         281 EEAMKHPYFHC  291 (301)
T ss_pred             HHHhcCccccc
Confidence            99999999964

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=8.6e-29  Score=205.09  Aligned_cols=141  Identities=35%  Similarity=0.604  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------------------------------------CCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------------------------------------QPKSTV   44 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------------------------------------~~~~~~   44 (225)
                      +||+||||||+|||++.++  .+||+|||++.......                                    .....+
T Consensus       120 ~givHrDLkp~NIli~~~~--~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (360)
T cd05627         120 LGFIHRDIKPDNLLLDAKG--HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTV  197 (360)
T ss_pred             CCeEccCCCHHHEEECCCC--CEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccC
Confidence            5899999999999998766  79999999986432110                                    012346


Q ss_pred             cCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhh
Q 027327           45 GTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRI  124 (225)
Q Consensus        45 g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  124 (225)
                      ||+.|+|||++.+..++.+ +|+|||||++|+|++|+.||........+..+..  .......|....++.++++||.+|
T Consensus       198 gt~~Y~APE~~~~~~~~~~-~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~--~~~~~~~p~~~~~s~~~~~li~~l  274 (360)
T cd05627         198 GTPDYIAPEVFMQTGYNKL-CDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMN--WKETLVFPPEVPISEKAKDLILRF  274 (360)
T ss_pred             CCccccCHHHHcCCCCCCc-ceeccccceeeecccCCCCCCCCCHHHHHHHHHc--CCCceecCCCCCCCHHHHHHHHHh
Confidence            9999999999988888755 9999999999999999999987554333222221  012233344445789999999998


Q ss_pred             cccCCCCCC---CHHHHhcCcccCcC
Q 027327          125 FVADPEKRI---TIPEIQKHPWFLKN  147 (225)
Q Consensus       125 l~~dP~~R~---s~~eil~hp~~~~~  147 (225)
                      + .+|.+|+   ++.++++||||...
T Consensus       275 ~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         275 C-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             c-cChhhcCCCCCHHHHhcCCCCCCC
Confidence            7 4999998   48999999999763

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=4e-28  Score=194.42  Aligned_cols=142  Identities=25%  Similarity=0.367  Sum_probs=104.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++........ .....+++.|+|||++.+....+.++|+|||||++|+|++
T Consensus       120 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t  197 (285)
T cd07861         120 RRVLHRDLKPQNLLIDNKG--VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT  197 (285)
T ss_pred             CCeeecCCCHHHEEEcCCC--cEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHH
Confidence            4899999999999998776  799999999875433222 1233578899999998765433455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc--------------c---------ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV--------------H---------YSIPGYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~--------------~---------~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||...................              .         ........++.++++||++||..||.+|||+.
T Consensus       198 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~  277 (285)
T cd07861         198 KKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK  277 (285)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence            999998654433222221111000              0         00001234788999999999999999999999


Q ss_pred             HHhcCccc
Q 027327          137 EIQKHPWF  144 (225)
Q Consensus       137 eil~hp~~  144 (225)
                      +|+.||||
T Consensus       278 ~ll~~~~~  285 (285)
T cd07861         278 KALNHPYF  285 (285)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=4e-28  Score=207.95  Aligned_cols=138  Identities=35%  Similarity=0.540  Sum_probs=109.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|||||||||+|||++.++  .+||+|||+++.......   ....+||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       188 ~~ivHrDlkp~NIll~~~~--~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el  264 (478)
T PTZ00267        188 RKMMHRDLKSANIFLMPTG--IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKK-ADMWSLGVILYEL  264 (478)
T ss_pred             CCEEECCcCHHhEEECCCC--cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcH-HhHHHHHHHHHHH
Confidence            4899999999999998776  799999999986533221   234569999999999988777655 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++|+.||......    .....+...... +....++..+++||.+||..+|++||++.+++.|+|+..
T Consensus       265 ~tg~~Pf~~~~~~----~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        265 LTLHRPFKGPSQR----EIMQQVLYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HhCCCCCCCCCHH----HHHHHHHhCCCC-CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            9999999765432    233333332222 222357899999999999999999999999999999863

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.95  E-value=2.1e-28  Score=199.73  Aligned_cols=138  Identities=34%  Similarity=0.554  Sum_probs=108.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++.... ........|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       115 ~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~  191 (321)
T cd05603         115 LNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRT-VDWWCLGAVLYEMLY  191 (321)
T ss_pred             CCeEeccCCHHHeEECCCC--CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCc-Ccccccchhhhhhhc
Confidence            4899999999999998776  799999999875322 222334568999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH----HHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI----PEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~----~eil~hp~~~~~  147 (225)
                      |..||......    .....+.......+  ...+..+.++|.+||+.+|.+|+++    .++++|+||...
T Consensus       192 g~~pf~~~~~~----~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         192 GLPPFYSRDVS----QMYDNILHKPLQLP--GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             CCCCCCCCCHH----HHHHHHhcCCCCCC--CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence            99999775432    23333333333333  3478899999999999999999975    599999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=8.5e-28  Score=190.31  Aligned_cols=137  Identities=35%  Similarity=0.482  Sum_probs=105.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||+|+||+++.++  .++|+|||+++........    ....++..|+|||++.+..++.+ +|+||||+++|+
T Consensus       123 ~~i~H~dl~p~nilv~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~e  199 (263)
T cd06625         123 NMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRK-ADVWSVGCTVVE  199 (263)
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCch-hhhHHHHHHHHH
Confidence            4899999999999998766  7999999998754322111    23457889999999988776544 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |++|+.||...........    .............++..+.+||.+||..+|.+|||+.++++||||
T Consensus       200 l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         200 MLTEKPPWAEFEAMAAIFK----IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHhCCCCccccchHHHHHH----HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            9999999976544322222    222222222233578899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.5e-28  Score=190.86  Aligned_cols=138  Identities=38%  Similarity=0.652  Sum_probs=116.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCC-CCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-VLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .+||+||||.+|.|++.++  ++||+|||+++.. ......++++|||.|+|||++....|... +|+|.+|+++|||++
T Consensus       287 ~~ivYRDlKLENLlLDkDG--HIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgra-VDWWG~GVVMYEMmC  363 (516)
T KOG0690|consen  287 RNIVYRDLKLENLLLDKDG--HIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRA-VDWWGVGVVMYEMMC  363 (516)
T ss_pred             CCeeeeechhhhheeccCC--ceEeeecccchhcccccceeccccCChhhcCchhhccccccce-eehhhhhHHHHHHHh
Confidence            4799999999999999887  8999999999853 44566778899999999999998888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||.+....    +.+.-++.....+|.  .++++++.|+..+|.+||.+|.     .+.+|++|+||..-
T Consensus       364 GRLPFyn~dh~----kLFeLIl~ed~kFPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  364 GRLPFYNKDHE----KLFELILMEDLKFPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             ccCcccccchh----HHHHHHHhhhccCCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence            99999876553    333344444555554  5899999999999999999999     48999999999754

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-28  Score=204.51  Aligned_cols=140  Identities=32%  Similarity=0.586  Sum_probs=105.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------------------------------------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------------------------------------------   38 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------------------------------------------   38 (225)
                      +||+||||||+|||++.++  .+||+|||+++......                                          
T Consensus       120 ~givHrDlkp~NIll~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (377)
T cd05629         120 LGFIHRDIKPDNILIDRGG--HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATW  197 (377)
T ss_pred             CCeeccCCCHHHEEECCCC--CEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence            4899999999999998766  79999999985321100                                          


Q ss_pred             ------CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCC
Q 027327           39 ------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR  112 (225)
Q Consensus        39 ------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (225)
                            .....+||+.|+|||++.+..++.+ +|||||||++|+|++|..||........+..+...  ......|....
T Consensus       198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~  274 (377)
T cd05629         198 KKNRRLMAYSTVGTPDYIAPEIFLQQGYGQE-CDWWSLGAIMFECLIGWPPFCSENSHETYRKIINW--RETLYFPDDIH  274 (377)
T ss_pred             hhcccccccccCCCccccCHHHHccCCCCCc-eeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHcc--CCccCCCCCCC
Confidence                  0012468999999999988777655 99999999999999999999775543332222211  12233344446


Q ss_pred             CCHHHHHHHHhhcccCCCCC---CCHHHHhcCcccCc
Q 027327          113 VSLECRHLLSRIFVADPEKR---ITIPEIQKHPWFLK  146 (225)
Q Consensus       113 ~~~~~~~li~~~l~~dP~~R---~s~~eil~hp~~~~  146 (225)
                      ++.++++||.+||. +|.+|   +++.++++||||..
T Consensus       275 ~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         275 LSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             CCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            88999999999997 77765   59999999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=2.3e-28  Score=203.33  Aligned_cols=141  Identities=36%  Similarity=0.588  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCc---cCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKE---YDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~---~~~~~~DiwslG~il~   75 (225)
                      +||+||||||+|||++.++  .+||+|||+++......  .....+||+.|+|||++.+..   ..+.++|||||||++|
T Consensus       161 ~~ivHrDLkp~NIll~~~~--~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvily  238 (371)
T cd05622         161 MGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY  238 (371)
T ss_pred             CCEEeCCCCHHHEEECCCC--CEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHH
Confidence            4899999999999998776  79999999987543322  223457999999999986543   2334599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcc--cccCCCCCCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCcC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLKN  147 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~~  147 (225)
                      +|++|..||.......    ....+...  ....+....++..+++||.+||...+.+  |+++.++++|+||.+.
T Consensus       239 ell~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         239 EMLVGDTPFYADSLVG----TYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHhCCCCCCCCCHHH----HHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            9999999998755432    23333332  2334444568999999999999844433  7899999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=4.6e-28  Score=193.71  Aligned_cols=141  Identities=28%  Similarity=0.479  Sum_probs=105.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++. +  .+||+|||++.............++..|+|||.+......+.++|+|||||++|+|++|
T Consensus       119 ~~i~H~dl~p~ni~l~~-~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~  195 (282)
T cd07831         119 NGIFHRDIKPENILIKD-D--ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSL  195 (282)
T ss_pred             CCceecccCHHHEEEcC-C--CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcC
Confidence            48999999999999987 4  79999999997654444434456888999999876544444559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc--------------ccccCCC---------CCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS--------------VHYSIPG---------YVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~--------------~~~~~~~---------~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      ..||...+..............              ..+..+.         ...++..+++||.+||.++|.+||++.+
T Consensus       196 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  275 (282)
T cd07831         196 FPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQ  275 (282)
T ss_pred             CcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHH
Confidence            9999776543322222111100              0011111         1246789999999999999999999999


Q ss_pred             HhcCccc
Q 027327          138 IQKHPWF  144 (225)
Q Consensus       138 il~hp~~  144 (225)
                      +++||||
T Consensus       276 ~l~~~~~  282 (282)
T cd07831         276 ALRHPYF  282 (282)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.95  E-value=8.7e-29  Score=201.74  Aligned_cols=138  Identities=39%  Similarity=0.665  Sum_probs=109.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||+++..... .......|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       117 ~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~t  193 (318)
T cd05582         117 LGIIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS-ADWWSFGVLMFEMLT  193 (318)
T ss_pred             CCEecCCCCHHHeEECCCC--cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCc-cceeccceEeeeecc
Confidence            4899999999999998776  7999999998754333 22334568999999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~~  147 (225)
                      |+.||.......    ....+.......+.  .++..+.+||++||+.||.+||+     +.+++.||||...
T Consensus       194 g~~p~~~~~~~~----~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         194 GSLPFQGKDRKE----TMTMILKAKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            999998654332    23333333333333  47899999999999999999999     6779999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=1.1e-27  Score=196.70  Aligned_cols=147  Identities=28%  Similarity=0.441  Sum_probs=104.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++........    .....+++.|+|||.+.+....+.++|+||+||++|+
T Consensus       125 ~~ivH~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~e  202 (336)
T cd07849         125 ANVLHRDLKPSNLLLNTNC--DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAE  202 (336)
T ss_pred             CCeeccCCCHHHEEECCCC--CEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHH
Confidence            4899999999999998776  799999999875432221    1234678999999987654333455999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHH-----------h--------c-c--cccCC---CCCCCCHHHHHHHHhhcccCCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRI-----------L--------S-V--HYSIP---GYVRVSLECRHLLSRIFVADPEK  131 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~-----------~--------~-~--~~~~~---~~~~~~~~~~~li~~~l~~dP~~  131 (225)
                      |++|+.||................           .        . .  ....+   ..+..+.++.+||.+||+.+|.+
T Consensus       203 l~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  282 (336)
T cd07849         203 MLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHK  282 (336)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhh
Confidence            999999997643222111111000           0        0 0  00000   11246788999999999999999


Q ss_pred             CCCHHHHhcCcccCcCCC
Q 027327          132 RITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       132 R~s~~eil~hp~~~~~~~  149 (225)
                      |||+.++++||||.+...
T Consensus       283 Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         283 RITVEEALAHPYLEQYHD  300 (336)
T ss_pred             CcCHHHHhcCccccccCC
Confidence            999999999999987644

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6.2e-29  Score=210.22  Aligned_cols=142  Identities=32%  Similarity=0.491  Sum_probs=111.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCC-ccCCCcccHHHHHHHHHHHHh
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRK-EYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~-~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|||||||-+|+|++. ..+.+||+|||-+++...-. ...++.||..|||||++..+ ..+++++|||||||++.||.+
T Consensus       695 ~IVHRDIKGDNVLvNT-ySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMAT  773 (1226)
T KOG4279|consen  695 KIVHRDIKGDNVLVNT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMAT  773 (1226)
T ss_pred             ceeeccccCCcEEEee-ccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeecc
Confidence            6999999999999974 34489999999998755443 34566799999999999644 345677999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |++||.....+.   ..+-++.-.....|.+..++.+++.||.+|+.++|..||+|.++|++||+...
T Consensus       774 GrPPF~Elgspq---AAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  774 GRPPFVELGSPQ---AAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             CCCCeeecCChh---HhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            999998766543   22222222222223334588999999999999999999999999999998754

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=2e-28  Score=203.98  Aligned_cols=140  Identities=38%  Similarity=0.604  Sum_probs=106.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-------------------------------------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-------------------------------------------   37 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-------------------------------------------   37 (225)
                      +||+||||||+|||++.++  .+||+|||+|......                                           
T Consensus       120 ~~ivHrDlkp~Nill~~~~--~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (376)
T cd05598         120 MGFIHRDIKPDNILIDRDG--HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQ  197 (376)
T ss_pred             CCeEeCCCCHHHEEECCCC--CEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcc
Confidence            4899999999999998766  7999999997422100                                           


Q ss_pred             -CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHH
Q 027327           38 -SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE  116 (225)
Q Consensus        38 -~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (225)
                       ......+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...........+..  .......+....++.+
T Consensus       198 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~  274 (376)
T cd05598         198 RCLAHSLVGTPNYIAPEVLLRTGYTQL-CDWWSVGVILYEMLVGQPPFLADTPAETQLKVIN--WETTLHIPSQAKLSRE  274 (376)
T ss_pred             cccccccCCCccccCHHHHcCCCCCcc-eeeeeccceeeehhhCCCCCCCCCHHHHHHHHhc--cCccccCCCCCCCCHH
Confidence             00112469999999999988877655 9999999999999999999987654332222211  1122333444568999


Q ss_pred             HHHHHHhhcccCCCCCC---CHHHHhcCcccCc
Q 027327          117 CRHLLSRIFVADPEKRI---TIPEIQKHPWFLK  146 (225)
Q Consensus       117 ~~~li~~~l~~dP~~R~---s~~eil~hp~~~~  146 (225)
                      +.+||.+|+ .+|.+|+   ++.++++||||..
T Consensus       275 ~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         275 ASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             HHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            999999987 5999999   9999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=1e-27  Score=190.85  Aligned_cols=137  Identities=30%  Similarity=0.439  Sum_probs=103.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccC-----CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+||+++.++  .+||+|||++...... .......|++.|+|||++.+     ..++.+ +|+||+||++
T Consensus       130 ~~ivh~dl~~~nili~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~-~Dv~slGv~l  206 (272)
T cd06637         130 HKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFK-SDLWSLGITA  206 (272)
T ss_pred             CCCccCCCCHHHEEECCCC--CEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCch-hhHHHHHHHH
Confidence            4899999999999998776  6999999998754322 22234468899999999863     234444 9999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+|++|..||..........    ..............++..+++|+.+||..+|.+|||+.++++||||
T Consensus       207 ~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         207 IEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHhCCCCccccCHHHHHH----HHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            99999999997544322221    1112222222233578899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=1.7e-27  Score=190.60  Aligned_cols=143  Identities=28%  Similarity=0.518  Sum_probs=107.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+|+||||+|||++.++  .+||+|||++...... ......++..|+|||++.+..++.+ +|+||||+++|+|++|
T Consensus       114 ~~i~H~dlkp~Nill~~~~--~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~~l~~g  189 (279)
T cd06619         114 LKILHRDVKPSNMLVNTRG--QVKLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQYGIH-SDVWSLGISFMELALG  189 (279)
T ss_pred             CCEeeCCCCHHHEEECCCC--CEEEeeCCcceecccc-cccCCCCChhhcCceeecCCCCCCc-chHHHHHHHHHHHHhC
Confidence            4899999999999998776  7999999998754322 2334578999999999987777655 9999999999999999


Q ss_pred             CCCCCCCCChhH---HHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRN---FKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||........   .......+............+++++++|+.+||..+|.+||+++++++||||...
T Consensus       190 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         190 RFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             CCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            999965322111   1111222221111111223478899999999999999999999999999999654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.95  E-value=1e-27  Score=194.53  Aligned_cols=145  Identities=28%  Similarity=0.379  Sum_probs=107.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++||||||+||+++.++  .+||+|||++....... ......+++.|+|||++.+....+.++|+|||||++|+|++
T Consensus       127 ~~i~H~dl~p~nil~~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~  204 (309)
T cd07845         127 NFIIHRDLKVSNLLLTDKG--CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLA  204 (309)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHh
Confidence            4899999999999998766  79999999987654332 22233467889999998764433455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc---------------cccCCC---------CCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV---------------HYSIPG---------YVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~~---------~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||...+....+..........               .+..+.         ....++.+.+||.+||..||++|||+
T Consensus       205 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~  284 (309)
T cd07845         205 HKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATA  284 (309)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCH
Confidence            999998766544433333211100               000000         11257889999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .++++||||...
T Consensus       285 ~~il~h~~f~~~  296 (309)
T cd07845         285 EEALESSYFKEK  296 (309)
T ss_pred             HHHhcChhhccC
Confidence            999999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.95  E-value=7.7e-28  Score=190.76  Aligned_cols=139  Identities=35%  Similarity=0.476  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-----CCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+||+++.++  .+||+|||++.........     ....++..|+|||.+......+.++|+||||+++|
T Consensus       121 ~~i~h~~l~p~ni~~~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~  198 (267)
T cd06610         121 NGQIHRDIKAGNILLGEDG--SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAI  198 (267)
T ss_pred             CCeecCCCCHHhEEEcCCC--CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHH
Confidence            4899999999999998766  6999999998754433222     33468889999999876633344599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCC---CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG---YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +|++|..||........+......   .....+.   ...++..+++|+.+||..+|.+||++.++++||||
T Consensus       199 ~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         199 ELATGAAPYSKYPPMKVLMLTLQN---DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHhCCCCccccChhhhHHHHhcC---CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            999999999765544333332221   1111111   13578899999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.95  E-value=6e-29  Score=206.25  Aligned_cols=134  Identities=34%  Similarity=0.486  Sum_probs=113.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      +|||||||.-||||..+.  .|||+|||-++......+...++||..|||||++...+.+.+ +|||||||++||||||.
T Consensus       232 KIIHRDLKSPNiLIs~~d--~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEK-VDIwSfGVVLWEmLT~E  308 (904)
T KOG4721|consen  232 KIIHRDLKSPNILISYDD--VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEK-VDIWSFGVVLWEMLTGE  308 (904)
T ss_pred             hHhhhccCCCceEeeccc--eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccc-cceehhHHHHHHHHhcC
Confidence            589999999999998766  799999999987766666677899999999999999888766 99999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      .||.+....    .++..+......+|.+..++.-++-||+.||+-.|.+||++.+|+.|-
T Consensus       309 iPYkdVdss----AIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  309 IPYKDVDSS----AIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             CCccccchh----eeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence            999864432    333334444455666667899999999999999999999999999984

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.95  E-value=2.9e-29  Score=194.43  Aligned_cols=146  Identities=27%  Similarity=0.409  Sum_probs=114.7

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      -||||||..|||++..+  +.||+|||+|....... ...+.+|||.|||||++..-.|... +||||||++..||..|+
T Consensus       150 KIHRDIKAGNILLNT~G--~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~-ADIWSLGITaIEMAEG~  226 (502)
T KOG0574|consen  150 KIHRDIKAGNILLNTDG--IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTK-ADIWSLGITAIEMAEGR  226 (502)
T ss_pred             HHHhhcccccEEEcccc--hhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchh-hhHhhhcchhhhhhcCC
Confidence            48999999999998777  79999999998765443 2345679999999999998899877 89999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCccccc
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFME  154 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~~~~  154 (225)
                      +||....+.+.+   +--...+...+..+..+|.++.+|+++||.+.|++|.||.++++|||+++......+.
T Consensus       227 PPYsDIHPMRAI---FMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~I~~  296 (502)
T KOG0574|consen  227 PPYSDIHPMRAI---FMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCDIMQ  296 (502)
T ss_pred             CCccccccccee---EeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcccHHH
Confidence            999875543221   1111112222222335888999999999999999999999999999998876655443

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=3.1e-27  Score=193.72  Aligned_cols=177  Identities=26%  Similarity=0.329  Sum_probs=117.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+||+++.++  .+||+|||+++.......     .....|++.|+|||.+.+....+.++|+||+|+++|
T Consensus       124 ~givH~dlkp~Nili~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~  201 (332)
T cd07857         124 ANVLHRDLKPGNLLVNADC--ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILA  201 (332)
T ss_pred             CCcccCCCCHHHeEEcCCC--CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHH
Confidence            4899999999999998776  799999999875432211     123468899999998765433345599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHh-----------c--------c--c---ccC-CCCCCCCHHHHHHHHhhcccCCC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRIL-----------S--------V--H---YSI-PGYVRVSLECRHLLSRIFVADPE  130 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~-----------~--------~--~---~~~-~~~~~~~~~~~~li~~~l~~dP~  130 (225)
                      +|++|..||........+........           .        .  .   ... ......+..+++|+.+||+.+|.
T Consensus       202 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  281 (332)
T cd07857         202 ELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPT  281 (332)
T ss_pred             HHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcc
Confidence            99999999976543322222111100           0        0  0   000 01123578899999999999999


Q ss_pred             CCCCHHHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHHHH
Q 027327          131 KRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE  181 (225)
Q Consensus       131 ~R~s~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (225)
                      +|||+.+++.|||+.+.........  -.......-....+++++++.+.+
T Consensus       282 ~R~t~~~ll~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  330 (332)
T cd07857         282 KRISVEEALEHPYLAIWHDPDDEPV--CQKPFDFSFESEDSMEELRDMIIE  330 (332)
T ss_pred             cCCCHHHHhcChhhhhhcCcccccc--ccccccCCccccccHHHHHHHHhh
Confidence            9999999999999976543221111  111112223345567777766654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.95  E-value=2.4e-27  Score=187.07  Aligned_cols=136  Identities=29%  Similarity=0.507  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .++|+|||++....... ......+++.|+|||++.+..++.+ +|+||||+++|+|++
T Consensus       121 ~~i~H~di~p~nil~~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~~l~~  197 (257)
T cd08223         121 KHILHRDLKTQNVFLTRTN--IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYK-SDVWALGCCVYEMAT  197 (257)
T ss_pred             CCeeccCCCchhEEEecCC--cEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCch-hhhHHHHHHHHHHHc
Confidence            4899999999999998766  79999999987543322 2233468889999999988777655 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+.||.......    ....+...... +....++..+.+|+.+||..+|.+||++.++++||||
T Consensus       198 g~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         198 LKHAFNAKDMNS----LVYRIIEGKLP-PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             CCCCCCCCCHHH----HHHHHHhcCCC-CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            999997644322    22222222221 1223578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=2.4e-28  Score=200.32  Aligned_cols=140  Identities=33%  Similarity=0.489  Sum_probs=118.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      ++|+|||||+.|||++.++  .|||+|||+|+...... ...+.+||+.||+||++.+.+|..+ +|||||||++|||++
T Consensus       125 ~~iLHRDlK~~Nifltk~~--~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~K-SDiWsLGC~~yEm~~  201 (426)
T KOG0589|consen  125 NRVLHRDLKCANIFLTKDK--KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEK-SDIWSLGCCLYEMCT  201 (426)
T ss_pred             hhhhcccchhhhhhccccC--ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCcc-CcchhhcchHHHHHh
Confidence            4799999999999998777  68999999999887766 5667789999999999999999877 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      -+.+|...+..    ..+.++.... ..|....++.+++.+|+.||..+|..||++.++|.+|......
T Consensus       202 lk~aF~a~~m~----~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~~  265 (426)
T KOG0589|consen  202 LKPAFKASNMS----ELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRYL  265 (426)
T ss_pred             cccccCccchH----HHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhHH
Confidence            99999876553    3444444443 2244446899999999999999999999999999999876543

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=6.4e-28  Score=193.39  Aligned_cols=135  Identities=35%  Similarity=0.652  Sum_probs=121.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      ++||||||.+|||++.++  ++||+|||++..+.......+++|+|.|.+||++.+.+|.+..+|.||||+++|.|+.|.
T Consensus       173 rVvHRDLKLENILLD~N~--NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGt  250 (668)
T KOG0611|consen  173 RVVHRDLKLENILLDQNN--NIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGT  250 (668)
T ss_pred             cceecccchhheeecCCC--CeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcc
Confidence            789999999999999888  799999999998888888889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      -||.+..    ....++.+....+..|.   .+..+.-||+.||.+||.+|.|+.+|-.|=|+.
T Consensus       251 MPFDG~D----hk~lvrQIs~GaYrEP~---~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  251 MPFDGRD----HKRLVRQISRGAYREPE---TPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             cccCCch----HHHHHHHhhcccccCCC---CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence            9998844    35666777788887776   467889999999999999999999999997764

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=6.7e-28  Score=190.40  Aligned_cols=140  Identities=40%  Similarity=0.671  Sum_probs=104.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCC-CCCCCCCCcccCCCCCcccccc-CCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-VLHSQPKSTVGTPAYIAPEVLS-RKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~g~~~y~aPE~l~-~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .++|+|||.+... ..........++..|+|||++. +..+. .++|+||||+++|+|+
T Consensus       117 ~~i~H~dikp~NIl~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~~Di~slG~il~~l~  193 (260)
T PF00069_consen  117 KGIVHRDIKPENILLDENG--EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYT-RKSDIWSLGIILYELL  193 (260)
T ss_dssp             TTEEESSBSGGGEEESTTS--EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBS-THHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence            4899999999999998666  7999999998753 2233334557899999999997 45554 5599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +|..||........ .....+......  ........+..+.++|.+||..+|++||++.++++||||
T Consensus       194 ~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  194 TGKLPFEESNSDDQ-LEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HSSSSSTTSSHHHH-HHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             ccccccccccchhh-hhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            99999987632222 222222222111  111111234799999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.95  E-value=2.6e-27  Score=189.69  Aligned_cols=142  Identities=27%  Similarity=0.411  Sum_probs=105.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++||||+|+||+++.++  .+||+|||++....... ......+++.|+|||++.+....+.++|+||||+++|+|++
T Consensus       119 ~~i~H~~l~p~nill~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t  196 (284)
T cd07860         119 HRVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT  196 (284)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH
Confidence            4799999999999998776  79999999987543322 22233578899999998765544455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc--------------ccCC---------CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH--------------YSIP---------GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~--------------~~~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||....................              ...+         ....++.+++++|.+||..||.+|||+.
T Consensus       197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  276 (284)
T cd07860         197 RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAK  276 (284)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHH
Confidence            9999987654433333222111000              0000         0124678899999999999999999999


Q ss_pred             HHhcCccc
Q 027327          137 EIQKHPWF  144 (225)
Q Consensus       137 eil~hp~~  144 (225)
                      ++++||||
T Consensus       277 ~~l~~~~f  284 (284)
T cd07860         277 AALAHPFF  284 (284)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=2.5e-27  Score=189.86  Aligned_cols=142  Identities=27%  Similarity=0.464  Sum_probs=104.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......++..|+|||.+.+....+.++|+||||+++|+|++
T Consensus       119 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~  196 (286)
T cd07847         119 HNCIHRDVKPENILITKQG--QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT  196 (286)
T ss_pred             CCceecCCChhhEEEcCCC--cEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987654433 22234578899999998764433445999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc---------------cccCCC----------CCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV---------------HYSIPG----------YVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~~----------~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      |..||.+.................               ....+.          ...++..+.+|+.+||..+|++||+
T Consensus       197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  276 (286)
T cd07847         197 GQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS  276 (286)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC
Confidence            999998765443332222111000               000010          1246788999999999999999999


Q ss_pred             HHHHhcCccc
Q 027327          135 IPEIQKHPWF  144 (225)
Q Consensus       135 ~~eil~hp~~  144 (225)
                      +.+++.||||
T Consensus       277 ~~eil~~~~f  286 (286)
T cd07847         277 CEELLEHPYF  286 (286)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=2.7e-27  Score=193.71  Aligned_cols=147  Identities=29%  Similarity=0.382  Sum_probs=108.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||.|||++.++  .++|+|||++.......    ......++..|+|||++.+....+.++|+||||+++|+
T Consensus       122 ~gi~H~dlkp~nili~~~~--~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~  199 (330)
T cd07834         122 ANVIHRDLKPSNILVNSNC--DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAE  199 (330)
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHH
Confidence            4899999999999998776  79999999998654432    23344678899999999877333445999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccc----------------------c---CCCCCCCCHHHHHHHHhhcccCCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHY----------------------S---IPGYVRVSLECRHLLSRIFVADPEK  131 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~----------------------~---~~~~~~~~~~~~~li~~~l~~dP~~  131 (225)
                      |++|..||........+..+.........                      .   ......++..+.+||.+||+++|.+
T Consensus       200 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  279 (330)
T cd07834         200 LLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKK  279 (330)
T ss_pred             HHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhh
Confidence            99999999876543333222221100000                      0   0011236788999999999999999


Q ss_pred             CCCHHHHhcCcccCcCCC
Q 027327          132 RITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       132 R~s~~eil~hp~~~~~~~  149 (225)
                      |||+.++++||||.+...
T Consensus       280 Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         280 RITADEALAHPYLAQLHD  297 (330)
T ss_pred             CCCHHHHHhCccHHhhcc
Confidence            999999999999986433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.95  E-value=2.8e-27  Score=190.52  Aligned_cols=143  Identities=27%  Similarity=0.354  Sum_probs=105.4

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+||+++. ++  .+||+|||++....... ......+++.|+|||++.+....+.++|+||||+++|+|+
T Consensus       129 ~~i~H~dl~~~nil~~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~  206 (295)
T cd07837         129 HGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS  206 (295)
T ss_pred             CCeeecCCChHHEEEecCCC--eEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHH
Confidence            48999999999999987 44  79999999987543221 2223357888999999865443345599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccc-c------------CC---------CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHY-S------------IP---------GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~-~------------~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      +|..||........+..+...+..... .            .+         ..+.++.++.+||.+||.++|.+||++.
T Consensus       207 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~  286 (295)
T cd07837         207 RKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAK  286 (295)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHH
Confidence            999999876554444433332111000 0            00         0124788999999999999999999999


Q ss_pred             HHhcCcccC
Q 027327          137 EIQKHPWFL  145 (225)
Q Consensus       137 eil~hp~~~  145 (225)
                      +++.||||.
T Consensus       287 eil~~~~~~  295 (295)
T cd07837         287 AALTHPYFD  295 (295)
T ss_pred             HHhcCCCcC
Confidence            999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2e-27  Score=190.91  Aligned_cols=137  Identities=36%  Similarity=0.650  Sum_probs=115.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC-CCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-LHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||+||||.+||+++..+  ++||+|||+++... ...+.++.+|||.|+|||++...+|.- ++|+||+|+++|||+.
T Consensus       469 kgIiYRDLKLDNvmLd~eG--HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgk-svDWWa~GVLLyEmla  545 (683)
T KOG0696|consen  469 KGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGK-SVDWWAFGVLLYEMLA  545 (683)
T ss_pred             CCeeeeeccccceEeccCC--ceEeeecccccccccCCcceeeecCCCcccccceEEeccccc-chhHHHHHHHHHHHHc
Confidence            6999999999999998877  89999999998543 345567789999999999999888864 4999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-----HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-----PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-----~eil~hp~~~~  146 (225)
                      |++||.+....+.+    +.++.....+|.  .+|.++.++.+..|.+.|.+|..+     .+|..||||+.
T Consensus       546 GQpPFdGeDE~elF----~aI~ehnvsyPK--slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  546 GQPPFDGEDEDELF----QAIMEHNVSYPK--SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR  611 (683)
T ss_pred             CCCCCCCCCHHHHH----HHHHHccCcCcc--cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence            99999987664444    444444444454  589999999999999999999965     67999999975

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=4.5e-27  Score=188.33  Aligned_cols=141  Identities=31%  Similarity=0.444  Sum_probs=105.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCcccccc-----CCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLS-----RKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~-----~~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......+++.|+|||++.     +..++ .++|+||+||++
T Consensus       122 ~~i~H~dlkp~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~~Dv~slGvil  198 (282)
T cd06643         122 NKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD-YKADVWSLGITL  198 (282)
T ss_pred             CCeeecCCCcccEEEccCC--CEEEccccccccccccccccccccccccccCHhhccccCCCCCCCC-ccchhhhHHHHH
Confidence            4899999999999998776  79999999986543221 223346889999999984     23343 349999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+|++|+.||..............   ......+....++.++++||.+||..+|.+||++.++++||||...
T Consensus       199 ~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         199 IEMAQIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHccCCCCccccCHHHHHHHHhh---cCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            999999999976543322222211   1111222334578899999999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.95  E-value=2.4e-27  Score=189.83  Aligned_cols=137  Identities=28%  Similarity=0.416  Sum_probs=103.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccC-----CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+||+++.++  .++|+|||++...... .......+++.|+|||.+..     ..++.+ +|+|||||++
T Consensus       140 ~~ivH~dl~~~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~-~DvwslG~~l  216 (282)
T cd06636         140 HKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYR-SDIWSLGITA  216 (282)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcc-cchhHHHHHH
Confidence            4899999999999998776  6999999998754322 22334568899999999852     345444 8999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+|++|..||...........    +............++.++.+||.+||..+|.+||++.++++||||
T Consensus       217 ~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         217 IEMAEGAPPLCDMHPMRALFL----IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHhCCCCccccCHHhhhhh----HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            999999999976543222211    111111112223578899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=4.3e-27  Score=187.25  Aligned_cols=138  Identities=32%  Similarity=0.535  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++||||||+||+++.++. .++|+|||++......   ....++..|+|||++.+..++.+ +|+||+|+++|+|++|
T Consensus       128 ~~i~H~dl~p~nil~~~~~~-~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~il~~l~~g  202 (267)
T PHA03390        128 HNIIHNDIKLENVLYDRAKD-RIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVS-FDWWAVGVLTYELLTG  202 (267)
T ss_pred             CCeeeCCCCHHHEEEeCCCC-eEEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCch-hhHHHHHHHHHHHHHC
Confidence            48999999999999986652 5999999998754322   23457889999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhH-HHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-~~eil~hp~~~~  146 (225)
                      ..||........ ........ .  ...+....++..+.+||.+||+.+|.+|++ ++++++||||.+
T Consensus       203 ~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        203 KHPFKEDEDEELDLESLLKRQ-Q--KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             CCCCCCCCcchhhHHHHHHhh-c--ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence            999975433221 11222211 1  222333358999999999999999999996 699999999963

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.95  E-value=3.4e-27  Score=194.32  Aligned_cols=146  Identities=27%  Similarity=0.378  Sum_probs=107.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+||+++.++  .+||+|||++......  .....++..|+|||.+.+....+.++|+|||||++|+|++|
T Consensus       137 ~gi~H~dlkp~Nill~~~~--~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg  212 (343)
T cd07851         137 AGIIHRDLKPSNIAVNEDC--ELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  212 (343)
T ss_pred             CCeecCCCCHHHeEECCCC--CEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhC
Confidence            4899999999999998766  6999999998765332  33446788999999986543334459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc-------------------cccC------CCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV-------------------HYSI------PGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~------~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||........+..+.......                   ....      ..+..++..+.+||.+||..+|.+|||+
T Consensus       213 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~  292 (343)
T cd07851         213 KTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITA  292 (343)
T ss_pred             CCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCH
Confidence            99997655433332222111000                   0000      0112368899999999999999999999


Q ss_pred             HHHhcCcccCcCCCc
Q 027327          136 PEIQKHPWFLKNLPI  150 (225)
Q Consensus       136 ~eil~hp~~~~~~~~  150 (225)
                      .+|++||||.+....
T Consensus       293 ~ell~h~~~~~~~~~  307 (343)
T cd07851         293 AEALAHPYLAEYHDP  307 (343)
T ss_pred             HHHhcCCCccccCCC
Confidence            999999999876444

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=2.3e-27  Score=189.98  Aligned_cols=140  Identities=31%  Similarity=0.465  Sum_probs=105.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC-CccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR-KEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||++...... ......|++.|+|||.+.. ..++ .++|+||+||++|+|++
T Consensus       116 ~~ivH~dikp~Nil~~~~~--~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~-~~~Di~slG~~l~~l~~  191 (279)
T cd05633         116 RFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGTAYD-SSADWFSLGCMLFKLLR  191 (279)
T ss_pred             CCcCCCCCCHHHEEECCCC--CEEEccCCcceecccc-CccCcCCCcCccCHHHhcCCCCCC-chhhhHHHHHHHHHHHh
Confidence            4799999999999998776  7999999998654322 2233468999999999864 3444 44999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |..||........ .............  ....++.+++++|++||..||.+|+     ++.++++||||...
T Consensus       192 g~~pf~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         192 GHSPFRQHKTKDK-HEIDRMTLTVNVE--LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             CCCCcCCCCCcCH-HHHHHHhhcCCcC--CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence            9999975433221 1111111111222  2235789999999999999999999     69999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.95  E-value=1.6e-27  Score=188.91  Aligned_cols=143  Identities=29%  Similarity=0.534  Sum_probs=107.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++||||||+||+++.++  .++|+|||.+........ ....++..|+|||.+.+..++.+ +|+||||+++|+|++|
T Consensus       120 ~~i~H~dl~~~ni~~~~~~--~~~l~d~g~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~-~Dv~slG~~l~~l~~g  195 (265)
T cd06605         120 HKIIHRDVKPSNILVNSRG--QIKLCDFGVSGQLVNSLA-KTFVGTSSYMAPERIQGNDYSVK-SDIWSLGLSLIELATG  195 (265)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEeecccchhhHHHHh-hcccCChhccCHHHHcCCCCCch-hhHHHHHHHHHHHHhC
Confidence            4899999999999998766  799999999865432222 22568889999999988777655 9999999999999999


Q ss_pred             CCCCCCCC-ChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPE-DPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.... .........+.+............++.++++||.+||..+|.+|||+.+++.||||++.
T Consensus       196 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         196 RFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             CCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            99996542 11222233333333221111111278899999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.95  E-value=9.8e-28  Score=196.72  Aligned_cols=139  Identities=29%  Similarity=0.600  Sum_probs=103.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccC-----CccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~i   73 (225)
                      +||+||||||+|||++.++  .+||+|||++........  ....+||+.|+|||++..     ..+. .++|||||||+
T Consensus       121 ~~iiHrDlkp~Nili~~~~--~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~DvwSlGvi  197 (332)
T cd05623         121 LHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYG-PECDWWSLGVC  197 (332)
T ss_pred             CCeEecCCCHHHEEECCCC--CEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCC-CcCCEEeeHHH
Confidence            5899999999999998766  799999999875432222  123469999999999862     2344 45999999999


Q ss_pred             HHHHHhCCCCCCCCCChhHHHHHHHHHhccc--ccCCC-CCCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCc
Q 027327           74 LYVMLVGAYPFEDPEDPRNFKTTIQRILSVH--YSIPG-YVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLK  146 (225)
Q Consensus        74 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~  146 (225)
                      +|+|++|+.||........+.    ++....  ...+. ...++.++++||++||..++.+  |+++.++++||||..
T Consensus       198 l~ell~g~~Pf~~~~~~~~~~----~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         198 MYEMLYGETPFYAESLVETYG----KIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             HHHHhcCCCCCCCCCHHHHHH----HHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            999999999998755433332    332222  12222 2357899999999999765544  689999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.95  E-value=9.2e-28  Score=186.52  Aligned_cols=145  Identities=29%  Similarity=0.418  Sum_probs=105.5

Q ss_pred             eEecCCCCCcEEEcCC--CCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            3 ICHRDLKLENTLLDGS--KAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~--~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      |+||||||.|||+..+  ..+.|||+|||+++.+...-..    ...+.|.+|+|||++.+...++++.|+||+|||+.|
T Consensus       153 vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE  232 (438)
T KOG0666|consen  153 VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE  232 (438)
T ss_pred             eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence            7899999999999655  2347999999999976544322    234689999999999998877888999999999999


Q ss_pred             HHhCCCCCCCCCCh---------hHHHHHHHHHhc-ccccC------CCC------------------------CCCCHH
Q 027327           77 MLVGAYPFEDPEDP---------RNFKTTIQRILS-VHYSI------PGY------------------------VRVSLE  116 (225)
Q Consensus        77 ll~g~~pf~~~~~~---------~~~~~~~~~~~~-~~~~~------~~~------------------------~~~~~~  116 (225)
                      |++..+.|.+....         .++..++.-+.. ....+      |.+                        ..-++.
T Consensus       233 lLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~  312 (438)
T KOG0666|consen  233 LLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPS  312 (438)
T ss_pred             HHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCch
Confidence            99998888664311         122222211100 00011      110                        012334


Q ss_pred             HHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       117 ~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..+|+.+||.+||.+|+|++++|+|+||...
T Consensus       313 a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  313 ALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             HHHHHHHHhccCchhhccHHHHhcccccccC
Confidence            7799999999999999999999999999875

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.6e-27  Score=188.86  Aligned_cols=143  Identities=31%  Similarity=0.425  Sum_probs=109.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++||||+|+||+++.++  .++|+|||+++..... .......+++.|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       117 ~~i~h~dl~p~ni~i~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-sDv~slG~il~~l~t  193 (274)
T cd06609         117 EGKIHRDIKAANILLSEEG--DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEK-ADIWSLGITAIELAK  193 (274)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEcccccceeecccccccccccCCccccChhhhccCCCCch-hhHHHHHHHHHHHHh
Confidence            4799999999999998776  7999999998765443 22334568889999999987776655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      |..||........    ...+............++..+.+++.+||..+|.+|||++++++||||.+....
T Consensus       194 g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  260 (274)
T cd06609         194 GEPPLSDLHPMRV----LFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT  260 (274)
T ss_pred             CCCCcccCchHHH----HHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence            9999976543221    122222211111111278899999999999999999999999999999876444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=7.5e-27  Score=187.30  Aligned_cols=143  Identities=27%  Similarity=0.492  Sum_probs=106.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCcc-----CCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY-----DGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~-----~~~~~DiwslG~il~   75 (225)
                      .||+||||||+||+++.++  .+||+|||++...... ......+++.|+|||.+.+...     .+.++|+|||||++|
T Consensus       122 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~  198 (286)
T cd06622         122 HNIIHRDVKPTNVLVNGNG--QVKLCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL  198 (286)
T ss_pred             CCEeeCCCCHHHEEECCCC--CEEEeecCCcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHH
Confidence            3799999999999998765  7999999998754322 2334568889999999854432     134589999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      +|++|..||....... .......+..... ......++.++.+||.+||..+|.+||++.+++.||||....
T Consensus       199 ~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         199 EMALGRYPYPPETYAN-IFAQLSAIVDGDP-PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             HHHhCCCCCCCcchhh-HHHHHHHHhhcCC-CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            9999999997644322 2222233322221 112234789999999999999999999999999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA02988 hypothetical protein; Provisional

Probab=99.94  E-value=3e-27  Score=189.78  Aligned_cols=131  Identities=25%  Similarity=0.308  Sum_probs=101.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC--CccCCCcccHHHHHHHHHHHHh
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR--KEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~--~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +++||||||+|||++.++  .+||+|||+++.....  .....+++.|+|||++.+  ..++.+ +|||||||++|+|++
T Consensus       143 ~~~Hrdlkp~nill~~~~--~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~k-~Di~SlGvil~el~~  217 (283)
T PHA02988        143 NKPYKNLTSVSFLVTENY--KLKIICHGLEKILSSP--PFKNVNFMVYFSYKMLNDIFSEYTIK-DDIYSLGVVLWEIFT  217 (283)
T ss_pred             CCCCCcCChhhEEECCCC--cEEEcccchHhhhccc--cccccCcccccCHHHhhhccccccch-hhhhHHHHHHHHHHH
Confidence            688999999999998776  7999999998754322  234568899999999975  456544 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |..||........    ...+.......+.....+..+++|+.+||+.||.+|||+.++++.
T Consensus       218 g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~  275 (283)
T PHA02988        218 GKIPFENLTTKEI----YDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN  275 (283)
T ss_pred             CCCCCCCCCHHHH----HHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            9999987554332    222322222223333578999999999999999999999999863

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.94  E-value=3.7e-27  Score=188.64  Aligned_cols=140  Identities=29%  Similarity=0.531  Sum_probs=105.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC----CccCCCcccHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR----KEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~----~~~~~~~~DiwslG~il~~l   77 (225)
                      +++||||||+||+++.++  .+||+|||++.............++..|+|||.+.+    ..++ .++|+|||||++|+|
T Consensus       124 ~i~h~dlkp~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~-~~~Di~slG~~l~~l  200 (283)
T cd06617         124 SVIHRDVKPSNVLINRNG--QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYD-VKSDVWSLGITMIEL  200 (283)
T ss_pred             CeecCCCCHHHEEECCCC--CEEEeecccccccccccccccccCCccccChhhcCCcccccccC-ccccchhhHHHHHHH
Confidence            799999999999998776  799999999876543333333568889999998864    2334 348999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++|+.||.......  ..............+ ...++.++.+||.+||..+|.+||++.++++||||.+.
T Consensus       201 ~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         201 ATGRFPYDSWKTPF--QQLKQVVEEPSPQLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             HhCCCCCCccccCH--HHHHHHHhcCCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence            99999996533221  111111111112222 12478899999999999999999999999999999865

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=2.2e-27  Score=212.63  Aligned_cols=140  Identities=28%  Similarity=0.437  Sum_probs=106.4

Q ss_pred             ceEecCCCCCcEEEcCC---------------CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC--ccCCCc
Q 027327            2 QICHRDLKLENTLLDGS---------------KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK--EYDGKI   64 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~---------------~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~--~~~~~~   64 (225)
                      +||||||||+||||...               +...+||+|||++.............||+.|+|||++.+.  .++ .+
T Consensus       145 ~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s-~K  223 (1021)
T PTZ00266        145 RVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYD-DK  223 (1021)
T ss_pred             CceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCC-ch
Confidence            59999999999999642               2235899999999865444444556799999999998643  344 44


Q ss_pred             ccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           65 ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        65 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +|||||||++|+|++|..||........+.   ..+.. ....+ ....+.++.+||.+||..+|.+||++.++|.|+|+
T Consensus       224 SDVWSLG~ILYELLTGk~PF~~~~~~~qli---~~lk~-~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i  298 (1021)
T PTZ00266        224 SDMWALGCIIYELCSGKTPFHKANNFSQLI---SELKR-GPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGYQII  298 (1021)
T ss_pred             hHHHHHHHHHHHHHHCCCCCCcCCcHHHHH---HHHhc-CCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence            999999999999999999997654433222   22222 11222 23468899999999999999999999999999999


Q ss_pred             CcC
Q 027327          145 LKN  147 (225)
Q Consensus       145 ~~~  147 (225)
                      ...
T Consensus       299 k~i  301 (1021)
T PTZ00266        299 KNV  301 (1021)
T ss_pred             hhc
Confidence            754

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=2.1e-27  Score=206.26  Aligned_cols=146  Identities=21%  Similarity=0.273  Sum_probs=96.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC--CCCCCcccCCCCCccccccCCccC-----------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH--SQPKSTVGTPAYIAPEVLSRKEYD-----------------   61 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~--~~~~~~~g~~~y~aPE~l~~~~~~-----------------   61 (225)
                      .|||||||||+|||++... +.+||+|||+|+.....  ......++++.|+|||.+......                 
T Consensus       274 ~gIiHRDLKP~NILl~~~~-~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~  352 (566)
T PLN03225        274 TGIVHRDVKPQNIIFSEGS-GSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLW  352 (566)
T ss_pred             CCEEeCcCCHHHEEEeCCC-CcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhc
Confidence            4899999999999997532 26999999999754322  223456789999999976432211                 


Q ss_pred             ----CCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHH----------Hhccccc------CCCCCCCCHHHHHHH
Q 027327           62 ----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQR----------ILSVHYS------IPGYVRVSLECRHLL  121 (225)
Q Consensus        62 ----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~----------~~~~~~~------~~~~~~~~~~~~~li  121 (225)
                          ..++|||||||++|+|+++..++..  ....+...+..          .......      ............+||
T Consensus       353 ~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi  430 (566)
T PLN03225        353 QLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELL  430 (566)
T ss_pred             cccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHH
Confidence                1235999999999999987766532  11111111111          0000000      000001223456899


Q ss_pred             HhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327          122 SRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       122 ~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      .+||++||.+|||+.++|+||||.+...
T Consensus       431 ~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        431 KSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             HHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            9999999999999999999999987544

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=3.1e-27  Score=189.28  Aligned_cols=143  Identities=29%  Similarity=0.423  Sum_probs=106.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+|+||||+||+++.++  .++|+|||++.......  ......++..|+|||.+.+....+.++||||+|+++|+|+
T Consensus       118 ~~i~H~dl~p~ni~~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~  195 (286)
T cd07832         118 NGIMHRDLKPANLLISADG--VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELL  195 (286)
T ss_pred             CCeecCCcCHHHEEEcCCC--cEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHH
Confidence            4899999999999998766  79999999987654332  1234568899999999876554445599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccc---------------cCC---------CCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHY---------------SIP---------GYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------~~~---------~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      +|.+||........+............               ..+         .....+..+.+||.+||..+|.+|||
T Consensus       196 tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~  275 (286)
T cd07832         196 NGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS  275 (286)
T ss_pred             cCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC
Confidence            998888765544433333222111000               000         11245688999999999999999999


Q ss_pred             HHHHhcCcccC
Q 027327          135 IPEIQKHPWFL  145 (225)
Q Consensus       135 ~~eil~hp~~~  145 (225)
                      ++++++||||.
T Consensus       276 ~~~~l~h~~~~  286 (286)
T cd07832         276 AAEALRHPYFT  286 (286)
T ss_pred             HHHHhhCcCcC
Confidence            99999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.94  E-value=4.5e-27  Score=189.87  Aligned_cols=142  Identities=30%  Similarity=0.481  Sum_probs=109.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++||||||+||+++.++  .+||+|||++........ .....++..|+|||.+.+..++.+ +|+|||||++|+|++
T Consensus       134 ~~i~H~dL~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slGvil~~llt  210 (296)
T cd06655         134 NQVIHRDIKSDNVLLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMVE  210 (296)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998766  799999999875433322 223468889999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |+.||.............   ............++..+.+||++||..+|.+||++.+++.||||....
T Consensus       211 g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         211 GEPPYLNENPLRALYLIA---TNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             CCCCCCCCCHHHHHHHHH---hcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence            999997755433222111   111222223345788999999999999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.3e-28  Score=193.10  Aligned_cols=143  Identities=32%  Similarity=0.514  Sum_probs=107.1

Q ss_pred             CceEecCCCCCcEEEcCC------------------CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCC
Q 027327            1 MQICHRDLKLENTLLDGS------------------KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG   62 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~------------------~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~   62 (225)
                      ++++|.||||+|||+.++                  ....|||+|||.|.......  .+.+.|..|+|||++.+-+++.
T Consensus       211 ~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~  288 (415)
T KOG0671|consen  211 LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQ  288 (415)
T ss_pred             cceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcCC
Confidence            479999999999998321                  12358999999987543332  4567899999999999999987


Q ss_pred             CcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc------------------cCCCC--------------
Q 027327           63 KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY------------------SIPGY--------------  110 (225)
Q Consensus        63 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------~~~~~--------------  110 (225)
                      + +||||+|||++|+.+|...|+...+.+.+ ..+++++.+.+                  .++..              
T Consensus       289 p-CDvWSiGCIL~ElytG~~LFqtHen~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ck  366 (415)
T KOG0671|consen  289 P-CDVWSIGCILVELYTGETLFQTHENLEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCK  366 (415)
T ss_pred             c-cCceeeeeEEEEeeccceecccCCcHHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCc
Confidence            7 99999999999999999999887755543 34444432110                  00000              


Q ss_pred             ------CCC---CHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          111 ------VRV---SLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       111 ------~~~---~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                            ...   -.++.+||++||.+||.+|+|+.|+|.||||..-
T Consensus       367 pl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  367 PLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             cHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence                  000   1246799999999999999999999999999754

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=2.5e-27  Score=195.02  Aligned_cols=146  Identities=27%  Similarity=0.374  Sum_probs=106.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.++  .+||+|||+++....  ......+++.|+|||.+.+....+.++|+|||||++|+|++|
T Consensus       136 ~~i~H~dlkp~NIll~~~~--~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g  211 (342)
T cd07879         136 AGIIHRDLKPGNLAVNEDC--ELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG  211 (342)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999875422  223346788999999987643334459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHH-------------------hcccccCC------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRI-------------------LSVHYSIP------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~-------------------~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||........+.......                   .......+      ..+..+..+.+||.+||+.||.+||++
T Consensus       212 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~  291 (342)
T cd07879         212 KTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTA  291 (342)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCH
Confidence            99998654333222221100                   00000000      012467889999999999999999999


Q ss_pred             HHHhcCcccCcCCCc
Q 027327          136 PEIQKHPWFLKNLPI  150 (225)
Q Consensus       136 ~eil~hp~~~~~~~~  150 (225)
                      .+++.||||......
T Consensus       292 ~e~l~h~~f~~~~~~  306 (342)
T cd07879         292 TEALEHPYFDSFRDA  306 (342)
T ss_pred             HHHhcCcchhhcccc
Confidence            999999999876443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=2.5e-27  Score=189.40  Aligned_cols=141  Identities=34%  Similarity=0.521  Sum_probs=109.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|++||||+|+||+++.++  .+||+|||++.............++..|+|||.+.+..++.+ +|+||||+++|+|++|
T Consensus       114 ~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~il~~l~~g  190 (277)
T cd05577         114 RRIVYRDLKPENVLLDDHG--NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFS-VDWFALGCTLYEMIAG  190 (277)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCch-hhhHHHHHHHHHHhhC
Confidence            4899999999999998776  799999999876544333344567889999999987776545 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~  146 (225)
                      +.||......................  ....+++.+.+||.+||..+|.+||     ++.+++.||||.+
T Consensus       191 ~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         191 RSPFRQRKEKVEKEELKRRTLEMAVE--YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             CCCCCCCcccccHHHHHhcccccccc--CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence            99997655422222222222222222  2234789999999999999999999     8888999999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.94  E-value=4.1e-27  Score=190.05  Aligned_cols=141  Identities=30%  Similarity=0.468  Sum_probs=108.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .+||+|||++........ .....+++.|+|||.+.+..++.+ +|+|||||++|+|++
T Consensus       135 ~gi~H~dLkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~s~Gvil~~l~~  211 (296)
T cd06654         135 NQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMIE  211 (296)
T ss_pred             CCcccCCCCHHHEEEcCCC--CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCcc-chHHHHHHHHHHHHh
Confidence            4899999999999998766  799999999875433222 223468889999999987766555 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+.||...........   .........+....++..+.+|+.+||..+|.+|||+.++++||||...
T Consensus       212 g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         212 GEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             CCCCCCCCCHHHhHHH---HhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence            9999976544222211   1111222222334578899999999999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.94  E-value=5.8e-27  Score=189.04  Aligned_cols=140  Identities=31%  Similarity=0.530  Sum_probs=106.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCc----cCCCcccHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE----YDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~----~~~~~~DiwslG~il~~l   77 (225)
                      ||+||||+|+||+++.++  .+||+|||++.............++..|+|||.+.+..    ++. ++|+||||+++|+|
T Consensus       135 ~i~H~dl~p~nill~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~Di~slG~il~el  211 (296)
T cd06618         135 GVIHRDVKPSNILLDASG--NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDI-RADVWSLGISLVEL  211 (296)
T ss_pred             CEecCCCcHHHEEEcCCC--CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCcccccc-chhHHHHHHHHHHH
Confidence            799999999999998766  79999999987654333333445788999999986543    444 48999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcc-cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++|+.||......   ......+... ....+....++.++++|+.+||..+|.+||++.++++|+||...
T Consensus       212 ~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         212 ATGQFPYKNCKTE---FEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             HhCCCCCCcchhH---HHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence            9999999653221   1222222222 22223223478899999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=3.6e-27  Score=185.93  Aligned_cols=138  Identities=30%  Similarity=0.474  Sum_probs=105.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||+|.||+++.++  .+||+|||++....... ......++..|+|||++.+..++.+ +|+||||+++|+|++
T Consensus       118 ~~i~H~dl~~~ni~~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~s~G~il~~l~~  194 (256)
T cd06612         118 NKKIHRDIKAGNILLNEEG--QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNK-ADIWSLGITAIEMAE  194 (256)
T ss_pred             CCcccCCCCcceEEECCCC--cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCch-hhHHHHHHHHHHHHh
Confidence            4799999999999998776  79999999987654433 2233457889999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+.||............   .............++..+.+|+.+||..+|.+|||+.++++||||
T Consensus       195 g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         195 GKPPYSDIHPMRAIFMI---PNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             CCCCCCCcchhhhhhhh---ccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            99999764432211111   001111112223467899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=6.8e-27  Score=192.04  Aligned_cols=133  Identities=26%  Similarity=0.430  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       193 ~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDiwslG~il~el  269 (338)
T cd05102         193 RKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQ-SDVWSFGVLLWEI  269 (338)
T ss_pred             CCEECCCCccceEEEcCCC--cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcc-cCHHHHHHHHHHH
Confidence            4899999999999998766  799999999975432211   112345678999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||........+...   +... ........+++.+.+|+.+||..+|.+|||+.++++
T Consensus       270 ~~~g~~pf~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         270 FSLGASPYPGVQINEEFCQR---LKDG-TRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HhCCCCCCCCCCccHHHHHH---HhcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            97 99999875543322222   1111 112223457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=7.4e-27  Score=191.86  Aligned_cols=145  Identities=29%  Similarity=0.377  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|++||||||+||+++.++  .+||+|||+++..... .......++..|+|||.+......+.++|+|||||++|+|++
T Consensus       127 ~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  204 (337)
T cd07858         127 ANVLHRDLKPSNLLLNANC--DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLG  204 (337)
T ss_pred             CCEecCCCCHHHEEEcCCC--CEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHc
Confidence            4899999999999998766  7999999998765433 222334678899999988653333445999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHH-------------------Hhccccc------CCCCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQR-------------------ILSVHYS------IPGYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      |+.||.+.............                   .......      ......++.++++||++||+.+|++|||
T Consensus       205 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps  284 (337)
T cd07858         205 RKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT  284 (337)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC
Confidence            99999765322111111100                   0000000      0012357889999999999999999999


Q ss_pred             HHHHhcCcccCcC
Q 027327          135 IPEIQKHPWFLKN  147 (225)
Q Consensus       135 ~~eil~hp~~~~~  147 (225)
                      +.++++||||...
T Consensus       285 ~~ell~h~~~~~~  297 (337)
T cd07858         285 VEEALAHPYLASL  297 (337)
T ss_pred             HHHHHcCcchhhh
Confidence            9999999999754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.6e-27  Score=193.34  Aligned_cols=142  Identities=31%  Similarity=0.579  Sum_probs=102.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccC----CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSR----KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~----~~~~~~~~DiwslG~il   74 (225)
                      +||+||||||+|||++.++  .+||+|||++.........  ....||+.|+|||++..    ....+.++|||||||++
T Consensus       121 ~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l  198 (331)
T cd05597         121 LGYVHRDIKPDNVLLDKNG--HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCM  198 (331)
T ss_pred             CCeEECCCCHHHEEECCCC--CEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHH
Confidence            5899999999999998766  7999999998654332222  22468999999999863    22233458999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCC-CCCCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP-GYVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLK  146 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~  146 (225)
                      |+|++|+.||........+..+...  ......+ ....++..+++||++||...+++  |+++.++++||||..
T Consensus       199 ~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         199 YEMLYGETPFYAESLVETYGKIMNH--KEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHcC--CCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence            9999999999765443333222211  1111122 22347899999999999764443  789999999999965

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=6.6e-27  Score=185.69  Aligned_cols=136  Identities=36%  Similarity=0.491  Sum_probs=104.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-------CCCcccCCCCCccccccCCccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-------PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-------~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~i   73 (225)
                      .|++||||+|+||+++.++  .+||+|||+++.......       .....++..|+|||.+.+..++.+ +|+|||||+
T Consensus       125 ~~ivH~di~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~i  201 (267)
T cd06628         125 RGIIHRDIKGANILVDNKG--GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRK-ADIWSLGCL  201 (267)
T ss_pred             cCcccccCCHHHEEEcCCC--CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCch-hhhHHHHHH
Confidence            4899999999999998766  799999999875542111       112347889999999987777655 899999999


Q ss_pred             HHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           74 LYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        74 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +|+|++|..||..........    .+.... .......++..+.++|++||+.+|.+||++.++++||||
T Consensus       202 l~~l~~g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         202 VVEMLTGKHPFPDCTQLQAIF----KIGENA-SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHhhCCCCCCCccHHHHHH----HHhccC-CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            999999999998654322221    221211 111223578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=7.7e-27  Score=187.95  Aligned_cols=142  Identities=30%  Similarity=0.409  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++...... .......+++.|+|||.+.+....+.++|+||||+++|+|++
T Consensus       125 ~~i~H~dl~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~  202 (293)
T cd07843         125 NWILHRDLKTSNLLLNNRG--ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT  202 (293)
T ss_pred             CCeeeccCCHHHEEECCCC--cEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHh
Confidence            4899999999999998776  7999999998765443 222334678899999998765543455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc-----------------cc-------cCCCCCC--CCHHHHHHHHhhcccCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV-----------------HY-------SIPGYVR--VSLECRHLLSRIFVADPEKRI  133 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~-----------------~~-------~~~~~~~--~~~~~~~li~~~l~~dP~~R~  133 (225)
                      |..||...................                 ..       .......  ++..+.+||++||+.+|++||
T Consensus       203 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  282 (293)
T cd07843         203 KKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRI  282 (293)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccC
Confidence            999998765544333332211000                 00       0001111  478899999999999999999


Q ss_pred             CHHHHhcCccc
Q 027327          134 TIPEIQKHPWF  144 (225)
Q Consensus       134 s~~eil~hp~~  144 (225)
                      |+.+++.||||
T Consensus       283 t~~ell~~~~f  293 (293)
T cd07843         283 SAEDALKHPYF  293 (293)
T ss_pred             CHHHHhcCCCC
Confidence            99999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=8.6e-27  Score=189.63  Aligned_cols=139  Identities=40%  Similarity=0.652  Sum_probs=108.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------------------------------CCCCcccCCCCC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------------------------------QPKSTVGTPAYI   50 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------------------------------~~~~~~g~~~y~   50 (225)
                      .|++||||||+||+++.++  .++|+|||++.......                              .....+|+..|+
T Consensus       122 ~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~  199 (316)
T cd05574         122 LGIVYRDLKPENILLHESG--HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYI  199 (316)
T ss_pred             CCeeccCCChHHeEEcCCC--CEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCc
Confidence            4899999999999998776  79999999976432111                              011235788999


Q ss_pred             ccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCC
Q 027327           51 APEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPE  130 (225)
Q Consensus        51 aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  130 (225)
                      |||++.+..++.+ +||||||+++|+|++|..||........+.    .+.......+....++..++++|.+||..+|+
T Consensus       200 aPE~~~~~~~~~~-~Di~slG~ll~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  274 (316)
T cd05574         200 APEVISGDGHGSA-VDWWTLGILLYEMLYGTTPFKGSNRDETFS----NILKKEVTFPGSPPVSSSARDLIRKLLVKDPS  274 (316)
T ss_pred             CHHHHcCCCCCch-HHHHHHHHHHHHHhhCCCCCCCCchHHHHH----HHhcCCccCCCccccCHHHHHHHHHHccCCHh
Confidence            9999987776544 999999999999999999998765443332    23333334444444789999999999999999


Q ss_pred             CCCC----HHHHhcCcccCc
Q 027327          131 KRIT----IPEIQKHPWFLK  146 (225)
Q Consensus       131 ~R~s----~~eil~hp~~~~  146 (225)
                      +|||    +.++++||||.+
T Consensus       275 ~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         275 KRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             HCCCchhhHHHHHcCchhhc
Confidence            9999    999999999976

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=4.2e-27  Score=183.48  Aligned_cols=150  Identities=33%  Similarity=0.607  Sum_probs=116.8

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCcccccc----CCccCCCcccH
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLS----RKEYDGKIADV   67 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~----~~~~~~~~~Di   67 (225)
                      +||.||||||+|||-... .-.-|||+||.+.........        ..+.+|+..|||||++.    ...++.+.+|.
T Consensus       195 kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDl  274 (463)
T KOG0607|consen  195 KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDL  274 (463)
T ss_pred             cCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccH
Confidence            699999999999998543 223589999998764332221        23457888999999863    33455677999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCC-----------hhHHHHHHHHHhcccccCCC--CCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           68 WSCGVTLYVMLVGAYPFEDPED-----------PRNFKTTIQRILSVHYSIPG--YVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        68 wslG~il~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      ||||+|+|.||.|.+||.+.-.           ..-....+..|....+.+|.  +..+|.++++|++.+|..++.+|.+
T Consensus       275 wSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rls  354 (463)
T KOG0607|consen  275 WSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLS  354 (463)
T ss_pred             HHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhh
Confidence            9999999999999999976422           12345566777777777764  5679999999999999999999999


Q ss_pred             HHHHhcCcccCcCCCc
Q 027327          135 IPEIQKHPWFLKNLPI  150 (225)
Q Consensus       135 ~~eil~hp~~~~~~~~  150 (225)
                      +.++++|||+....+.
T Consensus       355 a~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  355 AAQVLNHPWVQRCAPE  370 (463)
T ss_pred             hhhccCCccccccchh
Confidence            9999999999875444

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=5.9e-27  Score=188.82  Aligned_cols=143  Identities=31%  Similarity=0.548  Sum_probs=108.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .+||+|||++....... ......++..|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       137 ~~ivH~dlkp~Nill~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slGvil~el~~  213 (292)
T cd06658         137 QGVIHRDIKSDSILLTSDG--RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTE-VDIWSLGIMVIEMID  213 (292)
T ss_pred             CCEeecCCCHHHEEEcCCC--CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999986543222 2233468899999999977777654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |..||........... .....  ....+....++..+.+|+.+||..+|.+|||+.++++||||....+
T Consensus       214 g~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~  280 (292)
T cd06658         214 GEPPYFNEPPLQAMRR-IRDNL--PPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGP  280 (292)
T ss_pred             CCCCCCCCCHHHHHHH-HHhcC--CCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCC
Confidence            9999976544322221 11111  1222223357889999999999999999999999999999985433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=7.8e-27  Score=184.86  Aligned_cols=141  Identities=33%  Similarity=0.562  Sum_probs=109.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++|+||||+||+++.++  .++|+|||++.............+++.|+|||.+.+..++.+ +|+||+|+++|+|++|
T Consensus       112 ~~~~h~dl~~~nilv~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Di~slG~il~~l~~g  188 (262)
T cd05572         112 RGIIYRDLKPENLLLDSNG--YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFS-VDYWSLGILLYELLTG  188 (262)
T ss_pred             CCcccCCCCHHHEEEcCCC--CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCCh-hhhhhhHHHHHHHHhC
Confidence            4799999999999998766  799999999886654433344568899999999877777655 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      ..||......  .......+.............+.+++++|.+||..+|.+||+     +.++++||||..
T Consensus       189 ~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         189 RPPFGEDDED--PMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             CCCcCCCCCC--HHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence            9999765521  122333333212222222345889999999999999999999     999999999975

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.94  E-value=7.7e-27  Score=188.31  Aligned_cols=134  Identities=19%  Similarity=0.210  Sum_probs=101.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--------CCCCcccCCCCCccccccCCccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~   72 (225)
                      +||+||||||+|||++.++  .+||+|||+|+......        ......||+.|+|||++.+..++.+ +|||||||
T Consensus       145 ~~iiHrDiKp~Nill~~~~--~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~-~DiwSlG~  221 (294)
T PHA02882        145 HGISHGDIKPENIMVDGNN--RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRR-GDLESLGY  221 (294)
T ss_pred             CCeecCCCCHHHEEEcCCC--cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcH-HHHHHHHH
Confidence            4899999999999998665  69999999987543211        1123469999999999988877655 99999999


Q ss_pred             HHHHHHhCCCCCCCCCChhHHHH-----HHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           73 TLYVMLVGAYPFEDPEDPRNFKT-----TIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        73 il~~ll~g~~pf~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++|+|++|..||...........     ...++......   ....+..+.+++..||..+|.+||++.++++
T Consensus       222 ~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        222 CMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999987643322221     11222222222   2346789999999999999999999999875

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.1e-28  Score=216.93  Aligned_cols=138  Identities=32%  Similarity=0.503  Sum_probs=110.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----CCCCcccCCCCCccccccCCc--cCCCcccHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----QPKSTVGTPAYIAPEVLSRKE--YDGKIADVWSCGVTL   74 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~l~~~~--~~~~~~DiwslG~il   74 (225)
                      |||||||||+||+++.++  .+|++|||.|.....+.     .....+||+.|||||++.+..  ....+.|||||||++
T Consensus      1354 gIVHRDIK~aNI~Ld~~g--~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVV 1431 (1509)
T KOG4645|consen 1354 GIVHRDIKPANILLDFNG--LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVV 1431 (1509)
T ss_pred             CceecCCCccceeeecCC--cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceE
Confidence            899999999999999888  79999999998654442     123457999999999997654  334468999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhccc-ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVH-YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      .||++|+.||......   ..++.++...+ +..|.  +++.+.++||.+||..||++|+++.|+++|.|-+.
T Consensus      1432 lEM~tGkrPW~~~dne---~aIMy~V~~gh~Pq~P~--~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1432 LEMATGKRPWAELDNE---WAIMYHVAAGHKPQIPE--RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             EEeecCCCchhhccch---hHHHhHHhccCCCCCch--hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            9999999999765443   34444444433 23333  49999999999999999999999999999997654

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=1.2e-26  Score=186.72  Aligned_cols=140  Identities=26%  Similarity=0.380  Sum_probs=103.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCcc----CCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEY----DGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~----~~~~~DiwslG~il~   75 (225)
                      .||+||||||+||+++.++  .+||+|||++........ .....++..|+|||++.....    .+.++|+|||||++|
T Consensus       147 ~~ivH~dlkp~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~  224 (291)
T cd06639         147 NRIIHRDVKGNNILLTTEG--GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAI  224 (291)
T ss_pred             CCeeccCCCHHHEEEcCCC--CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHH
Confidence            4899999999999998766  699999999875443222 223468889999999854321    234599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      +|++|+.||.............   ............++..+.+||.+||..+|.+||++.++++||||+
T Consensus       225 el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         225 ELGDGDPPLFDMHPVKTLFKIP---RNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHhhCCCCCCCCcHHHHHHHHh---cCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            9999999997654332222211   111112222234677899999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=1.3e-26  Score=186.04  Aligned_cols=142  Identities=34%  Similarity=0.588  Sum_probs=108.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||+|+||+++.++  .++|+|||++....... ......|++.|+|||.+.+..++.+ +|+||+|+++|+|++
T Consensus       134 ~~i~H~dl~p~Nil~~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slGv~l~ell~  210 (285)
T cd06648         134 QGVIHRDIKSDSILLTSDG--RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTE-VDIWSLGIMVIEMVD  210 (285)
T ss_pred             CCeecCCCChhhEEEcCCC--cEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCc-ccHHHHHHHHHHHHh
Confidence            4899999999999998766  79999999876443222 2223468899999999987777655 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc-ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH-YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+.||........    ...+.... ........++..+.+|+.+||..+|.+|||+.++++||||.+..+
T Consensus       211 g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         211 GEPPYFNEPPLQA----MKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             CCCCCcCCCHHHH----HHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence            9999976443222    22222221 111222237889999999999999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.94  E-value=1.9e-26  Score=189.34  Aligned_cols=145  Identities=31%  Similarity=0.400  Sum_probs=106.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------CCCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      +||+||||||+||+++.++  .+||+|||++.......      ......++..|+|||.+.+....+.++|+||||+++
T Consensus       126 ~~i~H~dl~p~nill~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l  203 (337)
T cd07852         126 GNVIHRDLKPSNILLNSDC--RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCIL  203 (337)
T ss_pred             CCeecCCCCHHHEEEcCCC--cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHH
Confidence            4899999999999998776  79999999987543322      112346888999999886654444559999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHH-------------------hc----ccc--cCCCCCCCCHHHHHHHHhhcccCC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRI-------------------LS----VHY--SIPGYVRVSLECRHLLSRIFVADP  129 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~-------------------~~----~~~--~~~~~~~~~~~~~~li~~~l~~dP  129 (225)
                      |+|++|+.||................                   ..    ...  .......++.++.+||.+||+.+|
T Consensus       204 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P  283 (337)
T cd07852         204 GEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNP  283 (337)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCc
Confidence            99999999997655433322211110                   00    000  001122368899999999999999


Q ss_pred             CCCCCHHHHhcCcccCcC
Q 027327          130 EKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       130 ~~R~s~~eil~hp~~~~~  147 (225)
                      .+|||+.++++|||+.+.
T Consensus       284 ~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         284 NKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             ccccCHHHHhhChhhhhh
Confidence            999999999999999764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=6.1e-28  Score=201.53  Aligned_cols=142  Identities=39%  Similarity=0.669  Sum_probs=126.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      ++|||||||.+|||++.+.  .+||+|||++..+.......+.+|++.|.|||+..+..|.+..+|+||+|+++|.|+.|
T Consensus       174 k~ivHrdLk~eNilL~~~m--nikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~G  251 (596)
T KOG0586|consen  174 KNIVHRDLKAENILLDENM--NIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEG  251 (596)
T ss_pred             cceeccccchhhccccccc--ceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeec
Confidence            5899999999999998877  69999999999888888888999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      ..||.+...    .....+.+...+++|.+  ++.+|.++|+++|..+|.+|++++++++|.|.......
T Consensus       252 sLPFDG~~l----k~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  252 SLPFDGQNL----KELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             ccccCCccc----ccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            999987443    44445566677777775  89999999999999999999999999999999765444

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=1.4e-26  Score=185.41  Aligned_cols=141  Identities=29%  Similarity=0.431  Sum_probs=107.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++|+||+|+||+++.++  .+||+|||++.............++..|+|||++.+..++.+ +|+|||||++|+|++|
T Consensus       126 ~~i~h~~l~~~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Di~s~G~~l~~l~~~  202 (287)
T cd07838         126 HRIVHRDLKPQNILVTSDG--QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATP-VDMWSVGCIFAELFRR  202 (287)
T ss_pred             CCeeeccCChhhEEEccCC--CEEEeccCcceeccCCcccccccccccccChHHhccCCCCCc-chhhhHHHHHHHHHhC
Confidence            4799999999999998776  799999999876544444344467889999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc-cc-----------CC---------CCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH-YS-----------IP---------GYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~-~~-----------~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      .+||........+..+........ ..           .+         ....++..+.+||.+||..+|.+||++.+++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il  282 (287)
T cd07838         203 RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL  282 (287)
T ss_pred             CCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence            999987665554444433221100 00           00         0113457789999999999999999999999


Q ss_pred             cCccc
Q 027327          140 KHPWF  144 (225)
Q Consensus       140 ~hp~~  144 (225)
                      +||||
T Consensus       283 ~~~~~  287 (287)
T cd07838         283 QHPYF  287 (287)
T ss_pred             cCcCC
Confidence            99997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=2e-26  Score=185.52  Aligned_cols=140  Identities=33%  Similarity=0.484  Sum_probs=104.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccC-----CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......+++.|+|||++.+     ..++ .++|+|||||++
T Consensus       129 ~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~~Dv~slG~il  205 (292)
T cd06644         129 MKIIHRDLKAGNVLLTLDG--DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYD-YKADIWSLGITL  205 (292)
T ss_pred             CCeeecCCCcceEEEcCCC--CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCC-chhhhHhHHHHH
Confidence            4899999999999998666  79999999986532221 2233458889999999853     2333 348999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcc-cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+|++|..||.........    .+.... .........++.++.+||.+||..+|.+||++.++++||||..-
T Consensus       206 ~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         206 IEMAQIEPPHHELNPMRVL----LKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             HHHhcCCCCCccccHHHHH----HHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            9999999999764432222    222221 11222234578899999999999999999999999999999653

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.5e-27  Score=197.44  Aligned_cols=141  Identities=30%  Similarity=0.413  Sum_probs=115.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc---CCccCCCcccHHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS---RKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~---~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +.||||||..|||+...+  .|||+|||.|...   ....+++|||+|||||++.   .+.|+++ +|||||||++.+|.
T Consensus       146 ~~IHRDiKAGNILLse~g--~VKLaDFGSAsi~---~PAnsFvGTPywMAPEVILAMDEGqYdgk-vDvWSLGITCIELA  219 (948)
T KOG0577|consen  146 NRIHRDIKAGNILLSEPG--LVKLADFGSASIM---APANSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELA  219 (948)
T ss_pred             hHHhhhccccceEecCCC--eeeeccccchhhc---CchhcccCCccccchhHheeccccccCCc-cceeeccchhhhhh
Confidence            579999999999998777  7999999998754   3456789999999999985   4668777 89999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCccc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEF  152 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~~  152 (225)
                      -.++|+.+.+....+..+.+.    ..+.-....+|..++.|+..||++-|..|||.+++++|+|+....+...
T Consensus       220 ERkPPlFnMNAMSALYHIAQN----esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tv  289 (948)
T KOG0577|consen  220 ERKPPLFNMNAMSALYHIAQN----ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTV  289 (948)
T ss_pred             hcCCCccCchHHHHHHHHHhc----CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchH
Confidence            999998887665555544332    2222223468999999999999999999999999999999988766544

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-26  Score=188.45  Aligned_cols=142  Identities=27%  Similarity=0.363  Sum_probs=101.5

Q ss_pred             CceEecCCCCCcEEEcC----CCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG----SKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~----~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~   72 (225)
                      +||+||||||+||+++.    ++  .+||+|||++........    .....+++.|+|||++.+....+.++|+|||||
T Consensus       127 ~~i~h~dlkp~Nil~~~~~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~  204 (316)
T cd07842         127 NWVLHRDLKPANILVMGEGPERG--VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGC  204 (316)
T ss_pred             CCEeeCCCCHHHEEEcCCCCccc--eEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHH
Confidence            48999999999999987    44  799999999875433222    223467889999998876543345599999999


Q ss_pred             HHHHHHhCCCCCCCCCChh---------HHHHHHHHHhcc-------------------cccCCCCC------------C
Q 027327           73 TLYVMLVGAYPFEDPEDPR---------NFKTTIQRILSV-------------------HYSIPGYV------------R  112 (225)
Q Consensus        73 il~~ll~g~~pf~~~~~~~---------~~~~~~~~~~~~-------------------~~~~~~~~------------~  112 (225)
                      ++|+|++|+.||.......         .+...+..+...                   ........            .
T Consensus       205 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (316)
T cd07842         205 IFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKK  284 (316)
T ss_pred             HHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccC
Confidence            9999999999997654321         111111100000                   00001111            4


Q ss_pred             CCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327          113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus       113 ~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      .+..+.+++.+||..+|++|||+.++++||||
T Consensus       285 ~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         285 PDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             CCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            56789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.9e-27  Score=194.11  Aligned_cols=130  Identities=28%  Similarity=0.440  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCc---ccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~---~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +++|||||-..|||++.+.  .+||+|||+|+..... .....   --...|.|||.+....++.+ +|||||||+||||
T Consensus       322 ~~~IHRDLAARNiLV~~~~--~vKIsDFGLAr~~~d~-~Y~~~~~~kfPIkWtAPEa~~~~~FS~k-SDVWSFGVlL~E~  397 (468)
T KOG0197|consen  322 KNYIHRDLAARNILVDEDL--VVKISDFGLARLIGDD-EYTASEGGKFPIKWTAPEALNYGKFSSK-SDVWSFGVLLWEL  397 (468)
T ss_pred             CCccchhhhhhheeeccCc--eEEEcccccccccCCC-ceeecCCCCCCceecCHHHHhhCCcccc-cceeehhhhHHHH
Confidence            5899999999999998877  7999999999943322 22111   23457999999999999877 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      ++ |+.||.+....+.+..     +...+++|.+..+|+++.++++.||+.+|++|||++.+.
T Consensus       398 fT~G~~py~~msn~ev~~~-----le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  398 FTYGRVPYPGMSNEEVLEL-----LERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             hccCCCCCCCCCHHHHHHH-----HhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            98 8999988766443332     344567788888999999999999999999999999664

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=1.5e-26  Score=182.32  Aligned_cols=137  Identities=37%  Similarity=0.550  Sum_probs=107.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.+.. .+||+|||++.............++..|+|||.+.+..++.+ +|+||+|+++|+|++|
T Consensus       120 ~~i~h~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~~l~~~  197 (256)
T cd08220         120 KLILHRDLKTQNILLDKHKM-VVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQK-SDIWALGCVLYELASL  197 (256)
T ss_pred             CCeecCCCCHHHEEEcCCCC-EEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcc-cchHHHHHHHHHHHhC
Confidence            48999999999999975542 589999999986655444445578899999999987766544 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      ..||.........    ..+..... .+....++..+++++.+||..+|.+|||+.++++||||
T Consensus       198 ~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         198 KRAFEAANLPALV----LKIMSGTF-APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             CCCcccCchHHHH----HHHHhcCC-CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            9999765443222    22222111 12223478899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.94  E-value=2e-26  Score=182.26  Aligned_cols=136  Identities=32%  Similarity=0.508  Sum_probs=107.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .+|+||||||+||+++.++  .+||+|||++........ .....+++.|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       129 ~~i~h~dl~p~nili~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~-~Dv~slG~il~~l~~  205 (265)
T cd08217         129 NTVLHRDLKPANIFLDANN--NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEK-SDIWSLGCLIYELCA  205 (265)
T ss_pred             CcceecCCCHHHEEEecCC--CEEEecccccccccCCcccccccccCCCccChhhhcCCCCCch-hHHHHHHHHHHHHHH
Confidence            3799999999999998766  799999999886554433 334468999999999987776544 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..||..... .   .....+...... .....++..+.+++.+||..+|.+||++.+|++|||+
T Consensus       206 g~~p~~~~~~-~---~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         206 LSPPFTARNQ-L---QLASKIKEGKFR-RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             CCCcccCcCH-H---HHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            9999986542 2   222233322221 2223578999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.94  E-value=6.8e-27  Score=191.30  Aligned_cols=143  Identities=22%  Similarity=0.394  Sum_probs=99.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--------CCCCcccCCCCCccccccCC--ccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--------QPKSTVGTPAYIAPEVLSRK--EYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--------~~~~~~g~~~y~aPE~l~~~--~~~~~~~Diwsl   70 (225)
                      +||+||||||+|||++.++  .++++||+.+.......        ......++..|+|||++.+.  .++. ++|||||
T Consensus       120 ~~iiH~dlkp~Nil~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~Diwsl  196 (327)
T cd08227         120 MGYVHRSVKASHILISVDG--KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA-KSDIYSV  196 (327)
T ss_pred             CCEecCCCChhhEEEecCC--cEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCc-hhhHHHH
Confidence            4899999999999998766  69999998654322111        11223467789999998753  4544 4999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChhHHHHHHHHHhccc----------------------------------------ccCCCC
Q 027327           71 GVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH----------------------------------------YSIPGY  110 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~  110 (225)
                      ||++|+|++|+.||....................                                        ...+..
T Consensus       197 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
T cd08227         197 GITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYN  276 (327)
T ss_pred             HHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccc
Confidence            9999999999999976443222111111000000                                        000011


Q ss_pred             CCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327          111 VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       111 ~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ..+++.+.+||++||++||.+|||+.++++||||.+
T Consensus       277 ~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         277 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             cccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence            235678999999999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.94  E-value=1.7e-26  Score=184.88  Aligned_cols=140  Identities=32%  Similarity=0.526  Sum_probs=106.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC-ccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK-EYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~-~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++...... ......|+..|+|||++.+. .++ .++|+||+|+++|+|++
T Consensus       116 ~~i~H~di~p~nili~~~~--~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~-~~~Di~s~G~~l~~l~~  191 (278)
T cd05606         116 RFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYD-SSADWFSLGCMLFKLLR  191 (278)
T ss_pred             CCEEcCCCCHHHEEECCCC--CEEEccCcCccccCcc-CCcCcCCCcCCcCcHHhcCCCCCC-cccchHhHHHHHHHHHh
Confidence            4799999999999998776  7999999998754322 22345789999999998754 454 44899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||........ ..............+  ..++..+.+++.+||..+|.+||     ++.++++||||...
T Consensus       192 g~~p~~~~~~~~~-~~~~~~~~~~~~~~~--~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~  261 (278)
T cd05606         192 GHSPFRQHKTKDK-HEIDRMTLTMAVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL  261 (278)
T ss_pred             CCCCCCCCCccch-HHHHHHhhccCCCCC--CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence            9999976532211 122222222222333  24689999999999999999999     99999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.94  E-value=9.8e-27  Score=190.89  Aligned_cols=148  Identities=28%  Similarity=0.377  Sum_probs=106.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+||+++.++  .+||+|||++........     .....++..|+|||.+.+......++|+|||||++|
T Consensus       126 ~~ivH~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~  203 (334)
T cd07855         126 ANVIHRDLKPSNLLVNEDC--ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFA  203 (334)
T ss_pred             CCeecCCCCHHHEEEcCCC--cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHH
Confidence            4899999999999998776  799999999875433221     123468889999999866443345599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHH-------------------Hhcccc---cCC---CCCCCCHHHHHHHHhhcccCCC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQR-------------------ILSVHY---SIP---GYVRVSLECRHLLSRIFVADPE  130 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~-------------------~~~~~~---~~~---~~~~~~~~~~~li~~~l~~dP~  130 (225)
                      +|++|+.||........+..+...                   ......   ..+   .....+.++++||++||+.+|.
T Consensus       204 el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  283 (334)
T cd07855         204 EMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPE  283 (334)
T ss_pred             HHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChh
Confidence            999999999765433222111110                   000000   000   0134688999999999999999


Q ss_pred             CCCCHHHHhcCcccCcCCCc
Q 027327          131 KRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus       131 ~R~s~~eil~hp~~~~~~~~  150 (225)
                      +|||+.+++.||||.+....
T Consensus       284 ~Rpt~~~~l~~~~~~~~~~~  303 (334)
T cd07855         284 ERITVEQALQHPFLAQYHDP  303 (334)
T ss_pred             hCcCHHHHHhChhhhhccCC
Confidence            99999999999999865443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.94  E-value=1.6e-26  Score=185.13  Aligned_cols=142  Identities=27%  Similarity=0.385  Sum_probs=104.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|++||||+|+||+++.++  .++|+|||++....... ......++..|+|||++.+......++|+||||+++|+|++
T Consensus       118 ~~~~H~dl~p~nil~~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~  195 (283)
T cd07835         118 HRVLHRDLKPQNLLIDREG--ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN  195 (283)
T ss_pred             CCeeCCCCCHHHEEEcCCC--cEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998765  79999999987543222 12233568899999988665433445999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc-----------------c--cc----CCCCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV-----------------H--YS----IPGYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~-----------------~--~~----~~~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |..||.............+.....                 .  ..    ......++..+.++|.+||+.+|.+|||+.
T Consensus       196 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  275 (283)
T cd07835         196 RRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAK  275 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            999998765433333322211000                 0  00    001234678999999999999999999999


Q ss_pred             HHhcCccc
Q 027327          137 EIQKHPWF  144 (225)
Q Consensus       137 eil~hp~~  144 (225)
                      ++++||||
T Consensus       276 ~il~~~~~  283 (283)
T cd07835         276 AALQHPYF  283 (283)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.94  E-value=2.7e-26  Score=180.95  Aligned_cols=136  Identities=30%  Similarity=0.494  Sum_probs=105.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .+||+|||+++....... .....+++.|+|||++.+..++.+ +|+||||+++|+|++
T Consensus       120 ~~i~h~dl~~~nili~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~  196 (256)
T cd08529         120 KKILHRDIKSLNLFLDAYD--NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEK-SDVWALGVVLYECCT  196 (256)
T ss_pred             CCcccCCCCcceEEEeCCC--CEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCc-cchHHHHHHHHHHHh
Confidence            4899999999999998766  799999999876543322 223468889999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+.||.......    ...++...... +....++..+.+++.+||+.+|++||++.++++|||+
T Consensus       197 g~~p~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         197 GKHPFDANNQGA----LILKIIRGVFP-PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCC-CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            999997654322    22223222221 1112578899999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.94  E-value=1.9e-28  Score=201.82  Aligned_cols=150  Identities=37%  Similarity=0.645  Sum_probs=123.1

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||||+||||+|||+.+ +..+++||||||+|+........++.+|||.|+|||+++.+.|... .|+||.|+|+|.-+.
T Consensus       683 knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrS-LDMWSVGVIiYVsLS  761 (888)
T KOG4236|consen  683 KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRS-LDMWSVGVIIYVSLS  761 (888)
T ss_pred             cceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhcccccc-ccceeeeEEEEEEec
Confidence            68999999999999964 3445799999999999988888889999999999999999999866 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCcccccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEE  155 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~~~~~  155 (225)
                      |.+||....+.   ...++.. ...++..++..+++++.+||..+|++.-.+|.|+...|.|||++....+..+.+
T Consensus       762 GTFPFNEdEdI---ndQIQNA-aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRe  833 (888)
T KOG4236|consen  762 GTFPFNEDEDI---NDQIQNA-AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRE  833 (888)
T ss_pred             ccccCCCccch---hHHhhcc-ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHH
Confidence            99999764432   2222211 122333456679999999999999999999999999999999987655444433

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.94  E-value=2.7e-26  Score=186.29  Aligned_cols=141  Identities=29%  Similarity=0.553  Sum_probs=103.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      |++||||||+|||++.++  .+||+|||++...... ......+++.|+|||++.+..++.+ +|+|||||++|+|++|+
T Consensus       120 ~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~-~DiwslG~~l~~l~~g~  195 (308)
T cd06615         120 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYTVQ-SDIWSLGLSLVEMAIGR  195 (308)
T ss_pred             CEEECCCChHHEEEecCC--cEEEccCCCccccccc-ccccCCCCcCccChhHhcCCCCCcc-chHHHHHHHHHHHHhCC
Confidence            799999999999998766  6999999998754322 2234578899999999877766554 99999999999999999


Q ss_pred             CCCCCCCChhHHHHHHH---------------------------------HHhcccccCCCCCCCCHHHHHHHHhhcccC
Q 027327           82 YPFEDPEDPRNFKTTIQ---------------------------------RILSVHYSIPGYVRVSLECRHLLSRIFVAD  128 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  128 (225)
                      .||..... ........                                 .+............++.++++|+.+||..+
T Consensus       196 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  274 (308)
T cd06615         196 YPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKN  274 (308)
T ss_pred             CCCCCcch-hhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCC
Confidence            99965332 11111110                                 000000000011136778999999999999


Q ss_pred             CCCCCCHHHHhcCcccCcC
Q 027327          129 PEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       129 P~~R~s~~eil~hp~~~~~  147 (225)
                      |.+|||+.++++||||.+.
T Consensus       275 P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         275 PKERADLKELTKHPFIKRA  293 (308)
T ss_pred             hhhCcCHHHHhcChhhhhc
Confidence            9999999999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=6.7e-27  Score=188.89  Aligned_cols=144  Identities=30%  Similarity=0.503  Sum_probs=108.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||++........ .....+++.|+|||.+.+..++.+ +|+|||||++|+|++
T Consensus       134 ~~i~H~dL~p~Nili~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slGvil~~l~t  210 (297)
T cd06656         134 NQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMVE  210 (297)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcH-HHHHHHHHHHHHHHh
Confidence            4899999999999998766  799999999875433222 223468889999999987776544 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      |..||............   .............++..+++|+.+||..+|.+||++.++++||||....+.
T Consensus       211 g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~  278 (297)
T cd06656         211 GEPPYLNENPLRALYLI---ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL  278 (297)
T ss_pred             CCCCCCCCCcchheeee---ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence            99999765432211111   111111222233578889999999999999999999999999999765443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.94  E-value=1.1e-26  Score=184.48  Aligned_cols=139  Identities=27%  Similarity=0.419  Sum_probs=101.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCcccccc---CCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLS---RKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~---~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......|+..|+|||++.   ...++ .++|+|||||++|+
T Consensus       125 ~~i~H~dlkp~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~~DvwSlG~il~~  201 (267)
T cd06645         125 KGKMHRDIKGANILLTDNG--HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYN-QLCDIWAVGITAIE  201 (267)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCC-chhhhHHHHHHHHH
Confidence            4899999999999998766  69999999986543222 223346899999999974   33354 44999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      |++|..||................ ...........++..+.+|+.+||..+|++||++.++++|||
T Consensus       202 l~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         202 LAELQPPMFDLHPMRALFLMTKSN-FQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HhcCCCCcccccchhhHHhhhccC-CCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            999999986544322221111110 001111122247789999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.94  E-value=1.9e-26  Score=186.85  Aligned_cols=142  Identities=27%  Similarity=0.390  Sum_probs=103.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC------------CCCcccCCCCCccccccCCccCCCcccHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ------------PKSTVGTPAYIAPEVLSRKEYDGKIADVW   68 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~------------~~~~~g~~~y~aPE~l~~~~~~~~~~Diw   68 (225)
                      +||+||||||+||+++.++  .+||+|||+++.......            .....+++.|+|||.+.+....+.++|+|
T Consensus       134 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  211 (311)
T cd07866         134 NHILHRDIKAANILIDNQG--ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIW  211 (311)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhH
Confidence            4899999999999998776  799999999875432211            11224678899999886654334459999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhccc----------------c---cCC-----CCCCCCHHHHHHHHhh
Q 027327           69 SCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH----------------Y---SIP-----GYVRVSLECRHLLSRI  124 (225)
Q Consensus        69 slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------------~---~~~-----~~~~~~~~~~~li~~~  124 (225)
                      ||||++|+|++|+.||.+.........+........                .   ..+     ....++..+.+||.+|
T Consensus       212 slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  291 (311)
T cd07866         212 GIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKL  291 (311)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHH
Confidence            999999999999999987665443333322111000                0   000     0123456889999999


Q ss_pred             cccCCCCCCCHHHHhcCccc
Q 027327          125 FVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..+|.+|||+.+++.||||
T Consensus       292 l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         292 LSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             cccCcccCcCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=2e-26  Score=183.10  Aligned_cols=137  Identities=31%  Similarity=0.439  Sum_probs=101.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||+++......    ......++..|+|||.+.+..++.. +|+||+||++|+
T Consensus       125 ~~i~H~~l~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~i~~e  201 (266)
T cd06651         125 NMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRK-ADVWSLGCTVVE  201 (266)
T ss_pred             CCeeeCCCCHHHEEECCCC--CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCch-hhhHHHHHHHHH
Confidence            4799999999999998766  69999999987543211    1122357889999999987776555 899999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      |++|+.||..........    ..............++..+++|+ +||..+|.+||++.++++||||.
T Consensus       202 l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         202 MLTEKPPWAEYEAMAAIF----KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHHCCCCccccchHHHHH----HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            999999997654332222    11111111111224678889998 67778999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=2.3e-26  Score=189.28  Aligned_cols=146  Identities=25%  Similarity=0.356  Sum_probs=104.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++..+. .+||+|||+++.......    .....++..|+|||++.+....+.++|||||||++|+
T Consensus       133 ~givH~dikp~Nili~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  211 (342)
T cd07854         133 ANVLHRDLKPANVFINTEDL-VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE  211 (342)
T ss_pred             CCcccCCCCHHHEEEcCCCc-eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHH
Confidence            48999999999999975432 589999999875432211    1223578899999987654444455999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHH------------------hc-cc--ccCC---CCCCCCHHHHHHHHhhcccCCCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRI------------------LS-VH--YSIP---GYVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~------------------~~-~~--~~~~---~~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      |++|+.||................                  .. ..  ...+   ....++.++++||.+||..||.+|
T Consensus       212 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  291 (342)
T cd07854         212 MLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDR  291 (342)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhc
Confidence            999999997655433322221110                  00 00  0000   012467889999999999999999


Q ss_pred             CCHHHHhcCcccCcC
Q 027327          133 ITIPEIQKHPWFLKN  147 (225)
Q Consensus       133 ~s~~eil~hp~~~~~  147 (225)
                      ||+.++++||||...
T Consensus       292 ~t~~ell~h~~~~~~  306 (342)
T cd07854         292 LTAEEALMHPYMSCY  306 (342)
T ss_pred             cCHHHHhCCCccccc
Confidence            999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=9.1e-28  Score=197.32  Aligned_cols=143  Identities=30%  Similarity=0.521  Sum_probs=108.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+|.||||.|||++.+.. .+||||||.|.....+ ....+..+..|.|||++.+.+|+.. .|+||.||++|||.+|
T Consensus       555 c~vlHaDIKPDNiLVNE~k~-iLKLCDfGSA~~~~en-eitPYLVSRFYRaPEIiLG~~yd~~-iD~WSvgctLYElYtG  631 (752)
T KOG0670|consen  555 CGVLHADIKPDNILVNESKN-ILKLCDFGSASFASEN-EITPYLVSRFYRAPEIILGLPYDYP-IDTWSVGCTLYELYTG  631 (752)
T ss_pred             cCeeecccCccceEeccCcc-eeeeccCccccccccc-cccHHHHHHhccCcceeecCcccCC-ccceeeceeeEEeecc
Confidence            48999999999999987654 7999999999765443 3344557789999999999999877 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHH-------Hh-cccccCCC---------------------------------------CCCC
Q 027327           81 AYPFEDPEDPRNFKTTIQR-------IL-SVHYSIPG---------------------------------------YVRV  113 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~-------~~-~~~~~~~~---------------------------------------~~~~  113 (225)
                      +..|.+......+.-.+.-       ++ ...+....                                       ...+
T Consensus       632 kIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~  711 (752)
T KOG0670|consen  632 KILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRL  711 (752)
T ss_pred             ceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCC
Confidence            9999998776544332210       00 00000000                                       0001


Q ss_pred             C-------HHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327          114 S-------LECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       114 ~-------~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +       ..+++||.+||..||++|.|+.++|+||||..
T Consensus       712 ~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  712 PDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             CchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            1       25789999999999999999999999999964

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2.5e-26  Score=184.28  Aligned_cols=143  Identities=27%  Similarity=0.488  Sum_probs=107.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      ||+||||||+||+++.++  .++|+|||++...... ......++..|+|||++.+..++.+ +|+|||||++|++++|+
T Consensus       124 ~i~H~dl~p~nil~~~~~--~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~-~Di~slG~~l~~l~tg~  199 (284)
T cd06620         124 RIMHRDIKPSNILVNSRG--QIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQGGKYTVK-SDVWSLGISIIELALGK  199 (284)
T ss_pred             CeeccCCCHHHEEECCCC--cEEEccCCcccchhhh-ccCccccCcccCCHHHHccCCCCcc-chHHHHHHHHHHHHhCC
Confidence            799999999999998766  7999999998643222 2234468999999999877766555 99999999999999999


Q ss_pred             CCCCCCCCh-------hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           82 YPFEDPEDP-------RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        82 ~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      .||......       .........+............++.++.+|+.+||..||.+|||+.++++|+||.+..
T Consensus       200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         200 FPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             CCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            999764432       1112222333222211111123678899999999999999999999999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=1.3e-26  Score=185.35  Aligned_cols=142  Identities=30%  Similarity=0.388  Sum_probs=105.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+|+||||+||+++.++  .+||+|||.+....... ......++..|+|||.+.+....+.++|+||||+++|+|++
T Consensus       117 ~~i~H~dl~p~nili~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~t  194 (283)
T cd05118         117 HGILHRDLKPENLLINTEG--VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLS  194 (283)
T ss_pred             CCeeecCcCHHHEEECCCC--cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHh
Confidence            4899999999999998766  79999999987654433 22234578889999998776333455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc---------------cCC---------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY---------------SIP---------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~---------------~~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||...+....+......+.....               ..+         ....++.++++||.+||..+|.+||++
T Consensus       195 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~  274 (283)
T cd05118         195 RRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA  274 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH
Confidence            99999776554433333222111000               000         112367889999999999999999999


Q ss_pred             HHHhcCccc
Q 027327          136 PEIQKHPWF  144 (225)
Q Consensus       136 ~eil~hp~~  144 (225)
                      .+++.||||
T Consensus       275 ~~ll~~~~~  283 (283)
T cd05118         275 EQALAHPYF  283 (283)
T ss_pred             HHHhhCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.94  E-value=2e-26  Score=185.64  Aligned_cols=145  Identities=26%  Similarity=0.343  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++..+. .+||+|||++....... ......+++.|+|||.+.+......++|+||+||++|+|++
T Consensus       121 ~~i~H~dl~p~nill~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~t  199 (294)
T PLN00009        121 HRVLHRDLKPQNLLIDRRTN-ALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN  199 (294)
T ss_pred             CCeeCCCCCcceEEEECCCC-EEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            48999999999999975432 68999999987543322 22334678899999998765433445999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc-----------------ccCC------CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH-----------------YSIP------GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~-----------------~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |..||..........+.........                 ...+      ....++.++++++.+||..+|.+||++.
T Consensus       200 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~  279 (294)
T PLN00009        200 QKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITAR  279 (294)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHH
Confidence            9999987554433333222111000                 0000      0134678899999999999999999999


Q ss_pred             HHhcCcccCc
Q 027327          137 EIQKHPWFLK  146 (225)
Q Consensus       137 eil~hp~~~~  146 (225)
                      ++++||||..
T Consensus       280 ~~l~~~~~~~  289 (294)
T PLN00009        280 AALEHEYFKD  289 (294)
T ss_pred             HHhcCchHhH
Confidence            9999999975

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=1.6e-26  Score=186.37  Aligned_cols=146  Identities=28%  Similarity=0.368  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .+||+|||++....... ......+++.|+|||.+.+....+.++|+|||||++|+|++
T Consensus       121 ~~i~H~dl~p~nill~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~  198 (298)
T cd07841         121 NWILHRDLKPNNLLIASDG--VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLL  198 (298)
T ss_pred             CCeeecCCChhhEEEcCCC--CEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHc
Confidence            4899999999999998776  79999999987654332 22233567889999998654444455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc-------cC---------------CCCCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY-------SI---------------PGYVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~---------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      |.+||........+............       ..               ......+..+.+||.+||.++|.+|||+.+
T Consensus       199 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e  278 (298)
T cd07841         199 RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ  278 (298)
T ss_pred             CCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHH
Confidence            98888766554433333221100000       00               001235678999999999999999999999


Q ss_pred             HhcCcccCcCC
Q 027327          138 IQKHPWFLKNL  148 (225)
Q Consensus       138 il~hp~~~~~~  148 (225)
                      +++|+||.+..
T Consensus       279 ~l~~~~~~~~~  289 (298)
T cd07841         279 ALEHPYFSNDP  289 (298)
T ss_pred             HhhCccccCCC
Confidence            99999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.94  E-value=4.6e-26  Score=183.29  Aligned_cols=136  Identities=35%  Similarity=0.625  Sum_probs=108.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||+|.|||++.++  .+||+|||++......  .....+++.|+|||.+.+...+.+ +|+||||+++|+|++|
T Consensus       120 ~~i~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g  194 (290)
T cd05580         120 LDIVYRDLKPENLLLDSDG--YIKITDFGFAKRVKGR--TYTLCGTPEYLAPEIILSKGYGKA-VDWWALGILIYEMLAG  194 (290)
T ss_pred             CCEecCCCCHHHEEECCCC--CEEEeeCCCccccCCC--CCCCCCCccccChhhhcCCCCCcc-ccHHHHHHHHHHHHhC
Confidence            4899999999999998776  7999999998765433  334468899999999977766544 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      ..||......    .....+.......+  ..++..++++|++||..+|.+|+     ++.++++||||...
T Consensus       195 ~~p~~~~~~~----~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  260 (290)
T cd05580         195 YPPFFDDNPI----QIYEKILEGKVRFP--SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI  260 (290)
T ss_pred             CCCCCCCCHH----HHHHHHhcCCccCC--ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence            9999765532    22223333333333  34689999999999999999999     89999999999654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=2.3e-26  Score=184.37  Aligned_cols=142  Identities=31%  Similarity=0.481  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||+|+||+++.++  .+||+|||++.......  ......++..|+|||++.+....+.++|+||||+++|+|+
T Consensus       119 ~~i~H~dl~~~ni~~~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~  196 (288)
T cd07833         119 HNIIHRDIKPENILVSESG--VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELL  196 (288)
T ss_pred             CCeecCCCCHHHeEECCCC--CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHH
Confidence            4799999999999998766  79999999987654433  2234567889999999987733345599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhccc------------c---cCC-----------CCCCCCHHHHHHHHhhcccCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVH------------Y---SIP-----------GYVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~------------~---~~~-----------~~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      +|+.||....................            +   ..+           ....++.++++||++||..+|.+|
T Consensus       197 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  276 (288)
T cd07833         197 DGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKER  276 (288)
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhc
Confidence            99999976554333222211110000            0   000           011247889999999999999999


Q ss_pred             CCHHHHhcCccc
Q 027327          133 ITIPEIQKHPWF  144 (225)
Q Consensus       133 ~s~~eil~hp~~  144 (225)
                      ||++++++||||
T Consensus       277 ps~~~il~~~~f  288 (288)
T cd07833         277 LTCDELLQHPYF  288 (288)
T ss_pred             ccHHHHhcCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=1.4e-26  Score=187.11  Aligned_cols=140  Identities=31%  Similarity=0.567  Sum_probs=107.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++........ .....++..|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       136 ~~ivH~dl~p~Nill~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~~  212 (297)
T cd06659         136 QGVIHRDIKSDSILLTLDG--RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTE-VDIWSLGIMVIEMVD  212 (297)
T ss_pred             CCeecCCCCHHHeEEccCC--cEEEeechhHhhcccccccccceecCccccCHHHHccCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  799999999865433222 233468899999999987777554 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc-cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||..........    .+... .........++..+.++|.+||+.+|.+||++.++++||||.+.
T Consensus       213 g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         213 GEPPYFSDSPVQAMK----RLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             CCCCCCCCCHHHHHH----HHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence            999997654332221    22111 11122233578899999999999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=4e-26  Score=183.61  Aligned_cols=142  Identities=27%  Similarity=0.399  Sum_probs=100.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++...... ......+++.|+|||.+.+....+.++|+||||+++|+|++
T Consensus       122 ~~i~H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~  199 (291)
T cd07870         122 QHILHRDLKPQNLLISYLG--ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQ  199 (291)
T ss_pred             CCcccCCCChHHEEEcCCC--cEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998766  79999999987543322 22234578899999998754432344899999999999999


Q ss_pred             CCCCCCCCCChhH-HHHHHHHHh-----------ccc------ccC--C-------CCCCCCHHHHHHHHhhcccCCCCC
Q 027327           80 GAYPFEDPEDPRN-FKTTIQRIL-----------SVH------YSI--P-------GYVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        80 g~~pf~~~~~~~~-~~~~~~~~~-----------~~~------~~~--~-------~~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      |..||........ +........           ...      ...  +       .....+..+.+++.+||..||.+|
T Consensus       200 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R  279 (291)
T cd07870         200 GQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDR  279 (291)
T ss_pred             CCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccC
Confidence            9999976543211 111110000           000      000  0       001135688999999999999999


Q ss_pred             CCHHHHhcCccc
Q 027327          133 ITIPEIQKHPWF  144 (225)
Q Consensus       133 ~s~~eil~hp~~  144 (225)
                      ||+.+++.||||
T Consensus       280 ~t~~~~l~h~~~  291 (291)
T cd07870         280 ISAQDALLHPYF  291 (291)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.94  E-value=3.5e-26  Score=179.22  Aligned_cols=137  Identities=32%  Similarity=0.490  Sum_probs=105.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++||||+|+||+++.++  .++|+|||.+.............++..|+|||.+.+..++.+ +|+||||+++|+|++|
T Consensus       117 ~~i~h~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Dv~slG~il~~l~~g  193 (253)
T cd05122         117 NGIIHRDIKAANILLTSDG--EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYK-ADIWSLGITAIELAEG  193 (253)
T ss_pred             CCEecCCCCHHHEEEccCC--eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCcc-ccHHHHHHHHHHHHhC
Confidence            4899999999999998766  799999999876544432344568889999999987766544 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      +.||.............   .......+....++..+.++|.+||..+|.+|||+.++++|||
T Consensus       194 ~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         194 KPPYSELPPMKALFKIA---TNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             CCCCCCCchHHHHHHHH---hcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            99997654322222211   1222222332335889999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=3e-26  Score=182.50  Aligned_cols=141  Identities=30%  Similarity=0.417  Sum_probs=102.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCc--cCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKE--YDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~--~~~~~~DiwslG~il~   75 (225)
                      +|++||||+|+||+++.++  .++|+|||+++.......   .....++..|+|||.+....  ++ .++|+||||+++|
T Consensus       127 ~~i~H~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~~~Dv~slG~~l~  203 (272)
T cd06629         127 KGILHRDLKADNLLVDADG--ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYS-AKVDIWSLGCVVL  203 (272)
T ss_pred             CCeeecCCChhhEEEcCCC--eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCC-ccchhHHHHHHHH
Confidence            4899999999999998766  799999999875432211   12335788999999987654  44 4499999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      ++++|..||............................++.++++||.+||.++|.+|||+.++++||||
T Consensus       204 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         204 EMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            999999999654332222211111111111111123468899999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.94  E-value=3.1e-26  Score=185.47  Aligned_cols=141  Identities=26%  Similarity=0.392  Sum_probs=101.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .|++||||||+||+++.++  .+||+|||++........     .....++..|+|||.+.+....+.++|+||||+++|
T Consensus       138 ~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~  215 (310)
T cd07865         138 NKILHRDMKAANILITKDG--ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMA  215 (310)
T ss_pred             CCeeccCCCHHHEEECCCC--cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHH
Confidence            4899999999999998776  799999999875433221     123357888999999876543345599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhccc----------------ccCCC-----------CCCCCHHHHHHHHhhcccC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVH----------------YSIPG-----------YVRVSLECRHLLSRIFVAD  128 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------------~~~~~-----------~~~~~~~~~~li~~~l~~d  128 (225)
                      +|++|+.||......... ..+..+....                ...+.           ....+..+.+||.+||..|
T Consensus       216 el~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~  294 (310)
T cd07865         216 EMWTRSPIMQGNTEQHQL-TLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLD  294 (310)
T ss_pred             HHHhCCCCCCCCCHHHHH-HHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCC
Confidence            999999999765443222 1222211100                00000           0013567889999999999


Q ss_pred             CCCCCCHHHHhcCccc
Q 027327          129 PEKRITIPEIQKHPWF  144 (225)
Q Consensus       129 P~~R~s~~eil~hp~~  144 (225)
                      |.+|||+.++++||||
T Consensus       295 P~~R~t~~e~l~h~~f  310 (310)
T cd07865         295 PAKRIDADTALNHDFF  310 (310)
T ss_pred             hhhccCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.7e-26  Score=182.66  Aligned_cols=137  Identities=36%  Similarity=0.560  Sum_probs=104.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||+|+||+++.++  .+||+|||++.....   .....+++.|+|||.+.+..++.+ +|+||||+++|+|++|
T Consensus       116 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~il~~l~~g  189 (260)
T cd05611         116 RGIIHRDIKPENLLIDQTG--HLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGVGDDKM-SDWWSLGCVIFEFLFG  189 (260)
T ss_pred             CCeecCCCCHHHeEECCCC--cEEEeecccceeccc---cccCCCCcCccChhhhcCCCCcch-hhhHHHHHHHHHHHHC
Confidence            4799999999999998766  799999999875432   233457889999999987766544 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCCC---HHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRIT---IPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s---~~eil~hp~~~~~  147 (225)
                      ..||........+    ..+.....  .......++..+.+++.+||..+|.+||+   +++++.||||.+.
T Consensus       190 ~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         190 YPPFHAETPDAVF----DNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             CCCCCCCCHHHHH----HHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence            9999765443222    22222211  11122247899999999999999999995   5799999999653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=2.3e-26  Score=182.49  Aligned_cols=138  Identities=24%  Similarity=0.356  Sum_probs=104.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-------CCCCCcccCCCCCccccccCCccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-------SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-------~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~i   73 (225)
                      .||+|+||+|+||+++.++  .+||+|||++......       .......++..|+|||.+.+..++.+ +|+||||++
T Consensus       121 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slG~~  197 (265)
T cd06631         121 NCVVHRDIKGNNVMLMPNG--IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRK-SDIWSIGCT  197 (265)
T ss_pred             CCcccCCcCHHhEEECCCC--eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcch-hhHHHHHHH
Confidence            4799999999999998766  7999999998643211       11223458889999999987777655 999999999


Q ss_pred             HHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           74 LYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        74 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +|+|++|..||.............   .......+....++.++.+||++||..+|.+||++.++++||||
T Consensus       198 ~~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         198 VFEMATGKPPLASMDRLAAMFYIG---AHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHhCCCccccCChHHHHHHhh---hccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            999999999997644322221111   11011112223578899999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.6e-26  Score=183.61  Aligned_cols=140  Identities=32%  Similarity=0.486  Sum_probs=105.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccC-----CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+||+++.++  .++|+|||++........ .....+++.|+|||.+..     ..++ .++|+||||+++
T Consensus       122 ~~i~h~dl~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~-~~sDi~slG~il  198 (280)
T cd06611         122 HKVIHRDLKAGNILLTLDG--DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYD-YKADIWSLGITL  198 (280)
T ss_pred             CCcccCCCChhhEEECCCC--CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCC-ccccHHHHHHHH
Confidence            4899999999999998776  799999998765433222 223468899999999753     2233 349999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhccc-ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVH-YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+|++|..||.........    ..+.... ........++.++.+||.+||..+|.+||++.++++||||.+.
T Consensus       199 ~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         199 IELAQMEPPHHELNPMRVL----LKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHHhCCCCcccCCHHHHH----HHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            9999999999765433222    2222221 1122223578899999999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.3e-26  Score=181.89  Aligned_cols=139  Identities=29%  Similarity=0.431  Sum_probs=103.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCC---ccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRK---EYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~---~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......++..|+|||.+.+.   .++.+ +|+||||+++|+
T Consensus       120 ~~i~h~dl~p~ni~i~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~-~Di~slG~~l~~  196 (262)
T cd06613         120 TGKIHRDIKGANILLTEDG--DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGK-CDIWALGITAIE  196 (262)
T ss_pred             CCceecCCChhhEEECCCC--CEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCch-hhhHHHHHHHHH
Confidence            4799999999999998776  69999999987544322 22334688899999998765   56544 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      |++|..||.................. .........++.++.+|+++||..+|.+|||+.+++.|+|
T Consensus       197 ~~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         197 LAELQPPMFDLHPMRALFLISKSNFP-PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCC-CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            99999999765543322221111001 1111112346788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=3e-26  Score=184.23  Aligned_cols=142  Identities=30%  Similarity=0.469  Sum_probs=100.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||+++....... .....++..|+|||++.+....+.++|+||+|+++|+|++
T Consensus       122 ~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~  199 (291)
T cd07844         122 RRVLHRDLKPQNLLISERG--ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMAT  199 (291)
T ss_pred             CCeecccCCHHHEEEcCCC--CEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  699999999865332211 1223467889999998764433445999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc----------------ccC---------CCCCCCC--HHHHHHHHhhcccCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH----------------YSI---------PGYVRVS--LECRHLLSRIFVADPEKR  132 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~----------------~~~---------~~~~~~~--~~~~~li~~~l~~dP~~R  132 (225)
                      |+.||....................                ...         .....++  ..+.+++.+||..+|.+|
T Consensus       200 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~R  279 (291)
T cd07844         200 GRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKR  279 (291)
T ss_pred             CCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccc
Confidence            9999976543222111111110000                000         0011233  788999999999999999


Q ss_pred             CCHHHHhcCccc
Q 027327          133 ITIPEIQKHPWF  144 (225)
Q Consensus       133 ~s~~eil~hp~~  144 (225)
                      ||+.++++||||
T Consensus       280 ps~~e~l~~~~f  291 (291)
T cd07844         280 ISAAEAMKHPYF  291 (291)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=6.2e-26  Score=179.62  Aligned_cols=139  Identities=32%  Similarity=0.533  Sum_probs=105.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-----CCcccCCCCCccccccCCc---cCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-----KSTVGTPAYIAPEVLSRKE---YDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-----~~~~g~~~y~aPE~l~~~~---~~~~~~DiwslG~   72 (225)
                      .||+|+||+|+||+++.++  .+||+|||++.........     ....+++.|+|||.+.+..   +. .++|+||||+
T Consensus       118 ~~i~H~dl~~~nil~~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~-~~~Dv~s~G~  194 (264)
T cd06626         118 HGIVHRDIKPANIFLDHNG--VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHG-RAADIWSLGC  194 (264)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCC-cccchHHHHH
Confidence            4899999999999998766  7999999998765433221     1235788999999987655   44 4499999999


Q ss_pred             HHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           73 TLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        73 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      ++|++++|+.||..........  ...........|....++..+.+||.+||+.+|.+|||+.+++.|||+
T Consensus       195 il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         195 VVLEMATGKRPWSELDNEFQIM--FHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHHhCCCCccCCcchHHHH--HHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            9999999999997543322211  111112233344444568899999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.94  E-value=2.9e-26  Score=188.85  Aligned_cols=173  Identities=26%  Similarity=0.280  Sum_probs=117.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.++  .+||+|||++.....  ......+++.|+|||.+.+....+.++|+||||+++|++++|
T Consensus       137 ~gi~H~dlkp~Nill~~~~--~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g  212 (343)
T cd07880         137 AGIIHRDLKPGNLAVNEDC--ELKILDFGLARQTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG  212 (343)
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEeeccccccccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            4899999999999998766  799999999875432  223345788999999987643334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHh-------------------cccccC------CCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRIL-------------------SVHYSI------PGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~-------------------~~~~~~------~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      ..||.................                   ......      .....++..+.++|.+||..||.+|||+
T Consensus       213 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~  292 (343)
T cd07880         213 KPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITA  292 (343)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCH
Confidence            999976543322222211000                   000000      0113467889999999999999999999


Q ss_pred             HHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHH
Q 027327          136 PEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGII  179 (225)
Q Consensus       136 ~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (225)
                      .++++||||.............+..  ..-....+..+++..+.
T Consensus       293 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  334 (343)
T cd07880         293 AEALAHPYFEEFHDPEDETEAPPYD--DSFDEVDQSLEEWKRLT  334 (343)
T ss_pred             HHHhcCccHhhhcCcccccCCCCcc--ccHHhhccchHHHHHHH
Confidence            9999999998764433322222211  12233455666666544

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.93  E-value=3.2e-26  Score=183.48  Aligned_cols=142  Identities=27%  Similarity=0.468  Sum_probs=103.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||+|+||+++.++  .++|+|||++........ .....++..|+|||++.+....+.++||||||+++|+|++
T Consensus       119 ~~i~h~~l~p~ni~~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~  196 (286)
T cd07846         119 HNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLT  196 (286)
T ss_pred             CCccccCCCHHHEEECCCC--cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHc
Confidence            4799999999999998766  799999999875433222 2234578899999998764443455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc---------------cccCC----------CCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV---------------HYSIP----------GYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~----------~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      |+.||...................               ....+          ..+.++..+.+|+.+||..+|.+||+
T Consensus       197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~  276 (286)
T cd07846         197 GEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS  276 (286)
T ss_pred             CCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh
Confidence            999997654433222222110000               00000          12346788999999999999999999


Q ss_pred             HHHHhcCccc
Q 027327          135 IPEIQKHPWF  144 (225)
Q Consensus       135 ~~eil~hp~~  144 (225)
                      +.++++||||
T Consensus       277 ~~~il~~~~~  286 (286)
T cd07846         277 SSQLLHHEFF  286 (286)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=9e-27  Score=195.41  Aligned_cols=140  Identities=35%  Similarity=0.564  Sum_probs=108.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------------------------------------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------------------------------------------   38 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------------------------------------------   38 (225)
                      +|+|||||||+||||+.++  ++||+|||++..+....                                          
T Consensus       748 mGFIHRDiKPDNILIDrdG--HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r  825 (1034)
T KOG0608|consen  748 MGFIHRDIKPDNILIDRDG--HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQR  825 (1034)
T ss_pred             ccceecccCccceEEccCC--ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhh
Confidence            6999999999999999887  89999999985321100                                          


Q ss_pred             -CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHH
Q 027327           39 -QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC  117 (225)
Q Consensus        39 -~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (225)
                       .....+||+.|+|||++...+|+.. +|+||.|+|||+|+.|+.||..........+++.  +.....++...+++.++
T Consensus       826 ~~ahslvgt~nyiapevl~r~g~~q~-cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~n--w~~~l~~~~~~~ls~e~  902 (1034)
T KOG0608|consen  826 ILAHSLVGTPNYIAPEVLARTGYTQL-CDWWSVGVILYEMLVGQPPFLADTPGETQYKVIN--WRNFLHIPYQGNLSKEA  902 (1034)
T ss_pred             hhhhhhcCCCcccChHHhcccCcccc-chhhHhhHHHHHHhhCCCCccCCCCCcceeeeee--hhhccccccccccCHHH
Confidence             0013469999999999998888766 9999999999999999999987665544333332  22334556667899999


Q ss_pred             HHHHHhhcccCCCCCCC---HHHHhcCcccCc
Q 027327          118 RHLLSRIFVADPEKRIT---IPEIQKHPWFLK  146 (225)
Q Consensus       118 ~~li~~~l~~dP~~R~s---~~eil~hp~~~~  146 (225)
                      .+||.++. -.+..|..   +.++..||||+.
T Consensus       903 ~~li~kLc-~sad~RLGkng~d~vKaHpfFkg  933 (1034)
T KOG0608|consen  903 LDLIQKLC-CSADSRLGKNGADQVKAHPFFKG  933 (1034)
T ss_pred             HHHHHHHh-cChhhhhcccchhhhhcCccccc
Confidence            99999854 57888884   778999999974

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.93  E-value=3.8e-26  Score=180.72  Aligned_cols=141  Identities=33%  Similarity=0.507  Sum_probs=108.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC-CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~-~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++||||+|+||+++.++  .++|+|||++.......... ...++..|+|||.+....++.+ +|+||||+++|+|++
T Consensus       119 ~~~~H~~l~~~ni~~~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~~l~t  195 (264)
T cd06623         119 RHIIHRDIKPSNLLINSKG--EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYA-ADIWSLGLTLLECAL  195 (264)
T ss_pred             CCCccCCCCHHHEEECCCC--CEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987654433332 4467889999999987766555 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCC-CCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |..||..... .........+...... +.... ++..+.++|.+||..+|.+||++.++++|||+..
T Consensus       196 g~~p~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         196 GKFPFLPPGQ-PSFFELMQAICDGPPP-SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             CCCCCccccc-cCHHHHHHHHhcCCCC-CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence            9999976642 1122333333322211 22223 7889999999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.93  E-value=9.3e-27  Score=190.86  Aligned_cols=139  Identities=31%  Similarity=0.581  Sum_probs=103.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccC-----CccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~i   73 (225)
                      +||+||||||+|||++.++  .+||+|||+++........  ....|++.|+|||++.+     ..+. .++|+|||||+
T Consensus       121 ~~iiHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~DiwSlGvi  197 (331)
T cd05624         121 LHYVHRDIKPDNVLLDMNG--HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYG-PECDWWSLGVC  197 (331)
T ss_pred             CCeeeccCchHHEEEcCCC--CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCC-CcccEEeeehh
Confidence            5899999999999998766  7999999998754433222  23469999999999865     3344 44899999999


Q ss_pred             HHHHHhCCCCCCCCCChhHHHHHHHHHhccc--ccCCC-CCCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCc
Q 027327           74 LYVMLVGAYPFEDPEDPRNFKTTIQRILSVH--YSIPG-YVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLK  146 (225)
Q Consensus        74 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~  146 (225)
                      +|+|++|+.||........+    .++....  ...+. ...++.++++||.+||...+.+  |++++++++||||..
T Consensus       198 l~ell~g~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         198 MYEMLYGETPFYAESLVETY----GKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             hhhhhhCCCCccCCCHHHHH----HHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence            99999999999765443322    2332222  12222 2347899999999999876554  568999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=6.7e-26  Score=181.35  Aligned_cols=142  Identities=27%  Similarity=0.393  Sum_probs=105.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++|+||+|.||+++.++  .++|+|||++.............++..|+|||++.+....+.++|+||||+++++|++|
T Consensus       118 ~~i~H~dl~~~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g  195 (283)
T cd07830         118 HGFFHRDLKPENLLVSGPE--VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTL  195 (283)
T ss_pred             CCcccCCCChhhEEEcCCC--CEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhC
Confidence            4899999999999998766  79999999987655444444556888999999886544334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc---------------ccccCC---------CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS---------------VHYSIP---------GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~---------------~~~~~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      +.||..................               .....+         .....+..+++||++||..+|.+|||+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  275 (283)
T cd07830         196 RPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTAS  275 (283)
T ss_pred             CCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHH
Confidence            9999776554433322211000               000000         0112367899999999999999999999


Q ss_pred             HHhcCccc
Q 027327          137 EIQKHPWF  144 (225)
Q Consensus       137 eil~hp~~  144 (225)
                      +++.||||
T Consensus       276 ei~~~~~~  283 (283)
T cd07830         276 QALQHPYF  283 (283)
T ss_pred             HHhhCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=4e-26  Score=182.77  Aligned_cols=142  Identities=27%  Similarity=0.442  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .+||+|||++........ .....++..|+|||++.+....+.++|+||||+++|+|++
T Consensus       119 ~~i~h~dl~p~ni~~~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~  196 (284)
T cd07836         119 NRVLHRDLKPQNLLINKRG--ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMIT  196 (284)
T ss_pred             CCeeeCCCCHHHEEECCCC--cEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  699999999875433221 2234578899999998765444455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc--------------cccCCC---------CCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV--------------HYSIPG---------YVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~--------------~~~~~~---------~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |..||.+.................              ....+.         .+..+..+++++.+||+.+|.+||++.
T Consensus       197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~  276 (284)
T cd07836         197 GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAH  276 (284)
T ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHH
Confidence            999998766544433332211000              000000         123577899999999999999999999


Q ss_pred             HHhcCccc
Q 027327          137 EIQKHPWF  144 (225)
Q Consensus       137 eil~hp~~  144 (225)
                      ++++||||
T Consensus       277 ~~l~~~~f  284 (284)
T cd07836         277 DALQHPWF  284 (284)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.7e-26  Score=182.44  Aligned_cols=141  Identities=29%  Similarity=0.506  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||+|+||+++.++  .++|+|||++........ .....|+..|+|||.+.+....+.++|+||||+++|+|++
T Consensus       120 ~~i~H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~  197 (277)
T cd06917         120 VGVIHRDIKAANILVTNTG--NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT  197 (277)
T ss_pred             CCcccCCcCHHHEEEcCCC--CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHh
Confidence            4899999999999998766  799999999876543332 2234688899999998755443445999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||.........    ..+............++.++.+|+.+||..+|.+||++.++++|+||++.
T Consensus       198 g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~  261 (277)
T cd06917         198 GNPPYSDVDAFRAM----MLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH  261 (277)
T ss_pred             CCCCCCCCChhhhh----hccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence            99999764432211    11111111111111367899999999999999999999999999999764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=1e-26  Score=194.64  Aligned_cols=137  Identities=26%  Similarity=0.505  Sum_probs=109.7

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAY   82 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~   82 (225)
                      |||||||.+||+|+++. +.|||+|+|+|...... ..+..+|||.|||||+.. ..|+.. +||||||+.|+||+|+.+
T Consensus       166 IIHRDLKCDNIFinG~~-G~VKIGDLGLAtl~r~s-~aksvIGTPEFMAPEmYE-E~YnE~-VDVYaFGMCmLEMvT~eY  241 (632)
T KOG0584|consen  166 IIHRDLKCDNIFVNGNL-GEVKIGDLGLATLLRKS-HAKSVIGTPEFMAPEMYE-ENYNEL-VDVYAFGMCMLEMVTSEY  241 (632)
T ss_pred             ccccccccceEEEcCCc-CceeecchhHHHHhhcc-ccceeccCccccChHHHh-hhcchh-hhhhhhhHHHHHHHhccC
Confidence            89999999999998764 37999999999865433 334478999999999996 778766 999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           83 PFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        83 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ||.....+.   ++.+++.....+.....--.+++++||.+||.. ...|+|+.++|+||||...
T Consensus       242 PYsEC~n~A---QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  242 PYSECTNPA---QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             ChhhhCCHH---HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence            998766654   444444444332222222367999999999999 9999999999999999875

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=8.6e-26  Score=183.18  Aligned_cols=139  Identities=29%  Similarity=0.396  Sum_probs=104.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||+|+||+++.++  .+||+|||++......   ....+++.|+|||++.+   ..++. ++||||||+++|+|
T Consensus       134 ~~i~H~dl~p~nIl~~~~~--~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~-~sDv~s~G~il~el  207 (307)
T cd06607         134 HERIHRDIKAGNILLTEPG--TVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIEL  207 (307)
T ss_pred             CCceecCCCcccEEECCCC--CEEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCc-ccchHHHHHHHHHH
Confidence            4799999999999998776  7999999998654322   33467889999998742   33444 49999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ++|..||...........    +............++..+++||.+||..+|.+||++.+++.||||....+
T Consensus       208 ~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  275 (307)
T cd06607         208 AERKPPLFNMNAMSALYH----IAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP  275 (307)
T ss_pred             HcCCCCCCCccHHHHHHH----HhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence            999999976543222211    11111111112246789999999999999999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=4.4e-26  Score=182.80  Aligned_cols=138  Identities=29%  Similarity=0.408  Sum_probs=102.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccC-----CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~il   74 (225)
                      .+|+||||||+||+++.++  .+||+|||+++...... ......|++.|+|||++..     ..++ .++|+||+||++
T Consensus       143 ~~i~H~dlkp~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~~Dv~slGvi~  219 (286)
T cd06638         143 NKTIHRDVKGNNILLTTEG--GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYD-ARCDVWSLGITA  219 (286)
T ss_pred             CCccccCCCHHhEEECCCC--CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhcccccc-chhhhhhHHHHH
Confidence            4799999999999998776  69999999987543322 2233468999999999853     2344 448999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+|++|+.||.............   ............++..+.+|+.+||..+|.+|||+.++++|+||
T Consensus       220 ~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         220 IELGDGDPPLADLHPMRALFKIP---RNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHhcCCCCCCCCchhHHHhhcc---ccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            99999999997654322221111   11111111222367789999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=6.2e-26  Score=186.12  Aligned_cols=145  Identities=26%  Similarity=0.345  Sum_probs=106.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---------------CCCCCcccCCCCCccccccCCccCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---------------SQPKSTVGTPAYIAPEVLSRKEYDGKIA   65 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---------------~~~~~~~g~~~y~aPE~l~~~~~~~~~~   65 (225)
                      +||+||||||+||+++.++  .+||+|||++......               .......+++.|+|||.+.+....+.++
T Consensus       138 ~~i~H~dl~~~nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  215 (335)
T PTZ00024        138 WYFMHRDLSPANIFINSKG--ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAV  215 (335)
T ss_pred             CCeecccccHHHeEECCCC--CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHH
Confidence            4899999999999998776  7999999998754311               1112234678899999987655434559


Q ss_pred             cHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhccccc-CC---------------------CCCCCCHHHHHHHHh
Q 027327           66 DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IP---------------------GYVRVSLECRHLLSR  123 (225)
Q Consensus        66 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~---------------------~~~~~~~~~~~li~~  123 (225)
                      |+|||||++|+|++|..||........+..+.......... ++                     .....+..+.+||.+
T Consensus       216 Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  295 (335)
T PTZ00024        216 DMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQS  295 (335)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHH
Confidence            99999999999999999998766544433333221111000 00                     012357789999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCcC
Q 027327          124 IFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       124 ~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ||..+|.+|||+++++.||||...
T Consensus       296 ~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        296 LLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             HcCCCchhccCHHHHhcCcccCCC
Confidence            999999999999999999999865

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.6e-26  Score=182.60  Aligned_cols=138  Identities=28%  Similarity=0.433  Sum_probs=102.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCC-----ccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRK-----EYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~-----~~~~~~~DiwslG~il   74 (225)
                      .|++||||+|+||+++.++  .+||+|||++....... ......++..|+|||++...     .++ .++|+|||||++
T Consensus       132 ~~i~H~~l~p~ni~~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~~Dv~slG~il  208 (275)
T cd06608         132 NKVIHRDIKGQNILLTKNA--EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYD-ARSDVWSLGITA  208 (275)
T ss_pred             CCcccCCCCHHHEEEccCC--eEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCcc-ccccHHHhHHHH
Confidence            4899999999999998766  79999999986543222 22344688899999987532     233 348999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+|++|..||..............   ...........++..+++||++||..||.+|||+.++++|||+
T Consensus       209 ~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         209 IELADGKPPLCDMHPMRALFKIPR---NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHhCCCCccccchHHHHHHhhc---cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            999999999975443332222211   1111222222367899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.93  E-value=6.8e-26  Score=183.01  Aligned_cols=142  Identities=27%  Similarity=0.394  Sum_probs=104.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||++........  .....++..|+|||.+.+....+.++|||||||++|+|+
T Consensus       135 ~~i~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~  212 (302)
T cd07864         135 KNFLHRDIKCSNILLNNKG--QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF  212 (302)
T ss_pred             CCeecCCCCHHHEEECCCC--cEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH
Confidence            4899999999999998776  799999999875433221  122346778999998865443345599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccc-cC-----------------------CCCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHY-SI-----------------------PGYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      +|+.||........+..+......... ..                       .....++..+.+++.+||..+|.+||+
T Consensus       213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~  292 (302)
T cd07864         213 TKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT  292 (302)
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC
Confidence            999999865544333332221111000 00                       012246889999999999999999999


Q ss_pred             HHHHhcCccc
Q 027327          135 IPEIQKHPWF  144 (225)
Q Consensus       135 ~~eil~hp~~  144 (225)
                      +.+++.||||
T Consensus       293 ~~~il~~~~~  302 (302)
T cd07864         293 AEEALNSPWL  302 (302)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.93  E-value=6e-26  Score=181.72  Aligned_cols=142  Identities=26%  Similarity=0.409  Sum_probs=104.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++|+||||+||+++.++  .+||+|||++.......  ......++..|+|||.+.+....+.++||||||+++|+|+
T Consensus       119 ~~~~h~dl~p~nil~~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~  196 (287)
T cd07840         119 NGILHRDIKGSNILINNDG--VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELF  196 (287)
T ss_pred             CCceeccCcHHHeEEcCCC--CEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHH
Confidence            4799999999999998776  79999999987654432  1223456888999998765443345599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhccc-ccCC-----------------------CCCC-CCHHHHHHHHhhcccCCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVH-YSIP-----------------------GYVR-VSLECRHLLSRIFVADPEKRI  133 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~-----------------------~~~~-~~~~~~~li~~~l~~dP~~R~  133 (225)
                      +|+.||.................... ...+                       .... ++..+.+++++||..+|.+||
T Consensus       197 t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp  276 (287)
T cd07840         197 LGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRI  276 (287)
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCc
Confidence            99999987654433333222111000 0000                       0011 378899999999999999999


Q ss_pred             CHHHHhcCccc
Q 027327          134 TIPEIQKHPWF  144 (225)
Q Consensus       134 s~~eil~hp~~  144 (225)
                      ++.++++||||
T Consensus       277 ~~~~~l~~~~~  287 (287)
T cd07840         277 SADQALQHEYF  287 (287)
T ss_pred             CHHHHhhCcCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.93  E-value=8.9e-26  Score=179.45  Aligned_cols=140  Identities=33%  Similarity=0.534  Sum_probs=101.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+||+++... ..+||+|||++........ .....+++.|+|||.+.... ..+.++|+||+|+++|+|+
T Consensus       127 ~~i~h~dl~p~nil~~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~  205 (268)
T cd06624         127 NQIVHRDIKGDNVLVNTYS-GVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMA  205 (268)
T ss_pred             CCEeecCCCHHHEEEcCCC-CeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHH
Confidence            4899999999999997532 2699999999875432222 22335788999999986543 1234599999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +|+.||.......... ............+  ..++.++++|+++||..+|.+|||+.+++.||||
T Consensus       206 ~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         206 TGKPPFIELGEPQAAM-FKVGMFKIHPEIP--ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             hCCCCCccccChhhhH-hhhhhhccCCCCC--cccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            9999997543321111 0011111111222  3478899999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.93  E-value=5.4e-26  Score=181.98  Aligned_cols=133  Identities=23%  Similarity=0.391  Sum_probs=102.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++......   ......+++.|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       143 ~~i~H~dlkp~Nil~~~~~--~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDv~slG~il~el  219 (283)
T cd05048         143 HHFVHRDLAARNCLVGEGL--TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTE-SDIWSFGVVLWEI  219 (283)
T ss_pred             CCeeccccccceEEEcCCC--cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchh-hhHHHHHHHHHHH
Confidence            4899999999999998766  79999999987543221   1223356788999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+....+    ....+.... ..+....++.++.+|+.+||+.+|.+||++.+++++
T Consensus       220 ~~~g~~p~~~~~~~~----~~~~i~~~~-~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         220 FSYGLQPYYGFSNQE----VIEMIRSRQ-LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HcCCCCCCCCCCHHH----HHHHHHcCC-cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            97 999998755432    222222222 112234588999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.93  E-value=7.8e-26  Score=179.54  Aligned_cols=142  Identities=32%  Similarity=0.459  Sum_probs=105.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +|++||||||+||+++.++. .+||+|||++........     .....++..|+|||.+.+..++.+ +|+||+|+++|
T Consensus       122 ~~i~H~~i~~~nil~~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Dv~slG~~l~  199 (268)
T cd06630         122 NQIIHRDVKGANLLIDSTGQ-RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRS-CDVWSVGCVII  199 (268)
T ss_pred             CCeecCCCCHHHEEEcCCCC-EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcc-cchHHHHHHHH
Confidence            48999999999999976542 599999999875543211     123357889999999987777655 89999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      +|++|..||.......... .................++.++.+++.+||..+|.+||++.++++||||.
T Consensus       200 ~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         200 EMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            9999999996544322222 22222222222222234788999999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.93  E-value=3.8e-26  Score=185.61  Aligned_cols=144  Identities=24%  Similarity=0.437  Sum_probs=101.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCC--ccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRK--EYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~--~~~~~~~Diwsl   70 (225)
                      .||+||||||+||+++.++  .+||+|||.+........        .....++..|+|||++...  .++. ++|+||+
T Consensus       120 ~~ivH~dlk~~Nili~~~~--~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~Diws~  196 (314)
T cd08216         120 KGFIHRSVKASHILLSGDG--KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNE-KSDIYSV  196 (314)
T ss_pred             CCeecCCCCcceEEEecCC--ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCc-chhHHHH
Confidence            4899999999999998766  799999998864322111        1233467789999998653  3444 4999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcc----------------------------cccCCCCCCCCHHHHHHHH
Q 027327           71 GVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV----------------------------HYSIPGYVRVSLECRHLLS  122 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~li~  122 (225)
                      ||++|+|++|..||...................                            ....+....++.++.+|+.
T Consensus       197 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  276 (314)
T cd08216         197 GITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVE  276 (314)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHH
Confidence            999999999999998654332222111100000                            0000001123467889999


Q ss_pred             hhcccCCCCCCCHHHHhcCcccCcC
Q 027327          123 RIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       123 ~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +||..+|.+|||+.++++||||.+.
T Consensus       277 ~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         277 LCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             HHhhcCCCcCcCHHHHhcCchHhhh
Confidence            9999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.93  E-value=6.4e-26  Score=186.92  Aligned_cols=146  Identities=26%  Similarity=0.387  Sum_probs=106.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.++  .+||+|||++.....  ......++..|+|||.+.+....+.++|+|||||++|+|++|
T Consensus       139 ~~ivH~dlkp~NIll~~~~--~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g  214 (345)
T cd07877         139 ADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  214 (345)
T ss_pred             CCeeecCCChHHEEEcCCC--CEEEecccccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999875422  223346788999999986633334459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHh-------------------cccccCC------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRIL-------------------SVHYSIP------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||........+..+.....                   ......+      .....++.+++||.+||..+|.+||++
T Consensus       215 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~  294 (345)
T cd07877         215 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA  294 (345)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCH
Confidence            999976544333222211110                   0000000      011357889999999999999999999


Q ss_pred             HHHhcCcccCcCCCc
Q 027327          136 PEIQKHPWFLKNLPI  150 (225)
Q Consensus       136 ~eil~hp~~~~~~~~  150 (225)
                      .+++.||||.+....
T Consensus       295 ~e~l~h~~f~~~~~~  309 (345)
T cd07877         295 AQALAHAYFAQYHDP  309 (345)
T ss_pred             HHHhcChhhhhcCCC
Confidence            999999999875443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.93  E-value=1.1e-25  Score=178.73  Aligned_cols=137  Identities=35%  Similarity=0.491  Sum_probs=102.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+|+||||+||+++.++  .+||+|||+++.....    .......++..|+|||++.+..++.. +|+|||||++|+
T Consensus       125 ~~i~H~dl~p~nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~e  201 (265)
T cd06652         125 NMIVHRDIKGANILRDSVG--NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRK-ADIWSVGCTVVE  201 (265)
T ss_pred             CCEecCCCCHHHEEecCCC--CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcc-hhHHHHHHHHHH
Confidence            4799999999999998766  7999999998754321    11223458889999999987766544 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      |++|+.||.........    ............+..++..+.++|++||. +|++||+++++++|||+.
T Consensus       202 l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         202 MLTEKPPWAEFEAMAAI----FKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HhhCCCCCCccchHHHH----HHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            99999999765332222    12222111111223467889999999995 999999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=1.1e-25  Score=179.79  Aligned_cols=142  Identities=30%  Similarity=0.415  Sum_probs=103.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||+|+||+++.++  .+||+|||++....... ......++..|+|||.+.+....+.++|+|||||++|+|++
T Consensus       117 ~~i~H~~l~~~ni~~~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~  194 (282)
T cd07829         117 HRILHRDLKPQNILINRDG--VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMIT  194 (282)
T ss_pred             CCcccCCCChheEEEcCCC--CEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHh
Confidence            4799999999999998766  79999999987654332 22233567789999998766333445999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc--------------cccC---------CCCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV--------------HYSI---------PGYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~--------------~~~~---------~~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||........+..+.......              ....         ...+.++..+.++|++||..+|.+||++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~  274 (282)
T cd07829         195 GKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAK  274 (282)
T ss_pred             CCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHH
Confidence            999997755443333322211000              0000         01123577899999999999999999999


Q ss_pred             HHhcCccc
Q 027327          137 EIQKHPWF  144 (225)
Q Consensus       137 eil~hp~~  144 (225)
                      +++.||||
T Consensus       275 ~~l~~p~~  282 (282)
T cd07829         275 EALKHPYF  282 (282)
T ss_pred             HHhhCcCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=8.1e-26  Score=181.61  Aligned_cols=145  Identities=30%  Similarity=0.506  Sum_probs=106.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++|+||+|.||+++.++  .++|+|||++........ ....++..|+|||.+.+..++.+ +|+|||||++|+|++|
T Consensus       124 ~~i~H~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~~l~~g  199 (287)
T cd06621         124 RKIIHRDIKPSNILLTRKG--QVKLCDFGVSGELVNSLA-GTFTGTSFYMAPERIQGKPYSIT-SDVWSLGLTLLEVAQN  199 (287)
T ss_pred             CCcccCCCCHHHEEEecCC--eEEEeecccccccccccc-ccccCCccccCHHHhcCCCCCch-hhHHHHHHHHHHHHhC
Confidence            4899999999999998766  699999999875433222 23457889999999987777655 8999999999999999


Q ss_pred             CCCCCCCCCh-hHHHHHHHHHhccc-ccCCC----CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           81 AYPFEDPEDP-RNFKTTIQRILSVH-YSIPG----YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        81 ~~pf~~~~~~-~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ..||...... .........+.... ...+.    ...+++.+++||.+||..+|.+|||+.++++||||++...
T Consensus       200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         200 RFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             CCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence            9999765220 01111222222211 11111    1235678999999999999999999999999999965433

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.93  E-value=2.8e-26  Score=182.21  Aligned_cols=139  Identities=24%  Similarity=0.360  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++........ .....+++.|+|||.+..   ..++ .++|+||+||++|+
T Consensus       125 ~~i~H~dl~p~nill~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~-~~~Dvws~G~il~e  201 (267)
T cd06646         125 KGKMHRDIKGANILLTDNG--DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYN-QLCDIWAVGITAIE  201 (267)
T ss_pred             CCccccCCCHHHEEECCCC--CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCc-chhhHHHHHHHHHH
Confidence            4899999999999998766  699999999875533222 233468889999998842   3344 45899999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      |++|+.||................. .....+....++..+.+||++||..+|++|||++++++|+|
T Consensus       202 l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         202 LAELQPPMFDLHPMRALFLMSKSNF-QPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHhCCCCccccchhhhheeeecCCC-CCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            9999999965432211111100000 01111122347889999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=7.6e-26  Score=178.80  Aligned_cols=138  Identities=32%  Similarity=0.502  Sum_probs=107.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|++|+||+|+||+++.++  .++|+|||++.............++..|+|||++.+..++.+ +|+||||+++|+|++|
T Consensus       119 ~~i~h~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~~l~~g  195 (258)
T cd05578         119 KGIIHRDIKPDNILLDEQG--HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVA-VDWWSLGVTAYECLRG  195 (258)
T ss_pred             CCeeccCCCHHHeEEcCCC--CEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCc-ccchhhHHHHHHHHhC
Confidence            4799999999999998776  799999999876554434444568889999999987776555 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH--HHHhcCccc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI--PEIQKHPWF  144 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~--~eil~hp~~  144 (225)
                      ..||...... ..............  .....++..+.++|.+||..+|.+||++  .++++||||
T Consensus       196 ~~p~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         196 KRPYRGHSRT-IRDQIRAKQETADV--LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             CCCCCCCCcc-HHHHHHHHhccccc--cCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            9999865532 11222222221222  2223578999999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.93  E-value=1.1e-25  Score=184.88  Aligned_cols=134  Identities=26%  Similarity=0.420  Sum_probs=101.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....++..|+|||++.+..++.+ +|||||||++|+|
T Consensus       192 ~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~SlGv~l~el  268 (337)
T cd05054         192 RKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQ-SDVWSFGVLLWEI  268 (337)
T ss_pred             CCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCcc-ccHHHHHHHHHHH
Confidence            4899999999999998766  799999999975432211   122345678999999988888766 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+......+...+...    ........++.++.+++.+||+.+|++||++.++++|
T Consensus       269 ~t~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         269 FSLGASPYPGVQIDEEFCRRLKEG----TRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HHcCCCCCCCCCccHHHHHHHhcc----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            97 999997654433333222211    1112223578899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=2.9e-26  Score=207.19  Aligned_cols=139  Identities=15%  Similarity=0.219  Sum_probs=97.1

Q ss_pred             CceEecCCCCCcEEEcCC-----------------CCCCEEEecCCCccCCCCCC-----------------CCCCcccC
Q 027327            1 MQICHRDLKLENTLLDGS-----------------KAPRLKICDFGYSKSSVLHS-----------------QPKSTVGT   46 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-----------------~~~~vkl~Dfg~a~~~~~~~-----------------~~~~~~g~   46 (225)
                      +|||||||||+||||+..                 ....+|++|||+++......                 .....+||
T Consensus        99 ~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  178 (793)
T PLN00181         99 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM  178 (793)
T ss_pred             CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence            589999999999999532                 22257788888776421100                 00123588


Q ss_pred             CCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcc
Q 027327           47 PAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFV  126 (225)
Q Consensus        47 ~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  126 (225)
                      ++|||||++.+..|..+ +|||||||++|||++|..|+....  ............     +......+....++.+||.
T Consensus       179 ~~Y~APE~~~~~~~~~~-sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~L~  250 (793)
T PLN00181        179 SWYTSPEEDNGSSSNCA-SDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLP-----PQILLNWPKEASFCLWLLH  250 (793)
T ss_pred             cceEChhhhccCCCCch-hhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcC-----hhhhhcCHHHHHHHHHhCC
Confidence            99999999988888655 999999999999999988875321  111111111111     1111224567899999999


Q ss_pred             cCCCCCCCHHHHhcCcccCcC
Q 027327          127 ADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       127 ~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++|.+||++.++++||||.+.
T Consensus       251 ~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        251 PEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             CChhhCcChHHHhhchhhhhh
Confidence            999999999999999999753

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=6e-26  Score=179.13  Aligned_cols=136  Identities=28%  Similarity=0.544  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++|+||+|+||+++.++  .++|+|||++........ .....+++.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       120 ~~i~h~~l~~~nil~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slG~i~~~l~~  196 (256)
T cd08218         120 RKILHRDIKSQNIFLTKDG--TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNK-SDIWALGCVLYEMCT  196 (256)
T ss_pred             CCEecCCCCHHHEEEcCCC--CEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCc-cchhHHHHHHHHHHc
Confidence            4899999999999998766  699999999875433222 123457889999999987776555 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..||.......    ....+...... +....++.++.++|.+||+.+|.+||++.++++||||
T Consensus       197 g~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         197 LKHAFEAGNMKN----LVLKIIRGSYP-PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             CCCCccCCCHHH----HHHHHhcCCCC-CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            999997644332    22222222221 2233578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.93  E-value=1.3e-25  Score=177.17  Aligned_cols=137  Identities=32%  Similarity=0.476  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+|+||+|+||+++.++  .+||+|||++.............++..|+|||.+.... ++ .++|+||||+++|+|++
T Consensus       121 ~~i~H~dl~~~ni~~~~~~--~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~-~~~D~~slG~~l~~l~~  197 (258)
T cd06632         121 RNTVHRDIKGANILVDTNG--VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYG-LAADIWSLGCTVLEMAT  197 (258)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCC-chhhhHHHHHHHHHHHh
Confidence            4799999999999998766  79999999987654443334556889999999987655 54 44999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |+.||..........    .+............++..+++|+++||..+|.+||++.+++.|||+
T Consensus       198 g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         198 GKPPWSQLEGVAAVF----KIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             CCCCcccCcHHHHHH----HHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            999997654322211    1111111111123478899999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.93  E-value=1.6e-25  Score=176.74  Aligned_cols=136  Identities=32%  Similarity=0.493  Sum_probs=106.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++||||+|+||+++.++  .+||+|||++....... ......+++.|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       120 ~~i~h~dl~p~ni~~~~~~--~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~-~Dv~slG~i~~~l~~  196 (256)
T cd08221         120 AGILHRDIKTLNIFLTKAG--LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFK-SDIWALGCVLYELLT  196 (256)
T ss_pred             CCccccCCChHhEEEeCCC--CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCc-chhHHHHHHHHHHHH
Confidence            4799999999999998766  79999999987553333 2234568999999999987766555 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..||.......    ....+...... +....++.++.+++.+||..+|.+||++.++++|+|+
T Consensus       197 g~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         197 LKRTFDATNPLN----LVVKIVQGNYT-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCC-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            999997644332    22223322222 1224578899999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.93  E-value=1.4e-25  Score=181.82  Aligned_cols=140  Identities=34%  Similarity=0.590  Sum_probs=104.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----------------CCCCcccCCCCCccccccCCccCCCc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----------------QPKSTVGTPAYIAPEVLSRKEYDGKI   64 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----------------~~~~~~g~~~y~aPE~l~~~~~~~~~   64 (225)
                      .||+||||||+||+++.++  .+||+|||+++......                ......++..|+|||.+.+..++.+ 
T Consensus       120 ~~i~H~dl~p~NIll~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-  196 (305)
T cd05609         120 YGIVHRDLKPDNLLITSMG--HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKP-  196 (305)
T ss_pred             CCccccCCchHHEEECCCC--CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCch-
Confidence            4899999999999998766  79999999986321100                0012346788999999987777655 


Q ss_pred             ccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCC-CCCCCHHHHHHHHhhcccCCCCCCC---HHHHhc
Q 027327           65 ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG-YVRVSLECRHLLSRIFVADPEKRIT---IPEIQK  140 (225)
Q Consensus        65 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~s---~~eil~  140 (225)
                      +|+|||||++|+|++|..||.+....    .............+. ...++.+++++|.+||+.+|.+||+   +.++++
T Consensus       197 ~Di~slG~vl~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         197 VDWWAMGIILYEFLVGCVPFFGDTPE----ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence            99999999999999999999765432    222222222222222 1247889999999999999999998   789999


Q ss_pred             CcccCcC
Q 027327          141 HPWFLKN  147 (225)
Q Consensus       141 hp~~~~~  147 (225)
                      ||||...
T Consensus       273 ~~~~~~~  279 (305)
T cd05609         273 HRFFLGL  279 (305)
T ss_pred             CccccCC
Confidence            9999653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-26  Score=200.51  Aligned_cols=132  Identities=30%  Similarity=0.566  Sum_probs=107.2

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC----------CcccCCCCCcccccc---CCccCCCcccHHH
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK----------STVGTPAYIAPEVLS---RKEYDGKIADVWS   69 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~----------~~~g~~~y~aPE~l~---~~~~~~~~~Diws   69 (225)
                      |||||||-+||||+.++  +.||||||.|..........          ...-|+.|+|||++.   +.+.. .++|||+
T Consensus       167 iIHRDLKiENvLls~~g--~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~-eKsDIWA  243 (738)
T KOG1989|consen  167 IIHRDLKIENVLLSADG--NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIG-EKSDIWA  243 (738)
T ss_pred             cchhhhhhhheEEcCCC--CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCc-chhHHHH
Confidence            89999999999998877  79999999987433222111          224689999999973   44454 4499999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      |||+||.|+....||.....        ..|+...|.+|.+++++..+.+||+.||+.||.+||++.+++.+-+-.
T Consensus       244 LGclLYkLCy~t~PFe~sg~--------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  244 LGCLLYKLCYFTTPFEESGK--------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             HHHHHHHHHHhCCCcCcCcc--------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence            99999999999999986433        235677889999889999999999999999999999999988765544

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.93  E-value=1.1e-25  Score=187.39  Aligned_cols=133  Identities=24%  Similarity=0.397  Sum_probs=99.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++........   ....++..|+|||++.+..++.+ +|||||||++|+|
T Consensus       231 ~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwSlGvil~el  307 (374)
T cd05106         231 KNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEI  307 (374)
T ss_pred             CCEEeccCchheEEEeCCC--eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCcc-ccHHHHHHHHHHH
Confidence            4899999999999998666  7999999998754332211   12234567999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |+.||.............    ...........++.++.+++.+||+.+|.+|||+.++++
T Consensus       308 lt~G~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         308 FSLGKSPYPGILVNSKFYKMV----KRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HhCCCCCCccccccHHHHHHH----HcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            97 999997654433222222    222222222346899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=1.2e-25  Score=181.16  Aligned_cols=143  Identities=34%  Similarity=0.586  Sum_probs=108.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++||||+|+||+++.++  .++|+|||++....... ......+++.|+|||.+.+..++.+ +|+||+|+++|+|++
T Consensus       135 ~givH~dl~p~Nilv~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slGvil~el~t  211 (292)
T cd06657         135 QGVIHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPE-VDIWSLGIMVIEMVD  211 (292)
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEcccccceecccccccccccccCccccCHHHhcCCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  69999999876543222 1223458889999999877666544 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |..||.......... .......  ........++..+.+++.+||..+|.+||++.++++||||.+...
T Consensus       212 g~~p~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         212 GEPPYFNEPPLKAMK-MIRDNLP--PKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             CCCCCCCCCHHHHHH-HHHhhCC--cccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence            999997644332221 1211111  122223357889999999999999999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=1.4e-25  Score=176.57  Aligned_cols=138  Identities=33%  Similarity=0.503  Sum_probs=106.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++|+||+|+||+++.++  .++|+|||.+........   .....++..|+|||.+.+..++.+ +|+||||+++|+|
T Consensus       120 ~~~~h~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~~l  196 (260)
T cd06606         120 NGIVHRDIKGANILVDSDG--VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRA-ADIWSLGCTVIEM  196 (260)
T ss_pred             CCccccCCCHHHEEEcCCC--CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998766  799999999876555443   344568889999999987766555 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      ++|..||......   ......+............++..+++|+.+||..+|.+||++.++++||||
T Consensus       197 ~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         197 ATGKPPWSELGNP---MAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HhCCCCCCCCCch---HHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            9999999765521   122222221111112223468899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=1.3e-25  Score=177.62  Aligned_cols=139  Identities=42%  Similarity=0.663  Sum_probs=107.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---------CCCCcccCCCCCccccccCCccCCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG   71 (225)
                      .|++||||+|+||+++.++  .++|+|||++.......         ......++..|+|||.+....++.+ +|+||||
T Consensus       112 ~~i~H~di~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~Dv~slG  188 (265)
T cd05579         112 NGIIHRDLKPDNILIDSNG--HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKT-VDWWSLG  188 (265)
T ss_pred             cCeecCCCCHHHeEEcCCC--CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcc-hhhHHHH
Confidence            4899999999999998776  79999999987543321         1123357888999999877766544 9999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH---HHHhcCcccCc
Q 027327           72 VTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI---PEIQKHPWFLK  146 (225)
Q Consensus        72 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~---~eil~hp~~~~  146 (225)
                      +++|++++|..||......    .....+.......+....++..+.+|+.+||+.+|.+|||+   .++++||||..
T Consensus       189 ~~~~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         189 CILYEFLVGIPPFHGETPE----EIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             HHHHHHHhCCCCCCCCCHH----HHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence            9999999999999765432    22233333333334433458999999999999999999999   99999999964

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.93  E-value=4.6e-27  Score=201.86  Aligned_cols=140  Identities=31%  Similarity=0.508  Sum_probs=104.6

Q ss_pred             CceEecCCCCCcEEEcC---CCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG---SKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~---~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~i   73 (225)
                      ++||||||||.||||..   .+...++|+|||+++.......    .....||-+|+|||++....... ++||+||||+
T Consensus       625 l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~-avDiFslGCv  703 (903)
T KOG1027|consen  625 LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQ-AVDIFSLGCV  703 (903)
T ss_pred             cccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCc-ccchhhcCce
Confidence            48999999999999975   3444799999999987654433    23346999999999998766554 4999999999


Q ss_pred             HHHHHhC-CCCCCCCCChhHHHHHHHHHhcccccCCCCCC-CCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           74 LYVMLVG-AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        74 l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|+.++| ..||......      ...+....+..-.... -..++++||.+|++++|..||+|.++|.||+|...
T Consensus       704 fyYvltgG~HpFGd~~~R------~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  704 FYYVLTGGSHPFGDSLER------QANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             EEEEecCCccCCCchHHh------hhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            9999886 8999653321      1223333322211110 11289999999999999999999999999999753

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.93  E-value=2.9e-25  Score=180.61  Aligned_cols=138  Identities=25%  Similarity=0.368  Sum_probs=104.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||+|+||+++.++  .+||+|||++....   ......++..|+|||++..   ..++ .++|+|||||++|+|
T Consensus       140 ~gi~H~dl~p~nili~~~~--~~kL~dfg~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~-~~sDv~slGvil~el  213 (313)
T cd06633         140 HNMIHRDIKAGNILLTEPG--QVKLADFGSASKSS---PANSFVGTPYWMAPEVILAMDEGQYD-GKVDVWSLGITCIEL  213 (313)
T ss_pred             CCeecCCCChhhEEECCCC--CEEEeecCCCcccC---CCCCccccccccChhhccccCCCCCC-chhhHHHHHHHHHHH
Confidence            4899999999999998766  69999999986432   2234568889999999842   3344 448999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      ++|..||............    ............++..+++|+.+||+++|.+||++.+++.||||....
T Consensus       214 ~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         214 AERKPPLFNMNAMSALYHI----AQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             HhCCCCCCCCChHHHHHHH----HhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            9999999765443322222    111111112234678899999999999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.93  E-value=9.7e-26  Score=180.19  Aligned_cols=139  Identities=31%  Similarity=0.425  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++|+||+|+||+++.++  .++|+|||++........ .....++..|+|||.+.+..++.+ +|+|||||++|+|++
T Consensus       120 ~~ivH~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Dv~slG~il~el~t  196 (277)
T cd06640         120 EKKIHRDIKAANVLLSEQG--DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK-ADIWSLGITAIELAK  196 (277)
T ss_pred             CCccCcCCChhhEEEcCCC--CEEEcccccceeccCCccccccccCcccccCHhHhccCCCccH-HHHHHHHHHHHHHHH
Confidence            4799999999999998766  699999999875433222 223357889999999987776555 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||..........    .+... ........++..+.+|+.+||..+|.+||++.++++|+||.+.
T Consensus       197 g~~p~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         197 GEPPNSDMHPMRVLF----LIPKN-NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             CCCCCCCcChHhHhh----hhhcC-CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence            999997654322111    11111 1111122467889999999999999999999999999999654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.93  E-value=1.3e-25  Score=181.25  Aligned_cols=133  Identities=25%  Similarity=0.364  Sum_probs=99.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      .||+||||||+|||++.++  .+||+|||++..............+..|+|||++.+..++.+ +|||||||++|+|++ 
T Consensus       138 ~~ivH~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwSlG~il~el~t~  214 (297)
T cd05089         138 KQFIHRDLAARNVLVGENL--ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTK-SDVWSFGVLLWEIVSL  214 (297)
T ss_pred             CCcccCcCCcceEEECCCC--eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCch-hhHHHHHHHHHHHHcC
Confidence            4899999999999998766  699999999864322211112223457999999987777655 999999999999997 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |..||.........    ..+... ...+....++..+++|+.+||..+|.+|||+.++++.
T Consensus       215 g~~pf~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         215 GGTPYCGMTCAELY----EKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCCCCCCHHHHH----HHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999765543322    222221 2222233578999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=1.1e-25  Score=181.49  Aligned_cols=142  Identities=30%  Similarity=0.482  Sum_probs=107.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|++||||||+||+++.++  .+||+|||++........ .....+++.|+|||.+....++.+ +|+||||+++|++++
T Consensus       134 ~gi~H~dL~p~Nili~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Dv~slG~ll~~ll~  210 (293)
T cd06647         134 NQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMVE  210 (293)
T ss_pred             CCEeeccCCHHHEEEcCCC--CEEEccCcceecccccccccccccCChhhcCchhhccCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998766  799999998865433322 223458889999999987776555 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |+.||............   ........+....++..+++|+++||..+|.+||++.+++.|+||....
T Consensus       211 g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         211 GEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             CCCCCCCCChhhheeeh---hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence            99999765432211111   1111122222334678899999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.93  E-value=1.6e-26  Score=174.30  Aligned_cols=135  Identities=30%  Similarity=0.447  Sum_probs=99.8

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC----------CcccCCCCCccccccCCccC--CCcccHHHH
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK----------STVGTPAYIAPEVLSRKEYD--GKIADVWSC   70 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~----------~~~g~~~y~aPE~l~~~~~~--~~~~Diwsl   70 (225)
                      ..||||||.|||+..++  ..+|.|||.+......-...          ....|..|+|||.+.-+.+.  +.++|||||
T Consensus       150 yAH~DiKP~NILls~~~--~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSL  227 (302)
T KOG2345|consen  150 YAHRDIKPANILLSDSG--LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSL  227 (302)
T ss_pred             ccccCCCcceeEecCCC--ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhh
Confidence            68999999999998765  79999999987543221111          12368899999998533322  344999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           71 GVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ||++|.|+.|..||.....  .-....-.+....+.+|....+|..+.+||+.||+.||.+||++.+++.+
T Consensus       228 GCtLYa~mf~~sPfe~~~~--~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  228 GCTLYAMMFGESPFERIYQ--QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             hHHHHHHHHcCCcchHHhh--cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            9999999999999963211  00011112234556677777799999999999999999999999999864

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=2.5e-25  Score=178.84  Aligned_cols=143  Identities=35%  Similarity=0.575  Sum_probs=107.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+|||++.++  .+||+|||++.......  ......++..|+|||.+.... ....++|+||||+++|+|
T Consensus       124 ~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~l  201 (290)
T cd05613         124 LGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYEL  201 (290)
T ss_pred             CCeeccCCCHHHeEECCCC--CEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHH
Confidence            4899999999999998766  79999999987543322  122346888999999986532 223448999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      ++|..||...............+.......+  ..++..+.+|+++||..+|.+||     ++.+++.||||.+.
T Consensus       202 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  274 (290)
T cd05613         202 LTGASPFTVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI  274 (290)
T ss_pred             hcCCCCCCcCCccccHHHHHHHhhccCCCCC--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence            9999999754433333333333333333222  34788999999999999999997     89999999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.93  E-value=2.9e-25  Score=177.41  Aligned_cols=132  Identities=24%  Similarity=0.392  Sum_probs=100.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|++||||||+||+++.++  .+||+|||++........   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       141 ~~i~h~dlkp~nili~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~e~  217 (280)
T cd05049         141 QHFVHRDLATRNCLVGYDL--VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSFGVVLWEI  217 (280)
T ss_pred             CCeeccccccceEEEcCCC--eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchh-hhHHHHHHHHHHH
Confidence            4899999999999998776  799999999874322211   123345778999999988887655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||.........    ..+...... .....++..+++|+.+||..+|.+||++.++++
T Consensus       218 ~~~g~~p~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         218 FTYGKQPWYGLSNEEVI----ECITQGRLL-QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HhcCCCCCCCCCHHHHH----HHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            98 99999765543322    222222222 222357899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.93  E-value=1.2e-25  Score=179.61  Aligned_cols=139  Identities=29%  Similarity=0.389  Sum_probs=105.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++|+||+|+||+++.++  .++|+|||++........ .....++..|+|||.+.+..++.+ +|+|||||++|+|++
T Consensus       120 ~~ivH~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~t  196 (277)
T cd06642         120 ERKIHRDIKAANVLLSEQG--DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFK-ADIWSLGITAIELAK  196 (277)
T ss_pred             CCeeccCCChheEEEeCCC--CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchh-hhHHHHHHHHHHHHh
Confidence            4899999999999998766  699999999875443222 123357889999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+.||..........    .+.... .......++..+.+++.+||..+|.+||++.++++||||.+.
T Consensus       197 g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         197 GEPPNSDLHPMRVLF----LIPKNS-PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             CCCCCcccchhhHHh----hhhcCC-CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence            999997543322111    111111 111122467889999999999999999999999999999653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.93  E-value=1.2e-25  Score=175.84  Aligned_cols=129  Identities=29%  Similarity=0.390  Sum_probs=99.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+||+++.++  .++++|||.+......  .....++..|+|||.+.+..++.+ +|+||+|+++|+|++|
T Consensus       104 ~~i~H~dlkp~Nil~~~~~--~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~g  178 (237)
T cd05576         104 EGIVCRDLNPNNILLDDRG--HIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGGISEETEA-CDWWSLGAILFELLTG  178 (237)
T ss_pred             CCeeccCCCHHHEEEcCCC--CEEEecccchhccccc--cccCCcCccccCCcccCCCCCCch-hhHHHHHHHHHHHHHC
Confidence            4899999999999998776  6999999987654322  223346778999999877766554 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-----HHHhcCccc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-----PEIQKHPWF  144 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-----~eil~hp~~  144 (225)
                      +.||.......      .  .......|  ..++..+++||.+||+.||.+|+++     +++++||||
T Consensus       179 ~~~~~~~~~~~------~--~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         179 KTLVECHPSGI------N--THTTLNIP--EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             cchhhcCchhc------c--cccccCCc--ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            98875422110      0  00111222  3478899999999999999999986     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.93  E-value=5.4e-26  Score=186.06  Aligned_cols=144  Identities=22%  Similarity=0.372  Sum_probs=98.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCC--ccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRK--EYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~--~~~~~~~Diwsl   70 (225)
                      .||+||||||+|||++.++  .+|++||+.+........        .....++..|+|||++.+.  .++ .++|+|||
T Consensus       120 ~~ivHrDlkp~Nill~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~~~Diwsl  196 (328)
T cd08226         120 NGYIHRNIKASHILISGDG--LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYN-VKSDIYSV  196 (328)
T ss_pred             CCeecCCCCHHHEEEeCCC--cEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCC-chhhHHHH
Confidence            4899999999999998766  799999986432211111        0112345679999998764  243 45999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChhHHHHHHHHHh-----------------------------------------cccccCCC
Q 027327           71 GVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL-----------------------------------------SVHYSIPG  109 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~  109 (225)
                      ||++|+|++|..||.................                                         ......+.
T Consensus       197 G~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (328)
T cd08226         197 GITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPS  276 (328)
T ss_pred             HHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchh
Confidence            9999999999999976543222211110000                                         00000111


Q ss_pred             CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          110 YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       110 ~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ...++..+.+|+++||..||.+|||+.++++||||.+.
T Consensus       277 ~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         277 SKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             hhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence            12356788999999999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.93  E-value=2.7e-25  Score=180.46  Aligned_cols=139  Identities=28%  Similarity=0.382  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+||+++.++  .+||+|||++.....   .....+++.|+|||.+.+   ..++. ++|||||||++|+|
T Consensus       134 ~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~-~~Di~slG~il~el  207 (308)
T cd06634         134 HNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIEL  207 (308)
T ss_pred             CCcccCCCCHHhEEECCCC--cEEECCcccceeecC---cccccCCccccCHHHHhhcccCCCCc-ccchHHHHHHHHHH
Confidence            4799999999999998766  799999999875432   233467889999999742   33444 49999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ++|..||...........    +............++..+++||++||..+|.+||++.++++|||+....+
T Consensus       208 ~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~  275 (308)
T cd06634         208 AERKPPLFNMNAMSALYH----IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP  275 (308)
T ss_pred             HcCCCCCccccHHHHHHH----HhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence            999999976443222221    11111111122357889999999999999999999999999999987544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=2.4e-25  Score=175.58  Aligned_cols=137  Identities=31%  Similarity=0.522  Sum_probs=104.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+|+||||+||+++.++. .+||+|||.+......... ....|++.|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       120 ~~i~H~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~-~Dv~slG~il~~l~~  197 (257)
T cd08225         120 RKILHRDIKSQNIFLSKNGM-VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNK-TDIWSLGCVLYELCT  197 (257)
T ss_pred             CCcccccCCHHHEEEcCCCC-eEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCch-hhHHHHHHHHHHHHh
Confidence            47999999999999986643 4799999998755433221 23358889999999877776655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..||.......    .......... .+....++..++++|.+||..+|.+|||+.++++||||
T Consensus       198 g~~p~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         198 LKHPFEGNNLHQ----LVLKICQGYF-APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             CCCCCCCccHHH----HHHHHhcccC-CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            999997644322    2222222221 12223578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.93  E-value=2.3e-25  Score=178.46  Aligned_cols=133  Identities=20%  Similarity=0.331  Sum_probs=100.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++.......   .....+++.|+|||.+.+..++.+ +|||||||++|+|
T Consensus       143 ~gi~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el  219 (283)
T cd05091         143 HHVVHKDLATRNVLVFDKL--NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSID-SDIWSYGVVLWEV  219 (283)
T ss_pred             cCccccccchhheEecCCC--ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcc-hhHHHHHHHHHHH
Confidence            4899999999999998766  699999999875433221   123345778999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+....    .....+..... .+....++..+.+|+.+||+.+|.+||++.+|++.
T Consensus       220 ~~~g~~p~~~~~~~----~~~~~i~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         220 FSYGLQPYCGYSNQ----DVIEMIRNRQV-LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HcCCCCCCCCCCHH----HHHHHHHcCCc-CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            98 88898765442    22333333222 12234588899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.93  E-value=4.4e-25  Score=174.51  Aligned_cols=133  Identities=25%  Similarity=0.336  Sum_probs=99.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +||+||||||.||+++.++  .+||+|||+++........    ....++..|+|||.+....++.+ +|+|||||++|+
T Consensus       114 ~~i~H~dlkp~nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~e  190 (257)
T cd05116         114 TNFVHRDLAARNVLLVTQH--YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSK-SDVWSFGVLMWE  190 (257)
T ss_pred             CCEeecccchhhEEEcCCC--eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCch-hHHHHHHHHHHH
Confidence            4899999999999998766  7999999998754333221    12234578999999876666544 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++ |..||.......    ....+.... ..+.+..++.++.+||.+||+.+|++||++.+|.+.
T Consensus       191 l~t~g~~p~~~~~~~~----~~~~i~~~~-~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~  251 (257)
T cd05116         191 AFSYGQKPYKGMKGNE----VTQMIESGE-RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR  251 (257)
T ss_pred             HHhCCCCCCCCCCHHH----HHHHHHCCC-CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence            997 999997654322    222222221 222334588999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.93  E-value=2.1e-25  Score=181.58  Aligned_cols=133  Identities=23%  Similarity=0.414  Sum_probs=101.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC---CcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~---~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++.........   ...++..|+|||.+.+..++.+ +|||||||++|+|
T Consensus       128 ~~iiH~dlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slGv~l~el  204 (316)
T cd05108         128 RRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQ-SDVWSYGVTVWEL  204 (316)
T ss_pred             cCeeccccchhheEecCCC--cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCch-hhhHHHHHHHHHH
Confidence            4899999999999998766  69999999998654332221   1234567999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+.... .+..    +.......+....++..+.+++.+||..+|.+||++.+++.+
T Consensus       205 ~t~g~~p~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         205 MTFGSKPYDGIPAS-EISS----ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HcCCCCCCCCCCHH-HHHH----HHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            97 99999764332 2222    222233334444578899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.93  E-value=1.8e-25  Score=176.01  Aligned_cols=136  Identities=36%  Similarity=0.555  Sum_probs=106.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++|+||+|+||+++.++  .++|+|||++....... ......+++.|+|||.+.+..++.+ +|+||+|+++++|++
T Consensus       122 ~~~~H~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~~~~~l~~  198 (258)
T cd08215         122 RKILHRDIKPQNIFLTSNG--LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYK-SDIWSLGCVLYELCT  198 (258)
T ss_pred             CCEecccCChHHeEEcCCC--cEEECCccceeecccCcceecceeeeecccChhHhccCCCCcc-ccHHHHHHHHHHHHc
Confidence            4899999999999998766  79999999987654433 2233468889999999887777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..||......    ........... .+....++..+.+++.+||..+|.+|||+.++++||||
T Consensus       199 g~~p~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         199 LKHPFEGENLL----ELALKILKGQY-PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCCCCCCCcHH----HHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            99999765432    22222222221 12223578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=5e-25  Score=173.10  Aligned_cols=135  Identities=42%  Similarity=0.665  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++|+||+|.||+++.++  .++|+|||++...... .......++..|+|||.+.+...+.. +|+||||+++|++++
T Consensus       112 ~~~~H~~l~p~ni~~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~D~~slG~~~~~l~~  188 (250)
T cd05123         112 LGIIYRDLKPENILLDADG--HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKA-VDWWSLGVLLYEMLT  188 (250)
T ss_pred             CCceecCCCcceEEEcCCC--cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCch-hhHHHHHHHHHHHHH
Confidence            4799999999999998776  7999999998765433 22334467889999999977666544 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH---HHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI---PEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~---~eil~hp~~  144 (225)
                      |..||.....    ......+.......+  ...+..+.+++++||..+|.+||++   .++++||||
T Consensus       189 g~~p~~~~~~----~~~~~~~~~~~~~~~--~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         189 GKPPFYAEDR----KEIYEKILKDPLRFP--EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             CCCCCCCCCH----HHHHHHHhcCCCCCC--CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            9999965443    222333333333333  3468899999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=175.00  Aligned_cols=148  Identities=33%  Similarity=0.593  Sum_probs=116.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCC-CCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-VLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|||+||||.+|+|++..+  ++||+|||+++.. .......+++|||.|.|||++++..|..+ +|+|+||++++||+.
T Consensus       370 rgiiyrdlkldnvlldaeg--hikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfs-vdwwalgvlmfemma  446 (593)
T KOG0695|consen  370 RGIIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFS-VDWWALGVLMFEMMA  446 (593)
T ss_pred             cCeeeeeccccceEEccCC--ceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCce-ehHHHHHHHHHHHHc
Confidence            4899999999999999887  8999999999854 34456677899999999999999999766 899999999999999


Q ss_pred             CCCCCCCC--C--ChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC------HHHHhcCcccCcCCC
Q 027327           80 GAYPFEDP--E--DPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT------IPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s------~~eil~hp~~~~~~~  149 (225)
                      |+.||.--  .  +...-.-.++-++....++|.  .+|-.+..+++..|++||.+|..      +.++..|+||+ ...
T Consensus       447 grspfdivgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr-~id  523 (593)
T KOG0695|consen  447 GRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFR-SID  523 (593)
T ss_pred             CCCCcceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhh-hCC
Confidence            99999521  1  111112233445555666665  47888889999999999999984      68999999997 344


Q ss_pred             ccccc
Q 027327          150 IEFME  154 (225)
Q Consensus       150 ~~~~~  154 (225)
                      ++.++
T Consensus       524 wd~le  528 (593)
T KOG0695|consen  524 WDLLE  528 (593)
T ss_pred             HHHHh
Confidence            44433

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2.3e-25  Score=168.85  Aligned_cols=144  Identities=24%  Similarity=0.352  Sum_probs=107.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .|+|||+|++|+||+.++  .+||+|||+++.+...     ......+.|.+|++||.+.+...++++.|||..|||+.+
T Consensus       144 kilHRDmKaaNvLIt~dg--ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimae  221 (376)
T KOG0669|consen  144 KILHRDMKAANVLITKDG--ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAE  221 (376)
T ss_pred             hHHhhcccHhhEEEcCCc--eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHH
Confidence            589999999999998776  7999999999754322     122345789999999999987766677999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccc--cC--------------CCC-----C---------CCCHHHHHHHHhhcc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHY--SI--------------PGY-----V---------RVSLECRHLLSRIFV  126 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~--------------~~~-----~---------~~~~~~~~li~~~l~  126 (225)
                      |+++.+.|.+......+.. +..++...-  .+              ++.     .         --.+++.+|+.+||.
T Consensus       222 Mwtrspimqgnteqqql~~-Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~  300 (376)
T KOG0669|consen  222 MWTRSPIMQGNTEQQQLHL-ISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLK  300 (376)
T ss_pred             HHccCccccCChHHHHHHH-HHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhc
Confidence            9999999988766444332 222221100  00              000     0         013367899999999


Q ss_pred             cCCCCCCCHHHHhcCcccCcCC
Q 027327          127 ADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus       127 ~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      +||.+|+++.+++.|.||.+..
T Consensus       301 ~DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  301 LDPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             cCcccCcchHhhhchhhhhcCC
Confidence            9999999999999999998753

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.92  E-value=5e-25  Score=183.56  Aligned_cols=134  Identities=28%  Similarity=0.408  Sum_probs=100.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.+.  .+||+|||+++........   ....++..|+|||++.+..++.+ +|||||||++|+|
T Consensus       233 ~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDi~slG~~l~el  309 (375)
T cd05104         233 KNCIHRDLAARNILLTHGR--ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFE-SDVWSYGILLWEI  309 (375)
T ss_pred             CCeeccCCchhhEEEECCC--cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCC-CCHHHHHHHHHHH
Confidence            4899999999999998765  6999999998754332221   11234567999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||........+...+..    ..........+.++++|+.+||..||++|||+.++++.
T Consensus       310 lt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         310 FSLGSSPYPGMPVDSKFYKMIKE----GYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HhcCCCCCCCCCchHHHHHHHHh----CccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            97 88999765443333332221    11222223467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.92  E-value=3.4e-25  Score=177.79  Aligned_cols=141  Identities=32%  Similarity=0.528  Sum_probs=106.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+|+||+|+||+++.++  .++|+|||++........ .....++..|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       135 ~gi~H~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Dv~slGvil~~l~~  211 (286)
T cd06614         135 QNVIHRDIKSDNILLSKDG--SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPK-VDIWSLGIMCIEMAE  211 (286)
T ss_pred             CCeeeCCCChhhEEEcCCC--CEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCc-cccHHHHHHHHHHHh
Confidence            4899999999999998766  799999998764432221 123357889999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||.............   .......+....++..+.+||++||+.+|.+||++.++++|+||.+.
T Consensus       212 g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         212 GEPPYLREPPLRALFLIT---TKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             CCCCCCCCCHHHHHHHHH---hcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence            999997644322222111   11111222223378899999999999999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.92  E-value=4.4e-25  Score=178.70  Aligned_cols=137  Identities=21%  Similarity=0.316  Sum_probs=98.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....++..|+|||++.+..++.+ +|||||||++|+|
T Consensus       157 ~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el  233 (304)
T cd05096         157 LNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTA-SDVWAFGVTLWEI  233 (304)
T ss_pred             CCccccCcchhheEEcCCc--cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCch-hhhHHHHHHHHHH
Confidence            4899999999999998766  799999999875432221   122345778999999987777655 9999999999999


Q ss_pred             Hh--CCCCCCCCCChhHHHHHHHHHhcc--cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV--GAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~--g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++  +..||...................  .........++..+.+|+.+||..+|.+|||+.+|.+
T Consensus       234 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         234 LMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            86  567887654433322222111111  1111122347889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.92  E-value=4e-26  Score=190.47  Aligned_cols=133  Identities=26%  Similarity=0.382  Sum_probs=98.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC---CCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~---~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il   74 (225)
                      |+|||||||..|||+.+++  +|||+|||++..-..   ........|...|||||++..   .+|+.. +|||||||++
T Consensus       507 K~IIHrDLKSnNIFl~~~~--kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~q-SDVYaFGiV~  583 (678)
T KOG0193|consen  507 KNIIHRDLKSNNIFLHEDL--KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQ-SDVYAFGIVW  583 (678)
T ss_pred             hhhhhhhccccceEEccCC--cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcc-cchhhhhHHH
Confidence            6899999999999998765  799999999864322   223334468889999999963   345544 9999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcc---cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSV---HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |||++|..||.. +..+.   ++-.+.+.   .-......+.+.++++|+..||.++++.||.+.+||.
T Consensus       584 YELltg~lPysi-~~~dq---IifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  584 YELLTGELPYSI-QNRDQ---IIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHhCcCCcCC-CChhh---eEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            999999999983 33222   11111111   0111122346679999999999999999999999886

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.92  E-value=4.9e-25  Score=173.84  Aligned_cols=133  Identities=28%  Similarity=0.439  Sum_probs=102.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+||+++.++  .+||+|||.+.......   ......++..|+|||.+....++.+ +|+||||+++|+|
T Consensus       124 ~~i~H~di~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l  200 (262)
T cd00192         124 KKFVHRDLAARNCLVGEDL--VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSK-SDVWSFGVLLWEI  200 (262)
T ss_pred             CCcccCccCcceEEECCCC--cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchh-hccHHHHHHHHHH
Confidence            4899999999999998776  79999999998654432   2233457889999999987766555 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||........    ...+.. ....+....++.++.+++.+||..+|.+|||+.+++++
T Consensus       201 ~~~g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         201 FTLGATPYPGLSNEEV----LEYLRK-GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HhcCCCCCCCCCHHHH----HHHHHc-CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            98 6999987644322    222222 22223334578999999999999999999999999876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=5.5e-25  Score=176.73  Aligned_cols=143  Identities=34%  Similarity=0.533  Sum_probs=105.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||.||+++.++  .++|+|||+++........  ....++..|+|||.+.+.. ....++|+||||+++|+|
T Consensus       124 ~~~~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el  201 (288)
T cd05583         124 LGIIYRDIKLENILLDSEG--HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFEL  201 (288)
T ss_pred             CCeeccCCCHHHeEECCCC--CEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHH
Confidence            4899999999999998766  7999999998754333221  2235788999999986544 223458999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC---HHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT---IPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s---~~eil~hp~~~~~  147 (225)
                      ++|..||...............+.......  ...++..+.++|.+||+.+|++|||   +.++++||||+..
T Consensus       202 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         202 LTGASPFTVDGEQNSQSEISRRILKSKPPF--PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             HhCCCCcccCcccchHHHHHHHHHccCCCC--CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            999999964332222223333333333322  2347889999999999999999998   5677999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.92  E-value=4.8e-25  Score=175.44  Aligned_cols=133  Identities=23%  Similarity=0.355  Sum_probs=100.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       131 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Di~slG~il~el  207 (272)
T cd05075         131 KSFIHRDLAARNCMLNENM--NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTK-SDVWSFGVTMWEI  207 (272)
T ss_pred             CCeeccccchhheEEcCCC--CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChH-HHHHHHHHHHHHH
Confidence            4899999999999998766  799999999886543221   122245678999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.......    ....+.... ..+....++..+.+++.+||..+|.+|||+.+++++
T Consensus       208 ~~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         208 ATRGQTPYPGVENSE----IYDYLRQGN-RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HcCCCCCCCCCCHHH----HHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            98 889997654322    222222221 122234578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.92  E-value=5.3e-25  Score=176.03  Aligned_cols=133  Identities=22%  Similarity=0.432  Sum_probs=99.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++........   ....+++.|+|||.+.+..++.+ +|||||||++|+|
T Consensus       128 ~~iiH~dlkp~Nil~~~~~--~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~el  204 (279)
T cd05109         128 VRLVHRDLAARNVLVKSPN--HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQ-SDVWSYGVTVWEL  204 (279)
T ss_pred             CCeeccccccceEEEcCCC--cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCch-hHHHHHHHHHHHH
Confidence            4899999999999997666  6999999998765432221   11234668999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||..... ......+    ......+....++..+.+++.+||..||++||++.+++..
T Consensus       205 ~t~g~~p~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~  264 (279)
T cd05109         205 MTFGAKPYDGIPA-REIPDLL----EKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE  264 (279)
T ss_pred             HcCCCCCCCCCCH-HHHHHHH----HCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            98 8999975433 2222222    1222223334578999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=9.7e-25  Score=177.84  Aligned_cols=140  Identities=29%  Similarity=0.408  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc---CCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS---RKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~---~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||+|+||+++.++  .+||+|||++.....   .....+++.|+|||.+.   ...++. ++|+|||||++|+|
T Consensus       144 ~~i~H~dL~p~Nil~~~~~--~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~-~~Dv~slGvil~el  217 (317)
T cd06635         144 HNMIHRDIKAGNILLTEPG--QVKLADFGSASIASP---ANSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIEL  217 (317)
T ss_pred             CCcccCCCCcccEEECCCC--CEEEecCCCccccCC---cccccCCccccChhhhhcCCCCCCCc-cccHHHHHHHHHHH
Confidence            4799999999999998766  799999998764322   23446888999999974   234444 49999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      ++|..||...........    +............++..+++|+.+||+.+|.+||++.++++|+|+......
T Consensus       218 ~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         218 AERKPPLFNMNAMSALYH----IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             HhCCCCCCCccHHHHHHH----HHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence            999999976543222222    222222222223578889999999999999999999999999999765443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.92  E-value=7.6e-25  Score=173.72  Aligned_cols=132  Identities=23%  Similarity=0.373  Sum_probs=99.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|++||||||+||+++.++  .+||+|||++..........  ....+..|+|||.+.+..++.+ +|||||||++|+|+
T Consensus       123 ~~i~H~dlkp~nil~~~~~--~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~  199 (263)
T cd05052         123 KNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK-SDVWAFGVLLWEIA  199 (263)
T ss_pred             CCEeecccCcceEEEcCCC--cEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCch-hHHHHHHHHHHHHH
Confidence            4899999999999998766  79999999987654322211  1223567999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||.+.....    ....+.. .+.......++.++.+++.+||..+|.+|||+.++++
T Consensus       200 t~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         200 TYGMSPYPGIDLSQ----VYELLEK-GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             cCCCCCCCCCCHHH----HHHHHHC-CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            8 999997654322    2222222 1222333457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.92  E-value=4.4e-25  Score=177.39  Aligned_cols=132  Identities=25%  Similarity=0.405  Sum_probs=99.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+|||++.++  .+||+|||+++.......   .....++..|+|||++.+..++.+ +|+|||||++|+|
T Consensus       139 ~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDiwslG~il~~l  215 (288)
T cd05093         139 QHFVHRDLATRNCLVGENL--LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSLGVVLWEI  215 (288)
T ss_pred             CCeeecccCcceEEEccCC--cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998776  799999999875432211   122345678999999987776655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||.......    ....+..... .+....++.++.+|+.+||+.+|.+|||+.+++.
T Consensus       216 ~t~g~~p~~~~~~~~----~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         216 FTYGKQPWYQLSNNE----VIECITQGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HhCCCCCCCCCCHHH----HHHHHHcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            98 899997655432    2223333221 1222357889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.92  E-value=3.4e-25  Score=160.42  Aligned_cols=144  Identities=25%  Similarity=0.407  Sum_probs=112.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      +++||||||.|.||+.++  .+||+|||+++-+.... .....+.|.+|++|.++.+...++...|+||.|||+.|+.. 
T Consensus       121 nvlhrdlkpqnllin~ng--elkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelana  198 (292)
T KOG0662|consen  121 NVLHRDLKPQNLLINRNG--ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA  198 (292)
T ss_pred             hhhhccCCcceEEeccCC--cEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhc
Confidence            578999999999998887  79999999998765554 33445789999999999887655555899999999999986 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc-ccCC------C------C----------CCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH-YSIP------G------Y----------VRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~------~------~----------~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |++.|.+..-.+++..++..+.... -.+|      .      +          ++++...++|++++|.-+|.+|++++
T Consensus       199 grplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisae  278 (292)
T KOG0662|consen  199 GRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAE  278 (292)
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHH
Confidence            7888888777677766665443211 1111      1      1          12334568999999999999999999


Q ss_pred             HHhcCcccCcC
Q 027327          137 EIQKHPWFLKN  147 (225)
Q Consensus       137 eil~hp~~~~~  147 (225)
                      ++++||||...
T Consensus       279 aalqhpyf~d~  289 (292)
T KOG0662|consen  279 AALQHPYFSDF  289 (292)
T ss_pred             HHhcCcccccc
Confidence            99999999753

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=8.3e-25  Score=172.03  Aligned_cols=136  Identities=32%  Similarity=0.487  Sum_probs=104.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+||+++.++  .++|+|||++........ .....++..|+|||.+.+..+.. ++|+||+|+++|+|++
T Consensus       118 ~~i~H~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~-~~Dv~~lG~~l~~l~~  194 (254)
T cd06627         118 QGVIHRDIKAANILTTKDG--VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGAST-ASDIWSLGCTVIELLT  194 (254)
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCc-chhHHHHHHHHHHHHh
Confidence            4899999999999998765  799999999876543332 22346788999999987766544 4999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..||............   ......  +....++..+++++.+||..+|++|||+.+++.||||
T Consensus       195 g~~p~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         195 GNPPYYDLNPMAALFRI---VQDDHP--PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CCCCCCCccHHHHHHHH---hccCCC--CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            99999765432222211   111111  2223578899999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.92  E-value=8e-25  Score=176.16  Aligned_cols=133  Identities=25%  Similarity=0.390  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||++........   .....++..|+|||.+.+..++.+ +|||||||++|+|
T Consensus       142 ~~i~H~dlkp~Nil~~~~~--~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  218 (291)
T cd05094         142 QHFVHRDLATRNCLVGANL--LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSFGVILWEI  218 (291)
T ss_pred             CCeeecccCcceEEEccCC--cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998776  799999999875433221   123356788999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.......    ....+...... .....++..+.+++.+||..+|.+|||+.++++.
T Consensus       219 ~t~g~~p~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~  278 (291)
T cd05094         219 FTYGKQPWFQLSNTE----VIECITQGRVL-ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI  278 (291)
T ss_pred             HhCCCCCCCCCCHHH----HHHHHhCCCCC-CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            98 999987654432    22222222221 2223468899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.92  E-value=7e-25  Score=175.26  Aligned_cols=135  Identities=21%  Similarity=0.322  Sum_probs=99.5

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|++||||||+||+++.++ ...+||+|||+++.......   ......+..|+|||++.+..++.+ +|||||||++|+
T Consensus       135 ~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~il~e  213 (277)
T cd05036         135 NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSK-TDVWSFGVLLWE  213 (277)
T ss_pred             CCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCch-hHHHHHHHHHHH
Confidence            4799999999999997643 22589999999876522211   112233567999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++ |..||........    ...+... ........++..+.+++.+||+.+|.+|||+.++++|
T Consensus       214 l~~~g~~pf~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         214 IFSLGYMPYPGRTNQEV----MEFVTGG-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHcCCCCCCCCCCHHHH----HHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            996 9999976544322    2222211 1122234578899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=1.8e-25  Score=167.06  Aligned_cols=135  Identities=23%  Similarity=0.262  Sum_probs=97.7

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAY   82 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~   82 (225)
                      .+|..-||+|||++.++  .+|+  ||+++.....    ...|++.|+|||++.+..++.+ +|||||||++|+|++|+.
T Consensus        32 ~lH~~~kp~Nil~~~~~--~~~~--fG~~~~~~~~----~~~g~~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg~~  102 (176)
T smart00750       32 ELHRQAKSGNILLTWDG--LLKL--DGSVAFKTPE----QSRVDPYFMAPEVIQGQSYTEK-ADIYSLGITLYEALDYEL  102 (176)
T ss_pred             HHHhcCCcccEeEcCcc--ceee--ccceEeeccc----cCCCcccccChHHhcCCCCcch-hhHHHHHHHHHHHHhCCC
Confidence            46777799999998776  6888  9998754332    2368899999999988888755 999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHHHhcccccC--CCCCCCCH--HHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           83 PFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSL--ECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        83 pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||.......................  +....++.  .+++|+.+||..+|.+||++.++++|+|+..
T Consensus       103 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      103 PYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             CccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            9976443222222221111111000  11112333  6899999999999999999999999998753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.92  E-value=5.3e-25  Score=164.79  Aligned_cols=145  Identities=24%  Similarity=0.364  Sum_probs=111.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+|||+||.|++|+.... .++|+|+|+|............+.+..|.-||.+..........|+|||||++..|+..
T Consensus       151 ~GImHRDVKPhNvmIdh~~r-kLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFr  229 (338)
T KOG0668|consen  151 MGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR  229 (338)
T ss_pred             cCcccccCCcceeeechhhc-eeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhc
Confidence            69999999999999997765 69999999999888777777788999999999998765444448999999999999999


Q ss_pred             CCCCCC-CCChhHHHHHHHHH---------hcccccCC---------------------C-CCCCCHHHHHHHHhhcccC
Q 027327           81 AYPFED-PEDPRNFKTTIQRI---------LSVHYSIP---------------------G-YVRVSLECRHLLSRIFVAD  128 (225)
Q Consensus        81 ~~pf~~-~~~~~~~~~~~~~~---------~~~~~~~~---------------------~-~~~~~~~~~~li~~~l~~d  128 (225)
                      +.||.. ..+.+++.++..-+         ......++                     . ..-+++++.+|+.++|.+|
T Consensus       230 kepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYD  309 (338)
T KOG0668|consen  230 KEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYD  309 (338)
T ss_pred             cCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhc
Confidence            988754 44444443332211         00000000                     0 0115689999999999999


Q ss_pred             CCCCCCHHHHhcCcccCc
Q 027327          129 PEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       129 P~~R~s~~eil~hp~~~~  146 (225)
                      -..|+||.|++.||||..
T Consensus       310 HqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  310 HQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             cccccchHHHhcCchHHH
Confidence            999999999999999964

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=8.4e-25  Score=179.11  Aligned_cols=143  Identities=30%  Similarity=0.476  Sum_probs=103.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||.||+++.++  .+||+|||++.....  ......++..|+|||.+.+....+.++|+||||+++|+|++|
T Consensus       127 ~~iiH~dl~p~Nili~~~~--~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg  202 (328)
T cd07856         127 AGVVHRDLKPSNILINENC--DLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG  202 (328)
T ss_pred             CCcccCCCCHHHEeECCCC--CEEeCccccccccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhC
Confidence            4899999999999998766  799999999874322  223346788999999986633334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHH--------------------hccc--ccCC---CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRI--------------------LSVH--YSIP---GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~--------------------~~~~--~~~~---~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||................                    ....  ...+   ....++..++++|++||+.+|++|||+
T Consensus       203 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~  282 (328)
T cd07856         203 KPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISA  282 (328)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCH
Confidence            99997654321111111000                    0000  0001   112467899999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .+++.||||...
T Consensus       283 ~ell~~~~~~~~  294 (328)
T cd07856         283 AEALAHPYLAPY  294 (328)
T ss_pred             HHHhcCCccccc
Confidence            999999999654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.92  E-value=7.3e-25  Score=174.53  Aligned_cols=132  Identities=24%  Similarity=0.363  Sum_probs=97.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      .|++||||||+|||++.++  .+||+|||++..............+..|+|||++....++.+ +|+|||||++|+|++ 
T Consensus       131 ~~i~H~dikp~nili~~~~--~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~il~el~~~  207 (270)
T cd05047         131 KQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN-SDVWSYGVLLWEIVSL  207 (270)
T ss_pred             CCEeecccccceEEEcCCC--eEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCch-hhHHHHHHHHHHHHcC
Confidence            4899999999999998776  799999999863322111112223567999999877766545 999999999999996 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |..||.......    ....+.. .........++.++.+|+.+||..+|.+|||+.++++
T Consensus       208 g~~pf~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         208 GGTPYCGMTCAE----LYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CCCCccccCHHH----HHHHHhC-CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            999997644322    2222222 1222223357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=1.2e-24  Score=171.47  Aligned_cols=135  Identities=33%  Similarity=0.458  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|++||||+|.||+++.++  .+||+|||++...... ......+++.|+|||.+.+..++.+ +|+||||+++|+|++|
T Consensus       122 ~~i~h~~l~~~ni~~~~~~--~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~-~D~~slG~~~~~l~~g  197 (256)
T cd08530         122 QKILHRDLKSANILLVAND--LVKIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYK-SDIWSLGCLLYEMATF  197 (256)
T ss_pred             CCcccCCCCcceEEEecCC--cEEEeeccchhhhccC-CcccccCCccccCHHHHCCCCCCch-hhHHHHHHHHHHHHhC
Confidence            4899999999999998765  7999999998765443 3334568889999999987777655 8999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +.||.......    ....+...... +....++.++++++.+||..+|.+||++.++++||++
T Consensus       198 ~~p~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         198 APPFEARSMQD----LRYKVQRGKYP-PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             CCCCCCCCHHH----HHHHHhcCCCC-CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            99997654322    22222222221 1223578899999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=7.5e-25  Score=174.74  Aligned_cols=135  Identities=38%  Similarity=0.679  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---------------------CCCcccCCCCCccccccCCc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---------------------PKSTVGTPAYIAPEVLSRKE   59 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---------------------~~~~~g~~~y~aPE~l~~~~   59 (225)
                      .|++|+||+|+||+++.++  .++|+|||++........                     .....++..|+|||++....
T Consensus       121 ~~~~H~dl~~~ni~i~~~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  198 (280)
T cd05581         121 KGIIHRDLKPENILLDKDM--HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP  198 (280)
T ss_pred             CCeeecCCCHHHeEECCCC--CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC
Confidence            4899999999999998766  799999999875433221                     12235788999999987766


Q ss_pred             cCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH----
Q 027327           60 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI----  135 (225)
Q Consensus        60 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~----  135 (225)
                      ++.+ +|+||||++++++++|+.||........    ...+.......+  ..++..+.+||.+||..+|.+||++    
T Consensus       199 ~~~~-~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~  271 (280)
T cd05581         199 AGKS-SDLWALGCIIYQMLTGKPPFRGSNEYLT----FQKILKLEYSFP--PNFPPDAKDLIEKLLVLDPQDRLGVNEGY  271 (280)
T ss_pred             CChh-hhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHHhcCCCCC--CccCHHHHHHHHHHhcCCHhhCCCcccCH
Confidence            6544 9999999999999999999987653322    223333333333  3578899999999999999999999    


Q ss_pred             HHHhcCccc
Q 027327          136 PEIQKHPWF  144 (225)
Q Consensus       136 ~eil~hp~~  144 (225)
                      .++++||||
T Consensus       272 ~~ll~~~~~  280 (280)
T cd05581         272 DELKAHPFF  280 (280)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.92  E-value=6.7e-25  Score=174.53  Aligned_cols=133  Identities=25%  Similarity=0.355  Sum_probs=100.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++........   ....++..|+|||.+.+..++.+ +|||||||++|+|
T Consensus       132 ~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~SlG~il~el  208 (273)
T cd05035         132 RNFIHRDLAARNCMLREDM--TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSK-SDVWAFGVTMWEI  208 (273)
T ss_pred             CCeeccccchheEEECCCC--eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcc-cchHHHHHHHHHH
Confidence            4799999999999998766  7999999998754333221   11234668999999877777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+......    ...+.... .......++..+.+++.+||+.+|.+|||+.+++++
T Consensus       209 ~~~g~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         209 ATRGQTPYPGVENHEI----YDYLRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HhCCCCCCCCCCHHHH----HHHHHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            98 8899976554322    22222221 222234578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.92  E-value=4.1e-25  Score=178.97  Aligned_cols=133  Identities=24%  Similarity=0.372  Sum_probs=98.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      +||+||||||+|||++.++  .+||+|||++.............++..|+|||.+.+..++.+ +|||||||++|+|++ 
T Consensus       143 ~gi~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~ellt~  219 (303)
T cd05088         143 KQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN-SDVWSYGVLLWEIVSL  219 (303)
T ss_pred             CCccccccchheEEecCCC--cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCccc-ccchhhhhHHHHHHhc
Confidence            4899999999999998766  799999999864322111122234567999999877666544 999999999999998 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |..||.........    ..+ ...........++..+.+|+.+||+.+|.+||++.+++++
T Consensus       220 g~~p~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         220 GGTPYCGMTCAELY----EKL-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCCCcccCChHHHH----HHH-hcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999765443222    222 1122222233478899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=1e-24  Score=174.74  Aligned_cols=137  Identities=25%  Similarity=0.349  Sum_probs=97.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +||+||||||+|||++.++  .+||+|||+++.......    .....++..|+|||.+.+..++.+ +||||||+++|+
T Consensus       126 ~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Di~slG~~l~e  202 (283)
T cd05080         126 QHYIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYA-SDVWSFGVTLYE  202 (283)
T ss_pred             CCeeccccChheEEEcCCC--cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcc-cccHHHHHHHHH
Confidence            4899999999999998766  799999999875543221    112235667999999987776655 999999999999


Q ss_pred             HHhCCCCCCCCCChhH--H--------HHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLVGAYPFEDPEDPRN--F--------KTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++|..||........  .        ..............+....++.++.+++.+||+.+|++|||+.++++
T Consensus       203 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         203 LLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999999865332100  0        00001111111122223457889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.92  E-value=9.4e-25  Score=174.44  Aligned_cols=133  Identities=20%  Similarity=0.289  Sum_probs=99.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+||+++.++  .+||+|||+++.......   .....+++.|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       138 ~~~vH~dlkp~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el  214 (277)
T cd05062         138 NKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY-SDVWSFGVVLWEI  214 (277)
T ss_pred             CCcccCCcchheEEEcCCC--CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCch-hHHHHHHHHHHHH
Confidence            4799999999999998766  799999999875432211   112245678999999987777655 8999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.........    ..+...... +.....+..+.+++.+||+.+|.+|||+.+++++
T Consensus       215 ~~~~~~p~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         215 ATLAEQPYQGMSNEQVL----RFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HcCCCCCCCCCCHHHHH----HHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            98 78899765443222    222222211 2223578899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.92  E-value=1.7e-24  Score=173.23  Aligned_cols=133  Identities=21%  Similarity=0.348  Sum_probs=99.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|++||||||+|||++.++  .+||+|||+++.......   .....++..|+|||.+.+..++.+ +|+|||||++|++
T Consensus       128 ~~iiH~dlkp~nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~el  204 (279)
T cd05111         128 HRMVHRNLAARNILLKSDS--IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQ-SDVWSYGVTVWEM  204 (279)
T ss_pred             CCEeccccCcceEEEcCCC--cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCch-hhHHHHHHHHHHH
Confidence            4899999999999998766  799999999975433221   122346678999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+..... .....    ......+.....+..+..++.+||..+|.+|||+.++++.
T Consensus       205 ~t~g~~p~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~  264 (279)
T cd05111         205 MSYGAEPYAGMRPHE-VPDLL----EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE  264 (279)
T ss_pred             HcCCCCCCCCCCHHH-HHHHH----HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            98 999997654321 22222    2212222223467789999999999999999999998763

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.92  E-value=1.1e-24  Score=174.20  Aligned_cols=139  Identities=27%  Similarity=0.401  Sum_probs=105.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|++|+||||.||+++.++  .++|+|||++........ .....++..|+|||.+.+..++.+ +|+|||||++|+|++
T Consensus       120 ~~i~h~dl~p~Ni~i~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Dv~slG~~l~~l~~  196 (277)
T cd06641         120 EKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK-ADIWSLGITAIELAK  196 (277)
T ss_pred             CCeecCCCCHHhEEECCCC--CEEEeecccceecccchhhhccccCCccccChhhhccCCCCch-hhHHHHHHHHHHHHc
Confidence            4899999999999998766  699999999865433221 123357889999999977666544 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||........    ...+.... .......++.++.+++.+||..+|.+||++.++++||||.+.
T Consensus       197 g~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         197 GEPPHSELHPMKV----LFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             CCCCCCccchHHH----HHHHhcCC-CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence            9999975443221    11121111 111123468899999999999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.92  E-value=1.2e-24  Score=174.44  Aligned_cols=133  Identities=20%  Similarity=0.372  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.+.  .+||+|||+++.......   .....++..|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       143 ~~i~H~dlkp~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el  219 (283)
T cd05090         143 HFFVHKDLAARNILIGEQL--HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSD-SDIWSFGVVLWEI  219 (283)
T ss_pred             cCeehhccccceEEEcCCC--cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCch-hhhHHHHHHHHHH
Confidence            4899999999999998766  699999999875433221   122345677999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+....    .....+... ...+....++..+++++.+||+.+|.+||++.+|+++
T Consensus       220 ~~~g~~p~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         220 FSFGLQPYYGFSNQ----EVIEMVRKR-QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HcCCCCCCCCCCHH----HHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            98 99999765432    222222221 1223334578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.92  E-value=1.3e-24  Score=174.60  Aligned_cols=138  Identities=22%  Similarity=0.383  Sum_probs=102.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+||+++.++  .+||+|||+++.......   .....++..|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       138 ~~i~H~dikp~nili~~~~--~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~DvwslG~~l~el  214 (288)
T cd05061         138 KKFVHRDLAARNCMVAHDF--TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTS-SDMWSFGVVLWEI  214 (288)
T ss_pred             CCCcCCCCChheEEEcCCC--cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChH-hHHHHHHHHHHHH
Confidence            4899999999999998766  799999999875432221   112245677999999987777655 8999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc------CcccCc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK------HPWFLK  146 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~------hp~~~~  146 (225)
                      ++ |..||.......    ....+..... .+.....+..+.+++.+||+.+|.+|||+.++++      ||||..
T Consensus       215 ~~~~~~p~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         215 TSLAEQPYQGLSNEQ----VLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             HhCCCCCCCCCCHHH----HHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            98 788997654332    2222222211 1122346789999999999999999999999976      888853

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.92  E-value=8.8e-25  Score=174.98  Aligned_cols=132  Identities=22%  Similarity=0.416  Sum_probs=99.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       141 ~~i~H~dlkp~nil~~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  217 (280)
T cd05092         141 LHFVHRDLATRNCLVGQGL--VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDIWSFGVVLWEI  217 (280)
T ss_pred             CCeecccccHhhEEEcCCC--CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCch-hhHHHHHHHHHHH
Confidence            4899999999999998765  799999999874432211   122335678999999987777655 8999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||...........    +.... .......+++.+.+|+.+||..+|.+||++.++++
T Consensus       218 ~~~g~~p~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         218 FTYGKQPWYQLSNTEAIEC----ITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HcCCCCCCccCCHHHHHHH----HHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            98 8999976544332222    22211 11222357899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=1.4e-24  Score=171.71  Aligned_cols=135  Identities=33%  Similarity=0.498  Sum_probs=102.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|++|+||||+||+++.+   .+||+|||++........ .....+++.|+|||.+.+..++.+ +|+||+|+++|+|++
T Consensus       125 ~~i~h~~l~~~nili~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slG~~~~~l~~  200 (260)
T cd08222         125 RRILHRDLKAKNIFLKNN---LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSK-SDIWSLGCILYEMCC  200 (260)
T ss_pred             cCccccCCChhheEeecC---CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCch-hhHHHHHHHHHHHHh
Confidence            489999999999999743   599999999875433222 223457889999999877666655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |..||.....    ......+...... .....++.++.++|.+||..+|.+||++.++++||||
T Consensus       201 ~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         201 LAHAFEGQNF----LSVVLRIVEGPTP-SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             CCCCCCCccH----HHHHHHHHcCCCC-CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            9999965432    2222233222111 1123578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.92  E-value=8.4e-25  Score=176.01  Aligned_cols=133  Identities=26%  Similarity=0.409  Sum_probs=99.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....++..|+|||++.+..++.+ +|||||||++|+|
T Consensus       151 ~~ivH~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  227 (293)
T cd05053         151 KKCIHRDLAARNVLVTEDH--VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLLWEI  227 (293)
T ss_pred             CCccccccceeeEEEcCCC--eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcc-cceeehhhHHHHH
Confidence            4899999999999998766  799999999876443221   111234567999999877777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||..........    .+.. ..........+..+.+|+.+||..+|.+|||+.+++++
T Consensus       228 ~~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         228 FTLGGSPYPGIPVEELFK----LLKE-GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             hcCCCCCCCCCCHHHHHH----HHHc-CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            97 999997654433222    2222 11222233578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.92  E-value=1.6e-24  Score=171.19  Aligned_cols=130  Identities=22%  Similarity=0.390  Sum_probs=98.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      .||+||||||+||+++.++  .+||+|||+++......  ....++..|+|||++.+..++.+ +|+|||||++|+|++ 
T Consensus       121 ~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~i~~~l~~~  195 (256)
T cd05082         121 NNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSF  195 (256)
T ss_pred             CCEeccccchheEEEcCCC--cEEecCCccceeccccC--CCCccceeecCHHHHccCCCCch-hhhHHHHHHHHHHHhC
Confidence            4899999999999998776  79999999987543221  22334568999999987777655 999999999999997 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |+.||......    .....+... ........+++.+.+++.+||..+|.+|||+.++++
T Consensus       196 g~~p~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         196 GRVPYPRIPLK----DVVPRVEKG-YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             CCCCCCCCCHH----HHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            99999754432    222222221 222223457899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.4e-24  Score=170.97  Aligned_cols=136  Identities=35%  Similarity=0.491  Sum_probs=102.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .|++||||||+||+++.++  .++|+|||+++.....    .......++..|+|||.+.+..++.+ +|+|||||++|+
T Consensus       125 ~~i~H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~  201 (264)
T cd06653         125 NMIVHRDIKGANILRDSAG--NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRK-ADVWSVACTVVE  201 (264)
T ss_pred             CCEecCCCCHHHEEEcCCC--CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCcc-ccHHHHHHHHHH
Confidence            4799999999999998766  6999999998754321    11123458889999999987766544 899999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |++|+.||........   .. .+.........+..++..+.+++.+||. +|.+||++.+++.|||.
T Consensus       202 l~~g~~p~~~~~~~~~---~~-~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         202 MLTEKPPWAEYEAMAA---IF-KIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHhCCCCCCccCHHHH---HH-HHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            9999999976543322   22 2222211112233578999999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.92  E-value=1.9e-24  Score=171.58  Aligned_cols=135  Identities=29%  Similarity=0.436  Sum_probs=101.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+|+||||+||+++.++  .++|+|||++........ .....++..|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       125 ~~i~H~dl~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~-~Dv~slG~il~~l~~  201 (267)
T cd08229         125 RRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK-SDIWSLGCLLYEMAA  201 (267)
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccch-hhHHHHHHHHHHHHh
Confidence            4899999999999998766  799999999875443322 223468889999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |..||......  .......+............++..+++++.+||..+|.+|||+.+|++
T Consensus       202 g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         202 LQSPFYGDKMN--LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             CCCCcccccch--HHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            99999754321  122223333222222222347889999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.2e-24  Score=170.46  Aligned_cols=132  Identities=29%  Similarity=0.417  Sum_probs=99.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC----CcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK----STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~----~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .|++||||||+|||++.++  .+||+|||+++.........    ...++..|+|||.+.+..++.+ +|+||||+++|+
T Consensus       114 ~~i~H~di~p~nili~~~~--~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~  190 (257)
T cd05060         114 KHFVHRDLAARNVLLVNRH--QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSK-SDVWSYGVTLWE  190 (257)
T ss_pred             cCeeccCcccceEEEcCCC--cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCcc-chHHHHHHHHHH
Confidence            4799999999999998776  79999999987553332211    1123457999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++ |..||.......    ....+... ...+....++..+++++.+||..+|.+||++.++++
T Consensus       191 ~~~~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         191 AFSYGAKPYGEMKGAE----VIAMLESG-ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHcCCCCCcccCCHHH----HHHHHHcC-CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            997 999997654322    22222222 222333457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.92  E-value=1.6e-24  Score=171.55  Aligned_cols=132  Identities=24%  Similarity=0.390  Sum_probs=99.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+||+++.++  .+||+|||++.........  ....++..|+|||.+.+..++.+ +|+|||||++|+|+
T Consensus       122 ~~i~H~dl~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~l~  198 (261)
T cd05072         122 KNYIHRDLRAANVLVSESL--MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK-SDVWSFGILLYEIV  198 (261)
T ss_pred             CCeeccccchhhEEecCCC--cEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChh-hhhhhhHHHHHHHH
Confidence            4799999999999998776  7999999999754332211  12235667999999987776555 89999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||.........    ..+.. ....+....++.++.+++.+||..+|++||+++++++
T Consensus       199 t~g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         199 TYGKIPYPGMSNSDVM----SALQR-GYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             ccCCCCCCCCCHHHHH----HHHHc-CCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            8 99999765432222    22221 2233444568899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=1.9e-24  Score=171.78  Aligned_cols=133  Identities=29%  Similarity=0.437  Sum_probs=102.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      ||+||||||+||+++.++  .+||+|||++.............++..|+|||.+.+..++.+ +|+||||+++|+|++|.
T Consensus       134 ~i~H~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~Dv~slG~ll~~l~~g~  210 (269)
T cd08528         134 RIVHRDLTPNNIMLGEDD--KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEK-ADVWAFGCILYQMCTLQ  210 (269)
T ss_pred             ceeecCCCHHHEEECCCC--cEEEecccceeecccccccccccCcccCcChhhhcCCCCchH-HHHHHHHHHHHHHHhCC
Confidence            699999999999998766  799999999976544433344568889999999987776544 99999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      .||.......    ....+............++..+.+|+.+||..||.+||++.++..+
T Consensus       211 ~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         211 PPFYSTNMLS----LATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CcccccCHHH----HHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            9997544322    2222222222222223578899999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.91  E-value=2.5e-24  Score=169.93  Aligned_cols=133  Identities=24%  Similarity=0.394  Sum_probs=101.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|++||||||+||+++.++  .+||+|||+++.......    .....++..|+|||.+.+..++.+ +|+|||||++|+
T Consensus       116 ~~i~H~di~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~Di~slG~~l~e  192 (257)
T cd05040         116 KRFIHRDLAARNILLASDD--KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHA-SDVWMFGVTLWE  192 (257)
T ss_pred             CCccccccCcccEEEecCC--EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCch-hhhHHHHHHHHH
Confidence            4899999999999998776  799999999876543221    112346778999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++ |..||...........    +.......+.....+..+.+++.+||..+|.+||++.++++
T Consensus       193 l~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         193 MFTYGEEPWAGLSGSQILKK----IDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHhCCCCCCCCCCHHHHHHH----HHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            998 9999976544332222    22222222333357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.1e-24  Score=172.23  Aligned_cols=133  Identities=23%  Similarity=0.329  Sum_probs=99.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++.......   .....++..|+|||.+.+..++.+ +|+|||||++|++
T Consensus       138 ~~i~H~di~p~nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  214 (277)
T cd05032         138 KKFVHRDLAARNCMVAEDL--TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTK-SDVWSFGVVLWEM  214 (277)
T ss_pred             CCccccccChheEEEcCCC--CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcc-cchHHHHHHHHHh
Confidence            4899999999999998776  799999999875433221   123346778999999977776655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||........    ...+... ...+.+..++..+.+++.+||+.+|++|||+.+++..
T Consensus       215 ~t~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         215 ATLAEQPYQGLSNEEV----LKFVIDG-GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS  274 (277)
T ss_pred             hccCCCCCccCCHHHH----HHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            98 9999976543222    2222221 1122233478899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.91  E-value=1.6e-24  Score=172.35  Aligned_cols=138  Identities=22%  Similarity=0.326  Sum_probs=95.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCC------ccCCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRK------EYDGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~------~~~~~~~DiwslG   71 (225)
                      +||+||||||+|||++.++  .+||+|||++........   .....+++.|+|||++...      ...+.++||||||
T Consensus       119 ~~ivH~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  196 (269)
T cd05042         119 ADFIHSDLALRNCQLTADL--SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG  196 (269)
T ss_pred             cCEecccccHhheEecCCC--cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence            4899999999999998776  799999999864322211   1223456779999997431      1223459999999


Q ss_pred             HHHHHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           72 VTLYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        72 ~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++|+|++ |..||........+...................++..+.+++..|| .+|.+|||+++|++-
T Consensus       197 ~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~  266 (269)
T cd05042         197 VTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL  266 (269)
T ss_pred             HHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence            99999998 7888876554333332222111111111112357788899999998 599999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.91  E-value=1e-24  Score=172.08  Aligned_cols=133  Identities=29%  Similarity=0.494  Sum_probs=102.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+|+||||+||+++.++  .++|+|||.+........ .....+++.|+|||++.+..++.+ +|+||||+++|+|++
T Consensus       119 ~~i~H~dl~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~-~Dv~slG~i~~~l~~  195 (255)
T cd08219         119 KRVLHRDIKSKNIFLTQNG--KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNK-SDIWSLGCILYELCT  195 (255)
T ss_pred             CCcccCCCCcceEEECCCC--cEEEcccCcceeecccccccccccCCccccCHHHHccCCcCch-hhhhhhchhheehhh
Confidence            4899999999999998776  799999999875543322 223468889999999987776555 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |..||......    .....+...... +....++..+++||.+||+.+|.+|||+.+++.-
T Consensus       196 g~~p~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         196 LKHPFQANSWK----NLILKVCQGSYK-PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ccCCCCCCCHH----HHHHHHhcCCCC-CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            99999764332    222223222222 2223578899999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.91  E-value=2.1e-24  Score=173.53  Aligned_cols=132  Identities=28%  Similarity=0.460  Sum_probs=99.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....++..|+|||.+.+..++.+ +||||||+++|+|
T Consensus       146 ~~ivH~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~~l~el  222 (290)
T cd05045         146 MKLVHRDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEI  222 (290)
T ss_pred             CCeehhhhhhheEEEcCCC--cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchH-hHHHHHHHHHHHH
Confidence            4899999999999998766  799999999875432211   112235678999999877766655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||.+..... +...   . ......+....++.++++|+.+||+.+|.+||++.++++
T Consensus       223 ~t~g~~p~~~~~~~~-~~~~---~-~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         223 VTLGGNPYPGIAPER-LFNL---L-KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HhcCCCCCCCCCHHH-HHHH---H-hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            98 999997654322 2222   1 122223333457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.91  E-value=2.9e-24  Score=173.93  Aligned_cols=133  Identities=29%  Similarity=0.444  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....++..|+|||.+.+..++.+ +||||+||++|+|
T Consensus       160 ~~ivH~dlkp~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslGvil~el  236 (302)
T cd05055         160 KNCIHRDLAARNVLLTHGK--IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFE-SDVWSYGILLWEI  236 (302)
T ss_pred             CCeehhhhccceEEEcCCC--eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcH-hHHHHHHHHHHHH
Confidence            4899999999999998665  799999999875433221   112345678999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||........+....    ............+..+.+|+.+||..+|++|||+.++++
T Consensus       237 ~t~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         237 FSLGSNPYPGMPVDSKFYKLI----KEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HhCCCCCcCCCCchHHHHHHH----HcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            98 999997655433332222    122222223357889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.91  E-value=2.7e-24  Score=183.32  Aligned_cols=145  Identities=22%  Similarity=0.277  Sum_probs=101.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCC--cccCCCCCccccccCCcc------------------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS--TVGTPAYIAPEVLSRKEY------------------   60 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~g~~~y~aPE~l~~~~~------------------   60 (225)
                      .||+||||||+|||++.++  .+||+|||++...........  ..+++.|+|||.+.....                  
T Consensus       328 ~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~  405 (507)
T PLN03224        328 IGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAW  405 (507)
T ss_pred             CCeecCCCchHhEEECCCC--cEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHH
Confidence            4799999999999998766  799999999875433222222  235789999999853221                  


Q ss_pred             --C-CCcccHHHHHHHHHHHHhCCC-CCCCCCChhH-------HHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCC
Q 027327           61 --D-GKIADVWSCGVTLYVMLVGAY-PFEDPEDPRN-------FKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADP  129 (225)
Q Consensus        61 --~-~~~~DiwslG~il~~ll~g~~-pf~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  129 (225)
                        . ....|+||+||++|+|+++.. ||........       .....+......+.++.....+..+++|+.+||..+|
T Consensus       406 ~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~  485 (507)
T PLN03224        406 LYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRD  485 (507)
T ss_pred             hcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCC
Confidence              1 112699999999999999875 7653221110       0111122222334444455688999999999999866


Q ss_pred             ---CCCCCHHHHhcCcccCcC
Q 027327          130 ---EKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       130 ---~~R~s~~eil~hp~~~~~  147 (225)
                         .+|+|+.|+|+||||...
T Consensus       486 ~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        486 QANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             CCcccCCCHHHHhCCCCcCCC
Confidence               689999999999999753

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.91  E-value=2e-24  Score=171.43  Aligned_cols=131  Identities=23%  Similarity=0.325  Sum_probs=94.3

Q ss_pred             CceEecCCCCCcEEEcCCCC-----CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA-----PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~-----~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +||+||||||+|||++.++.     ..+|++|||++.....   .....++..|+|||++......+.++|||||||++|
T Consensus       124 ~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~  200 (262)
T cd05077         124 KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLW  200 (262)
T ss_pred             CCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHH
Confidence            48999999999999975442     1389999999865422   223457888999999874443344599999999999


Q ss_pred             HHH-hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           76 VML-VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        76 ~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +|+ .|..||........ .    ........  .....+.++.+||.+||+.+|.+||++.+|+++
T Consensus       201 el~~~~~~p~~~~~~~~~-~----~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         201 EICYNGEIPLKDKTLAEK-E----RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHhCCCCCCCCcchhHH-H----HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            998 58888865432211 1    11111111  122356789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.91  E-value=2e-24  Score=171.40  Aligned_cols=136  Identities=28%  Similarity=0.427  Sum_probs=101.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .++|+|||++........ .....+++.|+|||.+.+..++.+ +|+||+|+++|+|++
T Consensus       125 ~~i~H~dl~~~nil~~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~-~Di~slG~~l~el~~  201 (267)
T cd08228         125 RRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK-SDIWSLGCLLYEMAA  201 (267)
T ss_pred             CCeeCCCCCHHHEEEcCCC--CEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCch-hhHHHHHHHHHHHhc
Confidence            4899999999999998766  699999999875433222 123458889999999987776555 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |+.||......  .......+............++..+.+++.+||..+|.+||++.++++.
T Consensus       202 g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         202 LQSPFYGDKMN--LFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             CCCCCcccccc--HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            99999654321  1222233322222211122467889999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.91  E-value=3.6e-24  Score=169.75  Aligned_cols=135  Identities=32%  Similarity=0.470  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .++|+|||++........ .....+++.|+|||.+.+..++.+ +|+||||+++|+|++
T Consensus       125 ~~i~h~dl~p~nil~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~il~~l~~  201 (267)
T cd08224         125 KRIMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK-SDIWSLGCLLYEMAA  201 (267)
T ss_pred             CCEecCCcChhhEEECCCC--cEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCch-hcHHHHHHHHHHHHH
Confidence            4899999999999998766  699999999875433322 223468889999999987777655 899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |+.||.....  ........+............++..+.++|.+||..+|.+|||+.+|++
T Consensus       202 g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         202 LQSPFYGDKM--NLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             CCCCcccCCc--cHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            9999965432  1222222222222221112257789999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=4.7e-24  Score=168.89  Aligned_cols=132  Identities=23%  Similarity=0.357  Sum_probs=98.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCC--cccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS--TVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+||+++.++  .+||+|||+++..........  ...+..|+|||.+.+..++.+ +|+||||+++|+|+
T Consensus       122 ~~i~H~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~  198 (261)
T cd05068         122 QNYIHRDLAARNVLVGENN--ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIK-SDVWSFGILLTEIV  198 (261)
T ss_pred             CCeeeccCCcceEEEcCCC--CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCch-hhHHHHHHHHHHHH
Confidence            4899999999999998776  699999999876542211111  122357999999987777655 89999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||.+........    .+.. ....+.....+..+.+++.+||+.+|.+||++.++++
T Consensus       199 t~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         199 TYGRMPYPGMTNAEVLQ----QVDQ-GYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             hcCCCCCCCCCHHHHHH----HHHc-CCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            8 999997654332222    2222 1222333457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.91  E-value=3.5e-24  Score=169.51  Aligned_cols=133  Identities=23%  Similarity=0.382  Sum_probs=98.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|++||||||+|||++.++  .+||+|||++.........    ....++..|+|||.+....++.+ +|+|||||++|+
T Consensus       114 ~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~e  190 (257)
T cd05115         114 KNFVHRDLAARNVLLVNQH--YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSR-SDVWSYGITMWE  190 (257)
T ss_pred             cCeeecccchheEEEcCCC--cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCch-hhHHHHHHHHHH
Confidence            4899999999999998766  7999999998754332211    11123568999999887776554 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +++ |..||........    ...+.... ..+.....+.++.+++.+||..+|++||++.++.+.
T Consensus       191 l~~~g~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~  251 (257)
T cd05115         191 AFSYGQKPYKKMKGPEV----MSFIEQGK-RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER  251 (257)
T ss_pred             HhcCCCCCcCcCCHHHH----HHHHHCCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            996 9999976554322    22222211 222233578999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.91  E-value=3.1e-24  Score=169.90  Aligned_cols=132  Identities=25%  Similarity=0.375  Sum_probs=99.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .++|+|||++.........  ....++..|+|||.+.+..++.+ +|+||||+++|+|+
T Consensus       121 ~~i~H~dl~~~Nill~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~-~Di~slG~~l~el~  197 (260)
T cd05069         121 MNYIHRDLRAANILVGDNL--VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELV  197 (260)
T ss_pred             CCEeecccCcceEEEcCCC--eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChH-HHHHHHHHHHHHHH
Confidence            4899999999999998776  6999999998754332211  12235678999999877776544 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||.+........    .+.. ....+....++..+.+++++||..+|.+||++.++++
T Consensus       198 t~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         198 TKGRVPYPGMVNREVLE----QVER-GYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             hCCCCCCCCCCHHHHHH----HHHc-CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            9 899998755433222    2222 1222333457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.91  E-value=3e-24  Score=169.58  Aligned_cols=132  Identities=24%  Similarity=0.401  Sum_probs=98.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||.++.........  ...++..|+|||++.+..++.+ +|+||||+++|+|+
T Consensus       119 ~~i~H~dl~p~ni~i~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~s~G~~l~el~  195 (256)
T cd05114         119 NSFIHRDLAARNCLVSSTG--VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSK-SDVWSFGVLMWEVF  195 (256)
T ss_pred             CCccccccCcceEEEcCCC--eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchh-hhhHHHHHHHHHHH
Confidence            4899999999999998766  69999999987543222211  2234567999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||........    ...+.... ........+..+.+++.+||..+|.+||++.++++
T Consensus       196 ~~g~~p~~~~~~~~~----~~~i~~~~-~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         196 TEGKMPFEKKSNYEV----VEMISRGF-RLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             cCCCCCCCCCCHHHH----HHHHHCCC-CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            9 8999976544322    22222221 11122236788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.91  E-value=4e-24  Score=173.97  Aligned_cols=133  Identities=23%  Similarity=0.358  Sum_probs=98.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....++..|+|||++.+..++.+ +||||||+++|+|
T Consensus       153 ~gi~H~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~~l~el  229 (314)
T cd05099         153 RRCIHRDLAARNVLVTEDN--VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGILMWEI  229 (314)
T ss_pred             CCeeeccccceeEEEcCCC--cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCcc-chhhHHHHHHHHH
Confidence            4899999999999998766  799999999975533211   111234467999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||........    ...+.... .......++.++++|+.+||..+|.+|||+.++++.
T Consensus       230 ~~~g~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         230 FTLGGSPYPGIPVEEL----FKLLREGH-RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             HhCCCCCCCCCCHHHH----HHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            98 8899976543222    22222221 112233578899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.6e-24  Score=170.00  Aligned_cols=133  Identities=22%  Similarity=0.390  Sum_probs=99.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||+++.........  ...++..|+|||.+.+..++.+ +|+||||+++|+|+
T Consensus       119 ~~i~H~dl~p~ni~i~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~-~Di~slG~il~~l~  195 (256)
T cd05059         119 NGFIHRDLAARNCLVGEDN--VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSK-SDVWSFGVLMWEVF  195 (256)
T ss_pred             CCcccccccHhhEEECCCC--cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCch-hhHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987543222111  1123457999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||.........    ..+.. ....+....++.++.+++.+||..+|++|||+.++++.
T Consensus       196 ~~g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         196 SEGKMPYERFSNSEVV----ESVSA-GYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             ccCCCCCCCCCHHHHH----HHHHc-CCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            8 89999765443222    22221 12223334578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.91  E-value=3.2e-24  Score=170.12  Aligned_cols=132  Identities=23%  Similarity=0.369  Sum_probs=99.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+||+++.++  .+||+|||.++........  ....++..|+|||.+.+..++.+ +|+|||||++|+|+
T Consensus       121 ~~i~H~dl~p~Nill~~~~--~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~DvwslG~~l~ell  197 (262)
T cd05071         121 MNYVHRDLRAANILVGENL--VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELT  197 (262)
T ss_pred             CCccccccCcccEEEcCCC--cEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCch-hhHHHHHHHHHHHH
Confidence            4899999999999998766  6999999998754332221  12345678999999877777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||.........    ..+.. ....+....++..+.+++.+||+.+|.+||++.++++
T Consensus       198 t~g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         198 TKGRVPYPGMVNREVL----DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             cCCCCCCCCCChHHHH----HHHhc-CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            9 88899765443222    22221 1122333457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.91  E-value=4.1e-24  Score=170.02  Aligned_cols=136  Identities=25%  Similarity=0.412  Sum_probs=94.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCcc------CCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEY------DGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~------~~~~~DiwslG   71 (225)
                      +|++||||||+||+++.++  ++||+|||+++.......   .....++..|+|||++.+...      .+.++|+||||
T Consensus       119 ~~i~H~dlkp~nil~~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  196 (269)
T cd05087         119 NNFIHSDLALRNCLLTADL--TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG  196 (269)
T ss_pred             CCEeccccCcceEEEcCCC--cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence            4899999999999998765  799999999864332211   122356788999999864321      13459999999


Q ss_pred             HHHHHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCC-CCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           72 VTLYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPG-YVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        72 ~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      +++|+|++ |..||............... .......+. ....+..+.+++++|+ .+|.+|||+.+|++
T Consensus       197 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         197 VTIWELFELGSQPYRHLSDEQVLTYTVRE-QQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHHhCCCCCCCCCChHHHHHHHhhc-ccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            99999996 99999765543322211111 111111111 1236778999999999 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.91  E-value=2.5e-24  Score=170.24  Aligned_cols=133  Identities=23%  Similarity=0.362  Sum_probs=99.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++|+||||.||+++.++  .+||+|||.++.........  ...++..|+|||.+.+..++.+ +|+|||||++|+|+
T Consensus       119 ~~i~H~dl~p~nili~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~-~Di~slG~~l~~l~  195 (256)
T cd05113         119 KQFIHRDLAARNCLVDDQG--CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSK-SDVWAFGVLMWEVY  195 (256)
T ss_pred             CCeeccccCcceEEEcCCC--CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccch-hHHHHHHHHHHHHh
Confidence            4899999999999998766  79999999987543322111  1235567999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||..........    .+.... ..+.....+..+++++.+||..+|.+||++.+++++
T Consensus       196 ~~g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         196 SLGKMPYERFNNSETVE----KVSQGL-RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             cCCCCCcCcCCHHHHHH----HHhcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            8 999997655432222    222221 112223468899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.91  E-value=4.2e-24  Score=172.99  Aligned_cols=133  Identities=23%  Similarity=0.354  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++........   ....+++.|+|||++.+..++.+ +||||||+++|+|
T Consensus       156 ~givH~dlkp~Nili~~~~--~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el  232 (304)
T cd05101         156 QKCIHRDLAARNVLVTENN--VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEI  232 (304)
T ss_pred             CCeeecccccceEEEcCCC--cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998766  7999999998765332211   12235678999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||......    .....+.... .......++..+++|+.+||..+|.+|||+.++++.
T Consensus       233 ~~~g~~p~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         233 FTLGGSPYPGIPVE----ELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HcCCCCCcccCCHH----HHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            98 78888765432    2222222221 222234578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.91  E-value=3.7e-24  Score=169.40  Aligned_cols=132  Identities=25%  Similarity=0.401  Sum_probs=98.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .++|+|||++.........  ....++..|+|||.+.+..++.+ +|+||||+++|+|+
T Consensus       121 ~~i~H~di~p~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~l~  197 (260)
T cd05070         121 MNYIHRDLRSANILVGDGL--VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELV  197 (260)
T ss_pred             CCcccCCCccceEEEeCCc--eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcch-hhhHHHHHHHHHHH
Confidence            4799999999999998766  7999999998754332211  12234567999999877776655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||........    ...+.. ....+.....+..+.+|+.+||..+|.+|||+.++.+
T Consensus       198 ~~g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         198 TKGRVPYPGMNNREV----LEQVER-GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             hcCCCCCCCCCHHHH----HHHHHc-CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            9 8899976543322    222222 1222333457889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.91  E-value=3.1e-24  Score=172.86  Aligned_cols=138  Identities=25%  Similarity=0.347  Sum_probs=99.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .++|+|||+++.......   .....+++.|+|||.+.+..++.+ +|||||||++|+|
T Consensus       149 ~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el  225 (296)
T cd05051         149 LNFVHRDLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTK-SDVWAFGVTLWEI  225 (296)
T ss_pred             cCccccccchhceeecCCC--ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCcc-chhhhhHHHHHHH
Confidence            4899999999999998775  799999999875433221   122346778999999887776655 9999999999999


Q ss_pred             Hh--CCCCCCCCCChhHHHHHHHHHh--cccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV--GAYPFEDPEDPRNFKTTIQRIL--SVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~--g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++  +..||........+........  ......+....++.++.+|+.+||..+|.+|||+.++++.
T Consensus       226 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~  293 (296)
T cd05051         226 LTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF  293 (296)
T ss_pred             HhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence            98  7788876544333222221100  1111122233467899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.91  E-value=3.5e-24  Score=168.75  Aligned_cols=132  Identities=26%  Similarity=0.410  Sum_probs=96.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC---CcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~---~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||++..........   ....+..|+|||.+.+..++.+ +|+||||+++|+|
T Consensus       113 ~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~e~  189 (252)
T cd05084         113 KHCIHRDLAARNCLVTEKN--VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSE-SDVWSFGILLWEA  189 (252)
T ss_pred             CCccccccchheEEEcCCC--cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChH-HHHHHHHHHHHHH
Confidence            4899999999999998766  69999999987543221111   1122456999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||....... .....   .. ....+....++..+.+|+.+||..+|++|||+.++++
T Consensus       190 ~~~~~~p~~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         190 FSLGAVPYANLSNQQ-TREAI---EQ-GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HhCCCCCccccCHHH-HHHHH---Hc-CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            97 888886544322 11111   11 1122233357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.91  E-value=1.6e-24  Score=192.53  Aligned_cols=136  Identities=32%  Similarity=0.500  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC-------------------CCCCCCCcccCCCCCccccccCCc--
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-------------------LHSQPKSTVGTPAYIAPEVLSRKE--   59 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~-------------------~~~~~~~~~g~~~y~aPE~l~~~~--   59 (225)
                      +|||||||||.||+++...  .|||+|||+|....                   .....+..+||-.|+|||++.+..  
T Consensus       716 ~giIHRDLKP~NIFLd~~~--~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~  793 (1351)
T KOG1035|consen  716 QGIIHRDLKPRNIFLDSRN--SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN  793 (1351)
T ss_pred             CceeeccCCcceeEEcCCC--CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence            5899999999999999766  79999999997511                   011223458999999999997655  


Q ss_pred             -cCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCC--CCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           60 -YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        60 -~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                       |+.+ +|+||||||++||+   .||...   ..-..++..+.....+.+.  +.+--+.-..+|+.||+.||.+||||.
T Consensus       794 ~Yn~K-iDmYSLGIVlFEM~---yPF~Ts---MERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~  866 (1351)
T KOG1035|consen  794 KYNSK-IDMYSLGIVLFEML---YPFGTS---MERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTAT  866 (1351)
T ss_pred             cccch-hhhHHHHHHHHHHh---ccCCch---HHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHH
Confidence             6555 99999999999997   456432   2223344444444444441  112234567899999999999999999


Q ss_pred             HHhcCcccC
Q 027327          137 EIQKHPWFL  145 (225)
Q Consensus       137 eil~hp~~~  145 (225)
                      |+|++-||-
T Consensus       867 eLL~s~llp  875 (1351)
T KOG1035|consen  867 ELLNSELLP  875 (1351)
T ss_pred             HHhhccCCC
Confidence            999999986

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.91  E-value=4.8e-24  Score=168.70  Aligned_cols=132  Identities=25%  Similarity=0.438  Sum_probs=100.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++......... ....++..|+|||.+....++.+ +|+||||+++|+|++
T Consensus       123 ~~i~h~dl~~~nilv~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~DiwslG~~l~~l~~  199 (261)
T cd05148         123 QNSIHRDLAARNILVGEDL--VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTK-SDVWSFGILLYEMFT  199 (261)
T ss_pred             CCeeccccCcceEEEcCCc--eEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCch-hhHHHHHHHHHHHHc
Confidence            4899999999999998776  7999999998755332211 12235667999999987777655 999999999999998


Q ss_pred             -CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 -GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                       |+.||........+.    .+.. ....+.....+..+.+++.+||+.+|.+|||+.++++
T Consensus       200 ~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         200 YGQVPYPGMNNHEVYD----QITA-GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             CCCCCCCcCCHHHHHH----HHHh-CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence             899997654332222    2222 2233334568899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.91  E-value=6.6e-24  Score=166.88  Aligned_cols=133  Identities=26%  Similarity=0.414  Sum_probs=98.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+||+++.++  .+||+|||++..........  ...++..|+|||++.+..++.+ +|+||||+++|+++
T Consensus       112 ~~~~H~dl~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~ll~~~~  188 (250)
T cd05085         112 KNCIHRDLAARNCLVGENN--VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSE-SDVWSYGILLWETF  188 (250)
T ss_pred             CCeeecccChheEEEcCCC--eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCch-hHHHHHHHHHHHHh
Confidence            4899999999999998766  69999999986533222111  1234567999999987776655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||........    ...+.. .........++..+.+|+.+||..+|++||++.++++.
T Consensus       189 ~~g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         189 SLGVCPYPGMTNQQA----REQVEK-GYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE  247 (250)
T ss_pred             cCCCCCCCCCCHHHH----HHHHHc-CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            8 9999976543322    122221 12222233578999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.91  E-value=4.3e-24  Score=169.81  Aligned_cols=132  Identities=18%  Similarity=0.325  Sum_probs=98.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+|||++.++  .+|++|||.+..........  ...++..|+|||++.+..++.+ +|||||||++|+++
T Consensus       126 ~~iiH~dikp~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~ell  202 (266)
T cd05064         126 MGYVHKGLAAHKVLVNSDL--VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSA-SDVWSFGIVMWEVM  202 (266)
T ss_pred             CCEeeccccHhhEEEcCCC--cEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccch-hHHHHHHHHHHHHh
Confidence            4899999999999998766  79999999876432221111  2234678999999988777655 99999999999977


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||........    ...+.. ....+....++..+.+++.+||..+|.+||++.+|++
T Consensus       203 ~~g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         203 SYGERPYWDMSGQDV----IKAVED-GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             cCCCCCcCcCCHHHH----HHHHHC-CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            5 9999976554322    222222 2223344567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.91  E-value=7.7e-24  Score=170.83  Aligned_cols=137  Identities=22%  Similarity=0.328  Sum_probs=98.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .++|+|||+++.......   .....+++.|+|||...+..++.+ +|+|||||++|+|
T Consensus       149 ~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~DiwSlG~~l~el  225 (296)
T cd05095         149 LNFVHRDLATRNCLVGKNY--TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTA-SDVWAFGVTLWEI  225 (296)
T ss_pred             CCeecccCChheEEEcCCC--CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccch-hhhhHHHHHHHHH
Confidence            4899999999999998766  799999999875433221   112234578999998877777655 9999999999999


Q ss_pred             Hh--CCCCCCCCCChhHHHHHHHHHhc--ccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV--GAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~--g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++  |..||..................  .....+....++..+.+|+.+||..+|.+||++.++++
T Consensus       226 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         226 LTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            98  77888765443332222111111  11122333457789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.91  E-value=4.5e-24  Score=169.47  Aligned_cols=133  Identities=23%  Similarity=0.408  Sum_probs=100.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++....... ..  ...++..|+|||.+.+..++.+ +|+||||+++|+|
T Consensus       125 ~~i~H~di~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~-~Dv~slG~~l~~l  201 (266)
T cd05033         125 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSA-SDVWSFGIVMWEV  201 (266)
T ss_pred             CCcccCCCCcceEEEcCCC--CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccc-cchHHHHHHHHHH
Confidence            4899999999999998766  799999999986542111 11  1234567999999987777655 8999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.......    ....+.. ....+....++..+.+|+.+||+.+|.+||++.+++++
T Consensus       202 ~~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         202 MSYGERPYWDMSNQD----VIKAVED-GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HccCCCCCCCCCHHH----HHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            97 999997654322    2222222 12223334578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.91  E-value=4.7e-24  Score=168.87  Aligned_cols=133  Identities=24%  Similarity=0.354  Sum_probs=96.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+|||++.++  .+||+|||+++......     ......++..|+|||.+.+..++.+ +|||||||++|
T Consensus       117 ~~i~H~dlk~~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~  193 (262)
T cd05058         117 KKFVHRDLAARNCMLDESF--TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTK-SDVWSFGVLLW  193 (262)
T ss_pred             CCccccccCcceEEEcCCC--cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchH-HHHHHHHHHHH
Confidence            4799999999999998766  79999999987543211     1112235678999999887777655 99999999999


Q ss_pred             HHHhC-CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           76 VMLVG-AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        76 ~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +|++| .+||.......    ....+.... ..+....++..+.+++.+||..+|++||++.++++.
T Consensus       194 el~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         194 ELMTRGAPPYPDVDSFD----ITVYLLQGR-RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HHHcCCCCCCCCCCHHH----HHHHHhcCC-CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99995 56665543222    222222221 122223468899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.91  E-value=5.9e-24  Score=167.25  Aligned_cols=133  Identities=29%  Similarity=0.428  Sum_probs=98.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+||+++.++  .+||+|||++.........   .....+..|+|||.+.+..++.. +|+||||+++|+|
T Consensus       112 ~~i~h~di~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~i~~~l  188 (251)
T cd05041         112 KNCIHRDLAARNCLVGENN--VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSE-SDVWSYGILLWET  188 (251)
T ss_pred             CCEehhhcCcceEEEcCCC--cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcc-hhHHHHHHHHHHH
Confidence            4799999999999998766  7999999998754322111   11223556999999887776544 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.........    ..+. .....+....++.++.+++.+||..+|.+|||+.++++.
T Consensus       189 ~t~~~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~  248 (251)
T cd05041         189 FSLGDTPYPGMSNQQTR----ERIE-SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE  248 (251)
T ss_pred             HhccCCCCccCCHHHHH----HHHh-cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            98 88899765432211    1121 122223334578899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.91  E-value=5.9e-24  Score=165.43  Aligned_cols=137  Identities=40%  Similarity=0.641  Sum_probs=107.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      ||+|+||+|.||+++.++  .++|+|||.+.............++..|++||.+.+..++. ++|+||||++++++++|.
T Consensus       107 ~i~h~~i~~~ni~~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~-~~Di~slG~~l~~l~~~~  183 (244)
T smart00220      107 GIIHRDLKPENILLDEDG--HVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGK-AVDVWSLGVILYELLTGK  183 (244)
T ss_pred             CeecCCcCHHHeEECCCC--cEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCc-hhhHHHHHHHHHHHHhCC
Confidence            799999999999998775  79999999988665544445566888999999998767765 499999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCC-CCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      .||........   ................. ++.++.+++.+||..+|.+||++.++++||||
T Consensus       184 ~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      184 PPFPGDDQLLE---LFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CCCCCCCcHHH---HHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            99976333322   22222222222222111 78899999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.91  E-value=7.1e-24  Score=167.73  Aligned_cols=131  Identities=20%  Similarity=0.309  Sum_probs=94.6

Q ss_pred             CceEecCCCCCcEEEcCCCC------CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA------PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~------~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      +||+||||||+||+++.++.      +.++++|||++.....   .....+++.|+|||++.+....+.++|+||||+++
T Consensus       119 ~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l  195 (258)
T cd05078         119 KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTL  195 (258)
T ss_pred             CCeecCCCccceEEEecccccccCCCceEEecccccccccCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHH
Confidence            58999999999999976542      1379999999864432   22345788999999997644334459999999999


Q ss_pred             HHHHhCC-CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           75 YVMLVGA-YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        75 ~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |+|++|. .||..... ......    .......+.  ..+.++.+|+.+||+.+|++|||+.++++.
T Consensus       196 ~~l~~g~~~~~~~~~~-~~~~~~----~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         196 WEIFSGGDKPLSALDS-QKKLQF----YEDRHQLPA--PKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHcCCCCChhhccH-HHHHHH----HHccccCCC--CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            9999985 56544332 211111    111222222  356889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.91  E-value=3.8e-24  Score=173.54  Aligned_cols=133  Identities=23%  Similarity=0.347  Sum_probs=98.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+||+++.++  .+||+|||+++........   ....+++.|+|||++.+..++.+ +|+|||||++|+|
T Consensus       159 ~gi~H~dlkp~Nill~~~~--~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~el  235 (307)
T cd05098         159 KKCIHRDLAARNVLVTEDN--VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEI  235 (307)
T ss_pred             CCcccccccHHheEEcCCC--cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcH-HHHHHHHHHHHHH
Confidence            4899999999999998766  7999999998754322111   11224568999999987777555 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||..... ..   ....+.. .........++.++.+|+.+||..+|.+|||+.+++++
T Consensus       236 ~~~g~~p~~~~~~-~~---~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         236 FTLGGSPYPGVPV-EE---LFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HcCCCCCCCcCCH-HH---HHHHHHc-CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            98 8888865432 22   2222222 22223334578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.91  E-value=6.2e-24  Score=169.90  Aligned_cols=132  Identities=22%  Similarity=0.374  Sum_probs=99.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+||+++.++  .+||+|||+++.......   .....++..|+|||++.+..++.+ +|||||||++|++
T Consensus       136 ~~i~H~di~p~nil~~~~~--~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~~l~el  212 (280)
T cd05043         136 RGVIHKDIAARNCVIDEEL--QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSA-SDVWSFGVLLWEL  212 (280)
T ss_pred             CCEeecccCHhhEEEcCCC--cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCch-hhHHHhHHHHHHH
Confidence            4799999999999998766  799999999975432221   112245667999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |+.||....... +   ...+. .....+....++..+.+++.+||..+|++|||+.++++
T Consensus       213 ~~~g~~p~~~~~~~~-~---~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         213 MTLGQTPYVEIDPFE-M---AAYLK-DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             hcCCCCCcCcCCHHH-H---HHHHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            98 999997653322 2   22222 22233333457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.91  E-value=6.6e-24  Score=171.87  Aligned_cols=133  Identities=21%  Similarity=0.421  Sum_probs=99.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++........   ....++..|+|||.+.+..++.+ +|||||||++|+|
T Consensus       128 ~~ivH~dikp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~DiwslG~~l~el  204 (303)
T cd05110         128 RRLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ-SDVWSYGVTIWEL  204 (303)
T ss_pred             cCeeccccccceeeecCCC--ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChH-HHHHHHHHHHHHH
Confidence            4899999999999998766  6999999999754332221   12235678999999987777655 8999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+... ......    .......+.....+..+.+++.+||..+|++||++.++++.
T Consensus       205 ~t~g~~p~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         205 MTFGGKPYDGIPT-REIPDL----LEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HhCCCCCCCCCCH-HHHHHH----HHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            97 8999976432 222222    22222333334578899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=8.5e-24  Score=166.92  Aligned_cols=131  Identities=25%  Similarity=0.424  Sum_probs=98.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      .||+||||||+||+++.++  .+||+|||+++.......  ....+..|+|||.+....+..+ +|+||||+++|++++ 
T Consensus       121 ~~i~H~di~p~Nili~~~~--~~~l~d~g~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~-~Di~slG~il~~l~~~  195 (256)
T cd05039         121 KNFVHRDLAARNVLVSEDL--VAKVSDFGLAKEASQGQD--SGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSF  195 (256)
T ss_pred             CCccchhcccceEEEeCCC--CEEEcccccccccccccc--cCCCcccccCchhhcCCcCCcH-HHHHHHHHHHHHHHhc
Confidence            4899999999999998776  699999999986532222  2334567999999977766544 999999999999997 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |..||....... .   ...+.. .+.......+++.+.++|.+||..+|.+|||+.++++.
T Consensus       196 g~~p~~~~~~~~-~---~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  252 (256)
T cd05039         196 GRVPYPRIPLKD-V---VPHVEK-GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ  252 (256)
T ss_pred             CCCCCCCCCHHH-H---HHHHhc-CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            999997654322 2   222211 11222233578999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.91  E-value=8.8e-24  Score=167.27  Aligned_cols=132  Identities=24%  Similarity=0.383  Sum_probs=99.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+||+++.++  .++|+|||++.........  ....++..|+|||.+.+..++.+ +|+||||+++|+++
T Consensus       121 ~~i~H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~-~Di~slG~~l~el~  197 (260)
T cd05067         121 KNYIHRDLRAANILVSETL--CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK-SDVWSFGILLTEIV  197 (260)
T ss_pred             CCeecccccHHhEEEcCCC--CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcc-cchHHHHHHHHHHH
Confidence            4899999999999998776  7999999998754422211  12235678999999977776544 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||...........    +. .....+.....+.++.+++.+||..+|++||++++++.
T Consensus       198 ~~g~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         198 TYGRIPYPGMTNPEVIQN----LE-RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             hCCCCCCCCCChHHHHHH----HH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            8 9999976554332221    11 12222333457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=1.6e-24  Score=187.10  Aligned_cols=130  Identities=25%  Similarity=0.421  Sum_probs=106.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC---CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~---~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .+|||||-.+||||+.+.  .|||+|||+++........+   ...-.++|||||.|....|++. +||||+||++||++
T Consensus       623 ~FVHRDLATRNCLVge~l--~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTte-SDVWs~GVvLWEIF  699 (774)
T KOG1026|consen  623 HFVHRDLATRNCLVGENL--VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTE-SDVWSFGVVLWEIF  699 (774)
T ss_pred             cccccchhhhhceeccce--EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccch-hhhhhhhhhhhhhh
Confidence            579999999999998777  79999999998544333322   2234678999999999999877 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      + |..||.+.++.+    .++.+..... ++.+.+++.++.+|+..||+.+|++||++++|-
T Consensus       700 syG~QPy~glSn~E----VIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  700 SYGKQPYYGLSNQE----VIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             ccccCcccccchHH----HHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            7 999999887754    3344444444 666678999999999999999999999999974

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.1e-23  Score=169.88  Aligned_cols=137  Identities=23%  Similarity=0.310  Sum_probs=97.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+||+++.++  .+||+|||++.........   ....++..|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       148 ~~i~H~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwSlG~~l~el  224 (295)
T cd05097         148 LNFVHRDLATRNCLVGNHY--TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTA-SDVWAFGVTLWEM  224 (295)
T ss_pred             cCeeccccChhhEEEcCCC--cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCch-hhHHHHHHHHHHH
Confidence            4899999999999998766  6999999998754322211   12234678999999887777555 9999999999999


Q ss_pred             Hh--CCCCCCCCCChhHHHHHHHHHhc--ccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV--GAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~--g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++  +..||..................  ...........+..+.+|+.+||..+|.+|||+.++++
T Consensus       225 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         225 FTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            88  66788765543322222111111  11111222346889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.91  E-value=7.6e-24  Score=173.77  Aligned_cols=134  Identities=22%  Similarity=0.338  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++........   ....++..|+|||++.+..++.+ +||||||+++|+|
T Consensus       153 ~givH~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  229 (334)
T cd05100         153 QKCIHRDLAARNVLVTEDN--VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLLWEI  229 (334)
T ss_pred             CCeeccccccceEEEcCCC--cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCch-hhhHHHHHHHHHH
Confidence            4899999999999998766  7999999998754332211   11234567999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      ++ |..||.......    ....+... ...+....++.++.+|+.+||..+|.+|||+.+++++.
T Consensus       230 ~~~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l  290 (334)
T cd05100         230 FTLGGSPYPGIPVEE----LFKLLKEG-HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL  290 (334)
T ss_pred             HhcCCCCCCCCCHHH----HHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence            98 888997654322    22222222 12222335788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.91  E-value=7e-24  Score=177.80  Aligned_cols=134  Identities=28%  Similarity=0.463  Sum_probs=100.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       256 ~~ivH~dikp~Nill~~~~--~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwSlGvil~el  332 (400)
T cd05105         256 KNCVHRDLAARNVLLAQGK--IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTL-SDVWSYGILLWEI  332 (400)
T ss_pred             CCeeCCCCChHhEEEeCCC--EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCch-hhHHHHHHHHHHH
Confidence            4799999999999998766  699999999875432221   123346778999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||........+...   + ......+....++..+.+++.+||..+|++||++.++.+.
T Consensus       333 lt~g~~P~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~  393 (400)
T cd05105         333 FSLGGTPYPGMIVDSTFYNK---I-KSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI  393 (400)
T ss_pred             HHCCCCCCcccchhHHHHHH---H-hcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence            97 99999764432222221   1 2222233334678899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.91  E-value=5.2e-24  Score=190.23  Aligned_cols=134  Identities=26%  Similarity=0.404  Sum_probs=98.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-------------------CCCCCcccCCCCCccccccCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-------------------SQPKSTVGTPAYIAPEVLSRKEYD   61 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-------------------~~~~~~~g~~~y~aPE~l~~~~~~   61 (225)
                      .||+||||||+|||++.++  .+||+|||+++.....                   ......+||+.|+|||++.+..++
T Consensus       132 ~GIIHRDLKPeNILLd~dg--~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S  209 (932)
T PRK13184        132 KGVLHRDLKPDNILLGLFG--EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPAS  209 (932)
T ss_pred             CCccccCCchheEEEcCCC--CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCC
Confidence            4899999999999998776  6999999998754110                   011124689999999999888776


Q ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           62 GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        62 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      .+ +|||||||++|+|++|+.||.........   ................+++.+.+++.+||..+|++|++..+.+.
T Consensus       210 ~k-SDIWSLGVILyELLTG~~PF~~~~~~ki~---~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        210 ES-TDIYALGVILYQMLTLSFPYRRKKGRKIS---YRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             cH-hHHHHHHHHHHHHHHCCCCCCCcchhhhh---hhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            55 99999999999999999999764332111   11111111122233467889999999999999999987655443

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.91  E-value=1.9e-23  Score=166.22  Aligned_cols=136  Identities=24%  Similarity=0.362  Sum_probs=94.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCC-------ccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRK-------EYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~-------~~~~~~~Diwsl   70 (225)
                      .||+||||||+|||++.++  .+||+|||++......   .......++..|+|||++...       .+ +.++|||||
T Consensus       118 ~~i~H~dikp~nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~-~~~~Diwsl  194 (268)
T cd05086         118 HNFLHSDLALRNCFLTSDL--TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQ-TKPSNVWAL  194 (268)
T ss_pred             CCeeccCCccceEEEcCCc--cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCC-CCcchhHHH
Confidence            4799999999999998766  7999999997643221   112234678899999998532       22 344899999


Q ss_pred             HHHHHHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           71 GVTLYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        71 G~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ||++|+|++ |..||........+...................++..+.+++.+|| .+|.+||++.++++
T Consensus       195 G~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         195 GVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            999999996 5678866554433333322211111111112347888999999999 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.8e-24  Score=175.42  Aligned_cols=145  Identities=30%  Similarity=0.427  Sum_probs=112.1

Q ss_pred             eEecCCCCCcEEEc-CCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCC---ccCCCcccHHHH
Q 027327            3 ICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRK---EYDGKIADVWSC   70 (225)
Q Consensus         3 ivHrdlkp~Nil~~-~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~---~~~~~~~Diwsl   70 (225)
                      |||-||||.|||+. .+..+.+||+|||+++.+.....        .....||.+|++||++.-.   +-.+.++||||+
T Consensus       591 IIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSv  670 (775)
T KOG1151|consen  591 IIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSV  670 (775)
T ss_pred             eeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEee
Confidence            89999999999984 34445799999999987654332        2345799999999997532   222445999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           71 GVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+|+|.++.|+.||........+.....-+......+|..+.++.++++||++||.+--+.|..+.++-.||||...
T Consensus       671 GVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  671 GVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             ehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence            99999999999999765543333322222333455667777899999999999999999999999999999999864

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.90  E-value=8.4e-24  Score=169.57  Aligned_cols=137  Identities=26%  Similarity=0.395  Sum_probs=98.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||+++.......    .....++..|+|||++.+..++.+ +|||||||++|+
T Consensus       128 ~gi~H~dlkp~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~il~e  204 (284)
T cd05079         128 RQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIA-SDVWSFGVTLYE  204 (284)
T ss_pred             CCeeecccchheEEEcCCC--CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCcc-ccchhhhhhhhh
Confidence            4899999999999998766  699999999875443222    123346678999999887776655 999999999999


Q ss_pred             HHhCCCCCCCCCC-----------hhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLVGAYPFEDPED-----------PRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++++.|+.....           ......... ........+....++..+.+|+.+||+.+|.+|||+.+++++
T Consensus       205 llt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         205 LLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR-VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             hhcCCCCCccccchhhhhcccccccccHHHHHH-HHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            9998776532111           001111111 111122233344588999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.90  E-value=1.3e-23  Score=165.78  Aligned_cols=130  Identities=23%  Similarity=0.421  Sum_probs=98.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      .|++||||||+||+++.++  .+||+|||++......  ......+..|+|||.+.+..++.+ +|+||||+++|+|++ 
T Consensus       119 ~~~~H~dl~p~nili~~~~--~~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~~l~el~~~  193 (254)
T cd05083         119 KKLVHRDLAARNILVSEDG--VAKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKHKKFSSK-SDVWSYGVLLWEVFSY  193 (254)
T ss_pred             CCeeccccCcceEEEcCCC--cEEECCCccceecccc--CCCCCCCceecCHHHhccCCcCch-hhHHHHHHHHHHHHhC
Confidence            4899999999999998766  6999999998753321  122334567999999877777655 899999999999997 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |+.||........    ...+.. .........++..+.+|+.+||+.+|.+||++.+++.
T Consensus       194 g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         194 GRAPYPKMSLKEV----KECVEK-GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             CCCCCccCCHHHH----HHHHhC-CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999976544322    122222 2222233457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.90  E-value=1.3e-23  Score=173.09  Aligned_cols=134  Identities=25%  Similarity=0.423  Sum_probs=99.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||++........   .....++..|+|||.+.+..++.+ +|+||||+++|+|
T Consensus       198 ~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el  274 (343)
T cd05103         198 RKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEI  274 (343)
T ss_pred             CCeecCCCccCeEEEcCCC--cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998766  799999999875432211   112234567999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||..............   .. ...+.....++++.+++.+||..+|.+|||+.++++|
T Consensus       275 ~~~g~~p~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         275 FSLGASPYPGVKIDEEFCRRLK---EG-TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HHCCCCCCCCccccHHHHHHHh---cc-CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            96 9999976543332222221   11 1112222367899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.90  E-value=1.5e-23  Score=166.95  Aligned_cols=133  Identities=20%  Similarity=0.375  Sum_probs=98.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+||+++.+.  .+||+|||+++.......   .....+++.|++||.+.+..++.+ +|||||||++|+|
T Consensus       132 ~~i~H~dikp~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-sDi~slG~il~el  208 (273)
T cd05074         132 KNFIHRDLAARNCMLNENM--TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTH-SDVWAFGVTMWEI  208 (273)
T ss_pred             CCEeecccchhhEEEcCCC--CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchh-hhhHHHHHHHHHH
Confidence            4899999999999998666  699999999875433221   122235678999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.......    ....+.... ........+..+.+++.+||..+|.+|||+.+++++
T Consensus       209 ~~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         209 MTRGQTPYAGVENSE----IYNYLIKGN-RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             hhCCCCCCCCCCHHH----HHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            98 889987644322    222222211 112223477899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.90  E-value=2.5e-23  Score=163.91  Aligned_cols=132  Identities=27%  Similarity=0.423  Sum_probs=99.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCC--cccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS--TVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+||+++.++  .++|+|||++...........  ..+++.|+|||.+.+..++.+ +|+||||+++|+|+
T Consensus       122 ~~~~h~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~-~Di~slG~i~~~l~  198 (258)
T smart00219      122 KNFIHRDLAARNCLVGENL--VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSK-SDVWSFGVLLWEIF  198 (258)
T ss_pred             CCeeecccccceEEEccCC--eEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcc-hhHHHHHHHHHHHH
Confidence            4899999999999998776  799999999876543322221  236788999999976666544 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||........    ...+.... ..+....++..+.+++.+||..+|.+|||+.++++
T Consensus       199 ~~g~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      199 TLGESPYPGMSNEEV----LEYLKKGY-RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             hCCCCCCCCCCHHHH----HHHHhcCC-CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            8 7888876433222    22222222 22223347899999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.3e-24  Score=165.34  Aligned_cols=143  Identities=28%  Similarity=0.428  Sum_probs=107.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      ||+||||||.|.|++++.  .+||||||+++........  ...+.|-+|+|||++.+...++.+.||||.|||+.|++.
T Consensus       176 ~ILHRDIKPGNLLVNSNC--vLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLg  253 (449)
T KOG0664|consen  176 NILHRDIKPGNLLVNSNC--ILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQ  253 (449)
T ss_pred             chhhccCCCccEEeccCc--eEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHh
Confidence            799999999999998776  7999999999865433322  233678899999999987766666999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHH-------------------HhcccccCCCC---------CCCCHHHHHHHHhhcccCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQR-------------------ILSVHYSIPGY---------VRVSLECRHLLSRIFVADPEK  131 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~---------~~~~~~~~~li~~~l~~dP~~  131 (225)
                      .+..|...++...+.-+..-                   +++.....|..         ..-..+...++.++|..+|.+
T Consensus       254 RrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dk  333 (449)
T KOG0664|consen  254 RKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDK  333 (449)
T ss_pred             hhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcc
Confidence            99999876655443322211                   11111111111         123346789999999999999


Q ss_pred             CCCHHHHhcCcccCc
Q 027327          132 RITIPEIQKHPWFLK  146 (225)
Q Consensus       132 R~s~~eil~hp~~~~  146 (225)
                      |++..+++.|++..+
T Consensus       334 ris~~~A~~~~~~~e  348 (449)
T KOG0664|consen  334 RISVEEALQHRYLEE  348 (449)
T ss_pred             cccHhhhcccccccc
Confidence            999999999998854

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=159.71  Aligned_cols=87  Identities=37%  Similarity=0.644  Sum_probs=72.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc----CCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS----RKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~----~~~~~~~~~DiwslG~il~~   76 (225)
                      +.|||||+||+||||+..+  +||+||||++......-......|...|||||.+.    +..|+-+ +||||||+++.|
T Consensus       168 L~vIHRDvKPsNiLIn~~G--qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vk-sDvWSLGItmiE  244 (282)
T KOG0984|consen  168 LSVIHRDVKPSNILINYDG--QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVK-SDVWSLGITMIE  244 (282)
T ss_pred             hhhhhccCCcceEEEccCC--cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceee-hhhhhhhhhhhh
Confidence            4689999999999998777  79999999998765544434467888999999984    3456655 999999999999


Q ss_pred             HHhCCCCCCCCCCh
Q 027327           77 MLVGAYPFEDPEDP   90 (225)
Q Consensus        77 ll~g~~pf~~~~~~   90 (225)
                      |.++++||..+..+
T Consensus       245 lA~lr~PY~~w~tp  258 (282)
T KOG0984|consen  245 MAILRFPYESWGTP  258 (282)
T ss_pred             hhhccccccccCCH
Confidence            99999999876654

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.90  E-value=2.1e-23  Score=165.92  Aligned_cols=133  Identities=25%  Similarity=0.413  Sum_probs=99.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+||+++.++  .+||+|||+++.........  ...++..|+|||.+....++.+ +|+||||+++|+++
T Consensus       126 ~~~~H~dl~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~  202 (270)
T cd05056         126 KRFVHRDIAARNVLVSSPD--CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL  202 (270)
T ss_pred             CCeeccccChheEEEecCC--CeEEccCceeeecccccceecCCCCccccccChhhhccCCCCch-hhhHHHHHHHHHHH
Confidence            4899999999999998766  79999999987543332211  1224467999999877777655 99999999999998


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||..........    .+... ...+....++..+.+++.+||..+|.+|||+.+++..
T Consensus       203 ~~g~~pf~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         203 MLGVKPFQGVKNNDVIG----RIENG-ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HcCCCCCCCCCHHHHHH----HHHcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6 999997655433222    22221 1223334678999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.90  E-value=1.6e-23  Score=166.46  Aligned_cols=132  Identities=22%  Similarity=0.424  Sum_probs=98.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC----CcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK----STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~----~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++..........    ....+..|+|||++.+..++.+ +|+|||||++|+
T Consensus       126 ~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Dv~slG~il~e  202 (268)
T cd05063         126 MNYVHRDLAARNILVNSNL--ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSA-SDVWSFGIVMWE  202 (268)
T ss_pred             CCeeccccchhhEEEcCCC--cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChH-hHHHHHHHHHHH
Confidence            4899999999999998766  79999999987543222111    1123457999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++ |..||.......    ....+.. ....+.....+..+.+++.+||..+|.+||++.++++
T Consensus       203 ll~~g~~p~~~~~~~~----~~~~i~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         203 VMSFGERPYWDMSNHE----VMKAIND-GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHhCCCCCCCcCCHHH----HHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            997 999997654322    2222222 2233444457889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.90  E-value=1.5e-23  Score=167.94  Aligned_cols=138  Identities=24%  Similarity=0.365  Sum_probs=97.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++.........    ....++..|+|||++.+..++.+ +|+|||||++|+
T Consensus       127 ~~i~H~dlkp~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~e  203 (284)
T cd05081         127 KRYVHRDLATRNILVESEN--RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYE  203 (284)
T ss_pred             CCceeccCCHhhEEECCCC--eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChH-HHHHHHHHHHHH
Confidence            4899999999999998766  6999999998865332221    11123456999999987777654 999999999999


Q ss_pred             HHhCCCCCCCCCChh-----------HHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLVGAYPFEDPEDPR-----------NFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~g~~pf~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++|..++.......           ................+....++..+.+|+.+||..+|++|||+.++++.
T Consensus       204 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  279 (284)
T cd05081         204 LFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ  279 (284)
T ss_pred             HhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            999877764322110           00001111222222334445678899999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.90  E-value=2.3e-23  Score=164.92  Aligned_cols=132  Identities=27%  Similarity=0.409  Sum_probs=98.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+||+++..+  .+||+|||.+.........  ....++..|+|||++....++.+ +|+|||||++|+++
T Consensus       121 ~~i~H~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~~l~  197 (260)
T cd05073         121 RNYIHRDLRAANILVSASL--VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK-SDVWSFGILLMEIV  197 (260)
T ss_pred             CCccccccCcceEEEcCCC--cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCcc-ccchHHHHHHHHHH
Confidence            4799999999999998766  7999999998754322211  12235567999999987666555 89999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||.........    ..+. ..+..+.....+.++.+++.+||..+|++||++.++++
T Consensus       198 t~g~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         198 TYGRIPYPGMSNPEVI----RALE-RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             hcCCCCCCCCCHHHHH----HHHh-CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            8 99999765443222    2221 22233333467889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.90  E-value=1.6e-23  Score=165.25  Aligned_cols=133  Identities=24%  Similarity=0.411  Sum_probs=98.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++||||||+||+++.++  .+||+|||++........  .....++..|+|||.+.+..++.+ +|+||||+++|+|+
T Consensus       119 ~~i~h~dl~p~ni~i~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~-~Dv~slG~~l~el~  195 (256)
T cd05112         119 SNVIHRDLAARNCLVGENQ--VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSK-SDVWSFGVLMWEVF  195 (256)
T ss_pred             CCccccccccceEEEcCCC--eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChH-HHHHHHHHHHHHHH
Confidence            4799999999999998666  799999999875432211  112234568999999987776654 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||.......    ....+.... ........+..+.+|+.+||+.+|.+|||+.+++++
T Consensus       196 ~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         196 SEGKTPYENRSNSE----VVETINAGF-RLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             cCCCCCCCcCCHHH----HHHHHhCCC-CCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            8 999997644322    222222211 111122368899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.90  E-value=1.7e-23  Score=168.05  Aligned_cols=132  Identities=23%  Similarity=0.378  Sum_probs=98.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++||||||+||+++.++  .+||+|||++........   ......+..|+|||.+.+..++.+ +|+|||||++|+|
T Consensus       149 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el  225 (288)
T cd05050         149 RKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTE-SDVWAYGVVLWEI  225 (288)
T ss_pred             CCeecccccHhheEecCCC--ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCch-hHHHHHHHHHHHH
Confidence            4799999999999998766  799999999875432221   112234667999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||.+.....    ....+..... .+....++.++.+|+.+||+.+|.+|||+.++++
T Consensus       226 ~~~~~~p~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         226 FSYGMQPYYGMAHEE----VIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HhCCCCCCCCCCHHH----HHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            97 888987654332    2222222221 1223357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.90  E-value=2.8e-23  Score=165.04  Aligned_cols=134  Identities=25%  Similarity=0.411  Sum_probs=98.4

Q ss_pred             CceEecCCCCCcEEEcCCC---CCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK---APRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~---~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      +|++|+||||+||+++.+.   ...+||+|||+++.......   .....++..|+|||.+.+..++.+ +|||||||++
T Consensus       125 ~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il  203 (269)
T cd05044         125 MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQ-SDVWSFGVLM  203 (269)
T ss_pred             CCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccc-hhHHHHHHHH
Confidence            4799999999999997644   12599999999875432211   112345678999999987777544 9999999999


Q ss_pred             HHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           75 YVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        75 ~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |+|++ |..||........    ...+.. .........++..+.+|+.+||..+|.+||++.++++
T Consensus       204 ~ellt~g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         204 WEILTLGQQPYPALNNQEV----LQHVTA-GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHcCCCCCcccCHHHH----HHHHhc-CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            99998 9999975443221    222211 1122223457889999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=2.2e-23  Score=164.88  Aligned_cols=132  Identities=25%  Similarity=0.368  Sum_probs=98.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||++.........  .....+..|+|||.+.+..++.+ +|+||||+++|+++
T Consensus       122 ~~i~h~di~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~il~~l~  198 (261)
T cd05034         122 RNYIHRDLAARNILVGENL--VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIK-SDVWSFGILLTEIV  198 (261)
T ss_pred             CCcccCCcchheEEEcCCC--CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCch-hHHHHHHHHHHHHH
Confidence            4899999999999998776  7999999998754322111  12234567999999987776544 89999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||.+.......    ..+.. .+..+.....+.++.+++.+||..+|.+||++.++++
T Consensus       199 t~g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         199 TYGRVPYPGMTNREVL----EQVER-GYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             hCCCCCCCCCCHHHHH----HHHHc-CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            8 99999765443222    22222 2222333456889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.90  E-value=2.9e-23  Score=174.06  Aligned_cols=134  Identities=26%  Similarity=0.427  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++......   ......++..|+|||.+.+..+..+ +|+||||+++|+|
T Consensus       258 ~~ivHrdlkp~NiLl~~~~--~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslGvil~e~  334 (401)
T cd05107         258 KNCVHRDLAARNVLICEGK--LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTL-SDVWSFGILLWEI  334 (401)
T ss_pred             CCcCcccCCcceEEEeCCC--EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcH-hHHHHHHHHHHHH
Confidence            4799999999999998765  79999999987543221   1123356788999999987777555 8999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||............+.    .....+.+..++.++.+|+.+||..+|.+||++.+|++.
T Consensus       335 l~~g~~P~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         335 FTLGGTPYPELPMNEQFYNAIK----RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHcCCCCCCCCCchHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            98 8899976544333222221    122222334578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.90  E-value=3.4e-23  Score=164.69  Aligned_cols=132  Identities=23%  Similarity=0.427  Sum_probs=98.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCC---cc---cCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS---TV---GTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~---~~---g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      .|++||||||+||+++.+.  .+||+|||++...........   ..   .+..|+|||.+.+..++.+ +|+|||||++
T Consensus       125 ~g~~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~DvwslG~~l  201 (269)
T cd05065         125 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVM  201 (269)
T ss_pred             CCEeecccChheEEEcCCC--cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccch-hhhhhhHHHH
Confidence            4899999999999998766  799999999875433221111   11   2347999999987777655 9999999999


Q ss_pred             HHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           75 YVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        75 ~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++++ |..||.......    ....+. .....+....++..+.+++.+||..+|.+||++.+++.
T Consensus       202 ~e~l~~g~~p~~~~~~~~----~~~~i~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         202 WEVMSYGERPYWDMSNQD----VINAIE-QDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHhcCCCCCCCCCCHHH----HHHHHH-cCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99886 999997654322    222222 22333444467889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.90  E-value=3.9e-23  Score=164.77  Aligned_cols=134  Identities=22%  Similarity=0.442  Sum_probs=100.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++..+  .++|+|||+++......  ......++..|+|||.+.+..+..+ +||||||+++|+|+
T Consensus       136 ~~i~H~dlkp~Nili~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~~l~  212 (275)
T cd05046         136 ARFVHRDLAARNCLVSSQR--EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTK-SDVWSFGVLMWEVF  212 (275)
T ss_pred             cCcccCcCccceEEEeCCC--cEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCch-hhHHHHHHHHHHHH
Confidence            4799999999999998766  79999999986432221  1223356778999999877666544 89999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||.......    ............+....++..+.+++.+||..+|.+|||+.+++.+
T Consensus       213 ~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         213 TQGELPFYGLSDEE----VLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             hCCCCCccccchHH----HHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            8 788997644322    2223332333333334578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.90  E-value=3e-23  Score=164.91  Aligned_cols=132  Identities=23%  Similarity=0.413  Sum_probs=98.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC----CcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK----STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~----~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|++||||||+|||++.++  .+||+|||++..........    ...++..|+|||.+.+..++.+ +|+|||||++|+
T Consensus       125 ~~i~h~dlkp~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~~l~e  201 (267)
T cd05066         125 MGYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWE  201 (267)
T ss_pred             CCEeehhhchhcEEECCCC--eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCch-hhhHHHHHHHHH
Confidence            4899999999999998766  79999999987543322111    1123567999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      +++ |..||..........    .+.. ....+....++..+.+++.+||+.+|.+||++.++++
T Consensus       202 ll~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         202 VMSYGERPYWEMSNQDVIK----AIEE-GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HhcCCCCCcccCCHHHHHH----HHhC-CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            886 999997654432222    2222 1233444457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=5.3e-23  Score=164.47  Aligned_cols=132  Identities=26%  Similarity=0.405  Sum_probs=98.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCC---cccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~---~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++..........   ..++..|+|||.+....++.. +|+||||+++|++
T Consensus       128 ~~i~H~di~p~nil~~~~~--~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~el  204 (279)
T cd05057         128 KRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHK-SDVWSYGVTVWEL  204 (279)
T ss_pred             CCEEecccCcceEEEcCCC--eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCch-hhHHHHHHHHHHH
Confidence            4899999999999998766  699999999976543322111   123567999999877666655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||.......    ....+... ...+.....+..+.+++.+||..+|.+||++.++++
T Consensus       205 ~~~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         205 MTFGAKPYEGIPAVE----IPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             hcCCCCCCCCCCHHH----HHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            98 999997654322    22222222 222333347789999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.89  E-value=2.5e-23  Score=166.38  Aligned_cols=137  Identities=26%  Similarity=0.387  Sum_probs=99.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +||+||||||+||+++.++  .++|+|||++.........    ....++..|+|||.+.+..++.. +|+||||+++|+
T Consensus       128 ~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~Di~slG~~l~e  204 (284)
T cd05038         128 QRYIHRDLAARNILVESED--LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSA-SDVWSFGVTLYE  204 (284)
T ss_pred             CCeecCCCCHHhEEEcCCC--CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcc-cchHHHhhhhhe
Confidence            4899999999999998775  7999999998765422211    11234567999999977776655 899999999999


Q ss_pred             HHhCCCCCCCCCChh----------HHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLVGAYPFEDPEDPR----------NFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~g~~pf~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++|..||.......          ................+....++.++.+|+.+||..+|.+|||+.++++
T Consensus       205 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         205 LFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             eeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            999999986533211          0011122222222333334457789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=6.2e-24  Score=168.35  Aligned_cols=132  Identities=33%  Similarity=0.523  Sum_probs=95.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ++|+|++|+++|||++.++  .+||+|||++........   .........|+|||.+.+..++.+ +||||||+++||+
T Consensus       122 ~~iiH~~l~~~nill~~~~--~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~k-sDVysfG~~l~ei  198 (259)
T PF07714_consen  122 NNIIHGNLSPSNILLDSNG--QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKK-SDVYSFGMLLYEI  198 (259)
T ss_dssp             TTEEEST-SGGGEEEETTT--EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHH-HHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccc
Confidence            4799999999999999777  799999999876522211   122346678999999987777544 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |+.||......    .....+... ...+....++..+.++|.+||..+|.+|||+.++++
T Consensus       199 ~~~~~~p~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  199 LTLGKFPFSDYDNE----EIIEKLKQG-QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HTTSSGTTTTSCHH----HHHHHHHTT-EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             cccccccccccccc----ccccccccc-ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            99 78998765332    222333222 223333458999999999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=1.5e-23  Score=181.30  Aligned_cols=138  Identities=30%  Similarity=0.447  Sum_probs=111.3

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccC-----CccCCCcccHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSR-----KEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~-----~~~~~~~~DiwslG~il~   75 (225)
                      .+||||||-.|||++.++  .|||+|||++...... ....+.+|||+|||||++..     ..|+.. +|+||||++..
T Consensus       143 kviHRDikG~NiLLT~e~--~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R-~D~WsLGITaI  219 (953)
T KOG0587|consen  143 KVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYR-SDLWSLGITAI  219 (953)
T ss_pred             ceeeecccCceEEEeccC--cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccc-cchhhccceee
Confidence            589999999999999887  6999999998765544 33456689999999999853     335444 89999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      ||.-|.+|+.+..+...+..   ....+.+.+..+.+++.++.+||..||.+|-.+||+..++++|||+.
T Consensus       220 EladG~PPl~DmHPmraLF~---IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  220 EMAEGAPPLCDMHPMRALFL---IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             hhcCCCCCccCcchhhhhcc---CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence            99999999988766443332   22233334444557889999999999999999999999999999997

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.89  E-value=6.1e-23  Score=162.02  Aligned_cols=130  Identities=22%  Similarity=0.305  Sum_probs=94.4

Q ss_pred             CceEecCCCCCcEEEcCCCCC-----CEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC--ccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAP-----RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK--EYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~-----~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~--~~~~~~~DiwslG~i   73 (225)
                      .||+||||||+|||++..+..     .+||+|||++.....   .....++..|+|||.+.+.  .++ .++|+||||++
T Consensus       120 ~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~-~~~Di~slG~~  195 (259)
T cd05037         120 KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLT-IAADKWSFGTT  195 (259)
T ss_pred             CCeecccCccceEEEecCccccCCceeEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcc-hhhHHHHHHHH
Confidence            489999999999999765422     599999999875433   2234567789999998766  444 44999999999


Q ss_pred             HHHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           74 LYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        74 l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +|+|++ |..||...... .......    .....+.  .....+.+++.+||..+|.+|||+.++++.
T Consensus       196 ~~~l~~~~~~p~~~~~~~-~~~~~~~----~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  257 (259)
T cd05037         196 LLEICSNGEEPLSTLSSS-EKERFYQ----DQHRLPM--PDCAELANLINQCWTYDPTKRPSFRAILRD  257 (259)
T ss_pred             HHHHHhCCCCCcccCCch-hHHHHHh----cCCCCCC--CCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            999998 57788665422 1111111    1111121  124789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.5e-23  Score=186.76  Aligned_cols=132  Identities=26%  Similarity=0.413  Sum_probs=103.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC---CcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~---~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +++|||||..+|||++...  .|||+|||+|+.........   ...-...|||||.+....++++ +|||||||++||+
T Consensus       821 ~~fvHRDLAaRNCLL~~~r--~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtsk-SDvWsFGVllWEi  897 (1025)
T KOG1095|consen  821 KHFVHRDLAARNCLLDERR--VVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSK-SDVWSFGVLLWEI  897 (1025)
T ss_pred             CCCcCcchhhhheeecccC--cEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccc-cchhhhHHHHHHH
Confidence            5789999999999998775  79999999998322211111   1123467999999998888877 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||.+....+.+..    .+... +++.+..++..+.++|..||+.+|++||++..|++
T Consensus       898 fslG~~PY~~~~n~~v~~~----~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  898 FSLGATPYPSRSNFEVLLD----VLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HhCCCCCCCCcchHHHHHH----HHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            98 8899988666443322    22222 55555679999999999999999999999999887

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=6.5e-23  Score=163.80  Aligned_cols=131  Identities=23%  Similarity=0.348  Sum_probs=94.6

Q ss_pred             CceEecCCCCCcEEEcCCC-----CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-----APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-----~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +||+||||||+|||++..+     ...+|++|||++......   ....++..|+|||.+.+....+.++|+|||||++|
T Consensus       136 ~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~  212 (274)
T cd05076         136 KNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLL  212 (274)
T ss_pred             CCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHH
Confidence            4899999999999997532     224899999987643221   23357788999999876443345599999999999


Q ss_pred             HHH-hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           76 VML-VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        76 ~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +|+ +|..||........ ....    ......+.  ..+..+.++|.+||..+|.+|||+.+++++
T Consensus       213 el~~~g~~p~~~~~~~~~-~~~~----~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         213 EICFDGEVPLKERTPSEK-ERFY----EKKHRLPE--PSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHhCCCCCccccChHHH-HHHH----HhccCCCC--CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            985 68999976543221 1111    11122222  356789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.4e-22  Score=166.97  Aligned_cols=137  Identities=28%  Similarity=0.401  Sum_probs=96.3

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCc-ccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKST-VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~-~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||||||||+|||++.+.  ..||+|||+|+.... .....+. .||.+|+|||.+..+..+.+ +||||||+++.|+++
T Consensus       197 ~iiHrDiKssNILLD~~~--~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~K-sDVySFGVvllElit  273 (361)
T KOG1187|consen  197 PIIHRDIKSSNILLDEDF--NAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEK-SDVYSFGVVLLELIT  273 (361)
T ss_pred             CEecCCCCHHHeeECCCC--CEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcc-cccccchHHHHHHHh
Confidence            499999999999999887  799999999976554 3333333 79999999999987666655 999999999999999


Q ss_pred             CCCCCCCCC--ChhHHHHHHHHHhcc----cccCCCC--CCCC--H---HHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPE--DPRNFKTTIQRILSV----HYSIPGY--VRVS--L---ECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~--~~~~~~~~~~~~~~~----~~~~~~~--~~~~--~---~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |+.+.....  ....+..........    ....|..  ...+  .   .+..+..+|++.+|..||++.++++.
T Consensus       274 gr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~  348 (361)
T KOG1187|consen  274 GRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKE  348 (361)
T ss_pred             CCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence            998886432  112222221111111    1111111  1223  2   25577889999999999999997543

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.87  E-value=8.3e-23  Score=171.52  Aligned_cols=131  Identities=24%  Similarity=0.435  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCccc--CCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVG--TPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g--~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +++|||||-..|||+.+..  .|||+|||+++........+...|  ..-|||||.+....+++. +|||-||+.+||++
T Consensus       510 krfVHRDIAaRNiLVsSp~--CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtA-SDVWMFgVCmWEIl  586 (974)
T KOG4257|consen  510 KRFVHRDIAARNILVSSPQ--CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTA-SDVWMFGVCMWEIL  586 (974)
T ss_pred             hchhhhhhhhhheeecCcc--eeeecccchhhhccccchhhccccccceeecCccccchhcccch-hhHHHHHHHHHHHH
Confidence            4789999999999998766  799999999997766555444333  456999999988888766 99999999999988


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      . |..||.+-.+.+.+..+     ...-+.|.++++++.+..|+.+||.++|.+||++.++.
T Consensus       587 ~lGvkPfqgvkNsDVI~~i-----EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  587 SLGVKPFQGVKNSDVIGHI-----ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HhcCCccccccccceEEEe-----cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence            5 99999987665433222     23346677778999999999999999999999988764

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=5.9e-23  Score=171.47  Aligned_cols=133  Identities=29%  Similarity=0.436  Sum_probs=106.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC-CcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~-~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +++|||||-.+|||+..++  .+||+|||+++......... ..--...|+|||.+....|+.+ +|||||||++||+++
T Consensus       281 k~~IHRDIAARNcL~~~~~--~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~k-TDV~sfGV~~~Eif~  357 (474)
T KOG0194|consen  281 KNCIHRDIAARNCLYSKKG--VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFK-TDVWSFGVLLWEIFE  357 (474)
T ss_pred             CCCcchhHhHHHheecCCC--eEEeCccccccCCcceeeccccccCcceecChhhhccCccccc-cchhheeeeEEeeec
Confidence            5899999999999998766  58999999987654222222 2234578999999998888766 999999999999998


Q ss_pred             -CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 -GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                       |..||.+....    ....++....++.+.+...+..+..++.+||..+|++||++.++.+
T Consensus       358 ~g~~Py~g~~~~----~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  358 NGAEPYPGMKNY----EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             cCCCCCCCCCHH----HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence             88899886653    4445555556666666678889999999999999999999998765

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.87  E-value=1.6e-22  Score=162.54  Aligned_cols=145  Identities=30%  Similarity=0.473  Sum_probs=100.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccC-----------------CCC-C----------------C--------
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS-----------------SVL-H----------------S--------   38 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~-----------------~~~-~----------------~--------   38 (225)
                      .|||||||||.|+|.+.... .-.|.|||+|..                 ... .                .        
T Consensus       151 ~GIvHRDiKpsNFL~n~~t~-rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~  229 (418)
T KOG1167|consen  151 NGIVHRDIKPSNFLYNRRTQ-RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDG  229 (418)
T ss_pred             cCccccCCCccccccccccC-CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCC
Confidence            59999999999999976443 578999999861                 000 0                0        


Q ss_pred             ---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHH--------HHH------
Q 027327           39 ---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDP-RNFKTTI--------QRI------  100 (225)
Q Consensus        39 ---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~--------~~~------  100 (225)
                         ......||++|+|||++...+-.+.++||||.|+|+..+++++.||....+. ..+.++.        ++.      
T Consensus       230 r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~  309 (418)
T KOG1167|consen  230 RPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGR  309 (418)
T ss_pred             ccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCc
Confidence               0012369999999999987776666799999999999999999998543321 1111110        000      


Q ss_pred             ---hc----------------c----ccc--------CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327          101 ---LS----------------V----HYS--------IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       101 ---~~----------------~----~~~--------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                         ..                .    -..        .....-++..+.+|+.+||..||.+|+||+++|+||||..
T Consensus       310 ~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  310 ILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             eeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence               00                0    000        0001124457889999999999999999999999999973

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.86  E-value=1.2e-21  Score=171.76  Aligned_cols=133  Identities=29%  Similarity=0.481  Sum_probs=102.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC--Cccc--CCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK--STVG--TPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~g--~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +++|||||-.+|||+..+.  .+||+|||+|+.........  ...+  ...|||||.+....|+.+ +||||+|+++||
T Consensus       437 ~~~vHRDLAaRNVLi~~~~--~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~k-SDVWSfGI~L~E  513 (609)
T KOG0200|consen  437 VPCVHRDLAARNVLITKNK--VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSK-SDVWSFGILLWE  513 (609)
T ss_pred             CCccchhhhhhhEEecCCC--EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccccc-chhhHHHHHHHH
Confidence            4689999999999998776  79999999998543322221  1222  345999999998888766 899999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      +++ |..||.+......+   .+ ......+...+..++.++.++++.||+.+|++||++.++.+
T Consensus       514 ifsLG~~PYp~~~~~~~l---~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  514 IFTLGGTPYPGIPPTEEL---LE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HhhCCCCCCCCCCcHHHH---HH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            997 88999874433322   22 23334454555568999999999999999999999999865

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.86  E-value=4.2e-22  Score=169.20  Aligned_cols=131  Identities=34%  Similarity=0.490  Sum_probs=97.6

Q ss_pred             ceEecCCCCCcEEEcCC--CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC-CccCCCcccHHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGS--KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR-KEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~--~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~~~~~~DiwslG~il~~ll   78 (225)
                      |||||||||.||++-..  +....||+|||.|+.........+.+||+.|.+||+... +.|+.. +|.|||||++|+++
T Consensus       140 ~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~t-VDLWS~GvtlY~ca  218 (732)
T KOG4250|consen  140 GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTAT-VDLWSFGVTLYECA  218 (732)
T ss_pred             CceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCce-eehhhhhhHHHHHh
Confidence            89999999999998432  333579999999999888888888999999999999984 556555 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhccc-------------------ccCCCCCCCCH----HHHHHHHhhcccCCCCCC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVH-------------------YSIPGYVRVSL----ECRHLLSRIFVADPEKRI  133 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~----~~~~li~~~l~~dP~~R~  133 (225)
                      ||..||.....+.+...++..+....                   ..+|.+.+.+.    .+..++..+|..+|++|.
T Consensus       219 TG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  219 TGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             ccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence            99999977655543333332222111                   11222223333    345778889999999999

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.86  E-value=7.4e-23  Score=175.25  Aligned_cols=133  Identities=24%  Similarity=0.434  Sum_probs=108.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCc-cc--CCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKST-VG--TPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~-~g--~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|.|||||-..|||++.+-  ..|++|||+++...... ...+. .|  ...|.|||.+...++++. +|+||+||+|||
T Consensus       750 m~YVHRDLAARNILVNsnL--vCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsA-SDVWSyGIVmWE  826 (996)
T KOG0196|consen  750 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWE  826 (996)
T ss_pred             cCchhhhhhhhheeeccce--EEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCch-hhccccceEEEE
Confidence            6899999999999998877  79999999998654433 22222 22  457999999998898766 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      .++ |..||.+.++.+.+..+     ...+++|++..++..+..|+..||++|-..||.+.+|+.+
T Consensus       827 VmSyGERPYWdmSNQdVIkaI-----e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  827 VMSYGERPYWDMSNQDVIKAI-----EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             ecccCCCcccccchHHHHHHH-----HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence            775 99999887775544433     3457788888899999999999999999999999998764

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1.3e-21  Score=164.51  Aligned_cols=131  Identities=24%  Similarity=0.407  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcc---cCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~---g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +++|||||-..|||+..+.  .||++|||+++.+...... ...   -.+-|.|||-+....++.+ +|||+||+++||+
T Consensus       384 knFIHRDLAARNCLVgEnh--iVKvADFGLsRlMtgDTYT-AHAGAKFPIKWTAPEsLAyNtFSiK-SDVWAFGVLLWEI  459 (1157)
T KOG4278|consen  384 KNFIHRDLAARNCLVGENH--IVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNTFSIK-SDVWAFGVLLWEI  459 (1157)
T ss_pred             hhhhhhhhhhhhccccccc--eEEeeccchhhhhcCCcee-cccCccCcccccCcccccccccccc-hhhHHHHHHHHHH
Confidence            5789999999999998776  7999999999977554332 222   2457999999998888877 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      .+ |-.||.+.....     +..++...+++..+..+++.+.+|++.||++.|..||++.++-+
T Consensus       460 ATYGMsPYPGidlSq-----VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  460 ATYGMSPYPGIDLSQ-----VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             HhcCCCCCCCccHHH-----HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence            87 888998765422     23344556666666779999999999999999999999988754

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=9.9e-22  Score=166.86  Aligned_cols=136  Identities=25%  Similarity=0.426  Sum_probs=109.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcc----cCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV----GTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~----g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +++|||||-..|+|+-...  .|||+|||+.+-+......+...    ....|+|||.+....++.+ +|+|++||++||
T Consensus       231 krlvHRDLAARNlllaspr--tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFSha-SDvWmyGVTiWE  307 (1039)
T KOG0199|consen  231 KRLVHRDLAARNLLLASPR--TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHA-SDVWMYGVTIWE  307 (1039)
T ss_pred             hhhhhhhhhhhhheecccc--eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcccccccc-chhhhhhhhHHh
Confidence            5789999999999997654  79999999998777666555332    3456999999999999766 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      |++ |..||.+.....    +++++- ....++....++..+.++++.||..+|..|||+..|.+.-+.
T Consensus       308 MFtyGEePW~G~~g~q----IL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  308 MFTYGEEPWVGCRGIQ----ILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             hhccCCCCCCCCCHHH----HHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence            997 789999876543    333333 444566666789999999999999999999999998755433

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=8e-22  Score=171.48  Aligned_cols=145  Identities=35%  Similarity=0.543  Sum_probs=110.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +||.||||||+|+++..++  .+||+|||.+........     ....+|+..|+|||++.+..|.....||||.|++++
T Consensus       439 ~GiahrdlK~enll~~~~g--~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~  516 (601)
T KOG0590|consen  439 MGLAHRDLKLENLLVTENG--ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYI  516 (601)
T ss_pred             cCceeccCccccEEEecCC--ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEE
Confidence            5899999999999998777  799999999875443322     234579999999999999999999899999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhccc---ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVH---YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      .|.+|+.||......++............   ........++...+.+|.+||+++|.+|.|+++|++.+||+..
T Consensus       517 ~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  517 CMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             EEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            99999999976554432211110000000   0001112367788999999999999999999999999999864

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.83  E-value=7.7e-21  Score=158.64  Aligned_cols=137  Identities=22%  Similarity=0.350  Sum_probs=103.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC---CcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~---~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +++|||||.+.|||++.+.  ++||+|||+++........+   ..+-...|||+|.+..++++++ +|+|+||+++||+
T Consensus       656 ~nfVHrd~a~rNcLv~~e~--~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFtta-SDvWafgvTlwE~  732 (807)
T KOG1094|consen  656 LNFVHRDLATRNCLVDGEF--TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTA-SDVWAFGVTLWEV  732 (807)
T ss_pred             hchhhccccccceeecCcc--cEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccch-hhhhhhHHHHHHH
Confidence            4799999999999998777  89999999998654433322   2345679999999998999877 9999999999998


Q ss_pred             H--hCCCCCCCCCChhHHHHHHHHHhccc---ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 L--VGAYPFEDPEDPRNFKTTIQRILSVH---YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l--~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +  +...||....+........ ......   .-++.+.-++..+.+++.+||.++..+||+++++..|
T Consensus       733 ~~~C~e~Py~~lt~e~vven~~-~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~  800 (807)
T KOG1094|consen  733 FMLCREQPYSQLTDEQVVENAG-EFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF  800 (807)
T ss_pred             HHHHhhCchhhhhHHHHHHhhh-hhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence            6  4788998766543332222 121111   1123334578899999999999999999999998654

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.80  E-value=1.1e-19  Score=167.93  Aligned_cols=134  Identities=21%  Similarity=0.258  Sum_probs=89.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .+|+||||||+||+++.+.  ..++. ||.+.....   .....+++.|+|||++.+..++.+ +|||||||++|||++|
T Consensus       802 ~~iiH~dlkp~Nil~~~~~--~~~~~-~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~-sDv~S~Gvvl~el~tg  874 (968)
T PLN00113        802 PAVVVGNLSPEKIIIDGKD--EPHLR-LSLPGLLCT---DTKCFISSAYVAPETRETKDITEK-SDIYGFGLILIELLTG  874 (968)
T ss_pred             CCeecCCCCHHhEEECCCC--ceEEE-ecccccccc---CCCccccccccCcccccCCCCCcc-cchhhHHHHHHHHHhC
Confidence            3799999999999998766  34544 555432211   123368899999999988887665 9999999999999999


Q ss_pred             CCCCCCCCCh-hHHHHHHHHHhcc-------cccCCCCC----CCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           81 AYPFEDPEDP-RNFKTTIQRILSV-------HYSIPGYV----RVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        81 ~~pf~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +.||...... .......+.....       ........    ....++.+++.+||+.+|.+|||+.++++.
T Consensus       875 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        875 KSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            9998542211 1111111111000       00000000    112356789999999999999999999875

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.80  E-value=2.2e-19  Score=159.54  Aligned_cols=135  Identities=27%  Similarity=0.429  Sum_probs=98.0

Q ss_pred             ecCCCCC-cEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            5 HRDLKLE-NTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         5 Hrdlkp~-Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      |+..+|. |+++....  .+++.+||.++.......   ....+||+.|+|||++.+..+..+ +|||||||++|+|++|
T Consensus       500 ~~~~~p~~~~~~~p~~--~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~-~DiwSlG~il~ElltG  576 (669)
T cd05610         500 TQKPRPHGNLYQTPKQ--VKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPA-VDWWALGVCLFEFLTG  576 (669)
T ss_pred             CCCCCCCCceeECCcc--ccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcH-HHHHHHHHHHHHHHHC
Confidence            3455555 45554433  468899998875433222   234579999999999988887655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCC-CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPG-YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +.||.+......+    ..+.......+. ...++..+.+++.+||..+|.+||++.++++||||..
T Consensus       577 ~~pf~~~~~~~~~----~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~  639 (669)
T cd05610         577 IPPFNDETPQQVF----QNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHG  639 (669)
T ss_pred             CCCCCCCCHHHHH----HHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcC
Confidence            9999765443322    333332222222 1256788999999999999999999999999999964

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.80  E-value=2.1e-19  Score=144.03  Aligned_cols=131  Identities=19%  Similarity=0.361  Sum_probs=104.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      ||||.||-.+|++|++.-  +|||+|=.+++-.-....   ....-....||+||.+....|++. +|+||||+++|||+
T Consensus       416 ~ViHkDiAaRNCvIdd~L--qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssa-sDvWsfGVllWELm  492 (563)
T KOG1024|consen  416 GVIHKDIAARNCVIDDQL--QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSA-SDVWSFGVLLWELM  492 (563)
T ss_pred             Ccccchhhhhcceehhhe--eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcch-hhhHHHHHHHHHHH
Confidence            799999999999998776  799999988874322111   111223557999999999999766 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||....+.+     +.......+++..+.++++++..++.-||...|++||+++|+..
T Consensus       493 tlg~~PyaeIDPfE-----m~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  493 TLGKLPYAEIDPFE-----MEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             hcCCCCccccCHHH-----HHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            7 889997655432     22334556677777789999999999999999999999999864

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=2.6e-19  Score=146.73  Aligned_cols=124  Identities=28%  Similarity=0.434  Sum_probs=89.7

Q ss_pred             CEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCC------ChhHHHH
Q 027327           22 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPE------DPRNFKT   95 (225)
Q Consensus        22 ~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~   95 (225)
                      .|||+|||-|.....  .....+.|..|+|||++.+..|... +||||++|+++||+||-..|...+      +.+.+..
T Consensus       392 ~vKIaDlGNACW~~k--hFT~DIQTRQYRapEVllGsgY~~~-ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~  468 (590)
T KOG1290|consen  392 RVKIADLGNACWVHK--HFTEDIQTRQYRAPEVLLGSGYSTS-ADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL  468 (590)
T ss_pred             eEEEeeccchhhhhh--hhchhhhhhhccCcceeecCCCCCc-hhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence            699999999986432  2344578999999999999999888 899999999999999999996543      2223333


Q ss_pred             HHHHHhccccc-----------------------CCCC---------CCCC----HHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           96 TIQRILSVHYS-----------------------IPGY---------VRVS----LECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        96 ~~~~~~~~~~~-----------------------~~~~---------~~~~----~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      +++-+......                       +..+         ..++    .++.+||.-||+.+|++||||.++|
T Consensus       469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl  548 (590)
T KOG1290|consen  469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL  548 (590)
T ss_pred             HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence            33222111000                       0000         0122    2567999999999999999999999


Q ss_pred             cCcccCcCC
Q 027327          140 KHPWFLKNL  148 (225)
Q Consensus       140 ~hp~~~~~~  148 (225)
                      +|||+....
T Consensus       549 ~hPwLn~~~  557 (590)
T KOG1290|consen  549 KHPWLNPVA  557 (590)
T ss_pred             cCccccCCC
Confidence            999998643

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.78  E-value=2.5e-19  Score=158.25  Aligned_cols=139  Identities=35%  Similarity=0.579  Sum_probs=109.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----------------CCCCcccCCCCCccccccCCccCCCc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----------------QPKSTVGTPAYIAPEVLSRKEYDGKI   64 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----------------~~~~~~g~~~y~aPE~l~~~~~~~~~   64 (225)
                      .||+|||+||+|.+|..-+  ++|++|||+.+......                ..+..+||+.|+|||++..+.|. +.
T Consensus       162 ygivhrdlkpdnllIT~mG--hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgyg-kp  238 (1205)
T KOG0606|consen  162 YGIVHRDLKPDNLLITSMG--HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYG-KP  238 (1205)
T ss_pred             CCeecCCCCCCcceeeecc--cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccC-CC
Confidence            4899999999999998766  89999999986321111                11345799999999999988885 55


Q ss_pred             ccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCC-CCCCCHHHHHHHHhhcccCCCCCC---CHHHHhc
Q 027327           65 ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG-YVRVSLECRHLLSRIFVADPEKRI---TIPEIQK  140 (225)
Q Consensus        65 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~---s~~eil~  140 (225)
                      +|+|++|+|+|+.+.|..||.+....+.+...+...    ..++. ...+++++++++.++|+.+|..|.   .+-++.+
T Consensus       239 vdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~----i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~  314 (1205)
T KOG0606|consen  239 VDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD----IEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQ  314 (1205)
T ss_pred             ccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh----ccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhh
Confidence            999999999999999999999877655555444332    22221 234788999999999999999998   4677899


Q ss_pred             CcccCc
Q 027327          141 HPWFLK  146 (225)
Q Consensus       141 hp~~~~  146 (225)
                      |+||+.
T Consensus       315 h~ff~~  320 (1205)
T KOG0606|consen  315 HGFFQL  320 (1205)
T ss_pred             ccceee
Confidence            999964

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.78  E-value=4.6e-19  Score=144.74  Aligned_cols=135  Identities=23%  Similarity=0.230  Sum_probs=89.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccC-----CCcccHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYD-----GKIADVWSCGVT   73 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~-----~~~~DiwslG~i   73 (225)
                      .|+|||||+.|||+.++.  +..|+|||+|..+.....   ....+||.+|||||++.+...-     .+..||||+|.+
T Consensus       336 ~IaHRDlkSkNVLvK~Dl--TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLV  413 (534)
T KOG3653|consen  336 PIAHRDLKSKNVLVKNDL--TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLV  413 (534)
T ss_pred             ccccccccccceEEccCC--cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHH
Confidence            699999999999998887  799999999987654332   2235899999999999754322     245899999999


Q ss_pred             HHHHHhCCCCCC-CC----------------CChhHHHHHHHHHhcccccCCCCC-CCCHHHHHHHHhhcccCCCCCCCH
Q 027327           74 LYVMLVGAYPFE-DP----------------EDPRNFKTTIQRILSVHYSIPGYV-RVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        74 l~~ll~g~~pf~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +|||++...-+. +.                ...+.....+++..++.++..... ....-+++.+..||..||+-|.|+
T Consensus       414 LWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA  493 (534)
T KOG3653|consen  414 LWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTA  493 (534)
T ss_pred             HHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhh
Confidence            999997544332 11                111111112222222211111000 123457899999999999999998


Q ss_pred             HHH
Q 027327          136 PEI  138 (225)
Q Consensus       136 ~ei  138 (225)
                      .=+
T Consensus       494 ~Cv  496 (534)
T KOG3653|consen  494 GCV  496 (534)
T ss_pred             HHH
Confidence            543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.77  E-value=3.5e-19  Score=150.66  Aligned_cols=144  Identities=26%  Similarity=0.367  Sum_probs=108.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC-CCCCCCCcccCCCCCccccc---cCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-LHSQPKSTVGTPAYIAPEVL---SRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~l---~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|=+|||||-.|||++..+  .||++|||.+.... .-...+.++||++|||||+-   +...|... +|||++|++..+
T Consensus       131 ~gk~hRdiKGanilltd~g--DvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynql-cdiwa~gitAie  207 (829)
T KOG0576|consen  131 QGKIHRDIKGANILLTDEG--DVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQL-CDIWALGITAIE  207 (829)
T ss_pred             CCcccccccccceeecccC--ceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhccccccc-ccccccccchhh
Confidence            3568999999999998877  69999999976433 23445678999999999986   34556544 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      +.--++|.......+.+.- +.+-...........++++.+.+|++.+|.++|++||+++-+|.|||..+..
T Consensus       208 l~eLqpplfdlhpmr~l~L-mTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l  278 (829)
T KOG0576|consen  208 LGELQPPLFDLHPMRALFL-MTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTL  278 (829)
T ss_pred             hhhcCCcccccchHHHHHH-hhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccch
Confidence            9888888665444333221 1111122222333456889999999999999999999999999999997653

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.5e-18  Score=140.83  Aligned_cols=137  Identities=27%  Similarity=0.421  Sum_probs=94.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-----CCCCCcccCCCCCccccccCCc----c-CCCcccHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-----SQPKSTVGTPAYIAPEVLSRKE----Y-DGKIADVWSCG   71 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-----~~~~~~~g~~~y~aPE~l~~~~----~-~~~~~DiwslG   71 (225)
                      .|.|||||+.|||+..++  ...|+|+|+|......     ...+..+||.+|||||++...-    + +.+.+||||||
T Consensus       336 aIAHRDlKSKNILVKkn~--~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafg  413 (513)
T KOG2052|consen  336 AIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFG  413 (513)
T ss_pred             hhhccccccccEEEccCC--cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHH
Confidence            478999999999998888  7999999999643332     2234568999999999985322    1 23458999999


Q ss_pred             HHHHHHHh----------CCCCCCCCCChhHHHHHHHHHhc---ccccCCCCCCCCH---HHHHHHHhhcccCCCCCCCH
Q 027327           72 VTLYVMLV----------GAYPFEDPEDPRNFKTTIQRILS---VHYSIPGYVRVSL---ECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        72 ~il~~ll~----------g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~li~~~l~~dP~~R~s~  135 (225)
                      .++||++.          -+.||.+..+.+.-..-++++.-   ..+.+|..-.-.+   .+..+++.||..+|.-|.||
T Consensus       414 LVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA  493 (513)
T KOG2052|consen  414 LVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA  493 (513)
T ss_pred             HHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence            99999984          25788765554443444444321   1222222111122   34578999999999999998


Q ss_pred             HHHhc
Q 027327          136 PEIQK  140 (225)
Q Consensus       136 ~eil~  140 (225)
                      =.+.+
T Consensus       494 LriKK  498 (513)
T KOG2052|consen  494 LRIKK  498 (513)
T ss_pred             HHHHH
Confidence            76654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.75  E-value=6.6e-19  Score=135.17  Aligned_cols=143  Identities=23%  Similarity=0.394  Sum_probs=96.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---Ccc-CCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEY-DGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~-~~~~~DiwslG~il~~   76 (225)
                      +++||||||.+||||-.....+|||||||+.+....  .....-.+..|.+||++..   ..+ ..+.+|+|.||+++|.
T Consensus       140 knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~--tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~  217 (378)
T KOG1345|consen  140 KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT--TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFY  217 (378)
T ss_pred             cchhhcccccceEEEecCCccEEEeeecccccccCc--eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeee
Confidence            589999999999999544434899999999764322  2222224557889987632   222 1234899999999999


Q ss_pred             HHhCCCCCCCCCCh-hHHHHHHHHHhcccccCC-CCCCCCHHHHHHHHhhcccCCCCC---CCHHHHhcCcccC
Q 027327           77 MLVGAYPFEDPEDP-RNFKTTIQRILSVHYSIP-GYVRVSLECRHLLSRIFVADPEKR---ITIPEIQKHPWFL  145 (225)
Q Consensus        77 ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~R---~s~~eil~hp~~~  145 (225)
                      +++|.+||+..... ..+....+.........| .+..+++.+..+.++-|..+|+.|   .++....+..|..
T Consensus       218 cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  218 CLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             eecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            99999999853322 122232222222222222 344689999999999999999999   5666666666764

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.73  E-value=8e-19  Score=147.94  Aligned_cols=128  Identities=38%  Similarity=0.645  Sum_probs=105.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+|||+|++||+++.+|  ++|+.|||+++........   +||..|||||++.  ... .++|+||+|+++++|++|
T Consensus       116 l~iiyrd~k~enilld~~G--hi~~tdfglske~v~~~~~---cgt~eymApEI~~--gh~-~a~D~ws~gvl~felltg  187 (612)
T KOG0603|consen  116 LGIAYRDYKLENVLLLLEG--HIKLTDFGLSKEAVKEKIA---CGTYEYRAPEIIN--GHL-SAADWWSFGVLAFELLTG  187 (612)
T ss_pred             hHHHHhcccccceeecccC--ccccCCchhhhHhHhhhhc---ccchhhhhhHhhh--ccC-CcccchhhhhhHHHHhhC
Confidence            4789999999999998887  8999999998865443332   8999999999997  333 338999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      ..||..        .+...+.......|.  .++..+++++..++..+|.+|..     +.++++|+||..
T Consensus       188 ~~pf~~--------~~~~~Il~~~~~~p~--~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~  248 (612)
T KOG0603|consen  188 TLPFGG--------DTMKRILKAELEMPR--ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQS  248 (612)
T ss_pred             CCCCch--------HHHHHHhhhccCCch--hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchhee
Confidence            999976        445555555555554  48899999999999999999995     478999999964

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.73  E-value=7e-18  Score=145.85  Aligned_cols=132  Identities=24%  Similarity=0.440  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcc---cCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~---g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .++|||||-.+|+|+..-.  +||+.|||+++............   -.+.|||-|.+....|+.. +||||+||++||+
T Consensus       817 qrlVHrdLaaRNVLVksP~--hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thq-SDVWsfGVtiWEl  893 (1177)
T KOG1025|consen  817 QRLVHRDLAARNVLVKSPN--HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQ-SDVWSFGVTIWEL  893 (1177)
T ss_pred             cchhhhhhhhhheeecCCC--eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCch-hhhhhhhhhHHHH
Confidence            3689999999999997655  79999999999766554443332   3457999999998888766 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      +| |..||.+....+     +..++....+++.++..+-++.-++.+||..|+..||+++++-.
T Consensus       894 mTFGa~Py~gi~~~e-----I~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  894 MTFGAKPYDGIPAEE-----IPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HhcCCCccCCCCHHH-----hhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence            97 999998865432     22233334446666678999999999999999999999988644

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.72  E-value=2.6e-17  Score=124.86  Aligned_cols=102  Identities=47%  Similarity=0.720  Sum_probs=84.2

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCC-ccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRK-EYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~-~~~~~~~DiwslG~il~~l   77 (225)
                      .|++|+||+|.||+++. .+  .++|+|||.+....... ......+...|++||.+... .+. .+.|+|++|++++++
T Consensus       111 ~~~~H~dl~~~ni~~~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~-~~~D~~~lg~~~~~l  187 (215)
T cd00180         111 NGIIHRDLKPENILLDSDNG--KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYS-EKSDIWSLGVILYEL  187 (215)
T ss_pred             CCeeccCCCHhhEEEeCCCC--cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCC-chhhhHHHHHHHHHH
Confidence            48999999999999987 44  79999999987543332 12334578889999998765 443 448999999999998


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                                                           ..+.+++.+|+..+|.+||++.++++|+
T Consensus       188 -------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                                 5789999999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.70  E-value=4.9e-18  Score=140.70  Aligned_cols=133  Identities=29%  Similarity=0.457  Sum_probs=95.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-------CCCCcccCCCCCccccccCCccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~i   73 (225)
                      +|.+|||+||.||++..+.  .+||.|||+........       .....+||.+||+||.+.+..|..+ +||||||++
T Consensus       375 k~~ihrdlkp~nif~~~d~--q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k-vdIyaLGli  451 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDD--QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEK-VDIYALGLI  451 (516)
T ss_pred             ccchhhhccccccccccch--hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhh-cchhhHHHH
Confidence            5789999999999997666  69999999986544433       2344579999999999999999766 999999999


Q ss_pred             HHHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           74 LYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        74 l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      ++|++. -..+|..       ...+..+....++ |.+..-.++-..|+..||.+.|.+||++.+.--|.|.
T Consensus       452 l~EL~~~f~T~~er-------~~t~~d~r~g~ip-~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  452 LAELLIQFSTQFER-------IATLTDIRDGIIP-PEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             HHHHHHHhccHHHH-------HHhhhhhhcCCCC-hHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            999986 3333321       1222222222221 1111123455799999999999999987777666654

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.68  E-value=1.2e-17  Score=139.54  Aligned_cols=83  Identities=36%  Similarity=0.617  Sum_probs=74.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||||||||-+|+++++++  .+||+|||.|... .......++||..|.|||++.+.+|-++..|||+||+++|.++..
T Consensus       689 ~~ivhrdikdenvivd~~g--~~klidfgsaa~~-ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyk  765 (772)
T KOG1152|consen  689 QGIVHRDIKDENVIVDSNG--FVKLIDFGSAAYT-KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYK  765 (772)
T ss_pred             cCceecccccccEEEecCC--eEEEeeccchhhh-cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEec
Confidence            3899999999999999887  7999999998744 344556789999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q 027327           81 AYPFED   86 (225)
Q Consensus        81 ~~pf~~   86 (225)
                      ..||.+
T Consensus       766 enpyyn  771 (772)
T KOG1152|consen  766 ENPYYN  771 (772)
T ss_pred             cCCCcC
Confidence            999864

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.65  E-value=3.3e-17  Score=129.70  Aligned_cols=117  Identities=24%  Similarity=0.367  Sum_probs=75.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC--------ccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK--------EYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~--------~~~~~~~DiwslG~   72 (225)
                      .||||+||+|+|++++.++  .++|+||+...........  ...+..|.|||.....        .++ .+.|.|+||+
T Consensus       164 ~GlVHgdi~~~nfll~~~G--~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t-~~~DaW~LG~  238 (288)
T PF14531_consen  164 YGLVHGDIKPENFLLDQDG--GVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYT-FATDAWQLGI  238 (288)
T ss_dssp             TTEEEST-SGGGEEE-TTS---EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE--HHHHHHHHHH
T ss_pred             cceEecccceeeEEEcCCC--CEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceee-eccCHHHHHH
Confidence            5899999999999999887  7999999876543332221  3345779999987432        233 3489999999


Q ss_pred             HHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCC
Q 027327           73 TLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        73 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      ++|.|++++.||.........          ...+....+++..++.||.++|+.+|.+|
T Consensus       239 ~ly~lWC~~lPf~~~~~~~~~----------~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  239 TLYSLWCGRLPFGLSSPEADP----------EWDFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHHSS-STCCCGGGSTS----------GGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHHccCCCCCCCccccc----------cccchhcCCcCHHHHHHHHHHccCCcccC
Confidence            999999999999754332110          00222233689999999999999999988

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.62  E-value=4.6e-15  Score=119.48  Aligned_cols=145  Identities=34%  Similarity=0.553  Sum_probs=101.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-------CCCCcccCCCCCccccccCC--ccCCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-------QPKSTVGTPAYIAPEVLSRK--EYDGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-------~~~~~~g~~~y~aPE~l~~~--~~~~~~~DiwslG   71 (225)
                      .|++|||+||+||+++.... .++++|||+++......       ......++..|+|||.+.+.  .+.....|+||+|
T Consensus       120 ~~~~hrd~kp~nil~~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g  198 (384)
T COG0515         120 KGIIHRDIKPENILLDRDGR-VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLG  198 (384)
T ss_pred             CCeeccCCCHHHeeecCCCC-eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHH
Confidence            36899999999999986552 48999999987544332       23556799999999999873  3444458999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHHHhccccc-C--CCCCCC----CHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           72 VTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-I--PGYVRV----SLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        72 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~----~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +++++++.|..||...............+...... .  +.....    ...+.+++.+++..+|..|.+......+++.
T Consensus       199 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~  278 (384)
T COG0515         199 ITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL  278 (384)
T ss_pred             HHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHh
Confidence            99999999999987655310111222222222211 1  111111    2578999999999999999999998888665


Q ss_pred             Cc
Q 027327          145 LK  146 (225)
Q Consensus       145 ~~  146 (225)
                      ..
T Consensus       279 ~~  280 (384)
T COG0515         279 AH  280 (384)
T ss_pred             hC
Confidence            43

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=5e-15  Score=119.57  Aligned_cols=131  Identities=27%  Similarity=0.392  Sum_probs=89.5

Q ss_pred             ceEecCCCCCcEEE--cCCCCCCEEEecCCCccCCCC-------CCCCCCcccCCCCCccccccCCcc-----CCCcccH
Q 027327            2 QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVL-------HSQPKSTVGTPAYIAPEVLSRKEY-----DGKIADV   67 (225)
Q Consensus         2 ~ivHrdlkp~Nil~--~~~~~~~vkl~Dfg~a~~~~~-------~~~~~~~~g~~~y~aPE~l~~~~~-----~~~~~Di   67 (225)
                      ||.|||+|++|||+  +.+..+.+.|+|||.+--...       .+-.-...|.-.-||||+....+.     ...++|.
T Consensus       361 gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~  440 (598)
T KOG4158|consen  361 GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADT  440 (598)
T ss_pred             cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhh
Confidence            79999999999998  455666899999998742111       111112246777899999854332     2234899


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           68 WSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        68 wslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.|.+.||++....||......- + .. +...... ..+.+..+++.+++++..+|+.||++|++..
T Consensus       441 WA~GalaYEIfg~~NPFY~rGem~-L-~~-r~Yqe~q-LPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  441 WAAGALAYEIFGRSNPFYKRGEML-L-DT-RTYQESQ-LPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             hhhhhhHHHHhccCCcccccchhe-e-ch-hhhhhhh-CCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence            999999999999999998733211 0 00 0000111 1122345889999999999999999999853

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.57  E-value=5.9e-15  Score=113.62  Aligned_cols=83  Identities=45%  Similarity=0.696  Sum_probs=67.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccc-cCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVL-SRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l-~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|++|+||+|.||+++.+.  .++|+|||++.......  ......++..|++||.+ ....++. ++|+|+||+++++|
T Consensus       117 ~~i~h~di~~~ni~v~~~~--~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~~Dv~~lG~~~~~l  193 (225)
T smart00221      117 LGIVHRDLKPENILLGMDG--LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGE-AVDIWSLGVILYEL  193 (225)
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCc-hhhHHHHHHHHHHH
Confidence            3799999999999998765  79999999987654443  33445678889999998 4455554 49999999999999


Q ss_pred             HhCCCCCCC
Q 027327           78 LVGAYPFED   86 (225)
Q Consensus        78 l~g~~pf~~   86 (225)
                      ++|+.||..
T Consensus       194 ~~g~~pf~~  202 (225)
T smart00221      194 LWGPEPFSG  202 (225)
T ss_pred             HHCCCCccc
Confidence            999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.55  E-value=7.3e-15  Score=130.90  Aligned_cols=127  Identities=23%  Similarity=0.372  Sum_probs=85.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC--CCCC--CCc----ccCCCCCccccccCCc----------cCC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL--HSQP--KST----VGTPAYIAPEVLSRKE----------YDG   62 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~--~~~~--~~~----~g~~~y~aPE~l~~~~----------~~~   62 (225)
                      +||+|||||.+||||.+=+  .+.|+||..-+....  ....  ..+    ....+|+|||.+....          .-.
T Consensus       139 ~gVcHGDIKsENILiTSWN--W~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~  216 (1431)
T KOG1240|consen  139 LGVCHGDIKSENILITSWN--WLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLT  216 (1431)
T ss_pred             cCccccccccceEEEeeec--hhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccC
Confidence            5899999999999998544  689999986553221  1111  111    2344799999875422          013


Q ss_pred             CcccHHHHHHHHHHHHh-CCCCCCCCCC-------hhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           63 KIADVWSCGVTLYVMLV-GAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        63 ~~~DiwslG~il~~ll~-g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      ++.||||+||+++||++ |++||.-...       .......++++            -+..++.||..|++.||.+|.+
T Consensus       217 paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~I------------ed~~~Rnlil~Mi~rdPs~RlS  284 (1431)
T KOG1240|consen  217 PAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKI------------EDVSLRNLILSMIQRDPSKRLS  284 (1431)
T ss_pred             hhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhC------------cCccHHHHHHHHHccCchhccC
Confidence            45799999999999987 6888853110       01111111111            1336899999999999999999


Q ss_pred             HHHHhcC
Q 027327          135 IPEIQKH  141 (225)
Q Consensus       135 ~~eil~h  141 (225)
                      |++.|+-
T Consensus       285 AedyL~~  291 (1431)
T KOG1240|consen  285 AEDYLQK  291 (1431)
T ss_pred             HHHHHHh
Confidence            9999875

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.51  E-value=1.2e-14  Score=122.35  Aligned_cols=135  Identities=26%  Similarity=0.294  Sum_probs=94.3

Q ss_pred             EecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCcc------CCCcccHHHHHHHH
Q 027327            4 CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEY------DGKIADVWSCGVTL   74 (225)
Q Consensus         4 vHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~------~~~~~DiwslG~il   74 (225)
                      .|+.|++.|++++...  .+||+|||+.......   .......-...|.|||.+.+...      .+++.|+||+|+++
T Consensus        71 ~hg~l~s~nClvd~~w--~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~  148 (484)
T KOG1023|consen   71 YHGALKSSNCLVDSRW--VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM  148 (484)
T ss_pred             eeeeeccccceeeeeE--EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence            7999999999999888  7999999997654321   11111124557999999976421      24458999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhc-cc----ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILS-VH----YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      +|+++...||...........++.++.. ..    +.........+++..++..||..+|.+||++.++-.
T Consensus       149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  149 YEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             HHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            9999999999764433322334444333 11    111111135567899999999999999999998754

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.45  E-value=7.4e-13  Score=108.28  Aligned_cols=139  Identities=22%  Similarity=0.139  Sum_probs=95.7

Q ss_pred             CceEecCCCCCcEEEcCCC-C--CCEEEecCCCcc--CCCCCC--------C-CCCcccCCCCCccccccCCccCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSK-A--PRLKICDFGYSK--SSVLHS--------Q-PKSTVGTPAYIAPEVLSRKEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~--~~vkl~Dfg~a~--~~~~~~--------~-~~~~~g~~~y~aPE~l~~~~~~~~~~D   66 (225)
                      .|+|||||||.|+++.... .  ..+.|.|||+++  ......        . .....||..|+++.+..+...... .|
T Consensus       141 ~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~-DD  219 (322)
T KOG1164|consen  141 KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRR-DD  219 (322)
T ss_pred             cCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCc-hh
Confidence            4899999999999997543 1  269999999998  321111        1 123459999999999888777655 89


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +||++.++.+++.|..||...................... ......+.++..++..+-..+...+|....+...
T Consensus       220 les~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  220 LESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTD-RFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             hhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccc-cccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            9999999999999999997766433322222211111111 0112245677788777777899999988776543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.45  E-value=1.7e-14  Score=125.89  Aligned_cols=143  Identities=33%  Similarity=0.563  Sum_probs=111.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCC---CCCccc-CCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQ---PKSTVG-TPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~---~~~~~g-~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      ++.||||||+|.+++.++. .+|++|||+|..... ...   ....+| ++.|+|||...+..|.....|+||.|+++..
T Consensus       144 ~~~h~~ikP~n~~l~~s~~-~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~  222 (601)
T KOG0590|consen  144 GVTHRDIKPSNSLLDESGS-ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSA  222 (601)
T ss_pred             ccccCCCCCccchhccCCC-cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccc
Confidence            7899999999999987764 589999999976544 222   223468 9999999999987777777999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +++|..||................ ........+..++....+++.+++..+|..|.+.+++..++|+..
T Consensus       223 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  223 MLTGELPWDFPSRKDGRYSSWKSN-KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccCCCCccccccccccceeeccc-ccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            999999997655433111111100 112234455678889999999999999999999999999999987

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.26  E-value=1.7e-11  Score=94.93  Aligned_cols=123  Identities=23%  Similarity=0.304  Sum_probs=85.7

Q ss_pred             CCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccC--CCcccHHHHHHHHHHHHhCCCCC
Q 027327            7 DLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD--GKIADVWSCGVTLYVMLVGAYPF   84 (225)
Q Consensus         7 dlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~--~~~~DiwslG~il~~ll~g~~pf   84 (225)
                      -|++..++|+.+....+-.+|--++.+      .....-+|.||+||.+..++-+  ..++|+|||++++||+.+...||
T Consensus       316 ~lns~hvmidedltarismad~kfsfq------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf  389 (448)
T KOG0195|consen  316 YLNSKHVMIDEDLTARISMADTKFSFQ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF  389 (448)
T ss_pred             hcccceEEecchhhhheecccceeeee------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence            466777888776643344444333221      1233457889999999766543  34589999999999999999999


Q ss_pred             CCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           85 EDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      ...++.+.-.++...    ..+...++.++.....|++-|++.||.+||.+..++
T Consensus       390 adlspmecgmkiale----glrv~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  390 ADLSPMECGMKIALE----GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             ccCCchhhhhhhhhc----cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            987765543333222    222223346899999999999999999999987754

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.14  E-value=1e-10  Score=89.10  Aligned_cols=134  Identities=21%  Similarity=0.228  Sum_probs=91.8

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG   71 (225)
                      +++|||||||+|+|..-+. ...+.|+|||+|+.......        .+...||..|.+--...+...+.. -|+=|+|
T Consensus       130 r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRR-DDmeSvg  208 (341)
T KOG1163|consen  130 RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRR-DDMESVG  208 (341)
T ss_pred             hccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhh-hhhhhhc
Confidence            4789999999999985322 22589999999986543322        233468889988766655555444 8999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCC---CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           72 VTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP---GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        72 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      .++.++..|..||++...... .+..+++.......+   ....+|.++.-.+.-|-..--++-|...
T Consensus       209 YvLmYfnrG~LPWQglka~tk-~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~  275 (341)
T KOG1163|consen  209 YVLMYFNRGSLPWQGLKAATK-KQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM  275 (341)
T ss_pred             ceeeeeecCCCcccccchhhH-HHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence            999999999999998654322 222233332222221   2235788888888888888777778653

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.14  E-value=2.4e-10  Score=90.82  Aligned_cols=133  Identities=22%  Similarity=0.225  Sum_probs=87.4

Q ss_pred             CceEecCCCCCcEEEcCCC---CCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLDGSK---APRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~---~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      +.+|+|||||+|+||...+   ...+.++|||+|+......+        .+...||..||+--...+...+.. -|+=|
T Consensus       143 k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRR-DDLEa  221 (449)
T KOG1165|consen  143 KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRR-DDLEA  221 (449)
T ss_pred             cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhh-hhHHH
Confidence            4689999999999995322   22589999999986554333        234569999999888877777655 89999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCC---CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP---GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      ||=+++++|.|..||++..... .....++|.......+   ....++.++..-+.-.-..+-.+-|..
T Consensus       222 LGHvFmYFLRGsLPWQGLKA~t-nK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY  289 (449)
T KOG1165|consen  222 LGHVFMYFLRGSLPWQGLKADT-NKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDY  289 (449)
T ss_pred             hhhhhhhhccCCCccccccCcc-hHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence            9999999999999999865432 2333334332221111   112345555555554444455555543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.09  E-value=3.5e-10  Score=101.32  Aligned_cols=138  Identities=31%  Similarity=0.535  Sum_probs=105.1

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC---------------------C-----------CCCCCcccCCCCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL---------------------H-----------SQPKSTVGTPAYI   50 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~---------------------~-----------~~~~~~~g~~~y~   50 (225)
                      ++|||++|.|+++...+  +.++++||.......                     .           .......+|+.|.
T Consensus       925 r~h~~~~p~~~l~~~~g--h~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~l 1002 (1205)
T KOG0606|consen  925 RKHRDLKPDSLLIAYDG--HRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYL 1002 (1205)
T ss_pred             hhcccccccchhhcccC--CcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCccc
Confidence            68999999999997776  789999984321000                     0           0012235899999


Q ss_pred             ccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCC-CCCCCHHHHHHHHhhcccCC
Q 027327           51 APEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG-YVRVSLECRHLLSRIFVADP  129 (225)
Q Consensus        51 aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP  129 (225)
                      +||.+.+...... +|+|++|+++++.++|.+||......    ++++.+......++. ....+.++++++.+.|..+|
T Consensus      1003 aPe~~lg~~hgs~-ad~~~~g~~l~e~l~g~pp~na~tpq----~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~ 1077 (1205)
T KOG0606|consen 1003 APEILLGRRHGSA-ADWWSSGVCLFEVLTGIPPFNAETPQ----QIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEP 1077 (1205)
T ss_pred             CCcccccccCCCc-chhhhhhhhhhhhhcCCCCCCCcchh----hhhhccccCCCCCCCCccccChhhhhhhhhhhccCc
Confidence            9999988776545 89999999999999999999876553    344555555555443 23478899999999999999


Q ss_pred             CCCCCHH---HHhcCcccCcC
Q 027327          130 EKRITIP---EIQKHPWFLKN  147 (225)
Q Consensus       130 ~~R~s~~---eil~hp~~~~~  147 (225)
                      .+|..+.   ++..|+||...
T Consensus      1078 ~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1078 TQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             hhccCcccccccccCCccCCC
Confidence            9999887   88999999754

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.06  E-value=8.2e-11  Score=101.28  Aligned_cols=141  Identities=17%  Similarity=0.261  Sum_probs=97.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----C------CcccCCCCCccccccCCccCCCcccHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----K------STVGTPAYIAPEVLSRKEYDGKIADVWSCG   71 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~------~~~g~~~y~aPE~l~~~~~~~~~~DiwslG   71 (225)
                      ++||++|.|++|+++.++  .+||+.|+++.........    +      .......|.|||++...... .++|++|+|
T Consensus       120 k~VH~ni~p~~i~~na~~--~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~-~~sd~fSlG  196 (700)
T KOG2137|consen  120 KVVHGNIQPEAIVVNANG--DWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNT-PASDVFSLG  196 (700)
T ss_pred             ceeecccchhheeeccCc--ceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccccc-ccccceeee
Confidence            689999999999998877  6999999987644331111    1      11245679999999875554 449999999


Q ss_pred             HHHHHHHhCC-CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           72 VTLYVMLVGA-YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        72 ~il~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +++|.+..|. .-+......... ......... ...-...+++.++++-|.+++..++..||++..++..|||...
T Consensus       197 ~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~~~-~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~  271 (700)
T KOG2137|consen  197 VLIYTIYNGGKSIIAANGGLLSY-SFSRNLLNA-GAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDP  271 (700)
T ss_pred             eEEEEEecCCcchhhccCCcchh-hhhhccccc-ccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence            9999998544 444333222111 111111111 1111124688999999999999999999999999999999754

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.03  E-value=1.8e-10  Score=87.40  Aligned_cols=84  Identities=15%  Similarity=0.127  Sum_probs=59.5

Q ss_pred             CceEecCC-CCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-----C---------CcccCCCCCccccccCC-ccCCCc
Q 027327            1 MQICHRDL-KLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-----K---------STVGTPAYIAPEVLSRK-EYDGKI   64 (225)
Q Consensus         1 ~~ivHrdl-kp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-----~---------~~~g~~~y~aPE~l~~~-~~~~~~   64 (225)
                      .||||||| ||+|||++.++  .++|+|||+|.........     .         ....++.|++|+.-.-. ..+-..
T Consensus       110 ~GIvHrDL~kp~NILv~~~g--~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~  187 (218)
T PRK12274        110 CGVAHNDLAKEANWLVQEDG--SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIR  187 (218)
T ss_pred             CcCccCCCCCcceEEEcCCC--CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHH
Confidence            48999999 79999998665  6999999999854433310     0         11257778888754322 222233


Q ss_pred             ccHHHHHHHHHHHHhCCCCCCC
Q 027327           65 ADVWSCGVTLYVMLVGAYPFED   86 (225)
Q Consensus        65 ~DiwslG~il~~ll~g~~pf~~   86 (225)
                      .++++.|+-+|.++|++.++.+
T Consensus       188 ~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        188 ELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHHhcchHHHHHhccCCccc
Confidence            5778999999999999988754

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.92  E-value=5.2e-10  Score=99.93  Aligned_cols=71  Identities=27%  Similarity=0.370  Sum_probs=53.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~i   73 (225)
                      .|||||||||+|||++.++  .+||+|||+++...... .....++++.|++||...........+++|++|+-
T Consensus       123 ~gIiHrDLKP~NILl~~~g--~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         123 HGIIHRDLKPDNMLISNEG--HIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             CCEEeCCccHHHEEEcCCC--CEEEEeCCCCccccCCcccccccccCccccCccccccCCCCceeeeeeecCcC
Confidence            4899999999999998766  79999999998654332 22345789999999987554444444788888854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.90  E-value=9.3e-10  Score=90.88  Aligned_cols=55  Identities=22%  Similarity=0.261  Sum_probs=42.2

Q ss_pred             CceEecCC-CCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---------CCcccCCCCCccccccC
Q 027327            1 MQICHRDL-KLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---------KSTVGTPAYIAPEVLSR   57 (225)
Q Consensus         1 ~~ivHrdl-kp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---------~~~~g~~~y~aPE~l~~   57 (225)
                      .||+|||| ||+|||++.++  .+||+|||+|+........         .+..+++.|+|||.+..
T Consensus       130 ~gIiHrDL~KP~NILv~~~~--~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        130 AGITHNDLAKPQNWLMGPDG--EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             CCCeeCCCCCcceEEEcCCC--CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            48999999 99999997665  6999999999855433211         23357888999999853

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.86  E-value=2e-09  Score=97.34  Aligned_cols=81  Identities=30%  Similarity=0.347  Sum_probs=64.4

Q ss_pred             CceEecCCCCCcEEEcC-----CCCCCEEEecCCCccCC---CCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG-----SKAPRLKICDFGYSKSS---VLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-----~~~~~vkl~Dfg~a~~~---~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~   72 (225)
                      .+|||+||||+|+||..     ....-++|+|||.+.-+   ......+..++|-.+-.+|+..+.+.+.. +|.|.|+.
T Consensus       813 ~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq-~DyfGlAa  891 (974)
T KOG1166|consen  813 MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQ-IDYFGLAA  891 (974)
T ss_pred             cceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchh-hhhHHHHH
Confidence            48999999999999932     12225999999998643   33334455678999999999999998777 89999999


Q ss_pred             HHHHHHhCCC
Q 027327           73 TLYVMLVGAY   82 (225)
Q Consensus        73 il~~ll~g~~   82 (225)
                      +++.||.|+.
T Consensus       892 ~~h~mLFG~y  901 (974)
T KOG1166|consen  892 TVHVMLFGKY  901 (974)
T ss_pred             HHHHHHHHHH
Confidence            9999998853

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.81  E-value=7.7e-10  Score=85.45  Aligned_cols=63  Identities=13%  Similarity=0.172  Sum_probs=44.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|++|||+||.||+++.++   ++|+|||............           -.+....|.. ++|+||||+++..+.
T Consensus       154 ~gi~H~Dikp~Nili~~~g---i~liDfg~~~~~~e~~a~d-----------~~vler~y~~-~~di~~lg~~~~~~~  216 (232)
T PRK10359        154 HGMVSGDPHKGNFIVSKNG---LRIIDLSGKRCTAQRKAKD-----------RIDLERHYGI-KNEIKDLGYYLLIYK  216 (232)
T ss_pred             cCCccCCCChHHEEEeCCC---EEEEECCCcccccchhhHH-----------HHHHHhHhcc-cccccceeEeehHHH
Confidence            4899999999999998655   9999999876442211111           1233344554 489999999987653

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.60  E-value=3.7e-08  Score=83.73  Aligned_cols=135  Identities=19%  Similarity=0.185  Sum_probs=95.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC------CcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~------~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +++|-|+||.||++..+.. ..+++|||+...........      ...+...|++||.+.+.. . .+.|++++|.++.
T Consensus       242 ~~~~~~~kp~~i~~~~~~~-s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~-~-~~~di~sl~ev~l  318 (524)
T KOG0601|consen  242 NIVHDDLKPANIFTTSDWT-SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLA-T-FASDIFSLGEVIL  318 (524)
T ss_pred             cccccccchhheecccccc-eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcccc-c-hHhhhcchhhhhH
Confidence            6899999999999987742 68999999987654443221      124677899999986443 3 3489999999999


Q ss_pred             HHHhCCCCCCCC--CChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           76 VMLVGAYPFEDP--EDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        76 ~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +..++..+....  ..+..+...       ..+.......+.++...+..|+..+|..|++++.+++|+++..
T Consensus       319 ~~~l~~~~~~~g~~~~W~~~r~~-------~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  319 EAILGSHLPSVGKNSSWSQLRQG-------YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hhHhhcccccCCCCCCccccccc-------cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            998887665433  221111111       1111112235667777999999999999999999999998864

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.42  E-value=3.4e-07  Score=73.15  Aligned_cols=133  Identities=15%  Similarity=0.261  Sum_probs=81.6

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-----CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-----HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-----~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      |+|+++....|++..++  -+|+.--........     ........+.++|.+||.=......+. +|||++|+...+|
T Consensus       199 iihgnlTc~tifiq~ng--LIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a-~dIy~fgmcAlem  275 (458)
T KOG1266|consen  199 IIHGNLTCDTIFIQHNG--LIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGA-SDIYKFGMCALEM  275 (458)
T ss_pred             cccCCcchhheeecCCc--eEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccc-hhhhhhhHHHHHH
Confidence            79999999999998766  566543211110000     011112246778999987654444445 8999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ..+..--............+....   +..     -..--+.++.+||+-.|..||++..++.||...+
T Consensus       276 ailEiq~tnseS~~~~ee~ia~~i---~~l-----en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  276 AILEIQSTNSESKVEVEENIANVI---IGL-----ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             HHheeccCCCcceeehhhhhhhhe---eec-----cCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence            887654222211111111111110   110     0122368999999999999999999999997654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.37  E-value=1.5e-06  Score=71.86  Aligned_cols=133  Identities=15%  Similarity=0.168  Sum_probs=84.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc-----CCccCCCcccHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS-----RKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~-----~~~~~~~~~DiwslG~il~~   76 (225)
                      |-+-+|++++|+|++..+  .|.|.|-..-............+|...|.+||.-.     +...+.. .|.|-||+++++
T Consensus       137 Gh~vGDVn~~~~lVsd~~--~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~-hD~FGLavLiF~  213 (637)
T COG4248         137 GHVVGDVNQNSFLVSDDS--KVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTAN-HDNFGLAVLIFH  213 (637)
T ss_pred             CCcccccCccceeeecCc--eEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCcc-ccchhHHHHHHH
Confidence            445689999999998776  68887744322223333445567999999999864     2223333 799999999999


Q ss_pred             HHhC-CCCCCCCCCh----hHHHHHHH--------H---HhcccccCCCCCCCCHHHHHHHHhhccc--CCCCCCCHHH
Q 027327           77 MLVG-AYPFEDPEDP----RNFKTTIQ--------R---ILSVHYSIPGYVRVSLECRHLLSRIFVA--DPEKRITIPE  137 (225)
Q Consensus        77 ll~g-~~pf~~~~~~----~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~li~~~l~~--dP~~R~s~~e  137 (225)
                      ++.| +.||.+....    ..+...+.        +   -.......+++.-+++.+..|..+|+..  ++.-|||++.
T Consensus       214 lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         214 LLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             HHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence            9986 9999764211    11111110        0   0011112223334678899999999985  4668999753

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.15  E-value=1.1e-06  Score=74.89  Aligned_cols=133  Identities=23%  Similarity=0.221  Sum_probs=87.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCC--ccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI--APEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~--aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +.++|+|+||+||++..++ ...++.|||.+..+....  ....+.-++.  +|.......+..+ +|++|||..+.+.+
T Consensus       385 ~~~~~~d~~psni~i~~~~-~~~~~~~~~~~t~~~~~~--~~~~~~~r~~p~~~~~~e~~~~~~~-~~~~sl~~~~~e~~  460 (524)
T KOG0601|consen  385 KLFVHLDVKPSNILISNDG-FFSKLGDFGCWTRLAFSS--GVFHHIDRLYPIAEILLEDYPHLSK-ADIFSLGLSVDEAI  460 (524)
T ss_pred             hhhhcccccccceeeccch-hhhhccccccccccceec--ccccccccccccchhhccccccccc-cccccccccccccc
Confidence            4689999999999998754 367999999986422111  1122333333  4545555555545 89999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++...-......       ..+....  .+........+..+.+.+...++..|+.+.++..|.-|..
T Consensus       461 ~~~~ls~~~~~~-------~~i~~~~--~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  461 TGSPLSESGVQS-------LTIRSGD--TPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             cCcccCcccccc-------eeeeccc--ccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence            886533221111       1111221  1222234477889999999999999999999988876643

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.13  E-value=1.6e-06  Score=67.94  Aligned_cols=31  Identities=29%  Similarity=0.443  Sum_probs=27.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .||+||||||.|||++.++  .++|+|||.+..
T Consensus       161 ~GI~HrDlkp~NILv~~~~--~v~LIDfg~~~~  191 (239)
T PRK01723        161 AGVYHADLNAHNILLDPDG--KFWLIDFDRGEL  191 (239)
T ss_pred             CCCCCCCCCchhEEEcCCC--CEEEEECCCccc
Confidence            4899999999999998665  699999998764

>smart00090 RIO RIO-like kinase

Probab=97.99  E-value=4.6e-06  Score=65.27  Aligned_cols=29  Identities=28%  Similarity=0.332  Sum_probs=25.4

Q ss_pred             c-eEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            2 Q-ICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         2 ~-ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      | |+||||||+||+++ .+  .++|+|||.+..
T Consensus       168 g~iiH~Dikp~NIli~-~~--~i~LiDFg~a~~  197 (237)
T smart00090      168 GELVHGDLSEYNILVH-DG--KVVIIDVSQSVE  197 (237)
T ss_pred             CCEEeCCCChhhEEEE-CC--CEEEEEChhhhc
Confidence            6 99999999999998 44  699999998764

>PRK10345 hypothetical protein; Provisional

Probab=97.90  E-value=8.4e-06  Score=62.55  Aligned_cols=31  Identities=23%  Similarity=0.155  Sum_probs=24.0

Q ss_pred             CceEecCCCCCcEEEcCC--CCCCEEEecCCCc
Q 027327            1 MQICHRDLKLENTLLDGS--KAPRLKICDFGYS   31 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~--~~~~vkl~Dfg~a   31 (225)
                      .+||||||||+|||++..  +...++|+||+-+
T Consensus       124 ~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        124 NRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             CCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            489999999999999743  2336999995543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.71  E-value=3e-05  Score=58.76  Aligned_cols=30  Identities=33%  Similarity=0.554  Sum_probs=26.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .|++|||++|.||+++ ++  .++++|||++..
T Consensus       109 ~gi~H~Dl~~~Nil~~-~~--~~~liDfg~a~~  138 (199)
T TIGR03724       109 AGIVHGDLTTSNIIVR-DD--KLYLIDFGLGKY  138 (199)
T ss_pred             CCeecCCCCcceEEEE-CC--cEEEEECCCCcC
Confidence            4899999999999998 33  699999998864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.64  E-value=3.8e-05  Score=58.72  Aligned_cols=30  Identities=30%  Similarity=0.519  Sum_probs=25.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .|++|||++|.|||++ ++  .++|+|||.+..
T Consensus       114 ~~i~H~Dl~p~Nil~~-~~--~~~liDf~~a~~  143 (211)
T PRK14879        114 AGIIHGDLTTSNMILS-GG--KIYLIDFGLAEF  143 (211)
T ss_pred             CCcccCCCCcccEEEE-CC--CEEEEECCcccC
Confidence            4799999999999998 33  699999998764

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.63  E-value=2.5e-05  Score=68.45  Aligned_cols=30  Identities=37%  Similarity=0.558  Sum_probs=25.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .||+||||||+|||++ ++  .++|+|||+++.
T Consensus       447 ~giiHrDlkp~NILl~-~~--~~~liDFGla~~  476 (535)
T PRK09605        447 AGIVHGDLTTSNFIVR-DD--RLYLIDFGLGKY  476 (535)
T ss_pred             CCCccCCCChHHEEEE-CC--cEEEEeCccccc
Confidence            4899999999999994 33  699999999874

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.59  E-value=5.4e-05  Score=56.26  Aligned_cols=29  Identities=34%  Similarity=0.617  Sum_probs=25.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      ||||+||.++||++.+..   +.++|||++..
T Consensus       112 givHGDLTtsNiIl~~~~---i~~IDfGLg~~  140 (204)
T COG3642         112 GIVHGDLTTSNIILSGGR---IYFIDFGLGEF  140 (204)
T ss_pred             CeecCCCccceEEEeCCc---EEEEECCcccc
Confidence            899999999999997554   99999999863

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.59  E-value=5.8e-05  Score=64.38  Aligned_cols=32  Identities=22%  Similarity=0.245  Sum_probs=28.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS   34 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~   34 (225)
                      .|++|+|+||.||++..++  .++++|||++...
T Consensus       276 ~g~~H~D~hPgNilv~~~g--~i~liDfG~~~~l  307 (437)
T TIGR01982       276 DGFFHADLHPGNIFVLKDG--KIIALDFGIVGRL  307 (437)
T ss_pred             CCceeCCCCcccEEECCCC--cEEEEeCCCeeEC
Confidence            3899999999999997766  7999999998754

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.42  E-value=0.00012  Score=53.89  Aligned_cols=28  Identities=43%  Similarity=0.633  Sum_probs=24.1

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|++|.||+++ ++  .++++||+.+.
T Consensus       108 ~~~HgD~~~~Nil~~-~~--~~~liDf~~a~  135 (170)
T cd05151         108 VPCHNDLLPGNFLLD-DG--RLWLIDWEYAG  135 (170)
T ss_pred             eeecCCCCcCcEEEE-CC--eEEEEeccccc
Confidence            579999999999998 33  59999999865

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.28  E-value=0.00029  Score=53.09  Aligned_cols=30  Identities=37%  Similarity=0.519  Sum_probs=23.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .||||+||.+.|||++.+   .+.++|||.+..
T Consensus       126 ~givHGDLs~~NIlv~~~---~~~iIDf~qav~  155 (188)
T PF01163_consen  126 AGIVHGDLSEYNILVDDG---KVYIIDFGQAVD  155 (188)
T ss_dssp             TTEEESS-STTSEEEETT---CEEE--GTTEEE
T ss_pred             cCceecCCChhhEEeecc---eEEEEecCccee
Confidence            489999999999999866   499999998753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.25  E-value=0.00018  Score=62.60  Aligned_cols=34  Identities=26%  Similarity=0.327  Sum_probs=28.1

Q ss_pred             CceEecCCCCCcEEEcCCC--CCCEEEecCCCccCC
Q 027327            1 MQICHRDLKLENTLLDGSK--APRLKICDFGYSKSS   34 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~--~~~vkl~Dfg~a~~~   34 (225)
                      .|++|+|+||.||+++.++  .+.++++|||++...
T Consensus       279 ~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        279 DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence            3899999999999997654  236999999998754

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.22  E-value=0.0015  Score=57.19  Aligned_cols=75  Identities=16%  Similarity=0.292  Sum_probs=53.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      ++++|++|.-..|+++..+  ..||++|-++........ .......-.|..|+.+.....  . .|.|-|||++++++.
T Consensus       124 ~~lvHgNv~~~SVfVn~~G--eWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~--s-~D~~~Lg~li~el~n  198 (690)
T KOG1243|consen  124 CNLVHGNVCKDSVFVNESG--EWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEW--S-IDSWGLGCLIEELFN  198 (690)
T ss_pred             CCeeeccEeeeeEEEcCCC--cEEEeeeEEEeccccCCcccccchhhhcccChhhcCcccc--c-hhhhhHHHHHHHHhC
Confidence            4799999999999998877  799999988754322221 111222334677766543332  2 699999999999998


Q ss_pred             C
Q 027327           80 G   80 (225)
Q Consensus        80 g   80 (225)
                      |
T Consensus       199 g  199 (690)
T KOG1243|consen  199 G  199 (690)
T ss_pred             c
Confidence            8

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.69  E-value=0.0017  Score=48.42  Aligned_cols=32  Identities=34%  Similarity=0.453  Sum_probs=25.8

Q ss_pred             ceEecCCCCCcEEEcCCCCC-CEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDGSKAP-RLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~-~vkl~Dfg~a~~   33 (225)
                      +|||+||..+||++...+.. .+.++|||++..
T Consensus       133 diiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  133 DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             CeecccccccceEEecCCCcCceEEEeecchhc
Confidence            69999999999999765432 358999999764

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.65  E-value=0.00035  Score=61.03  Aligned_cols=127  Identities=20%  Similarity=0.171  Sum_probs=82.9

Q ss_pred             cEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChh
Q 027327           12 NTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPR   91 (225)
Q Consensus        12 Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~   91 (225)
                      ||+..++   .+|..+|+...........++..+++.++|||+.....+... .|.|++|.-..++.-|.+|-..+... 
T Consensus       362 ~~l~s~~---~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~-p~~~~~~~~~~~~ap~~pPr~~P~~~-  436 (829)
T KOG0576|consen  362 NILGSEE---EVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGC-PDSGSLAVSAIQMAPGLPPRSSPPAV-  436 (829)
T ss_pred             ccccccc---ccccccccCCcccCcccccccCCCCCCCCCchhhcccccccC-CCccCCCcchhhcCCCCCCCCCCccc-
Confidence            7777654   489999999877666656677889999999999988888777 89999998777777776664331100 


Q ss_pred             HHHHHHHHHhcccccCCCCCCCCHHH-HHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           92 NFKTTIQRILSVHYSIPGYVRVSLEC-RHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                       ...+  ..-.....+.....+++.. +++...|+..-|..|+..-.++.|.+|..
T Consensus       437 -~~~~--g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfng  489 (829)
T KOG0576|consen  437 -LPMI--GNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNG  489 (829)
T ss_pred             -cCCC--CCCCCccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHHhcc
Confidence             0000  0000000000000111122 24778889999999999999988888864

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=96.62  E-value=0.0015  Score=52.08  Aligned_cols=32  Identities=25%  Similarity=0.301  Sum_probs=26.3

Q ss_pred             CceEecCCCCCcEEEcC-----CCCCCEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDG-----SKAPRLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-----~~~~~vkl~Dfg~a~   32 (225)
                      .||+|+|+++.|||++.     .+...+.|+||+.+.
T Consensus       157 ~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        157 AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             CcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            48999999999999974     233479999999875

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.59  E-value=0.00033  Score=66.85  Aligned_cols=134  Identities=13%  Similarity=0.085  Sum_probs=84.3

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCcc-CCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~-~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      .+|++||+.|.+|..+.  .||++++|+.+ ...........++++.|++|++...-.++.+ +|+|..|+.+|....|.
T Consensus      1361 ~v~~~Lkf~lpmIVtny--~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~r-sdilr~s~~ly~rs~~n 1437 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNY--NVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKR-SDILRRSLSLYLRSDGN 1437 (2724)
T ss_pred             chhhhhhhhccceecCC--cccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHhccc
Confidence            37899999999998776  69999999998 3333333445578888999998876667655 89999999999988777


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      .+|.     .........+........-..-.|.++......+|-+.-..||.-...+..+.|
T Consensus      1438 ~~fi-----~flq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~ 1495 (2724)
T KOG1826|consen 1438 AYFI-----FFLQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHF 1495 (2724)
T ss_pred             HHHH-----HHHHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcchhhhhcccccc
Confidence            6663     111222222221111111111123444444555555566677776666665544

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.35  E-value=0.0023  Score=48.98  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=27.1

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~   33 (225)
                      .||+|+|+++.|||++... ...+.++||+-++.
T Consensus       137 ~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  137 AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            4899999999999997664 33689999997653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK05231 homoserine kinase; Provisional

Probab=95.87  E-value=0.0063  Score=49.68  Aligned_cols=30  Identities=27%  Similarity=0.429  Sum_probs=24.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .|+||+|++|.||+++.+.  .+-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~--~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDR--LSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCc--eEEEEeccccc
Confidence            3799999999999997543  35799999765

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.62  E-value=0.012  Score=45.87  Aligned_cols=29  Identities=28%  Similarity=0.351  Sum_probs=23.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+.+.||+++...  ..-|+||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~~~~--i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGR--LSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEECCC--EEEEEeCcccC
Confidence            589999999999997543  35699999764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.49  E-value=0.016  Score=46.02  Aligned_cols=29  Identities=24%  Similarity=0.288  Sum_probs=25.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYS   31 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a   31 (225)
                      .||||+|+++-||+++.++  .+.++||-.+
T Consensus       221 ~GiVHGDlSefNIlV~~dg--~~~vIDwPQ~  249 (304)
T COG0478         221 RGIVHGDLSEFNILVTEDG--DIVVIDWPQA  249 (304)
T ss_pred             cCccccCCchheEEEecCC--CEEEEeCccc
Confidence            4899999999999999876  5999999654

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=95.39  E-value=0.014  Score=44.94  Aligned_cols=29  Identities=21%  Similarity=0.230  Sum_probs=24.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .|++|+|.+|.|+++..++   ++++||+..+
T Consensus       154 ~G~~HGD~hpgNFlv~~~~---i~iID~~~k~  182 (229)
T PF06176_consen  154 HGFYHGDPHPGNFLVSNNG---IRIIDTQGKR  182 (229)
T ss_pred             cCCccCCCCcCcEEEECCc---EEEEECcccc
Confidence            4899999999999998654   9999998654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=95.20  E-value=0.02  Score=44.44  Aligned_cols=30  Identities=30%  Similarity=0.589  Sum_probs=24.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+++.|||++++.. .+.++||..|.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~-~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKN-SVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCC-CEEEEEcccCC
Confidence            5899999999999986221 59999998764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.15  E-value=0.016  Score=47.04  Aligned_cols=30  Identities=30%  Similarity=0.447  Sum_probs=25.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .+++|+|+++.||+++.++  .+.|+||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~--~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDS--VKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCc--eEEEeeccccc
Confidence            3799999999999998665  46899999764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.09  E-value=0.022  Score=46.12  Aligned_cols=29  Identities=41%  Similarity=0.709  Sum_probs=24.7

Q ss_pred             ceEecCCCCCcEEEcCC----CCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGS----KAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~----~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+.|.|||++.+    +  .++++||..|.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~--~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETK--KLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCC--cEEEEeeCCCC
Confidence            58999999999999863    4  58999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.09  E-value=0.013  Score=45.07  Aligned_cols=29  Identities=34%  Similarity=0.487  Sum_probs=18.9

Q ss_pred             ceEecCCCCCcEEEc-CCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLD-GSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~-~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.|.|||++ .++  .+.|+||+.+.
T Consensus       167 ~~~HgD~~~~Nil~~~~~~--~i~iID~e~a~  196 (239)
T PF01636_consen  167 VLIHGDLHPGNILVDPSDG--RIGIIDFEDAG  196 (239)
T ss_dssp             EEE-SS-SGGGEEEESSTT--EEEE--GTT-E
T ss_pred             EEEEeccccccceeeeccc--eeEEEecccce
Confidence            589999999999998 333  45799998654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.93  E-value=0.026  Score=42.37  Aligned_cols=27  Identities=26%  Similarity=0.415  Sum_probs=23.5

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .+|+|+.|.|+++.+++   ++|+||+.+.
T Consensus        79 p~H~D~~~~N~~~~~~~---~~lIDwe~a~  105 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG---LRLIDWEYAG  105 (188)
T ss_pred             eecCCCCCccEEEECCC---EEEEeCCccc
Confidence            58999999999997654   8999999875

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=94.80  E-value=0.019  Score=46.23  Aligned_cols=29  Identities=31%  Similarity=0.493  Sum_probs=24.3

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+.|.||+++.++  .+.|+||+.+.
T Consensus       176 ~l~HgD~~~~Nil~~~~~--~~~iIDfe~a~  204 (296)
T cd05153         176 GVIHADLFRDNVLFDGDE--LSGVIDFYFAC  204 (296)
T ss_pred             cCCccCcCcccEEEeCCc--eEEEeehhhhc
Confidence            689999999999998654  45799998764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.68  E-value=0.029  Score=43.83  Aligned_cols=29  Identities=28%  Similarity=0.307  Sum_probs=24.1

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.|.|||+++..  .+.|+||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~~~~--~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVDPGK--FSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEeCCc--EEEEEEccccc
Confidence            479999999999998654  57899998764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=94.64  E-value=0.016  Score=50.11  Aligned_cols=84  Identities=15%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             CcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccC-------CCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           63 KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI-------PGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        63 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      .++||||+|.++.++..|...+......+... .+.+........       -....+......+..+|+-..|..||..
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~-~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~  188 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLE-ILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLP  188 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHH-HHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccch
Confidence            35999999999999999987775433322211 111111000000       0001245567789999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .++++++-|...
T Consensus       189 ~~~~k~~i~~ev  200 (725)
T KOG1093|consen  189 MELSKRCSFTEV  200 (725)
T ss_pred             hHHhcCccHHHH
Confidence            999999988754

>TIGR02721 ycfN_thiK thiamine kinase

Probab=94.62  E-value=0.03  Score=44.23  Aligned_cols=28  Identities=25%  Similarity=0.385  Sum_probs=24.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.|.||+++.++   +.|+||..+.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~---~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG---LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEeCCC---CEEEeccccC
Confidence            479999999999998654   7899998765

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=94.57  E-value=0.074  Score=50.13  Aligned_cols=110  Identities=23%  Similarity=0.254  Sum_probs=73.0

Q ss_pred             CEEEe--cCCCccCCCCCCCCCCcccCCCCCccccccCCccCCC-cccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q 027327           22 RLKIC--DFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK-IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ   98 (225)
Q Consensus        22 ~vkl~--Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~-~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~   98 (225)
                      .+.++  +|+..+................+.+||......+... ..|+|++|.....+..|..+-.....       ..
T Consensus       327 ~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~-------~~  399 (1351)
T KOG1035|consen  327 VVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV-------PV  399 (1351)
T ss_pred             eeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc-------hh
Confidence            45555  7777766555444444455667888888765555422 25999999999999877654322111       11


Q ss_pred             HHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           99 RILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      .++..        .......+++.+|+.-++++|+++.+++.|+|.+.
T Consensus       400 ~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  400 SLLDV--------LSTSELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             hhhcc--------ccchhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence            11110        01126788999999999999999999999998863

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=94.46  E-value=0.051  Score=41.20  Aligned_cols=31  Identities=23%  Similarity=0.320  Sum_probs=24.5

Q ss_pred             ceEecCCCCCcEEEcCCCCC---CEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAP---RLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~---~vkl~Dfg~a~   32 (225)
                      .++|||+.+.||++..+..+   .+.++||..++
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            57999999999999754322   48899998765

subfamily of choline kinases

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.45  E-value=0.037  Score=44.87  Aligned_cols=28  Identities=32%  Similarity=0.693  Sum_probs=23.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+++.||+++. +  .+.|+||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~-~--~i~lIDfd~~~  215 (313)
T TIGR02906       188 GFCHQDYAYHNILLKD-N--EVYVIDFDYCT  215 (313)
T ss_pred             ceEcCCCCcccEEEeC-C--cEEEEECcccc
Confidence            7899999999999976 3  48899998654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=94.37  E-value=0.04  Score=42.83  Aligned_cols=28  Identities=21%  Similarity=0.275  Sum_probs=23.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.|.||+++.++   +.++||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~---~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG---TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC---cEEEechhcC
Confidence            468999999999997654   8899998764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.17  E-value=0.041  Score=47.94  Aligned_cols=32  Identities=25%  Similarity=0.318  Sum_probs=28.1

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV   35 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~   35 (225)
                      |++|.|.+|.||+++.++  .+.+.|||+.....
T Consensus       285 gffHaDpHpGNi~v~~~g--~i~~lDfGi~g~l~  316 (517)
T COG0661         285 GFFHADPHPGNILVRSDG--RIVLLDFGIVGRLD  316 (517)
T ss_pred             CccccCCCccceEEecCC--cEEEEcCcceecCC
Confidence            789999999999998876  79999999986543

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=93.94  E-value=0.053  Score=43.48  Aligned_cols=30  Identities=23%  Similarity=0.328  Sum_probs=23.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|++|.|||++.++. .+-|+||+.+.
T Consensus       186 ~lvHGD~~~~Nilv~~~~~-~~gviDWe~a~  215 (276)
T cd05152         186 VLVHGDLHPGHILIDEDAR-VTGLIDWTEAK  215 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCC-EEEEECcHhcc
Confidence            3799999999999986431 35699999775

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=93.55  E-value=0.075  Score=43.74  Aligned_cols=29  Identities=31%  Similarity=0.417  Sum_probs=24.6

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +||+|+.|.||+++.... .+.++||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~-~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTD-VSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCC-eeeEEEccccc
Confidence            899999999999987653 37899999765

>PRK06148 hypothetical protein; Provisional

Probab=93.47  E-value=0.076  Score=50.32  Aligned_cols=33  Identities=30%  Similarity=0.465  Sum_probs=25.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCE-EEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRL-KICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~v-kl~Dfg~a~~   33 (225)
                      .++||+|+++.|||++.+....+ -|+|||-+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            36899999999999986642234 4999998753

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=93.38  E-value=0.07  Score=41.87  Aligned_cols=29  Identities=24%  Similarity=0.269  Sum_probs=24.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      |+||+||..-|||+..+   .+.++|||-|..
T Consensus       187 ~LVHgDLSEyNiL~~~~---~p~iID~~QaV~  215 (268)
T COG1718         187 GLVHGDLSEYNILVHDG---EPYIIDVSQAVT  215 (268)
T ss_pred             CcccccchhhheEEECC---eEEEEECccccc
Confidence            78999999999999733   589999998753

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=93.27  E-value=0.065  Score=44.10  Aligned_cols=33  Identities=36%  Similarity=0.476  Sum_probs=23.2

Q ss_pred             ceEecCCCCCcEEEcCCCC----------------CCEEEecCCCccCC
Q 027327            2 QICHRDLKLENTLLDGSKA----------------PRLKICDFGYSKSS   34 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~----------------~~vkl~Dfg~a~~~   34 (225)
                      +.+|-||||.|||+-++..                -.++|.||.+++..
T Consensus       299 nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  347 (434)
T PF05445_consen  299 NFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVA  347 (434)
T ss_pred             eeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhc
Confidence            5799999999999843321                13567788877643

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=93.26  E-value=0.039  Score=47.03  Aligned_cols=18  Identities=50%  Similarity=0.565  Sum_probs=15.5

Q ss_pred             CceEecCCCCCcEEEcCC
Q 027327            1 MQICHRDLKLENTLLDGS   18 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~   18 (225)
                      .||||.||||+|||+..+
T Consensus       207 cgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  207 CGIIHTDLKPENVLLCST  224 (590)
T ss_pred             cCccccCCCcceeeeecc
Confidence            489999999999999543

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.20  E-value=0.064  Score=41.01  Aligned_cols=29  Identities=34%  Similarity=0.690  Sum_probs=18.2

Q ss_pred             ceEecCCCCCcEEE-cCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLL-DGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~-~~~~~~~vkl~Dfg~a~   32 (225)
                      -+.|.|+.|.|||+ ..++  .++++||..|.
T Consensus       144 v~cHnDl~~~Nil~~~~~~--~~~lIDfEya~  173 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDG--EVKLIDFEYAG  173 (211)
T ss_dssp             EEE-S--SGGGEEETSSSS--CEEE--GTT-E
T ss_pred             eEeeccCccccEEeccCCC--eEEEecHHHHh
Confidence            36899999999999 4344  69999998764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PLN02236 choline kinase

Probab=93.05  E-value=0.095  Score=43.44  Aligned_cols=30  Identities=30%  Similarity=0.695  Sum_probs=24.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+++.|||++... ..+.++||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~-~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEET-RAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCC-CcEEEEeehhcc
Confidence            479999999999997532 269999998765

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.93  E-value=0.059  Score=44.14  Aligned_cols=17  Identities=41%  Similarity=0.477  Sum_probs=14.3

Q ss_pred             ceEecCCCCCcEEEcCC
Q 027327            2 QICHRDLKLENTLLDGS   18 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~   18 (225)
                      +.+|-||||.|||+-.+
T Consensus       303 nF~H~DLKPdNILiFds  319 (444)
T PHA03111        303 NFLHVDLKPDNILIFDS  319 (444)
T ss_pred             eeeeccCCCCcEEEecC
Confidence            57999999999998433

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=92.51  E-value=0.082  Score=43.05  Aligned_cols=29  Identities=21%  Similarity=0.302  Sum_probs=25.1

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+.+.|+|++.++  .+.++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~--~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETR--GGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCC--CEEEEEhhhcc
Confidence            799999999999998665  58899998765

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=92.49  E-value=0.13  Score=41.09  Aligned_cols=28  Identities=36%  Similarity=0.571  Sum_probs=24.4

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      ++|+|+.|.|+|.+..+  .++|+||-.|.
T Consensus       155 ~cH~Dl~~~N~l~t~~~--~l~LIDWEyAg  182 (269)
T COG0510         155 PCHNDLNPGNLLLTDKG--GLFLIDWEYAG  182 (269)
T ss_pred             eecCCCCccceEEcCCC--cEEEEecccCC
Confidence            78999999999998745  59999998765

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=92.39  E-value=0.1  Score=41.99  Aligned_cols=30  Identities=23%  Similarity=0.478  Sum_probs=24.2

Q ss_pred             eEecCCCCCcEEEcCCCCC---CEEEecCCCcc
Q 027327            3 ICHRDLKLENTLLDGSKAP---RLKICDFGYSK   32 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~---~vkl~Dfg~a~   32 (225)
                      |+|||+++.|||+..+..+   .+++.||-+++
T Consensus       217 l~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  217 LCHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             EEcCccCHHhEeEccccccccccceeecccccc
Confidence            7999999999999665432   58999997664

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK09902 hypothetical protein; Provisional

Probab=92.34  E-value=0.098  Score=40.15  Aligned_cols=32  Identities=9%  Similarity=0.054  Sum_probs=26.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .|+.|+|+.+.||+++..+...|+++||--++
T Consensus       147 ~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        147 VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            48999999999999976554459999998665

>PRK11768 serine/threonine protein kinase; Provisional

Probab=92.32  E-value=0.099  Score=42.96  Aligned_cols=27  Identities=19%  Similarity=0.161  Sum_probs=22.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      ++||+|+.+.|||++ ++   +.++||+-+.
T Consensus       197 ~liHgD~h~~NvL~~-d~---~~iIDFDd~~  223 (325)
T PRK11768        197 LRLHGDCHPGNILWR-DG---PHFVDLDDAR  223 (325)
T ss_pred             cceecCCCchhcccc-CC---cEEEeCCCCC
Confidence            689999999999995 32   6899999764

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=91.45  E-value=0.17  Score=42.71  Aligned_cols=28  Identities=18%  Similarity=0.288  Sum_probs=23.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|||+++.||++..+   .++++||-++.
T Consensus       224 ~l~HgDl~~gni~~~~~---~~~viD~E~a~  251 (401)
T PRK09550        224 ALLHGDLHTGSIFVTEE---ETKVIDPEFAF  251 (401)
T ss_pred             ceeeccCCcccEEeeCC---CcEEEeccccc
Confidence            47999999999999765   38999997664

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.33  E-value=0.22  Score=40.74  Aligned_cols=30  Identities=17%  Similarity=0.333  Sum_probs=25.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .++|+|+++.|++++...  .+-+.||+++..
T Consensus       199 ~lvHGD~~~gNlii~~~~--~~gVlDwe~~~l  228 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGR--PTGVLDWELATL  228 (321)
T ss_pred             eeeeCCcccCCEEEeCCC--eeEEEecccccc
Confidence            489999999999998766  388999998764

>PRK06149 hypothetical protein; Provisional

Probab=90.85  E-value=0.18  Score=47.77  Aligned_cols=32  Identities=22%  Similarity=0.225  Sum_probs=25.0

Q ss_pred             CceEecCCCCCcEEEcCCCCC---CEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAP---RLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~---~vkl~Dfg~a~   32 (225)
                      .|+||+|+++.|||++.+..+   ..-|+|||-+.
T Consensus       208 ~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        208 LQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             ccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            479999999999999864311   24799999865

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=90.84  E-value=0.26  Score=40.58  Aligned_cols=29  Identities=31%  Similarity=0.554  Sum_probs=23.8

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +.|.|+.+.|||++.+.. .++++||..|.
T Consensus       184 ~CHnDl~~~NiL~~~~~~-~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEG-KLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeCCCC-cEEEEcccccC
Confidence            689999999999964422 69999998764

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=90.63  E-value=0.22  Score=41.43  Aligned_cols=28  Identities=18%  Similarity=0.292  Sum_probs=23.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|||+.+.||+++...   ++++|+.++.
T Consensus       193 ~llHGDl~~gNi~~~~~~---~~~iD~e~~~  220 (370)
T TIGR01767       193 TLLHGDLHSGSIFVSEHE---TKVIDPEFAF  220 (370)
T ss_pred             eeeeccCCcccEEEcCCC---CEEEcCcccc
Confidence            579999999999997654   7899997664

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PRK12396 5-methylribose kinase; Reviewed

Probab=90.62  E-value=0.22  Score=42.04  Aligned_cols=28  Identities=18%  Similarity=0.321  Sum_probs=23.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      -+|||||+|.||+++.+.   +|++|.-++.
T Consensus       228 aLlHGDlHtGSI~v~~~~---~kvIDpEFAf  255 (409)
T PRK12396        228 ALIHGDLHTGSVFVKNDS---TKVIDPEFAF  255 (409)
T ss_pred             hhccCcCCCCCEEecCCc---eEEEcccccc
Confidence            369999999999998664   8999987764

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=89.60  E-value=0.38  Score=42.19  Aligned_cols=33  Identities=18%  Similarity=0.199  Sum_probs=27.2

Q ss_pred             ceEecCCCCCcEEEcCC--CCCCEEEecCCCccCC
Q 027327            2 QICHRDLKLENTLLDGS--KAPRLKICDFGYSKSS   34 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~--~~~~vkl~Dfg~a~~~   34 (225)
                      |++|+|-+|.||++..+  +...+.+.|||+....
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i  355 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI  355 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence            78999999999999853  3447999999997643

>PLN02876 acyl-CoA dehydrogenase

Probab=87.76  E-value=0.5  Score=43.95  Aligned_cols=31  Identities=23%  Similarity=0.447  Sum_probs=24.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .+||+|+++.|||++......+-|.||.++.
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~  256 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELST  256 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeeccc
Confidence            5899999999999975332235799999875

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=86.20  E-value=0.46  Score=39.70  Aligned_cols=28  Identities=36%  Similarity=0.629  Sum_probs=24.4

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .=|||+...||||+ +|  .|.|+||-+++.
T Consensus       343 fehrnlt~~niLId-~G--nvtLIDfklsRl  370 (488)
T COG5072         343 FEHRNLTLDNILID-EG--NVTLIDFKLSRL  370 (488)
T ss_pred             cccccccccceeee-cC--ceEEEEeeeeec
Confidence            45999999999998 45  699999999984

>PRK10593 hypothetical protein; Provisional

Probab=85.46  E-value=0.92  Score=36.78  Aligned_cols=28  Identities=21%  Similarity=0.324  Sum_probs=20.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFG   29 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg   29 (225)
                      .++|||+++.||+++......+.|.|..
T Consensus       194 sLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        194 VLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             eeEeCCCCcccEEECCCCCceEEEECch
Confidence            4799999999999975432235677765

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=83.29  E-value=0.88  Score=35.49  Aligned_cols=27  Identities=26%  Similarity=0.218  Sum_probs=23.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGY   30 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~   30 (225)
                      +.+|+|..|+||+-+..+  .+||.|-+.
T Consensus       163 ~~lHGD~np~NiM~D~~G--~lKlVDP~~  189 (308)
T PF07387_consen  163 HCLHGDCNPDNIMCDKFG--YLKLVDPVC  189 (308)
T ss_pred             CeecCCCChhheeecCCC--CEEecChhh
Confidence            579999999999998777  799999764

The function of this family is unknown.

>PLN02756 S-methyl-5-thioribose kinase

Probab=83.27  E-value=1  Score=38.31  Aligned_cols=28  Identities=14%  Similarity=0.293  Sum_probs=22.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+||.|.||+++.++   .+++|.-++.
T Consensus       231 ~L~HGDl~~g~i~~~~~~---~~~id~ef~~  258 (418)
T PLN02756        231 ALVHGDLHTGSVMVTPDS---TQVIDPEFAF  258 (418)
T ss_pred             ceeecCCCCCcEEEcCCC---ceEecchhhc
Confidence            479999999999998664   7888876553

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=81.07  E-value=1.7  Score=33.11  Aligned_cols=26  Identities=31%  Similarity=0.452  Sum_probs=19.7

Q ss_pred             ceEecCCCCCcEEEcCCCCC--CEEEec
Q 027327            2 QICHRDLKLENTLLDGSKAP--RLKICD   27 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~--~vkl~D   27 (225)
                      +|+.+||+|.||++.....+  .+.|+|
T Consensus       138 ~Iv~~dl~~~NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  138 HIVIRDLNPHNIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             CCeecCCCcccEEEEecCCCceEEEEEe
Confidence            68999999999999654433  366666

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=80.66  E-value=1.4  Score=36.49  Aligned_cols=28  Identities=18%  Similarity=0.343  Sum_probs=24.3

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYS   31 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a   31 (225)
                      |+||+|.+--||++....  .++++||--.
T Consensus       222 GlIHgDFNEFNimv~dd~--~i~vIDFPQm  249 (465)
T KOG2268|consen  222 GLIHGDFNEFNIMVKDDD--KIVVIDFPQM  249 (465)
T ss_pred             CceecccchheeEEecCC--CEEEeechHh
Confidence            899999999999998665  6999999643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	225
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-82
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-82
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-81
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		7e-81
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		8e-79
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-78
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-29
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-25
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-25
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-25
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		7e-25
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-25
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		9e-25
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-25
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-24
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-24
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-23
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-23
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-23
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-23
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		6e-23
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		8e-23
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-22
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-22
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		5e-22
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		9e-22
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		6e-21
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		8e-21
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		9e-21
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-20
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		2e-20
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-20
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-20
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-20
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-20
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-20
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-20
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-20
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-20
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-20
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-20
3soa_A	444	Full-Length Human Camkii Length = 444		5e-20
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		6e-20
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		6e-20
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		9e-20
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-19
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-19
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-19
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-19
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-19
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		5e-19
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		5e-19
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-19
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-19
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		6e-19
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-19
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		7e-19
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		7e-19
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		7e-19
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		7e-19
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		8e-19
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		8e-19
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		8e-19
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		8e-19
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		8e-19
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		9e-19
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		9e-19
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		9e-19
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		9e-19
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-18
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-18
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-18
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-18
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-18
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-18
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-18
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-18
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-18
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-18
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-18
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-18
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-18
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-18
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-18
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-18
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-18
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-18
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-18
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-18
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-18
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-18
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-18
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		4e-18
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-18
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-18
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		6e-18
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		6e-18
3kk9_A	282	Camkii Substrate Complex B Length = 282		7e-18
3kk8_A	284	Camkii Substrate Complex A Length = 284		8e-18
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-17
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-17
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-17
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-17
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-17
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-17
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-17
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-17
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-17
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-17
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-17
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-17
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-17
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-17
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-17
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-17
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-17
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-17
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-17
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-17
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-17
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-17
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-17
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-17
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-17
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-17
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-17
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-17
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-17
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-17
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-17
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-17
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-17
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-17
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-17
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-17
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-17
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-17
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-17
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-17
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		4e-17
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-17
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-17
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		5e-17
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		6e-17
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		7e-17
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		9e-17
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-16
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-16
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-16
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-16
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-16
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-16
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-16
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		3e-16
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-16
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-16
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-16
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-16
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-16
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-16
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		5e-16
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		6e-16
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		7e-16
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		9e-16
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-15
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		1e-15
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-15
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-15
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-15
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-15
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-15
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		1e-15
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-15
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-15
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-15
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-15
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-15
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-15
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-15
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-15
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-15
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		2e-15
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-15
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-15
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-15
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-15
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-15
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-15
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-15
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-15
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-15
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-15
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-15
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-15
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-15
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-15
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		3e-15
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-15
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-15
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-15
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-15
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		6e-15
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-15
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		6e-15
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-15
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		6e-15
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		7e-15
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		7e-15
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		8e-15
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		8e-15
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		9e-15
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-14
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-14
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-14
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-14
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-14
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-14
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-14
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		1e-14
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-14
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-14
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-14
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-14
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-14
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-14
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-14
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-14
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-14
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-14
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-14
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		3e-14
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-14
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		7e-14
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		7e-14
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-14
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		8e-14
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		9e-14
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		9e-14
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-13
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-13
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-13
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-13
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-13
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-13
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-13
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-13
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-13
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-13
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-13
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-13
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-13
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		5e-13
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		8e-13
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		8e-13
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		9e-13
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		9e-13
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-12
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-12
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-12
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		3e-12
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-12
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-12
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		6e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		6e-12
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		6e-12
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		7e-12
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-12
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		8e-12
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		8e-12
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		9e-12
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		9e-12
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-12
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-12
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-11
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-11
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-11
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-11
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-11
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-11
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-11
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-11
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-11
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-11
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-11
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-11
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-11
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-11
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-11
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-11
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-11
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-11
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-11
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-11
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-11
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		3e-11
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		3e-11
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-11
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-11
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-11
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-11
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-11
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-11
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-11
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-11
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-11
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-11
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		3e-11
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-11
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		4e-11
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-11
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-11
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-11
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		4e-11
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-11
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-11
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-11
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-11
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-11
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-11
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-11
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-11
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-11
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-11
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-11
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-11
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-11
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-11
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		5e-11
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-11
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-11
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-11
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-11
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-11
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-11
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-11
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-11
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		6e-11
4ae6_A	343	Structure And Function Of The Human Sperm-specific		6e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		6e-11
4ae9_A	343	Structure And Function Of The Human Sperm-specific		6e-11
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		7e-11
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-11
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		8e-11
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		8e-11
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		8e-11
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		9e-11
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-10
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-10
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-10
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		1e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-10
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-10
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-10
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		3e-10
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-10
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-10
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-10
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-10
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		4e-10
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		4e-10
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-10
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-10
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		6e-10
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		1e-09
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-09
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		3e-09
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-09
3a7f_A	303	Human Mst3 Kinase Length = 303		4e-09
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		4e-09
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-09
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-09
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-09
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-08
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-08
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-08
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-08
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-08
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-08
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-08
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-08
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-08
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-08
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		3e-08
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-08
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-08
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-08
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-08
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		3e-08
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-08
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		3e-08
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-08
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		3e-08
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-08
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-08
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-08
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-08
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-08
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		4e-08
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		4e-08
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		4e-08
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		4e-08
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		4e-08
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-08
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-08
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-08
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		4e-08
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-08
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		5e-08
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		5e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		9e-08
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-07
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-07
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-07
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-07
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-07
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-07
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-07
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-07
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-07
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-07
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-07
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-07
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-07
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-07
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-07
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-07
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-07
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		3e-07
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		5e-07
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		6e-07
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		6e-07
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		6e-07
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		7e-07
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-07
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		8e-07
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-07
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		9e-07
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		9e-07
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		9e-07
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		9e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-07
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-06
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-06
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-06
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		1e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		1e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		1e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-06
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-06
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-06
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-06
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-06
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-06
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-06
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-06
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-06
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-06
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-06
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		4e-06
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		4e-06
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-06
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		4e-06
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		4e-06
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		4e-06
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		4e-06
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		4e-06
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		4e-06
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		4e-06
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		4e-06
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		4e-06
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-06
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		4e-06
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-06
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-06
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		4e-06
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-06
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		4e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		4e-06
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		4e-06
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-06
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-06
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		4e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		4e-06
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-06
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-06
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-06
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		5e-06
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		5e-06
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		5e-06
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-06
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		5e-06
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		5e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		5e-06
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		5e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		5e-06
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		5e-06
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		5e-06
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		5e-06
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		5e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		5e-06
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		5e-06
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		5e-06
3hec_A	348	P38 In Complex With Imatinib Length = 348		6e-06
2oza_B	366	Structure Of P38alpha Complex Length = 366		6e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		6e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		6e-06
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		6e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		6e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		8e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		9e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		9e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-05
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-05
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-05
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		1e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-05
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-05
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-05
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-05
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-05
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		2e-05
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		3e-05
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-05
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-05
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-05
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-05
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		4e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-05
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		5e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		5e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		5e-05
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		5e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		5e-05
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		5e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		6e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		6e-05
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		6e-05
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-05
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		8e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		8e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		9e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		9e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		1e-04
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		1e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		1e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		1e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		1e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		1e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		1e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-04
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-04
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		2e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-04
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-04
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-04
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		2e-04
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-04
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		3e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-04
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		3e-04
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		3e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		4e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-04
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		4e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		4e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		4e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		4e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		4e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		4e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		5e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		5e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		5e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		5e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		5e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		5e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		5e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		5e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		5e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		6e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		6e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-04
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		6e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		6e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		6e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		7e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		8e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		8e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		8e-04

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 142/199 (71%), Positives = 161/199 (80%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEY
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPE+P+NF+ TI RIL+V Y+IP YV +S ECRHL
Sbjct: 193 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 252
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           +SRIFVADP KRI+IPEI+ H WFLKNLP + M ++  + Q    +   QSIEEI+ II 
Sbjct: 253 ISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFAASDQPGQSIEEIMQIIA 312
Query: 181 EARKPGEGPKFGGQCLIGG 199
           EA  P  G +     L G 
Sbjct: 313 EATVPPAGTQNLNHYLTGS 331

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 146/200 (73%), Positives = 165/200 (82%), Gaps = 2/200 (1%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEY
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPE+P+NF+ TI RIL+V Y+IP YV +S ECRHL
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQ-SQSIEEILGII 179
           +SRIFVADP KRI+IPEI+ H WFLKNLP + M ++  + Q  DE+DQ  QSIEEI+ II
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQ-FDESDQPGQSIEEIMQII 312
Query: 180 QEARKPGEGPKFGGQCLIGG 199
            EA  P  G +     L G 
Sbjct: 313 AEATVPPAGTQNLNHYLTGS 332

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score =  298 bits (762), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/200 (72%), Positives = 164/200 (82%), Gaps = 2/200 (1%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS APRLKIC FGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEY
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPE+P+NF+ TI RIL+V Y+IP YV +S ECRHL
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQ-SQSIEEILGII 179
           +SRIFVADP KRI+IPEI+ H WFLKNLP + M ++  + Q  DE+DQ  QSIEEI+ II
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQ-FDESDQPGQSIEEIMQII 312
Query: 180 QEARKPGEGPKFGGQCLIGG 199
            EA  P  G +     L G 
Sbjct: 313 AEATVPPAGTQNLNHYLTGS 332

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score =  296 bits (757), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 140/199 (70%), Positives = 160/199 (80%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+CHRDLKLENTLLDGS APRLKIC FGYSKSSVLHSQPK TVGTPAYIAPEVL +KEY
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPE+P+NF+ TI RIL+V Y+IP YV +S ECRHL
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           +SRIFVADP KRI+IPEI+ H WFLKNLP + M ++  + Q  + +   QSIEEI+ II 
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIA 313
Query: 181 EARKPGEGPKFGGQCLIGG 199
           EA  P  G +     L G 
Sbjct: 314 EATVPPAGTQNLNHYLTGS 332

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score =  289 bits (740), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 138/183 (75%), Positives = 157/183 (85%), Gaps = 2/183 (1%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQ+ HRDLKLENTLLDGS APRLKI DFGYSK+SVLHSQPKS VGTPAYIAPEVL +KEY
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGK+ADVWSCGVTLYVMLVGAYPFEDPE+P+NF+ TI RIL+V Y+IP YV +S ECRHL
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQ-SQSIEEILGII 179
           +SRIFVADP KRI+IPEI+ H WFLKNLP + M ++  + Q  DE+DQ  QSIEEI+ II
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQ-FDESDQPGQSIEEIMQII 312
Query: 180 QEA 182
            EA
Sbjct: 313 AEA 315

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score =  287 bits (735), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 138/186 (74%), Positives = 153/186 (82%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL R+EY
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDPE+PR+++ TIQRILSV YSIP  +R+S EC HL
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           +SRIFVADP  RI+IPEI+ H WFLKNLP + M E     Q  +     QS++ I+ II 
Sbjct: 255 ISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIIS 314
Query: 181 EARKPG 186
           EA  P 
Sbjct: 315 EATIPA 320

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 98/160 (61%), Gaps = 10/160 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDLK EN LLD +    +KI DFG S      +  K++ G+P Y APEV++ K Y 
Sbjct: 128 KIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   DVWSCG+ LYVMLVG  PF+D   P  FK    ++ S  Y +P +  +S   + L+
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----KVNSCVYVMPDF--LSPGAQSLI 239
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLP--IEFMEEDEGS 159
            R+ VADP +RITI EI++ PWF  NLP  +  MEE +GS
Sbjct: 240 RRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGS 279

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDLK EN LLD      +KI DFG+S    +  +  +  G+P Y APE+   K+YD
Sbjct: 131 RIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLL 242
Query: 122 SRIFVADPEKRITIPEIQKHPW 143
            R  V +P KR T+ +I K  W
Sbjct: 243 KRFLVLNPIKRGTLEQIMKDRW 264

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDLK EN LLD      +KI DFG+S    +  +  +  G P Y APE+   K+YD
Sbjct: 134 RIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLL 245
Query: 122 SRIFVADPEKRITIPEIQKHPW 143
            R  V +P KR T+ +I K  W
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRW 267

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   K+YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 123 RIFVADPEKRITIPEIQKHPW 143
           +  + +P KR T+ +I K  W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   K+YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 123 RIFVADPEKRITIPEIQKHPW 143
           +  + +P KR T+ +I K  W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   K+YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 123 RIFVADPEKRITIPEIQKHPW 143
           +  + +P KR T+ +I K  W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   K+YDG
Sbjct: 127 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 238
Query: 123 RIFVADPEKRITIPEIQKHPW 143
           +  + +P KR T+ +I K  W
Sbjct: 239 KFLILNPSKRGTLEQIMKDRW 259

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score =  109 bits (273), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S      ++  +  G P Y APE+   K+YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 123 RIFVADPEKRITIPEIQKHPW 143
           +  + +P KR T+ +I K  W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S      ++     G+P Y APE+   K+YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 123 RIFVADPEKRITIPEIQKHPW 143
           +  + +P KR T+ +I K  W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S      ++  +  G P Y APE+   K+YDG
Sbjct: 134 IVHRDLKAENLLLDADX--NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y   S +C +LL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--XSTDCENLLK 245
Query: 123 RIFVADPEKRITIPEIQKHPW 143
           +  + +P KR T+ +I K  W
Sbjct: 246 KFLILNPSKRGTLEQIXKDRW 266

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G
Sbjct: 132 VVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D+WSCGV LY +L G  PF+D   P  FK    +I    + IP Y+  S+    LL 
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFK----KIRGGVFYIPEYLNRSVAT--LLM 243
Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLP 149
            +   DP KR TI +I++H WF ++LP
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQDLP 270

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK EN LLD       KI DFG S         + + G+P Y APEV+S + Y G
Sbjct: 132 VVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D+WSCGV LY +L G  PF+D   P  FK    +I    + IP Y+  S+    LL 
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFK----KIRGGVFYIPEYLNRSVAT--LLM 243
Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLP 149
            +   DP KR TI +I++H WF ++LP
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQDLP 270

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 8/153 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDLK EN LLD  +   +KI DFG S      +  K++ G+P Y APEV+S K Y 
Sbjct: 133 KIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   DVWSCGV LYVML    PF+D   P  FK     +    Y++P +  +S     L+
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLI 244
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLPIEFME 154
            R+ + +P  RI+I EI +  WF  +LP   +E
Sbjct: 245 KRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLE 277

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  103 bits (258), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDLK EN LLD  +   +KI DFG S      +  K++ G+P Y APEV+S K Y 
Sbjct: 132 KIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   DVWSCGV LYVML    PF+D   P  FK     +    Y++P +  +S     L+
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLI 243
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLP 149
            R+ + +P  RI+I EI +  WF  +LP
Sbjct: 244 KRMLIVNPLNRISIHEIMQDDWFKVDLP 271

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  103 bits (258), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDLK EN LLD  +   +KI DFG S      +  K++ G+P Y APEV+S K Y 
Sbjct: 127 KIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   DVWSCGV LYVML    PF+D   P  FK     +    Y++P +  +S     L+
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLI 238
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLP 149
            R+ + +P  RI+I EI +  WF  +LP
Sbjct: 239 KRMLIVNPLNRISIHEIMQDDWFKVDLP 266

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  103 bits (257), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRDLK EN LLD  +   +KI DFG S      +  K++ G+P Y APEV+S K Y 
Sbjct: 123 KIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   DVWSCGV LYVML    PF+D   P  FK     +    Y++P +  +S     L+
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLI 234
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLP 149
            R+ + +P  RI+I EI +  WF  +LP
Sbjct: 235 KRMLIVNPLNRISIHEIMQDDWFKVDLP 262

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 2   QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRDLK EN LL+  S+   +KI DFG S    +  + K  +GT  YIAPEVL RK+Y
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKY 182
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECR 118
           D K  DVWSCGV LY++L G  PF    D    +  ++R+    +S   P + +VS E +
Sbjct: 183 DEK-CDVWSCGVILYILLCGYPPFGGQTD----QEILKRVEKGKFSFDPPDWTQVSDEAK 237
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
            L+  +   +P KRI+  E   HPW +K
Sbjct: 238 QLVKLMLTYEPSKRISAEEALNHPWIVK 265

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 2   QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRDLK EN LL+  S+   +KI DFG S    +  + K  +GT  YIAPEVL RK+Y
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKY 199
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECR 118
           D K  DVWSCGV LY++L G  PF    D    +  ++R+    +S   P + +VS E +
Sbjct: 200 DEK-CDVWSCGVILYILLCGYPPFGGQTD----QEILKRVEKGKFSFDPPDWTQVSDEAK 254
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
            L+  +   +P KRI+  E   HPW +K
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNHPWIVK 282

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  100 bits (250), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK EN LLD       KI DFG S         + + G+P Y APEV+S + Y G
Sbjct: 137 VVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D+WS GV LY +L G  PF+D   P  FK     I    +  P Y+  S+    LL 
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI----FYTPQYLNPSVIS--LLK 248
Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLPIEFMEED 156
            +   DP KR TI +I++H WF ++LP     ED
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQDLPKYLFPED 282

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 8/142 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLDG     +KI DFG+S    + ++  +  G+P Y APE+   K+YDG
Sbjct: 135 IVHRDLKAENLLLDGDM--NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDG 192
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF    D +N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 246
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
           ++ V +P KR ++ +I K  W 
Sbjct: 247 KLLVLNPIKRGSLEQIMKDRWM 268

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 97.1 bits (240), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKEY 60
           I HRDLK EN LL   SK   +K+ DFG +       Q      GTP Y++PEVL +  Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECR 118
            GK  D+W+CGV LY++LVG  PF D +  R +    Q+I +  Y  P   +  V+ E +
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFPSPEWDTVTPEAK 238
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM 153
            L++++   +P KRIT  E  KHPW  +   +  M
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASM 273

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 97.1 bits (240), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 1   MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRK 58
           M + HRDLK EN LL    K   +K+ DFG +       Q      GTP Y++PEVL RK
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL-RK 180
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
           E  GK  D+W+CGV LY++LVG  PF D +  + +    Q+I +  Y  P   +  V+ E
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLY----QQIKAGAYDFPSPEWDTVTPE 236
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM 153
            ++L++++   +P KRIT  E  KHPW  +   +  M
Sbjct: 237 AKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASM 273

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 96.7 bits (239), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKEY 60
           I HRDLK EN LL   SK   +K+ DFG +       Q      GTP Y++PEVL +  Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECR 118
            GK  D+W+CGV LY++LVG  PF D +  R +    Q+I +  Y  P   +  V+ E +
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFPSPEWDTVTPEAK 238
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM 153
            L++++   +P KRIT  E  KHPW  +   +  M
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASM 273

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRK 58
           M + HRDLK EN LL    K   +K+ DFG +       Q      GTP Y++PEVL + 
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
            Y GK  D+W+CGV LY++LVG  PF D +  R +    Q+I +  Y  P   +  V+ E
Sbjct: 200 PY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFPSPEWDTVTPE 254
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            + L++++   +P KRIT  E  KHPW
Sbjct: 255 AKDLINKMLTINPSKRITAAEALKHPW 281

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 150 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 208
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 209 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 266
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 267 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 301

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 142 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 200
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 201 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 258
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 259 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 293

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 186 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 244
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 245 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 302
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 303 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 337

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 141 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 199
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 200 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 257
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 258 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 292

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 140 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 198
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 199 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 256
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 257 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 291

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 136 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 195 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 252
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 253 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 287

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 180 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 239 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 296
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 136 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 195 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 252
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 253 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 287

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 134 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 193 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 250
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 251 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 285

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 135 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 193
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 194 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 251
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 252 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 286

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           I HRDLK EN LL  + AP   LKI DFG SK        K+  GTP Y APE+L    Y
Sbjct: 169 IVHRDLKPEN-LLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY 227
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECR 118
            G   D+WS G+  Y++L G  PF D    R  +   +RIL+  Y    P +  VSL  +
Sbjct: 228 -GPEVDMWSVGIITYILLCGFEPFYDE---RGDQFMFRRILNCEYYFISPWWDEVSLNAK 283
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGI 178
            L+ ++ V DP+KR+T  +  +HPW +      F+  D    +  + N + +    +  +
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPW-VTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAV 342
Query: 179 IQEAR 183
           +  +R
Sbjct: 343 VASSR 347

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 94.0 bits (232), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRK 58
           M + HR+LK EN LL    K   +K+ DFG +       Q      GTP Y++PEVL + 
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
            Y GK  D+W+CGV LY++LVG  PF D +  R +    Q+I +  Y  P   +  V+ E
Sbjct: 189 PY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFPSPEWDTVTPE 243
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            + L++++   +P KRIT  E  KHPW
Sbjct: 244 AKDLINKMLTINPSKRITAAEALKHPW 270

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+       TP Y+APEVL  +
Sbjct: 134 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 193 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 250
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 251 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 285

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 33/160 (20%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVL 55
           +I HRD+K  N L+  DG     +KI DFG S     S  L S   +TVGTPA++APE L
Sbjct: 157 KIIHRDIKPSNLLVGEDG----HIKIADFGVSNEFKGSDALLS---NTVGTPAFMAPESL 209
Query: 56  S--RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI------ 107
           S  RK + GK  DVW+ GVTLY  + G  PF D           +RI+ +H  I      
Sbjct: 210 SETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD-----------ERIMCLHSKIKSQALE 258
Query: 108 -PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
            P    ++ + + L++R+   +PE RI +PEI+ HPW  +
Sbjct: 259 FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 3   ICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKEY 60
           I HRDLK EN LL    K   +K+ DFG +       Q      GTP Y++PEVL +  Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECR 118
            GK  D+W+CGV LY++LVG  PF D +  + +    Q+I +  Y  P   +  V+ E +
Sbjct: 211 -GKPVDIWACGVILYILLVGYPPFWDEDQHKLY----QQIKAGAYDFPSPEWDTVTPEAK 265
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM 153
           +L++++   +P KRIT  +  KHPW  +   +  M
Sbjct: 266 NLINQMLTINPAKRITADQALKHPWVCQRSTVASM 300

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTPA++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF         + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLGDTK----QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 1   MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + I HRDLK EN L     +  ++ I DFG SK     S   +  GTP Y+APEVL++K 
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLEC 117
           Y  K  D WS GV  Y++L G  PF D  D + F    ++IL   Y    P +  +S   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLF----EQILKAEYEFDSPYWDDISDSA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
           +  +  +   DPEKR T  +  +HPW   +  ++
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 1   MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + I HRDLK EN L     +  ++ I DFG SK     S   +  GTP Y+APEVL++K 
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLEC 117
           Y  K  D WS GV  Y++L G  PF D  D + F    ++IL   Y    P +  +S   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLF----EQILKAEYEFDSPYWDDISDSA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
           +  +  +   DPEKR T  +  +HPW   +  ++
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 1   MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + I HRDLK EN L     +  ++ I DFG SK     S   +  GTP Y+APEVL++K 
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLEC 117
           Y  K  D WS GV  Y++L G  PF D  D + F    ++IL   Y    P +  +S   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLF----EQILKAEYEFDSPYWDDISDSA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
           +  +  +   DPEKR T  +  +HPW   +  ++
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 1   MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + I HRDLK EN L     +  ++ I DFG SK     S   +  GTP Y+APEVL++K 
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLEC 117
           Y  K  D WS GV  Y++L G  PF D  D + F    ++IL   Y    P +  +S   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLF----EQILKAEYEFDSPYWDDISDSA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
           +  +  +   DPEKR T  +  +HPW   +  ++
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 13/145 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD  K   +KI DFG  K ++L  ++     GTP YIAPE+L  ++Y+
Sbjct: 140 IVYRDLKLDNILLD--KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHL 120
             + D WS GV LY ML+G  PF   ++   F        S+    P Y R +  E + L
Sbjct: 198 HSV-DWWSFGVLLYEMLIGQSPFHGQDEEELFH-------SIRMDNPFYPRWLEKEAKDL 249
Query: 121 LSRIFVADPEKRITIP-EIQKHPWF 144
           L ++FV +PEKR+ +  +I++HP F
Sbjct: 250 LVKLFVREPEKRLGVRGDIRQHPLF 274

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 1   MQICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           M I HRDLK EN L     +  ++ I DFG SK         +  GTP Y+APEVL++K 
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLEC 117
           Y  K  D WS GV  Y++L G  PF D  D + F    ++IL   Y    P +  +S   
Sbjct: 199 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDSKLF----EQILKAEYEFDSPYWDDISDSA 253
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  +  +   DP KR T  +  +HPW
Sbjct: 254 KDFIRNLMEKDPNKRYTCEQAARHPW 279

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 13/145 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD  K   +KI DFG  K ++L  ++     GTP YIAPE+L  ++Y+
Sbjct: 139 IVYRDLKLDNILLD--KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLECRHL 120
             + D WS GV LY ML+G  PF   ++   F        S+    P Y R +  E + L
Sbjct: 197 HSV-DWWSFGVLLYEMLIGQSPFHGQDEEELFH-------SIRMDNPFYPRWLEKEAKDL 248
Query: 121 LSRIFVADPEKRITIP-EIQKHPWF 144
           L ++FV +PEKR+ +  +I++HP F
Sbjct: 249 LVKLFVREPEKRLGVRGDIRQHPLF 273

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 2   QICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRDLK EN LL+   K   +KI DFG S     +++ K  +GT  YIAPEVL R  Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTY 199
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
           D K  DVWS GV LY++L G  PF      +N    ++R+ +  Y+  +P +  +S + +
Sbjct: 200 DEK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
            L+ ++    P  RIT  +  +HPW  K
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +  H+   +   TP Y+APEVL  +
Sbjct: 180 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
           +YD K  D WS GV  Y++L G  PF              RI    Y  P   +  VS E
Sbjct: 239 KYD-KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEE 297
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
            + L+  +   +P +R TI E   HPW  ++  +
Sbjct: 298 VKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKV 331

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++  
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY- 191
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
           E  G  AD+WS GV  Y++L GA PF         + T+  + +V+Y      +   S  
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTK----QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF         + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLGDTK----QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 192 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 246
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPW 273

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 192 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 246
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPW 273

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF    D +  + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L     P  R+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF         + T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLGDTK----QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            +  + R+ V DP+KR+TI +  +HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 124 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 238
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWYNKPL 267

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRD+K EN LLD  +   LKI DFG +     +++ +      GT  Y+APE+L R+E
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  DVWSCG+ L  ML G  P++ P D     +  +   +  Y  P + ++      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           LL +I V +P  RITIP+I+K  W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 2   QICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRDLK EN LL+   K   +KI DFG S     +++ K  +GT  YIAPEVL R  Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTY 199
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
           D K  DVWS GV LY++L G  PF      +N    ++R+ +  Y+  +P +  +S + +
Sbjct: 200 DEK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
            L+ ++    P  RIT  +  +HPW  K
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 2   QICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRDLK EN LL+   K   +KI DFG S     +++ K  +GT  YIAPEVL R  Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTY 199
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
           D K  DVWS GV LY++L G  PF      +N    ++R+ +  Y+  +P +  +S + +
Sbjct: 200 DEK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
            L+ ++    P  RIT  +  +HPW  K
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HR+LK EN LL   +K   +K+ DFG +             GTP Y++PEVL +  Y 
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 207
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K  D+W+CGV LY++LVG  PF D +  R +     +  +  Y  P +  V+ E + L+
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKSLI 265
Query: 122 SRIFVADPEKRITIPEIQKHPWF 144
             +   +P+KRIT  +  K PW 
Sbjct: 266 DSMLTVNPKKRITADQALKVPWI 288

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDL L N LL  ++   +KI DFG +    + H +  +  GTP YI+PE+ +R  + 
Sbjct: 133 ILHRDLTLSNLLL--TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH- 189
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G  +DVWS G   Y +L+G  PF    D    K T+ +++   Y +P +  +S+E + L+
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPF----DTDTVKNTLNKVVLADYEMPSF--LSIEAKDLI 243
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEG 158
            ++   +P  R+++  +  HP+  +N   +   +DEG
Sbjct: 244 HQLLRRNPADRLSLSSVLDHPFMSRNSSTK--SKDEG 278

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 2   QICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRDLK EN LL+   K   +KI DFG S       + K  +GT  YIAPEVL RK+Y
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKKY 214
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECR 118
           D K  DVWS GV L+++L G  PF    D    +  ++++    Y+   P +  VS   +
Sbjct: 215 DEK-CDVWSIGVILFILLAGYPPFGGQTD----QEILRKVEKGKYTFDSPEWKNVSEGAK 269
Query: 119 HLLSRIFVADPEKRITIPEIQKHPW 143
            L+ ++   D ++RI+  +  +HPW
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPW 294

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 15/152 (9%)
Query: 3   ICHRDLKLENTL-LDGSKAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLS 56
           + HRDLK  N L +D S  P  ++ICDFG++K   L ++    + TP Y    +APEVL 
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLE 193
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFED-PEDPRNFKTTIQRILSVHYSIPG--YVRV 113
           R+ YD    D+WS GV LY ML G  PF + P+D    +  + RI S  +S+ G  +  V
Sbjct: 194 RQGYDAA-CDIWSLGVLLYTMLTGYTPFANGPDDTP--EEILARIGSGKFSLSGGYWNSV 250
Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFL 145
           S   + L+S++   DP +R+T   + +HPW +
Sbjct: 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HR+LK EN LL   +K   +K+ DFG +             GTP Y++PEVL +  Y 
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K  D+W+CGV LY++LVG  PF D +  R +     +  +  Y  P +  V+ E + L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKSLI 242
Query: 122 SRIFVADPEKRITIPEIQKHPW 143
             +   +P+KRIT  +  K PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPW 264

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HR+LK EN LL   +K   +K+ DFG +             GTP Y++PEVL +  Y 
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 183
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K  D+W+CGV LY++LVG  PF D +  R +     +  +  Y  P +  V+ E + L+
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKSLI 241
Query: 122 SRIFVADPEKRITIPEIQKHPW 143
             +   +P+KRIT  +  K PW
Sbjct: 242 DSMLTVNPKKRITADQALKVPW 263

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HR+LK EN LL   +K   +K+ DFG +             GTP Y++PEVL +  Y 
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K  D+W+CGV LY++LVG  PF D +  R +     +  +  Y  P +  V+ E + L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKSLI 242
Query: 122 SRIFVADPEKRITIPEIQKHPW 143
             +   +P+KRIT  +  K PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPW 264

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 154 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 210
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V      R L+
Sbjct: 211 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDLI 263
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 3   ICHRDLKLENTL-LDGSKAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLS 56
           + HRDLK  N L +D S  P  L+ICDFG++K   L ++    + TP Y    +APEVL 
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLK 198
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFED-PEDPRNFKTTIQRILSVHYSIPG--YVRV 113
           R+ YD +  D+WS G+ LY ML G  PF + P D    +  + RI S  +++ G  +  V
Sbjct: 199 RQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTP--EEILTRIGSGKFTLSGGNWNTV 255
Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLK--NLPIEFMEEDEGSMQKG 163
           S   + L+S++   DP +R+T  ++ +HPW  +   LP   +   +  + KG
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKG 307

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 145 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V      R L+
Sbjct: 202 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDLI 254
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWITAN 280

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 94/173 (54%), Gaps = 19/173 (10%)
Query: 3   ICHRDLKLENTL-LDGSKAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLS 56
           + HRDLK  N L +D S  P  L+ICDFG++K   L ++    + TP Y    +APEVL 
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLK 198
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFED-PED-PRNFKTTIQRILSVHYSIPG--YVR 112
           R+ YD +  D+WS G+ LY ML G  PF + P D P    T   RI S  +++ G  +  
Sbjct: 199 RQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILT---RIGSGKFTLSGGNWNT 254
Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK--NLPIEFMEEDEGSMQKG 163
           VS   + L+S++   DP +R+T  ++ +HPW  +   LP   +   +  + KG
Sbjct: 255 VSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKG 307

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS    LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 132 RVIHRDIKPENLLL-GSNG-ELKIADFGWSVHAP-SSRRDTLCGTLDYLPPEMIEGRMHD 188
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 189 EKV-DLWSLGVLCYEFLVGMPPFE----AHTYQETYRRISRVEFTFPDFV--TEGARDLI 241
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +  +R+T+ E+ +HPW   N
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPWIKAN 267

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 131 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMHD 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 188 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 240
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 133 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 190 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 242
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS    LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 132 RVIHRDIKPENLLL-GSNG-ELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 189 EKV-DLWSLGVLCYEFLVGMPPFE----AHTYQETYRRISRVEFTFPDFV--TEGARDLI 241
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +  +R+T+ E+ +HPW   N
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPWIKAN 267

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 133 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 190 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 242
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 132 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 189 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 241
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 242 SRLLKHNPSQRPMLREVLEHPWITAN 267

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 128 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 154 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRMHD 210
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V      R L+
Sbjct: 211 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDLI 263
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 131 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 188 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 240
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 128 KVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQDTYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 129 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRDTLCGTLDYLPPEMIEGRMHD 185
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 186 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 238
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 131 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 188 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 240
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I HRDLK EN LLD      +K+ DFG+S       + +S  GTP+Y+APE++     
Sbjct: 143 LNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMN 200
Query: 61  D-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRV 113
           D     GK  D+WS GV +Y +L G+ PF      R     ++ I+S +Y    P +   
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH----RKQMLMLRMIMSGNYQFGSPEWDDY 256
Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           S   + L+SR  V  P+KR T  E   HP+F
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE +  + +D
Sbjct: 133 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEXIEGRXHD 189
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 190 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 242
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWITAN 268

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 128 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 133 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLXGTLDYLPPEMIEGRMHD 189
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 190 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 242
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 125 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 181
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 182 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 234
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 235 SRLLKHNPSQRPMLREVLEHPWITAN 260

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S      S+  +  GT  Y+ PE++  + +D
Sbjct: 129 RVIHRDIKPENLLL-GS-AGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 186 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 238
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LL   +   L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 62  G--KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPG-YVRVSLEC 117
           G  +  D WS GV L++ L G  PF +     + K    +I S  Y+ IP  +  VS + 
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 251
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKG----DENDQSQSIE 173
             L+ ++ V DP+ R T  E  +HPW           +DE   +K      E ++S ++ 
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWL----------QDEDMKRKFQDLLSEENESTALP 301
Query: 174 EILGIIQEARK-PGEGPKFGGQ 194
           ++L     +RK P EG   G +
Sbjct: 302 QVLAQPSTSRKRPREGEAEGAE 323

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 127 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 183
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 184 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 236
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 237 SRLLKHNPSQRPMLREVLEHPWITAN 262

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 2   QICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRD+K EN L     K   LK+ DFG++K +  ++  ++   TP Y+APEVL  ++Y
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPEKY 206
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECR 118
           D K  D+WS GV +Y++L G  PF             +RI    Y  P   +  VS + +
Sbjct: 207 D-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 265
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGI 178
            L+  +   DP +R+TI +   HPW  +++ +         + + D++   +  EE+   
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDEVKEEMTSA 325
Query: 179 IQEAR 183
           +   R
Sbjct: 326 LATMR 330

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LL   +   L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 62  G--KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPG-YVRVSLEC 117
           G  +  D WS GV L++ L G  PF +     + K    +I S  Y+ IP  +  VS + 
Sbjct: 194 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 250
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKG----DENDQSQSIE 173
             L+ ++ V DP+ R T  E  +HPW           +DE   +K      E ++S ++ 
Sbjct: 251 LDLVKKLLVVDPKARFTTEEALRHPWL----------QDEDMKRKFQDLLSEENESTALP 300
Query: 174 EILGIIQEARK-PGEGPKFGGQ 194
           ++L     +RK P EG   G +
Sbjct: 301 QVLAQPSTSRKRPREGEAEGAE 322

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 128 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LL   +   L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 62  G--KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPG-YVRVSLEC 117
           G  +  D WS GV L++ L G  PF +     + K    +I S  Y+ IP  +  VS + 
Sbjct: 201 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 257
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKG----DENDQSQSIE 173
             L+ ++ V DP+ R T  E  +HPW           +DE   +K      E ++S ++ 
Sbjct: 258 LDLVKKLLVVDPKARFTTEEALRHPWL----------QDEDMKRKFQDLLSEENESTALP 307
Query: 174 EILGIIQEARK-PGEGPKFGGQ 194
           ++L     +RK P EG   G +
Sbjct: 308 QVLAQPSTSRKRPREGEAEGAE 329

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 2   QICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRD+K EN L     K   LK+ DFG++K +  ++  ++   TP Y+APEVL  ++Y
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPEKY 187
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECR 118
           D K  D+WS GV +Y++L G  PF             +RI    Y  P   +  VS + +
Sbjct: 188 D-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 246
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGI 178
            L+  +   DP +R+TI +   HPW  +++ +         + + D++   +  EE+   
Sbjct: 247 QLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDEVKEEMTSA 306
Query: 179 IQEAR 183
           +   R
Sbjct: 307 LATMR 311

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 133 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHD 189
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 190 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 242
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL    A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 131 RVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRMHD 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 188 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 240
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 128 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 128 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTELCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 129 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 186 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 238
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 130 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMHD 186
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 187 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 239
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 128 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTXLCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 131 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMHD 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 188 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 240
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 97/201 (48%), Gaps = 23/201 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LL   +   L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 62  G--KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPG-YVRVSLEC 117
           G  +  D WS GV L++ L G  PF +     + K    +I S  Y+ IP  +  VS + 
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 251
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKG----DENDQSQSIE 173
             L+ ++ V DP+ R T  E  +HPW           +DE   +K      E ++S ++ 
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWL----------QDEDMKRKFQDLLSEENESTALP 301
Query: 174 EILGIIQEARK-PGEGPKFGG 193
           ++L     +RK P EG   G 
Sbjct: 302 QVLAQPSTSRKRPREGEAEGA 322

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 22/150 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLSRKE 59
           I +RDLK EN LLD  K   +KI DFG++K       P  T    GTP YIAPEV+S K 
Sbjct: 127 IIYRDLKPENILLD--KNGHIKITDFGFAKYV-----PDVTYXLCGTPDYIAPEVVSTKP 179
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+  I D WS G+ +Y ML G  PF D     N   T ++IL+     P +   + + + 
Sbjct: 180 YNKSI-DWWSFGILIYEMLAGYTPFYD----SNTMKTYEKILNAELRFPPF--FNEDVKD 232
Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LLSR+   D  +R+        +++ HPWF
Sbjct: 233 LLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI DFG+S  +   S+     GT  Y+ PE++  + +D
Sbjct: 128 RVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMHD 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 185 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 237
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++     
Sbjct: 130 LNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 187
Query: 61  D-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRV 113
           D     GK  D+WS GV +Y +L G+ PF      R     ++ I+S +Y    P +   
Sbjct: 188 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH----RKQMLMLRMIMSGNYQFGSPEWDDY 243
Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           S   + L+SR  V  P+KR T  E   HP+F
Sbjct: 244 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI +FG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 130 RVIHRDIKPENLLL-GS-AGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 186
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 187 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 239
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRD+K EN LL GS A  LKI +FG+S  +   S+  +  GT  Y+ PE++  + +D
Sbjct: 131 RVIHRDIKPENLLL-GS-AGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            K+ D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L+
Sbjct: 188 EKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARDLI 240
Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
           SR+   +P +R  + E+ +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++     
Sbjct: 143 LNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 200
Query: 61  D-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRV 113
           D     GK  D+WS GV +Y +L G+ PF      R     ++ I+S +Y    P +   
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH----RKQMLMLRMIMSGNYQFGSPEWDDY 256
Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           S   + L+SR  V  P+KR T  E   HP+F
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 18/173 (10%)
Query: 3   ICHRDLKLENTL-LDGSKAPR-LKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLS 56
           + HRDLK  N L +D S  P  ++ICDFG++K   L ++    + TP Y    +APEVL 
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAE-NGLLXTPCYTANFVAPEVLE 193
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFED-PEDPRNFKTTIQRILSVHYSIPG--YVRV 113
           R+ YD    D+WS GV LY  L G  PF + P+D    +  + RI S  +S+ G  +  V
Sbjct: 194 RQGYDAA-CDIWSLGVLLYTXLTGYTPFANGPDDTP--EEILARIGSGKFSLSGGYWNSV 250
Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLK--NLP-IEFMEEDEGSMQKG 163
           S   + L+S+    DP +R+T   + +HPW +    LP  +   +D   + KG
Sbjct: 251 SDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKG 303

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL-S 56
           ICHRD+K EN L   +K+  +K+ DFG SK     ++  +    +  GTP ++APEVL +
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
             E  G   D WS GV L+++L+GA PF    D       + + L   +  P Y  +S  
Sbjct: 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLC--FENPNYNVLSPL 306
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
            R LLS +   + ++R       +HPW
Sbjct: 307 ARDLLSNLLNRNVDERFDAMRALQHPW 333

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 97/202 (48%), Gaps = 23/202 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LL   +   L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 62  G--KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPG-YVRVSLEC 117
           G  +  D WS GV L++ L G  PF +     + K    +I S  Y+ IP  +  VS + 
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 251
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKG----DENDQSQSIE 173
             L+ ++ V DP+ R T  E  +HPW           +DE   +K      E ++S +  
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWL----------QDEDMKRKFQDLLSEENESTAKP 301
Query: 174 EILGIIQEARK-PGEGPKFGGQ 194
           ++L     +RK P EG   G +
Sbjct: 302 QVLAQPSTSRKRPREGEAEGAE 323

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 21/154 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVL-- 55
            I HRDLK EN LLD +   ++++ DFG+S     H +P    +   GTP Y+APE+L  
Sbjct: 220 NIVHRDLKPENILLDDNM--QIRLSDFGFS----CHLEPGEKLRELCGTPGYLAPEILKC 273
Query: 56  SRKEYD---GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY--SIPGY 110
           S  E     GK  D+W+CGV L+ +L G+ PF      R     ++ I+   Y  S P +
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH----RRQILMLRMIMEGQYQFSSPEW 329
Query: 111 VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
              S   + L+SR+   DPE R+T  +  +HP+F
Sbjct: 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 2   QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK EN LL+  SK   ++I DFG S       + K  +GT  YIAPEVL    Y
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 227
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
           D K  DVWS GV LY++L G  PF    +  N    ++++    Y+  +P + +VS   +
Sbjct: 228 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 282
Query: 119 HLLSRIFVADPEKRITIPEIQKHPW 143
            L+ ++    P  RI+  +   H W
Sbjct: 283 DLIRKMLTYVPSMRISARDALDHEW 307

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 2   QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK EN LL+  SK   ++I DFG S       + K  +GT  YIAPEVL    Y
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 228
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
           D K  DVWS GV LY++L G  PF    +  N    ++++    Y+  +P + +VS   +
Sbjct: 229 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 283
Query: 119 HLLSRIFVADPEKRITIPEIQKHPW 143
            L+ ++    P  RI+  +   H W
Sbjct: 284 DLIRKMLTYVPSMRISARDALDHEW 308

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 2   QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK EN LL+  SK   ++I DFG S       + K  +GT  YIAPEVL    Y
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 204
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
           D K  DVWS GV LY++L G  PF    +  N    ++++    Y+  +P + +VS   +
Sbjct: 205 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 259
Query: 119 HLLSRIFVADPEKRITIPEIQKHPW 143
            L+ ++    P  RI+  +   H W
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEW 284

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P  R+K+ DFG +      ++ K+  GTP ++APE+++ + 
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP 187
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I +V+Y      +   S   
Sbjct: 188 L-GLEADMWSIGVITYILLSGASPFLGETK----QETLTNISAVNYDFDEEYFSNTSELA 242
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + R+ V DP++R+TI +  +H W
Sbjct: 243 KDFIRRLLVKDPKRRMTIAQSLEHSW 268

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 15/148 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKEYD 61
           I +RDLK EN LLD  +   +K+ DFG SK S+ H +   S  GT  Y+APEV++R+ + 
Sbjct: 147 IIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            + AD WS GV ++ ML G  PF+     ++ K T+  IL     +P +  +S E + LL
Sbjct: 205 -QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQSLL 257
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
             +F  +P  R+      + EI++H +F
Sbjct: 258 RMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD  +   +K+ DFG SK S+ H +   S  GT  Y+APEV++R+ 
Sbjct: 146 LGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  + AD WS GV ++ ML G  PF+     ++ K T+  IL     +P +  +S E + 
Sbjct: 204 HT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQS 256
Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LL  +F  +P  R+      + EI++H +F
Sbjct: 257 LLRMLFKRNPANRLGAGPDGVEEIKRHSFF 286

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M I H DLK EN L     A ++KI DFG ++      + K   GTP ++APEV++  ++
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY-DF 264
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECR 118
                D+WS GV  Y++L G  PF    D      T+  IL+  + +    +  +S E +
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE----TLNNILACRWDLEDEEFQDISEEAK 320
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWF 144
             +S++ + +   RI+  E  KHPW 
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWL 346

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD  +   +K+ DFG SK S+ H +   S  GT  Y+APEV++R+ 
Sbjct: 145 LGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  + AD WS GV ++ ML G  PF+     ++ K T+  IL     +P +  +S E + 
Sbjct: 203 HT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQS 255
Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LL  +F  +P  R+      + EI++H +F
Sbjct: 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 2   QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK EN LL+  SK   ++I DFG S       + K  +GT  YIAPEVL    Y
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL-HGTY 204
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
           D K  DVWS GV LY++L G  PF    +  N    ++++    Y+  +P + +VS   +
Sbjct: 205 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 259
Query: 119 HLLSRIFVADPEKRITIPEIQKHPW 143
            L+ +     P  RI+  +   H W
Sbjct: 260 DLIRKXLTYVPSXRISARDALDHEW 284

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LL   +   L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 62  G--KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPG-YVRVSLEC 117
           G  +  D WS GV L++ L G  PF +     + K    +I S  Y+ IP  +  VS + 
Sbjct: 334 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 390
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWF 144
             L+ ++ V DP+ R T  E  +HPW 
Sbjct: 391 LDLVKKLLVVDPKARFTTEEALRHPWL 417

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 3   ICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN LL   +   L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 62  G--KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPG-YVRVSLEC 117
           G  +  D WS GV L++ L G  PF +     + K    +I S  Y+ IP  +  VS + 
Sbjct: 320 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 376
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWF 144
             L+ ++ V DP+ R T  E  +HPW 
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWL 403

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 14/149 (9%)
Query: 2   QICHRDLKLENTLLDG--SKAPRLKICDFGYS----KSSVLHSQPKSTVGTPAYIAPEVL 55
            I HRD+K EN LL    + AP +K+ DFG +    +S ++       VGTP ++APEV+
Sbjct: 150 NIIHRDVKPENVLLASKENSAP-VKLGDFGVAIQLGESGLVAG---GRVGTPHFMAPEVV 205
Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
            R+ Y GK  DVW CGV L+++L G  PF   ++ R F+  I+    ++     +  +S 
Sbjct: 206 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPR--QWSHISE 261
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             + L+ R+ + DP +RIT+ E   HPW 
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWL 290

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 2   QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK EN LL+  SK   ++I DFG S       + K  +GT  YIAPEVL    Y
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 210
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D K  DVWS GV LY++L G  PF    +    K   +   +  + +P + +VS   + L
Sbjct: 211 DEK-CDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAKDL 267
Query: 121 LSRIFVADPEKRITIPEIQKHPW 143
           + ++    P  RI+  +   H W
Sbjct: 268 IRKMLTYVPSMRISARDALDHEW 290

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 80.9 bits (198), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 1   MQICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + + HRDLK EN L   D   +P LK+ DFG +         ++ VGTP Y++P+VL  +
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSP-LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--E 198
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLE 116
              G   D WS GV +YV+L G  PF  P D       + +I    ++ P   ++ VS +
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNVSPQ 254
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNL 148
              L+ R+    P++RIT  +  +H WF K L
Sbjct: 255 AESLIRRLLTKSPKQRITSLQALEHEWFEKQL 286

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 1   MQICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + + HRDLK EN L   D   +P LK+ DFG +         ++ VGTP Y++P+VL  +
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSP-LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--E 181
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLE 116
              G   D WS GV +YV+L G  PF  P D       + +I    ++ P   ++ VS +
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNVSPQ 237
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNL 148
              L+ R+    P++RIT  +  +H WF K L
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEHEWFEKQL 269

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 2   QICHRDLKLENTLLDGSKAP-RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I HRD+K EN LL+   +   +KI DFG S       + +  +GT  YIAPEVL +K+Y
Sbjct: 166 NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL-KKKY 224
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  DVWSCGV +Y++L G  PF    D    K   +     ++    +  +S E + L
Sbjct: 225 NEK-CDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG--KYYFDFNDWKNISDEAKEL 281
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLK 146
           +  +   D  KR T  E     W  K
Sbjct: 282 IKLMLTYDYNKRCTAEEALNSRWIKK 307

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P  R+K+ DFG +      ++ K+  GTP ++APE+++ + 
Sbjct: 149 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP 208
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I +V+Y      +   S   
Sbjct: 209 L-GLEADMWSIGVITYILLSGASPFLGETK----QETLTNISAVNYDFDEEYFSNTSELA 263
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + R+ V DP++R+ I +  +H W
Sbjct: 264 KDFIRRLLVKDPKRRMXIAQSLEHSW 289

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P  R+K+ DFG +      ++ K+  GTP ++APE+++ + 
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I +V+Y      +   S   
Sbjct: 195 L-GLEADMWSIGVITYILLSGASPFLGETK----QETLTNISAVNYDFDEEYFSNTSELA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + R+ V DP++R+ I +  +H W
Sbjct: 250 KDFIRRLLVKDPKRRMXIAQSLEHSW 275

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 158 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 215
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 216 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSXECQHLIR 263
Query: 123 RIFVADPEKRITIPEIQKHPW 143
                 P  R T  EIQ HPW
Sbjct: 264 WCLALRPSDRPTFEEIQNHPW 284

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG +       + K T+ GTP YIAPEVLS+K +
Sbjct: 141 RVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 198
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++        L
Sbjct: 199 SFEV-DVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASL 251
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++   DP  R TI E+    +F
Sbjct: 252 IQKMLQTDPTARPTINELLNDEFF 275

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSXECQHLIR 236
Query: 123 RIFVADPEKRITIPEIQKHPW 143
                 P  R T  EIQ HPW
Sbjct: 237 WCLALRPSDRPTFEEIQNHPW 257

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+  +   +KI DFG +       + K T+ GTP YIAPEVLS+K +
Sbjct: 137 RVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++        L
Sbjct: 195 SFEV-DVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASL 247
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++   DP  R TI E+    +F
Sbjct: 248 IQKMLQTDPTARPTINELLNDEFF 271

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+  +   +KI DFG +       + K T+ GTP YIAPEVLS+K +
Sbjct: 137 RVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++        L
Sbjct: 195 SFEV-DVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASL 247
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++   DP  R TI E+    +F
Sbjct: 248 IQKMLQTDPTARPTINELLNDEFF 271

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSXECQHLIR 269
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 183 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 240
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 241 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSXECQHLIR 288
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 289 WCLALRPSDRPTFEEIQNHPWM 310

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSXECQHLIR 269
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSXECQHLIR 268
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSXECQHLIR 256
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWM 278

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSXECQHLIR 283
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWM 305

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 150 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSXECQHLIR 255
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWM 277

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSXECQHLIR 256
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 257 WCLALRPXDRPTFEEIQNHPWM 278

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 134 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 191
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 192 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 239
Query: 123 RIFVADPEKRITIPEIQKHPW 143
                 P  R T  EIQ HPW
Sbjct: 240 WCLALRPSDRPTFEEIQNHPW 260

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 241
Query: 123 RIFVADPEKRITIPEIQKHPW 143
                 P  R T  EIQ HPW
Sbjct: 242 WCLALRPSDRPTFEEIQNHPW 262

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSSECQHLIR 236
Query: 123 RIFVADPEKRITIPEIQKHPW 143
                 P  R T  EIQ HPW
Sbjct: 237 WCLALRPSDRPTFEEIQNHPW 257

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 135 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 240
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWM 262

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 236
Query: 123 RIFVADPEKRITIPEIQKHPW 143
                 P  R T  EIQ HPW
Sbjct: 237 WCLALRPSDRPTFEEIQNHPW 257

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 241
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWM 263

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 241
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWM 263

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 135 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 240
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWM 262

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 283
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWM 305

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSSECQHLIR 268
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 170 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 227
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 228 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 275
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWM 297

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSSECQHLIR 268
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSSECQHLIR 269
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ------------RVSSECQHLIR 269
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 256
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWM 278

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 150 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 255
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWM 277

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 283
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWM 305

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+D ++   LK+ DFG S + +  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           + A VWS G+ LY M+ G  PFE  E+    +   ++            RVS EC+HL+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------------RVSSECQHLIR 268
Query: 123 RIFVADPEKRITIPEIQKHPWF 144
                 P  R T  EIQ HPW 
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG +       + K T+ GTP YIAPEVL +K +
Sbjct: 162 RVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ D+WS G  LY +LVG  PFE        K T  RI    YS+P ++        L
Sbjct: 220 SFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA--L 272
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + R+  ADP  R ++ E+    +F
Sbjct: 273 IRRMLHADPTLRPSVAELLTDEFF 296

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG +       + K  + GTP YIAPEVLS+K +
Sbjct: 161 RVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 218
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++        L
Sbjct: 219 SFEV-DVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASL 271
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++   DP  R TI E+    +F
Sbjct: 272 IQKMLQTDPTARPTINELLNDEFF 295

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG +       + K  + GTP YIAPEVLS+K +
Sbjct: 159 RVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++        L
Sbjct: 217 SFEV-DVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASL 269
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++   DP  R TI E+    +F
Sbjct: 270 IQKMLQTDPTARPTINELLNDEFF 293

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+  +   +KI DFG +       + K  + GTP YIAPEVLS+K +
Sbjct: 135 RVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++        L
Sbjct: 193 SFEV-DVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASL 245
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++   DP  R TI E+    +F
Sbjct: 246 IQKMLQTDPTARPTINELLNDEFF 269

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD  +   +K+ DFG SK ++ H +   S  GT  Y+APEV++R+ 
Sbjct: 149 LGIIYRDLKPENILLD--EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +    AD WS GV ++ ML G+ PF+     ++ K T+  IL     +P +  +S E + 
Sbjct: 207 HSHS-ADWWSYGVLMFEMLTGSLPFQG----KDRKETMTLILKAKLGMPQF--LSTEAQS 259
Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LL  +F  +P  R+        EI++H ++
Sbjct: 260 LLRALFKRNPANRLGSGPDGAEEIKRHVFY 289

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K+  GTP Y+APEVL   +Y 
Sbjct: 126 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 182
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F    + IL      P    +S E + LL
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAKSLL 236
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 3   ICHRDLKLENTL-LDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN L L   +  ++ I DFG SK    +    +  GTP Y+APEVL++K Y 
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-NGIMSTACGTPGYVAPEVLAQKPY- 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRH 119
            K  D WS GV  Y++L G  PF +  + + F    ++I   +Y    P +  +S   + 
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLF----EKIKEGYYEFESPFWDDISESAKD 240
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
            +  +   DP +R T  +   HPW   N  +
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWIDGNTAL 271

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      ST  GTP YIAPE+L  ++Y 
Sbjct: 174 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY- 230
Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-----DPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           G   D W+ GV ++ M+ G  PF+     D  D        Q IL     IP    +S++
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVK 288
Query: 117 CRHLLSRIFVADPEKRI------TIPEIQKHPWFLKNLPIEFMEEDE 157
              +L      DP++R+         +IQ HP+F +N+  + ME+ +
Sbjct: 289 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMMEQKQ 334

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K+  GTP Y+APEVL   +Y 
Sbjct: 129 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 185
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F+     IL      P    +S E + LL
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPR--TLSPEAKSLL 239
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 240 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 268

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P   +K+ DFG +       + K+  GTP ++APE+++ + 
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF    D +  + T+  I SV Y      +   S   
Sbjct: 195 L-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITSVSYDFDEEFFSHTSELA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + ++ V +  KR+TI E  +HPW
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K+  GTP Y+APEVL   +Y 
Sbjct: 126 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 182
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F+     IL      P    +S E + LL
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPR--TLSPEAKSLL 236
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K   GTP Y+APEVL   +Y 
Sbjct: 126 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 182
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F+     IL      P    +S E + LL
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPR--TLSPEAKSLL 236
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEY 60
           + HRDLK EN L  D +    +KI DFG+++     +QP K+   T  Y APE+L++  Y
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ---RILSVHYSIPG--YVRVSL 115
           D +  D+WS GV LY ML G  PF+  +      + ++   +I    +S  G  +  VS 
Sbjct: 187 D-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQ 245
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           E + L+  +   DP KR+ +  ++ + W 
Sbjct: 246 EAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K   GTP Y+APEVL   +Y 
Sbjct: 131 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F+     IL      P    +S E + LL
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPR--TLSPEAKSLL 241
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 242 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 270

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 76.6 bits (187), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P   +K+ DFG +       + K+  GTP ++APE+++ + 
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I SV Y      +   S   
Sbjct: 195 L-GLEADMWSIGVITYILLSGASPFLGDTK----QETLANITSVSYDFDEEFFSHTSELA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + ++ V +  KR+TI E  +HPW
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P   +K+ DFG +       + K+  GTP ++APE+++ + 
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I SV Y      +   S   
Sbjct: 195 L-GLEADMWSIGVITYILLSGASPFLGDTK----QETLANITSVSYDFDEEFFSHTSELA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + ++ V +  KR+TI E  +HPW
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K   GTP Y+APEVL   +Y 
Sbjct: 126 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 182
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F+     IL      P    +S E + LL
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPR--TLSPEAKSLL 236
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +   +  K   GTP Y+APEVL   +Y 
Sbjct: 126 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 182
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF + +  R F+     IL      P    +S E + LL
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPR--TLSPEAKSLL 236
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWFL 145
           + +   DP++R+        E+ +H +FL
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG  +K      + K   GTP YIAPEVL +K +
Sbjct: 146 RVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ D+WS G  LY +LVG  PFE        K T  RI    YS+P ++        L
Sbjct: 204 SFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA--L 256
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + R+  ADP  R ++ E+    +F
Sbjct: 257 IRRMLHADPTLRPSVAELLTDEFF 280

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG +       + K  + GTP YIAPEVL +K +
Sbjct: 162 RVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ D+WS G  LY +LVG  PFE        K T  RI    YS+P ++        L
Sbjct: 220 SFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA--L 272
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + R+  ADP  R ++ E+    +F
Sbjct: 273 IRRMLHADPTLRPSVAELLTDEFF 296

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG  +K      + K   GTP YIAPEVL +K +
Sbjct: 162 RVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             ++ D+WS G  LY +LVG  PFE        K T  RI    YS+P ++        L
Sbjct: 220 SFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA--L 272
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + R+  ADP  R ++ E+    +F
Sbjct: 273 IRRMLHADPTLRPSVAELLTDEFF 296

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P   +K+ DFG +       + K+  GTP ++APE+++ + 
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I +V Y      + + S   
Sbjct: 195 L-GLEADMWSIGVITYILLSGASPFLGDTK----QETLANITAVSYDFDEEFFSQTSELA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + ++ V +  KR+TI E  +HPW
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P   +K+ DFG +       + K+  GTP ++APE+++ + 
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I +V Y      + + S   
Sbjct: 195 L-GLEADMWSIGVITYILLSGASPFLGDTK----QETLANITAVSYDFDEEFFSQTSELA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + ++ V +  KR+TI E  +HPW
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEY 60
            + +RDLKLEN +LD  K   +KI DFG  K  +   +  K+  GTP Y+APEVL   +Y
Sbjct: 272 NVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+  D W  GV +Y M+ G  PF + +  + F    + IL      P    +  E + L
Sbjct: 330 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKSL 382
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LS +   DP++R+        EI +H +F
Sbjct: 383 LSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLK EN +L+      +K+ DFG  K S+       T  GT  Y+APE+L R  ++
Sbjct: 142 IIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHN 199
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            +  D WS G  +Y ML GA PF       N K TI +IL    ++P Y  ++ E R LL
Sbjct: 200 -RAVDWWSLGALMYDMLTGAPPFTG----ENRKKTIDKILKCKLNLPPY--LTQEARDLL 252
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
            ++   +   R+        E+Q HP+F
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEY 60
            + +RDLKLEN +LD  K   +KI DFG  K  +   +  K+  GTP Y+APEVL   +Y
Sbjct: 269 NVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+  D W  GV +Y M+ G  PF + +  + F    + IL      P    +  E + L
Sbjct: 327 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKSL 379
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LS +   DP++R+        EI +H +F
Sbjct: 380 LSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKE 59
           + I +RDLK EN LLD      + + DFG  K ++ H+   ST  GTP Y+APEVL ++ 
Sbjct: 158 LNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           YD +  D W  G  LY ML G  PF        +   + + L +  +I          RH
Sbjct: 216 YD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITN------SARH 268
Query: 120 LLSRIFVADPEKRI----TIPEIQKHPWF 144
           LL  +   D  KR+       EI+ H +F
Sbjct: 269 LLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           +I H DLK EN +L     P   +K+ DFG +       + K+  GTP ++APE+++  E
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN-YE 193
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
             G  AD+WS GV  Y++L GA PF         + T+  I +V Y      + + S   
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTK----QETLANITAVSYDFDEEFFSQTSELA 249
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + ++ V +  KR+TI E  +HPW
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK 63
            H DLK EN +    ++  LK+ DFG +         K T GT  + APEV   K   G 
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV-GY 335
Query: 64  IADVWSCGVTLYVMLVGAYPF---EDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             D+WS GV  Y++L G  PF    D E  RN K+    +    +S      +S + +  
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS-----GISEDGKDF 390
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++ +ADP  R+TI +  +HPW 
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWL 414

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEY 60
            + +RDLKLEN +LD  K   +KI DFG  K  +   +  K   GTP Y+APEVL   +Y
Sbjct: 129 NVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+  D W  GV +Y M+ G  PF + +  + F    + IL      P    +  E + L
Sbjct: 187 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKSL 239
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LS +   DP++R+        EI +H +F
Sbjct: 240 LSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEY 60
            + +RDLKLEN +LD  K   +KI DFG  K  +   +  K   GTP Y+APEVL   +Y
Sbjct: 130 NVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+  D W  GV +Y M+ G  PF + +  + F    + IL      P    +  E + L
Sbjct: 188 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKSL 240
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LS +   DP++R+        EI +H +F
Sbjct: 241 LSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEY 60
            + +RDLKLEN +LD  K   +KI DFG  K  +   +  K   GTP Y+APEVL   +Y
Sbjct: 131 NVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+  D W  GV +Y M+ G  PF + +  + F    + IL      P    +  E + L
Sbjct: 189 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKSL 241
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LS +   DP++R+        EI +H +F
Sbjct: 242 LSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      S   GTP YIAPE+L  ++Y 
Sbjct: 142 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY- 198
Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-----DPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           G   D W+ GV ++ M+ G  PF+     D  D        Q IL     IP    +S++
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SMSVK 256
Query: 117 CRHLLSRIFVADPEKRI------TIPEIQKHPWFLKNLPIEFMEEDE 157
              +L      DP++R+         +IQ HP+F +N+  + ME+ +
Sbjct: 257 AASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF-RNVDWDMMEQKQ 302

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK 63
            H DLK EN +    ++  LK+ DFG +         K T GT  + APEV   K   G 
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV-GY 229
Query: 64  IADVWSCGVTLYVMLVGAYPF---EDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             D+WS GV  Y++L G  PF    D E  RN K+    +    +S      +S + +  
Sbjct: 230 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS-----GISEDGKDF 284
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           + ++ +ADP  R+TI +  +HPW 
Sbjct: 285 IRKLLLADPNTRMTIHQALEHPWL 308

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      S   GTP YIAPE+L  ++Y 
Sbjct: 127 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY- 183
Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-----DPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           G   D W+ GV ++ M+ G  PF+     D  D        Q IL     IP    +S++
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVK 241
Query: 117 CRHLLSRIFVADPEKRI------TIPEIQKHPWFLKNLPIEFMEEDE 157
              +L      DP++R+         +IQ HP+F +N+  + ME+ +
Sbjct: 242 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMMEQKQ 287

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      S   GTP YIAPE+L  ++Y 
Sbjct: 131 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY- 187
Query: 62  GKIADVWSCGVTLYVMLVGAYPFE-----DPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           G   D W+ GV ++ M+ G  PF+     D  D        Q IL     IP    +S++
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVK 245
Query: 117 CRHLLSRIFVADPEKRI------TIPEIQKHPWFLKNLPIEFMEEDE 157
              +L      DP++R+         +IQ HP+F +N+  + ME+ +
Sbjct: 246 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMMEQKQ 291

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLK EN +L+      +K+ DFG  K S+          GT  Y+APE+L R  ++
Sbjct: 142 IIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHN 199
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            +  D WS G  +Y ML GA PF       N K TI +IL    ++P Y  ++ E R LL
Sbjct: 200 -RAVDWWSLGALMYDMLTGAPPFTG----ENRKKTIDKILKCKLNLPPY--LTQEARDLL 252
Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
            ++   +   R+        E+Q HP+F
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 16/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRK 58
           ++ HRD+K EN L+ G K   LKI DFG+S    +H+   + +   GT  Y+ PE++  K
Sbjct: 135 KVIHRDIKPENLLM-GYKG-ELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            +D K+ D+W  GV  Y  LVG  PF+ P    +   T +RI++V    P +  +S   +
Sbjct: 189 THDEKV-DLWCAGVLCYEFLVGMPPFDSP----SHTETHRRIVNVDLKFPPF--LSDGSK 241
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            L+S++    P +R+ +  + +HPW   N
Sbjct: 242 DLISKLLRYHPPQRLPLKGVMEHPWVKAN 270

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 2   QICHRDLKLENTLLDG--SKAPRLKICDFGYS----KSSVLHSQPKSTVGTPAYIAPEVL 55
            I HRD+K    LL    + AP +K+  FG +    +S ++       VGTP ++APEV+
Sbjct: 152 NIIHRDVKPHCVLLASKENSAP-VKLGGFGVAIQLGESGLVAG---GRVGTPHFMAPEVV 207
Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
            R+ Y GK  DVW CGV L+++L G  PF   ++ R F+  I+    ++     +  +S 
Sbjct: 208 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPR--QWSHISE 263
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             + L+ R+ + DP +RIT+ E   HPW 
Sbjct: 264 SAKDLVRRMLMLDPAERITVYEALNHPWL 292

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 16/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRK 58
           ++ HRD+K EN L+ G K   LKI DFG+S    +H+   + +   GT  Y+ PE++  K
Sbjct: 134 KVIHRDIKPENLLM-GYKG-ELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            +D K+ D+W  GV  Y  LVG  PF+ P    +   T +RI++V    P +  +S   +
Sbjct: 188 THDEKV-DLWCAGVLCYEFLVGMPPFDSP----SHTETHRRIVNVDLKFPPF--LSDGSK 240
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            L+S++    P +R+ +  + +HPW   N
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPWVKAN 269

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           + HRD+K EN L+D  +    K+ DFG    ++LH +P +   GT  Y  PE +SR +Y 
Sbjct: 160 VVHRDIKDENILIDLRRG-CAKLIDFG--SGALLHDEPYTDFDGTRVYSPPEWISRHQYH 216
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
              A VWS G+ LY M+ G  PFE     R+     Q IL      P +  VS +C  L+
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPFE-----RD-----QEILEAELHFPAH--VSPDCCALI 264
Query: 122 SRIFVADPEKRITIPEIQKHPWF 144
            R     P  R ++ EI   PW 
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWM 287

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APE++SR  
Sbjct: 191 VIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ-----RILSVHYSIPGYVRVS 114
           Y G   D+WS G+ +  M+ G  P+ + E P      I+     R+ ++H       +VS
Sbjct: 247 Y-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVS 297
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              +  L R+ V DP +R T  E+ KHP+  K  P
Sbjct: 298 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 2   QICHRDLKLENTLLDG--SKAPRLKICDFGYS----KSSVLHSQPKSTVGTPAYIAPEVL 55
            I HRD+K    LL    + AP +K+  FG +    +S ++       VGTP ++APEV+
Sbjct: 150 NIIHRDVKPHCVLLASKENSAP-VKLGGFGVAIQLGESGLVAG---GRVGTPHFMAPEVV 205
Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
            R+ Y GK  DVW CGV L+++L G  PF   ++ R F+  I+    ++     +  +S 
Sbjct: 206 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPR--QWSHISE 261
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             + L+ R+ + DP +RIT+ E   HPW 
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWL 290

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K ++      K   GTP YIAPE+++ + Y 
Sbjct: 142 IIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY- 198
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PFE  ++   F++ ++   +V Y           C+ L+
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAVAICKGLM 256
Query: 122 SRIFVADPEKRITI-PE----IQKHPWF 144
           ++     P KR+   PE    I++H +F
Sbjct: 257 TK----HPGKRLGCGPEGERDIKEHAFF 280

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 2   QICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            + H+DLK EN L  D S    +KI DFG ++         +  GT  Y+APEV  R   
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR--- 200
Query: 61  DGKIA-DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS-VHYSIPGYVRVSLECR 118
           D     D+WS GV +Y +L G  PF          T+++ +     Y  P Y   ++ECR
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTG--------TSLEEVQQKATYKEPNY---AVECR 249
Query: 119 -------HLLSRIFVADPEKRITIPEIQKHPWF 144
                   LL ++   DPE+R +  ++  H WF
Sbjct: 250 PLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APE++SR  
Sbjct: 268 VIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ-----RILSVHYSIPGYVRVS 114
           Y G   D+WS G+ +  M+ G  P+ + E P      I+     R+ ++H       +VS
Sbjct: 324 Y-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVS 374
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              +  L R+ V DP +R T  E+ KHP+  K  P
Sbjct: 375 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I H D+K EN + +  KA  +KI DFG +         K T  T  + APE++ R E  G
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR-EPVG 228
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHL 120
              D+W+ GV  YV+L G  PF   +D      T+Q +    +      +  VS E +  
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSPFAGEDDLE----TLQNVKRCDWEFDEDAFSSVSPEAKDF 284
Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           +  +   +P KR+T+ +  +HPW 
Sbjct: 285 IKNLLQKEPRKRLTVHDALEHPWL 308

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K ++      K   GTP YIAPE+++ + Y 
Sbjct: 463 IIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY- 519
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PFE  ++   F++ ++  ++   S+      S E   + 
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSM------SKEAVAIC 573
Query: 122 SRIFVADPEKRITI-PE----IQKHPWF 144
             +    P KR+   PE    I++H +F
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APE++SR  
Sbjct: 148 VIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ-----RILSVHYSIPGYVRVS 114
           Y G   D+WS G+ +  M+ G  P+ + E P      I+     R+ ++H       +VS
Sbjct: 204 Y-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVS 254
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              +  L R+ V DP +R T  E+ KHP+  K  P
Sbjct: 255 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 289

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APE++SR  
Sbjct: 146 VIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ-----RILSVHYSIPGYVRVS 114
           Y G   D+WS G+ +  M+ G  P+ + E P      I+     R+ ++H       +VS
Sbjct: 202 Y-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVS 252
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              +  L R+ V DP +R T  E+ KHP+  K  P
Sbjct: 253 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 287

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           M + HRD+K +N LLD  K   LK+ DFG      ++ ++H    + VGTP YI+PEVL 
Sbjct: 193 MGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMDETGMVHCD--TAVGTPDYISPEVLK 248
Query: 57  RKE---YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
            +    Y G+  D WS GV L+ MLVG  PF       +   T  +I+    S+  P   
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY----ADSLVGTYSKIMDHKNSLCFPEDA 304
Query: 112 RVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            +S   ++L+   F+ D E R+    + EI++HP+F
Sbjct: 305 EISKHAKNLIC-AFLTDREVRLGRNGVEEIKQHPFF 339

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APE++SR  
Sbjct: 137 VIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ-----RILSVHYSIPGYVRVS 114
           Y G   D+WS G+ +  M+ G  P+ + E P      I+     R+ ++H       +VS
Sbjct: 193 Y-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVS 243
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              +  L R+ V DP +R T  E+ KHP+  K  P
Sbjct: 244 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APE++SR  
Sbjct: 141 VIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQ-----RILSVHYSIPGYVRVS 114
           Y G   D+WS G+ +  M+ G  P+ + E P      I+     R+ ++H       +VS
Sbjct: 197 Y-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVS 247
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              +  L R+ V DP +R T  E+ KHP+  K  P
Sbjct: 248 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 282

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 15/148 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K  ++     +   GTP YIAPE+++ + Y 
Sbjct: 141 IIYRDLKLDNVMLDSEG--HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY- 197
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PF+  ++   F++ ++  +S   S+     VS+ C+ L+
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA-VSI-CKGLM 255
Query: 122 SRIFVADPEKRITI-PE----IQKHPWF 144
           ++     P KR+   PE    +++H +F
Sbjct: 256 TK----HPAKRLGCGPEGERDVREHAFF 279

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 26/173 (15%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLH------SQPKSTV--GTPAYIAPE 53
           I HRDLK EN L +   K   +KICDF       L+      + P+ T   G+  Y+APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 54  VL----SRKEYDGKIADVWSCGVTLYVMLVGAYPF----------EDPEDPRNFKTTI-Q 98
           V+     +  +  K  D+WS GV LY+ML G  PF          +  E  R  +  + +
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 251
Query: 99  RILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
            I    Y  P   +  +S E + L+S++ V D ++R++  ++ +HPW     P
Sbjct: 252 SIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAP 304

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-----SQPKSTVGTPAYIAPEVLSR 57
           I H+D+K  N LL  +    LKI   G +++  LH        +++ G+PA+  PE+ + 
Sbjct: 130 IVHKDIKPGNLLL--TTGGTLKISALGVAEA--LHPFAADDTCRTSQGSPAFQPPEIANG 185
Query: 58  KE-YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
            + + G   D+WS GVTLY +  G YPFE      N     + I    Y+IPG     L 
Sbjct: 186 LDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              LL  +   +P KR +I +I++H WF K  P
Sbjct: 242 --DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 19/152 (12%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APEV+SR  
Sbjct: 162 VIHRDIKSDSILLTLDG----RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSL 217
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR----VSL 115
           Y  ++ D+WS G+ +  M+       D E P    + +Q +  +  S P  ++    VS 
Sbjct: 218 YATEV-DIWSLGIMVIEMV-------DGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSP 269
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             R  L R+ V DP++R T  E+  HP+ L+ 
Sbjct: 270 VLRDFLERMLVRDPQERATAQELLDHPFLLQT 301

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           M   HRD+K +N LLD  K+  LK+ DFG     +K  ++     + VGTP YI+PEVL 
Sbjct: 192 MGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMVRCD--TAVGTPDYISPEVLK 247
Query: 57  RKE---YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
            +    Y G+  D WS GV LY MLVG  PF       +   T  +I++   S+  P   
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----ADSLVGTYSKIMNHKNSLTFPDDN 303
Query: 112 RVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            +S E ++L+   F+ D E R+    + EI++H +F
Sbjct: 304 DISKEAKNLIC-AFLTDREVRLGRNGVEEIKRHLFF 338

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           M   HRD+K +N LLD  K+  LK+ DFG     +K  ++     + VGTP YI+PEVL 
Sbjct: 192 MGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMVRCD--TAVGTPDYISPEVLK 247
Query: 57  RKE---YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
            +    Y G+  D WS GV LY MLVG  PF       +   T  +I++   S+  P   
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----ADSLVGTYSKIMNHKNSLTFPDDN 303
Query: 112 RVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            +S E ++L+   F+ D E R+    + EI++H +F
Sbjct: 304 DISKEAKNLIC-AFLTDREVRLGRNGVEEIKRHLFF 338

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           M   HRD+K +N LLD  K+  LK+ DFG     +K  ++     + VGTP YI+PEVL 
Sbjct: 187 MGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMVRCD--TAVGTPDYISPEVLK 242
Query: 57  RKE---YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYV 111
            +    Y G+  D WS GV LY MLVG  PF       +   T  +I++   S+  P   
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----ADSLVGTYSKIMNHKNSLTFPDDN 298
Query: 112 RVSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            +S E ++L+   F+ D E R+    + EI++H +F
Sbjct: 299 DISKEAKNLIC-AFLTDREVRLGRNGVEEIKRHLFF 333

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++RK
Sbjct: 136 QVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   ++S   R
Sbjct: 192 AYGPKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFR 247
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +H  FLK
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQ-FLK 274

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 2   QICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
            I H DLK +N LL  S  P   +KI DFG S+      + +  +GTP Y+APE+L+   
Sbjct: 151 NIVHLDLKPQNILL-SSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN--- 206
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           YD      D+W+ G+  Y++L    PF   ++   +    Q  ++V YS   +  VS   
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ--VNVDYSEETFSSVSQLA 264
Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM---EEDEGSMQKGDENDQS 169
              +  + V +PEKR T      H W L+    E +   EE   S Q  D + +S
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSW-LQQWDFENLFHPEETSSSSQTQDHSVRS 318

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHS--QPKST------VGTPAYIAPE 53
           I HRDLK EN L +  ++   +KICDFG      L+    P ST       G+  Y+APE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 54  VLSRKEYDGKI----ADVWSCGVTLYVMLVGAYPF-----------EDPEDPRNFKTTIQ 98
           V+     +  I     D+WS GV LY++L G  PF                P       +
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251
Query: 99  RILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
            I    Y  P   +  +S   + L+S++ V D ++R++  ++ +HPW
Sbjct: 252 SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 32/171 (18%)
Query: 5   HRDLKLENTLL--DGSKAPRLKICDFGYSK-----SSVLHSQPKST-VGTPAYIAPEVLS 56
           HRD+K  N LL  DGS    ++I DFG S        +  ++ + T VGTP ++APEV+ 
Sbjct: 144 HRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 57  R-KEYDGKIADVWSCGVTLYVMLVGAYPFED-----------PEDPRNFKTTIQRILSVH 104
           + + YD K AD+WS G+T   +  GA P+               DP + +T +Q    + 
Sbjct: 200 QVRGYDFK-ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 258
Query: 105 YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
                  +     R ++S     DPEKR T  E+ +H +F K    EF++E
Sbjct: 259 -------KYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSR--K 58
           QI HRD+K +N L++ + +  LKI DFG SK  + ++   ++  GT  Y+APE++ +  +
Sbjct: 142 QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y GK AD+WS G T+  M  G  PF +  +P+     +  +  VH  IP    +S E +
Sbjct: 201 GY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIP--ESMSAEAK 256
Query: 119 HLLSRIFVADPEKR 132
             + + F  DP+KR
Sbjct: 257 AFILKCFEPDPDKR 270

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSR--K 58
           QI HRD+K +N L++ + +  LKI DFG SK  + ++   ++  GT  Y+APE++ +  +
Sbjct: 128 QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y GK AD+WS G T+  M  G  PF +  +P+     +  +  VH  IP    +S E +
Sbjct: 187 GY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIP--ESMSAEAK 242
Query: 119 HLLSRIFVADPEKR 132
             + + F  DP+KR
Sbjct: 243 AFILKCFEPDPDKR 256

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+    VGTP ++APEV++RK
Sbjct: 136 QVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   ++S   R
Sbjct: 192 AYGPKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFR 247
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +H  FLK
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQ-FLK 274

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+    VGTP ++APEV++RK
Sbjct: 136 QVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   ++S   R
Sbjct: 192 AYGPKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFR 247
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +H  FLK
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQ-FLK 274

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD       K+ DFG  K  + +    +T  GTP YIAPE+L    Y 
Sbjct: 145 IIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY- 201
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   D W+ GV LY ML G  PFE      N     + IL+     P ++    +   +L
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFE----AENEDDLFEAILNDEVVYPTWLHE--DATGIL 255
Query: 122 SRIFVADPEKRITI------PEIQKHPWF 144
                 +P  R+          I +HP+F
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+    VGTP ++APEV++RK
Sbjct: 137 QVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   ++S   R
Sbjct: 193 AYGPKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFR 248
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +H  FLK
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQ-FLK 275

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APEV+SR  
Sbjct: 162 VIHRDIKSDSILLTSDG----RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP 217
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV----RVSL 115
           Y G   D+WS G+ +  M+ G  P+ + E P      +Q +  +  S+P  V    +VS 
Sbjct: 218 Y-GTEVDIWSLGIMVIEMIDGEPPYFN-EPP------LQAMRRIRDSLPPRVKDLHKVSS 269
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
             R  L  + V +P +R T  E+  HP FLK
Sbjct: 270 VLRGFLDLMLVREPSQRATAQELLGHP-FLK 299

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-----STVGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K     S VGT  Y++PE+L+ 
Sbjct: 153 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 209 KS-ASKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 261
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRK 58
           Q+ HR++K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++RK
Sbjct: 137 QVIHRNIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 192
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K+ D+WS G+    M+ G  P+ + E+P      I    +     P   ++S   R
Sbjct: 193 AYGPKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFR 248
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
             L+R    D EKR +  E+ +H  FLK
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQ-FLK 275

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 25/179 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE-Y 60
            ICHRD+K  N L+D  K  R+K+ DFG S+  V   + K + GT  ++ PE  S +  Y
Sbjct: 172 NICHRDVKPSNILMD--KNGRVKLSDFGESEYMV-DKKIKGSRGTYEFMPPEFFSNESSY 228
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFE---------DPEDPRNFKTTIQRILSVHYSIPGYV 111
           +G   D+WS G+ LYVM     PF          +    +N +  + R    H+  P   
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR---NHFLYPLTN 285
Query: 112 RVSLECRHLLS-------RIFV-ADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQK 162
           + S    + LS       ++F+  +P +RIT  +  KH W L +  IE + E    + K
Sbjct: 286 KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW-LADTNIEDLREFSKELYK 343

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 1   MQICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN LL  SK P   LK+ DFG++K +                     + +
Sbjct: 136 INIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKET---------------------TGE 173
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSL 115
           +YD K  D+WS GV +Y++L G  PF            KT I R+    +  P +  VS 
Sbjct: 174 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSE 231
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI 150
           E + L+  +   +P +R+TI E   HPW +++  +
Sbjct: 232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 266

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 14/155 (9%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
           + I +RD+KLEN LLD +    + + DFG SK  V     ++    GT  Y+AP+++   
Sbjct: 178 LGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235
Query: 59  EY-DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLE 116
           +    K  D WS GV +Y +L GA PF    +  +     +RIL    S P Y + +S  
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK---SEPPYPQEMSAL 292
Query: 117 CRHLLSRIFVADPEKRI-----TIPEIQKHPWFLK 146
            + L+ R+ + DP+KR+        EI++H +F K
Sbjct: 293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L  +EY
Sbjct: 309 NIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D  + D ++ GVTLY M+    PF    +    K   QR+L    + P   + S   +  
Sbjct: 367 DFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDF 423
Query: 121 LSRIFVADPEKRITIPE-----IQKHPWF 144
              +   DPEKR+   +     ++ HP F
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L  +EY
Sbjct: 309 NIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D  + D ++ GVTLY M+    PF    +    K   QR+L    + P   + S   +  
Sbjct: 367 DFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDF 423
Query: 121 LSRIFVADPEKRITIPE-----IQKHPWF 144
              +   DPEKR+   +     ++ HP F
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L  +EY
Sbjct: 309 NIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D  + D ++ GVTLY M+    PF    +    K   QR+L    + P   + S   +  
Sbjct: 367 DFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDF 423
Query: 121 LSRIFVADPEKRITIPE-----IQKHPWF 144
              +   DPEKR+   +     ++ HP F
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L  +EY
Sbjct: 309 NIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D  + D ++ GVTLY M+    PF    +    K   QR+L    + P   + S   +  
Sbjct: 367 DFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDF 423
Query: 121 LSRIFVADPEKRITIPE-----IQKHPWF 144
              +   DPEKR+   +     ++ HP F
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRK 58
           ++ HRD+K EN LL       LKI DFG+S    +H+   + K+  GT  Y+ PE++  +
Sbjct: 143 KVIHRDIKPENLLLGLKGE--LKIADFGWS----VHAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            ++ K+ D+W  GV  Y +LVG  PFE      +   T +RI+ V    P  V      +
Sbjct: 197 MHNEKV-DLWCIGVLCYELLVGNPPFESA----SHNETYRRIVKVDLKFPASVPTG--AQ 249
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            L+S++   +P +R+ + ++  HPW   N
Sbjct: 250 DLISKLLRHNPSERLPLAQVSAHPWVRAN 278

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-----STVGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K     S VGT  Y++PE+L+ 
Sbjct: 154 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 210 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 262
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 263 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 125 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-------SIPGYVRVS 114
            + +D+WS G++L  M VG YP   P+   + +  +     + Y        +P  V  S
Sbjct: 182 VQ-SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGV-FS 239
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
           LE +  +++  + +P +R  + ++  H +  ++
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS---SVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK EN LL+  +   ++I DFG +K        ++  S VGT  Y++PE+L+ K 
Sbjct: 150 IIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
              K +D+W+ G  +Y ++ G  PF    +   F    Q+I+ + Y  P   +   + R 
Sbjct: 208 -ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF----QKIIKLEYDFPE--KFFPKARD 260
Query: 120 LLSRIFVADPEKRITIPE------IQKHPWF 144
           L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   E  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADEPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 26/167 (15%)
Query: 3   ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHS--QPKST------VGTPAYIAPE 53
           I HRDLK EN L +  ++   +KICDF       L+    P ST       G+  Y+APE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 54  VLSRKEYDGKI----ADVWSCGVTLYVMLVGAYPF-----------EDPEDPRNFKTTIQ 98
           V+     +  I     D+WS GV LY++L G  PF                P       +
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251
Query: 99  RILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
            I    Y  P   +  +S   + L+S++ V D ++R++  ++ +HPW
Sbjct: 252 SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
            I H D++ EN +    ++  +KI +FG ++        +     P Y APEV  + +  
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVV 180
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRH 119
               D+WS G  +YV+L G  PF    + +     I+ I++  Y+     +  +S+E   
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQ----IIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 120 LLSRIFVADPEKRITIPEIQKHPWF 144
            + R+ V + + R+T  E  +HPW 
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWL 261

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 153 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 209 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 261
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 158 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 214 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 266
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 267 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 299

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 151 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 207 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 259
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 154 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 210 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 262
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 263 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 153 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 209 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 261
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 151 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 207 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 259
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 153 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 209 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 261
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 151 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 207 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 259
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 151 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 207 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 259
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +  +  GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 150 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF    +   F    Q+I+ + Y  P   +   + 
Sbjct: 206 KS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF----QKIIKLEYDFPE--KFFPKA 258
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 259 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 156 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P       + 
Sbjct: 212 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPA--AFFPKA 264
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 265 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 297

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 13/150 (8%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRK 58
           +I HRD+K +N  L  +K   +++ DFG ++  VL+S     ++ +GTP Y++PE+   K
Sbjct: 145 KILHRDIKSQNIFL--TKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSPEICENK 200
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y+ K +D+W+ G  LY +    + FE      + K  + +I+S  +  P  +  S + R
Sbjct: 201 PYNNK-SDIWALGCVLYELCTLKHAFE----AGSMKNLVLKIISGSFP-PVSLHYSYDLR 254
Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNL 148
            L+S++F  +P  R ++  I +  +  K +
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLXGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +K+ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +     +  GTP Y+APE++  K Y
Sbjct: 181 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGATWTLCGTPEYLAPEIILSKGY 236
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 289
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 129 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 185 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 237
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 238 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYQMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 135 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 191 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 243
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 244 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 276

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 128 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 184 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 236
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 237 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 269

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 181 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 289
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 130 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 186 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 238
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 239 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 271

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +  +  GTP Y+APE++  K Y
Sbjct: 146 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 202 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 254
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 255 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 283

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+      ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 131 IIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 187 KS-ACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLEYDFPE--KFFPKA 239
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 240 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 272

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 181 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 289
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLPNGVNDIKNHKWF 297

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 155 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 210
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 211 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 263
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 264 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+  + Y 
Sbjct: 306 RIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLECRH 119
               D W+ G  LY M+ G  PF+     R  K   + +  +   +P     R S + R 
Sbjct: 364 FS-PDWWALGCLLYEMIAGQSPFQQ----RKKKIKREEVERLVKEVPEEYSERFSPQARS 418
Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWFLK 146
           L S++   DP +R+     +  E+++HP F K
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 153 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 209 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 261
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 262 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+  + Y 
Sbjct: 306 RIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLECRH 119
               D W+ G  LY M+ G  PF+     R  K   + +  +   +P     R S + R 
Sbjct: 364 FS-PDWWALGCLLYEMIAGQSPFQQ----RKKKIKREEVERLVKEVPEEYSERFSPQARS 418
Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWFLK 146
           L S++   DP +R+     +  E+++HP F K
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 153 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 209 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 261
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 262 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 147 LDLIYRDLKPENLLID--EQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 203 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 255
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 256 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 284

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+  +   ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 153 IIHRDLKPENILLN--EDMHIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF    +   F     +I+ + Y  P   +   + 
Sbjct: 209 KS-AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF----AKIIKLEYDFPE--KFFPKA 261
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 31/161 (19%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL----S 56
           ++I HRD+K  N LLD  ++  +K+CDFG S   V         G   Y+APE +    S
Sbjct: 145 LKIIHRDIKPSNILLD--RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPE------------DPRNFKTTIQRILSVH 104
           R+ YD + +DVWS G+TLY +  G +P+                DP     + +R  S  
Sbjct: 203 RQGYDVR-SDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS-- 259
Query: 105 YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL 145
              P ++     C          D  KR    E+ KHP+ L
Sbjct: 260 ---PSFINFVNLC-------LTKDESKRPKYKELLKHPFIL 290

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 161 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 269
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I  H WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIXNHKWF 298

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLMID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLIID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +K+ DFG +K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLMID--QQGYIKVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           QI HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y+APE L    Y 
Sbjct: 135 QIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMAPERLQGTHYS 191
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  + VG YP   P+
Sbjct: 192 VQ-SDIWSMGLSLVELAVGRYPIPPPD 217

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLSR 57
           I HRDLK EN LL+  +   ++I DFG +K  VL  + K       VGT  Y++PE+L+ 
Sbjct: 153 IIHRDLKPENILLN--EDMHIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF    +   F     +I+ + Y  P   +   + 
Sbjct: 209 KS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF----AKIIKLEYDFPE--KFFPKA 261
Query: 118 RHLLSRIFVADPEKRITIPE------IQKHPWF 144
           R L+ ++ V D  KR+   E      ++ HP+F
Sbjct: 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 32/162 (19%)
Query: 5   HRDLKLENTLL--DGSKAPRLKICDFGYSK-----SSVLHSQPKST-VGTPAYIAPEVLS 56
           HRD+K  N LL  DGS    ++I DFG S        +  ++ + T VGTP ++APEV+ 
Sbjct: 139 HRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 57  R-KEYDGKIADVWSCGVTLYVMLVGAYPFED-----------PEDPRNFKTTIQRILSVH 104
           + + YD K AD+WS G+T   +  GA P+               DP + +T +Q    + 
Sbjct: 195 QVRGYDFK-ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 253
Query: 105 YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
                  +     R ++S     DPEKR T  E+ +H +F K
Sbjct: 254 -------KYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           M+I HRD+K +N L+D +K   LKI DFG +K  S    +Q    +GT  Y +PE  ++ 
Sbjct: 130 MRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAKG 186
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPF 84
           E   +  D++S G+ LY MLVG  PF
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPF 212

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 27/152 (17%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-------SQPKSTV-------GTPA 48
           I HRDLK+EN LL  S    +K+CDFG S +++ H       +Q ++ V        TP 
Sbjct: 159 IIHRDLKVENLLL--SNQGTIKLCDFG-SATTISHYPDYSWSAQRRALVEEEITRNTTPM 215
Query: 49  YIAPEVLSRKEY--DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS 106
           Y  PE++        G+  D+W+ G  LY++    +PFED            RI++  YS
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--------LRIVNGKYS 267
Query: 107 IPGYVRVSLECRHLLSRIFVADPEKRITIPEI 138
           IP +         L+  +   +PE+R++I E+
Sbjct: 268 IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 144 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 200
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHL 120
            + +D+WS G++L  M VG YP             +  I++     +P  V  SLE +  
Sbjct: 201 VQ-SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGV-FSLEFQDF 258
Query: 121 LSRIFVADPEKRITIPEIQKHPW 143
           +++  + +P +R  + ++  H +
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAF 281

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL-----SR 57
           + HRD+K  N LLD  +  ++K+CDFG S   V       + G  AY+APE +     ++
Sbjct: 146 VIHRDVKPSNILLD--ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS----IPGYVRV 113
            +YD + ADVWS G++L  +  G +P+      +N KT  + +  V       +PG++  
Sbjct: 204 PDYDIR-ADVWSLGISLVELATGQFPY------KNCKTDFEVLTKVLQEEPPLLPGHMGF 256
Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
           S + +  +      D  KR    ++ +H +  +   +E
Sbjct: 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLE 294

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+AP ++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEK-----RITIPEIQKHPWF 144
           L  +   D  K     +  + +I+ H WF
Sbjct: 269 LRNLLQVDLTKAFGNLKNGVNDIKNHKWF 297

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN ++D  +   +++ DFG +K   +  +     GTP Y+APE++  K Y
Sbjct: 160 LDLIYRDLKPENLMID--QQGYIQVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 187 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 243
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  M VG YP   P+
Sbjct: 244 VQ-SDIWSMGLSLVEMAVGRYPIPPPD 269

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 152 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 208
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  M VG YP   P+
Sbjct: 209 VQ-SDIWSMGLSLVEMAVGRYPIPPPD 234

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 125 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  M VG YP   P+
Sbjct: 182 VQ-SDIWSMGLSLVEMAVGRYPIPPPD 207

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 125 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  M VG YP   P+
Sbjct: 182 VQ-SDIWSMGLSLVEMAVGRYPIPPPD 207

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 125 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  M VG YP   P+
Sbjct: 182 VQ-SDIWSMGLSLVEMAVGRYPIPPPD 207

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y 
Sbjct: 125 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPE 88
            + +D+WS G++L  M VG YP   P+
Sbjct: 182 VQ-SDIWSMGLSLVEMAVGRYPIPPPD 207

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +     GTP  +APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEALAPEIILSKGY 215
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K  D W+ GV +Y M  G  PF   +  + +    ++I+S     P +   S + + L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVSGKVRFPSH--FSSDLKDL 268
Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRD+K EN ++  ++   +K+ DFG +          +  GT  Y APEVL    Y G
Sbjct: 151 IIHRDIKDENIVI--AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRG 208
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              ++WS GVTLY ++    PF + E+      T++   ++H   P Y+ VS E   L+S
Sbjct: 209 PELEMWSLGVTLYTLVFEENPFCELEE------TVEA--AIH---PPYL-VSKELMSLVS 256
Query: 123 RIFVADPEKRITIPEIQKHPW 143
            +    PE+R T+ ++   PW
Sbjct: 257 GLLQPVPERRTTLEKLVTDPW 277

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Query: 1   MQICHRDLKLENTLLDGSKAPRL-------KICDFGYSKSSVLHSQPKSTVGTPAYIAPE 53
           +   HRD+K +N LLD +   RL       K+ D G  +SSV        VGTP YI+PE
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV-------AVGTPDYISPE 262
Query: 54  VLSRKEYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSI 107
           +L   E      G   D WS GV +Y ML G  PF       +   T  +I++    +  
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHEERFQF 318
Query: 108 PGYVR-VSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
           P +V  VS E + L+ R+ +   E+R+    I + +KH +F
Sbjct: 319 PSHVTDVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF 358

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Query: 1   MQICHRDLKLENTLLDGSKAPRL-------KICDFGYSKSSVLHSQPKSTVGTPAYIAPE 53
           +   HRD+K +N LLD +   RL       K+ D G  +SSV        VGTP YI+PE
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV-------AVGTPDYISPE 246
Query: 54  VLSRKEYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSI 107
           +L   E      G   D WS GV +Y ML G  PF       +   T  +I++    +  
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHEERFQF 302
Query: 108 PGYVR-VSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
           P +V  VS E + L+ R+ +   E+R+    I + +KH +F
Sbjct: 303 PSHVTDVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF 342

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV----LS 56
           + + HRD+K  N L++     ++K+CDFG S   V         G   Y+APE     L+
Sbjct: 173 LSVIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELN 230
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           +K Y  K +D+WS G+T+  + +  +P++    P  F+   Q +      +P   + S E
Sbjct: 231 QKGYSVK-SDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLPAD-KFSAE 286
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
                S+    + ++R T PE+ +HP+F
Sbjct: 287 FVDFTSQCLKKNSKERPTYPELMQHPFF 314

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 21/151 (13%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYDG 62
            HRD+K  N LL  S+   +K+ DFG +         ++T VGTP ++APEV+ +  YD 
Sbjct: 142 IHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS 199
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL------E 116
           K AD+WS G+T   +  G  P  D    R           V + IP     +L       
Sbjct: 200 K-ADIWSLGITAIELAKGEPPNSDMHPMR-----------VLFLIPKNNPPTLVGDFTKS 247
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            +  +      DP  R T  E+ KH + +KN
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFIVKN 278

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYDG 62
            HRD+K  N LL  S+   +K+ DFG +         ++T VGTP ++APEV+ +  YD 
Sbjct: 146 IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 203
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYVRVSL 115
           K AD+WS G+T   +  G  P  +          P+N   T++     +YS P       
Sbjct: 204 K-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----NYSKP------- 251
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             +  +      +P  R T  E+ KH + L+N
Sbjct: 252 -LKEFVEACLNKEPSFRPTAKELLKHKFILRN 282

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   ++       VGT +Y++PE L    Y 
Sbjct: 128 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDEMANEFVGTRSYMSPERLQGTHYS 184
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHL 120
            + +D+WS G++L  M VG Y    P  P      +  I++     +P  V  SLE +  
Sbjct: 185 VQ-SDIWSMGLSLVEMAVGRY----PRPPMAIFELLDYIVNEPPPKLPSAV-FSLEFQDF 238
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKN 147
           +++  + +P +R  + ++  H +  ++
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIKRS 265

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV----LS 56
           + + HRD+K  N L++     ++K+CDFG S   V         G   Y+APE     L+
Sbjct: 129 LSVIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELN 186
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           +K Y  K +D+WS G+T+  + +  +P++    P  F+   Q +      +P   + S E
Sbjct: 187 QKGYSVK-SDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLPAD-KFSAE 242
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
                S+    + ++R T PE+ +HP+F
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQHPFF 270

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEYD 61
            HRD+K  N LL  S+   +K+ DFG +   +  +Q K    VGTP ++APEV+ +  YD
Sbjct: 141 IHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYVRVS 114
            K AD+WS G+T   +  G  P  +          P+N   T++     +YS P      
Sbjct: 198 SK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----NYSKP------ 246
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
              +  +      +P  R T  E+ KH + L+N
Sbjct: 247 --LKEFVEACLNKEPSFRPTAKELLKHKFILRN 277

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKE 59
           + HRDLK  N  LDG +   +K+ DFG ++  +L+   S  K+ VGTP Y++PE ++R  
Sbjct: 137 VLHRDLKPANVFLDGKQ--NVKLGDFGLAR--ILNHDTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+ K +D+WS G  LY +     PF         K    +I    +    Y R S E   
Sbjct: 193 YNEK-SDIWSLGCLLYELCALMPPFTAFSQ----KELAGKIREGKFRRIPY-RYSDELNE 246
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLK 146
           +++R+       R ++ EI ++P  L+
Sbjct: 247 IITRMLNLKDYHRPSVEEILENPLILE 273

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKE 59
           + HRDLK  N  LDG +   +K+ DFG ++  +L+   S  K+ VGTP Y++PE ++R  
Sbjct: 137 VLHRDLKPANVFLDGKQ--NVKLGDFGLAR--ILNHDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+ K +D+WS G  LY +     PF         K    +I    +    Y R S E   
Sbjct: 193 YNEK-SDIWSLGCLLYELCALMPPFTAFSQ----KELAGKIREGKFRRIPY-RYSDELNE 246
Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLK 146
           +++R+       R ++ EI ++P  L+
Sbjct: 247 IITRMLNLKDYHRPSVEEILENPLILE 273

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYDG 62
            HRD+K  N LL  S+   +K+ DFG +         ++T VGTP ++APEV+ +  YD 
Sbjct: 126 IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYVRVSL 115
           K AD+WS G+T   +  G  P  +          P+N   T++     +YS P       
Sbjct: 184 K-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----NYSKP------- 231
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             +  +      +P  R T  E+ KH + L+N
Sbjct: 232 -LKEFVEACLNKEPSFRPTAKELLKHKFILRN 262

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEYD 61
            HRD+K  N LL  S+   +K+ DFG +   +  +Q K    VGTP ++APEV+ +  YD
Sbjct: 126 IHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYVRVS 114
            K AD+WS G+T   +  G  P  +          P+N   T++     +YS P      
Sbjct: 183 SK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----NYSKP------ 231
Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
              +  +      +P  R T  E+ KH + L+N
Sbjct: 232 --LKEFVEACLNKEPSFRPTAKELLKHKFILRN 262

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEY 60
           + HRDLK  N  LDG +   +K+ DFG ++  + H +   K  VGTP Y++PE ++R  Y
Sbjct: 137 VLHRDLKPANVFLDGKQ--NVKLGDFGLARI-LNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           + K +D+WS G  LY +     PF         K    +I    +    Y R S E   +
Sbjct: 194 NEK-SDIWSLGCLLYELCALMPPFTAFSQ----KELAGKIREGKFRRIPY-RYSDELNEI 247
Query: 121 LSRIFVADPEKRITIPEIQKHPWFLK 146
           ++R+       R ++ EI ++P  L+
Sbjct: 248 ITRMLNLKDYHRPSVEEILENPLILE 273

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 24/154 (15%)
Query: 2   QICHRDLKLENTL--LDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEV---- 54
           +I HRDLK  N L  L+G     +++ DFG S  ++   Q + S +GTP ++APEV    
Sbjct: 129 RIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 55  -LSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-- 111
            +    YD K AD+WS G+TL  M          E P +    ++ +L +  S P  +  
Sbjct: 185 TMKDTPYDYK-ADIWSLGITLIEM-------AQIEPPHHELNPMRVLLKIAKSDPPTLLT 236
Query: 112 --RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
             + S+E R  L      +PE R +  ++ +HP+
Sbjct: 237 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 270

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 24/154 (15%)
Query: 2   QICHRDLKLENTL--LDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEV---- 54
           +I HRDLK  N L  L+G     +++ DFG S  ++   Q + S +GTP ++APEV    
Sbjct: 137 RIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 55  -LSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-- 111
            +    YD K AD+WS G+TL  M          E P +    ++ +L +  S P  +  
Sbjct: 193 TMKDTPYDYK-ADIWSLGITLIEM-------AQIEPPHHELNPMRVLLKIAKSDPPTLLT 244
Query: 112 --RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
             + S+E R  L      +PE R +  ++ +HP+
Sbjct: 245 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 2   QICHRDLKLENTL--LDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL--- 55
           +I HRDLK  N L  LDG     +K+ DFG S  +    Q + S +GTP ++APEV+   
Sbjct: 155 KIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 56  --SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-- 111
               + YD K ADVWS G+TL  M        + E P +    ++ +L +  S P  +  
Sbjct: 211 TSKDRPYDYK-ADVWSLGITLIEM-------AEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 112 --RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
             R S   +  L +    + + R T  ++ +HP+
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HR+LK  N L+D  K   +K+CDFG S+   S+ L S  KS  GTP ++APEVL R E
Sbjct: 160 IVHRNLKSPNLLVD--KKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVL-RDE 214
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPF 84
              + +DV+S GV L+ +     P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPW 239

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K +N LLD  +   + I DF  +      +Q  +  GT  Y+APE+ S ++  
Sbjct: 135 RIIHRDMKPDNILLD--EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGA 192
Query: 62  GK--IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRV-SLECR 118
           G     D WS GVT Y +L G  P+      R+  ++ + + +   ++  Y    S E  
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYH----IRSSTSSKEIVHTFETTVVTYPSAWSQEMV 248
Query: 119 HLLSRIFVADPEKRIT-IPEIQKHPW 143
            LL ++   +P++R + + ++Q  P+
Sbjct: 249 SLLKKLLEPNPDQRFSQLSDVQNFPY 274

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 2   QICHRDLKLENTLLDGS---KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           ++ HRD+K  N  +  +   K   L +  F  SK++  HS     VGTP Y++PE +   
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS----LVGTPYYMSPERIHEN 211
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y+ K +D+WS G  LY M     PF    D  N  +  ++I    Y        S E R
Sbjct: 212 GYNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268
Query: 119 HLLSRIFVADPEKR 132
            L++     DPEKR
Sbjct: 269 QLVNMCINPDPEKR 282

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 23/151 (15%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEYD 61
            HRD+K  N LL  S+   +K+ DFG +   +  +Q K    VGTP ++APEV+ +  YD
Sbjct: 138 IHRDIKAANVLL--SEQGDVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH-- 119
            K AD+WS G+T   +  G  P  D    R           V + IP     +LE +H  
Sbjct: 195 FK-ADIWSLGITAIELAKGEPPNSDLHPMR-----------VLFLIPKNSPPTLEGQHSK 242
Query: 120 ----LLSRIFVADPEKRITIPEIQKHPWFLK 146
                +      DP  R T  E+ KH +  +
Sbjct: 243 PFKEFVEACLNKDPRFRPTAKELLKHKFITR 273

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 2   QICHRDLKLENTL--LDGSKAPRLKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL--- 55
           +I HRDLK  N L  LDG     +K+ DFG S  +    Q + S +GTP ++APEV+   
Sbjct: 155 KIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 56  --SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-- 111
               + YD K ADVWS G+TL  M        + E P +    ++ +L +  S P  +  
Sbjct: 211 TSKDRPYDYK-ADVWSLGITLIEM-------AEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 112 --RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
             R S   +  L +    + + R T  ++ +HP+
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLSRK 58
           +   HRD+K +N L+D +   RL   DFG     +     +S+V  GTP YI+PE+L   
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRL--ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 59  E----YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVR 112
           E      G   D WS GV +Y ML G  PF       +   T  +I++    +  P  V 
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHKERFQFPTQVT 307
Query: 113 -VSLECRHLLSRIFVADPEKRI---TIPEIQKHPWF 144
            VS   + L+ R+ +   E R+    I + +KHP+F
Sbjct: 308 DVSENAKDLIRRL-ICSREHRLGQNGIEDFKKHPFF 342

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           M+  HRD+K  N LL+       K+ DFG + + +   ++    +GTP ++APEV+    
Sbjct: 144 MRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRV----SL 115
           Y+  +AD+WS G+T   M  G  P+ D    R        I  +  + P   R     S 
Sbjct: 202 YNC-VADIWSLGITAIEMAEGKPPYADIHPMRA-------IFMIPTNPPPTFRKPELWSD 253
Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPW 143
                + +  V  PE+R T  ++ +HP+
Sbjct: 254 NFTDFVKQCLVKSPEQRATATQLLQHPF 281

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 2   QICHRDLKLENTL--LDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL--- 55
           +I HRDLK  N L  LDG     +K+ DFG S  +    Q +   +GTP ++APEV+   
Sbjct: 155 KIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 56  --SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-- 111
               + YD K ADVWS G+TL  M        + E P +    ++ +L +  S P  +  
Sbjct: 211 TSKDRPYDYK-ADVWSLGITLIEM-------AEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 112 --RVSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
             R S   +  L +    + + R T  ++ +HP+
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 41/181 (22%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPK-------STVGTPAYI 50
            + HRDLK  N L++ +    LK+CDFG ++    S+  +S+P          V T  Y 
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 51  APEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY----- 105
           APEV+       +  DVWSCG  L  + +   P     D R+    I  I+   +     
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 106 -------------SIPGYVRVSLECRH---------LLSRIFVADPEKRITIPEIQKHPW 143
                        S+P Y    LE            LL R+ V DP KRIT  E  +HP+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 144 F 144
Sbjct: 309 L 309

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N L+D  K   +K+CDFG S+   S  L S  K   GTP ++APEVL R E
Sbjct: 160 IVHRDLKSPNLLVD--KKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVL-RDE 214
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPF 84
              + +DV+S GV L+ +     P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPW 239

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 177 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 235
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 236 SSI-DVWSAGCVLAELLLG 253

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 41/181 (22%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKST-------VGTPAYI 50
            + HRDLK  N L++ +    LK+CDFG ++    S+  +S+P          V T  Y 
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 51  APEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY----- 105
           APEV+       +  DVWSCG  L  + +   P     D R+    I  I+   +     
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 106 -------------SIPGYVRVSLECRH---------LLSRIFVADPEKRITIPEIQKHPW 143
                        S+P Y    LE            LL R+ V DP KRIT  E  +HP+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 144 F 144
Sbjct: 309 L 309

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 155 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 213
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 214 SSI-DVWSAGCVLAELLLG 231

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 147 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 205
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 206 SSI-DVWSAGCVLAELLLG 223

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 201
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 202 SSI-DVWSAGCVLAELLLG 219

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 41/181 (22%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKST-------VGTPAYI 50
            + HRDLK  N L++ +    LK+CDFG ++    S+  +S+P          V T  Y 
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 51  APEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY----- 105
           APEV+       +  DVWSCG  L  + +   P     D R+    I  I+   +     
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 106 -------------SIPGYVRVSLECRH---------LLSRIFVADPEKRITIPEIQKHPW 143
                        S+P Y    LE            LL R+ V DP KRIT  E  +HP+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 144 F 144
Sbjct: 309 L 309

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 201
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 202 SSI-DVWSAGCVLAELLLG 219

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 155 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 213
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 214 SSI-DVWSAGCVLAELLLG 231

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 201
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 202 SSI-DVWSAGCVLAELLLG 219

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 162 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 220
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 221 SSI-DVWSAGCVLAELLLG 238

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 201
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 202 SSI-DVWSAGCVLAELLLG 219

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 151 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 209
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 210 SSI-DVWSAGCVLAELLLG 227

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 144 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 202
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 203 SSI-DVWSAGCVLAELLLG 220

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV----LS 56
           + + HRD+K  N L++     ++K CDFG S   V         G   Y APE     L+
Sbjct: 156 LSVIHRDVKPSNVLINA--LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELN 213
Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           +K Y  K +D+WS G+T   + +  +P++    P  F+   Q +      +P   + S E
Sbjct: 214 QKGYSVK-SDIWSLGITXIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLPAD-KFSAE 269
Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
                S+    + ++R T PE+ +HP+F
Sbjct: 270 FVDFTSQCLKKNSKERPTYPELXQHPFF 297

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 179 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 237
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 238 SSI-DVWSAGCVLAELLLG 255

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 171 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 229
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 230 SSI-DVWSAGCVLAELLLG 247

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 222 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 280
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 281 SSI-DVWSAGCVLAELLLG 298

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 148 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 206
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 207 SSI-DVWSAGCVLAELLLG 224

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 177 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 235
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 236 SSI-DVWSAGCVLAELLLG 253

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 201
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 202 SSI-DVWSAGCVLAELLLG 219

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 201
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 202 SSI-DVWSAGCVLAELLLG 219

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 181 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 239
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 240 SSI-DVWSAGCVLAELLLG 257

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 201
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 202 SSI-DVWSAGCVLAELLLG 219

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 35/165 (21%)
Query: 1   MQICHRDLKLENTLLDGSKAP---RLKICDFGYSKSSVL----HSQPKSTVGTPAYIAPE 53
           + I HRDLK  N L+    A    +  I DFG  K   +     S+     GT  +IAPE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 54  VLSR--KEYDGKIADVWSCG-VTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGY 110
           +LS   KE      D++S G V  YV+  G++PF           ++QR  ++       
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF---------GKSLQRQANILLGA--- 244
Query: 111 VRVSLECRH-----------LLSRIFVADPEKRITIPEIQKHPWF 144
              SL+C H           L+ ++   DP+KR +   + KHP+F
Sbjct: 245 --CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD   A  LK+CDFG +K  V      S + +  Y APE +    +Y 
Sbjct: 156 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 214
Query: 62  GKIADVWSCGVTLYVMLVG 80
             I DVWS G  L  +L+G
Sbjct: 215 SSI-DVWSAGCVLAELLLG 232

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 3   ICHRDLKLENTLL-----DGSKAPR-LKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL 55
           I HRDLK  N L+     +G  + + LKI DFG ++    H   K S  G  A++APEV+
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE--WHRTTKMSAAGAYAWMAPEVI 186
Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPF 84
            R     K +DVWS GV L+ +L G  PF
Sbjct: 187 -RASMFSKGSDVWSYGVLLWELLTGEVPF 214

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK  N LL       LKICDFG   +  + +   +  G+ A++APEV     Y  
Sbjct: 127 LIHRDLKPPNLLLVAGGT-VLKICDFG--TACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHL 120
           K  DV+S G+ L+ ++    PF++   P       + + +VH     P    +      L
Sbjct: 184 K-CDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNGTRPPLIKNLPKPIESL 237
Query: 121 LSRIFVADPEKRITIPEIQK 140
           ++R +  DP +R ++ EI K
Sbjct: 238 MTRCWSKDPSQRPSMEEIVK 257

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLSRKEY 60
           +I HRDLK +N L++   A  LK+ DFG +++  +  +  +  V T  Y AP+VL   + 
Sbjct: 139 RILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 61  DGKIADVWSCGVTLYVMLVGAYPF----EDPEDPRNFKTT-----------------IQR 99
                D+WS G     M+ G   F    +D + P+ F                     QR
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256
Query: 100 ILSVHYS------IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM 153
              V         IPG+ +  ++   LLS +   DP KRI+  +   HP+F K+L  + M
Sbjct: 257 TFQVFEKKPWSSIIPGFCQEGID---LLSNMLCFDPNKRISARDAMNHPYF-KDLDPQIM 312

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK  N LL       LKICDFG   +  + +   +  G+ A++APEV     Y  
Sbjct: 126 LIHRDLKPPNLLLVAGGT-VLKICDFG--TACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHL 120
           K  DV+S G+ L+ ++    PF++   P       + + +VH     P    +      L
Sbjct: 183 K-CDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNGTRPPLIKNLPKPIESL 236
Query: 121 LSRIFVADPEKRITIPEIQK 140
           ++R +  DP +R ++ EI K
Sbjct: 237 MTRCWSKDPSQRPSMEEIVK 256

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLSRKEY 60
           +I HRDLK +N L++   A  LK+ DFG +++  +  +  +  V T  Y AP+VL   + 
Sbjct: 139 RILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 61  DGKIADVWSCGVTLYVMLVGAYPF----EDPEDPRNFKTT-----------------IQR 99
                D+WS G     M+ G   F    +D + P+ F                     QR
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256
Query: 100 ILSVHYS------IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
              V         IPG+ +  ++   LLS +   DP KRI+  +   HP+F
Sbjct: 257 TFQVFEKKPWSSIIPGFCQEGID---LLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 3   ICHRDLKLENTLLDGSKAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 365
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRI-LSVHYSIPGYVRVSLEC 117
                 AD +S G  L+ +L G  PF   +     K  I R+ L++   +P     S E 
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--SFSPEL 421
Query: 118 RHLLSRIFVADPEKRI-----TIPEIQKHPWF 144
           R LL  +   D  +R+        E+++ P+F
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS GV +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 3   ICHRDLKLENTLLDGSKAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 364
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRI-LSVHYSIPGYVRVSLEC 117
                 AD +S G  L+ +L G  PF   +     K  I R+ L++   +P     S E 
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--SFSPEL 420
Query: 118 RHLLSRIFVADPEKRI-----TIPEIQKHPWF 144
           R LL  +   D  +R+        E+++ P+F
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS GV +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
               GY    L                  + R LLS++ V D  KRI++ E  +HP+
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 39/177 (22%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++  +      V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRI--------LSVHYSIPGYVR-- 112
            + D+WS G  +  ++ G   F+  +    +   I+++         ++  ++  YV   
Sbjct: 205 NV-DIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
Query: 113 --------------------------VSLECRHLLSRIFVADPEKRITIPEIQKHPW 143
                                      + + R LLS++ V DP+KRI++ E  +HP+
Sbjct: 264 PKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 320

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 3   ICHRDLKLENTLLDGSKAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 365
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRI-LSVHYSIPGYVRVSLEC 117
                 AD +S G  L+ +L G  PF   +     K  I R+ L++   +P     S E 
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--SFSPEL 421
Query: 118 RHLLSRIFVADPEKRI-----TIPEIQKHPWF 144
           R LL  +   D  +R+        E+++ P+F
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 3   ICHRDLKLENTLLDGSKAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 365
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRI-LSVHYSIPGYVRVSLEC 117
                 AD +S G  L+ +L G  PF   +     K  I R+ L++   +P     S E 
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--SFSPEL 421
Query: 118 RHLLSRIFVADPEKRI-----TIPEIQKHPWF 144
           R LL  +   D  +R+        E+++ P+F
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++  +      V T  Y APEV+    Y  
Sbjct: 145 IIHRDLKPSNIVVKSDCT--LKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRI--------LSVHYSIPGYVR-- 112
            + D+WS G  +  ++ G+  F+  +    +   I+++         ++  ++  YV   
Sbjct: 203 NV-DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 261
Query: 113 -----VSLE---------------------CRHLLSRIFVADPEKRITIPEIQKHPW 143
                ++ E                      R LLS++ V DP+KRI++ E  +HP+
Sbjct: 262 PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 42/176 (23%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP +T       VGT  Y+ PE 
Sbjct: 176 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH 278
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPWF-LKNLPIEFM 153
             I     +        + + +L      DP++RI+IPE+  HP+  ++  P+  M
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE- 59
           ++ HRD+K +N LL  ++   +K+ DFG S         ++T +GTP ++APEV++  E 
Sbjct: 149 KVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 206
Query: 60  ----YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNF----KTTIQRILSVHYSIPGYV 111
               YD K +D+WS G+T   M  GA P  D    R      +    R+ S  +      
Sbjct: 207 PDATYDFK-SDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW------ 259
Query: 112 RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP------IEFMEEDEGSMQKGDE 165
             S + +  +    V +  +R    ++ KHP F+++ P      I+  +  + + +K  E
Sbjct: 260 --SKKFQSFIESCLVKNHSQRPATEQLMKHP-FIRDQPNERQVRIQLKDHIDRTKKKRGE 316
Query: 166 NDQSQ 170
            D+++
Sbjct: 317 KDETE 321

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 42/176 (23%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP +T       VGT  Y+ PE 
Sbjct: 176 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH 278
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPWF-LKNLPIEFM 153
             I     +        + + +L      DP++RI+IPE+  HP+  ++  P+  M
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 47/200 (23%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP +T       VGT  Y+ PE 
Sbjct: 132 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 183
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 184 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLH 234
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEG 158
             I     +        + + +L      DP++RI+IPE+  HP+      ++       
Sbjct: 235 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY------VQIQTHPVN 288
Query: 159 SMQKGDENDQSQSIEEILGI 178
            M KG   +    + +++G+
Sbjct: 289 QMAKGTTEEMKYVLGQLVGL 308

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 47/200 (23%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP +T       VGT  Y+ PE 
Sbjct: 128 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 179
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 180 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLH 230
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEG 158
             I     +        + + +L      DP++RI+IPE+  HP+      ++       
Sbjct: 231 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY------VQIQTHPVN 284
Query: 159 SMQKGDENDQSQSIEEILGI 178
            M KG   +    + +++G+
Sbjct: 285 QMAKGTTEEMKYVLGQLVGL 304

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 47/200 (23%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP +T       VGT  Y+ PE 
Sbjct: 129 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 180
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLH 231
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEG 158
             I     +        + + +L      DP++RI+IPE+  HP+      ++       
Sbjct: 232 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY------VQIQTHPVN 285
Query: 159 SMQKGDENDQSQSIEEILGI 178
            M KG   +    + +++G+
Sbjct: 286 QMAKGTTEEMKYVLGQLVGL 305

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 42/176 (23%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP +T       VGT  Y+ PE 
Sbjct: 148 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 199
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLH 250
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPWF-LKNLPIEFM 153
             I     +        + + +L      DP++RI+IPE+  HP+  ++  P+  M
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 306

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 2   QICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK EN +L  G +    KI D GY+K           VGT  Y+APE+L +K+Y
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKY 201
Query: 61  DGKIADVWSCGVTLYVMLVGAYPF 84
              + D WS G   +  + G  PF
Sbjct: 202 TVTV-DYWSFGTLAFECITGFRPF 224

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 2   QICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK EN +L  G +    KI D GY+K           VGT  Y+APE+L +K+Y
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKY 200
Query: 61  DGKIADVWSCGVTLYVMLVGAYPF 84
              + D WS G   +  + G  PF
Sbjct: 201 TVTV-DYWSFGTLAFECITGFRPF 223

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 3   ICHRDLKLENTLL----DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR- 57
           I HR++K  N +     DG      K+ DFG ++      Q  S  GT  Y+ P++  R 
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSV--YKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 58  -------KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS 102
                  K+Y G   D+WS GVT Y    G+ PF   E PR  K  + +I++
Sbjct: 191 VLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 42/176 (23%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-------VGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP +T       VG   Y+ PE 
Sbjct: 176 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH 278
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPWF-LKNLPIEFM 153
             I     +        + + +L      DP++RI+IPE+  HP+  ++  P+  M
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 69/165 (41%), Gaps = 41/165 (24%)
Query: 3   ICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPK-------STVGTPAYIAPEV 54
           I H DLK  N L+ DG     LK+ DFG +       QP        S VGT  Y+ PE 
Sbjct: 148 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDXXXVVKDSQVGTVNYMPPEA 199
Query: 55  ---LSRKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
              +S    +GK         DVWS G  LY M  G  PF+           I +I  +H
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH 250
Query: 105 YSIPGYVRVSL------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
             I     +        + + +L      DP++RI+IPE+  HP+
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYD 61
           HRD+K  N LLD  +A   KI DFG +++S   +Q       VGT AY+APE L R E  
Sbjct: 156 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEIT 212
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPR 91
            K +D++S GV L  ++ G    ++  +P+
Sbjct: 213 PK-SDIYSFGVVLLEIITGLPAVDEHREPQ 241

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LSRK 58
            + HRD+K  N LL  S+   +K+ DFG   S+ + +     VGTP ++APEV   +   
Sbjct: 174 NMIHRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMDEG 228
Query: 59  EYDGKIADVWSCGVT 73
           +YDGK+ DVWS G+T
Sbjct: 229 QYDGKV-DVWSLGIT 242

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK EN L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 124 RVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYD 61
           HRD+K  N LLD  +A   KI DFG +++S   +Q       VGT AY+APE L R E  
Sbjct: 156 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEIT 212
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPR 91
            K +D++S GV L  ++ G    ++  +P+
Sbjct: 213 PK-SDIYSFGVVLLEIITGLPAVDEHREPQ 241

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK EN L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 125 RVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK EN L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 124 RVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 130 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK EN L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 126 RVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LSRK 58
            + HRD+K  N LL  S+   +K+ DFG   S+ + +     VGTP ++APEV   +   
Sbjct: 135 NMIHRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMDEG 189
Query: 59  EYDGKIADVWSCGVT 73
           +YDGK+ DVWS G+T
Sbjct: 190 QYDGKV-DVWSLGIT 203

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK EN L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRD+K  N L+  + A  +K+ DFG ++    S     Q  + +GT  Y++PE     
Sbjct: 137 IIHRDVKPANILISATNA--VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPF 84
             D + +DV+S G  LY +L G  PF
Sbjct: 195 SVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYD 61
           HRD+K  N LLD  +A   KI DFG +++S   +Q       VGT AY+APE L R E  
Sbjct: 150 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEIT 206
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPR 91
            K +D++S GV L  ++ G    ++  +P+
Sbjct: 207 PK-SDIYSFGVVLLEIITGLPAVDEHREPQ 235

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 3   ICHRDLKLENTLL----DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR- 57
           I HR++K  N +     DG      K+ DFG ++      Q     GT  Y+ P++  R 
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSV--YKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERA 190
Query: 58  -------KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS 102
                  K+Y G   D+WS GVT Y    G+ PF   E PR  K  + +I++
Sbjct: 191 VLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRD+K  N ++  + A  +K+ DFG ++    S    +Q  + +GT  Y++PE     
Sbjct: 137 IIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPF 84
             D + +DV+S G  LY +L G  PF
Sbjct: 195 SVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRD+K  N ++  + A  +K+ DFG ++    S    +Q  + +GT  Y++PE     
Sbjct: 137 IIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPF 84
             D + +DV+S G  LY +L G  PF
Sbjct: 195 SVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRD+K  N ++  + A  +K+ DFG ++    S    +Q  + +GT  Y++PE     
Sbjct: 137 IIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPF 84
             D + +DV+S G  LY +L G  PF
Sbjct: 195 SVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRD+K  N ++  + A  +K+ DFG ++    S    +Q  + +GT  Y++PE     
Sbjct: 137 IIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPF 84
             D + +DV+S G  LY +L G  PF
Sbjct: 195 SVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRD+K  N ++  + A  +K+ DFG ++    S    +Q  + +GT  Y++PE     
Sbjct: 154 IIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 211
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPF 84
             D + +DV+S G  LY +L G  PF
Sbjct: 212 SVDAR-SDVYSLGCVLYEVLTGEPPF 236

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEY 60
            I HRD+K EN L+  S++  +K+CDFG++++     +     V T  Y APE+L     
Sbjct: 144 NIIHRDIKPENILV--SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 61  DGKIADVWSCGVTLYVMLVG 80
            GK  DVW+ G  +  M +G
Sbjct: 202 YGKAVDVWAIGCLVTEMFMG 221

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 1   MQICHRDLKLENTLLD-----------GSKAPRLKICDFGYSKS-----SVLHSQPKSTV 44
           ++I HRDLK +N L+            G++  R+ I DFG  K              +  
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 45  GTPAYIAPEVL--SRKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPRNFKTTIQRIL 101
           GT  + APE+L  S K    +  D++S G   Y +L  G +PF D     +    I+ I 
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIF 269
Query: 102 SVHYSIPGYVRVSL-ECRHLLSRIFVADPEKRITIPEIQKHPWFL-KNLPIEFM 153
           S+      + R  + E   L+S++   DP KR T  ++ +HP F  K+  +EF+
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFL 323

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N L++ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 164 NVLHRDLKPSNLLINTTCD--LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 58  KEYDGKIADVWSCGVTLYVMLVG--AYPFEDPEDPRNF------------KTTIQRILSV 103
            +   K  D+WS G  L  ML     +P +   D  N                I  + + 
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKAR 281
Query: 104 HY--SIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +Y  S+P   +V+          +   LL R+   +P KRIT+ E   HP+ 
Sbjct: 282 NYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 148 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 206 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 264
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 265 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 1   MQICHRDLKLENTLLD-----------GSKAPRLKICDFGYSKS-----SVLHSQPKSTV 44
           ++I HRDLK +N L+            G++  R+ I DFG  K              +  
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 45  GTPAYIAPEVL--SRKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPRNFKTTIQRIL 101
           GT  + APE+L  S K    +  D++S G   Y +L  G +PF D     +    I+ I 
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIF 269
Query: 102 SVHYSIPGYVRVSL-ECRHLLSRIFVADPEKRITIPEIQKHPWFL-KNLPIEFM 153
           S+      + R  + E   L+S++   DP KR T  ++ +HP F  K+  +EF+
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFL 323

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV-LSRKE 59
           + ICHRD+K +N L++ SK   LK+CDFG +K  +      + + +  Y APE+ L   E
Sbjct: 160 LGICHRDIKPQNLLVN-SKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATE 218
Query: 60  YDGKIADVWSCGVTLYVMLVG 80
           Y   I D+WS G     +++G
Sbjct: 219 YTPSI-DLWSIGCVFGELILG 238

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 148 IIHRDLKPSN--LAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 262 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 130 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 152 IIHRDLKPSN--LAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 266 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLSRK 58
           Q  HRDL   N L+D      +K+ DFG ++  VL  Q  S+VGT     + APEV    
Sbjct: 124 QFIHRDLAARNCLVDRDLC--VKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYF 180
Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQ--RILSVHYSIPGYVRVSL 115
           +Y  K +DVW+ G+ ++ V  +G  P++   +        Q  R+   H +     ++  
Sbjct: 181 KYSSK-SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMY 239
Query: 116 ECRHLLSRIFVADPEKRITIPEI 138
            C H L       PEKR T  ++
Sbjct: 240 SCWHEL-------PEKRPTFQQL 255

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 126 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 125 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 126 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 125 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 126 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 124 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 126 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 124 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +   S+    V T  Y APEV+       
Sbjct: 149 IIHRDLKPGN--LAVNEDCELKILDFGLARQA--DSEMXGXVVTRWYRAPEVILNWMRYT 204
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPED--------------PRNFKTTIQRILSVHY--S 106
           +  D+WS G  +  M+ G   F+  +               P  F   +Q   + +Y   
Sbjct: 205 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG 264
Query: 107 IPG---------YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF--LKNLPIEFMEE 155
           +P              S    +LL ++ V D E+R+T  E   HP+F  L +       E
Sbjct: 265 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD------TE 318
Query: 156 DEGSMQKGDE--NDQSQSIEE 174
           DE  +QK D+  +D  ++++E
Sbjct: 319 DEPQVQKYDDSFDDVDRTLDE 339

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 122 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 127 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 31/172 (18%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +I HRDLK +N L++  K  +LK+ DFG +++  +  +   S V T  Y AP+VL     
Sbjct: 128 KILHRDLKPQNLLIN--KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFK-------TTIQRILSVHYSIPGY--- 110
                D+WSCG  L  M+ G   F    D    K       T  + +      +P Y   
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN 245
Query: 111 --------VRVSLE----------CRHLLSRIFVADPEKRITIPEIQKHPWF 144
                   +R  L+              L  +   +P+ R++  +   HPWF
Sbjct: 246 IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 149 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKE 206
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   +P  D                PE  +  + T++  +   
Sbjct: 207 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 265
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 266 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 126 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 125 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 127 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 122 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 124 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 157 IIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 271 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 122 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + +CHRD+K  N L++ +    LK+CDFG +K         + + +  Y APE++   ++
Sbjct: 150 VNVCHRDIKPHNVLVNEADGT-LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQH 208
Query: 61  DGKIADVWSCGVTLYVMLVG 80
                D+WS G     M++G
Sbjct: 209 YTTAVDIWSVGCIFAEMMLG 228

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 122 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 122 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNAMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 151 IIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 265 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 123 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           ++ HRDLK +N L++   A  +K+ DFG +++  V        V T  Y APE+L   +Y
Sbjct: 122 RVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 61  DGKIADVWSCGVTLYVMLV--GAYPFEDPEDP--RNFKTT----------IQRILSVHYS 106
                D+WS G     M+     +P +   D   R F+T           +  +     S
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P + R            + R LLS++   DP KRI+      HP+F
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYD 61
           HRD+K  N LLD  +A   KI DFG +++S   +Q       VGT AY APE L R E  
Sbjct: 147 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEIT 203
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPR 91
            K +D++S GV L  ++ G    ++  +P+
Sbjct: 204 PK-SDIYSFGVVLLEIITGLPAVDEHREPQ 232

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 151 IIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 265 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 153 IIHRDLKPSN--LAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 269 LTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 152 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 266 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 153 IIHRDLKPSN--LAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 269 LTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 175 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 228
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
                D+WS G  +  +L G   +P  D                          + RN+ 
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYI 288
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFME 154
            ++ ++   +++   ++  +     LL ++ V D +KRIT  E   HP+F +        
Sbjct: 289 NSLPQMPKRNFA-DVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHD----P 343
Query: 155 EDEGSMQKGDENDQSQS--IEEILGIIQEARKPGEGPKFGG 193
           +DE   +  D++ +S+   IEE   +  E     E P F G
Sbjct: 344 DDEPESEPYDQSFESRQLEIEEWKRLTYEEVCSFETPPFDG 384

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 157 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 271 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 1   MQICHRDLKLENTLLD-----------GSKAPRLKICDFGYSK-----SSVLHSQPKSTV 44
           ++I HRDLK +N L+            G++  R+ I DFG  K      S   +   +  
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 45  GTPAYIAPEVLSR------KEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPRNFKTTI 97
           GT  + APE+L        K    +  D++S G   Y +L  G +PF D     +    I
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NII 251
Query: 98  QRILSVHYSIPGYVRVSL-ECRHLLSRIFVADPEKRITIPEIQKHPWFL-KNLPIEFM 153
           + I S+      + R  + E   L+S++   DP KR T  ++ +HP F  K+  +EF+
Sbjct: 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFL 309

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 153 IIHRDLKPSN--LAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 269 LTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 158 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 272 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 169 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 222
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 282
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 283 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 158 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 272 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 158 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 272 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 148 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 262 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 153 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 206
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 267 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 166 IIHRDLKPSN--LAVNEDCELKILDFGLARHT--DDEMXGXVATRWYRAPEIMLNWMHYN 221
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 282 LAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 166 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 280 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPE 53
           +I H D+K +N LL  DGS+A    +CDFG++         KS +      GT  ++APE
Sbjct: 170 RILHGDVKADNVLLSSDGSRA---ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVGAYPF 84
           V+  K  D K+ D+WS    +  ML G +P+
Sbjct: 227 VVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 256

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 39/172 (22%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK  N  L  ++   LKI DFG ++ +   ++    V T  Y APEV+    +  
Sbjct: 165 VVHRDLKPGN--LAVNEDCELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILSWMHYN 220
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG------------- 109
           +  D+WS G  +  ML G   F+     +++   + +IL V   +PG             
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKVT-GVPGTEFVQKLNDKAAK 275
Query: 110 -----------------YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                            + R S +   LL ++   D +KR+T  +   HP+F
Sbjct: 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 165 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 279 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 165 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 279 QSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPE 53
           +I H D+K +N LL  DGS+A    +CDFG++         KS +      GT  ++APE
Sbjct: 184 RILHGDVKADNVLLSSDGSRAA---LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVGAYPF 84
           V+  K  D K+ D+WS    +  ML G +P+
Sbjct: 241 VVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 270

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 166 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 280 QSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG  +    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDSELKILDFGLCR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 151 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 265 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 145 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 198
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 199 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 258
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 259 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPE 53
           +I H D+K +N LL  DGS+A    +CDFG++         KS +      GT  ++APE
Sbjct: 186 RILHGDVKADNVLLSSDGSRA---ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVGAYPF 84
           V+  K  D K+ D+WS    +  ML G +P+
Sbjct: 243 VVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 272

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 148 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 262 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 29/171 (16%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVG----TPAYIAPEVLSR 57
            + HRDLK  N  ++ ++   LKI DFG ++    H   K  +     T  Y +P +L  
Sbjct: 140 NVLHRDLKPANLFIN-TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198
Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--------IPG 109
                K  D+W+ G     ML G   F    +    +  ++ I  VH          IP 
Sbjct: 199 PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPV 258
Query: 110 YVR----------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           Y+R                +S E    L +I    P  R+T  E   HP+ 
Sbjct: 259 YIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 151 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 265 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 148 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 262 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 156 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 209
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 210 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 269
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 270 QSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 169 IIHRDLKPSN--LAVNEDCELKILDFGLARHT--DDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 285 LTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGXVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS--TVGTPAYIAPEVLSRKEYDG 62
           HRD+K +N LLD  +   +++ DFG           +S   VGTP Y++PE+L       
Sbjct: 185 HRDIKPDNILLD--RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 63  KIA------DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSL 115
                    D W+ GV  Y M  G  PF        +   +      H S+P     V  
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH--YKEHLSLPLVDEGVPE 300
Query: 116 ECRHLLSRIFVADPEKRI---TIPEIQKHPWFL 145
           E R  + R+ +  PE R+      + + HP+F 
Sbjct: 301 EARDFIQRL-LCPPETRLGRGGAGDFRTHPFFF 332

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 144 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 197
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 198 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 257
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 258 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVG-------TPAYIAPE 53
            HRDLK  N LL     P L   D G    + +H   S+   T+        T +Y APE
Sbjct: 156 AHRDLKPTNILLGDEGQPVL--MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 54  VLSRKEY--DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV--HYSIPG 109
           + S + +    +  DVWS G  LY M+ G  P++       F+      L+V    SIP 
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD-----MVFQKGDSVALAVQNQLSIPQ 268
Query: 110 YVRVSLECRHLLSRIFVADPEKRITIP 136
             R S     LL+ +   DP +R  IP
Sbjct: 269 SPRHSSALWQLLNSMMTVDPHQRPHIP 295

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 143 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 257 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 143 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 257 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 43/174 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           + HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APEV+    +
Sbjct: 147 VVHRDLKPGN--LAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMH 200
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG----------- 109
             +  D+WS G  +  ML G   F+     +++   + +IL V   +PG           
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKVT-GVPGTEFVQKLNDKA 255
Query: 110 -------------------YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                              + R S +   LL ++   D +KR+T  +   HP+F
Sbjct: 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 152 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 266 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 142 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 256 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 152 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 266 QSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 262 LTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 142 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 256 QSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DFG ++    H+  + T  V T  Y APE++    +
Sbjct: 142 IIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 256 QSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 262 LAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  L  ++   LKI DFG ++ +    +    V T  Y APE++    +  
Sbjct: 142 IIHRDLKPSN--LAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWMHYN 197
Query: 63  KIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFKTT 96
           +  D+WS G  +  +L G   +P  D                         E  RN+  +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 97  IQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           + ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 258 LAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 261
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 262 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 261
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 262 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 140 IIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 198 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 254
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 255 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 261
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 262 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPE 53
           +I H D+K +N LL  DGS A    +CDFG++         KS +      GT  ++APE
Sbjct: 205 RILHGDVKADNVLLSSDGSHA---ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPE 261
Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVGAYPF 84
           V+  +  D K+ DVWS    +  ML G +P+
Sbjct: 262 VVLGRSCDAKV-DVWSSCCMMLHMLNGCHPW 291

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 261
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 262 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++      +  V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI D+G ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDYGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 35/175 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRD+K  N ++D  +  +L++ D+G ++      +    V +  +  PE+L   +   
Sbjct: 158 IMHRDVKPHNVMIDHQQK-KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYD 216
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR---------- 112
              D+WS G  L  M+    PF   +D  +    I ++L     + GY++          
Sbjct: 217 YSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE-ELYGYLKKYHIDLDPHF 275
Query: 113 ---------------VSLECRHLLS--------RIFVADPEKRITIPEIQKHPWF 144
                          +  E RHL+S        ++   D ++R+T  E  +HP+F
Sbjct: 276 NDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 152 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 209
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 210 NV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 268
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               GY    L                  + R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 269 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 35/175 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRD+K  N ++D  +  +L++ D+G ++      +    V +  +  PE+L   +   
Sbjct: 153 IMHRDVKPHNVMIDHQQK-KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYD 211
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR---------- 112
              D+WS G  L  M+    PF   +D  +    I ++L     + GY++          
Sbjct: 212 YSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE-ELYGYLKKYHIDLDPHF 270
Query: 113 ---------------VSLECRHLLS--------RIFVADPEKRITIPEIQKHPWF 144
                          +  E RHL+S        ++   D ++R+T  E  +HP+F
Sbjct: 271 NDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 27/178 (15%)
Query: 1   MQICHRDLKLENTLLD-----------GSKAPRLKICDFGYSKS-----SVLHSQPKSTV 44
           ++I HRDLK +N L+            G++  R+ I DFG  K              +  
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 45  GTPAYIAPEVLSR------KEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPRNFKTTI 97
           GT  + APE+L        K    +  D++S G   Y +L  G +PF D     +    I
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NII 251
Query: 98  QRILSVHYSIPGYVRVSL-ECRHLLSRIFVADPEKRITIPEIQKHPWFL-KNLPIEFM 153
           + I S+      + R  + E   L+S++   DP KR T  ++ +HP F  K+  +EF+
Sbjct: 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFL 309

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 39/177 (22%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 141 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 199 NV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 257
Query: 105 YSIPGYVRVSL------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
               GY    L                  + R LLS++ V D  KRI++ E  +HP+
Sbjct: 258 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 314

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++      +  V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFEDPEDPRN------------FKTTIQRILSVHY-SI 107
            + D+WS G  +  M+     +P  D  D  N            F   +Q  +  +  + 
Sbjct: 205 NV-DIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENR 263
Query: 108 PGYVRVSLE---------------------CRHLLSRIFVADPEKRITIPEIQKHPWF 144
           P Y   S E                      R LLS++ V D  KRI++ E  +HP+ 
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-------VLHSQP--------KSTVGTP 47
           I HRDLK  N  +D S+   +KI DFG +K+         L SQ          S +GT 
Sbjct: 137 IIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 48  AYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI 107
            Y+A EVL    +  +  D++S G+  + M+   YPF    +  N    + R +S+ +  
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL-RSVSIEFP- 249
Query: 108 PGYVRVSLECRHLLSRIFV-ADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
           P +    ++    + R+ +  DP KR     +    W    LP++  +E
Sbjct: 250 PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW----LPVKHQDE 294

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 148 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 206 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 262
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 263 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
Query: 144 F 144
Sbjct: 322 I 322

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 185 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 243 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 299
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 300 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358
Query: 144 F 144
Sbjct: 359 I 359

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 35/173 (20%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L++  +   LK+ DFG +++  + ++   + V T  Y  P++L    +
Sbjct: 120 KVLHRDLKPQNLLIN--ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 60  YDGKIADVWSCGVTLYVMLVG--AYPFEDPEDPRNFKTTIQRILSV-------------- 103
           Y  +I D+W  G   Y M  G   +P    E+  +F   I RIL                
Sbjct: 178 YSTQI-DMWGVGCIFYEMATGRPLFPGSTVEEQLHF---IFRILGTPTEETWPGILSNEE 233
Query: 104 --HYSIPGYV---------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL 145
              Y+ P Y          R+  +   LL+++   +   RI+  +  KHP+FL
Sbjct: 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 185 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 243 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 299
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 300 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 261
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 262 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
Query: 144 F 144
Sbjct: 321 I 321

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK +N  + G     +KI D G + +    S  K+ +GTP + APE    K YD 
Sbjct: 152 IIHRDLKCDNIFITGPTGS-VKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXYEEK-YDE 208
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL-ECRHLL 121
            + DV++ G          YP+ + ++       I R ++       + +V++ E + ++
Sbjct: 209 SV-DVYAFGXCXLEXATSEYPYSECQNA----AQIYRRVTSGVKPASFDKVAIPEVKEII 263
Query: 122 SRIFVADPEKRITIPEIQKHPWF 144
                 + ++R +I ++  H +F
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFF 286

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 148 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 206 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 262
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 263 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
Query: 144 F 144
Sbjct: 322 I 322

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 141 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 199 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 255
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 256 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 205 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 261
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 262 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
Query: 144 F 144
Sbjct: 321 I 321

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 141 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 199 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 255
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 256 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 45/180 (25%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 140 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 198 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 254
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 255 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-------VLHSQP--------KSTVGTP 47
           I HRDLK  N  +D S+   +KI DFG +K+         L SQ          S +GT 
Sbjct: 137 IIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 48  AYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI 107
            Y+A EVL    +  +  D++S G+  + M+   YPF    +  N    + R +S+ +  
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL-RSVSIEFP- 249
Query: 108 PGYVRVSLECRHLLSRIFV-ADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
           P +    ++    + R+ +  DP KR     +    W    LP++  +E
Sbjct: 250 PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW----LPVKHQDE 294

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 146 IIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 203
Query: 63  KIADVWSCGVTLYVMLVGA--YPFED----------------PEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+     +P  D                PE  +  + T++  +   
Sbjct: 204 NV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE-- 260
Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y  ++                      + R LLS++ V DP KRI++ +  +HP+
Sbjct: 261 -NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 319
Query: 144 F 144
Sbjct: 320 I 320

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 2   QICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPE 53
           +I H D+K +N LL  DGS A    +CDFG++         K  +      GT  ++APE
Sbjct: 186 RILHGDVKADNVLLSSDGSHA---ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 54  VLSRKEYDGKIADVWSCGVTLYVMLVGAYPF 84
           V+  +  D K+ DVWS    +  ML G +P+
Sbjct: 243 VVLGRSCDAKV-DVWSSCCMMLHMLNGCHPW 272

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I H DLK EN LL       +K+ DFG   S   H +  + + +  Y APEV+    Y 
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARY- 276
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPED 89
           G   D+WS G  L  +L G YP    ED
Sbjct: 277 GMPIDMWSLGCILAELLTG-YPLLPGED 303

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 26/166 (15%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLSRKEYD 61
           ICHRD+K +N LLD      LK+ DFG +K  +      S + +  Y APE +     Y 
Sbjct: 162 ICHRDIKPQNLLLDPPSG-VLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYT 220
Query: 62  GKIADVWSCGVTLYVMLVGA--YPFEDPED---------------------PRNFKTTIQ 98
             I D+WS G  +  ++ G   +P E   D                     P   +    
Sbjct: 221 TNI-DIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFP 279
Query: 99  RILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +I    +S     R   +   L+SR+    P  R+T  E   HP+F
Sbjct: 280 QIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I H DLK EN LL       +K+ DFG   S   H +  + + +  Y APEV+    Y 
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARY- 276
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPED 89
           G   D+WS G  L  +L G YP    ED
Sbjct: 277 GMPIDMWSLGCILAELLTG-YPLLPGED 303

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 3   ICHRDLKLENTLLDG--SKAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HRDL+  N  L      AP   K+ DFG S+ SV HS     +G   ++APE +  +E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV-HSV-SGLLGNFQWMAPETIGAEE 202
Query: 60  --YDGKIADVWSCGVTLYVMLVGAYPFED 86
             Y  K AD +S  + LY +L G  PF++
Sbjct: 203 ESYTEK-ADTYSFAMILYTILTGEGPFDE 230

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI  FG ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILGFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 30/172 (17%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L++  +   LKI DFG +++  +   +    V T  Y AP+VL   K+
Sbjct: 120 RVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--------IPGY- 110
           Y   I D+WS G     M+ GA  F    +       I RIL    S        +P Y 
Sbjct: 178 YSTTI-DIWSVGCIFAEMVNGAPLFPGVSEADQL-MRIFRILGTPNSKNWPNVTELPKYD 235
Query: 111 ----VRVSLECRH-----------LLSRIFVADPEKRITIPEIQKHPWFLKN 147
               V   L               LLS++   DP +RIT  +  +H +F +N
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 3   ICHRDLKLENTLLDG--SKAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HRDL+  N  L      AP   K+ DFG S+ SV HS     +G   ++APE +  +E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV-HSV-SGLLGNFQWMAPETIGAEE 202
Query: 60  --YDGKIADVWSCGVTLYVMLVGAYPFED 86
             Y  K AD +S  + LY +L G  PF++
Sbjct: 203 ESYTEK-ADTYSFAMILYTILTGEGPFDE 230

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 144 NVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 58  KEYDGKIADVWSCGVTLYVML---------------------VGAYPFEDPEDPRNFKTT 96
            +   K  D+WS G  L  ML                     +G+   ED     N K  
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKAR 261
Query: 97  IQRILSVHYSIPGYVRV----SLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
              +   H +   + R+      +   LL ++   +P KRI + +   HP+ 
Sbjct: 262 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  Y 
Sbjct: 140 RVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 62  GKIADVWSCGVTLYVML 78
             + D+WS G     M 
Sbjct: 198 TPV-DLWSVGCIFAEMF 213

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI D G ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDAGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI DF  ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDFYLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 148 NVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 206 SKGYTKSIDIWSVGCILAEML 226

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  Y 
Sbjct: 140 RVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 62  GKIADVWSCGVTLYVML 78
             + D+WS G     M 
Sbjct: 198 TPV-DLWSVGCIFAEMF 213

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 148 NVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 206 SKGYTKSIDIWSVGCILAEML 226

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 146 NVLHRDLKPSNLLLNTTSD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 204 SKGYTKSIDIWSVGCILAEML 224

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  Y 
Sbjct: 140 RVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 62  GKIADVWSCGVTLYVML 78
             + D+WS G     M 
Sbjct: 198 TPV-DLWSVGCIFAEMF 213

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 144 NVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 202 SKGYTKSIDIWSVGCILAEML 222

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 164 NVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 222 SKGYTKSIDIWSVGCILAEML 242

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRK 58
            I HRD+K  N  L   +   +KI DFG +      S   Q +   G+  ++APEV+  +
Sbjct: 152 NIIHRDMKSNNIFLH--EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 59  EYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           + +     +DV+S G+ LY ++ G  P+       N +  I  ++   Y+ P   ++   
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELPYSHI----NNRDQIIFMVGRGYASPDLSKLYKN 265
Query: 117 CRHLLSRIFVADPEKRI 133
           C   + R+ VAD  K++
Sbjct: 266 CPKAMKRL-VADCVKKV 281

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 37/171 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  ++  +   L+I DFG ++ +    +    V T  Y APE++    +  
Sbjct: 152 IIHRDLKPSNVAVN--EDSELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH--- 119
           +  D+WS G  +  +L G   F       ++   ++RI+ V  +    V   +   H   
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGS----DYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 120 --------------------------LLSRIFVADPEKRITIPEIQKHPWF 144
                                     LL R+ V D ++R++  E   H +F
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 37/171 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  ++  +   L+I DFG ++ +    +    V T  Y APE++    +  
Sbjct: 152 IIHRDLKPSNVAVN--EDSELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH--- 119
           +  D+WS G  +  +L G   F       ++   ++RI+ V  +    V   +   H   
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGS----DYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 120 --------------------------LLSRIFVADPEKRITIPEIQKHPWF 144
                                     LL R+ V D ++R++  E   H +F
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I H DLK EN LL       +K+ DFG   S   H +    + +  Y APEV+    Y 
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYXXIQSRFYRAPEVILGARY- 276
Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPED 89
           G   D+WS G  L  +L G YP    ED
Sbjct: 277 GMPIDMWSLGCILAELLTG-YPLLPGED 303

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI D G ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDRGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N  L  ++   LKI D G ++    H+  + T  V T  Y APE++    +
Sbjct: 146 IIHRDLKPSN--LAVNEDCELKILDGGLAR----HTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 61  DGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   +P  D                         E  RN+ 
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F
Sbjct: 260 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSS------VLH-----------SQPKSTV- 44
           I HRD+K  N L +  +  +  + DFG ++ +      +L            SQ K ++ 
Sbjct: 138 IVHRDVKPSNFLYN-RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC 196
Query: 45  -----------GTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNF 93
                      GTP + APEVL++        D+WS GV    +L G YPF    D    
Sbjct: 197 LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL-- 254
Query: 94  KTTIQRILSVHYS 106
            T + +I+++  S
Sbjct: 255 -TALAQIMTIRGS 266

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 34/169 (20%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLSRKEY 60
           HRD+K EN L+  +K   +K+CDFG+++   L + P       V T  Y +PE+L     
Sbjct: 125 HRDVKPENILI--TKHSVIKLCDFGFAR---LLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 61  DGKIADVWSCGVTLYVMLVGA--YPFE-DPEDPRNFKTTI-------QRILSVHYSIPG- 109
            G   DVW+ G     +L G   +P + D +     + T+       Q++ S +    G 
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 110 --------------YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                         +  +S     LL      DP +R+T  ++  HP+F
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 148 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 206 SKGYTKSIDIWSVGCILAEML 226

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 149 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 207 SKGYTKSIDIWSVGCILAEML 227

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDL   N LL  +    + ICDF  ++     +     V    Y APE++ + +   
Sbjct: 155 VVHRDLHPGNILLADNND--ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT 212
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV----------HYSIPG--- 109
           K+ D+WS G  +  M      F        F   + +I+ V           +S P    
Sbjct: 213 KLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVEVVGTPKIEDVVMFSSPSARD 268
Query: 110 YVRVSLE-----------------CRHLLSRIFVADPEKRITIPEIQKHPWF 144
           Y+R SL                     L++++   +P++RI+  +  +HP+F
Sbjct: 269 YLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDL   N LL  +    + ICDF  ++     +     V    Y APE++ + +   
Sbjct: 155 VVHRDLHPGNILLADNND--ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT 212
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV----------HYSIPG--- 109
           K+ D+WS G  +  M      F        F   + +I+ V           +S P    
Sbjct: 213 KLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVEVVGTPKIEDVVMFSSPSARD 268
Query: 110 YVRVSLE-----------------CRHLLSRIFVADPEKRITIPEIQKHPWF 144
           Y+R SL                     L++++   +P++RI+  +  +HP+F
Sbjct: 269 YLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 149 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 207 SKGYTKSIDIWSVGCILAEML 227

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 150 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 208 SKGYTKSIDIWSVGCILAEML 228

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 141 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 199 SKGYTKSIDIWSVGCILAEML 219

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 148 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 206 SKGYTKSIDIWSVGCILAEML 226

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 142 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 200 SKGYTKSIDIWSVGCILAEML 220

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 152 NVLHRDLKPSNLLLNTT--CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 210 SKGYTKSIDIWSVGCILAEML 230

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 144 NVLHRDLKPSNLLLNTT--CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 202 SKGYTKSIDIWSVGCILAEML 222

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 148 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 206 SKGYTKSIDIWSVGCILAEML 226

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 144 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 202 SKGYTKSIDIWSVGCILAEML 222

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 142 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 200 SKGYTKSIDIWSVGCILAEML 220

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 164 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 222 SKGYTKSIDIWSVGCILAEML 242

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 148 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 206 SKGYTKSIDIWSVGCILAEML 226

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 146 NVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 204 SKGYTKSIDIWSVGCILAEML 224

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L++  +   LKI DFG +++  +   +    V T  Y AP+VL   K+
Sbjct: 120 RVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--------IPGY- 110
           Y   I D+WS G     M+ G   F    +       I RIL    S        +P Y 
Sbjct: 178 YSTTI-DIWSVGCIFAEMVNGTPLFPGVSEADQL-MRIFRILGTPNSKNWPNVTELPKYD 235
Query: 111 ----VRVSLECRH-----------LLSRIFVADPEKRITIPEIQKHPWFLKN 147
               V   L               LLS++   DP +RIT  +  +H +F +N
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++  
Sbjct: 146 NVLHRDLKPSNLLLNTT--CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 204 SKGYTKSIDIWSVGCILAEML 224

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I H DLK EN LL   K   +KI DFG   S  L  +    + +  Y +PEVL    Y
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 61  DGKIADVWSCGVTLYVMLVG 80
           D  I D+WS G  L  M  G
Sbjct: 236 DLAI-DMWSLGCILVEMHTG 254

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I H DLK EN LL   K   +KI DFG   S  L  +    + +  Y +PEVL    Y
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPEVLLGMPY 216
Query: 61  DGKIADVWSCGVTLYVMLVG 80
           D  I D+WS G  L  M  G
Sbjct: 217 DLAI-DMWSLGCILVEMHTG 235

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I H DLK EN LL   K   +KI DFG   S  L  +    + +  Y +PEVL    Y
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 61  DGKIADVWSCGVTLYVMLVG 80
           D  I D+WS G  L  M  G
Sbjct: 236 DLAI-DMWSLGCILVEMHTG 254

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 31/159 (19%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-LHSQPK--------------STVG 45
           M I HRDL   N L+  +K   + + DFG ++  V   +QP+              + VG
Sbjct: 127 MNIIHRDLNSHNCLVRENK--NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 46  TPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPR--NFKTTIQRILSV 103
            P ++APE+++ + YD K+ DV+S G+ L   ++G    +    PR  +F   ++  L  
Sbjct: 185 NPYWMAPEMINGRSYDEKV-DVFSFGIVL-CEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242
Query: 104 H---YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ 139
           +      P +  +++ C  L       DPEKR +  +++
Sbjct: 243 YCPPNCPPSFFPITVRCCDL-------DPEKRPSFVKLE 274

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 3   ICHRDLKLENTLLDG--SKAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I HRDL+  N  L      AP   K+ DF  S+ SV HS     +G   ++APE +  +E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV-HSV-SGLLGNFQWMAPETIGAEE 202
Query: 60  --YDGKIADVWSCGVTLYVMLVGAYPFED 86
             Y  K AD +S  + LY +L G  PF++
Sbjct: 203 ESYTEK-ADTYSFAMILYTILTGEGPFDE 230

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L++  +   LKI DFG +++  +   +    + T  Y AP+VL   K+
Sbjct: 120 RVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--------IPGY- 110
           Y   I D+WS G     M+ G   F    +       I RIL    S        +P Y 
Sbjct: 178 YSTTI-DIWSVGCIFAEMVNGTPLFPGVSEADQL-MRIFRILGTPNSKNWPNVTELPKYD 235
Query: 111 ----VRVSLECRH-----------LLSRIFVADPEKRITIPEIQKHPWFLKN 147
               V   L               LLS++   DP +RIT  +  +H +F +N
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 37/171 (21%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N  ++  +   L+I DFG ++ +    +    V T  Y APE++    +  
Sbjct: 144 IIHRDLKPSNVAVN--EDCELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH--- 119
           +  D+WS G  +  +L G   F       ++   ++RI+ V  +    V   +   H   
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGS----DYIDQLKRIMEVVGTPSPEVLAKISSEHART 255
Query: 120 --------------------------LLSRIFVADPEKRITIPEIQKHPWF 144
                                     LL R+ V D ++R++  E   H +F
Sbjct: 256 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           ++ HRDLK  N  L  +K  ++KI DFG   S     +   + GT  Y++PE +S ++Y 
Sbjct: 156 KLIHRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDY- 212
Query: 62  GKIADVWSCGVTLYVML 78
           GK  D+++ G+ L  +L
Sbjct: 213 GKEVDLYALGLILAELL 229

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEVLSR 57
            HRDL   N L+D +     K+ DFG S+  VL   P +   T        + APE ++ 
Sbjct: 173 VHRDLAARNVLVDSNLV--CKVSDFGLSR--VLEDDPDAAXTTTGGKIPIRWTAPEAIAF 228
Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPF 84
           + +    +DVWS GV ++ V+  G  P+
Sbjct: 229 RTFSSA-SDVWSFGVVMWEVLAYGERPY 255

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 47/192 (24%)
Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLS 56
           + HRDLK  N L+  +G +  R+KI D G+++      +P +     V T  Y APE+L 
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208
Query: 57  RKEYDGKIADVWSCGVTLYVML-----------------------------VGAYPFE-D 86
              +  K  D+W+ G     +L                             V  +P + D
Sbjct: 209 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKD 268
Query: 87  PEDPRNF-----------KTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI 135
            ED +             + T      + Y     V+   +  HLL ++   DP KRIT 
Sbjct: 269 WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS 328
Query: 136 PEIQKHPWFLKN 147
            +  + P+FL++
Sbjct: 329 EQAMQDPYFLED 340

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 4   CHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEVLSR 57
            HRDL   N L+D +     K+ DFG S+  VL   P +   T        + APE ++ 
Sbjct: 173 VHRDLAARNVLVDSNLV--CKVSDFGLSR--VLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228
Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPF 84
           + +    +DVWS GV ++ V+  G  P+
Sbjct: 229 RTFSSA-SDVWSFGVVMWEVLAYGERPY 255

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLSRKE 59
           I HRD+K  N LLD +  P  KI DFG SK      Q        GT  YI PE   +  
Sbjct: 160 IIHRDVKSINILLDENFVP--KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 60  YDGKIADVWSCGVTLYVML 78
              K +DV+S GV L+ +L
Sbjct: 218 LTEK-SDVYSFGVVLFEVL 235

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLSRKE 59
           I HRD+K  N LLD +  P  KI DFG SK      Q        GT  YI PE   +  
Sbjct: 160 IIHRDVKSINILLDENFVP--KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 60  YDGKIADVWSCGVTLYVML 78
              K +DV+S GV L+ +L
Sbjct: 218 LTEK-SDVYSFGVVLFEVL 235

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 27/168 (16%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEY 60
            + HRDLK +N L++  +   LK+ DFG +++  +  +  S  V T  Y  P+VL   + 
Sbjct: 121 NVLHRDLKPQNLLIN--RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV--------HYSIPGYV- 111
                D+WS G     +   A P     D  +    I R+L             +P Y  
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 112 ---------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                          +++   R LL  +   +P +RI+  E  +HP+F
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK  N LLD +    LK+ DFG +KS    +      V T  Y APE+L      
Sbjct: 133 ILHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 62  GKIADVWSCGVTLYVMLV 79
           G   D+W+ G  L  +L+
Sbjct: 191 GVGVDMWAVGCILAELLL 208

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 19/130 (14%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV------LHSQPKSTVGTPAYIAPEVL 55
           +  HRDL   N +LD  +   +K+ DFG ++  +      +H++  + +    ++A E L
Sbjct: 154 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV-KWMALESL 210
Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPG 109
             +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y    
Sbjct: 211 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDP 266
Query: 110 YVRVSLECRH 119
              V L+C H
Sbjct: 267 LYEVMLKCWH 276

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 51/196 (26%)
Query: 3   ICHRDLKLENTLLDGSKAP----RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I H D+K EN L++   +P    ++KI D G   +        +++ T  Y +PEVL   
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTT---IQRILSVHYSIPGYV---- 111
            + G  AD+WS    ++ ++ G + FE P++  ++      I +I+ +   +P Y+    
Sbjct: 211 PW-GCGADIWSTACLIFELITGDFLFE-PDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 268
Query: 112 ---RVSLECRHLLSRI----------------------------FVA-----DPEKRITI 135
              R     R LL  I                            F++     DP KR   
Sbjct: 269 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328
Query: 136 PEIQKHPWFLKNLPIE 151
             +  HPW    L +E
Sbjct: 329 GGLVNHPWLKDTLGME 344

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N  L   +   +KI DFG +      S   Q +   G+  ++APEV+  ++
Sbjct: 153 IIHRDLKSNNIFL--HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   C
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSNC 266
Query: 118 RHLLSRIFV 126
              + R+  
Sbjct: 267 PKAMKRLMA 275

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 51/196 (26%)
Query: 3   ICHRDLKLENTLLDGSKAP----RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I H D+K EN L++   +P    ++KI D G   +        +++ T  Y +PEVL   
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTT---IQRILSVHYSIPGYV---- 111
            + G  AD+WS    ++ ++ G + FE P++  ++      I +I+ +   +P Y+    
Sbjct: 211 PW-GCGADIWSTACLIFELITGDFLFE-PDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 268
Query: 112 ---RVSLECRHLLSRI----------------------------FVA-----DPEKRITI 135
              R     R LL  I                            F++     DP KR   
Sbjct: 269 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328
Query: 136 PEIQKHPWFLKNLPIE 151
             +  HPW    L +E
Sbjct: 329 GGLVNHPWLKDTLGME 344

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 4   CHRDLKLENTLL---DGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKE 59
            HRDLK +N LL   D S+ P LKI DFG +++  +   Q    + T  Y  PE+L    
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 60  YDGKIADVWSCGVTLYVMLV 79
           +     D+WS       ML+
Sbjct: 214 HYSTSVDIWSIACIWAEMLM 233

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N  L       +KI DFG +      S   Q +   G+  ++APEV+  ++
Sbjct: 141 IIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFED 86
            +     +DV++ G+ LY ++ G  P+ +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSN 227

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N  L       +KI DFG +      S   Q +   G+  ++APEV+  ++
Sbjct: 141 IIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFED 86
            +     +DV++ G+ LY ++ G  P+ +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSN 227

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N  L       +KI DFG +      S   Q +   G+  ++APEV+  ++
Sbjct: 145 IIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   C
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSNC 258
Query: 118 RHLLSRIFV 126
              + R+  
Sbjct: 259 PKAMKRLMA 267

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N  L   +   +KI DFG +      S   Q +   G+  ++APEV+  ++
Sbjct: 125 IIHRDLKSNNIFL--HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   C
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 118 RHLLSRIFV 126
              + R+  
Sbjct: 239 PKAMKRLMA 247

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 152 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 210 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 265
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 266 YEVMLKCWH 274

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN L+       +K+ DFG ++           V T  Y APEVL +  Y  
Sbjct: 133 IVHRDLKPENILVTSGGT--VKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYAT 190
Query: 63  KIADVWSCGVTLYVML 78
            + D+WS G     M 
Sbjct: 191 PV-DMWSVGCIFAEMF 205

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRDLK  N  L   +   +KI DFG     S+ S  H Q +   G+  ++APEV+  +
Sbjct: 153 IIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQ 209
Query: 59  EYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           + +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 117 CRHLLSRIFV 126
           C   + R+  
Sbjct: 266 CPKAMKRLMA 275

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRDLK  N  L       +KI DFG     S+ S  H Q +   G+  ++APEV+  +
Sbjct: 129 IIHRDLKSNNIFLHEDNT--VKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQ 185
Query: 59  EYD--GKIADVWSCGVTLYVMLVGAYPFED 86
           + +     +DV++ G+ LY ++ G  P+ +
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSN 215

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 18/142 (12%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV----LHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD S    +K+ DFG ++  +       Q       P  + A E L 
Sbjct: 144 KFVHRDLAARNCMLDESFT--VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 57  RKEYDGKIADVWSCGVTLYVMLV-GAYPFE--DPEDPRNFKTTIQRILSVHYSIPGYVRV 113
              +  K +DVWS GV L+ +L  GA P+   DP D  +F    +R+    Y      +V
Sbjct: 202 TYRFTTK-SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQV 260
Query: 114 SLECRHLLSRIFVADPEKRITI 135
             +C       + ADP  R T 
Sbjct: 261 MQQC-------WEADPAVRPTF 275

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN L+       +K+ DFG ++           V T  Y APEVL +  Y  
Sbjct: 141 IVHRDLKPENILVTSGGT--VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYAT 198
Query: 63  KIADVWSCGVTLYVML 78
            + D+WS G     M 
Sbjct: 199 PV-DMWSVGCIFAEMF 213

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN L+       +K+ DFG ++           V T  Y APEVL +  Y  
Sbjct: 133 IVHRDLKPENILVTSGGT--VKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYAT 190
Query: 63  KIADVWSCGVTLYVML 78
            + D+WS G     M 
Sbjct: 191 PV-DMWSVGCIFAEMF 205

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 79/226 (34%), Gaps = 86/226 (38%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS----------------------------S 34
           I HRDLK  N L++   +  +K+CDFG +++                             
Sbjct: 177 ILHRDLKPANCLVNQDCS--VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK 234
Query: 35  VLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML---------------- 78
            L  Q    V T  Y APE++  +E   +  DVWS G     +L                
Sbjct: 235 NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPL 294
Query: 79  ---VGAYPFEDPEDPRN---FKTTIQR-ILSVHYSIPG-----------------YVRV- 113
                 +P    +   N   F T   R  L+V ++I G                 Y+R+ 
Sbjct: 295 FPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIF 354
Query: 114 ---------------SLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                          S +  HLL R+ V +P KRITI E   HP+F
Sbjct: 355 PKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 150 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 208 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 263
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 264 YEVMLKCWH 272

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 171 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 229 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 284
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 285 YEVMLKCWH 293

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRDLK  N  L   +   +KI DFG     S+ S  H Q +   G+  ++APEV+  +
Sbjct: 130 IIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQ 186
Query: 59  EYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           + +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 117 CRHLLSRIFV 126
           C   + R+  
Sbjct: 243 CPKAMKRLMA 252

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 145 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 203 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 258
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 259 YEVMLKCWH 267

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 172 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 230 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 285
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 286 YEVMLKCWH 294

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 153 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 211 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 266
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 267 YEVMLKCWH 275

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRDLK  N  L   +   +KI DFG     S+ S  H Q +   G+  ++APEV+  +
Sbjct: 152 IIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQ 208
Query: 59  EYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           + +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSN 264
Query: 117 CRHLLSRIFV 126
           C   + R+  
Sbjct: 265 CPKAMKRLMA 274

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVLSRKEY 60
           HRDL   N LLD  +   +KI DFG +K+        + +    +P +  APE L  KEY
Sbjct: 157 HRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL--KEY 212
Query: 61  DGKIA-DVWSCGVTLYVMLV 79
               A DVWS GVTLY +L 
Sbjct: 213 KFYYASDVWSFGVTLYELLT 232

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 151 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 209 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 264
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 265 YEVMLKCWH 273

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 153 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 211 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 266
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 267 YEVMLKCWH 275

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 148 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 206 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 261
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 262 YEVMLKCWH 270

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRDLK  N  L   +   +KI DFG     S+ S  H Q +   G+  ++APEV+  +
Sbjct: 130 IIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQ 186
Query: 59  EYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           + +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 117 CRHLLSRIFV 126
           C   + R+  
Sbjct: 243 CPKAMKRLMA 252

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPA-YIAPEVLS 56
           +  HRDL   N +LD  +   +K+ DFG ++            K+    P  ++A E L 
Sbjct: 152 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPGY 110
            +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y     
Sbjct: 210 TQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDPL 265
Query: 111 VRVSLECRH 119
             V L+C H
Sbjct: 266 YEVMLKCWH 274

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N  L   +   +KI DFG +      S   Q +   G+  ++APEV+  ++
Sbjct: 125 IIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   C
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 118 RHLLSRIFV 126
              + R+  
Sbjct: 239 PKAMKRLMA 247

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV------LHSQPKSTVGTPAYIAPEVL 55
           +  HRDL   N +LD  +   +K+ DFG ++         +H++  + +    ++A E L
Sbjct: 154 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESL 210
Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPG 109
             +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y    
Sbjct: 211 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDP 266
Query: 110 YVRVSLECRH 119
              V L+C H
Sbjct: 267 LYEVMLKCWH 276

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV------LHSQPKSTVGTPAYIAPEVL 55
           +  HRDL   N +LD  +   +K+ DFG ++         +H++  + +    ++A E L
Sbjct: 153 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESL 209
Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPG 109
             +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y    
Sbjct: 210 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDP 265
Query: 110 YVRVSLECRH 119
              V L+C H
Sbjct: 266 LYEVMLKCWH 275

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVL 55
           +  HRDL   N +LD  +   +K+ DFG ++         +H++  + +    ++A E L
Sbjct: 212 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESL 268
Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPG 109
             +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y    
Sbjct: 269 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDP 324
Query: 110 YVRVSLECRH 119
              V L+C H
Sbjct: 325 LYEVMLKCWH 334

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKE 59
           I HRDLK  N  L       +KI DFG +      S   Q +   G+  ++APEV+  ++
Sbjct: 125 IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   C
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 118 RHLLSRIFV 126
              + R+  
Sbjct: 239 PKAMKRLMA 247

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 33/176 (18%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M I HRD+K  N L+D  +  +L++ D+G ++      +    V +  +  PE+L   + 
Sbjct: 150 MGIMHRDVKPHNVLID-HEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH--------YSIPGYVR 112
                D+WS G  L  M+    PF    D  +    I ++L           Y+I    R
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 113 ----------------VSLECRHLLS--------RIFVADPEKRITIPEIQKHPWF 144
                           V  E +HL+S        ++   D + R+T  E  +HP+F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           I HRDLK  N  L   +   +KI DFG     S+ S  H Q +   G+  ++APEV+  +
Sbjct: 127 IIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQ 183
Query: 59  EYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           + +     +DV++ G+ LY ++ G  P+ +     N +  I  ++   Y  P   +V   
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNI----NNRDQIIFMVGRGYLSPDLSKVRSN 239
Query: 117 CRHLLSRIFV 126
           C   + R+  
Sbjct: 240 CPKAMKRLMA 249

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV------LHSQPKSTVGTPAYIAPEVL 55
           +  HRDL   N +LD  +   +K+ DFG ++         +H++  + +    ++A E L
Sbjct: 158 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESL 214
Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPG 109
             +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y    
Sbjct: 215 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDP 270
Query: 110 YVRVSLECRH 119
              V L+C H
Sbjct: 271 LYEVMLKCWH 280

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVL 55
           +  HRDL   N +LD  +   +K+ DFG ++         +H++  + +    ++A E L
Sbjct: 151 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESL 207
Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPG 109
             +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y    
Sbjct: 208 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDP 263
Query: 110 YVRVSLECRH 119
              V L+C H
Sbjct: 264 LYEVMLKCWH 273

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVL 55
           +  HRDL   N +LD  +   +K+ DFG ++         +H++  + +    ++A E L
Sbjct: 153 KFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESL 209
Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTI-----QRILSVHYSIPG 109
             +++  K +DVWS GV L+ +M  GA P+ D      F  T+     +R+L   Y    
Sbjct: 210 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN---TFDITVYLLQGRRLLQPEYCPDP 265
Query: 110 YVRVSLECRH 119
              V L+C H
Sbjct: 266 LYEVMLKCWH 275

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVLSRKEY 60
           HR+L   N LLD  +   +KI DFG +K+      + + +    +P +  APE L  KEY
Sbjct: 140 HRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL--KEY 195
Query: 61  DGKIA-DVWSCGVTLYVMLV 79
               A DVWS GVTLY +L 
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVLSRKEY 60
           HR+L   N LLD  +   +KI DFG +K+      + + +    +P +  APE L  KEY
Sbjct: 140 HRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL--KEY 195
Query: 61  DGKIA-DVWSCGVTLYVMLV 79
               A DVWS GVTLY +L 
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN L+       +K+ DFG ++           V T  Y APEVL +  Y  
Sbjct: 133 IVHRDLKPENILVTSGGT--VKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYAT 190
Query: 63  KIADVWSCGVTLYVML 78
            + D+WS G     M 
Sbjct: 191 PV-DMWSVGCIFAEMF 205

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLSR 57
            + HRDLK  N LL+ +    LKI DFG ++ +   H         V T  Y APE++  
Sbjct: 144 NVLHRDLKPSNLLLNTTXD--LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 58  KEYDGKIADVWSCGVTLYVML 78
            +   K  D+WS G  L  ML
Sbjct: 202 SKGYTKSIDIWSVGCILAEML 222

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 33/176 (18%)
Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M I HRD+K  N ++D  +  +L++ D+G ++      +    V +  +  PE+L   + 
Sbjct: 155 MGIMHRDVKPHNVMID-HEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 213
Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH--------YSIPGYVR 112
                D+WS G  L  M+    PF    D  +    I ++L           Y+I    R
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 273
Query: 113 ----------------VSLECRHLLS--------RIFVADPEKRITIPEIQKHPWF 144
                           V  E +HL+S        ++   D + R+T  E  +HP+F
Sbjct: 274 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I    L   + ++D     R+ + D  +S       Q    +  PA++APE L +K  D 
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKFS------FQSPGRMYAPAWVAPEALQKKPEDT 187
Query: 63  --KIADVWSCGVTLYVMLVGAYPFED 86
             + AD+WS  V L+ ++    PF D
Sbjct: 188 NRRSADMWSFAVLLWELVTREVPFAD 213

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	225
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-113
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-76
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-71
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-59
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-59
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-59
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-59
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-58
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-58
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-58
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-57
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-56
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-56
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-56
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-55
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-55
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-55
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-55
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-53
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-46
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-45
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-45
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-44
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	9e-44
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-42
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-42
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-42
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-41
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-41
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-41
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-41
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-41
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-40
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-40
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-40
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-40
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-40
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-40
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-40
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-40
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	8e-40
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-39
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-39
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-39
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-39
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-39
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-39
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-39
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-39
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-39
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-39
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-39
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-39
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	9e-39
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-38
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-38
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-38
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-38
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-38
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-38
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-38
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-38
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-37
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-36
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-35
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-35
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-35
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-35
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	8e-35
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-34
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-34
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-34
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	6e-34
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-33
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-33
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-33
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-33
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-33
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-33
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	9e-33
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-32
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-32
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-32
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-32
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-32
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-32
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-31
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-31
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-31
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-31
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	7e-31
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-30
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-30
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-28
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-27
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-25
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-24
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-24
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-23
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-23
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-22
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-21
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-21
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-21
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-21
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-20
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-20
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-20
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	9e-20
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-20
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-19
3q4u_A	301	Activin receptor type-1; structural genomics conso	9e-19
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-18
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-18
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-17
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-17
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-17
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-17
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-17
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-17
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-17
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-17
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-17
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	9e-17
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-16
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-16
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-16
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-16
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-16
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-16
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-16
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	8e-16
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-15
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-15
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-15
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-15
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	6e-15
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-14
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-14
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-14
3ork_A	311	Serine/threonine protein kinase; structural genomi	5e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-14
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-13
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-13
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-13
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-13
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	7e-13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	7e-13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-13
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	9e-13
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-12
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-12
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-12
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-11
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-11
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-11
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-10
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	5e-09
3rp9_A	458	Mitogen-activated protein kinase; structural genom	7e-09
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-07
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	7e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	9e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	6e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	7e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-04

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  328 bits (843), Expect = e-113
 Identities = 151/228 (66%), Positives = 174/228 (76%), Gaps = 4/228 (1%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           MQICHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL R+EY
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           DGKIADVWSCGVTLYVMLVGAYPFEDPE+PR+++ TIQRILSV YSIP  +R+S EC HL
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ 180
           +SRIFVADP  RI+IPEI+ H WFLKNLP + M E     Q  +     QS++ I+ II 
Sbjct: 255 ISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIIS 314

Query: 181 EARKPGEGPKFGGQCLIGGSMDLDDLDTDADTD---DIETSGDFVCAL 225
           EA  P    +     +    +DLDD   D D++   DI++SG+ V AL
Sbjct: 315 EATIPAVRNRCLDDFMTDN-LDLDDDMDDFDSESEIDIDSSGEIVYAL 361

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  231 bits (592), Expect = 3e-76
 Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 12/195 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSR 57
           + I HRD+K EN LLD      LKI DFG +     +++        GT  Y+APE+L R
Sbjct: 124 IGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           +E+  +  DVWSCG+ L  ML G  P++ P D                 +  + ++    
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDWKEKKTYLNPWKKIDSAP 238

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDE----NDQSQSIE 173
             LL +I V +P  RITIP+I+K  W+ K L          S    +     +   QS  
Sbjct: 239 LALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNL 298

Query: 174 EILGIIQEARKPGEG 188
           +   +   +R PG G
Sbjct: 299 DFSPVNSASRTPGSG 313

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  218 bits (558), Expect = 1e-71
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 8/152 (5%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSR 57
           + I HRD+K EN LLD      LKI DFG +     +++        GT  Y+APE+L R
Sbjct: 124 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           +E+  +  DVWSCG+ L  ML G  P++ P D                 +  + ++    
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDWKEKKTYLNPWKKIDSAP 238

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
             LL +I V +P  RITIP+I+K  W+ K L 
Sbjct: 239 LALLHKILVENPSARITIPDIKKDRWYNKPLK 270

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  189 bits (483), Expect = 1e-59
 Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 9/179 (5%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD +    +KI DFG S      +  K++ G+P Y APEV++ K Y G
Sbjct: 129 IVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWSCG+ LYVMLVG  PF+D           +++ S  Y +P +  +S   + L+ 
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDE----FIPNLFKKVNSCVYVMPDF--LSPGAQSLIR 240

Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE 181
           R+ VADP +RITI EI++ PWF  NLP +++   E       ++     + E +G  ++
Sbjct: 241 RMIVADPMQRITIQEIRRDPWFNVNLP-DYLRPMEEVQGSYADSRIVSKLGEAMGFSED 298

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  193 bits (491), Expect = 2e-59
 Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 8/179 (4%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G
Sbjct: 137 VVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 194

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D+WS GV LY +L G  PF+D     +  T  ++I    +  P Y  ++     LL 
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDD----HVPTLFKKICDGIFYTPQY--LNPSVISLLK 248

Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE 181
            +   DP KR TI +I++H WF ++LP     ED        +++  + + E     +E
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEE 307

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  186 bits (474), Expect = 6e-59
 Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 8/147 (5%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S + Y G
Sbjct: 132 VVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D+WSCGV LY +L G  PF+D     +  T  ++I    + IP Y  ++     LL 
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDE----HVPTLFKKIRGGVFYIPEY--LNRSVATLLM 243

Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLP 149
            +   DP KR TI +I++H WF ++LP
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQDLP 270

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  184 bits (469), Expect = 3e-58
 Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 10/154 (6%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I HRDL L N LL  +    +KI DFG +    +  +   T+ GTP YI+PE+ +R  + 
Sbjct: 133 ILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHG 190

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            + +DVWS G   Y +L+G  PF+        K T+ +++   Y +P ++  S+E + L+
Sbjct: 191 LE-SDVWSLGCMFYTLLIGRPPFDTD----TVKNTLNKVVLADYEMPSFL--SIEAKDLI 243

Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
            ++   +P  R+++  +  HP+  +N   +  +E
Sbjct: 244 HQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDE 277

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  185 bits (472), Expect = 4e-58
 Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 9/179 (5%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK EN LLD      +KI DFG+S    +  +  +  G P Y APE+   K+YDG
Sbjct: 135 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              DVWS GV LY ++ G+ PF+      N K   +R+L   Y IP Y  +S +C +LL 
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLK 246

Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE 181
           R  V +P KR T+ +I K  W       + ++      +    + +   I   +G  QE
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEP-ELDISDQKRIDIMVGMGYSQE 304

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  184 bits (468), Expect = 8e-58
 Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 17/151 (11%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYS-----KSSVLHSQPKSTVGTPAYIAPEVLS- 56
           I HRD+K  N L+       +KI DFG S       ++L +    TVGTPA++APE LS 
Sbjct: 158 IIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALLSN----TVGTPAFMAPESLSE 211

Query: 57  -RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
            RK + GK  DVW+ GVTLY  + G  PF D            +I S     P    ++ 
Sbjct: 212 TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE----RIMCLHSKIKSQALEFPDQPDIAE 267

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
           + + L++R+   +PE RI +PEI+ HPW  +
Sbjct: 268 DLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  182 bits (464), Expect = 4e-57
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLS-RK 58
           I H+D+K  N LL       LKI   G +++    +     +++ G+PA+  PE+ +   
Sbjct: 130 IVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD 187

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            + G   D+WS GVTLY +  G YPFE      N     + I    Y+IPG         
Sbjct: 188 TFSGFKVDIWSAGVTLYNITTGLYPFEGD----NIYKLFENIGKGSYAIPGD--CGPPLS 241

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
            LL  +   +P KR +I +I++H WF K  P
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  180 bits (458), Expect = 2e-56
 Identities = 54/147 (36%), Positives = 74/147 (50%), Gaps = 10/147 (6%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEY 60
           ++ HRDLKL N  L+      +KI DFG +       + K  + GTP YIAPEVLS+K +
Sbjct: 135 RVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             +  DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++  +     L
Sbjct: 193 SFE-VDVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPKHI--NPVAASL 245

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKN 147
           + ++   DP  R TI E+    +F   
Sbjct: 246 IQKMLQTDPTARPTINELLNDEFFTSG 272

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  179 bits (456), Expect = 3e-56
 Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 10/162 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            ++ HRD+K EN LL  +    LKI DFG+S      S+     GT  Y+ PE++  + +
Sbjct: 128 KRVIHRDIKPENLLLGSAG--ELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMH 184

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D K  D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L
Sbjct: 185 DEK-VDLWSLGVLCYEFLVGKPPFEAN----TYQETYKRISRVEFTFPDFV--TEGARDL 237

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQK 162
           +SR+   +P +R  + E+ +HPW   N       +++ S  K
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASK 279

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  180 bits (458), Expect = 7e-56
 Identities = 54/146 (36%), Positives = 73/146 (50%), Gaps = 10/146 (6%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           + HRDLKL N  L+      +KI DFG +       + K  + GTP YIAPEVLS+K + 
Sbjct: 162 VIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
            +  DVWS G  +Y +LVG  PFE        K T  RI    YSIP ++  +     L+
Sbjct: 220 FE-VDVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPKHI--NPVAASLI 272

Query: 122 SRIFVADPEKRITIPEIQKHPWFLKN 147
            ++   DP  R TI E+    +F   
Sbjct: 273 QKMLQTDPTARPTINELLNDEFFTSG 298

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  179 bits (456), Expect = 1e-55
 Identities = 57/165 (34%), Positives = 72/165 (43%), Gaps = 21/165 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYS---KSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K EN L+D ++   LK+ DFG     K +V         GT  Y  PE +    
Sbjct: 170 VLHRDIKDENILIDLNRG-ELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHR 224

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y G+ A VWS G+ LY M+ G  PFE  E           I+           VS EC+H
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDE----------EIIRGQVFFRQR--VSSECQH 272

Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLK-NLPIEFMEEDEGSMQKG 163
           L+       P  R T  EIQ HPW     LP E  E    S+  G
Sbjct: 273 LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPG 317

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  177 bits (451), Expect = 2e-55
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRD+K EN L+       LKI DFG+S  +    + ++  GT  Y+ PE++  K +D 
Sbjct: 135 VIHRDIKPENLLMGYKG--ELKIADFGWSVHAP-SLRRRTMCGTLDYLPPEMIEGKTHDE 191

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           K  D+W  GV  Y  LVG  PF+ P    +   T +RI++V    P ++  S   + L+S
Sbjct: 192 K-VDLWCAGVLCYEFLVGMPPFDSP----SHTETHRRIVNVDLKFPPFL--SDGSKDLIS 244

Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLP 149
           ++    P +R+ +  + +HPW   N  
Sbjct: 245 KLLRYHPPQRLPLKGVMEHPWVKANSR 271

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  177 bits (451), Expect = 8e-55
 Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
             ICHRD+K  N L+D +   R+K+ DFG S+      +      + GT  ++ PE  S 
Sbjct: 171 KNICHRDVKPSNILMDKNG--RVKLSDFGESEYMVDKKIKG----SRGTYEFMPPEFFSN 224

Query: 58  KE-YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR---- 112
           +  Y+G   D+WS G+ LYVM     PF       +       I + +   P        
Sbjct: 225 ESSYNGAKVDIWSLGICLYVMFYNVVPFSLK---ISLVELFNNIRTKNIEYPLDRNHFLY 281

Query: 113 -------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGS 159
                        +S E    L      +P +RIT  +  KH W       +  E  +  
Sbjct: 282 PLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKEL 341

Query: 160 MQK 162
            +K
Sbjct: 342 YKK 344

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  176 bits (449), Expect = 8e-55
 Identities = 47/150 (31%), Positives = 61/150 (40%), Gaps = 20/150 (13%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYS---KSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + HRD+K EN L+D  +    K+ DFG                  GT  Y  PE +SR +
Sbjct: 160 VVHRDIKDENILID-LRRGCAKLIDFGSGALLHDEPYTD----FDGTRVYSPPEWISRHQ 214

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y    A VWS G+ LY M+ G  PFE            Q IL      P +  VS +C  
Sbjct: 215 YHALPATVWSLGILLYDMVCGDIPFER----------DQEILEAELHFPAH--VSPDCCA 262

Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           L+ R     P  R ++ EI   PW      
Sbjct: 263 LIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  174 bits (442), Expect = 1e-53
 Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 18/185 (9%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRD+K EN ++       +K+ DFG +          +  GT  Y APEVL    Y G
Sbjct: 151 IIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRG 208

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              ++WS GVTLY ++    PF +          ++  +      P    VS E   L+S
Sbjct: 209 PELEMWSLGVTLYTLVFEENPFCE----------LEETVEAAIHPPYL--VSKELMSLVS 256

Query: 123 RIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEA 182
            +    PE+R T+ ++   PW  + + +     +E        N     +     +    
Sbjct: 257 GLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEE----VFRVNKPESGVLSAASLEMGN 312

Query: 183 RKPGE 187
           R   +
Sbjct: 313 RSLSD 317

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  154 bits (390), Expect = 8e-46
 Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 12/155 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-----KSTVGTPAYIAPEVL 55
             ICHRD+K EN L   +K+  +K+ DFG SK     +        +  GTP ++APEVL
Sbjct: 187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246

Query: 56  SRKEYD-GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVR 112
           +      G   D WS GV L+++L+GA PF    D      TI ++L+         Y  
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD----TISQVLNKKLCFENPNYNV 302

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
           +S   R LLS +   + ++R       +HPW  + 
Sbjct: 303 LSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF 337

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  152 bits (386), Expect = 4e-45
 Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 25/207 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I H DLK  N L+       LK+ DFG +             S VGT  Y+ PE +    
Sbjct: 129 IVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185

Query: 60  YD----------GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG 109
                          +DVWS G  LY M  G  PF+      N  + +  I+  ++ I  
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII---NQISKLHAIIDPNHEIEF 242

Query: 110 YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF------LKNLPIEFMEEDEGSMQKG 163
                 + + +L      DP++RI+IPE+  HP+       +  +     EE +  + + 
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQL 302

Query: 164 DENDQSQSIEEILGIIQEARKPGEGPK 190
              +   SI +    + E    GE   
Sbjct: 303 VGLNSPNSILKAAKTLYEHYSGGESHN 329

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  150 bits (382), Expect = 7e-45
 Identities = 43/158 (27%), Positives = 63/158 (39%), Gaps = 19/158 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           I H DLK  N L+       LK+ DFG +             S VGT  Y+ PE +    
Sbjct: 148 IVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204

Query: 60  YD----------GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG 109
                          +DVWS G  LY M  G  PF+      N  + +  I+  ++ I  
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII---NQISKLHAIIDPNHEIEF 261

Query: 110 YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
                 + + +L      DP++RI+IPE+  HP+    
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  151 bits (383), Expect = 3e-44
 Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 25/207 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKE 59
           I H DLK  N L+       LK+ DFG +      +      S VG   Y+ PE +    
Sbjct: 176 IVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232

Query: 60  YD----------GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG 109
                          +DVWS G  LY M  G  PF+      N  + +  I+  ++ I  
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII---NQISKLHAIIDPNHEIEF 289

Query: 110 YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF------LKNLPIEFMEEDEGSMQKG 163
                 + + +L      DP++RI+IPE+  HP+       +  +     EE +  + + 
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQL 349

Query: 164 DENDQSQSIEEILGIIQEARKPGEGPK 190
              +   SI +    + E    GE   
Sbjct: 350 VGLNSPNSILKAAKTLYEHYSGGESHN 376

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  148 bits (375), Expect = 9e-44
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 34/181 (18%)

Query: 3   ICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR--- 57
           I HR++K  N +    +  +   K+ DFG ++      Q  S  GT  Y+ P++  R   
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVL 192

Query: 58  -----KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS------ 106
                K+Y     D+WS GVT Y    G+ PF   E PR  K  + +I++   S      
Sbjct: 193 RKDHQKKYGAT-VDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV 251

Query: 107 -------------IPGYVRVSLECR----HLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
                        +P    +S   +     +L+ I  AD EK     +       + +  
Sbjct: 252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311

Query: 150 I 150
            
Sbjct: 312 N 312

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  144 bits (366), Expect = 1e-42
 Identities = 52/153 (33%), Positives = 75/153 (49%), Gaps = 11/153 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + + HRDLK EN L   + +P   LK+ DFG +         ++ VGTP Y++P+VL   
Sbjct: 125 LNVAHRDLKPENFLFL-TDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL 183

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
            Y G   D WS GV +YV+L G  PF  P D         +I    ++ P      VS +
Sbjct: 184 -Y-GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML----KIREGTFTFPEKDWLNVSPQ 237

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              L+ R+    P++RIT  +  +H WF K L 
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  145 bits (366), Expect = 6e-42
 Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 25/152 (16%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS------ 56
           + H  L+  + +LD      + +  F      V       +  +  +  PE+ +      
Sbjct: 227 LVHTYLRPVDIVLDQRG--GVFLTGFE---HLVRDGARVVSSVSRGFEPPELEARRATIS 281

Query: 57  ----RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR 112
               R+       D W+ G+ +Y +     P              + I     +IP    
Sbjct: 282 YHRDRRTLMTFSFDAWALGLVIYWIWCADLPITK----DAALGGSEWIFRSCKNIPQ--- 334

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                R LL        E R+   +  + P +
Sbjct: 335 ---PVRALLEGFLRYPKEDRLLPLQAMETPEY 363

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  145 bits (368), Expect = 7e-42
 Identities = 54/149 (36%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 1   MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
             I HRDLK EN LL    +   +KI DFG+SK     S  ++  GTP Y+APEVL    
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 317

Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSL 115
                +  D WS GV L++ L G  PF +     + K    +I S  Y+    V   VS 
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSE 374

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +   L+ ++ V DP+ R T  E  +HPW 
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWL 403

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  141 bits (359), Expect = 1e-41
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             + H+DLK EN L     +P   +KI DFG ++         +  GT  Y+APEV  ++
Sbjct: 143 QHVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF-KR 200

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR-VSLEC 117
           +   K  D+WS GV +Y +L G  PF         +    +      +     R ++ + 
Sbjct: 201 DVTFK-CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ----KATYKEPNYAVECRPLTPQA 255

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWF 144
             LL ++   DPE+R +  ++  H WF
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWF 282

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  142 bits (360), Expect = 2e-41
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 1   MQICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRK 58
           + + HRDLK EN L  D +    +KI DFG+++     +QP  T   T  Y APE+L++ 
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN 184

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTI---QRILSVHYSIPGYV--RV 113
            YD +  D+WS GV LY ML G  PF+  +      + +   ++I    +S  G     V
Sbjct: 185 GYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243

Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
           S E + L+  +   DP KR+ +  ++ + W    
Sbjct: 244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  142 bits (360), Expect = 2e-41
 Identities = 54/149 (36%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 1   MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
             I HRDLK EN LL    +   +KI DFG+SK     S  ++  GTP Y+APEVL    
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 192

Query: 60  YD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSL 115
                +  D WS GV L++ L G  PF +     + K    +I S  Y+    V   VS 
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSE 249

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +   L+ ++ V DP+ R T  E  +HPW 
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWL 278

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  141 bits (357), Expect = 3e-41
 Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 10/153 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HR+LK EN LL  SKA    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 124 NGIVHRNLKPENLLLA-SKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
            Y  K  D+W+CGV LY++LVG  PF D +  R +     +I +  Y  P   +  V+ E
Sbjct: 183 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLY----AQIKAGAYDYPSPEWDTVTPE 237

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
            + L+  +   +P+KRIT  +  K PW      
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALKVPWICNRER 270

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  142 bits (360), Expect = 3e-41
 Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 7/151 (4%)

Query: 1   MQICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRK 58
             I HRD+K EN L     K   LK+ DFG++K         ++   TP Y+APEVL  +
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPE 204

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
           +YD K  D+WS GV +Y++L G  PF             +RI    Y  P      VS +
Sbjct: 205 KYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            + L+  +   DP +R+TI +   HPW  ++
Sbjct: 264 AKQLIRLLLKTDPTERLTITQFMNHPWINQS 294

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  140 bits (354), Expect = 1e-40
 Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 25/170 (14%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS---------------SVLHSQPKSTVGTP 47
           I HRDLK  N  +D S+   +KI DFG +K+                       S +GT 
Sbjct: 137 IIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194

Query: 48  AYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI 107
            Y+A EVL    +  +  D++S G+  + M+   YPF            ++++ SV    
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM---ERVNILKKLRSVSIEF 248

Query: 108 PGYV--RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
           P           + ++  +   DP KR     +    W       E ++E
Sbjct: 249 PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKE 298

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  140 bits (356), Expect = 1e-40
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 1   MQICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSR 57
             + HRDLK  N L   +      ++ICDFG++K     +    T   T  ++APEVL R
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSL 115
           + YD    D+WS GV LY ML G  PF +  D    +  + RI S  +S+ G     VS 
Sbjct: 195 QGYD-AACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSGKFSLSGGYWNSVSD 252

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             + L+S++   DP +R+T   + +HPW 
Sbjct: 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  138 bits (351), Expect = 2e-40
 Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 13/158 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++     
Sbjct: 143 LNIVHRDLKPENILLD-DDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 200

Query: 61  D-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RV 113
           D     GK  D+WS GV +Y +L G+ PF   +         + I+S +Y          
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML----RMIMSGNYQFGSPEWDDY 256

Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
           S   + L+SR  V  P+KR T  E   HP+F + +  E
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  142 bits (361), Expect = 2e-40
 Identities = 57/151 (37%), Positives = 79/151 (52%), Gaps = 11/151 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HRDLK EN LL+ SK     +KI DFG S     +++ K  +GT  YIAPEVL R 
Sbjct: 140 HNIVHRDLKPENILLE-SKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RG 197

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
            YD K  DVWS GV LY++L G  PF      +N    ++R+ +  Y+        +S +
Sbjct: 198 TYDEK-CDVWSAGVILYILLSGTPPFYG----KNEYDILKRVETGKYAFDLPQWRTISDD 252

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            + L+ ++    P  RIT  +  +HPW  K 
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  141 bits (357), Expect = 3e-40
 Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 4/150 (2%)

Query: 1   MQICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + I HRD+K EN L         LK+ DFG++K +  H+   +   TP Y+APEVL  ++
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 239

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLEC 117
           YD K  D+WS GV +Y++L G  PF              RI    Y  P      VS E 
Sbjct: 240 YD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 298

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
           + L+  +   +P +R+TI E   HPW +++
Sbjct: 299 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  142 bits (361), Expect = 3e-40
 Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 11/151 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HRD+K EN LL+ +K     +KI DFG S       + +  +GT  YIAPEVL +K
Sbjct: 165 HNIVHRDIKPENILLE-NKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL-KK 222

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
           +Y+ K  DVWSCGV +Y++L G  PF      +N +  I+++    Y         +S E
Sbjct: 223 KYNEK-CDVWSCGVIMYILLCGYPPFGG----QNDQDIIKKVEKGKYYFDFNDWKNISDE 277

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            + L+  +   D  KR T  E     W  K 
Sbjct: 278 AKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  138 bits (349), Expect = 7e-40
 Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 1   MQICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
            +I H DLK EN +L       P +K+ DFG +       + K+  GTP ++APE+++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLE 116
              G  AD+WS GV  Y++L GA PF           T+  I SV Y      +   S  
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQE----TLANITSVSYDFDEEFFSHTSEL 248

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +  + ++ V +  KR+TI E  +HPW 
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  138 bits (349), Expect = 8e-40
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 9/148 (6%)

Query: 1   MQICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L       PR+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLE 116
              G  AD+WS GV  Y++L GA PF           T+  + +V+Y      +   S  
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVSAVNYEFEDEYFSNTSAL 247

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +  + R+ V DP+KR+TI +  +HPW 
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  139 bits (352), Expect = 8e-40
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 7/149 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I H D+K EN + +  KA  +KI DFG +         K T  T  + APE++ R+  
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
            G   D+W+ GV  YV+L G  PF   +D      T+Q +    +      +  VS E +
Sbjct: 228 -GFYTDMWAIGVLGYVLLSGLSPFAGEDDLE----TLQNVKRCDWEFDEDAFSSVSPEAK 282

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             +  +   +P KR+T+ +  +HPW   +
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEHPWLKGD 311

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  139 bits (351), Expect = 1e-39
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 9/148 (6%)

Query: 1   MQICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
            +I H DLK EN +L       P +K+ DFG +       + K+  GTP ++APE+++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
              G  AD+WS GV  Y++L GA PF           T+  I +V Y      + + S  
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQE----TLANITAVSYDFDEEFFSQTSEL 248

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +  + ++ V +  KR+TI E  +HPW 
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  136 bits (346), Expect = 1e-39
 Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 11/151 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HRDLK EN LL+ SK     +KI DFG S     +++ K  +GT  YIAPEVL R 
Sbjct: 140 HNIVHRDLKPENILLE-SKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RG 197

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
            YD K  DVWS GV LY++L G  PF    +        +R+ +  Y+        +S +
Sbjct: 198 TYDEK-CDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISDD 252

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            + L+ ++    P  RIT  +  +HPW  K 
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  140 bits (356), Expect = 1e-39
 Identities = 52/151 (34%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
            +I HRDLK EN LL+ SK+    ++I DFG S       + K  +GT  YIAPEVL   
Sbjct: 145 NKIVHRDLKPENLLLE-SKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HG 202

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
            YD K  DVWS GV LY++L G  PF       N    ++++    Y+       +VS  
Sbjct: 203 TYDEK-CDVWSTGVILYILLSGCPPFNG----ANEYDILKKVEKGKYTFELPQWKKVSES 257

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            + L+ ++    P  RI+  +   H W    
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWIQTY 288

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  137 bits (348), Expect = 1e-39
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 7/146 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I H D++ EN +    ++  +KI +FG ++        +     P Y APEV      
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
                D+WS G  +YV+L G  PF    + +     I+ I++  Y+     +  +S+E  
Sbjct: 181 -STATDMWSLGTLVYVLLSGINPFLAETNQQ----IIENIMNAEYTFDEEAFKEISIEAM 235

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWF 144
             + R+ V + + R+T  E  +HPW 
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWL 261

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  140 bits (356), Expect = 2e-39
 Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HRDLK EN LL+ SK     +KI DFG S       + K  +GT  YIAPEVL RK
Sbjct: 155 HNIVHRDLKPENLLLE-SKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RK 212

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
           +YD K  DVWS GV L+++L G  PF      +  +  ++++    Y+        VS  
Sbjct: 213 KYDEK-CDVWSIGVILFILLAGYPPFGG----QTDQEILRKVEKGKYTFDSPEWKNVSEG 267

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQK 162
            + L+ ++   D ++RI+  +  +HPW  +    +    +  S+  
Sbjct: 268 AKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLAN 313

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  138 bits (349), Expect = 2e-39
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 13/153 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I HRDLK EN LLD      +++ DFG+S       + +   GTP Y+APE+L     
Sbjct: 219 NNIVHRDLKPENILLD-DNMQ-IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMD 276

Query: 61  D-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RV 113
           +     GK  D+W+CGV L+ +L G+ PF             + I+   Y          
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML----RMIMEGQYQFSSPEWDDR 332

Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
           S   + L+SR+   DPE R+T  +  +HP+F +
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  139 bits (351), Expect = 2e-39
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 34/181 (18%)

Query: 3   ICHRDLKLENTLLDGSKAPR--LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR--- 57
           I HR++K  N +    +  +   K+ DFG ++      Q  S  GT  Y+ P++  R   
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVL 192

Query: 58  -----KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS------ 106
                K+Y     D+WS GVT Y    G+ PF   E PR  K  + +I++   S      
Sbjct: 193 RKDHQKKYGAT-VDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV 251

Query: 107 -------------IPGYVRVSL----ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
                        +P    +S         +L+ I  AD EK     +       + +  
Sbjct: 252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311

Query: 150 I 150
           +
Sbjct: 312 V 312

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  138 bits (349), Expect = 2e-39
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 7/149 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M I H DLK EN L     A ++KI DFG ++      + K   GTP ++APEV++   +
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD-F 264

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
                D+WS GV  Y++L G  PF    D      T+  IL+  +      +  +S E +
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE----TLNNILACRWDLEDEEFQDISEEAK 320

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             +S++ + +   RI+  E  KHPW   +
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLSDH 349

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  136 bits (344), Expect = 2e-39
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 9/148 (6%)

Query: 1   MQICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
            +I H DLK EN +L       PR+K+ DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLE 116
              G  AD+WS GV  Y++L GA PF           T+  I +V+Y      +   S  
Sbjct: 187 PL-GLEADMWSIGVITYILLSGASPFLGETKQE----TLTNISAVNYDFDEEYFSNTSEL 241

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +  + R+ V DP++R+TI +  +H W 
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWI 269

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  137 bits (348), Expect = 2e-39
 Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HR+LK EN LL  SKA    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 147 NGIVHRNLKPENLLLA-SKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
            Y  K  D+W+CGV LY++LVG  PF D +  R +     +I +  Y  P   +  V+ E
Sbjct: 206 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLY----AQIKAGAYDYPSPEWDTVTPE 260

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQK 162
            + L+  +   +P+KRIT  +  K PW      +      + ++  
Sbjct: 261 AKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDC 306

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  136 bits (345), Expect = 3e-39
 Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 25/162 (15%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-------------VGTPAY 49
           I HRDLK+EN LL       +K+CDFG + +   +     +               TP Y
Sbjct: 159 IIHRDLKVENLLLSNQG--TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMY 216

Query: 50  IAPEV--LSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI 107
             PE+  L      G+  D+W+ G  LY++    +PFED            RI++  YSI
Sbjct: 217 RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED--------GAKLRIVNGKYSI 268

Query: 108 PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           P +         L+  +   +PE+R++I E+      +    
Sbjct: 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  136 bits (345), Expect = 4e-39
 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 8/147 (5%)

Query: 1   MQICHRDLKLENTLL-DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
             I H DLK +N LL        +KI DFG S+      + +  +GTP Y+APE+L+   
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDP 209

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
                 D+W+ G+  Y++L    PF   ++      T   I  V+       +  VS   
Sbjct: 210 I-TTATDMWNIGIIAYMLLTHTSPFVGEDNQE----TYLNISQVNVDYSEETFSSVSQLA 264

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWF 144
              +  + V +PEKR T      H W 
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWL 291

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  135 bits (341), Expect = 9e-39
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 13/152 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSR 57
             I HRDLK EN L   +     ++ I DFG SK  +  +    +  GTP Y+APEVL++
Sbjct: 125 NGIVHRDLKPENLLYL-TPEENSKIMITDFGLSK--MEQNGIMSTACGTPGYVAPEVLAQ 181

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSL 115
           K Y  K  D WS GV  Y++L G  PF +  + + F    ++I   +Y         +S 
Sbjct: 182 KPY-SKAVDCWSIGVITYILLCGYPPFYEETESKLF----EKIKEGYYEFESPFWDDISE 236

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             +  +  +   DP +R T  +   HPW   N
Sbjct: 237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  134 bits (340), Expect = 1e-38
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 18/153 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLSR 57
             I HRDLK EN LL+      ++I DFG +K     S+       VGT  Y++PE+L+ 
Sbjct: 149 KGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 206

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K    K +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P       + 
Sbjct: 207 KSA-CKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQKIIKLEYDFPEK--FFPKA 259

Query: 118 RHLLSRIFVADPEKRITIP------EIQKHPWF 144
           R L+ ++ V D  KR+          ++ HP+F
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  140 bits (353), Expect = 1e-38
 Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 20/161 (12%)

Query: 3   ICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           I HRDLK EN +L  G +    KI D GY+K           VGT  Y+APE+L +K+Y 
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYT 201

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQR----ILSVHYSIPGYVRVSL-- 115
               D WS G   +  + G  PF     P  +   ++      + V+  + G V+ S   
Sbjct: 202 VT-VDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVL 260

Query: 116 ------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                       +    L  + +    +R T P+      F
Sbjct: 261 PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCF 301

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  134 bits (340), Expect = 2e-38
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 17/157 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----------VGTPAYIAP 52
             HRDLK  N LL      +  + D G    + +H +                T +Y AP
Sbjct: 155 YAHRDLKPTNILLGDEG--QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212

Query: 53  EVLSRKEYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGY 110
           E+ S + +    +  DVWS G  LY M+ G  P++      +   ++   +    SIP  
Sbjct: 213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD---SVALAVQNQLSIPQS 269

Query: 111 VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            R S     LL+ +   DP +R  IP +      L+ 
Sbjct: 270 PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  135 bits (341), Expect = 2e-38
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 12/152 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSR 57
             I HRD+K    LL  SK     +K+  FG +             VGTP ++APEV+ R
Sbjct: 149 NNIIHRDVKPHCVLLA-SKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSL 115
           + Y GK  DVW CGV L+++L G  PF      R F    + I+   Y +       +S 
Sbjct: 208 EPY-GKPVDVWGCGVILFILLSGCLPFYG-TKERLF----EGIIKGKYKMNPRQWSHISE 261

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             + L+ R+ + DP +RIT+ E   HPW  + 
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKER 293

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  135 bits (341), Expect = 2e-38
 Identities = 57/153 (37%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HRDLK EN L   + AP   LKI DFG SK        K+  GTP Y APE+L   
Sbjct: 167 NGIVHRDLKPENLLYA-TPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGC 225

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
            Y G   D+WS G+  Y++L G  PF D    +      +RIL+  Y         VSL 
Sbjct: 226 AY-GPEVDMWSVGIITYILLCGFEPFYDERGDQF---MFRRILNCEYYFISPWWDEVSLN 281

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
            + L+ ++ V DP+KR+T  +  +HPW      
Sbjct: 282 AKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  138 bits (349), Expect = 3e-38
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
               H DLK EN +    ++  LK+ DFG +         K T GT  + APEV   K  
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECR 118
            G   D+WS GV  Y++L G  PF    D      T++ + S  ++     +  +S + +
Sbjct: 334 -GYYTDMWSVGVLSYILLSGLSPFGGENDDE----TLRNVKSCDWNMDDSAFSGISEDGK 388

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKN 147
             + ++ +ADP  R+TI +  +HPW    
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWLTPG 417

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  135 bits (340), Expect = 4e-38
 Identities = 21/148 (14%), Positives = 49/148 (33%), Gaps = 8/148 (5%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD- 61
           + H     +N  +      RL + D        + ++  ++     Y   E L+      
Sbjct: 215 LVHGHFTPDNLFIMPDG--RLMLGDVSALWK--VGTRGPASSVPVTYAPREFLNASTATF 270

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNF---KTTIQRILSVHYSIPGYVRVSLECR 118
               + W  G+++Y +     PF            + +++   +   +      +    +
Sbjct: 271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVK 330

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK 146
            L+ R    D  +R+   E  + P FL+
Sbjct: 331 TLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  132 bits (333), Expect = 6e-38
 Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            + HRDLK  N  LDG +   +K+ DFG ++  +   S  K+ VGTP Y++PE ++R  Y
Sbjct: 136 TVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPGYVRVSLECRH 119
           + K +D+WS G  LY +     PF       + K    +I    +  IP   R S E   
Sbjct: 194 NEK-SDIWSLGCLLYELCALMPPFTA----FSQKELAGKIREGKFRRIPY--RYSDELNE 246

Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNL 148
           +++R+       R ++ EI ++P  L++ 
Sbjct: 247 IITRMLNLKDYHRPSVEEILENPLILEHH 275

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  134 bits (339), Expect = 2e-37
 Identities = 58/152 (38%), Positives = 82/152 (53%), Gaps = 11/152 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSR 57
           M + HR+LK EN LL  SK     +K+ DFG +       Q      GTP Y++PEVL +
Sbjct: 129 MGVVHRNLKPENLLLA-SKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 187

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSL 115
             Y GK  D+W+CGV LY++LVG  PF D +  R +    Q+I +  Y  P   +  V+ 
Sbjct: 188 DPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFPSPEWDTVTP 242

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
           E + L++++   +P KRIT  E  KHPW    
Sbjct: 243 EAKDLINKMLTINPSKRITAAEALKHPWISHR 274

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  131 bits (331), Expect = 1e-36
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRD+K +N LLD  +   + I DF  +      +Q  +  GT  Y+APE+ S ++  G
Sbjct: 136 IIHRDMKPDNILLD--EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAG 193

Query: 63  --KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
                D WS GVT Y +L G  P+       + K  +    +   + P     S E   L
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHI-RSSTSSKEIVHTFETTVVTYPSA--WSQEMVSL 250

Query: 121 LSRIFVADPEKRI-TIPEIQKHPWF 144
           L ++   +P++R   + ++Q  P+ 
Sbjct: 251 LKKLLEPNPDQRFSQLSDVQNFPYM 275

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  127 bits (321), Expect = 1e-35
 Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 19/150 (12%)

Query: 3   ICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKE 59
           I +RDLK EN LLD  G     +K+ DFG SK S+ H +   +  GT  Y+APEV++R+ 
Sbjct: 147 IIYRDLKPENILLDEEG----HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  + AD WS GV ++ ML G  PF+     ++ K T+  IL     +P +  +S E + 
Sbjct: 203 H-TQSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQS 255

Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LL  +F  +P  R+      + EI++H +F
Sbjct: 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  125 bits (317), Expect = 2e-35
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 13/149 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            ++ +RDLK  N  L  +K  ++KI DFG   S     +   + GT  Y++PE +S ++Y
Sbjct: 141 KKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDY 198

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             +  D+++ G+ L  +L          +   F T ++        I        + + L
Sbjct: 199 GKE-VDLYALGLILAELLHVCDT---AFETSKFFTDLRDG-----IISD--IFDKKEKTL 247

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           L ++    PE R    EI +     K  P
Sbjct: 248 LQKLLSKKPEDRPNTSEILRTLTVWKKSP 276

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  127 bits (321), Expect = 4e-35
 Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 18/148 (12%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKS--SVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + H  L+  + +LD  +   + +  F +     +   S        P   A  +L   ++
Sbjct: 232 LVHTYLRPVDIVLD--QRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQH 289

Query: 61  DGKI----ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
              +     D W+ G+ +Y +     P  D           + I     +IP  V     
Sbjct: 290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG----GSEWIFRSCKNIPQPV----- 340

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            R LL        E R+   +  + P +
Sbjct: 341 -RALLEGFLRYPKEDRLLPLQAMETPEY 367

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  125 bits (316), Expect = 5e-35
 Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 28/176 (15%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSK--------SSVLHSQPKSTVGTPAYI 50
             I HRDLK EN L +        +KICDF            S +   +  +  G+  Y+
Sbjct: 130 KGIAHRDLKPENILCE-HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188

Query: 51  APEVLSRKEYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTI--------- 97
           APEV+     +     K  D+WS GV LY++L G  PF                      
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248

Query: 98  --QRILSVHYSIPGYV--RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
             + I    Y  P      +S   + L+S++ V D ++R++  ++ +HPW     P
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  125 bits (317), Expect = 8e-35
 Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 14/176 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKE 59
            +I HRD+K +N  L   K   +++ DFG ++  +      ++ +GTP Y++PE+   K 
Sbjct: 144 RKILHRDIKSQNIFLT--KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPGYVRVSLECR 118
           Y+ K +D+W+ G  LY +    + FE      + K  + +I+S  +  +      S + R
Sbjct: 202 YNNK-SDIWALGCVLYELCTLKHAFEA----GSMKNLVLKIISGSFPPVSL--HYSYDLR 254

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWF---LKNLPIEFMEEDEGSMQKGDENDQSQS 171
            L+S++F  +P  R ++  I +  +    ++      +  +E  ++   +      
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPI 310

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  126 bits (318), Expect = 2e-34
 Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 34/170 (20%)

Query: 3   ICHRDLKLENTLLDGSKAP-----------RLKICDFGYSK-----SSVLHSQPKSTVGT 46
           I HRDLK +N L+  S              R+ I DFG  K      S   +   +  GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195

Query: 47  PAYIAPEVLSRKEYD------GKIADVWSCGVTLYVMLVGAY-PFEDPEDPRNFKTTIQR 99
             + APE+L             +  D++S G   Y +L     PF D             
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS------RESN 249

Query: 100 ILSVHYSIPGYVR-----VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           I+   +S+          +  E   L+S++   DP KR T  ++ +HP F
Sbjct: 250 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  124 bits (313), Expect = 2e-34
 Identities = 53/150 (35%), Positives = 75/150 (50%), Gaps = 19/150 (12%)

Query: 3   ICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKE 59
           I +RDLK EN +L+  G     +K+ DFG  K S+       T  GT  Y+APE+L R  
Sbjct: 142 IIYRDLKPENIMLNHQG----HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG 197

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           +  +  D WS G  +Y ML GA PF       N K TI +IL    ++P Y  ++ E R 
Sbjct: 198 H-NRAVDWWSLGALMYDMLTGAPPFTG----ENRKKTIDKILKCKLNLPPY--LTQEARD 250

Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LL ++   +   R+        E+Q HP+F
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  123 bits (312), Expect = 3e-34
 Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 15/146 (10%)

Query: 3   ICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKE 59
           I +RDLKL+N LLD  G     +KI DFG  K ++L     +T  GTP YIAPE+L  ++
Sbjct: 139 IVYRDLKLDNILLDKDG----HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK 194

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y     D WS GV LY ML+G  PF      ++ +     I   +   P +  +  E + 
Sbjct: 195 Y-NHSVDWWSFGVLLYEMLIGQSPFHG----QDEEELFHSIRMDNPFYPRW--LEKEAKD 247

Query: 120 LLSRIFVADPEKRI-TIPEIQKHPWF 144
           LL ++FV +PEKR+    +I++HP F
Sbjct: 248 LLVKLFVREPEKRLGVRGDIRQHPLF 273

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  123 bits (312), Expect = 6e-34
 Identities = 53/149 (35%), Positives = 71/149 (47%), Gaps = 18/149 (12%)

Query: 3   ICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKE 59
           I +RDLK EN LLD  G     + + DFG  K ++ H+   ST  GTP Y+APEVL ++ 
Sbjct: 160 IVYRDLKPENILLDSQG----HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y  +  D W  G  LY ML G  PF      RN       IL+    +     ++   RH
Sbjct: 216 Y-DRTVDWWCLGAVLYEMLYGLPPFYS----RNTAEMYDNILNKPLQLKPN--ITNSARH 268

Query: 120 LLSRIFVADPEKRITIP----EIQKHPWF 144
           LL  +   D  KR+       EI+ H +F
Sbjct: 269 LLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  121 bits (306), Expect = 3e-33
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K ++       T  GTP YIAPE+++ + Y 
Sbjct: 142 IIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPY- 198

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PFE      +     Q I+  + + P    +S E   + 
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEG----EDEDELFQSIMEHNVAYPKS--MSKEAVAIC 252

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
             +    P KR+        +I++H +F
Sbjct: 253 KGLMTKHPGKRLGCGPEGERDIKEHAFF 280

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  121 bits (306), Expect = 3e-33
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 16/152 (10%)

Query: 3   ICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
           I +RD+KLEN LLD  G     + + DFG SK  V     ++    GT  Y+AP+++   
Sbjct: 180 IIYRDIKLENILLDSNG----HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235

Query: 59  EY-DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           +    K  D WS GV +Y +L GA PF    +  +     +RIL      P    +S   
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE--MSALA 293

Query: 118 RHLLSRIFVADPEKRI-----TIPEIQKHPWF 144
           + L+ R+ + DP+KR+        EI++H +F
Sbjct: 294 KDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  121 bits (306), Expect = 3e-33
 Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 17/154 (11%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      ST  GTP YIAPE+L  ++Y 
Sbjct: 131 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY- 187

Query: 62  GKIADVWSCGVTLYVMLVGAYPF-----EDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           G   D W+ GV ++ M+ G  PF      D  D        Q IL     IP    +S++
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVK 245

Query: 117 CRHLLSRIFVADPEKRI------TIPEIQKHPWF 144
              +L      DP++R+         +IQ HP+F
Sbjct: 246 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  120 bits (304), Expect = 5e-33
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           + +RD+KLEN +LD  K   +KI DFG  K  +       T  GTP Y+APEVL   +Y 
Sbjct: 126 VVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 182

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF +    ++ +   + IL      P    +S E + LL
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYN----QDHERLFELILMEEIRFPRT--LSPEAKSLL 236

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
           + +   DP++R+        E+ +H +F
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  119 bits (302), Expect = 7e-33
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 16/147 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I +RDLK EN LLD  K   +KI DFG++K   +     +  GTP YIAPEV+S K Y  
Sbjct: 127 IIYRDLKPENILLD--KNGHIKITDFGFAK--YVPDVTYTLCGTPDYIAPEVVSTKPY-N 181

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
           K  D WS G+ +Y ML G  PF D     N   T ++IL+     P +   + + + LLS
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYD----SNTMKTYEKILNAELRFPPF--FNEDVKDLLS 235

Query: 123 RIFVADPEKRI-----TIPEIQKHPWF 144
           R+   D  +R+        +++ HPWF
Sbjct: 236 RLITRDLSQRLGNLQNGTEDVKNHPWF 262

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  121 bits (306), Expect = 8e-33
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 11/153 (7%)

Query: 1   MQICHRDLKLENTLLDGSK---APRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 53
           + I HRDLK  N L+         +  I DFG  K         S+     GT  +IAPE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196

Query: 54  VLSRKEYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV 111
           +LS    +      D++S G   Y ++            R     +              
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEK-- 254

Query: 112 RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
              +  R L+ ++   DP+KR +   + KHP+F
Sbjct: 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  120 bits (303), Expect = 9e-33
 Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD       K+ DFG  K  + +    +T  GTP YIAPE+L    Y 
Sbjct: 145 IIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY- 201

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G   D W+ GV LY ML G  PFE      N     + IL+     P +  +  +   +L
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEA----ENEDDLFEAILNDEVVYPTW--LHEDATGIL 255

Query: 122 SRIFVADPEKRI------TIPEIQKHPWF 144
                 +P  R+          I +HP+F
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  120 bits (303), Expect = 2e-32
 Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 17/154 (11%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N LLD      +K+ D+G  K  +      ST  GTP YIAPE+L  ++Y 
Sbjct: 174 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY- 230

Query: 62  GKIADVWSCGVTLYVMLVGAYPF-----EDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           G   D W+ GV ++ M+ G  PF      D  D        Q IL     IP    +S++
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVK 288

Query: 117 CRHLLSRIFVADPEKRI------TIPEIQKHPWF 144
              +L      DP++R+         +IQ HP+F
Sbjct: 289 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  119 bits (301), Expect = 3e-32
 Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 17/154 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
           M   HRD+K +N LLD  K+  LK+ DFG           +    VGTP YI+PEVL  +
Sbjct: 187 MGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 244

Query: 59  EYD---GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYVRV 113
             D   G+  D WS GV LY MLVG  PF       +   T  +I++     + P    +
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYA----DSLVGTYSKIMNHKNSLTFPDDNDI 300

Query: 114 SLECRHLLSRIFVADPEKRIT---IPEIQKHPWF 144
           S E ++L+   F+ D E R+    + EI++H +F
Sbjct: 301 SKEAKNLICA-FLTDREVRLGRNGVEEIKRHLFF 333

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  118 bits (298), Expect = 4e-32
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 16/149 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D  +   +++ DFG++K   +  +  +  GTP  +APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLID--QQGYIQVTDFGFAK--RVKGRTWTLCGTPEALAPEIILSKGY 215

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             K  D W+ GV +Y M  G  PF   + P       ++I+S     P +   S + + L
Sbjct: 216 -NKAVDWWALGVLIYEMAAGYPPFFA-DQP---IQIYEKIVSGKVRFPSH--FSSDLKDL 268

Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  119 bits (301), Expect = 5e-32
 Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           + +RDLKLEN +LD  K   +KI DFG  K  +       T  GTP Y+APEVL   +Y 
Sbjct: 270 VVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY- 326

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           G+  D W  GV +Y M+ G  PF +    ++ +   + IL      P    +  E + LL
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYN----QDHEKLFELILMEEIRFPRT--LGPEAKSLL 380

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
           S +   DP++R+        EI +H +F
Sbjct: 381 SGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  121 bits (304), Expect = 7e-32
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 11/147 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + +RDLK  N LLD  +   ++I D G +       +P ++VGT  Y+APEVL +     
Sbjct: 313 VVYRDLKPANILLD--EHGHVRISDLGLACD-FSKKKPHASVGTHGYMAPEVLQKGVAYD 369

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
             AD +S G  L+ +L G  PF      ++     +  L++   +P     S E R LL 
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPFRQ-HKTKDKHEIDRMTLTMAVELPDS--FSPELRSLLE 426

Query: 123 RIFVADPEKRI-----TIPEIQKHPWF 144
            +   D  +R+        E+++ P+F
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFF 453

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  117 bits (294), Expect = 7e-32
 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 11/144 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             + H D+K  N  L      R K+ DFG           +   G P Y+APE+L +  Y
Sbjct: 176 QGLVHLDVKPANIFLG--PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL-QGSY 232

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
               ADV+S G+T+  +         P     ++   Q  L   ++  G    S E R +
Sbjct: 233 GTA-ADVFSLGLTILEVACNMEL---PHGGEGWQQLRQGYLPPEFT-AGL---SSELRSV 284

Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           L  +   DP+ R T   +   P  
Sbjct: 285 LVMMLEPDPKLRATAEALLALPVL 308

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  119 bits (299), Expect = 1e-31
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 19/156 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
           +   HRD+K +N L+D      +++ DFG     +     +S+  VGTP YI+PE+L   
Sbjct: 194 LHYVHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251

Query: 59  EYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGYV- 111
           E      G   D WS GV +Y ML G  PF       +   T  +I++    +  P  V 
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYA----ESLVETYGKIMNHKERFQFPTQVT 307

Query: 112 RVSLECRHLLSRIFVADPEKRIT---IPEIQKHPWF 144
            VS   + L+ R  +   E R+    I + +KHP+F
Sbjct: 308 DVSENAKDLIRR-LICSREHRLGQNGIEDFKKHPFF 342

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  116 bits (293), Expect = 1e-31
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 8/161 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKE 59
            ++ HRD+K  N  +  +    +K+ D G  +  S   +   S VGTP Y++PE +    
Sbjct: 155 RRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPGYVRVSLECR 118
           Y+ K +D+WS G  LY M     PF    D  N  +  ++I    Y  +P     S E R
Sbjct: 213 YNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPS-DHYSEELR 268

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGS 159
            L++     DPEKR  +  +      +       +E     
Sbjct: 269 QLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHHHH 309

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  120 bits (302), Expect = 1e-31
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 15/148 (10%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLSRKEYD 61
           I +RDLKL+N +LD      +KI DFG  K ++       T  GTP YIAPE+++ + Y 
Sbjct: 463 IIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPY- 519

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
           GK  D W+ GV LY ML G  PFE      +     Q I+  + + P    +S E   + 
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEG----EDEDELFQSIMEHNVAYPKS--MSKEAVAIC 573

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
             +    P KR+        +I++H +F
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  114 bits (287), Expect = 7e-31
 Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 27/151 (17%)

Query: 1   MQICHRDLKLENTLLDGSKAP--RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           + I HRD+K EN L   SK P   LK+ DFG                     A E    K
Sbjct: 136 INIAHRDVKPENLLYT-SKRPNAILKLTDFG--------------------FAKETTGEK 174

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RVSLE 116
            YD K  D+WS GV +Y++L G  PF              RI    Y  P      VS E
Sbjct: 175 -YD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 232

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            + L+  +   +P +R+TI E   HPW +++
Sbjct: 233 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  116 bits (292), Expect = 7e-31
 Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 21/158 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
           +   HRD+K +N LLD  +   +++ DFG           +S   VGTP Y++PE+L   
Sbjct: 181 LGYVHRDIKPDNILLD--RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238

Query: 59  EYD------GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS--VHYSIPGY 110
                    G   D W+ GV  Y M  G  PF       +   T  +I+    H S+P  
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA----DSTAETYGKIVHYKEHLSLPLV 294

Query: 111 -VRVSLECRHLLSRIFVADPEKRIT---IPEIQKHPWF 144
              V  E R  + R  +  PE R+      + + HP+F
Sbjct: 295 DEGVPEEARDFIQR-LLCPPETRLGRGGAGDFRTHPFF 331

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  117 bits (294), Expect = 2e-30
 Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 10/147 (6%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+  + Y  
Sbjct: 307 IVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY-T 363

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLS 122
              D W+ G  LY M+ G  PF+  +     +   + +  V          S + R L S
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--FSPQARSLCS 421

Query: 123 RIFVADPEKRI-----TIPEIQKHPWF 144
           ++   DP +R+     +  E+++HP F
Sbjct: 422 QLLCKDPAERLGCRGGSAREVKEHPLF 448

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  116 bits (292), Expect = 2e-30
 Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYD 61
           I +RDLK EN LLD      ++I D G +              GTP ++APE+L  +EY 
Sbjct: 310 IIYRDLKPENVLLD--DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY- 366

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
               D ++ GVTLY M+    PF    +    K   QR+L    + P     S   +   
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFC 424

Query: 122 SRIFVADPEKRI-----TIPEIQKHPWF 144
             +   DPEKR+     +   ++ HP F
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  107 bits (270), Expect = 2e-28
 Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 23/157 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK-------------SSVLHSQPKSTVGTP 47
             + HRDLK  N          +K+ DFG                    +++    VGT 
Sbjct: 137 KGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTK 194

Query: 48  AYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI 107
            Y++PE +    Y  K  D++S G+ L+ +L   YPF    +      T+  + ++ +  
Sbjct: 195 LYMSPEQIHGNSYSHK-VDIFSLGLILFELL---YPFSTQMER---VRTLTDVRNLKFP- 246

Query: 108 PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           P + +       ++  +    P +R     I ++  F
Sbjct: 247 PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  104 bits (262), Expect = 4e-27
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 23/157 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-------------VGTP 47
             + HRDLK  N          +K+ DFG   +     + ++              VGT 
Sbjct: 183 KGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240

Query: 48  AYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI 107
            Y++PE +    Y  K  D++S G+ L+ +L   Y F            I  + ++ +  
Sbjct: 241 LYMSPEQIHGNNYSHK-VDIFSLGLILFELL---YSFSTQM---ERVRIITDVRNLKFP- 292

Query: 108 PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             + +   +   ++  +    P +R    +I ++  F
Sbjct: 293 LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 99.7 bits (249), Expect = 2e-25
 Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 25/184 (13%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + HRDLK  N LL  +    LKICDFG +    + +   +  G+ A++APEV     Y  
Sbjct: 126 LIHRDLKPPNLLLV-AGGTVLKICDFGTAC--DIQTHMTNNKGSAAWMAPEVFEGSNYSE 182

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-----SIPGYVRVSLEC 117
           K  DV+S G+ L+ ++    PF++            RI+   +      +   +   +  
Sbjct: 183 K-CDVFSWGIILWEVITRRKPFDE------IGGPAFRIMWAVHNGTRPPLIKNLPKPI-- 233

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKG-----DENDQSQSI 172
             L++R +  DP +R ++ EI K    + +L   F   DE              D     
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVKI---MTHLMRYFPGADEPLQYPCQHSLPPGEDGRVEP 290

Query: 173 EEIL 176
               
Sbjct: 291 YVDF 294

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 96.7 bits (241), Expect = 5e-24
 Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 13/160 (8%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVL 55
           +I H D+K +N LL  S   R  +CDFG++                   GT  ++APEV+
Sbjct: 170 RILHGDVKADNVLLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVS 114
             K  D K  D+WS    +  ML G +P+          K  I         IP     +
Sbjct: 229 MGKPCDAK-VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK--IASEPPPIREIPP--SCA 283

Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFME 154
                 +      +P  R +  E+++              
Sbjct: 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKS 323

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 97.0 bits (241), Expect = 5e-24
 Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 32/174 (18%)

Query: 1   MQICHRDLKLENTLL---------DGSKAPRLKICDFGYSKSSVLHSQPKSTV-----GT 46
            +I H D+K +N +L         +   +  L + D G S    +   PK T+      T
Sbjct: 191 CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSID--MKLFPKGTIFTAKCET 248

Query: 47  PAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPR----------NFKTT 96
             +   E+LS K ++ +I D +    T+Y ML G Y     E                  
Sbjct: 249 SGFQCVEMLSNKPWNYQI-DYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDM 307

Query: 97  IQRILSVHYSIPGYVRVSL--ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL 148
                 V  +IP    +      R  L ++F      +I      ++   +  L
Sbjct: 308 WNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKI---RALRNRLIVLLL 358

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 94.7 bits (236), Expect = 1e-23
 Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 32/165 (19%)

Query: 1   MQICHRDLKLENTLLD-----------------GSKAPRLKICDFGYSKSSVLHSQPKST 43
           M + H D+K  N  +                   S     KI D G+       S P+  
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR---ISSPQVE 190

Query: 44  VGTPAYIAPEVLS-RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILS 102
            G   ++A EVL     +  K AD+++  +T+           + +           I  
Sbjct: 191 EGDSRFLANEVLQENYTHLPK-ADIFALALTVVCAAGAEPLPRNGDQ-------WHEIRQ 242

Query: 103 VHYS-IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
                IP    +S E   LL  +   DPE+R +   + KH   L 
Sbjct: 243 GRLPRIPQ--VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 95.1 bits (237), Expect = 1e-23
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 12/146 (8%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVL--SRKE 59
           I HRD+K +N L++ + +  LKI DFG SK  + ++   ++  GT  Y+APE++    + 
Sbjct: 143 IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN--FKTTIQRILSVHYSIPGYVRVSLEC 117
           Y    AD+WS G T+  M  G  PF +  +P+   FK  + ++   H  IP    +S E 
Sbjct: 202 YGKA-ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV---HPEIPE--SMSAEA 255

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPW 143
           +  + + F  DP+KR    ++    +
Sbjct: 256 KAFILKCFEPDPDKRACANDLLVDEF 281

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 91.6 bits (228), Expect = 2e-22
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK +N  + G     +KI D G +      S  K+ +GTP ++APE+   K YD 
Sbjct: 152 IIHRDLKCDNIFITGPTG-SVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEEK-YDE 208

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVSLECRHLL 121
              DV++ G+ +  M    YP+ + ++    ++     +     S         E + ++
Sbjct: 209 S-VDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDK--VAIPEVKEII 263

Query: 122 SRIFVADPEKRITIPEIQKHPWF 144
                 + ++R +I ++  H +F
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFF 286

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 90.3 bits (224), Expect = 1e-21
 Identities = 44/183 (24%), Positives = 70/183 (38%), Gaps = 42/183 (22%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
           +I HRD+K  N L++      +K+CDFG S   +  S   S VGT +Y++PE L    Y 
Sbjct: 152 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYS 208

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH-- 119
            + +D+WS G++L  M VG YP   P+          ++       P   R      +  
Sbjct: 209 VQ-SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267

Query: 120 ------------LLSRI-------------------FVA-----DPEKRITIPEIQKHPW 143
                       LL  I                   FV      +P +R  + ++  H +
Sbjct: 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327

Query: 144 FLK 146
             +
Sbjct: 328 IKR 330

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 87.7 bits (218), Expect = 6e-21
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEV----L 55
           + + HRD+K  N L++     ++K+CDFG S   V     K    G   Y+APE     L
Sbjct: 129 LSVIHRDVKPSNVLINALG--QVKMCDFGISGYLV-DDVAKDIDAGCKPYMAPERINPEL 185

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV--RV 113
           ++K Y  K +D+WS G+T+  + +  +P++    P      +     V    P     + 
Sbjct: 186 NQKGYSVK-SDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-----VEEPSPQLPADKF 239

Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
           S E     S+    + ++R T PE+ +HP+F  
Sbjct: 240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 87.4 bits (217), Expect = 7e-21
 Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 23/160 (14%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK 63
           HRD+K +N LL       +K+ DFG+  + +   S+  + VGTP ++APEV++RK Y  K
Sbjct: 139 HRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196

Query: 64  IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSR 123
             D+WS G+    M+ G  P+ + E+P          L   Y I       L+    LS 
Sbjct: 197 -VDIWSLGIMAIEMIEGEPPYLN-ENP----------LRALYLIATNGTPELQNPEKLSA 244

Query: 124 IF--------VADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
           IF          D EKR +  E+ +H +     P+  +  
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 87.8 bits (218), Expect = 7e-21
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 23/164 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
             + HRD+K ++ LL  +   R+K+ DFG+  + S    + KS VGTP ++APEV+SR  
Sbjct: 160 QGVIHRDIKSDSILL--TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSL 217

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y  +  D+WS G+ +  M+ G  P+   + P          +     +       L+  H
Sbjct: 218 YATE-VDIWSLGIMVIEMVDGEPPYFS-DSP----------VQAMKRLRDSPPPKLKNSH 265

Query: 120 LLSRIF--------VADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
            +S +         V DP++R T  E+  HP+ L+    E +  
Sbjct: 266 KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP 309

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 86.6 bits (215), Expect = 9e-21
 Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 22/150 (14%)

Query: 3   ICHRDLKLENTLLDGSKAPR------LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS 56
           I HRDLK  N L+             LKI DFG ++     +   S  G  A++APEV+ 
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE-WHRTTKMSAAGAYAWMAPEVIR 187

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-----SIPGYV 111
              +    +DVWS GV L+ +L G  PF            +     V        IP   
Sbjct: 188 ASMFSKG-SDVWSYGVLLWELLTGEVPFRG-------IDGLAVAYGVAMNKLALPIPSTC 239

Query: 112 RVSLECRHLLSRIFVADPEKRITIPEIQKH 141
                   L+   +  DP  R +   I   
Sbjct: 240 PEPF--AKLMEDCWNPDPHSRPSFTNILDQ 267

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 22/147 (14%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKE 59
           I HR+LK  N L+D      +K+CDFG S+  +  S     KS  GTP ++APEVL  + 
Sbjct: 160 IVHRNLKSPNLLVDKKY--TVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLRDEP 215

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-----SIPGYVRVS 114
            + K +DV+S GV L+ +     P+ +           Q + +V +      IP  +   
Sbjct: 216 SNEK-SDVYSFGVILWELATLQQPWGN-------LNPAQVVAAVGFKCKRLEIPRNLNPQ 267

Query: 115 LECRHLLSRIFVADPEKRITIPEIQKH 141
           +    ++   +  +P KR +   I   
Sbjct: 268 V--AAIIEGCWTNEPWKRPSFATIMDL 292

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 86.1 bits (214), Expect = 2e-20
 Identities = 33/146 (22%), Positives = 52/146 (35%), Gaps = 22/146 (15%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I    L   + ++D       +I       S     Q    +  PA++APE L +K  D 
Sbjct: 134 IPRHALNSRSVMIDEDM--TARISMADVKFSF----QSPGRMYAPAWVAPEALQKKPEDT 187

Query: 63  KI--ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-----SIPGYVRVSL 115
               AD+WS  V L+ ++    PF D        + ++  + V       +IP    +S 
Sbjct: 188 NRRSADMWSFAVLLWELVTREVPFAD-------LSNMEIGMKVALEGLRPTIPPG--ISP 238

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKH 141
               L+      DP KR     I   
Sbjct: 239 HVSKLMKICMNEDPAKRPKFDMIVPI 264

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 85.4 bits (212), Expect = 3e-20
 Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 20/149 (13%)

Query: 3   ICHRDLKLENTLLDG---SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS--R 57
           I HRDL+  N  L     +     K+ DFG S+           +G   ++APE +    
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-----SIPGYVR 112
           + Y  K AD +S  + LY +L G  PF++    +     I+ I  +       +IP    
Sbjct: 203 ESYTEK-ADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIREEGLRPTIPEDCP 256

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKH 141
             L  R+++   +  DP+KR     I K 
Sbjct: 257 PRL--RNVIELCWSGDPKKRPHFSYIVKE 283

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 85.9 bits (213), Expect = 4e-20
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 16/154 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL----- 55
             + HRD+K  N LLD  +  ++K+CDFG S   V       + G  AY+APE +     
Sbjct: 144 HGVIHRDVKPSNILLD--ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP---GYVR 112
           ++ +YD + ADVWS G++L  +  G +P+++ +      T +     +    P   G++ 
Sbjct: 202 TKPDYDIR-ADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-----LQEEPPLLPGHMG 255

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
            S + +  +      D  KR    ++ +H +  +
Sbjct: 256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 85.1 bits (211), Expect = 6e-20
 Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 21/150 (14%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKEYDGK 63
           HRD+K  N LL  S+   +K+ DFG +         ++T VGTP ++APEV+ +  YD K
Sbjct: 142 HRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 199

Query: 64  IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV------RVSLEC 117
            AD+WS G+T   +  G  P  +   P          + V + IP           S   
Sbjct: 200 -ADIWSLGITAIELARGEPPHSE-LHP----------MKVLFLIPKNNPPTLEGNYSKPL 247

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
           +  +      +P  R T  E+ KH + L+N
Sbjct: 248 KEFVEACLNKEPSFRPTAKELLKHKFILRN 277

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 84.7 bits (210), Expect = 9e-20
 Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 23/164 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           M+  HRD+K  N LL  +     K+ DFG + + +   ++  + +GTP ++APEV+    
Sbjct: 144 MRKIHRDIKAGNILL--NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG 201

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+   AD+WS G+T   M  G  P+ D   P          +   + IP     +     
Sbjct: 202 YNCV-ADIWSLGITAIEMAEGKPPYAD-IHP----------MRAIFMIPTNPPPTFRKPE 249

Query: 120 LLSRIF--------VADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
           L S  F        V  PE+R T  ++ +HP+      +  + +
Sbjct: 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRD 293

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 84.7 bits (210), Expect = 9e-20
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 7/150 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL----S 56
           ++I HRD+K  N LLD  ++  +K+CDFG S   V         G   Y+APE +    S
Sbjct: 145 LKIIHRDIKPSNILLD--RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSAS 202

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
           R+ YD + +DVWS G+TLY +  G +P+       +  T + +      S       S  
Sbjct: 203 RQGYDVR-SDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPS 261

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWFLK 146
             + ++     D  KR    E+ KHP+ L 
Sbjct: 262 FINFVNLCLTKDESKRPKYKELLKHPFILM 291

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 83.5 bits (207), Expect = 2e-19
 Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYS------KSSVLHSQPKSTVGTPAYIAPEVLSR- 57
           HRD+K  N LL    +  ++I DFG S           +   K+ VGTP ++APEV+ + 
Sbjct: 144 HRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV 201

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDP-RNFKTTIQ----RILSVHYSIPGYVR 112
           + YD K AD+WS G+T   +  GA P+     P +    T+Q     + +         +
Sbjct: 202 RGYDFK-ADIWSFGITAIELATGAAPYHK-YPPMKVLMLTLQNDPPSLETGVQDKEMLKK 259

Query: 113 VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
                R ++S     DPEKR T  E+ +H +F K    EF++E
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 81.6 bits (202), Expect = 9e-19
 Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 44/172 (25%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL-- 55
           I HRDLK +N L+  +   +  I D G +      ++ L       VGT  Y+APEVL  
Sbjct: 134 IAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191

Query: 56  ----SRKEYDGKIADVWSCGVTLYVMLVGAY----------PFED--PEDP--------- 90
                  +   +  D+W+ G+ L+ +               PF D  P DP         
Sbjct: 192 TIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 250

Query: 91  --RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK 140
                +  I        ++    ++  EC +        +P  R+T   I+K
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWY-------QNPSARLTALRIKK 295

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 26/162 (16%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
             I HRDLK  N  L   +   +KI DFG +          Q +   G+  ++APEV+  
Sbjct: 139 KSIIHRDLKSNNIFLH--EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196

Query: 58  KE---YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV---HYSIPGYV 111
           ++   Y  + +DV++ G+ LY ++ G  P+ +            +I+ +       P   
Sbjct: 197 QDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSN-------INNRDQIIEMVGRGSLSPDLS 248

Query: 112 RVSLEC----RHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           +V   C    + L++       ++R + P I      ++ L 
Sbjct: 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE---IEELA 287

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 80.5 bits (199), Expect = 6e-18
 Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEV-LSRKE 59
           ICHRD+K +N LLD      LK+ DFG +K  +L +   +   + +  Y APE+      
Sbjct: 162 ICHRDIKPQNLLLDPPSG-VLKLIDFGSAK--ILIAGEPNVSYICSRYYRAPELIFGATN 218

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPED-----------PRNFKTTIQRILS--VH 104
           Y   I D+WS G  +  ++ G   +P E   D           P   +  I+ +    + 
Sbjct: 219 YTTNI-DIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS--REQIKTMNPNYME 275

Query: 105 YSIPGYVRVSL----------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +  P                 +   L+SR+    P  R+T  E   HP+F
Sbjct: 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 79.8 bits (197), Expect = 1e-17
 Identities = 48/170 (28%), Positives = 68/170 (40%), Gaps = 34/170 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEV-LSRKE 59
           ICHRD+K +N LLD   A  LK+CDFG +K   L     +   + +  Y APE+     +
Sbjct: 177 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK--QLVRGEPNVSYICSRYYRAPELIFGATD 233

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPED-----------PRNFKTTIQRILS--VH 104
           Y   I DVWS G  L  +L+G   +P +   D           P   +  I+ +      
Sbjct: 234 YTSSI-DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT--REQIREMNPNYTE 290

Query: 105 YSIPGYVRVSL----------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +  P                 E   L SR+    P  R+T  E   H +F
Sbjct: 291 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 34/166 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVLS 56
           I H+DLK +N   D  K   + I DFG         +     + +   G   ++APE++ 
Sbjct: 151 ILHKDLKSKNVFYDNGK---VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207

Query: 57  ---------RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-- 105
                    +  +    +DV++ G   Y +    +PF+        +     I  +    
Sbjct: 208 QLSPDTEEDKLPFSKH-SDVFALGTIWYELHAREWPFKT-------QPAEAIIWQMGTGM 259

Query: 106 --SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
             ++   + +  E   +L   +  + E+R T  ++      L+ LP
Sbjct: 260 KPNLS-QIGMGKEISDILLFCWAFEQEERPTFTKLMDM---LEKLP 301

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 79.0 bits (195), Expect = 2e-17
 Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 30/168 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV-LSRKEYD 61
           ICHRD+K +N L++      LK+CDFG +K  +      + + +  Y APE+ L   EY 
Sbjct: 162 ICHRDIKPQNLLVNSKDN-TLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYT 220

Query: 62  GKIADVWSCGVTLYVMLVGA--YPFEDPED-----------PRNFKTTIQRILSVH--YS 106
             I D+WS G     +++G   +  E   D           P   K  + R+   +    
Sbjct: 221 PSI-DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPT--KEQMIRMNPHYTEVR 277

Query: 107 IPGYVRVSL----------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            P                     LL +I   +P+ RI   E   HP+F
Sbjct: 278 FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 32/166 (19%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL-- 55
           I HRDLK +N L+   K     I D G +      ++ +   P + VGT  Y+ PEVL  
Sbjct: 163 IAHRDLKSKNILVK--KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220

Query: 56  ----SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED---------PRNFKTTIQRILS 102
               +  +     AD++S G+ L+ +          E+         P +      R + 
Sbjct: 221 SLNRNHFQSYIM-ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIV 279

Query: 103 VHY----SIPGYVRVSLECRHLLSRIFV----ADPEKRITIPEIQK 140
                  S P     S EC   + ++       +P  R+T   ++K
Sbjct: 280 CIKKLRPSFPNRWS-SDECLRQMGKLMTECWAHNPASRLTALRVKK 324

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 77.5 bits (191), Expect = 5e-17
 Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 44/172 (25%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL-- 55
           I HRDLK +N L+   K     I D G +      +  +   P   VGT  Y+APEVL  
Sbjct: 168 IAHRDLKSKNILVK--KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 225

Query: 56  ----SRKEYDGKIADVWSCGVTLYVMLVG----------AYPFED--PEDP--------- 90
                  E   + AD+++ G+  + +               P+ D  P DP         
Sbjct: 226 SINMKHFESFKR-ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 284

Query: 91  --RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK 140
             +  +  I        ++    ++  EC +       A+   R+T   I+K
Sbjct: 285 CEQKLRPNIPNRWQSCEALRVMAKIMRECWY-------ANGAARLTALRIKK 329

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 77.8 bits (192), Expect = 5e-17
 Identities = 49/208 (23%), Positives = 65/208 (31%), Gaps = 63/208 (30%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
           + I H DLK EN LL   K   +KI DFG   SS    Q     + +  Y +PEVL    
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGMP 234

Query: 60  YDGKIADVWSCGVTLYVMLVG--------------------------------------- 80
           YD  I D+WS G  L  M  G                                       
Sbjct: 235 YDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFE 293

Query: 81  -----AYPFEDPEDPRN-----FKTTIQRILSVHYSIPGYVRVSLECR---------HLL 121
                 +  +  +D +          +  IL V    PG  R                L+
Sbjct: 294 KLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI 353

Query: 122 SRIFVADPEKRITIPEIQKHPWFLKNLP 149
            R+   DP+ RI      +H +F K   
Sbjct: 354 LRMLDYDPKTRIQPYYALQHSFFKKTAD 381

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 76.9 bits (190), Expect = 5e-17
 Identities = 41/174 (23%), Positives = 60/174 (34%), Gaps = 37/174 (21%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEV-LSR 57
           + HRDLK  N  ++ ++   LKI DFG ++    H   K      + T  Y +P + LS 
Sbjct: 141 VLHRDLKPANLFIN-TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP 199

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFE------------------DPEDPRNFKTTIQR 99
             Y   I D+W+ G     ML G   F                     ED +   + I  
Sbjct: 200 NNYTKAI-DMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPV 258

Query: 100 ILSVHYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +    +        L         E    L +I    P  R+T  E   HP+ 
Sbjct: 259 YIR---NDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 76.6 bits (189), Expect = 8e-17
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 32/171 (18%)

Query: 1   MQICHRDLKLENTLL--DGSKAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEV--- 54
            +I HRDLK  N L+  +G     +++ DFG S K+     +  S +GTP ++APEV   
Sbjct: 136 KRIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191

Query: 55  --LSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR 112
             +    YD K AD+WS G+TL  M     P  +  +P          + V   I     
Sbjct: 192 ETMKDTPYDYK-ADIWSLGITLIEMAQIEPPHHE-LNP----------MRVLLKIAKSDP 239

Query: 113 VSLECRHLLSRIF--------VADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
            +L      S  F          +PE R +  ++ +HP+       + + E
Sbjct: 240 PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRE 290

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 76.9 bits (190), Expect = 9e-17
 Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 41/175 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV-LSRKEYD 61
           +CHRD+K  N L++ +    LK+CDFG +K         + + +  Y APE+    + Y 
Sbjct: 152 VCHRDIKPHNVLVNEADG-TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYT 210

Query: 62  GKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRILSV---------HYSIPGY 110
             + D+WS G     M++G   +  ++          +  I+ V             P +
Sbjct: 211 TAV-DIWSVGCIFAEMMLGEPIFRGDNSAG------QLHEIVRVLGCPSREVLRKLNPSH 263

Query: 111 VRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             V L                     E   LLS +    PE+R+   E   HP+F
Sbjct: 264 TDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 76.3 bits (188), Expect = 1e-16
 Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 34/189 (17%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
            ++ HRD+K +N LL  ++   +K+ DFG S         ++T +GTP ++APEV++  E
Sbjct: 148 HKVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 205

Query: 60  -----YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGY---- 110
                YD K +D+WS G+T   M  GA P  D   P          +   + IP      
Sbjct: 206 NPDATYDFK-SDLWSLGITAIEMAEGAPPLCD-MHP----------MRALFLIPRNPAPR 253

Query: 111 ---VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP------IEFMEEDEGSMQ 161
               + S + +  +    V +  +R    ++ KHP F+++ P      I+  +  + + +
Sbjct: 254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP-FIRDQPNERQVRIQLKDHIDRTKK 312

Query: 162 KGDENDQSQ 170
           K  E D+++
Sbjct: 313 KRGEKDETE 321

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 49/209 (23%), Positives = 64/209 (30%), Gaps = 58/209 (27%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
            +I H DLK EN LL       +K+ DFG   SS    Q   T + +  Y APEV+    
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTYIQSRFYRAPEVILGAR 275

Query: 60  YDGKIADVWSCGVTLY---------------------VMLVGAYP-------------FE 85
           Y   I D+WS G  L                      + L+G                  
Sbjct: 276 YGMPI-DMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334

Query: 86  DPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC-------------------RHLLSRIFV 126
               PR    T     SV  +     R  L                        L +   
Sbjct: 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394

Query: 127 ADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
            DP  R+T  +  +HPW  + LP     E
Sbjct: 395 WDPAVRMTPGQALRHPWLRRRLPKPPTGE 423

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 76.1 bits (187), Expect = 2e-16
 Identities = 42/238 (17%), Positives = 78/238 (32%), Gaps = 57/238 (23%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYS--------KSSVLHSQPKSTVGTPAYIAPEVLS 56
           HR +K  + L+       + +     +        +  V+H  PK +V    +++PEVL 
Sbjct: 151 HRSVKASHILISVDGK--VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ 208

Query: 57  R--KEYDGKIADVWSCGVTLYVMLVGAYPFED---------------------------- 86
           +  + YD K +D++S G+T   +  G  PF+D                            
Sbjct: 209 QNLQGYDAK-SDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 267

Query: 87  ------------PEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT 134
                               +T +       S P +   S    H + +    +P+ R +
Sbjct: 268 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327

Query: 135 IPEIQKHPWF--LKNLPIEFMEE--DEGSMQKGDENDQSQSIEEILGIIQEARKPGEG 188
              +  H +F  +K    E + E     +     E  QSQ    I G++    +    
Sbjct: 328 ASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFGLVTNLEELEVD 385

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 34/171 (19%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV-LSRKEYD 61
           + HRDL   N LL  +    + ICDF  ++     +     V    Y APE+ +  K + 
Sbjct: 155 VVHRDLHPGNILLADN--NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT 212

Query: 62  GKIADVWSCGVTLYVMLVGA--YPFEDPED-----------PRNFKTTIQRILS------ 102
             + D+WS G  +  M      +      +           P+     +    S      
Sbjct: 213 KLV-DMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK--IEDVVMFSSPSARDY 269

Query: 103 VHYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           +  S+      +              L++++   +P++RI+  +  +HP+F
Sbjct: 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 39/179 (21%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL-SR 57
           M I HRD+K  N ++D     +L++ D+G ++    H   +    V +  +  PE+L   
Sbjct: 149 MGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFY--HPGQEYNVRVASRYFKGPELLVDY 205

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPF------------------EDPEDPRNFKTTIQR 99
           + YD  + D+WS G  L  M+    PF                   +       K  I+ 
Sbjct: 206 QMYDYSL-DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 264

Query: 100 ILSVHYSIPGYVR--------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               +  +  + R              VS E    L ++   D + R+T  E  +HP+F
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 75.0 bits (185), Expect = 4e-16
 Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 35/170 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEV-LSRKE 59
           + HRDLK  N  ++      LKI DFG ++ +      + T  V T  Y APEV LS   
Sbjct: 147 VVHRDLKPGNLAVNED--CELKILDFGLARHA----DAEMTGYVVTRWYRAPEVILSWMH 200

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPED------------PRNFKTTIQRILSVHY 105
           Y+  + D+WS G  +  ML G   +  +D  D               F   +    +  Y
Sbjct: 201 YNQTV-DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY 259

Query: 106 --SIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
             S+P   R            +   LL ++   D +KR+T  +   HP+F
Sbjct: 260 IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 75.7 bits (186), Expect = 4e-16
 Identities = 29/136 (21%), Positives = 45/136 (33%), Gaps = 32/136 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           + + DLK EN +L      +LK+ D G        +      GTP + APE++       
Sbjct: 203 LVYNDLKPENIMLTEE---QLKLIDLGAVSR---INSFGYLYGTPGFQAPEIVRTGPTVA 256

Query: 63  KIADVWSCGVTLYVMLVGAYPFED------PEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
              D+++ G TL  + +             PED                      +    
Sbjct: 257 --TDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVL------------------KTYDS 296

Query: 117 CRHLLSRIFVADPEKR 132
              LL R    DP +R
Sbjct: 297 YGRLLRRAIDPDPRQR 312

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 74.4 bits (183), Expect = 6e-16
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 42/170 (24%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLS--- 56
           I HRD+K +N LL  +      I DFG +           T   VGT  Y+APEVL    
Sbjct: 152 ISHRDIKSKNVLLKNNLTA--CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI 209

Query: 57  --RKEYDGKIADVWSCGVTL---------YVMLVGAY--PFED--PEDP----------- 90
             +++   +  D+++ G+ L             V  Y  PFE+   + P           
Sbjct: 210 NFQRDAFLR-IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVH 268

Query: 91  RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK 140
           +  +  ++     H  +        EC          D E R++   + +
Sbjct: 269 KKKRPVLRDYWQKHAGMAMLCETIEECWD-------HDAEARLSAGCVGE 311

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 74.3 bits (183), Expect = 8e-16
 Identities = 46/181 (25%), Positives = 70/181 (38%), Gaps = 45/181 (24%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y  
Sbjct: 148 IIHRDLKPSNIVVKSD--CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205

Query: 63  KIADVWSCGVTLYVMLVGAYPFE------------------DPEDPRNFKTTIQRILSVH 104
            + D+WS G  +  M+ G   F                    PE  +  + T++  +   
Sbjct: 206 NV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE-- 262

Query: 105 YSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
            + P Y   S                      + R LLS++ V D  KRI++ E  +HP+
Sbjct: 263 -NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321

Query: 144 F 144
            
Sbjct: 322 I 322

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 74.0 bits (182), Expect = 1e-15
 Identities = 46/229 (20%), Positives = 75/229 (32%), Gaps = 57/229 (24%)

Query: 2   QICHRDLKLENTLLDGSKAPR----LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR 57
            I H D+K EN L++   +P     +KI D G   +        +++ T  Y +PEVL  
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDEHYTNSIQTREYRSPEVLLG 209

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTT-----IQRIL----------- 101
             +     D+WS    ++ ++ G + FE  E     K       I  +L           
Sbjct: 210 APWGCGA-DIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 268

Query: 102 ----------------------SVHYSIPGYVRVS----LECRHLLSRIFVADPEKRITI 135
                                  +   +    + S     E    LS +   DP KR   
Sbjct: 269 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328

Query: 136 PEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARK 184
             +  HPW    L +E +           + +   S  +I G  +E R 
Sbjct: 329 GGLVNHPWLKDTLGMEEIRV--------PDRELYGSGSDIPGWFEEVRD 369

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 73.1 bits (180), Expect = 1e-15
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---------------SSVLHSQPKSTVG 45
           M I HRDL   N L+  +K   + + DFG ++                     +  + VG
Sbjct: 127 MNIIHRDLNSHNCLVRENK--NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184

Query: 46  TPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY 105
            P ++APE+++ + YD K  DV+S G+ L  ++       D   PR     +     +  
Sbjct: 185 NPYWMAPEMINGRSYDEK-VDVFSFGIVLCEIIGRVNADPDY-LPRTMDFGLNVRGFLDR 242

Query: 106 SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK 140
             P     S     +  R    DPEKR +  +++ 
Sbjct: 243 YCPPNCPPSF--FPITVRCCDLDPEKRPSFVKLEH 275

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 39/172 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEV-LSRKE 59
           I HRDLK  N  ++      LKI DFG ++ +      + T  V T  Y APE+ L+   
Sbjct: 153 IIHRDLKPSNLAVNED--CELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLNWMH 206

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPED-----------PRNFKTTIQRILSVHY- 105
           Y+  + D+WS G  +  +L G   +P  D  D           P      +++I S    
Sbjct: 207 YNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG--AELLKKISSESAR 263

Query: 106 ----SIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
               S+    +++              LL ++ V D +KRIT  +   H +F
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 35/170 (20%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEV-LSRKE 59
           I HRDLK  N  ++      LKI DFG ++     +  + T  V T  Y APEV L+   
Sbjct: 149 IIHRDLKPGNLAVNED--CELKILDFGLARQ----ADSEMTGYVVTRWYRAPEVILNWMR 202

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPED------------PRNFKTTIQRILSVHY 105
           Y   + D+WS G  +  M+ G   +   D  D            P  F   +Q   + +Y
Sbjct: 203 YTQTV-DIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 261

Query: 106 --SIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
              +P   +               +LL ++ V D E+R+T  E   HP+F
Sbjct: 262 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 71.9 bits (177), Expect = 3e-15
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG--YSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
               HRD+K EN L+  S      + DFG   + +    +Q  +TVGT  Y+APE  S  
Sbjct: 153 AGATHRDVKPENILV--SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSES 210

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFE 85
               + AD+++    LY  L G+ P++
Sbjct: 211 HATYR-ADIYALTCVLYECLTGSPPYQ 236

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 72.1 bits (177), Expect = 4e-15
 Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 29/166 (17%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS---R 57
             + HRD+K  N LL  S+   +K+ DFG +      +   S VGTP ++APEV+     
Sbjct: 173 HNMIHRDVKAGNILL--SEPGLVKLGDFGSASI---MAPANSFVGTPYWMAPEVILAMDE 227

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +YDGK  DVWS G+T   +     P  +  +           +S  Y I      +L+ 
Sbjct: 228 GQYDGK-VDVWSLGITCIELAERKPPLFN-MNA----------MSALYHIAQNESPALQS 275

Query: 118 RHLLSRIF--------VADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
            H  S  F           P+ R T   + KH + L+  P   + +
Sbjct: 276 GH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD 320

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 71.5 bits (176), Expect = 6e-15
 Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 43/177 (24%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEV-LSR 57
           + HRDLK  N LL+ +    LKICDFG ++ +             V T  Y APE+ L+ 
Sbjct: 149 VLHRDLKPSNLLLNTT--CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDP-RNFKTTIQRILSV------------- 103
           K Y   I D+WS G  L  ML     F     P +++   +  IL +             
Sbjct: 207 KGYTKSI-DIWSVGCILAEMLSNRPIF-----PGKHYLDQLNHILGILGSPSQEDLNCII 260

Query: 104 -----HY--SIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                +Y  S+P   +V           +   LL ++   +P KRI + +   HP+ 
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           M+I HRD+K +N L+D +K   LKI DFG +K  S    +Q    +GT  Y +PE    +
Sbjct: 130 MRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFE 85
             D    D++S G+ LY MLVG  PF 
Sbjct: 188 ATDEC-TDIYSIGIVLYEMLVGEPPFN 213

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 70.3 bits (172), Expect = 2e-14
 Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 49/183 (26%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           I HRDLK  N ++       LKI DFG +++    +    T  V T  Y APEV+    Y
Sbjct: 185 IIHRDLKPSNIVVKSD--CTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 240

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFE------------------DPEDPRNFKTTIQRILS 102
              + D+WS G  +  M+     F                    PE  +  + T++  + 
Sbjct: 241 KENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 299

Query: 103 VHYSIPGYVRVSL---------------------ECRHLLSRIFVADPEKRITIPEIQKH 141
              + P Y  ++                      + R LLS++ V DP KRI++ +  +H
Sbjct: 300 ---NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356

Query: 142 PWF 144
           P+ 
Sbjct: 357 PYI 359

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 43/181 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKST-------VGTPAYIA 51
           + HRDLK  N L++ +    LK+CDFG      +S+  +S+P          V T  Y A
Sbjct: 133 VIHRDLKPSNLLINSN--CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190

Query: 52  PEV-LSRKEYDGKIADVWSCGVTLYVMLVGA--YPFEDPED-----------PRNFKTTI 97
           PEV L+  +Y   + DVWSCG  L  + +    +P  D              P +    +
Sbjct: 191 PEVMLTSAKYSRAM-DVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS-DNDL 248

Query: 98  QRILSVHY-----SIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPW 143
           + I S        S+P Y    L         +   LL R+ V DP KRIT  E  +HP+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308

Query: 144 F 144
            
Sbjct: 309 L 309

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 69.2 bits (170), Expect = 4e-14
 Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 31/188 (16%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSR-KEY 60
           I HRD+K EN L+  S    +K+CDFG++++     +     V T  Y APE+L    +Y
Sbjct: 145 IIHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202

Query: 61  DGKIADVWSCGVTLYVMLVGA--YPFEDPED--PRNFK---TTIQRILSVHYSIPGYVRV 113
              + DVW+ G  +  M +G   +P +   D            I R   +    P +  V
Sbjct: 203 GKAV-DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261

Query: 114 SL------------------ECRHLLSRIFVADPEKRITIPEIQKHPWFLK-NLPIEFME 154
            L                      L  +    DP+KR    E+  H +F        F +
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQ 321

Query: 155 EDEGSMQK 162
           E +  +QK
Sbjct: 322 ELQLKVQK 329

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 68.8 bits (169), Expect = 5e-14
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 21/115 (18%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLS 56
             I HRD+K  N ++  S    +K+ DFG     + S    +Q  + +GT  Y++PE   
Sbjct: 135 NGIIHRDVKPANIMI--SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPF--------------EDPEDPRNFKTTI 97
               D + +DV+S G  LY +L G  PF              EDP  P      +
Sbjct: 193 GDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 68.0 bits (167), Expect = 9e-14
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 42/181 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKEY 60
           I HRDLK +N L++     +LK+ DFG +++  +     S+ V T  Y AP+VL   + Y
Sbjct: 129 ILHRDLKPQNLLINKRG--QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186

Query: 61  DGKIADVWSCGVTLYVML--------------------------------VGAYPFEDPE 88
              I D+WSCG  L  M+                                V   P  +P 
Sbjct: 187 STSI-DIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN 245

Query: 89  DPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL 148
             +     ++++L  H        +       L  +   +P+ R++  +   HPWF    
Sbjct: 246 IQQRPPRDLRQVLQPHTK----EPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF-AEY 300

Query: 149 P 149
            
Sbjct: 301 Y 301

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 67.6 bits (165), Expect = 1e-13
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---------SSVLHSQPKSTVGTPAYIA 51
             I HRDL   N L+         I DFG S               +   S VGT  Y+A
Sbjct: 139 PAISHRDLNSRNVLVKNDG--TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196

Query: 52  PEVL------SRKEYDGKIADVWSCGVTLYVML---VGAYPFEDPEDPRNFKTTIQRILS 102
           PEVL         E   K  D+++ G+  + +       +P E   +             
Sbjct: 197 PEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE------------- 243

Query: 103 VHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPE-IQKHPWFLKNLPIEFMEE 155
             Y +     V         ++ V+  ++R   PE  +++   +++L  E +E+
Sbjct: 244 --YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSL-KETIED 294

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 66.4 bits (163), Expect = 3e-13
 Identities = 39/177 (22%), Positives = 60/177 (33%), Gaps = 42/177 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLSRKE 59
           I HRDLK EN L+       +K+ DFG ++    +S        V T  Y APEVL +  
Sbjct: 141 IVHRDLKPENILVTSGG--TVKLADFGLARI---YSYQMALTPVVVTLWYRAPEVLLQST 195

Query: 60  YDGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRILSV-------------- 103
           Y   + D+WS G     M      +      D       + +I  +              
Sbjct: 196 YATPV-DMWSVGCIFAEMFRRKPLFCGNSEAD------QLGKIFDLIGLPPEDDWPRDVS 248

Query: 104 --HYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
               + P      +             LL  +   +P KRI+     +H +  K+  
Sbjct: 249 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 305

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 66.5 bits (163), Expect = 4e-13
 Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 43/184 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPR---LKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SR 57
             HRDLK +N LL  S A     LKI DFG +++  +  +  +  + T  Y  PE+L   
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212

Query: 58  KEYDGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRILSV-----------H 104
           + Y   + D+WS       ML+    +P +   D       + +I  V            
Sbjct: 213 RHYSTSV-DIWSIACIWAEMLMKTPLFPGDSEID------QLFKIFEVLGLPDDTTWPGV 265

Query: 105 YSIPGYV-----------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
            ++P +                   +  E   LL+ +   DP KRI+     +HP+F  +
Sbjct: 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF-SH 324

Query: 148 LPIE 151
              +
Sbjct: 325 NDFD 328

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 65.6 bits (161), Expect = 5e-13
 Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 42/179 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKEY 60
           + HRDLK +N L++ +    LK+ +FG +++  +  +  S  V T  Y  P+VL   K Y
Sbjct: 122 VLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179

Query: 61  DGKIADVWSCGVTLYVMLVGAYPF---EDPEDPRNFKTTIQRILSV-----------HYS 106
              I D+WS G     +     P     D +D       ++RI  +              
Sbjct: 180 STSI-DMWSAGCIFAELANAGRPLFPGNDVDD------QLKRIFRLLGTPTEEQWPSMTK 232

Query: 107 IPGYV----------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           +P Y                 +++   R LL  +   +P +RI+  E  +HP+F  +  
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF-SDFC 290

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 41/205 (20%), Positives = 66/205 (32%), Gaps = 60/205 (29%)

Query: 1   MQICHRDLKLENTLLDGS-----------------KAPRLKICDFGYSKSSVLHSQPKST 43
            Q+ H DLK EN L   S                 K   +++ DFG   S+    +  +T
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATFDHEHHTT 198

Query: 44  -VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA--YPFED-------------- 86
            V T  Y  PEV+    +     DVWS G  L+    G   +   +              
Sbjct: 199 IVATRHYRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 257

Query: 87  ----------------------PEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRI 124
                                  E+  + +   +    +   +       ++   L+ R+
Sbjct: 258 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRM 317

Query: 125 FVADPEKRITIPEIQKHPWFLKNLP 149
              DP +RIT+ E   HP+F    P
Sbjct: 318 LEFDPAQRITLAEALLHPFFAGLTP 342

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 65.3 bits (160), Expect = 7e-13
 Identities = 42/176 (23%), Positives = 65/176 (36%), Gaps = 41/176 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEY 60
           + HRDLK +N L+  S   ++K+ DFG ++      Q   T  V T  Y APEVL +  Y
Sbjct: 141 VVHRDLKPQNILVTSSG--QIKLADFGLARI--YSFQMALTSVVVTLWYRAPEVLLQSSY 196

Query: 61  DGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRILSV--------------- 103
              + D+WS G     M      +      D       + +IL V               
Sbjct: 197 ATPV-DLWSVGCIFAEMFRRKPLFRGSSDVD------QLGKILDVIGLPGEEDWPRDVAL 249

Query: 104 -HYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
              +        +           + LL +    +P KRI+      HP+F ++L 
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF-QDLE 304

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 65.3 bits (160), Expect = 8e-13
 Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 40/179 (22%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKE 59
           ++ HRDLK +N L++      LK+ DFG +++  + ++     V T  Y  P++L    +
Sbjct: 120 KVLHRDLKPQNLLINERGE--LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177

Query: 60  YDGKIADVWSCGVTLYVMLVGA--------------------YPFED--------PE-DP 90
           Y  +I D+W  G   Y M  G                      P E+         E   
Sbjct: 178 YSTQI-DMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236

Query: 91  RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
            N+       L  H       R+  +   LL+++   +   RI+  +  KHP+F  +L 
Sbjct: 237 YNYPKYRAEALLSHAP-----RLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF-LSLG 289

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 64.8 bits (159), Expect = 9e-13
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 40/173 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKEY 60
           + HRDLK +N L++      LKI DFG +++  +  +  +  + T  Y AP+VL   K+Y
Sbjct: 121 VLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178

Query: 61  DGKIADVWSCGVTLYVMLVGA--YPFEDPEDPRNFKTTIQRILSV--------------- 103
              I D+WS G     M+ G   +P     D       + RI  +               
Sbjct: 179 STTI-DIWSVGCIFAEMVNGTPLFPGVSEAD------QLMRIFRILGTPNSKNWPNVTEL 231

Query: 104 ---HYSIPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                +   Y  +               LLS++   DP +RIT  +  +H +F
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 40/178 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKEY 60
           I HRDLK +N L++      LK+ DFG +++  +  +  +  V T  Y AP+VL   K+Y
Sbjct: 140 ILHRDLKPQNLLINSDG--ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197

Query: 61  DGKIADVWSCGVTLYVMLVGA--------------------YPFED--PE-------DPR 91
              + D+WS G     M+ G                      P     P+         R
Sbjct: 198 STSV-DIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256

Query: 92  NFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
            F+   ++  S             E   LLS +   DP KRI+  +   HP+F K+L 
Sbjct: 257 TFQVFEKKPWSSIIP-----GFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF-KDLD 308

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 45/200 (22%), Positives = 64/200 (32%), Gaps = 60/200 (30%)

Query: 1   MQICHRDLKLENTLLDGS-----------------KAPRLKICDFGYSKSSVLHSQPKST 43
            ++ H DLK EN L   S                   P +K+ DFG   S+    +  ST
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SATYDDEHHST 193

Query: 44  -VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY---------------------VMLVGA 81
            V T  Y APEV+    +     DVWS G  L                        ++G 
Sbjct: 194 LVSTRHYRAPEVILALGWSQPC-DVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252

Query: 82  YP------------FED-----PEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRI 124
            P            F        E     +   +    +   +            L+ ++
Sbjct: 253 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKM 312

Query: 125 FVADPEKRITIPEIQKHPWF 144
              DP KRIT+ E  KHP+F
Sbjct: 313 LEYDPAKRITLREALKHPFF 332

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 42/189 (22%), Positives = 63/189 (33%), Gaps = 61/189 (32%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-T--VGTPAYIAPEVL-SRK 58
             HRD+K EN L+       +K+CDFG+++   L          V T  Y +PE+L    
Sbjct: 123 CIHRDVKPENILITKHS--VIKLCDFGFARL--LTGPSDYYDDEVATRWYRSPELLVGDT 178

Query: 59  EYDGKIADVWSCGVTLYVMLVG-------------------------------------- 80
           +Y   + DVW+ G     +L G                                      
Sbjct: 179 QYGPPV-DVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237

Query: 81  AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK 140
                DPED    +     I             S     LL      DP +R+T  ++  
Sbjct: 238 GVKIPDPEDMEPLELKFPNI-------------SYPALGLLKGCLHMDPTERLTCEQLLH 284

Query: 141 HPWFLKNLP 149
           HP+F +N+ 
Sbjct: 285 HPYF-ENIR 292

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 62.9 bits (153), Expect = 7e-12
 Identities = 42/195 (21%), Positives = 63/195 (32%), Gaps = 50/195 (25%)

Query: 3   ICHRDLKLENTLLDGSKAPR--LKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVL- 55
           + HRDLK  N L+ G    R  +KI D G    ++      +     V T  Y APE+L 
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208

Query: 56  SRKEYDGKIADVWSCGVTLYVML------------------------------------- 78
             + Y   I D+W+ G     +L                                     
Sbjct: 209 GARHYTKAI-DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK 267

Query: 79  ----VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT 134
               +   P          + T      + Y     V+   +  HLL ++   DP KRIT
Sbjct: 268 DWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 327

Query: 135 IPEIQKHPWFLKNLP 149
             +  + P+F    P
Sbjct: 328 SEQAMQDPYF-LEDP 341

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 62.0 bits (151), Expect = 1e-11
 Identities = 43/208 (20%), Positives = 67/208 (32%), Gaps = 68/208 (32%)

Query: 1   MQICHRDLKLENTLLDGS-----------------------KAPRLKICDFGYSKSSVLH 37
           M + H DLK EN LLD                         K+  +K+ DFG    +   
Sbjct: 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG---CATFK 212

Query: 38  SQPKST-VGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY--------------------- 75
           S    + + T  Y APEV+    +D    D+WS G  L                      
Sbjct: 213 SDYHGSIINTRQYRAPEVILNLGWDVSS-DMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271

Query: 76  VMLVGAYP--------------FEDPEDPR----NFKTTIQRILSVHYSIPGYVRVSLEC 117
             ++   P              + + ++ +       ++I  I  V   +P Y  +  E 
Sbjct: 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331

Query: 118 -RHLLSRIFVADPEKRITIPEIQKHPWF 144
               L  I   DP  R +  E+ KH + 
Sbjct: 332 FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 67/206 (32%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST------------------- 43
           + HRD+K  N LL+      +K+ DFG S+S V   +  +                    
Sbjct: 130 LLHRDMKPSNILLNAE--CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187

Query: 44  ---VGTPAYIAPEV-LSRKEYDGKIADVWSCGVTLYVMLVG------------------- 80
              V T  Y APE+ L   +Y   I D+WS G  L  +L G                   
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGI-DMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246

Query: 81  ----------------------AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
                                 +   +      N +    +  ++   I      + E  
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEAL 306

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWF 144
            LL ++   +P KRI+  +  KHP+ 
Sbjct: 307 DLLDKLLQFNPNKRISANDALKHPFV 332

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 42/178 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL-SRKEY 60
           I HRDLK  N LLD +    LK+ DFG +KS    ++  +  V T  Y APE+L   + Y
Sbjct: 133 ILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY 190

Query: 61  DGKIADVWSCGVTLYVMLVGAYPF---EDPEDPRNFKTTIQRILSV-----------HYS 106
              + D+W+ G  L  +L+   PF   +   D       + RI                S
Sbjct: 191 GVGV-DMWAVGCILAELLLRV-PFLPGDSDLD------QLTRIFETLGTPTEEQWPDMCS 242

Query: 107 IPGYV---------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
           +P YV                   +   L+  +F+ +P  RIT  +  K  +F  N P
Sbjct: 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF-SNRP 299

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 40/219 (18%), Positives = 65/219 (29%), Gaps = 80/219 (36%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPA-------------- 48
           I HRDLK  N LL+      +K+CDFG +++                             
Sbjct: 150 IIHRDLKPANCLLNQD--CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207

Query: 49  ---------YIAPEV-LSRKEYDGKIADVWSCGVTLYVMLVG------------------ 80
                    Y APE+ L ++ Y   I D+WS G     +L                    
Sbjct: 208 LTSHVVTRWYRAPELILLQENYTKSI-DIWSTGCIFAELLNMLQSHINDPTNRFPLFPGS 266

Query: 81  ------AYPFEDPEDPRNFKTTIQRILSV------------------HY--SIPGYVRVS 114
                           ++ +  +  I ++                   Y    P    ++
Sbjct: 267 SCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN 326

Query: 115 L---------ECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           L         +  +LL  +   +P KRITI +   HP+ 
Sbjct: 327 LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 41/177 (23%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFG----YSKSSVLHSQP-KSTVGTPAYIAPEVL-S 56
           I HRD+K  N L+       LK+ DFG    +S +         + V T  Y  PE+L  
Sbjct: 145 ILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG 202

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGA--------------------YPFED--PE------ 88
            ++Y   I D+W  G  +  M   +                        +  P       
Sbjct: 203 ERDYGPPI-DLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYEL 261

Query: 89  -DPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +        +R +                  L+ ++ V DP +RI   +   H +F
Sbjct: 262 YEKLELVKGQKRKVKDRLK---AYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 54.5 bits (131), Expect = 5e-09
 Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 47/170 (27%)

Query: 18  SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM 77
           ++  ++KI D G   +  +H      + T  Y + EVL    Y+   AD+WS     + +
Sbjct: 230 AEKLKVKIADLG--NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP-ADIWSTACMAFEL 286

Query: 78  LVGAYPFEDPEDPRNFKTT------IQRIL-------------SVHY--------SIPGY 110
             G Y F +P     +         I  +L             S  +         I   
Sbjct: 287 ATGDYLF-EPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345

Query: 111 VRVSLE----------------CRHLLSRIFVADPEKRITIPEIQKHPWF 144
               L                     L  +    PEKR T  E  +HPW 
Sbjct: 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 54.1 bits (130), Expect = 7e-09
 Identities = 53/283 (18%), Positives = 83/283 (29%), Gaps = 100/283 (35%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPA-------------- 48
           I HRDLK  N L++  +   +K+CDFG +++        S +                  
Sbjct: 177 ILHRDLKPANCLVN--QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK 234

Query: 49  --------------YIAPEV-LSRKEYDGKIADVWSCG---------------------- 71
                         Y APE+ L ++ Y   I DVWS G                      
Sbjct: 235 NLKRQLTGHVVTRWYRAPELILLQENYTEAI-DVWSIGCIFAELLNMIKENVAYHADRGP 293

Query: 72  -----VTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV------------------HY--S 106
                    +        +     R  +  +  I ++                   Y   
Sbjct: 294 LFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI 353

Query: 107 IPGYVRVSL---------ECRHLLSRIFVADPEKRITIPEIQKHPWFLK----------N 147
            P      L         +  HLL R+ V +P KRITI E   HP+F +           
Sbjct: 354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNAT 413

Query: 148 LPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPK 190
             +     D  +M +     +   ++EI     E + P   P 
Sbjct: 414 EKVRLPFNDWMNMDE--PQLRYAFVKEIQRYHPEIQLPRRSPN 454

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 52.9 bits (128), Expect = 2e-08
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 13/97 (13%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLSRK 58
              HRD+K  N LLD +     KI DFG ++ S        ++  VGT AY+APE L   
Sbjct: 153 HHIHRDIKSANILLDEAFTA--KISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-- 208

Query: 59  EYDGKI---ADVWSCGVTLYVMLVGAYPFEDPEDPRN 92
              G+I   +D++S GV L  ++ G    ++  +P+ 
Sbjct: 209 ---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 17/80 (21%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLSR 57
           I HRD+K  N LLD        + DFG +K   L     + V     GT  +IAPE LS 
Sbjct: 155 IIHRDVKAANILLDEEFEA--VVGDFGLAK---LMDYKDTHVTTAVRGTIGHIAPEYLST 209

Query: 58  KEYDGKI---ADVWSCGVTL 74
               GK     DV+  GV L
Sbjct: 210 ----GKSSEKTDVFGYGVML 225

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 17/98 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK-STV--GTPAYIAPE-----V 54
           I HRD+K  N LLD +  P  KI DFG SK      Q   STV  GT  YI PE      
Sbjct: 160 IIHRDVKSINILLDENFVP--KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGR 217

Query: 55  LSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN 92
           L+ K      +DV+S GV L+ +L           PR 
Sbjct: 218 LTEK------SDVYSFGVVLFEVLCARSAI-VQSLPRE 248

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 17/134 (12%), Positives = 35/134 (26%), Gaps = 36/134 (26%)

Query: 3   ICHRDLKLENTLL--DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           +           +  DG     +                    +  PA +          
Sbjct: 150 VALSIDHPSRVRVSIDG----DVV-------------------LAYPATMPDA------- 179

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR--VSLECR 118
                D+   G +LY +LV  +P  +    R+     +R  +     P  +   +  +  
Sbjct: 180 -NPQDDIRGIGASLYALLVNRWPLPE-AGVRSGLAPAERDTAGQPIEPADIDRDIPFQIS 237

Query: 119 HLLSRIFVADPEKR 132
            + +R    D   R
Sbjct: 238 AVAARSVQGDGGIR 251

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 6/89 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAY--IAPEVLSRK 58
           M   HRDL+  N L+  +     K+ DFG ++    +               APE     
Sbjct: 299 MNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            +  K +DVWS G+ L  +   G  P+  
Sbjct: 357 RFTIK-SDVWSFGILLTELTTKGRVPYPG 384

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 6/89 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAY--IAPEVLSRK 58
           M   HRDL+  N L+  +     K+ DFG ++    +               APE     
Sbjct: 382 MNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 439

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            +  K +DVWS G+ L  +   G  P+  
Sbjct: 440 RFTIK-SDVWSFGILLTELTTKGRVPYPG 467

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAY--IAPEVLSRK 58
               HR+L   N L+  +    +K+ DFG S+     +              APE L+  
Sbjct: 337 KNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 394

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           ++  K +DVW+ GV L+ +   G  P+  
Sbjct: 395 KFSIK-SDVWAFGVLLWEIATYGMSPYPG 422

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 45.3 bits (107), Expect = 5e-06
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
            +  HRDL   N LL       +KICDFG ++   ++  P       A +     APE +
Sbjct: 212 RKCIHRDLAARNILLSEKNV--VKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPETI 267

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNF 93
             + Y  + +DVWS GV L+ +  +GA P+   +    F
Sbjct: 268 FDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 11/92 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
               HRDL   N L+       LKI DFG S+         +  G    +     APE L
Sbjct: 232 KCCIHRDLAARNCLVTEKNV--LKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEAL 287

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           +   Y  + +DVWS G+ L+    +GA P+ +
Sbjct: 288 NYGRYSSE-SDVWSFGILLWETFSLGASPYPN 318

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGT--P-AYIAPEVLSRKEYD 61
           HRDL   N L+   +   +KI DFG +K      +     G   P  ++A E +  + Y 
Sbjct: 140 HRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197

Query: 62  GKIADVWSCGVTLY-VMLVGAYPFED 86
            + +DVWS GVT++ +M  G+ P++ 
Sbjct: 198 HQ-SDVWSYGVTVWELMTFGSKPYDG 222

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
            +  HRDL   N L++     R+KI DFG +K  +   +    V  P        APE L
Sbjct: 133 KRYIHRDLATRNILVENEN--RVKIGDFGLTKV-LPQDKEFFKVKEPGESPIFWYAPESL 189

Query: 56  SRKEYDGKIADVWSCGVTLY 75
           +  ++    +DVWS GV LY
Sbjct: 190 TESKFSVA-SDVWSFGVVLY 208

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
            +  HRDL   N L+      R+KI DFG +K  +   +    V  P        APE L
Sbjct: 164 KRYIHRDLATRNILV--ENENRVKIGDFGLTKV-LPQDKEYYKVKEPGESPIFWYAPESL 220

Query: 56  SRKEYDGKIADVWSCGVTLY 75
           +  ++    +DVWS GV LY
Sbjct: 221 TESKFSVA-SDVWSFGVVLY 239

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 12/90 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
               HRDL   N L+        K+ DFG +K +       +       +   APE L  
Sbjct: 308 NNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALRE 360

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           K++  K +DVWS G+ L+ +   G  P+  
Sbjct: 361 KKFSTK-SDVWSFGILLWEIYSFGRVPYPR 389

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 12/89 (13%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYI---APEVLSRK 58
           HRDL   N LL  +    +KI DFG  +   L                    APE L  +
Sbjct: 144 HRDLAARNLLL--ATRDLVKIGDFGLMR--ALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            +    +D W  GVTL+ +   G  P+  
Sbjct: 200 TFSHA-SDTWMFGVTLWEMFTYGQEPWIG 227

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 12/111 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYI-----APEV 54
            +  HRDL   N L+       +KI DFG +K  +L        V  P        APE 
Sbjct: 146 RRCVHRDLAARNILV--ESEAHVKIADFGLAK--LLPLDKDYYVVREPGQSPIFWYAPES 201

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPRNFKTTIQRILSVH 104
           LS   +  + +DVWS GV LY +            +        + + ++ 
Sbjct: 202 LSDNIFSRQ-SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVLSRKE 59
           HR+L   N LL       +++ DFG +   +L    K  + + A       A E +   +
Sbjct: 138 HRNLAARNVLLKSPSQ--VQVADFGVAD--LLPPDDKQLLYSEAKTPIKWMALESIHFGK 193

Query: 60  YDGKIADVWSCGVTLY-VMLVGAYPFED 86
           Y  + +DVWS GVT++ +M  GA P+  
Sbjct: 194 YTHQ-SDVWSYGVTVWELMTFGAEPYAG 220

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 12/93 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGT--P-AYIAPEV 54
               HRDL   N LL        KI DFG SK   L +     K+      P  + APE 
Sbjct: 136 SNFVHRDLAARNVLLVTQHY--AKISDFGLSK--ALRADENYYKAQTHGKWPVKWYAPEC 191

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           ++  ++  K +DVWS GV ++     G  P+  
Sbjct: 192 INYYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 223

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
               HRDL+  N L+  S     KI DFG ++  +  ++  +  G    I   APE ++ 
Sbjct: 303 RNYIHRDLRAANILVSASLV--CKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAINF 359

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
             +  K +DVWS G+ L  ++  G  P+  
Sbjct: 360 GSFTIK-SDVWSFGILLMEIVTYGRIPYPG 388

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYI---APEVLS 56
           +   HRDL   N L+D +     K+ DFG S+          +T G    I   APE ++
Sbjct: 170 LGYVHRDLAARNVLVDSNLV--CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227

Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            + +    +DVWS GV ++ V+  G  P+ +
Sbjct: 228 FRTFSSA-SDVWSFGVVMWEVLAYGERPYWN 257

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
            Q  HRDL   N L+D      +K+ DFG ++  VL  Q  S+VGT   +   APEV   
Sbjct: 123 HQFIHRDLAARNCLVDRDLC--VKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAPEVFHY 179

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            +Y  K +DVW+ G+ ++ V  +G  P++ 
Sbjct: 180 FKYSSK-SDVWAFGILMWEVFSLGKMPYDL 208

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 12/89 (13%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYI---APEVLSRK 58
           HR+L   N LL        KI DFG SK   L +      +       +   APE ++ +
Sbjct: 459 HRNLAARNVLLVNRHY--AKISDFGLSK--ALGADDSYYTARSAGKWPLKWYAPECINFR 514

Query: 59  EYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           ++  + +DVWS GVT++  +  G  P++ 
Sbjct: 515 KFSSR-SDVWSYGVTMWEALSYGQKPYKK 542

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGT--P-AYIAPEVLSRKEYD 61
           HRDL   N L+   +   +KI DFG +K      +     G   P  ++A E +  + Y 
Sbjct: 140 HRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197

Query: 62  GKIADVWSCGVTLY-VMLVGAYPFED 86
            + +DVWS GVT++ +M  G+ P++ 
Sbjct: 198 HQ-SDVWSYGVTVWELMTFGSKPYDG 222

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGT--P-AYIAPEV 54
               HRDL   N LL        KI DFG SK   L +      +      P  + APE 
Sbjct: 129 KNFVHRDLAARNVLLVNRHY--AKISDFGLSK--ALGADDSYYTARSAGKWPLKWYAPEC 184

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           ++ +++  + +DVWS GVT++  +  G  P++ 
Sbjct: 185 INFRKFSSR-SDVWSYGVTMWEALSYGQKPYKK 216

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
             + HRDL   N L+  ++   +K+ DFG ++  VL  Q  S+ GT   +   +PEV S 
Sbjct: 123 ACVIHRDLAARNCLVGENQV--IKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 179

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
             Y  K +DVWS GV ++ V   G  P+E+
Sbjct: 180 SRYSSK-SDVWSFGVLMWEVFSEGKIPYEN 208

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
               HRDL   N LL       +KI DFG +K+ V        V           APE L
Sbjct: 153 QHYIHRDLAARNVLL--DNDRLVKIGDFGLAKA-VPEGHEYYRVREDGDSPVFWYAPECL 209

Query: 56  SRKEYDGKIADVWSCGVTLY 75
              ++    +DVWS GVTLY
Sbjct: 210 KEYKFYYA-SDVWSFGVTLY 228

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 12/93 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYI---APEV 54
           M   HRDL   N L++ +     K+ DFG  +  VL   P    +T G    I   +PE 
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLGR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           ++ +++    +DVWS G+ L+ VM  G  P+ +
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWE 253

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGT--PA-YIAPEVLSR 57
               HRDL   N L+  +    +K+ DFG S+  +      +  G   P  + APE L+ 
Sbjct: 130 KNFIHRDLAARNCLVGENHL--VKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAY 186

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            ++  K +DVW+ GV L+ +   G  P+  
Sbjct: 187 NKFSIK-SDVWAFGVLLWEIATYGMSPYPG 215

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYI---APEVLS 56
           M   HRDL   N L++ +     K+ DFG S+      +   +T G    I   APE +S
Sbjct: 166 MNYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223

Query: 57  RKEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            +++    +DVWS G+ ++ VM  G  P+ +
Sbjct: 224 YRKFTSA-SDVWSFGIVMWEVMTYGERPYWE 253

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 11/81 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYI-----APEV 54
            Q  HRDL   N L++     ++KI DFG +K   + +  +  TV           APE 
Sbjct: 145 RQYVHRDLAARNVLVESEH--QVKIGDFGLTK--AIETDKEYYTVKDDRDSPVFWYAPEC 200

Query: 55  LSRKEYDGKIADVWSCGVTLY 75
           L + ++    +DVWS GVTL+
Sbjct: 201 LMQSKFYIA-SDVWSFGVTLH 220

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 41.4 bits (98), Expect = 9e-05
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 12/90 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
               HRDL   N L+        K+ DFG +K +       +       +   APE L  
Sbjct: 136 NNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALRE 188

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
           K++  K +DVWS G+ L+ +   G  P+  
Sbjct: 189 KKFSTK-SDVWSFGILLWEIYSFGRVPYPR 217

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
               HRDL+  N L+  + +   KI DFG ++  +  ++  +  G    I   APE ++ 
Sbjct: 128 RNYIHRDLRAANILVSDTLS--CKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINY 184

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
             +  K +DVWS G+ L  ++  G  P+  
Sbjct: 185 GTFTIK-SDVWSFGILLTEIVTHGRIPYPG 213

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI---APEVLSR 57
            Q  HRDL   N L++      +K+ DFG S+  VL  +  S+VG+   +    PEVL  
Sbjct: 139 KQFLHRDLAARNCLVNDQGV--VKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMY 195

Query: 58  KEYDGKIADVWSCGVTLY-VMLVGAYPFED 86
            ++  K +D+W+ GV ++ +  +G  P+E 
Sbjct: 196 SKFSSK-SDIWAFGVLMWEIYSLGKMPYER 224

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYI-----APEV 54
               HRD+   N LL      R+ KI DFG ++   ++       G  A +      PE 
Sbjct: 200 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRAGYYRKGGCAMLPVKWMPPEA 257

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPF 84
                +  K  D WS GV L+ +  +G  P+
Sbjct: 258 FMEGIFTSK-TDTWSFGVLLWEIFSLGYMPY 287

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYI-----APEV 54
               HRD+   N LL      R+ KI DFG ++   ++       G  A +      PE 
Sbjct: 159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEA 216

Query: 55  LSRKEYDGKIADVWSCGVTLY-VMLVGAYPF 84
                +  K  D WS GV L+ +  +G  P+
Sbjct: 217 FMEGIFTSK-TDTWSFGVLLWEIFSLGYMPY 246

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 11/89 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
               HRDL   N LL   +    KICDFG ++   + +     V   A +     APE +
Sbjct: 164 KNCIHRDLAARNILLTHGRI--TKICDFGLAR--DIKNDSNYVVKGNARLPVKWMAPESI 219

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYP 83
               Y  + +DVWS G+ L+ +  +G+ P
Sbjct: 220 FNCVYTFE-SDVWSYGIFLWELFSLGSSP 247

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 11/90 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
            +  HRDL   N LL       +KICDFG ++   ++  P       A +     APE +
Sbjct: 167 RKCIHRDLAARNILLSEKNV--VKICDFGLAR--DIYKDPDYVRKGDARLPLKWMAPETI 222

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPF 84
             + Y  + +DVWS GV L+ +  +GA P+
Sbjct: 223 FDRVYTIQ-SDVWSFGVLLWEIFSLGASPY 251

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 11/89 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
               HRD+   N LL        KI DFG ++   + +     V   A +     APE +
Sbjct: 183 KNCIHRDVAARNVLLTNGHV--AKIGDFGLARD--IMNDSNYIVKGNARLPVKWMAPESI 238

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYP 83
               Y  + +DVWS G+ L+ +  +G  P
Sbjct: 239 FDCVYTVQ-SDVWSYGILLWEIFSLGLNP 266

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 10/80 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
            +  HRDL   N L+       +KI DFG ++   +H        T   +     APE L
Sbjct: 210 KKCIHRDLAARNVLVTEDNV--MKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEAL 265

Query: 56  SRKEYDGKIADVWSCGVTLY 75
             + Y  + +DVWS GV L+
Sbjct: 266 FDRIYTHQ-SDVWSFGVLLW 284

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
            +  HRDL   N L+  +    +KI DFG ++   +++       T   +     APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV--MKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEAL 231

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYP 83
             + Y  + +DVWS GV ++ +  +G  P
Sbjct: 232 FDRVYTHQ-SDVWSFGVLMWEIFTLGGSP 259

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 11/90 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
           M++ HRDL   N L+   +   +KI DFG S+   ++ +      +   I     A E L
Sbjct: 169 MKLVHRDLAARNILVAEGRK--MKISDFGLSRD--VYEEDSYVKRSQGRIPVKWMAIESL 224

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYPF 84
               Y  + +DVWS GV L+ ++ +G  P+
Sbjct: 225 FDHIYTTQ-SDVWSFGVLLWEIVTLGGNPY 253

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 10/87 (11%)

Query: 5   HRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVG-TPA-YIAPEVLSRKEY 60
           HRD+   N L+  +    +K+ DFG S+   +      K++ G  P  ++APE ++ + +
Sbjct: 514 HRDIAARNVLVSSNDC--VKLGDFGLSR--YMEDSTYYKASKGKLPIKWMAPESINFRRF 569

Query: 61  DGKIADVWSCGVTLY-VMLVGAYPFED 86
               +DVW  GV ++ +++ G  PF+ 
Sbjct: 570 TSA-SDVWMFGVCMWEILMHGVKPFQG 595

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 11/89 (12%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI-----APEVL 55
               HRDL   N L+   K   +KICDFG ++   + S     V   A +     APE L
Sbjct: 191 KSCVHRDLAARNVLVTHGKV--VKICDFGLARD--IMSDSNYVVRGNARLPVKWMAPESL 246

Query: 56  SRKEYDGKIADVWSCGVTLY-VMLVGAYP 83
               Y  K +DVWS G+ L+ +  +G  P
Sbjct: 247 FEGIYTIK-SDVWSYGILLWEIFSLGVNP 274

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	225
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.98
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.98
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.98
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.98
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.98
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.98
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.98
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.98
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.98
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.98
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.95
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.95
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.95
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.94
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.94
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.94
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.94
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.94
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.94
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.94
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.94
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.94
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.94
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.94
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.94
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.94
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.94
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.94
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.94
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.93
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.93
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.93
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.93
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.93
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.93
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.93
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.93
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.93
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.93
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.93
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.93
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.93
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.93
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.93
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.93
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.92
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.92
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.92
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.89
3uqc_A	286	Probable conserved transmembrane protein; structur	99.8
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.7
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.34
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.86
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.4
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.58
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.17
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.89
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.41
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.38
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.67
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.21
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.85
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.78
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	94.57
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	94.24
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	94.11
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	94.11
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	93.7
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.69
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	93.58
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.01
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	92.4
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	92.26
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	91.51
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	91.43
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	90.43
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	90.15
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	89.9
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.49
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	86.26
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	84.36
3mes_A	424	Choline kinase; malaria, structural genomics, stru	84.04

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.8e-42  Score=283.85  Aligned_cols=224  Identities=67%  Similarity=1.071  Sum_probs=130.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++.+.+||+|||+++...........+||+.|+|||++.+..+.++++|||||||++|+|++|
T Consensus       135 ~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  214 (361)
T 3uc3_A          135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG  214 (361)
T ss_dssp             TTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhC
Confidence            48999999999999987765569999999998655555555668999999999998888876668999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCccccccccccc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSM  160 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~~~~~~~~~~  160 (225)
                      +.||.+......+......+.......+....+++.+++||.+||..||.+|||+.++++||||.+..+...........
T Consensus       215 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~  294 (361)
T 3uc3_A          215 AYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGS  294 (361)
T ss_dssp             SCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCCCC---------
T ss_pred             CCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCchhhhccccccc
Confidence            99998877666667777777777777777667899999999999999999999999999999998877766554433333


Q ss_pred             CCCCCCccccCHHHHHHHHHHhccCCCCCCCCCCcCCCCCCCCC---CCCCCCCCCCcccCCceeecC
Q 027327          161 QKGDENDQSQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMDLD---DLDTDADTDDIETSGDFVCAL  225 (225)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~~~  225 (225)
                      .........++++.+...+.+...+........... .+..+.+   ++++++++.|+|.+|+|+|||
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~d~~~~~~d~~~~~d~d~~g~~~~~~  361 (361)
T 3uc3_A          295 QFQEPEQPMQSLDTIMQIISEATIPAVRNRCLDDFM-TDNLDLDDDMDDFDSESEIDIDSSGEIVYAL  361 (361)
T ss_dssp             ---------CCHHHHHHHHHHHTCC-------------------------------------------
T ss_pred             cccCCcccccCHHHHHHHHhhccCcccccccchhcc-ccccccccccccccchhhhccCCCCcEEecC
Confidence            333344556778888888887776654333322222 2233322   222335667899999999996

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=5.2e-42  Score=271.90  Aligned_cols=142  Identities=42%  Similarity=0.691  Sum_probs=109.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  ++||+|||+|+.........+.+||+.|||||++.+..|.+.++|||||||++|+|++|
T Consensus       131 ~~IiHRDiKP~NILl~~~~--~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg  208 (275)
T 3hyh_A          131 HKIVHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR  208 (275)
T ss_dssp             TTCCCCCCCTTTEEECTTC--CEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCcccccCChHHeEECCCC--CEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHC
Confidence            5899999999999998776  79999999998766655666778999999999999888877679999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      +.||.+.+.    ....+.+....+..|.  .+|+++++||.+||++||.+|||++|+++||||+...+.
T Consensus       209 ~~PF~~~~~----~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p~  272 (275)
T 3hyh_A          209 RLPFDDESI----PVLFKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPE  272 (275)
T ss_dssp             SCSSCCSSH----HHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCCG
T ss_pred             CCCCCCCCH----HHHHHHHHcCCCCCCC--CCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccCCCh
Confidence            999987543    3344445555555443  589999999999999999999999999999999876553

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2e-40  Score=270.09  Aligned_cols=143  Identities=32%  Similarity=0.558  Sum_probs=116.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+|+..... ....+.+||+.|||||++.+..|+.+ +|||||||++|+|++
T Consensus       189 ~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~-~DiWSlGvilyeml~  265 (346)
T 4fih_A          189 QGVIHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPE-VDIWSLGIMVIEMVD  265 (346)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCcccccCCHHHEEECCCC--CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcH-HHHHHHHHHHHHHHH
Confidence            5899999999999998777  7999999999865443 33456789999999999988888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc-cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      |+.||.+.+....+    ..+... ....+....+++++++||.+||.+||++|||+.|+|+||||.+..+.
T Consensus       266 G~~PF~~~~~~~~~----~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p  333 (346)
T 4fih_A          266 GEPPYFNEPPLKAM----KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP  333 (346)
T ss_dssp             SSCTTTTSCHHHHH----HHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             CCCCCCCcCHHHHH----HHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence            99999876543333    223222 22334445689999999999999999999999999999999876543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=5.6e-40  Score=263.82  Aligned_cols=137  Identities=32%  Similarity=0.612  Sum_probs=114.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  ++||+|||+|+.....   ....+.+||+.|||||++.+..|+.+ +|||||||++|+|
T Consensus       151 ~~IiHRDlKPeNILl~~~g--~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~-~DiWSlGvilyem  227 (311)
T 4aw0_A          151 KGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS-SDLWALGCIIYQL  227 (311)
T ss_dssp             TTEECSCCSGGGEEECTTS--CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHH-HHHHHHHHHHHHH
T ss_pred             CCCccCCCCHHHeEEcCCC--CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcH-HHHHHHHHHHHHH
Confidence            5899999999999998777  7999999999865432   23345689999999999998888654 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHH------HhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPE------IQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~e------il~hp~~~~  146 (225)
                      ++|+.||.+.+.    ..+..++....+.+|.  .+++++++||.+||++||.+|||++|      |++||||..
T Consensus       228 l~G~~PF~~~~~----~~~~~~i~~~~~~~p~--~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~  296 (311)
T 4aw0_A          228 VAGLPPFRAGNE----GLIFAKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  296 (311)
T ss_dssp             HHSSCSSCCSSH----HHHHHHHHHTCCCCCT--TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             HhCCCCCCCCCH----HHHHHHHHcCCCCCCc--ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence            999999987554    3344555555555554  58999999999999999999999987      689999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=4e-39  Score=268.48  Aligned_cols=143  Identities=32%  Similarity=0.558  Sum_probs=116.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+||||+.++  .+||+|||+|+..... ....+.+||+.|||||++.+..|+.+ +|||||||++|+|++
T Consensus       266 ~~IiHRDiKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~-~DiWSlGvilyeml~  342 (423)
T 4fie_A          266 QGVIHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPE-VDIWSLGIMVIEMVD  342 (423)
T ss_dssp             TTEECCCCSTTTEEECTTC--CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCeecccCCHHHEEEcCCC--CEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcH-HHHHHHHHHHHHHHH
Confidence            5899999999999998777  7999999999865443 33456789999999999998888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc-cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      |+.||.+......+    ..+... ....+....+++++++||.+||.+||.+|||+.|+|+||||.+..+.
T Consensus       343 G~~PF~~~~~~~~~----~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p  410 (423)
T 4fie_A          343 GEPPYFNEPPLKAM----KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP  410 (423)
T ss_dssp             SSCTTTTSCHHHHH----HHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             CCCCCCCcCHHHHH----HHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence            99999876543333    223222 22334445689999999999999999999999999999999876443

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.2e-39  Score=260.25  Aligned_cols=137  Identities=26%  Similarity=0.481  Sum_probs=107.3

Q ss_pred             eEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            3 ICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         3 ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      ||||||||+|||++. ++  .+||+|||+|+... .....+.+||+.|||||++.+ .|+. ++|||||||++|+|++|+
T Consensus       152 IiHRDlKp~NILl~~~~g--~vKl~DFGla~~~~-~~~~~~~~GTp~YmAPE~~~~-~y~~-~~DiwSlGvilyelltg~  226 (290)
T 3fpq_A          152 IIHRDLKCDNIFITGPTG--SVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEE-KYDE-SVDVYAFGMCMLEMATSE  226 (290)
T ss_dssp             CCCCCCCGGGEEESSTTS--CEEECCTTGGGGCC-TTSBEESCSSCCCCCGGGGGT-CCCT-HHHHHHHHHHHHHHHHSS
T ss_pred             EEecccChhheeEECCCC--CEEEEeCcCCEeCC-CCccCCcccCccccCHHHcCC-CCCc-HHHHHHHHHHHHHHHHCC
Confidence            999999999999974 44  79999999997532 333456689999999999865 5764 499999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      .||.+......   +...+.....+......+++++++||.+||.+||.+|||+.++|+||||++.
T Consensus       227 ~Pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          227 YPYSECQNAAQ---IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             CTTTTCSSHHH---HHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             CCCCCCCcHHH---HHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence            99987555433   3333333322222233578899999999999999999999999999999753

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.9e-39  Score=260.51  Aligned_cols=137  Identities=39%  Similarity=0.654  Sum_probs=112.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+|+..... ....+.+||+.|||||++.+..|+.+ +|||||||++|+|++
T Consensus       145 ~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~-~DiwSlGvilyemlt  221 (304)
T 3ubd_A          145 LGIIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS-ADWWSFGVLMFEMLT  221 (304)
T ss_dssp             TTCCCSSCCGGGEEECTTS--CEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTH-HHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCHHHeEEcCCC--CEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCC-CcccchHHHHHHHHh
Confidence            5899999999999998777  7999999999864433 34456789999999999998888755 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      |+.||.+.+..    .....+....+..|.  .+|+++++||++||++||++|||     ++|+++||||+.
T Consensus       222 G~~PF~~~~~~----~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          222 GTLPFQGKDRK----ETMTMILKAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             SSCSSCCSSHH----HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             CCCCCCCcCHH----HHHHHHHcCCCCCCC--cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence            99999875543    334445555544443  58999999999999999999998     479999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=6.8e-40  Score=267.36  Aligned_cols=140  Identities=27%  Similarity=0.530  Sum_probs=114.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+|+....... ..+.+||+.|||||++.+..|+.+ +|||||||++|+|++
T Consensus       144 ~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~-~DiwSlGvilyemlt  220 (350)
T 4b9d_A          144 RKILHRDIKSQNIFLTKDG--TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNK-SDIWALGCVLYELCT  220 (350)
T ss_dssp             TTCEETTCCGGGEEECTTC--CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHH-HHHHHHHHHHHHHHH
T ss_pred             CCeeeccCCHHHEEECCCC--CEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcH-HHHHHHHHHHHHHHH
Confidence            5899999999999998776  799999999986543221 234579999999999998888755 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |+.||.+.+...    .+.++....+. +....+|.++++||.+||++||.+|||+.|+|+||||.+..
T Consensus       221 G~~PF~~~~~~~----~~~~i~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~  284 (350)
T 4b9d_A          221 LKHAFEAGSMKN----LVLKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI  284 (350)
T ss_dssp             SSCSCCCSSHHH----HHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred             CCCCCCCcCHHH----HHHHHHcCCCC-CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence            999998765433    33344443332 23346899999999999999999999999999999997643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=261.70  Aligned_cols=147  Identities=26%  Similarity=0.362  Sum_probs=115.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-----CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-----HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-----~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +|||||||||+|||++.++  .+||+|||+|+....     .....+.+||+.|||||++.+..+.+.++||||+||++|
T Consensus       177 ~~iiHRDlKP~NIl~~~~~--~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~  254 (398)
T 4b99_A          177 AQVIHRDLKPSNLLVNENC--ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG  254 (398)
T ss_dssp             TTCBCCCCCGGGEEECTTC--CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             CcCcCCCcCccccccCCCC--CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHH
Confidence            5899999999999998777  799999999986432     223345689999999999988776667799999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhccccc----------------CCC---------CCCCCHHHHHHHHhhcccCCC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYS----------------IPG---------YVRVSLECRHLLSRIFVADPE  130 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------------~~~---------~~~~~~~~~~li~~~l~~dP~  130 (225)
                      +|++|++||.+.+....+..+..........                .+.         ++.+++++++||.+||.+||.
T Consensus       255 ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~  334 (398)
T 4b99_A          255 EMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPS  334 (398)
T ss_dssp             HHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTT
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChh
Confidence            9999999999877665555544332211100                010         134788999999999999999


Q ss_pred             CCCCHHHHhcCcccCcCCC
Q 027327          131 KRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       131 ~R~s~~eil~hp~~~~~~~  149 (225)
                      +|||+.|+|+||||.+...
T Consensus       335 ~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          335 ARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             TSCCHHHHTTSGGGTTTCC
T ss_pred             HCcCHHHHhcCHhhCcCCC
Confidence            9999999999999987543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4e-38  Score=259.30  Aligned_cols=145  Identities=30%  Similarity=0.538  Sum_probs=105.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-----------------------------CCCCCcccCCCCCc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-----------------------------SQPKSTVGTPAYIA   51 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-----------------------------~~~~~~~g~~~y~a   51 (225)
                      +|||||||||+|||++.+. +.+||+|||+|+.....                             ....+.+||+.|+|
T Consensus       136 ~gIiHRDiKPeNiLl~~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A  214 (361)
T 4f9c_A          136 FGIVHRDVKPSNFLYNRRL-KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRA  214 (361)
T ss_dssp             TTEECSCCSGGGEEEETTT-TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCC
T ss_pred             CCeEeCcCCHHHeEEeCCC-CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccC
Confidence            5899999999999997652 27999999999743221                             11234579999999


Q ss_pred             cccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhH-HHHHHH--------------------------------
Q 027327           52 PEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQ--------------------------------   98 (225)
Q Consensus        52 PE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~--------------------------------   98 (225)
                      ||++.+..+.+.++||||+||++|+|++|+.||....+... +..+..                                
T Consensus       215 PE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  294 (361)
T 4f9c_A          215 PEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKL  294 (361)
T ss_dssp             HHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHH
T ss_pred             HHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHH
Confidence            99998776555669999999999999999999965544322 221111                                


Q ss_pred             --HHhccc--------------ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           99 --RILSVH--------------YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        99 --~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                        .+....              .....+..+|+++++||++||++||++|+|++|+|+||||++
T Consensus       295 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          295 CERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             HHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence              000000              011223458899999999999999999999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=6.8e-38  Score=254.41  Aligned_cols=141  Identities=25%  Similarity=0.313  Sum_probs=109.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC------CCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ------PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~------~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      +|||||||||+|||++.++. ++||+|||+|+.......      ....+||+.|||||++.+..|+.+ +|||||||++
T Consensus       169 ~~IiHRDlKp~NILl~~~g~-~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~-~DiwSlGvil  246 (336)
T 4g3f_A          169 RRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK-VDIWSSCCMM  246 (336)
T ss_dssp             TTEECSCCCGGGEEECTTSC-CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTH-HHHHHHHHHH
T ss_pred             CCceecccCHHHEEEeCCCC-EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcH-HHHHHHHHHH
Confidence            58999999999999987653 599999999986543221      223579999999999999888755 9999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccC-CCCCCCCHHHHHHHHhhcccCCCCCCCHHHH-------------hc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI-PGYVRVSLECRHLLSRIFVADPEKRITIPEI-------------QK  140 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~s~~ei-------------l~  140 (225)
                      |+|++|+.||.+......+..+..    ..... ..+..+++.+++||.+||++||.+|||+.|+             ++
T Consensus       247 yemltG~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~  322 (336)
T 4g3f_A          247 LHMLNGCHPWTQYFRGPLCLKIAS----EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLK  322 (336)
T ss_dssp             HHHHHSSCSSTTTCCSCCHHHHHH----SCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSC
T ss_pred             HHHHHCcCCCCCCCHHHHHHHHHc----CCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhcc
Confidence            999999999987665444433322    22111 1234689999999999999999999999997             57


Q ss_pred             CcccCcC
Q 027327          141 HPWFLKN  147 (225)
Q Consensus       141 hp~~~~~  147 (225)
                      |||+.+.
T Consensus       323 hPw~~~~  329 (336)
T 4g3f_A          323 SPWKGEY  329 (336)
T ss_dssp             SCSSSSC
T ss_pred             CCCcCCC
Confidence            8998653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.8e-36  Score=263.65  Aligned_cols=139  Identities=32%  Similarity=0.518  Sum_probs=113.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC-ccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK-EYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~-~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+|+.... ....+.+||+.|||||++.++ .|+ .++|||||||++|+|++
T Consensus       311 ~gIiHRDLKPeNILld~~G--~vKL~DFGlA~~~~~-~~~~t~~GTp~YmAPEvl~~~~~y~-~~vDiWSLGvilYEmLt  386 (689)
T 3v5w_A          311 RFVVYRDLKPANILLDEHG--HVRISDLGLACDFSK-KKPHASVGTHGYMAPEVLQKGVAYD-SSADWFSLGCMLFKLLR  386 (689)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECSS-CCCCSCCSCGGGCCHHHHSTTCCCC-THHHHHHHHHHHHHHHH
T ss_pred             CCccccCCchHHeEEeCCC--CEEecccceeeecCC-CCCCCccCCcCccCHHHHhCCCCCC-cHHHHHHHHHHHHHHHh
Confidence            5899999999999998777  799999999986543 334567899999999999754 555 55999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      |+.||.+..... ...+...+.......|.  .+|+++++||.+||.+||.+|++     +++|++||||+.
T Consensus       387 G~~PF~~~~~~~-~~~i~~~i~~~~~~~p~--~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          387 GHSPFRQHKTKD-KHEIDRMTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             SSCTTCGGGCCC-HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             CCCCCCCCChHH-HHHHHHhhcCCCCCCCc--cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence            999997643322 23444555555555443  58999999999999999999998     799999999974

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.9e-36  Score=262.82  Aligned_cols=142  Identities=30%  Similarity=0.570  Sum_probs=118.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.+..+.+||+|||+|+...........+||+.|||||++.+..|+.+ +|||||||++|+|++|
T Consensus       274 ~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~-~DiWSlGvilyeml~G  352 (573)
T 3uto_A          274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY-TDMWSVGVLSYILLSG  352 (573)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHH-HHHHHHHHHHHHHHHS
T ss_pred             CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcH-HHHHHHHHHHHHHHHC
Confidence            589999999999999866445899999999997766655566789999999999999888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.+.....    .+..+....+..  +.+..+|.++++||++||.+||.+|||+.|+|+||||+..
T Consensus       353 ~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~  417 (573)
T 3uto_A          353 LSPFGGENDDE----TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG  417 (573)
T ss_dssp             CCSSCCSSHHH----HHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             CCCCCCcCHHH----HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCC
Confidence            99998765533    334444443333  2345689999999999999999999999999999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.9e-36  Score=243.27  Aligned_cols=136  Identities=23%  Similarity=0.393  Sum_probs=98.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-------------CCCcccCCCCCccccccCCccCCCcccH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-------------PKSTVGTPAYIAPEVLSRKEYDGKIADV   67 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-------------~~~~~g~~~y~aPE~l~~~~~~~~~~Di   67 (225)
                      +|||||||||+|||++.++  .+||+|||+|+.......             ..+.+||+.|||||++.+..|+.+ +||
T Consensus       137 ~~IiHRDlKp~NILl~~~~--~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~-~Di  213 (299)
T 4g31_A          137 KGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHK-VDI  213 (299)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTH-HHH
T ss_pred             CcCccccCcHHHeEECCCC--cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCH-HHH
Confidence            5899999999999998776  799999999986543221             123479999999999998888755 999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           68 WSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        68 wslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |||||++|+|++   ||...   ......+..+....++ +.+...++.+.+||++||++||.+|||+.++++||||..
T Consensus       214 wSlGvilyell~---Pf~~~---~~~~~~~~~~~~~~~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          214 FSLGLILFELLY---PFSTQ---MERVRTLTDVRNLKFP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             HHHHHHHHHHHS---CCSSH---HHHHHHHHHHHTTCCC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             HHHHHHHHHHcc---CCCCc---cHHHHHHHHHhcCCCC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence            999999999995   77542   1122223333322211 112235677899999999999999999999999999964

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=6.2e-36  Score=240.52  Aligned_cols=139  Identities=24%  Similarity=0.364  Sum_probs=101.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCC---ccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRK---EYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~---~~~~~~~DiwslG~il   74 (225)
                      +|||||||||+|||++.++  .+||+|||+|+.....   ......+||+.|||||++.+.   .|+. ++|||||||++
T Consensus       151 ~~IiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~-ksDVwS~Gvvl  227 (307)
T 3omv_A          151 KNIIHRDMKSNNIFLHEGL--TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF-QSDVYSYGIVL  227 (307)
T ss_dssp             TTCBCSCCCSSSEEEETTE--EEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCH-HHHHHHHHHHH
T ss_pred             CCccCCccCHHHEEECCCC--cEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCc-HHHhHhHHHHH
Confidence            4899999999999998777  7999999999864332   223455799999999999643   3554 49999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      |||++|+.||.+..........+...............++.++.+|+.+||+.||.+|||+.+|+++.
T Consensus       228 ~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L  295 (307)
T 3omv_A          228 YELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI  295 (307)
T ss_dssp             HHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred             HHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            99999999998766654443333221111111122346889999999999999999999999886543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.5e-34  Score=245.67  Aligned_cols=147  Identities=29%  Similarity=0.421  Sum_probs=109.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|||||||||+|||++.++  .+||+|||+++...........+||+.|+|||++.+..|+.+ +|||||||++|+|++|
T Consensus       183 ~~iiHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~ell~g  259 (464)
T 3ttj_A          183 AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMVRH  259 (464)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTT-HHHHHHHHHHHHHHHS
T ss_pred             CCcccCCCChHhEEEeCCC--CEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHH-HHHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999987665555566789999999999998888755 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccc---------------cCCCCCC---------------------CCHHHHHHHHhh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHY---------------SIPGYVR---------------------VSLECRHLLSRI  124 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~---------------------~~~~~~~li~~~  124 (225)
                      +.||.+......+..++..+.....               ..+....                     .++++++||.+|
T Consensus       260 ~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~m  339 (464)
T 3ttj_A          260 KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM  339 (464)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHH
Confidence            9999887665555544433211100               0000000                     145789999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCcCCCc
Q 027327          125 FVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      |.+||.+|||+.++|+||||......
T Consensus       340 L~~dP~~R~ta~e~L~Hp~~~~~~~~  365 (464)
T 3ttj_A          340 LVIDPAKRISVDDALQHPYINVWYDP  365 (464)
T ss_dssp             SCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred             cCCChhhCCCHHHHhcChhhhhccCc
Confidence            99999999999999999999865443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.6e-34  Score=236.97  Aligned_cols=148  Identities=29%  Similarity=0.332  Sum_probs=110.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC----------------------CCCCCcccCCCCCccccccCC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH----------------------SQPKSTVGTPAYIAPEVLSRK   58 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~----------------------~~~~~~~g~~~y~aPE~l~~~   58 (225)
                      .|||||||||+|||++.++  .+||+|||+++.....                      ......+||+.|+|||++.+.
T Consensus       128 ~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (388)
T 3oz6_A          128 GGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS  205 (388)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC
T ss_pred             CCEEeCCCCHHHeEEcCCC--CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC
Confidence            4899999999999998776  7999999999754321                      112335799999999999874


Q ss_pred             ccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc---------------------------------
Q 027327           59 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY---------------------------------  105 (225)
Q Consensus        59 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------------  105 (225)
                      ...+.++|||||||++|+|++|+.||.+......+..+...+..+..                                 
T Consensus       206 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (388)
T 3oz6_A          206 TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIF  285 (388)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCH
T ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhC
Confidence            44445599999999999999999999887665554444322211000                                 


Q ss_pred             --------cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327          106 --------SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus       106 --------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                              .......+++++.+||.+||..||.+|||+.++++||||......
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~  338 (388)
T 3oz6_A          286 TKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP  338 (388)
T ss_dssp             HHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred             cchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence                    001112578899999999999999999999999999999865443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3e-34  Score=233.70  Aligned_cols=141  Identities=40%  Similarity=0.703  Sum_probs=118.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||++............+||+.|+|||++.+..+.+.++|||||||++|+|++|
T Consensus       133 ~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  210 (328)
T 3fe3_A          133 KRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG  210 (328)
T ss_dssp             TTCCCSCCCGGGEEECTTS--CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHS
T ss_pred             CCEeccCCCHHHEEEcCCC--CEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhC
Confidence            4899999999999998776  79999999998665555556678999999999999888876669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      +.||.+...    ......+....+..|.  .+++++.+||++||..||.+|||+.++++||||.....
T Consensus       211 ~~pf~~~~~----~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          211 SLPFDGQNL----KELRERVLRGKYRIPF--YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             SCSSCCSSH----HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             CCCCCCCCH----HHHHHHHHhCCCCCCC--CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence            999987543    3334444555555554  48999999999999999999999999999999986543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.7e-35  Score=240.55  Aligned_cols=134  Identities=25%  Similarity=0.426  Sum_probs=108.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ++||||||||+|||++.++  .+||+|||+|+.......   .....||+.|||||++.+..|+.+ +|||||||++|||
T Consensus       204 ~~iiHRDLK~~NILl~~~~--~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~k-sDVwS~Gv~l~El  280 (353)
T 4ase_A          204 RKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEI  280 (353)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeecCccCccceeeCCCC--CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCc-ccEeehHHHHHHH
Confidence            4899999999999998777  799999999986543322   223468999999999998888755 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |+.||.+......+...+..    ....+.+..+++++.+||.+||+.||.+|||+.+|++|
T Consensus       281 ~t~G~~Pf~~~~~~~~~~~~i~~----g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          281 FSLGASPYPGVKIDEEFCRRLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             TTTSCCSSTTCCCSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHHc----CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            98 99999886654444333322    22233334689999999999999999999999999987

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=234.69  Aligned_cols=133  Identities=22%  Similarity=0.391  Sum_probs=100.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ++||||||||+|||++.++  .+||+|||+|+......   .....+||+.|||||++.+..|+.+ +|||||||++|||
T Consensus       177 ~~iiHRDLKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~-sDvwS~Gvvl~El  253 (329)
T 4aoj_A          177 LHFVHRDLATRNCLVGQGL--VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEI  253 (329)
T ss_dssp             TTCCCSCCCGGGEEEETTT--EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeecccccHhhEEECCCC--cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCcc-ccccchHHHHHHH
Confidence            4899999999999998777  79999999998653322   2234579999999999998888755 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |+.||.+......+    ..+... ...+.+..+++++.+|+.+||+.||++|||+.+|+++
T Consensus       254 lt~G~~Pf~~~~~~~~~----~~i~~g-~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          254 FTYGKQPWYQLSNTEAI----DCITQG-RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HTTSCCTTCSSCHHHHH----HHHHHT-CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HcCCCCCCCCCCHHHHH----HHHHcC-CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            98 89999876553332    233322 1233344689999999999999999999999999875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.2e-34  Score=232.00  Aligned_cols=133  Identities=20%  Similarity=0.327  Sum_probs=107.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ++||||||||+|||++.++  .+||+|||+|+.....   ......+||+.|||||++.+..|+.+ +|||||||++|||
T Consensus       164 ~~iiHRDLK~~NILl~~~~--~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~k-sDVwSfGvvl~El  240 (308)
T 4gt4_A          164 HHVVHKDLATRNVLVYDKL--NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID-SDIWSYGVVLWEV  240 (308)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCCCCCCccccceEECCCC--CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCcc-chhhhHHHHHHHH
Confidence            4899999999999998777  7999999999854332   22334579999999999998888755 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+.....    +...+... ...+.+..++.++.+|+.+||+.||.+|||+.+|+++
T Consensus       241 ~t~g~~Pf~~~~~~~----~~~~i~~~-~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          241 FSYGLQPYCGYSNQD----VVEMIRNR-QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HTTTCCTTTTCCHHH----HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCCCCHHH----HHHHHHcC-CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            98 899998765433    33333332 2334445789999999999999999999999999875

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.1e-34  Score=231.24  Aligned_cols=131  Identities=24%  Similarity=0.386  Sum_probs=104.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ++||||||||+|||++.++  .+||+|||+|+.......   .....||+.|||||++.+..|+.+ +|||||||++|||
T Consensus       147 ~~iiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k-~DVwS~Gvvl~El  223 (299)
T 4asz_A          147 QHFVHRDLATRNCLVGENL--LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSLGVVLWEI  223 (299)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCcccCccCHhhEEECCCC--cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998777  799999999975433222   223468999999999998888755 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      ++ |+.||.+.+..+    +...+.... ..+.+..+++++.+|+.+||+.||++|||+.+|+
T Consensus       224 lt~G~~Pf~~~~~~~----~~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          224 FTYGKQPWYQLSNNE----VIECITQGR-VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             HTTTCCTTTTSCHHH----HHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HcCCCCCCCCCCHHH----HHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            98 899998765533    333333322 2233346899999999999999999999999984

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.4e-33  Score=224.04  Aligned_cols=144  Identities=26%  Similarity=0.344  Sum_probs=114.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       139 ~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~~l~~g  215 (308)
T 3g33_A          139 NCIVHRDLKPENILVTSGG--TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRR  215 (308)
T ss_dssp             TTCCCSCCCTTTEEECTTS--CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCST-HHHHHHHHHHHHTTTS
T ss_pred             CCcccCCCCHHHEEEcCCC--CEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCch-HHHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999987655555556689999999999988888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccc-cCC--------------------CCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHY-SIP--------------------GYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~-~~~--------------------~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      +.||.+.........+......... .++                    ....++..+.+||.+||++||.+|||+.++|
T Consensus       216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  295 (308)
T 3g33_A          216 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL  295 (308)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHh
Confidence            9999887665555554443321110 000                    0124788999999999999999999999999


Q ss_pred             cCcccCcC
Q 027327          140 KHPWFLKN  147 (225)
Q Consensus       140 ~hp~~~~~  147 (225)
                      +||||.+.
T Consensus       296 ~h~~~~~~  303 (308)
T 3g33_A          296 QHSYLHKD  303 (308)
T ss_dssp             TSTTC---
T ss_pred             cCccccCC
Confidence            99999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.6e-32  Score=221.79  Aligned_cols=145  Identities=28%  Similarity=0.395  Sum_probs=111.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... .......+|+.|+|||++.+....+.++|||||||++|+|++
T Consensus       138 ~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~  215 (311)
T 3niz_A          138 HRILHRDLKPQNLLINSDG--ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT  215 (311)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCchHhEEECCCC--CEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHh
Confidence            4899999999999998776  7999999999865433 223345789999999999765444455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccccc-CC-----------------------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYS-IP-----------------------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||.+......+..+.......... .+                       ....++.++++||.+||++||.+|||+
T Consensus       216 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  295 (311)
T 3niz_A          216 GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA  295 (311)
T ss_dssp             SSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             CCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCH
Confidence            999998877666555554433221110 00                       012367899999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .++++||||+.-
T Consensus       296 ~ell~hp~f~~~  307 (311)
T 3niz_A          296 RDAMNHPYFKDL  307 (311)
T ss_dssp             HHHHTSGGGTTS
T ss_pred             HHHhcCcccccC
Confidence            999999999764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.7e-33  Score=229.98  Aligned_cols=142  Identities=47%  Similarity=0.779  Sum_probs=115.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||++............+||+.|+|||++.+..+.+.++|||||||++|+|++|
T Consensus       127 ~givH~Dlkp~NIll~~~~--~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g  204 (336)
T 3h4j_B          127 HKIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG  204 (336)
T ss_dssp             HTCCCCCCSTTTEEECTTC--CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHS
T ss_pred             CCeEecCCchhhEEEcCCC--CEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhC
Confidence            3799999999999998776  79999999998766665566778999999999998888766669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      +.||........    ...+....+..|  ..+++.+.+||++||..||.+|||+.++++||||....+.
T Consensus       205 ~~Pf~~~~~~~~----~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~  268 (336)
T 3h4j_B          205 RLPFDDEFIPNL----FKKVNSCVYVMP--DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPD  268 (336)
T ss_dssp             SCSSBCSSSTTC----BCCCCSSCCCCC--TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCCG
T ss_pred             CCCCCCccHHHH----HHHHHcCCCCCc--ccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCcc
Confidence            999976543221    111112222223  3489999999999999999999999999999999876543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.5e-32  Score=224.41  Aligned_cols=137  Identities=35%  Similarity=0.652  Sum_probs=112.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  ++||+|||+++.... .......+||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       124 ~~ivHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  200 (337)
T 1o6l_A          124 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMC  200 (337)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTT-HHHHHHHHHHHHHHH
T ss_pred             CCeecCcCCHHHEEECCCC--CEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCch-hhcccchhHHHHHhc
Confidence            4899999999999998776  799999999986432 233455689999999999988888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~  146 (225)
                      |+.||......    .....+.......|.  .+++++++||.+||..||.+||     ++.++++||||..
T Consensus       201 g~~Pf~~~~~~----~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          201 GRLPFYNQDHE----RLFELILMEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             SSCSSCCSSHH----HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             CCCCCCCCCHH----HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            99999875443    233334444444443  5899999999999999999999     8999999999975

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.3e-33  Score=235.76  Aligned_cols=147  Identities=35%  Similarity=0.637  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|||||||||+|||++... .+.+||+|||+++...........+||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       180 ~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  258 (400)
T 1nxk_A          180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLC  258 (400)
T ss_dssp             TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSH-HHHHHHHHHHHHHHH
T ss_pred             CCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCc-ccHHHHHHHHHHHHh
Confidence            4899999999999998632 23799999999986655555556689999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |+.||...............+....+  ..+.+..++.++++||.+||..||.+|||+.++++||||.+..
T Consensus       259 g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          259 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             SSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            99999765432211111222222222  2233456899999999999999999999999999999997643

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=7.6e-33  Score=230.52  Aligned_cols=141  Identities=33%  Similarity=0.581  Sum_probs=112.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCC-CCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS-VLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++.. .........+||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       172 ~givHrDLKp~NILl~~~g--~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~-~DiwslGvllyell~  248 (396)
T 4dc2_A          172 RGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS-VDWWALGVLMFEMMA  248 (396)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCEEeccCCHHHEEECCCC--CEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChH-HHHHHHHHHHHHHHh
Confidence            4899999999999998777  7999999999863 23344456689999999999998888654 999999999999999


Q ss_pred             CCCCCCCCCChh-----HHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH------HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPR-----NFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI------PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~------~eil~hp~~~~  146 (225)
                      |+.||.......     ........+.......|.  .++.++++||++||+.||.+||++      .+|++||||..
T Consensus       249 G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          249 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             SSCSSTTTTC------CCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             CCCCCcccccccccchhhHHHHHHHHhccccCCCC--cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence            999996532211     112233444454444444  589999999999999999999985      79999999975

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.98  E-value=4.2e-32  Score=230.28  Aligned_cols=148  Identities=30%  Similarity=0.410  Sum_probs=101.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----------------------------CCCCcccCCCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----------------------------QPKSTVGTPAYIAP   52 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----------------------------~~~~~~g~~~y~aP   52 (225)
                      .|||||||||+|||++.++  .+||+|||+++......                            .....+||+.|+||
T Consensus       175 ~~iiHrDlKp~NILl~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP  252 (458)
T 3rp9_A          175 AGILHRDLKPANCLVNQDC--SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP  252 (458)
T ss_dssp             TTCBCCCCCGGGEEECTTC--CEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCH
T ss_pred             CCcCCCCCChhhEEECCCC--CEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccCh
Confidence            4899999999999998776  79999999998653221                            12344789999999


Q ss_pred             ccccCCccCCCcccHHHHHHHHHHHHh-----------CCCCCCCCCC--------------------hhHHHHHHHHHh
Q 027327           53 EVLSRKEYDGKIADVWSCGVTLYVMLV-----------GAYPFEDPED--------------------PRNFKTTIQRIL  101 (225)
Q Consensus        53 E~l~~~~~~~~~~DiwslG~il~~ll~-----------g~~pf~~~~~--------------------~~~~~~~~~~~~  101 (225)
                      |++......+.++|||||||++|+|++           |+++|.+...                    ...+..+...+.
T Consensus       253 E~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g  332 (458)
T 3rp9_A          253 ELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILG  332 (458)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHC
T ss_pred             HHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcC
Confidence            987544433455999999999999998           6677765431                    011111111000


Q ss_pred             -------------------cccc------cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327          102 -------------------SVHY------SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus       102 -------------------~~~~------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                                         ....      ....++.+++++.+||++||.+||.+|||+.++|+||||......
T Consensus       333 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          333 TPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA  406 (458)
T ss_dssp             CCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred             CCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence                               0000      001123568999999999999999999999999999999875443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.98  E-value=3.3e-33  Score=231.09  Aligned_cols=177  Identities=27%  Similarity=0.396  Sum_probs=114.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  .+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       146 ~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g  222 (371)
T 2xrw_A          146 AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMIKG  222 (371)
T ss_dssp             TTCCCSCCCGGGEEECTTS--CEEECCCCC----------------CTTCCHHHHTTCCCCTT-HHHHHHHHHHHHHHHS
T ss_pred             CCeecccCCHHHEEEcCCC--CEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCch-HhHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999986554444455679999999999988877655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc---------------ccCCCCC---------------------CCCHHHHHHHHhh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH---------------YSIPGYV---------------------RVSLECRHLLSRI  124 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~---------------------~~~~~~~~li~~~  124 (225)
                      +.||.+......+..+........               ...+...                     ..+..+++||.+|
T Consensus       223 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m  302 (371)
T 2xrw_A          223 GVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM  302 (371)
T ss_dssp             SCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHH
Confidence            999987665443333322110000               0000000                     0146789999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHHH
Q 027327          125 FVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ  180 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (225)
                      |..||.+|||+.++++||||.............+.............++++.+++-
T Consensus       303 L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (371)
T 2xrw_A          303 LVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIY  358 (371)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHTTCCHHHHTCCCCCCCTTTTCCCCCCHHHHHHHHH
T ss_pred             CcCChhhCCCHHHHhCCcchhhhcCccccCCCCCCCCChhhccccCcHHHHHHHHH
Confidence            99999999999999999999865444332222222222233344567777766543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.98  E-value=7.8e-33  Score=230.66  Aligned_cols=145  Identities=28%  Similarity=0.397  Sum_probs=114.3

Q ss_pred             CceEecCCCCCcEEEc-CCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~-~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++ .++  .+||+|||+++...........++|+.|+|||++.+....+.++|||||||++|+|++
T Consensus       160 ~~ivHrDlkp~Nill~~~~~--~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  237 (394)
T 4e7w_A          160 IGICHRDIKPQNLLLDPPSG--VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ  237 (394)
T ss_dssp             TTEECSCCSGGGEEEETTTT--EEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCHHHEEEcCCCC--cEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998 455  7999999999876555555667899999999999776534455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc----------c---ccCC----------CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV----------H---YSIP----------GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~----------~---~~~~----------~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||.+......+..+.......          .   ...+          ....+++++.+||.+||.+||.+|||+.
T Consensus       238 g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  317 (394)
T 4e7w_A          238 GQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAI  317 (394)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHH
Confidence            999998877655555544322110          0   0111          1123788999999999999999999999


Q ss_pred             HHhcCcccCcC
Q 027327          137 EIQKHPWFLKN  147 (225)
Q Consensus       137 eil~hp~~~~~  147 (225)
                      ++++||||...
T Consensus       318 e~l~hp~f~~~  328 (394)
T 4e7w_A          318 EALCHPFFDEL  328 (394)
T ss_dssp             HHHTSGGGSTT
T ss_pred             HHhcChhhhhh
Confidence            99999999864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.98  E-value=4.5e-33  Score=228.91  Aligned_cols=137  Identities=34%  Similarity=0.582  Sum_probs=109.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++.... .......+||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       143 ~givHrDlkp~NILl~~~g--~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  219 (353)
T 3txo_A          143 KGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPA-VDWWAMGVLLYEMLC  219 (353)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTH-HHHHHHHHHHHHHHH
T ss_pred             CCCcccCCCHHHEEECCCC--CEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCc-cCCCcchHHHHHHHh
Confidence            4899999999999998776  799999999985332 233445679999999999988777654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH------HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI------PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~------~eil~hp~~~~  146 (225)
                      |+.||......    .....+.......|.  .++..+++||++||.+||.+||++      .++++||||..
T Consensus       220 G~~Pf~~~~~~----~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          220 GHAPFEAENED----DLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             SSCSSCCSSHH----HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             CCCCCCCCCHH----HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence            99999875543    334444555544443  489999999999999999999998      89999999975

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.98  E-value=1.8e-32  Score=225.92  Aligned_cols=142  Identities=32%  Similarity=0.582  Sum_probs=114.6

Q ss_pred             CceEecCCCCCcEEEcCCCC--CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA--PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~--~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++.  ..+||+|||+++...........+||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       134 ~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~~ll  212 (361)
T 2yab_A          134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILL  212 (361)
T ss_dssp             TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTH-HHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCcc-ccHHHHHHHHHHHH
Confidence            48999999999999976542  2699999999987665555566789999999999988777644 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|..||.+.....    ....+....+..+  .+..++..+++||.+||..||.+|||+.++++||||...
T Consensus       213 ~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          213 SGASPFLGDTKQE----TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HSCCSSCCSSHHH----HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             hCCCCCCCCCHHH----HHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            9999998755433    3334444333332  224689999999999999999999999999999999753

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.98  E-value=2e-32  Score=219.93  Aligned_cols=143  Identities=30%  Similarity=0.484  Sum_probs=113.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||++........ .....||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       135 ~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  211 (297)
T 3fxz_A          135 NQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMIE  211 (297)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCceeCCCCHHHEEECCCC--CEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcH-HHHHHHHHHHHHHHh
Confidence            4899999999999998776  799999999876544332 334579999999999988888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+.||..............   ...........++..+++||.+||..||.+|||+.++++||||+...+
T Consensus       212 g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          212 GEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             SSCTTTTSCHHHHHHHHHH---HCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCCCCCCCCHHHHHHHHHh---CCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence            9999987654433322221   222233334468999999999999999999999999999999986544

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.98  E-value=1.3e-32  Score=231.06  Aligned_cols=145  Identities=32%  Similarity=0.450  Sum_probs=113.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++. .+||+|||+++...........++|+.|+|||++.+....+.++|||||||++|+|++|
T Consensus       175 ~~ivHrDlkp~NILl~~~~~-~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G  253 (420)
T 1j1b_A          175 FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG  253 (420)
T ss_dssp             TTEECSCCSGGGEEEETTTT-EEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCccccCCChhhEEEeCCCC-eEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhC
Confidence            48999999999999985532 68999999998765555555678999999999997654334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc----------c---cccCCC----------CCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS----------V---HYSIPG----------YVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~----------~---~~~~~~----------~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      +.||.+......+..++..+..          .   .+.++.          ...+++++++||.+||.+||.+|||+.+
T Consensus       254 ~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e  333 (420)
T 1j1b_A          254 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE  333 (420)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHH
Confidence            9999887665555554432211          0   011111          1246889999999999999999999999


Q ss_pred             HhcCcccCc
Q 027327          138 IQKHPWFLK  146 (225)
Q Consensus       138 il~hp~~~~  146 (225)
                      +++||||..
T Consensus       334 ~l~hp~f~~  342 (420)
T 1j1b_A          334 ACAHSFFDE  342 (420)
T ss_dssp             HHTSGGGGG
T ss_pred             HhCCHhhcc
Confidence            999999965

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.98  E-value=2e-32  Score=219.78  Aligned_cols=140  Identities=38%  Similarity=0.644  Sum_probs=111.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCcc--CCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEY--DGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~--~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++...... ......||+.|+|||++.+...  .+.++|||||||++|+|
T Consensus       156 ~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l  233 (298)
T 2zv2_A          156 QKIIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF  233 (298)
T ss_dssp             TTEECCCCCGGGEEECTTS--CEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHH
T ss_pred             CCeeccCCCHHHEEECCCC--CEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHH
Confidence            4899999999999998776  79999999997654332 2234579999999999976542  34558999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++|+.||......    .....+.......+....++..+.+||.+||..||.+|||+.++++||||.+
T Consensus       234 ~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          234 VFGQCPFMDERIM----CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             HHSSCSSCCSSHH----HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             HHCCCCCCCccHH----HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence            9999999765432    2333344444445555578999999999999999999999999999999953

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.98  E-value=4.4e-32  Score=219.79  Aligned_cols=147  Identities=27%  Similarity=0.409  Sum_probs=112.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... .......+|+.|+|||++.+....+.++|||||||++|+|++
T Consensus       127 ~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~  204 (317)
T 2pmi_A          127 NKILHRDLKPQNLLINKRG--QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT  204 (317)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCeeeCCCChHHeEEcCCC--CEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  7999999999765433 233445789999999999765433455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc----------------------------cCCCCCCCCHHHHHHHHhhcccCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY----------------------------SIPGYVRVSLECRHLLSRIFVADPEK  131 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~~dP~~  131 (225)
                      |+.||.+......+..+.........                            .......++.++++||.+||..||.+
T Consensus       205 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  284 (317)
T 2pmi_A          205 GKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDM  284 (317)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGG
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCccc
Confidence            99999877665544444332211100                            00011247889999999999999999


Q ss_pred             CCCHHHHhcCcccCcCCC
Q 027327          132 RITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       132 R~s~~eil~hp~~~~~~~  149 (225)
                      |||+.++++||||.+...
T Consensus       285 Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          285 RLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             SCCHHHHTTSGGGGGGCC
T ss_pred             CCCHHHHhCChhhhcccc
Confidence            999999999999986543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=6.4e-32  Score=216.18  Aligned_cols=145  Identities=23%  Similarity=0.363  Sum_probs=108.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... .......+|+.|+|||++.+....+.++|||||||++|+|++
T Consensus       120 ~~ivH~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  197 (292)
T 3o0g_A          120 RNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN  197 (292)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTT
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHH
Confidence            4899999999999998776  7999999999765433 233445789999999999877644556999999999999998


Q ss_pred             CCCCCCCCCChh-HHHHHHHHHhccccc-----------------------CCCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPR-NFKTTIQRILSVHYS-----------------------IPGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~-~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |..||....... .+..+..........                       ......++..+++||.+||+.||.+|||+
T Consensus       198 ~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  277 (292)
T 3o0g_A          198 AGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA  277 (292)
T ss_dssp             TSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             cCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCH
Confidence            888754444333 233322221111000                       01112478899999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .++++||||...
T Consensus       278 ~e~l~hp~f~~~  289 (292)
T 3o0g_A          278 EEALQHPYFSDF  289 (292)
T ss_dssp             HHHHTSGGGTTC
T ss_pred             HHHhcCcccccC
Confidence            999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=1.8e-32  Score=227.47  Aligned_cols=144  Identities=30%  Similarity=0.400  Sum_probs=108.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|||||||||+|||+..+..+.+||+|||+++....  ......||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       178 ~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg  254 (382)
T 2vx3_A          178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLA-IDMWSLGCILVEMHTG  254 (382)
T ss_dssp             TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTH-HHHHHHHHHHHHHHHS
T ss_pred             CCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcH-HHHHHHHHHHHHHHhC
Confidence            489999999999999654444799999999976532  3345679999999999988887655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccc--------------cC-------------------CCCCC---------------
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHY--------------SI-------------------PGYVR---------------  112 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~--------------~~-------------------~~~~~---------------  112 (225)
                      +.||.+......+..+.........              ..                   +....               
T Consensus       255 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  334 (382)
T 2vx3_A          255 EPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGR  334 (382)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGT
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCcc
Confidence            9999887665544444432211000              00                   00000               


Q ss_pred             ----------CCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          113 ----------VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       113 ----------~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                                .+..+++||.+||++||.+|||+.++|+||||.+.
T Consensus       335 ~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          335 RAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             ccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                      01368999999999999999999999999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=2e-32  Score=218.80  Aligned_cols=144  Identities=25%  Similarity=0.377  Sum_probs=107.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... .......+|+.|+|||++.+....+.++|||||||++|+|++
T Consensus       119 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  196 (288)
T 1ob3_A          119 RRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN  196 (288)
T ss_dssp             TTCCCSCCCGGGEEECTTS--CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  7999999998754322 222345789999999999765534455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc-c-------------C---------CCCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY-S-------------I---------PGYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~-~-------------~---------~~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||.+......+..+......... .             .         .....++.++++||.+||..||.+|||+.
T Consensus       197 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  276 (288)
T 1ob3_A          197 GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK  276 (288)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence            99999876655544444432211100 0             0         01124788999999999999999999999


Q ss_pred             HHhcCcccCc
Q 027327          137 EIQKHPWFLK  146 (225)
Q Consensus       137 eil~hp~~~~  146 (225)
                      ++++||||++
T Consensus       277 e~l~hp~f~~  286 (288)
T 1ob3_A          277 QALEHAYFKE  286 (288)
T ss_dssp             HHHTSGGGGC
T ss_pred             HHhcCcchhh
Confidence            9999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.2e-31  Score=221.44  Aligned_cols=144  Identities=28%  Similarity=0.400  Sum_probs=111.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC-CccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR-KEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++....  .....++|+.|+|||++.+ ..++ .++|||||||++|+|++
T Consensus       147 ~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~-~~~DiwslG~il~ell~  221 (367)
T 1cm8_A          147 AGIIHRDLKPGNLAVNEDC--ELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYT-QTVDIWSVGCIMAEMIT  221 (367)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCC-TTHHHHHHHHHHHHHHH
T ss_pred             CCccccCcCHHHEEEcCCC--CEEEEeeeccccccc--ccCcCcCCCCcCCHHHHhCCCCCC-hhhhHHHHHHHHHHHHh
Confidence            4899999999999998776  799999999986432  2345678999999999987 4454 45999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc-------------------ccC------CCCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH-------------------YSI------PGYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~-------------------~~~------~~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      |+.||.+......+..+........                   ...      .....+++.+.+||.+||..||.+|||
T Consensus       222 g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t  301 (367)
T 1cm8_A          222 GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT  301 (367)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCC
Confidence            9999988765544444333211100                   000      112357899999999999999999999


Q ss_pred             HHHHhcCcccCcCCC
Q 027327          135 IPEIQKHPWFLKNLP  149 (225)
Q Consensus       135 ~~eil~hp~~~~~~~  149 (225)
                      +.++++||||.....
T Consensus       302 ~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          302 AGEALAHPYFESLHD  316 (367)
T ss_dssp             HHHHHHSGGGTTTC-
T ss_pred             HHHHhcChHHHhhcC
Confidence            999999999986543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=9.3e-32  Score=226.65  Aligned_cols=147  Identities=30%  Similarity=0.392  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----------------------CCCCcccCCCCCccccccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----------------------QPKSTVGTPAYIAPEVLSR   57 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----------------------~~~~~~g~~~y~aPE~l~~   57 (225)
                      .||+||||||+|||++.++  .+||+|||+++......                       .....+||+.|+|||++..
T Consensus       148 ~givHrDlkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  225 (432)
T 3n9x_A          148 SGIIHRDLKPANCLLNQDC--SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL  225 (432)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT
T ss_pred             CCCCCCCCCHHHeEECCCC--CEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc
Confidence            4899999999999998776  79999999998643321                       1245679999999998754


Q ss_pred             CccCCCcccHHHHHHHHHHHHhCC-----------CCCCCCCC-----------------hhHHHHHHHHH---------
Q 027327           58 KEYDGKIADVWSCGVTLYVMLVGA-----------YPFEDPED-----------------PRNFKTTIQRI---------  100 (225)
Q Consensus        58 ~~~~~~~~DiwslG~il~~ll~g~-----------~pf~~~~~-----------------~~~~~~~~~~~---------  100 (225)
                      ....+.++|||||||++|+|++|.           ++|.+...                 ...+..++..+         
T Consensus       226 ~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~  305 (432)
T 3n9x_A          226 QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLK  305 (432)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred             CCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHH
Confidence            443345599999999999999844           34433221                 01111111110         


Q ss_pred             -----------hcccccCC-----CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327          101 -----------LSVHYSIP-----GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       101 -----------~~~~~~~~-----~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                                 .......+     .++.+++++.+||++||..||.+|||+.++|+||||.....
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          306 NINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             hccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence                       00000000     11357999999999999999999999999999999987543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=6.2e-32  Score=229.89  Aligned_cols=141  Identities=39%  Similarity=0.687  Sum_probs=117.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||++............+||+.|+|||++.+..+.+.++|||||||++|+|++|
T Consensus       135 ~givHrDLkp~NIll~~~~--~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG  212 (476)
T 2y94_A          135 HMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG  212 (476)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCcccccHHHEEEecCC--CeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhC
Confidence            4899999999999998776  79999999998765555556678999999999998887766669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      +.||.......    ...++....+..|  ..+++++.+||.+||..||.+|||+.++++||||.+..+
T Consensus       213 ~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          213 TLPFDDDHVPT----LFKKICDGIFYTP--QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             SCSSCCSSSHH----HHHHHHTTCCCCC--TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             CCCCCCCCHHH----HHHHHhcCCcCCC--ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            99998765533    3334444444433  348999999999999999999999999999999987544

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=4e-32  Score=223.24  Aligned_cols=137  Identities=35%  Similarity=0.619  Sum_probs=112.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++.... .......+||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       140 ~givHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  216 (353)
T 2i0e_A          140 KGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLA  216 (353)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTH-HHHHHHHHHHHHHHH
T ss_pred             CCEEeccCCHHHEEEcCCC--cEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCc-ccccchHHHHHHHHc
Confidence            4899999999999998777  799999999986432 233445689999999999988887644 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      |+.||.+....    .....+.......|.  .++.++++||.+||..||.+||+     +.++++||||..
T Consensus       217 G~~Pf~~~~~~----~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          217 GQAPFEGEDED----ELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             SSCSSCCSSHH----HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             CCCCCCCCCHH----HHHHHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            99999875443    334444444444443  58999999999999999999995     699999999974

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=2.3e-32  Score=224.63  Aligned_cols=145  Identities=25%  Similarity=0.406  Sum_probs=112.7

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++. ++  .+||+|||+++............||+.|+|||++.+....+.++|||||||++|+|++
T Consensus       150 ~~ivH~Dlkp~NIll~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~  227 (360)
T 3e3p_A          150 VNVCHRDIKPHNVLVNEADG--TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML  227 (360)
T ss_dssp             TCCBCSCCCGGGEEEETTTT--EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCeecCcCCHHHEEEeCCCC--cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            48999999999999985 44  7999999999876655555566899999999999766644556999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc-------------c-------------CCCCCCCCHHHHHHHHhhcccCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY-------------S-------------IPGYVRVSLECRHLLSRIFVADPEKRI  133 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~-------------~-------------~~~~~~~~~~~~~li~~~l~~dP~~R~  133 (225)
                      |+.||.+......+..+.........             .             .......+.++++||.+||++||.+||
T Consensus       228 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  307 (360)
T 3e3p_A          228 GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERM  307 (360)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccC
Confidence            99999887665554444432211000             0             001112567899999999999999999


Q ss_pred             CHHHHhcCcccCcC
Q 027327          134 TIPEIQKHPWFLKN  147 (225)
Q Consensus       134 s~~eil~hp~~~~~  147 (225)
                      |+.++++||||.+.
T Consensus       308 t~~e~l~hp~f~~~  321 (360)
T 3e3p_A          308 KPYEALCHPYFDEL  321 (360)
T ss_dssp             CHHHHTTSGGGGGG
T ss_pred             CHHHHhcCcccccc
Confidence            99999999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=6e-32  Score=219.65  Aligned_cols=145  Identities=24%  Similarity=0.406  Sum_probs=106.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++...... ......+|+.|+|||++.+....+.++|||||||++|+|++
T Consensus       119 ~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  196 (324)
T 3mtl_A          119 QKVLHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT  196 (324)
T ss_dssp             TTEEESSCCGGGEEECTTC--CEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCcCHHHEEECCCC--CEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987544322 22345789999999999775444455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc-cCC-----------------------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY-SIP-----------------------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~-----------------------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||.+.........+......... .++                       ....++.++++||.+||++||.+|||+
T Consensus       197 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  276 (324)
T 3mtl_A          197 GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA  276 (324)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCH
Confidence            99999886655544444332211110 000                       112468899999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .++++||||.+.
T Consensus       277 ~e~l~hp~f~~~  288 (324)
T 3mtl_A          277 EDAMKHPFFLSL  288 (324)
T ss_dssp             HHHTTSGGGGGG
T ss_pred             HHHhcChhhhhc
Confidence            999999999764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.8e-33  Score=226.56  Aligned_cols=142  Identities=27%  Similarity=0.549  Sum_probs=113.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++....+.+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       121 ~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~~ll~g  199 (321)
T 1tki_A          121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA-TDMWSLGTLVYVLLSG  199 (321)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHH-HHHHHHHHHHHHHHHS
T ss_pred             CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCch-hhHHHHHHHHHHHHhC
Confidence            489999999999999874344799999999987655444445679999999999987776544 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.......    ....+....+..+  .+..++.++++||.+||..||.+|||+.++++||||.+.
T Consensus       200 ~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          200 INPFLAETNQQ----IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             SCTTCCSSHHH----HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CCCCcCCCHHH----HHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            99998755433    3333333333322  224689999999999999999999999999999999754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=8e-32  Score=227.58  Aligned_cols=141  Identities=39%  Similarity=0.699  Sum_probs=112.2

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+|||++.. ..+.+||+|||++........ .....||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       129 ~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~-~DIwSlGvilyell  207 (444)
T 3soa_A          129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKP-VDLWACGVILYILL  207 (444)
T ss_dssp             TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHH
T ss_pred             CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCc-cccHHHHHHHHHHH
Confidence            489999999999999753 223799999999976544332 234579999999999988777654 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +|..||.+.....    ....+....+  ..+.+..+++++++||.+||..||.+|||+.++|+||||..
T Consensus       208 ~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          208 VGYPPFWDEDQHR----LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HSSCSCCCSSHHH----HHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             hCCCCCCCccHHH----HHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            9999998755433    2333333333  33444578999999999999999999999999999999964

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=2.5e-32  Score=229.97  Aligned_cols=147  Identities=27%  Similarity=0.356  Sum_probs=109.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|||||||||+|||++.++...+||+|||+++...  ......+||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       219 ~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltG  295 (429)
T 3kvw_A          219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYTYIQSRFYRAPEVILGARYGMP-IDMWSLGCILAELLTG  295 (429)
T ss_dssp             HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT--CCCCSSCSCGGGCCHHHHHTBCCCTH-HHHHHHHHHHHHHHHS
T ss_pred             CCeecCCCCHHHeEEccCCCcceEEeecccceecC--CcccccCCCCCccChHHHhCCCCCch-HHHHhHHHHHHHHHhC
Confidence            38999999999999988774459999999997543  23345679999999999988888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccc----------------cCC-----------------------------C------
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHY----------------SIP-----------------------------G------  109 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~----------------~~~-----------------------------~------  109 (225)
                      ..||.+......+..+.........                ..+                             .      
T Consensus       296 ~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (429)
T 3kvw_A          296 YPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGN  375 (429)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHh
Confidence            9999887665554444332111000                000                             0      


Q ss_pred             --CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327          110 --YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus       110 --~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                        ....++.+++||++||++||.+|||+.|+|+||||++..+.
T Consensus       376 ~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~  418 (429)
T 3kvw_A          376 ALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK  418 (429)
T ss_dssp             HTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-----
T ss_pred             hccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCC
Confidence              01236789999999999999999999999999999876543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=3.3e-32  Score=224.52  Aligned_cols=141  Identities=35%  Similarity=0.651  Sum_probs=113.3

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++..+ ...+||+|||++.............||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       147 ~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~~ll~  225 (362)
T 2bdw_A          147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLV  225 (362)
T ss_dssp             TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTH-HHHHHHHHHHHHHHH
T ss_pred             CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCch-hhHHHHHHHHHHHHH
Confidence            4899999999999997643 23699999999987665555556689999999999988777654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |..||.+.....    ....+....+..  +.+..+++++++||.+||..||.+|||+.++++||||..
T Consensus       226 g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          226 GYPPFWDEDQHR----LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             SSCSSCCSSHHH----HHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             CCCCCCCCCHHH----HHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            999998755432    233333333332  333468999999999999999999999999999999964

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=4.9e-32  Score=222.13  Aligned_cols=141  Identities=33%  Similarity=0.592  Sum_probs=111.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  ++||+|||+++.... .......+||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       129 ~~ivHrDlkp~NIll~~~g--~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  205 (345)
T 3a8x_A          129 RGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS-VDWWALGVLMFEMMA  205 (345)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCceecCCCHHHEEECCCC--CEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChH-HhHHHHHHHHHHHHh
Confidence            4899999999999998776  799999999985332 233445689999999999988877644 999999999999999


Q ss_pred             CCCCCCCCCCh-----hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH------HHHhcCcccCc
Q 027327           80 GAYPFEDPEDP-----RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI------PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~------~eil~hp~~~~  146 (225)
                      |+.||......     .........+.......|.  .++.++++||.+||..||.+||++      .++++||||..
T Consensus       206 g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          206 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             SSCTTTTTTC-------CHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             CCCCcCCcccccccccccHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            99999753221     1112233344444444443  589999999999999999999995      89999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=2.4e-32  Score=223.94  Aligned_cols=137  Identities=39%  Similarity=0.706  Sum_probs=112.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++.... .......+||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       137 ~~ivHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  213 (345)
T 1xjd_A          137 KGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHS-VDWWSFGVLLYEMLI  213 (345)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCeEeCCCChhhEEECCCC--CEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCCh-hhhHHHHHHHHHHhc
Confidence            4899999999999998776  799999999985432 233445679999999999988887654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHH-HHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIP-EIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~-eil~hp~~~~  146 (225)
                      |+.||.+....    .....+.......+.  .++.++++||.+||..||.+||++. ++++||||..
T Consensus       214 g~~Pf~~~~~~----~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          214 GQSPFHGQDEE----ELFHSIRMDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             SSCSSCCSSHH----HHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             CCCCCCCCCHH----HHHHHHHhCCCCCCc--ccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence            99999875543    333344444444443  4899999999999999999999998 9999999975

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=9.5e-32  Score=218.07  Aligned_cols=136  Identities=39%  Similarity=0.662  Sum_probs=112.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  ++||+|||+++....  .....+||+.|+|||++.+..++.+ +|+|||||++|+|++|
T Consensus       125 ~~ivHrDlkp~NIll~~~g--~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~g  199 (318)
T 1fot_A          125 KDIIYRDLKPENILLDKNG--HIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKS-IDWWSFGILIYEMLAG  199 (318)
T ss_dssp             TTEECCCCCGGGEEECTTS--CEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTT-HHHHHHHHHHHHHHHS
T ss_pred             CCccccCCChheEEEcCCC--CEEEeecCcceecCC--ccccccCCccccCHhHhcCCCCCcc-cchhhhHHHHHHHHhC
Confidence            4899999999999998776  799999999975432  2345679999999999988888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      +.||......    .....+.......|  ..++.++++||++||..||.+||     +++++++||||...
T Consensus       200 ~~pf~~~~~~----~~~~~i~~~~~~~p--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          200 YTPFYDSNTM----KTYEKILNAELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             SCTTCCSSHH----HHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CCCCCCCCHH----HHHHHHHhCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            9999875543    33344444444444  35899999999999999999999     89999999999753

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=2.9e-32  Score=226.65  Aligned_cols=142  Identities=30%  Similarity=0.541  Sum_probs=113.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.+..+.+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       168 ~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg  246 (387)
T 1kob_A          168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY-TDMWAIGVLGYVLLSG  246 (387)
T ss_dssp             TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHH-HHHHHHHHHHHHHHHS
T ss_pred             CCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCc-ccEeeHhHHHHHHHhC
Confidence            489999999999999765445799999999987655444445579999999999988777654 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.+......    ...+....+.  ......++.++++||.+||..||.+|||+.++++||||...
T Consensus       247 ~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          247 LSPFAGEDDLET----LQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             CCSSCCSSHHHH----HHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             CCCCCCCCHHHH----HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence            999987554332    2233332222  22334689999999999999999999999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=222.55  Aligned_cols=140  Identities=29%  Similarity=0.499  Sum_probs=112.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~l   77 (225)
                      .|||||||||+|||++.++  ++||+|||+++...........+||+.|+|||++.+   ..++.+ +|||||||++|+|
T Consensus       134 ~givHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~-~DiwSlG~il~el  210 (384)
T 4fr4_A          134 QRIIHRDMKPDNILLDEHG--HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFA-VDWWSLGVTAYEL  210 (384)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTT-HHHHHHHHHHHHH
T ss_pred             CCceeccCcHHHeEECCCC--CEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCcc-ceeechHHHHHHH
Confidence            4899999999999998777  799999999987665555667789999999999964   335444 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-HHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-IPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-~~eil~hp~~~~  146 (225)
                      ++|+.||....... .......+.......|  ..++..+.+||.+||..||.+||+ ++++++||||..
T Consensus       211 ltG~~Pf~~~~~~~-~~~~~~~~~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          211 LRGRRPYHIRSSTS-SKEIVHTFETTVVTYP--SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             HHSSCSSCCCTTSC-HHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             HhCCCCCCCCCCcc-HHHHHHHHhhcccCCC--CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence            99999997544322 2333334444433333  358999999999999999999998 899999999964

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=4.6e-32  Score=226.85  Aligned_cols=141  Identities=34%  Similarity=0.559  Sum_probs=112.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCc----cCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKE----YDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~----~~~~~~DiwslG~il   74 (225)
                      +|||||||||+|||++.++  ++||+|||+++......  ...+.+||+.|+|||++.+..    ++ .++|||||||++
T Consensus       187 ~givHrDLKp~NILl~~~g--~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~-~~~DiwSlGvil  263 (410)
T 3v8s_A          187 MGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG-RECDWWSVGVFL  263 (410)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEE-THHHHHHHHHHH
T ss_pred             CCeEeccCCHHHeeECCCC--CEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCC-CcceEecchHHH
Confidence            5899999999999998777  79999999997654332  234568999999999997654    43 459999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLK  146 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~  146 (225)
                      |+|++|+.||.+......+..+.....  ....|....++.++++||++||..+|.+  |+++++|++||||+.
T Consensus       264 yell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          264 YEMLVGDTPFYADSLVGTYSKIMNHKN--SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHTHHH--HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred             HHHHhCCCCCCCCChhhHHHHHHhccc--cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence            999999999987655444433332221  2344444568999999999999999988  999999999999975

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=4.1e-32  Score=220.86  Aligned_cols=142  Identities=35%  Similarity=0.645  Sum_probs=112.6

Q ss_pred             CceEecCCCCCcEEEcCCC--CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK--APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~--~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  ...+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       133 ~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~~ll  211 (326)
T 2y0a_A          133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILL  211 (326)
T ss_dssp             TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTH-HHHHHHHHHHHHHH
T ss_pred             CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcH-HHHHHHHHHHHHHH
Confidence            4899999999999997654  22699999999987655555556689999999999987777655 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|..||.+......+.    .+.......+  .+..++..+++||.+||..||.+|||+.++++||||...
T Consensus       212 ~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          212 SGASPFLGDTKQETLA----NVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             HSCCSSCCSSHHHHHH----HHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HCcCCCCCCCHHHHHH----HHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence            9999998755433222    2222222222  123578999999999999999999999999999999764

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=1.3e-31  Score=219.73  Aligned_cols=147  Identities=24%  Similarity=0.332  Sum_probs=109.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-----CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-----HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-----~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+|||++.++  .+||+|||+++....     ........||+.|+|||++.+....+.++|||||||++|
T Consensus       143 ~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  220 (351)
T 3mi9_A          143 NKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA  220 (351)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred             CCeeCCCCCHHHEEEcCCC--CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHH
Confidence            4899999999999998776  799999999975432     122234578999999999976554445699999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhccccc-CCCCC-------------------------CCCHHHHHHHHhhcccCC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IPGYV-------------------------RVSLECRHLLSRIFVADP  129 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------------------~~~~~~~~li~~~l~~dP  129 (225)
                      +|++|..||.+.........+.......... .+...                         ..++.+++||.+||..||
T Consensus       221 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  300 (351)
T 3mi9_A          221 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP  300 (351)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSG
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCCh
Confidence            9999999998766544443333322111111 01000                         026779999999999999


Q ss_pred             CCCCCHHHHhcCcccCcCCC
Q 027327          130 EKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       130 ~~R~s~~eil~hp~~~~~~~  149 (225)
                      .+|||+.++++||||.....
T Consensus       301 ~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          301 AQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             GGSCCHHHHHTSGGGGSSSC
T ss_pred             hhCCCHHHHhCCCCcCCCCC
Confidence            99999999999999976433

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=4.2e-32  Score=219.38  Aligned_cols=135  Identities=25%  Similarity=0.299  Sum_probs=102.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|||||||||+|||++.++  .+||+|||++.............||+.|+|||++.+ .++ .++|||||||++|+|++|
T Consensus       176 ~~ivH~Dikp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~-~~~DiwslG~il~el~~g  251 (311)
T 3p1a_A          176 QGLVHLDVKPANIFLGPRG--RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYG-TAADVFSLGLTILEVACN  251 (311)
T ss_dssp             TTEECCCCSGGGEEECGGG--CEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCS-THHHHHHHHHHHHHHHHT
T ss_pred             CCEecCCCCHHHEEECCCC--CEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCC-chhhHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999986655555555679999999999875 555 459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ..||...   ..    ...+............++.++.+||.+||..||.+|||+.++++||||++
T Consensus       252 ~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          252 MELPHGG---EG----WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             CCCCSSH---HH----HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             CCCCCCc---cH----HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            7776542   11    11222211111112357899999999999999999999999999999975

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=1.2e-31  Score=221.47  Aligned_cols=146  Identities=26%  Similarity=0.395  Sum_probs=102.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++....  .....+||+.|+|||++.+....+.++|||||||++|+|++|
T Consensus       151 ~givH~Dlkp~NIll~~~~--~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  226 (367)
T 2fst_X          151 ADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  226 (367)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCeeeCCCCHhhEEECCCC--CEEEeeccccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999975432  234457999999999998743334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc-------------------cccCC------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV-------------------HYSIP------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||.+......+..+...+...                   ....+      .+...++.+.+||.+||..||.+|||+
T Consensus       227 ~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~  306 (367)
T 2fst_X          227 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA  306 (367)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCH
Confidence            99998876555444443322110                   00001      012468899999999999999999999


Q ss_pred             HHHhcCcccCcCCCc
Q 027327          136 PEIQKHPWFLKNLPI  150 (225)
Q Consensus       136 ~eil~hp~~~~~~~~  150 (225)
                      .++|+||||......
T Consensus       307 ~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          307 AQALAHAYFAQYHDP  321 (367)
T ss_dssp             HHHHTSGGGTTTCCG
T ss_pred             HHHhcChhhhhccCC
Confidence            999999999875443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=1.9e-31  Score=219.97  Aligned_cols=147  Identities=28%  Similarity=0.408  Sum_probs=112.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||+++......    .....+||+.|+|||++.+....+.++|||||||++|+
T Consensus       147 ~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  224 (364)
T 3qyz_A          147 ANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE  224 (364)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHH
T ss_pred             CCeecCCCChHhEEECCCC--CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHH
Confidence            4899999999999998776  69999999997544322    12345799999999987655533455999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccc----------------cCC---------CCCCCCHHHHHHHHhhcccCCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHY----------------SIP---------GYVRVSLECRHLLSRIFVADPEK  131 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~----------------~~~---------~~~~~~~~~~~li~~~l~~dP~~  131 (225)
                      |++|+.||.+......+..+.........                ..+         ....++.++.+||.+||.+||.+
T Consensus       225 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  304 (364)
T 3qyz_A          225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK  304 (364)
T ss_dssp             HHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTT
T ss_pred             HHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhh
Confidence            99999999887765555444332111100                000         01347889999999999999999


Q ss_pred             CCCHHHHhcCcccCcCCC
Q 027327          132 RITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       132 R~s~~eil~hp~~~~~~~  149 (225)
                      |||+.++++||||.+...
T Consensus       305 R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          305 RIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             SCCHHHHHTSGGGTTTCC
T ss_pred             CCCHHHHhcCcchhhccC
Confidence            999999999999987644

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=7.5e-32  Score=219.10  Aligned_cols=144  Identities=37%  Similarity=0.645  Sum_probs=113.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++.....   .......||+.|+|||++.+..+.+.++|||||||++|+|
T Consensus       124 ~givH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  201 (323)
T 3tki_A          124 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM  201 (323)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHH
T ss_pred             CCccccccchHHEEEeCCC--CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHH
Confidence            4899999999999998776  7999999999754322   2233557999999999998877755569999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ++|+.||..........   ..........+....++..+.+||.+||..||.+|||+.++++||||.+...
T Consensus       202 l~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          202 LAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             HHSSCSCSSSCTTSHHH---HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HhCCCCCCCCchHHHHH---HHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence            99999998765432222   1222223333444568999999999999999999999999999999986543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=7.4e-32  Score=228.10  Aligned_cols=138  Identities=36%  Similarity=0.628  Sum_probs=111.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  .+||+|||+++.... .......+||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       268 ~giiHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  344 (446)
T 4ejn_A          268 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMC  344 (446)
T ss_dssp             TCCCCCCCCGGGEEECSSS--CEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTH-HHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCHHHEEECCCC--CEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCc-cchhhhHHHHHHHhh
Confidence            4899999999999998776  799999999975332 233445679999999999988888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||.+....    .....+.......|  ..+++++.+||.+||.+||.+||     ++.++++||||...
T Consensus       345 g~~Pf~~~~~~----~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          345 GRLPFYNQDHE----KLFELILMEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             SSCSSCCSSHH----HHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCCCCHH----HHHHHHHhCCCCCC--ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            99999875543    23333344444444  35899999999999999999999     99999999999753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=4.1e-32  Score=234.76  Aligned_cols=141  Identities=33%  Similarity=0.523  Sum_probs=115.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|||||||||+|||++.++  ++||+|||+++...........+||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       305 ~gIvHrDLKPeNILld~~g--~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~-~DiwSLGvilyeLltG  381 (576)
T 2acx_A          305 ERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS-PDWWALGCLLYEMIAG  381 (576)
T ss_dssp             TTEECCCCCGGGEEECTTS--CEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSH-HHHHHHHHHHHHHHHS
T ss_pred             CCEeccCCchheEEEeCCC--CeEEEecccceecccCccccccCCCccccCHHHHcCCCCCcc-chHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999987655544455689999999999988887655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~  146 (225)
                      +.||...........+...+.......+  ..+++++++||.+||..||.+||     ++.++++||||..
T Consensus       382 ~~PF~~~~~~~~~~~i~~~i~~~~~~~p--~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          382 QSPFQQRKKKIKREEVERLVKEVPEEYS--ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             SCSSSCSSSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             CCCCcccccchhHHHHHHHhhcccccCC--ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            9999875543333334444444333333  45899999999999999999999     7899999999975

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=2.3e-32  Score=226.23  Aligned_cols=142  Identities=32%  Similarity=0.585  Sum_probs=113.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||+..+..+.+||+|||+++...........+||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       206 ~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~elltg  284 (373)
T 2x4f_A          206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFP-TDMWSVGVIAYMLLSG  284 (373)
T ss_dssp             TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHH-HHHHHHHHHHHHHHHS
T ss_pred             CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcH-HhHHHHHHHHHHHHhC
Confidence            489999999999999543334799999999987655555556679999999999987776544 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.+......+..    +....+..  ..+..+++++++||.+||..||.+|||+.++++||||...
T Consensus       285 ~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          285 LSPFLGDNDAETLNN----ILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             SCTTCCSSHHHHHHH----HHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             CCCCCCCCHHHHHHH----HHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            999987655433333    33322222  2234689999999999999999999999999999999753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=7.1e-32  Score=220.28  Aligned_cols=135  Identities=32%  Similarity=0.488  Sum_probs=111.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++............||+.|+|||++.+..+.+.++|||||||++|+|++|
T Consensus       149 ~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  226 (335)
T 3dls_A          149 KDIIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE  226 (335)
T ss_dssp             TTEECSCCSGGGEEECTTS--CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHS
T ss_pred             CCeEEeccCHHHEEEcCCC--cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhC
Confidence            4899999999999998776  79999999998765555555667999999999998888756668999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ..||.....          ....  .......++.++.+||.+||..||.+|||+.++++||||.+...
T Consensus       227 ~~pf~~~~~----------~~~~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~  283 (335)
T 3dls_A          227 ENPFCELEE----------TVEA--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN  283 (335)
T ss_dssp             SCSCSSGGG----------GTTT--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred             CCchhhHHH----------HHhh--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence            999975221          1111  12223358999999999999999999999999999999987543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=9.3e-32  Score=218.78  Aligned_cols=144  Identities=30%  Similarity=0.520  Sum_probs=109.3

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++... .+.+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       150 ~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~~ll~  228 (327)
T 3lm5_A          150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTA-TDMWNIGIIAYMLLT  228 (327)
T ss_dssp             TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTH-HHHHHHHHHHHHHHH
T ss_pred             CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999997621 23799999999987655545556679999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+.||...........+..  ....+..+....++..+++||.+||..||.+|||+.++++||||++.
T Consensus       229 g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~  294 (327)
T 3lm5_A          229 HTSPFVGEDNQETYLNISQ--VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW  294 (327)
T ss_dssp             SSCSSCCSSHHHHHHHHHH--TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred             CCCCCCCCCchHHHHHHHh--cccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence            9999987655433322221  12223333445689999999999999999999999999999999765

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=1.7e-31  Score=236.01  Aligned_cols=137  Identities=35%  Similarity=0.618  Sum_probs=114.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC-CCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-LHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++... ........+||+.|+|||++.+..|+.+ +|||||||++|+|++
T Consensus       461 ~gIiHrDLKp~NILl~~~g--~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~-~DvwSlGvilyellt  537 (674)
T 3pfq_A          461 KGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLA  537 (674)
T ss_dssp             TSEECCCCCSTTEEECSSS--CEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTH-HHHHHHHHHHHHHHH
T ss_pred             CCeEeccCChhhEEEcCCC--cEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCcc-ceEechHHHHHHHHc
Confidence            5899999999999998777  79999999998533 2333455689999999999988888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH-----HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI-----PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~-----~eil~hp~~~~  146 (225)
                      |+.||.+...    ......+......+|.  .++.++++||++||.+||.+||++     ++|++||||..
T Consensus       538 G~~Pf~~~~~----~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          538 GQAPFEGEDE----DELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             SSCSSCCSSH----HHHHHHHHSSCCCCCT--TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             CCCCCCCCCH----HHHHHHHHhCCCCCCc--cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence            9999987554    3444555555555554  589999999999999999999997     99999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=2e-31  Score=216.65  Aligned_cols=146  Identities=24%  Similarity=0.357  Sum_probs=109.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++. .+||+|||+++............+++.|+|||++.+....+.++|||||||++|+|++|
T Consensus       149 ~~ivH~Dikp~Nil~~~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g  227 (330)
T 3nsz_A          149 MGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR  227 (330)
T ss_dssp             TTEECCCCSGGGEEEETTTT-EEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCeeeCCCCHHHEEEcCCCC-EEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhC
Confidence            48999999999999985543 69999999998766555556678999999999998744444559999999999999999


Q ss_pred             CCCCCCCCChhH-HHHHHHHH---------hcccc----------------------cCCCCCCCCHHHHHHHHhhcccC
Q 027327           81 AYPFEDPEDPRN-FKTTIQRI---------LSVHY----------------------SIPGYVRVSLECRHLLSRIFVAD  128 (225)
Q Consensus        81 ~~pf~~~~~~~~-~~~~~~~~---------~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~d  128 (225)
                      +.||........ +.......         .....                      .......++.++++||.+||.+|
T Consensus       228 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  307 (330)
T 3nsz_A          228 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD  307 (330)
T ss_dssp             CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSS
T ss_pred             CCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCC
Confidence            999965443221 11111100         00000                      00111227899999999999999


Q ss_pred             CCCCCCHHHHhcCcccCcC
Q 027327          129 PEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       129 P~~R~s~~eil~hp~~~~~  147 (225)
                      |.+|||+.++++||||...
T Consensus       308 P~~Rpta~e~l~hp~f~~~  326 (330)
T 3nsz_A          308 HQSRLTAREAMEHPYFYTV  326 (330)
T ss_dssp             GGGSCCHHHHHTSGGGTTC
T ss_pred             cccCCCHHHHhcCccHhhh
Confidence            9999999999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=2.3e-32  Score=220.14  Aligned_cols=137  Identities=25%  Similarity=0.322  Sum_probs=93.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----CCCCcccCCCCCccccccCCc------cCCCcccHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----QPKSTVGTPAYIAPEVLSRKE------YDGKIADVWSC   70 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~l~~~~------~~~~~~Diwsl   70 (225)
                      |||||||||+|||++.++  ++||+|||+|+......     .....+||+.|||||++.+..      |+ .++|||||
T Consensus       128 ~IiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~-~k~DVwS~  204 (303)
T 3hmm_A          128 AIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAM  204 (303)
T ss_dssp             CEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHH-HHHHHHHH
T ss_pred             CEeeccCCcccEEECCCC--CEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccC-hhHhhhhH
Confidence            899999999999998877  79999999997543322     123457999999999997542      33 35999999


Q ss_pred             HHHHHHHHhCCCCCCCCCC----------hh-HHHHHHHHHhccccc--CCCC---CCCCHHHHHHHHhhcccCCCCCCC
Q 027327           71 GVTLYVMLVGAYPFEDPED----------PR-NFKTTIQRILSVHYS--IPGY---VRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~----------~~-~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      ||++|||++|..||.....          .. ........+......  .|..   ...+..+.+|+.+||..||.+|||
T Consensus       205 Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt  284 (303)
T 3hmm_A          205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT  284 (303)
T ss_dssp             HHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred             HHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcC
Confidence            9999999999876643211          11 112222222222221  1111   012246789999999999999999


Q ss_pred             HHHHhcC
Q 027327          135 IPEIQKH  141 (225)
Q Consensus       135 ~~eil~h  141 (225)
                      +.+|++.
T Consensus       285 ~~ei~~~  291 (303)
T 3hmm_A          285 ALRIKKT  291 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.8e-31  Score=221.55  Aligned_cols=144  Identities=27%  Similarity=0.424  Sum_probs=113.4

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++. ++  .+||+|||+++............+|+.|+|||++.+....+.++||||+||++|+|++
T Consensus       160 ~gi~H~Dikp~Nil~~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  237 (383)
T 3eb0_A          160 LGICHRDIKPQNLLVNSKDN--TLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL  237 (383)
T ss_dssp             TTEECSCCCGGGEEEETTTT--EEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             CcCccCccCHHHEEEcCCCC--cEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence            48999999999999974 44  7999999999876655555667899999999998876534455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc----------c---ccCC----------CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV----------H---YSIP----------GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~----------~---~~~~----------~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||.+......+..++......          .   ...+          ....++..+++||.+||.+||.+|||+.
T Consensus       238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  317 (383)
T 3eb0_A          238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY  317 (383)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            999998876665555544322111          0   0011          1224788999999999999999999999


Q ss_pred             HHhcCcccCc
Q 027327          137 EIQKHPWFLK  146 (225)
Q Consensus       137 eil~hp~~~~  146 (225)
                      ++++||||..
T Consensus       318 e~l~hp~f~~  327 (383)
T 3eb0_A          318 EAMAHPFFDH  327 (383)
T ss_dssp             HHHTSGGGHH
T ss_pred             HHhcCHHHHH
Confidence            9999999964

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=1.4e-31  Score=230.60  Aligned_cols=141  Identities=33%  Similarity=0.516  Sum_probs=114.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++........ ...+||+.|+|||++.+..|+.+ +|||||||++|+|++
T Consensus       308 ~gIvHrDLKP~NILl~~~g--~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~-~DiwSlGvilyellt  384 (543)
T 3c4z_A          308 RNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS-VDYFALGVTLYEMIA  384 (543)
T ss_dssp             TTEECCCCCGGGEEECTTS--CEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             cCCcccCCChHHEEEeCCC--CEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChH-HhcCcchHHHHHHHh
Confidence            4899999999999998777  7999999999865444332 34589999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      |+.||...........+...+.......|  ..++..+++||++||..||.+||+     +.++++||||..
T Consensus       385 G~~PF~~~~~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          385 ARGPFRARGEKVENKELKQRVLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             SSCSSCCTTCCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             CCCCCCCCccchhHHHHHHHHhhcccCCC--cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            99999876443333444555555444444  358999999999999999999996     589999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3e-31  Score=217.32  Aligned_cols=145  Identities=28%  Similarity=0.350  Sum_probs=112.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++...... ......+|+.|+|||++.+....+.++|||||||++|+|++
T Consensus       131 ~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  208 (346)
T 1ua2_A          131 HWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL  208 (346)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCEECCCCCHHHEEEcCCC--CEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHH
Confidence            4899999999999998776  79999999998654332 33445789999999999765544455999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc-cCCC---------------------CCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY-SIPG---------------------YVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~---------------------~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      |.+||.+......+..+......... .++.                     ...++..+++||.+||..||.+|||+.+
T Consensus       209 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  288 (346)
T 1ua2_A          209 RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQ  288 (346)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHH
Confidence            99999887665555554443321110 0000                     1346789999999999999999999999


Q ss_pred             HhcCcccCcC
Q 027327          138 IQKHPWFLKN  147 (225)
Q Consensus       138 il~hp~~~~~  147 (225)
                      +++||||.+.
T Consensus       289 ll~h~~f~~~  298 (346)
T 1ua2_A          289 ALKMKYFSNR  298 (346)
T ss_dssp             HHTSGGGTSS
T ss_pred             HhcChhhhcC
Confidence            9999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=1.7e-31  Score=219.26  Aligned_cols=135  Identities=31%  Similarity=0.560  Sum_probs=111.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  ++||+|||+++....  .....+||+.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       160 ~~ivHrDlkp~NIll~~~g--~~kL~DFg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~g  234 (350)
T 1rdq_E          160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKA-VDWWALGVLIYEMAAG  234 (350)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHHS
T ss_pred             CCcccccCccceEEECCCC--CEEEcccccceeccC--CcccccCCccccCHHHhcCCCCCCc-CCEecccHhHhHHhhC
Confidence            4899999999999998776  799999999986533  2345679999999999988887654 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      +.||......    .....+.......|  ..++.++++||.+||..||.+||+     +.+|++||||..
T Consensus       235 ~~Pf~~~~~~----~~~~~i~~~~~~~p--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          235 YPPFFADQPI----QIYEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             SCSSCCSSHH----HHHHHHHHCCCCCC--TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             CCCCCCCCHH----HHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence            9999875443    33344444444444  358999999999999999999998     999999999975

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=6.8e-31  Score=217.22  Aligned_cols=144  Identities=28%  Similarity=0.406  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC-CccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR-KEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++....  ......+|+.|+|||++.+ ..++ .++|||||||++|+|++
T Consensus       163 ~~ivH~Dikp~NIll~~~~--~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~-~~~DiwslG~il~el~~  237 (371)
T 4exu_A          163 AGVVHRDLKPGNLAVNEDC--ELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYN-QTVDIWSVGCIMAEMLT  237 (371)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCC-TTHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCcCHHHeEECCCC--CEEEEecCccccccc--CcCCcccCccccCHHHhcCCCCCC-cHHhHHHHHHHHHHHHh
Confidence            4899999999999998776  799999999975432  2334578999999999987 4454 45999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc-------------------ccCC------CCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH-------------------YSIP------GYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~-------------------~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      |+.||.+......+..+........                   ...+      ....+++.+++||.+||+.||.+|||
T Consensus       238 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  317 (371)
T 4exu_A          238 GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT  317 (371)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCC
Confidence            9999987665444444332211100                   0000      11346899999999999999999999


Q ss_pred             HHHHhcCcccCcCCC
Q 027327          135 IPEIQKHPWFLKNLP  149 (225)
Q Consensus       135 ~~eil~hp~~~~~~~  149 (225)
                      +.++++||||.....
T Consensus       318 ~~ell~hp~f~~~~~  332 (371)
T 4exu_A          318 AAQALTHPFFEPFRD  332 (371)
T ss_dssp             HHHHHTSGGGTTTCC
T ss_pred             HHHHhcCcccccCCC
Confidence            999999999986543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=2.1e-31  Score=212.12  Aligned_cols=144  Identities=35%  Similarity=0.633  Sum_probs=114.5

Q ss_pred             CceEecCCCCCcEEEcCCCC-CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~-~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++. ..+||+|||++.............|++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       124 ~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~l~~  202 (284)
T 3kk8_A          124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLV  202 (284)
T ss_dssp             TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcc-cchHHHHHHHHHHHH
Confidence            48999999999999976542 3599999999976655555556679999999999988877654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc--ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH--YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+.||..........    .+....  ...+....+++++.+||.+||+.||.+|||+.++++||||.+...
T Consensus       203 g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          203 GYPPFWDEDQHRLYA----QIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER  270 (284)
T ss_dssp             SSCSSCCSSHHHHHH----HHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred             CCCCCCCCchhHHHH----HHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence            999998755433222    222222  233334568999999999999999999999999999999976533

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=1.7e-31  Score=220.95  Aligned_cols=137  Identities=36%  Similarity=0.601  Sum_probs=111.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCC-CCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSV-LHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++... ........+||+.|+|||++.+..++.+ +|+|||||++|+|++
T Consensus       158 ~givHrDlkp~NIll~~~g--~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  234 (373)
T 2r5t_A          158 LNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRT-VDWWCLGAVLYEMLY  234 (373)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTH-HHHHHHHHHHHHHHH
T ss_pred             CCceecCCCHHHEEECCCC--CEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCch-hhhHHHHHHHHHHHc
Confidence            5899999999999998776  79999999998533 2334456689999999999988877654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCH----HHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITI----PEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~----~eil~hp~~~~  146 (225)
                      |..||.......    ....+.......+  ..++..+++||.+||..||.+||++    .++++||||..
T Consensus       235 G~~Pf~~~~~~~----~~~~i~~~~~~~~--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          235 GLPPFYSRNTAE----MYDNILNKPLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             SSCTTCCSBHHH----HHHHHHHSCCCCC--SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             CCCCCCCCCHHH----HHHHHHhcccCCC--CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence            999998755433    3334444443333  3589999999999999999999986    69999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=2.7e-31  Score=223.82  Aligned_cols=141  Identities=29%  Similarity=0.565  Sum_probs=110.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCcccccc-----CCccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLS-----RKEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~-----~~~~~~~~~DiwslG~i   73 (225)
                      +|||||||||+|||++.++  ++||+|||+++.......  ....+||+.|+|||++.     ...|+ .++|||||||+
T Consensus       194 ~giiHrDLKp~NILl~~~g--~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~-~~~DvwSlGvi  270 (437)
T 4aw2_A          194 LHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYG-PECDWWSLGVC  270 (437)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEEC-THHHHHHHHHH
T ss_pred             CCeEecccCHHHeeEcCCC--CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCC-CcCeeHHHHHH
Confidence            5899999999999998777  799999999975543322  23357999999999986     34454 45999999999


Q ss_pred             HHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCC-CCCCHHHHHHHHhhcccCCCC--CCCHHHHhcCcccCc
Q 027327           74 LYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGY-VRVSLECRHLLSRIFVADPEK--RITIPEIQKHPWFLK  146 (225)
Q Consensus        74 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~--R~s~~eil~hp~~~~  146 (225)
                      +|+|++|+.||.+......+..+......  ...|.. ..+++++++||++||..+|++  |++++++++||||..
T Consensus       271 l~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          271 MYEMLYGETPFYAESLVETYGKIMNHKER--FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTHHHH--CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             HHHHHhCCCCCCCCChhHHHHhhhhcccc--ccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence            99999999999876654444444332221  222322 358999999999999998888  999999999999975

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=6.1e-33  Score=229.42  Aligned_cols=141  Identities=16%  Similarity=0.216  Sum_probs=107.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC--CccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR--KEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~--~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+++.....  .....+++.|+|||++.+  ..++ .++|||||||++|+|+
T Consensus       213 ~~ivHrDikp~NIll~~~~--~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~-~~~DiwSlG~il~ell  287 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDG--RLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFT-HALNAWQLGLSIYRVW  287 (371)
T ss_dssp             TTEEETTCSGGGEEECTTS--CEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECC-HHHHHHHHHHHHHHHH
T ss_pred             CCCccCcCCHHHEEECCCC--CEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcC-ccccHHHHHHHHHHHH
Confidence            4899999999999998776  7999999999854322  114567799999999976  5565 4599999999999999


Q ss_pred             hCCCCCCCCCChhH--HHH-HHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           79 VGAYPFEDPEDPRN--FKT-TIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        79 ~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +|+.||........  +.. ............+....++..+.+||.+||..||.+|||+.++++||||.+
T Consensus       288 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          288 CLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             HSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             hCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            99999976532110  000 000001122333444578999999999999999999999999999999964

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=3.7e-31  Score=217.80  Aligned_cols=149  Identities=21%  Similarity=0.360  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++............+++.|+|||++.+....+.++|||||||++|+|++|
T Consensus       153 ~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g  230 (362)
T 3pg1_A          153 AGVVHRDLHPGNILLADNN--DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR  230 (362)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHS
T ss_pred             CcCEecCCChHHEEEcCCC--CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhC
Confidence            4899999999999998776  79999999998655555555567999999999997744344559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc--------------------ccCC------CCCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH--------------------YSIP------GYVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~--------------------~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      +.||.+.........+........                    ...+      ....+++.+.+||.+||..||.+|||
T Consensus       231 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  310 (362)
T 3pg1_A          231 KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIS  310 (362)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCC
Confidence            999988665444444333221110                    0000      11246888999999999999999999


Q ss_pred             HHHHhcCcccCcCCCcc
Q 027327          135 IPEIQKHPWFLKNLPIE  151 (225)
Q Consensus       135 ~~eil~hp~~~~~~~~~  151 (225)
                      +.++++||||.......
T Consensus       311 ~~ell~hp~f~~~~~~~  327 (362)
T 3pg1_A          311 TEQALRHPYFESLFDPL  327 (362)
T ss_dssp             HHHHHTSGGGTTTCCGG
T ss_pred             HHHHHcCchhhhccCcc
Confidence            99999999998764443

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=2.3e-31  Score=222.47  Aligned_cols=147  Identities=27%  Similarity=0.364  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcC--CCCCCEEEecCCCccCCCCC----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG--SKAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~--~~~~~vkl~Dfg~a~~~~~~----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      .|||||||||+|||+..  ...+.+||+|||+++.....    ......+||+.|+|||++.+....+.++|||||||++
T Consensus       147 ~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il  226 (405)
T 3rgf_A          147 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF  226 (405)
T ss_dssp             TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHH
T ss_pred             CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHH
Confidence            48999999999999932  12237999999999865432    2223457899999999998755445569999999999


Q ss_pred             HHHHhCCCCCCCCCCh---------hHHHHHHHHHhccccc-C-------------------------------CCCCCC
Q 027327           75 YVMLVGAYPFEDPEDP---------RNFKTTIQRILSVHYS-I-------------------------------PGYVRV  113 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~---------~~~~~~~~~~~~~~~~-~-------------------------------~~~~~~  113 (225)
                      |+|++|+.||......         ..+..++..+...... +                               ......
T Consensus       227 ~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (405)
T 3rgf_A          227 AELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP  306 (405)
T ss_dssp             HHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCT
T ss_pred             HHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCC
Confidence            9999999999764431         2222222211110000 0                               001123


Q ss_pred             CHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          114 SLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       114 ~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +..+.+||.+||.+||.+|||+.++|+||||...
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence            6789999999999999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=5.3e-31  Score=213.85  Aligned_cols=141  Identities=33%  Similarity=0.561  Sum_probs=111.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||++....... ......||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       160 ~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~~  236 (321)
T 2c30_A          160 QGVIHRDIKSDSILLTLDG--RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATE-VDIWSLGIMVIEMVD  236 (321)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEECCCC--cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987654332 2344579999999999988777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc-cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV-HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |+.||.........    ..+... .........+++.+++||.+||..||.+|||+.++++||||.+..
T Consensus       237 g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          237 GEPPYFSDSPVQAM----KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             SSCTTTTSCHHHHH----HHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             CCCCCCCCCHHHHH----HHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence            99999865443322    222222 112223345789999999999999999999999999999998653

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=2.2e-31  Score=218.52  Aligned_cols=143  Identities=38%  Similarity=0.640  Sum_probs=103.0

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++. +..+.+||+|||+++............||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       167 ~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~  245 (349)
T 2w4o_A          167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE-VDMWSVGIITYILLC  245 (349)
T ss_dssp             TTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTH-HHHHHHHHHHHHHHH
T ss_pred             CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcc-cchHHHHHHHHHHHh
Confidence            48999999999999975 2233799999999986554444455679999999999988777654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||........   ....+......  .+....++.++++||.+||..||.+|||+.++++||||...
T Consensus       246 g~~pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          246 GFEPFYDERGDQF---MFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             SSCTTCCTTCHHH---HHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred             CCCCCCCCcccHH---HHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            9999976554432   22333333322  23335689999999999999999999999999999999764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=3e-31  Score=215.82  Aligned_cols=138  Identities=35%  Similarity=0.595  Sum_probs=107.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... ......+||+.|+|||++.+..++. ++|||||||++|+|++
T Consensus       140 ~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~el~~  216 (327)
T 3a62_A          140 KGIIYRDLKPENIMLNHQG--HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR-AVDWWSLGALMYDMLT  216 (327)
T ss_dssp             TTCCCCCCCTTTEEECTTS--CEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCT-HHHHHHHHHHHHHHHH
T ss_pred             CCEEcccCCHHHeEECCCC--cEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCC-cccchhHHHHHHHHHH
Confidence            4899999999999998776  7999999998754322 2334557999999999998877754 4999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      |+.||.......    ....+.......+  ..++.++++||.+||..||.+||     ++.++++||||...
T Consensus       217 g~~pf~~~~~~~----~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          217 GAPPFTGENRKK----TIDKILKCKLNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             SSCSCCCSSHHH----HHHHHHHTCCCCC--TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             CCCCCCCCCHHH----HHHHHHhCCCCCC--CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            999998755433    3333444444444  35899999999999999999999     88999999999753

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=1.2e-31  Score=218.26  Aligned_cols=147  Identities=28%  Similarity=0.363  Sum_probs=104.9

Q ss_pred             CceEecCCCCCcEEEcCCC---CCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK---APRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~---~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|||||||||+|||++.++   ...+||+|||+++..... ......++|+.|+|||++.+....+.++|||||||++|+
T Consensus       151 ~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  230 (329)
T 3gbz_A          151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAE  230 (329)
T ss_dssp             TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence            4899999999999995322   225999999998754322 223345689999999999875544455999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhccccc-CC-------------CC----------CCCCHHHHHHHHhhcccCCCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYS-IP-------------GY----------VRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~----------~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      |++|..||........+..+.......... .+             ..          ..++.++++||.+||+.||.+|
T Consensus       231 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  310 (329)
T 3gbz_A          231 MLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKR  310 (329)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhC
Confidence            999999998876655555544432211100 00             00          0167899999999999999999


Q ss_pred             CCHHHHhcCcccCcC
Q 027327          133 ITIPEIQKHPWFLKN  147 (225)
Q Consensus       133 ~s~~eil~hp~~~~~  147 (225)
                      ||+.++++||||...
T Consensus       311 ~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          311 ISAKNALEHPYFSHN  325 (329)
T ss_dssp             CCHHHHHTSGGGSSS
T ss_pred             CCHHHHhCCcccCCC
Confidence            999999999999864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=1.7e-31  Score=218.57  Aligned_cols=140  Identities=30%  Similarity=0.469  Sum_probs=103.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccC-----------CccCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSR-----------KEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~-----------~~~~~~~~D   66 (225)
                      .||+||||||+|||++. +  .+||+|||+++.......   ....+||+.|+|||++.+           ..++ .++|
T Consensus       127 ~~iiHrDikp~NIll~~-~--~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~-~~~D  202 (343)
T 3dbq_A          127 HGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS-PKSD  202 (343)
T ss_dssp             TTCCCCCCCGGGEEEET-T--EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CC-HHHH
T ss_pred             CCeecCCCCcceEEEEC-C--cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCC-chhh
Confidence            48999999999999973 3  699999999986543322   234579999999999864           3443 4599


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||||||++|+|++|+.||.......   .....+.............+..+.+||.+||..||.+|||+.++++||||..
T Consensus       203 iwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          203 VWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence            9999999999999999997654321   2223333333333333446789999999999999999999999999999975


Q ss_pred             C
Q 027327          147 N  147 (225)
Q Consensus       147 ~  147 (225)
                      .
T Consensus       280 ~  280 (343)
T 3dbq_A          280 Q  280 (343)
T ss_dssp             C
T ss_pred             c
Confidence            4

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=5.5e-31  Score=212.35  Aligned_cols=145  Identities=27%  Similarity=0.432  Sum_probs=105.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......+++.|+|||++.+....+.++||||||+++|+|++
T Consensus       121 ~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  198 (311)
T 4agu_A          121 HNCIHRDVKPENILITKHS--VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS  198 (311)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCChhhEEEcCCC--CEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHh
Confidence            4899999999999998776  79999999997654322 23345789999999999764444456999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc---------------cccCCC----------CCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV---------------HYSIPG----------YVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~~----------~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      |..||.+.................               ....+.          ...++..+.+||.+||..||.+|||
T Consensus       199 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  278 (311)
T 4agu_A          199 GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT  278 (311)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCC
Confidence            999998776554443332221110               001111          1357889999999999999999999


Q ss_pred             HHHHhcCcccCcC
Q 027327          135 IPEIQKHPWFLKN  147 (225)
Q Consensus       135 ~~eil~hp~~~~~  147 (225)
                      +.++++||||.+.
T Consensus       279 ~~ell~hp~f~~~  291 (311)
T 4agu_A          279 CEQLLHHPYFENI  291 (311)
T ss_dssp             HHHHHTSGGGTTC
T ss_pred             HHHHhcChHHHhc
Confidence            9999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=3.4e-31  Score=221.70  Aligned_cols=140  Identities=30%  Similarity=0.548  Sum_probs=107.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccC-------CccCCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSR-------KEYDGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~-------~~~~~~~~DiwslG   71 (225)
                      +|||||||||+|||++.++  ++||+|||+++.......  ....+||+.|+|||++..       ..|+ .++||||||
T Consensus       181 ~giiHrDLKp~NILld~~g--~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~-~~~DiwSlG  257 (412)
T 2vd5_A          181 LGYVHRDIKPDNILLDRCG--HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYG-PECDWWALG  257 (412)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEEC-THHHHHHHH
T ss_pred             CCeeecccCHHHeeecCCC--CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCC-hHHhhhHHh
Confidence            5899999999999998777  799999999976544332  234579999999999973       3454 459999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCC-CCCCCHHHHHHHHhhcccCCCCC---CCHHHHhcCcccCc
Q 027327           72 VTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG-YVRVSLECRHLLSRIFVADPEKR---ITIPEIQKHPWFLK  146 (225)
Q Consensus        72 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R---~s~~eil~hp~~~~  146 (225)
                      |++|+|++|+.||........+..+.....  ....|. ...++.++++||++||. +|.+|   ++++++++||||..
T Consensus       258 vilyelltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          258 VFAYEMFYGQTPFYADSTAETYGKIVHYKE--HLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             HHHHHHHHSSCTTCCSSHHHHHHHHHTHHH--HCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHhccc--CcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence            999999999999987665444433332211  122222 23589999999999999 99998   59999999999975

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=2e-31  Score=212.74  Aligned_cols=139  Identities=27%  Similarity=0.480  Sum_probs=98.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccc----cCCccCCCcccHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL----SRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l----~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ||+||||||+||+++.++  .+||+|||+++............||+.|+|||++    .+..++ .++|||||||++|+|
T Consensus       130 ~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~-~~~Di~slG~il~~l  206 (290)
T 3fme_A          130 SVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS-VKSDIWSLGITMIEL  206 (290)
T ss_dssp             CCCCCCCSGGGCEECTTC--CEEBCCC---------------CCCCCCSCHHHHSCCTTC--CC-HHHHHHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEECCCC--CEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCC-cHHHHHHHHHHHHHH
Confidence            899999999999998766  7999999999866555554556799999999996    334444 459999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++|+.||........  .... .............++..+.+||.+||..||.+|||+.++++||||..
T Consensus       207 ~~g~~p~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          207 AILRFPYDSWGTPFQ--QLKQ-VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             HHTSCSSCCCSCHHH--HHHH-HHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHCCCCccccCchHH--HHHH-HhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            999999976444322  1222 22222222223468999999999999999999999999999999974

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=3.1e-31  Score=217.81  Aligned_cols=140  Identities=32%  Similarity=0.641  Sum_probs=109.6

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+|||++.++ ...+||+|||+++....... ....+||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~~ll  227 (351)
T 3c0i_A          149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKP-VDVWGCGVILFILL  227 (351)
T ss_dssp             TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHH
T ss_pred             CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCch-HhhHHHHHHHHHHH
Confidence            4899999999999997543 23599999999976544332 334579999999999988877644 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +|..||.+..  .   .....+....+..+  .+..++.++++||.+||..||.+|||+.++++||||..
T Consensus       228 ~g~~pf~~~~--~---~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          228 SGCLPFYGTK--E---RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HSSCSSCSSH--H---HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HCCCCCCCcH--H---HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            9999997632  1   22333333332222  12357999999999999999999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=3e-30  Score=211.85  Aligned_cols=176  Identities=24%  Similarity=0.290  Sum_probs=118.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++....  ......+|+.|+|||++.+....+.++|||||||++|+|++|
T Consensus       145 ~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g  220 (353)
T 3coi_A          145 AGVVHRDLKPGNLAVNEDC--ELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG  220 (353)
T ss_dssp             TTCCCSSCCGGGEEECTTC--CEEECSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCcccCCCCHHHEeECCCC--cEEEeecccccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhC
Confidence            4899999999999998776  799999999975432  233457899999999987733334459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc------------------------ccc-CCCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV------------------------HYS-IPGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~------------------------~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||.+......+..+.......                        ... ......++..+++||.+||..||.+|||+
T Consensus       221 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~  300 (353)
T 3coi_A          221 KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTA  300 (353)
T ss_dssp             SCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCH
Confidence            99998766544433333211100                        000 01123578999999999999999999999


Q ss_pred             HHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHHHH
Q 027327          136 PEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE  181 (225)
Q Consensus       136 ~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (225)
                      .++++||||.............. .-.........+.+++...+.+
T Consensus       301 ~e~l~hp~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  345 (353)
T 3coi_A          301 AQALTHPFFEPFRDPEEETEAQQ-PFDDSLEHEKLTVDEWKQHIYK  345 (353)
T ss_dssp             HHHHTSGGGTTTCCGGGCCCCSS-CCCCTTTTCCCCHHHHHHHHHH
T ss_pred             HHHhcCcchhhccCccccccCCC-CCccchhhccCCHHHHHHHHHH
Confidence            99999999986543322111111 1111222345566666655443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=1.9e-31  Score=218.42  Aligned_cols=144  Identities=35%  Similarity=0.632  Sum_probs=111.7

Q ss_pred             CceEecCCCCCcEEEcCCCC--CCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA--PRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~--~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||+.....  ..+||+|||+++..... ......+||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       135 ~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~el  213 (342)
T 2qr7_A          135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAA-CDIWSLGVLLYTM  213 (342)
T ss_dssp             TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred             CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCc-cCeeeHhHHHHHH
Confidence            48999999999999854321  25999999999865433 23345678999999999987777654 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++|..||..... .....+...+....+..+  .+..++.++++||++||..||.+|||+.++++||||..
T Consensus       214 l~g~~Pf~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          214 LTGYTPFANGPD-DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             HHSSCSSCSSTT-SCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             hcCCCCCCCCCc-CCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            999999976432 222344444444444333  23468999999999999999999999999999999965

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=1.5e-30  Score=213.26  Aligned_cols=147  Identities=31%  Similarity=0.447  Sum_probs=107.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----------CCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----------PKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----------~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......           .....||+.|+|||++.+....+.++||||
T Consensus       131 ~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s  208 (353)
T 2b9h_A          131 SNVIHRDLKPSNLLINSNC--DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWS  208 (353)
T ss_dssp             TTEECSCCCGGGEEECTTC--CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHH
T ss_pred             CCeecCCCCHHHeEEcCCC--cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHH
Confidence            4899999999999998776  799999999975432211           123468999999998865443345599999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhccc--------------------ccCC------CCCCCCHHHHHHHHh
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVH--------------------YSIP------GYVRVSLECRHLLSR  123 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------~~~~------~~~~~~~~~~~li~~  123 (225)
                      |||++|+|++|+.||.+......+..+........                    ...+      ....++..+.+||.+
T Consensus       209 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  288 (353)
T 2b9h_A          209 CGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR  288 (353)
T ss_dssp             HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHH
Confidence            99999999999999987654433333222111100                    0000      013578899999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCcCCC
Q 027327          124 IFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus       124 ~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ||..||.+|||+.++++||||.....
T Consensus       289 ~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          289 MLVFDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hcCcCcccCCCHHHHhcCccccccCC
Confidence            99999999999999999999986533

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=2.7e-31  Score=226.90  Aligned_cols=142  Identities=37%  Similarity=0.646  Sum_probs=110.9

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++... ...+||+|||+++...........+||+.|+|||++.+ .++. ++|||||||++|+|++
T Consensus       140 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiwslG~il~~ll~  217 (486)
T 3mwu_A          140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDE-KCDVWSAGVILYILLS  217 (486)
T ss_dssp             TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCH-HHHHHHHHHHHHHHHH
T ss_pred             CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCc-hhhHHHHHHHHHHHHh
Confidence            4899999999999996432 23699999999987655555566789999999999975 4554 4999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc--ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH--YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |..||.+......+    ..+....  +..+.+..+++++++||.+||..||.+|||+.++++||||.+..
T Consensus       218 g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          218 GTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             SSCSSCCSSHHHHH----HHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             CCCCCCCCCHHHHH----HHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence            99999876543333    3333332  23344456899999999999999999999999999999998643

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=8.6e-31  Score=212.43  Aligned_cols=144  Identities=27%  Similarity=0.370  Sum_probs=113.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||+++............+++.|+|||++.+..++.+ +|||||||++|+|++|
T Consensus       139 ~gi~H~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g  215 (326)
T 1blx_A          139 HRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP-VDLWSVGCIFAEMFRR  215 (326)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTH-HHHHHHHHHHHHHHHS
T ss_pred             CCceeccCCHHHeEEcCCC--CEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcc-hhHHHHHHHHHHHHcC
Confidence            4899999999999998776  799999999976554444445678999999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc-ccC--------------------CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH-YSI--------------------PGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~-~~~--------------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      +.||.+......+..+........ ..+                    .....++..+++||.+||..||.+|||+.+++
T Consensus       216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  295 (326)
T 1blx_A          216 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL  295 (326)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            999987766554444443321110 000                    01235788999999999999999999999999


Q ss_pred             cCcccCcC
Q 027327          140 KHPWFLKN  147 (225)
Q Consensus       140 ~hp~~~~~  147 (225)
                      +||||...
T Consensus       296 ~hp~~~~~  303 (326)
T 1blx_A          296 SHPYFQDL  303 (326)
T ss_dssp             TSGGGTTC
T ss_pred             cCcccccc
Confidence            99999754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=3.5e-31  Score=218.54  Aligned_cols=139  Identities=36%  Similarity=0.674  Sum_probs=109.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC------ccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK------EYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~------~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+|||++.++  .+||+|||++.............||+.|+|||++.+.      .++ .++|||||||++
T Consensus       219 ~gi~H~Dlkp~NIl~~~~~--~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~-~~~Di~slG~il  295 (365)
T 2y7j_A          219 NNIVHRDLKPENILLDDNM--QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYG-KEVDLWACGVIL  295 (365)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBC-TTHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCC-chhhHHhHHHHH
Confidence            4899999999999998776  7999999999876555555566899999999998532      344 449999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |+|++|..||........    ...+.......  +.+..++..+.+||.+||..||.+|||+.++++||||.+
T Consensus       296 ~ell~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          296 FTLLAGSPPFWHRRQILM----LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHCCCCCCCCCHHHH----HHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            999999999976544322    22232222222  223457889999999999999999999999999999963

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=4.6e-31  Score=219.70  Aligned_cols=140  Identities=29%  Similarity=0.460  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccC-----------CccCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSR-----------KEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~-----------~~~~~~~~D   66 (225)
                      .|||||||||+|||++. +  .+||+|||+++......   .....+||+.|+|||++.+           ..++ .++|
T Consensus       174 ~~ivHrDlkp~NIll~~-~--~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~-~~~D  249 (390)
T 2zmd_A          174 HGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKIS-PKSD  249 (390)
T ss_dssp             TTCCCCCCCGGGEEESS-S--CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CC-HHHH
T ss_pred             CCeeecCCCHHHEEEEC-C--eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCC-Chhh
Confidence            48999999999999963 3  69999999998654332   1234579999999999865           2343 4599


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||||||++|+|++|+.||.......   .....+.......+.....+..+.+||.+||..||.+|||+.++++||||..
T Consensus       250 iwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  326 (390)
T 2zmd_A          250 VWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  326 (390)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence            9999999999999999997654321   2233344433333333346789999999999999999999999999999975


Q ss_pred             C
Q 027327          147 N  147 (225)
Q Consensus       147 ~  147 (225)
                      .
T Consensus       327 ~  327 (390)
T 2zmd_A          327 Q  327 (390)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=2.6e-31  Score=218.51  Aligned_cols=141  Identities=29%  Similarity=0.400  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCC-----------------------CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC
Q 027327            1 MQICHRDLKLENTLLDGS-----------------------KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR   57 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-----------------------~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~   57 (225)
                      .|||||||||+|||++..                       ....+||+|||+++....  ......||+.|+|||++.+
T Consensus       156 ~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~  233 (360)
T 3llt_A          156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILN  233 (360)
T ss_dssp             TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTT
T ss_pred             CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcC
Confidence            489999999999999751                       133799999999975432  2345678999999999998


Q ss_pred             CccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc-----------------------cCCCC----
Q 027327           58 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-----------------------SIPGY----  110 (225)
Q Consensus        58 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~----  110 (225)
                      ..++.+ +|||||||++|+|++|+.||........+..+.. ......                       .++..    
T Consensus       234 ~~~~~~-~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  311 (360)
T 3llt_A          234 LGWDVS-SDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMES-IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSI  311 (360)
T ss_dssp             CCCCTT-HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-HTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCH
T ss_pred             CCCCCc-cchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-hcCCCCHHHHhhhhhccCccccCcccceecCcccccch
Confidence            888755 9999999999999999999987655433332221 111000                       00000    


Q ss_pred             --------------CCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327          111 --------------VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus       111 --------------~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                                    ...++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          312 NSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                          01236778999999999999999999999999995

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=4.5e-31  Score=225.95  Aligned_cols=140  Identities=37%  Similarity=0.652  Sum_probs=112.0

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|||||||||+|||++..+ ...+||+|||++............+||+.|+|||++. ..++. ++|||||||++|+|++
T Consensus       155 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~-~~DiwslG~il~~ll~  232 (494)
T 3lij_A          155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDE-KCDVWSIGVILFILLA  232 (494)
T ss_dssp             TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCT-HHHHHHHHHHHHHHHH
T ss_pred             CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCC-chhHHHHHHHHHHHHh
Confidence            4899999999999997543 2369999999998766555556678999999999986 44654 4999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |..||.+......    ...+....+.  .+.+..++..+++||.+||.++|.+|||+.++++||||++
T Consensus       233 g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          233 GYPPFGGQTDQEI----LRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             SSCSSCCSSHHHH----HHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             CCCCCCCCCHHHH----HHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence            9999987655333    3333333322  2334568999999999999999999999999999999975

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=2.8e-31  Score=216.97  Aligned_cols=144  Identities=33%  Similarity=0.602  Sum_probs=108.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----CCCCcccCCCCCccccccC--CccCCCcccHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----QPKSTVGTPAYIAPEVLSR--KEYDGKIADVWSCGVT   73 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~l~~--~~~~~~~~DiwslG~i   73 (225)
                      +||+||||||+|||++.++...+||+|||+++......     ......||+.|+|||++.+  ..++ .++|||||||+
T Consensus       187 ~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~DiwslG~i  265 (345)
T 3hko_A          187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG-PKCDAWSAGVL  265 (345)
T ss_dssp             TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCC-THHHHHHHHHH
T ss_pred             CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCC-cHHHHHHHHHH
Confidence            48999999999999986665579999999997542211     1234579999999999865  4444 45999999999


Q ss_pred             HHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           74 LYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        74 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|+|++|+.||...............  ......+....+++.+++||.+||..+|.+|||+.++++||||.+.
T Consensus       266 l~el~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          266 LHLLLMGAVPFPGVNDADTISQVLNK--KLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF  337 (345)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHC--CCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHhc--ccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccC
Confidence            99999999999876654433332221  1112223333578999999999999999999999999999999764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=6e-31  Score=218.70  Aligned_cols=144  Identities=22%  Similarity=0.386  Sum_probs=104.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC--------CCCCCCcccCCCCCccccccC--CccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL--------HSQPKSTVGTPAYIAPEVLSR--KEYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~--------~~~~~~~~g~~~y~aPE~l~~--~~~~~~~~Diwsl   70 (225)
                      .|||||||||+|||++.++  .+||+|||.+.....        .......+||+.|+|||++.+  ..++ .++|||||
T Consensus       147 ~~ivHrDlkp~NIll~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~Diwsl  223 (389)
T 3gni_B          147 MGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYD-AKSDIYSV  223 (389)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBC-THHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCC-cHhHHHHH
Confidence            4899999999999998776  799999998753211        122234478999999999987  4555 45999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcc----------------------------------------cccCCCC
Q 027327           71 GVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV----------------------------------------HYSIPGY  110 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~  110 (225)
                      ||++|+|++|+.||.+.................                                        ....+..
T Consensus       224 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (389)
T 3gni_B          224 GITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYH  303 (389)
T ss_dssp             HHHHHHHHHSSCTTTTCCSTTHHHHC------------------------------------------------------
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccc
Confidence            999999999999998765544333222111000                                        0011122


Q ss_pred             CCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          111 VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       111 ~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..+++.+++||.+||++||.+|||+.++++||||.+.
T Consensus       304 ~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~  340 (389)
T 3gni_B          304 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  340 (389)
T ss_dssp             --CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred             cccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence            3578899999999999999999999999999999764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=4.8e-31  Score=213.91  Aligned_cols=142  Identities=32%  Similarity=0.588  Sum_probs=112.7

Q ss_pred             CceEecCCCCCcEEEcCCCC--CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA--PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~--~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++.  ..+||+|||++.............||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       134 ~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~  212 (321)
T 2a2a_A          134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILL  212 (321)
T ss_dssp             TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTH-HHHHHHHHHHHHHH
T ss_pred             CCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCc-cccHHHHHHHHHHH
Confidence            48999999999999976552  1599999999987655555556679999999999987777654 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCC--CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|..||.+......    ...+.......+.  ...++..+++||.+||..||.+|||+.++++||||...
T Consensus       213 ~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          213 SGASPFLGDTKQET----LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             HSCCSSCCSSHHHH----HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             HCCCCCCCCCHHHH----HHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence            99999987554332    2333333222221  23578999999999999999999999999999999754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=5.6e-31  Score=210.14  Aligned_cols=140  Identities=29%  Similarity=0.531  Sum_probs=101.7

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.+ ..+.+||+|||++.............|++.|+|||++.+ .++ .++|||||||++|+|++
T Consensus       143 ~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~-~~~Di~slG~il~~ll~  220 (285)
T 3is5_A          143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVT-FKCDIWSAGVVMYFLLT  220 (285)
T ss_dssp             TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHTT-CCC-HHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhcc-CCC-cccCeehHHHHHHHHHh
Confidence            489999999999999542 223799999999986655544556679999999999853 454 45999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccC-CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSI-PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |+.||.+......    ........... .....+++.+.+||.+||..||.+|||+.++++||||++
T Consensus       221 g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          221 GCLPFTGTSLEEV----QQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             SSCSSCCSSHHHH----HHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             CCCCCCCCCHHHH----HhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            9999987554322    22222111111 122347899999999999999999999999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=2e-30  Score=205.47  Aligned_cols=143  Identities=37%  Similarity=0.654  Sum_probs=111.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||++......   .......|++.|+|||++.+..+.+.++||||||+++|+|
T Consensus       124 ~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l  201 (276)
T 2yex_A          124 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM  201 (276)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHH
T ss_pred             CCeeccCCChHHEEEccCC--CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHH
Confidence            4899999999999998766  7999999998754322   2233456899999999998777655569999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      ++|..||...........   .........+....++..+.+||.+||..||.+|||+.++++||||.+..
T Consensus       202 ~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (276)
T 2yex_A          202 LAGELPWDQPSDSCQEYS---DWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             HHSSCCCSCSCTTSHHHH---HHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HhCCCCCCCCchHHHHHH---HhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence            999999987654322221   22222222333456899999999999999999999999999999998653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=7e-31  Score=208.24  Aligned_cols=142  Identities=40%  Similarity=0.713  Sum_probs=104.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.++  .+||+|||++.............+++.|+|||++.+..+.+.++|+||||+++|+|++|
T Consensus       130 ~~i~H~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g  207 (276)
T 2h6d_A          130 HMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG  207 (276)
T ss_dssp             HCSSCCCCCGGGEEECTTS--CEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCccCCCChhhEEECCCC--CEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhC
Confidence            3799999999999998776  79999999998665544445567899999999998776655569999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      +.||.......    ....+.......+  ..++..+.+||.+||..||.+|||+.++++||||++..+.
T Consensus       208 ~~p~~~~~~~~----~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~~  271 (276)
T 2h6d_A          208 TLPFDDEHVPT----LFKKIRGGVFYIP--EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPS  271 (276)
T ss_dssp             SCSSCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCCG
T ss_pred             CCCCCCCcHHH----HHHHhhcCcccCc--hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCchh
Confidence            99997654322    2333333333333  3478999999999999999999999999999999876543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=8.2e-31  Score=208.36  Aligned_cols=137  Identities=37%  Similarity=0.642  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||++...... ......|++.|+|||++.+..++.+ +||||||+++|+|++|
T Consensus       128 ~~i~H~dlkp~Nili~~~~--~~~l~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g  203 (279)
T 3fdn_A          128 KRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSS-RRTDLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVG  203 (279)
T ss_dssp             TTCEECCCCGGGEEECTTS--CEEECSCCEESCC---------CCCCTTCCHHHHTTCCCCTT-HHHHHHHHHHHHHHHS
T ss_pred             CCEecccCChHhEEEcCCC--CEEEEeccccccCCcc-cccccCCCCCccCHhHhccCCCCcc-chhHhHHHHHHHHHHC
Confidence            4899999999999998776  7999999998644322 2344578999999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.......    ....+.......+  ..++..+++||.+||..+|.+|||+.++++||||...
T Consensus       204 ~~p~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          204 KPPFEANTYQE----TYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             SCTTCCSSHHH----HHHHHHHTCCCCC--TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             CCCCCCCcHHH----HHHHHHhCCCCCC--CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence            99998654432    2233333333333  3478999999999999999999999999999999754

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=1.5e-31  Score=218.31  Aligned_cols=145  Identities=33%  Similarity=0.607  Sum_probs=88.8

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++ ...+||+|||+++.... .......+|+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       147 ~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~  224 (336)
T 3fhr_A          147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-NALQTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLC  224 (336)
T ss_dssp             TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----------------------CHHHHH-HHHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEEEecCCCceEEEeccccceeccc-cccccCCCCcCccChhhhCCCCCCch-hhHHHHHHHHHHHHH
Confidence            4899999999999997543 23699999999975432 22345578999999999987777654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcc--cccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSV--HYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||...............+...  ....+....++..+++||.+||..||.+|||+.++++||||.+.
T Consensus       225 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          225 GFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             SSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             CCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            999997654432211222222222  22233345689999999999999999999999999999999764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=5.6e-31  Score=209.03  Aligned_cols=139  Identities=35%  Similarity=0.660  Sum_probs=110.2

Q ss_pred             CceEecCCCCCcEEE---cCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLL---DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~---~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||++   +.++  .+||+|||++.............+|+.|+|||++.+. ++.+ +||||||+++|+|
T Consensus       125 ~~i~H~dlkp~Nil~~~~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~-~Di~slG~~l~~l  200 (277)
T 3f3z_A          125 LNVAHRDLKPENFLFLTDSPDS--PLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPE-CDEWSAGVMMYVL  200 (277)
T ss_dssp             TTEECCCCSGGGEEESSSSTTC--CEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTT-HHHHHHHHHHHHH
T ss_pred             CCccCCCCCHHHEEEecCCCCC--cEEEEecccceeccCccchhccCCCCCccChHHhccc-CCch-hhehhHHHHHHHH
Confidence            489999999999999   4444  7999999999876555555666899999999998654 5444 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCC--CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++|..||.........    ..+.......+.  ...+++.+.+||.+||..||.+|||+.++++||||.+.
T Consensus       201 ~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          201 LCGYPPFSAPTDSEVM----LKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHSSCSSCCSSHHHHH----HHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHCCCCCCCCCHHHHH----HHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            9999999876543322    223333333222  22578999999999999999999999999999999754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=9.9e-31  Score=214.59  Aligned_cols=139  Identities=28%  Similarity=0.370  Sum_probs=109.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc---CCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS---RKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~---~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.....   ....||+.|+|||++.   ...++ .++|||||||++|+|
T Consensus       173 ~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~-~~~DiwslG~il~el  246 (348)
T 1u5q_A          173 HNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPA---NSFVGTPYWMAPEVILAMDEGQYD-GKVDVWSLGITCIEL  246 (348)
T ss_dssp             TTCBCCCCSGGGEEEETTT--EEEECCCTTCBSSSSB---CCCCSCGGGCCHHHHHTTSSCCBC-THHHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEECCCC--CEEEeeccCceecCCC---CcccCCcceeCHhhhccccCCCCC-cHHHHHHHHHHHHHH
Confidence            4899999999999998776  7999999999765332   3457999999999985   34554 449999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ++|+.||..........    .+............++..+++||.+||..+|.+|||+.++++||||.+..+
T Consensus       247 l~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          247 AERKPPLFNMNAMSALY----HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             HHSSCTTTTSCHHHHHH----HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HhCCCCCCCCChHHHHH----HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence            99999998765433322    222222222233468999999999999999999999999999999976543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=7.6e-31  Score=215.78  Aligned_cols=143  Identities=34%  Similarity=0.561  Sum_probs=110.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++......  .....+||+.|+|||++.+.. ..+.++|||||||++|+|
T Consensus       178 ~~ivH~Dlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~el  255 (355)
T 1vzo_A          178 LGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL  255 (355)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEECCCC--cEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHH
Confidence            4899999999999998776  79999999987543221  223457999999999997532 234559999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      ++|+.||...........+...+.......+  ..++..+++||.+||..||.+||     ++.++++||||.+.
T Consensus       256 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          256 LTGASPFTVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHCCCCCccCCccchHHHHHHHHhccCCCCC--cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            9999999765443334444444444433333  35889999999999999999999     99999999999753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=4.3e-31  Score=221.76  Aligned_cols=142  Identities=38%  Similarity=0.612  Sum_probs=102.1

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++..+ ...+||+|||+++...........+||+.|+|||++.+   ..++ .++|||||||++|+
T Consensus       258 ~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~DiwslG~il~~  336 (419)
T 3i6u_A          258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFI  336 (419)
T ss_dssp             TTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTH-HHHHHHHHHHHHHH
T ss_pred             CCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCC-chhhhHhHHHHHHH
Confidence            4899999999999997543 23599999999987665555556789999999999864   3343 45999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |++|..||........+...+   ........  .+..++..+.+||.+||..||.+|||+.++++||||..
T Consensus       337 lltg~~pf~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          337 CLSGYPPFSEHRTQVSLKDQI---TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             HHHSSCSSCCCSSSCCHHHHH---HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHCCCCCCCCcchHHHHHHH---hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            999999998655433333322   22222211  12357899999999999999999999999999999964

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=5.2e-31  Score=214.30  Aligned_cols=147  Identities=31%  Similarity=0.592  Sum_probs=94.4

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++ ...+||+|||+++...... .....+||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       125 ~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwslG~il~~ll  203 (325)
T 3kn6_A          125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDES-CDLWSLGVILYTML  203 (325)
T ss_dssp             TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHH-HHHHHHHHHHHHHH
T ss_pred             CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCc-cchHHHHHHHHHHH
Confidence            4899999999999997543 2259999999997544332 2345578999999999988877655 99999999999999


Q ss_pred             hCCCCCCCCCCh---hHHHHHHHHHhcccccCCC--CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           79 VGAYPFEDPEDP---RNFKTTIQRILSVHYSIPG--YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        79 ~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      +|+.||......   .........+....+..+.  +..++.++++||.+||..||.+|||+.++++||||....
T Consensus       204 ~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          204 SGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             HSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             hCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence            999999764321   1123344444444433322  135799999999999999999999999999999998653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=9.4e-31  Score=211.45  Aligned_cols=146  Identities=32%  Similarity=0.613  Sum_probs=104.1

Q ss_pred             CceEecCCCCCcEEEcCCCC-CCEEEecCCCccCCCCCC--------CCCCcccCCCCCccccccC-----CccCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSKA-PRLKICDFGYSKSSVLHS--------QPKSTVGTPAYIAPEVLSR-----KEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~-~~vkl~Dfg~a~~~~~~~--------~~~~~~g~~~y~aPE~l~~-----~~~~~~~~D   66 (225)
                      .||+||||||+|||++.++. ..+||+|||++.......        .....+||+.|+|||++.+     ..++.+ +|
T Consensus       130 ~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~D  208 (316)
T 2ac3_A          130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR-CD  208 (316)
T ss_dssp             TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTT-HH
T ss_pred             CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcc-cc
Confidence            48999999999999976542 249999999987543211        1223469999999999864     345544 99


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChh-----------HHHHHHHHHhcccccCCC--CCCCCHHHHHHHHhhcccCCCCCC
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPR-----------NFKTTIQRILSVHYSIPG--YVRVSLECRHLLSRIFVADPEKRI  133 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~-----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~  133 (225)
                      ||||||++|+|++|+.||.......           ........+.......+.  ...++..+++||.+||..||.+||
T Consensus       209 iwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  288 (316)
T 2ac3_A          209 LWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL  288 (316)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             cHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCC
Confidence            9999999999999999997654211           112233334333333332  135789999999999999999999


Q ss_pred             CHHHHhcCcccCcC
Q 027327          134 TIPEIQKHPWFLKN  147 (225)
Q Consensus       134 s~~eil~hp~~~~~  147 (225)
                      |+.++++||||...
T Consensus       289 s~~e~l~hp~~~~~  302 (316)
T 2ac3_A          289 SAAQVLQHPWVQGC  302 (316)
T ss_dssp             CHHHHHHSTTCC--
T ss_pred             CHHHHhcChhhcCC
Confidence            99999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=1.8e-31  Score=227.79  Aligned_cols=141  Identities=35%  Similarity=0.636  Sum_probs=111.6

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.. ..+.+||+|||+++...........+||+.|+|||++.+ .++ .++|||||||++|+|++
T Consensus       145 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~-~~~DiwslG~il~~ll~  222 (484)
T 3nyv_A          145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYD-EKCDVWSTGVILYILLS  222 (484)
T ss_dssp             TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCC-THHHHHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCC-CcceeHHHHHHHHHHHH
Confidence            489999999999999532 223799999999986655444445679999999999975 455 45999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccc--ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVH--YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||.+......    ...+....  +..+.+..+++.+++||++||.++|.+|||+.++++||||...
T Consensus       223 g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          223 GCPPFNGANEYDI----LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             SSCSSCCSSHHHH----HHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             CCCCCCCCCHHHH----HHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence            9999987654333    33333332  2334445689999999999999999999999999999999754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=9.6e-31  Score=224.45  Aligned_cols=143  Identities=35%  Similarity=0.598  Sum_probs=113.6

Q ss_pred             CceEecCCCCCcEEEcCCCC-CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~-~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++. ..+||+|||+++...........+||+.|+|||++.+ .++. ++|||||||++|+|++
T Consensus       165 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiwslG~il~~ll~  242 (504)
T 3q5i_A          165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNE-KCDVWSCGVIMYILLC  242 (504)
T ss_dssp             TTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCT-HHHHHHHHHHHHHHHH
T ss_pred             CCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCc-hHHHHHHHHHHHHHHh
Confidence            48999999999999986543 2599999999987665555566789999999999864 4654 5999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |..||.+.....    ....+....+..  +.+..++.++++||++||.+||.+|||+.++++||||++...
T Consensus       243 g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          243 GYPPFGGQNDQD----IIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             SSCSSCCSSHHH----HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            999998765433    333333333222  223468999999999999999999999999999999986543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=1.9e-30  Score=211.00  Aligned_cols=142  Identities=30%  Similarity=0.426  Sum_probs=106.4

Q ss_pred             CceEecCCCCCcEEEcCCC-----------------CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCC
Q 027327            1 MQICHRDLKLENTLLDGSK-----------------APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK   63 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-----------------~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~   63 (225)
                      .||+||||||+|||++...                 .+.+||+|||+++....  ......||+.|+|||++.+..++.+
T Consensus       137 ~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~  214 (339)
T 1z57_A          137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQP  214 (339)
T ss_dssp             TTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTH
T ss_pred             CCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcc
Confidence            4899999999999997632                 33699999999975432  2345578999999999988777655


Q ss_pred             cccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc--------------------------------------
Q 027327           64 IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY--------------------------------------  105 (225)
Q Consensus        64 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------------------  105 (225)
                       +|||||||++|+|++|..||........... +..+.....                                      
T Consensus       215 -~Di~slG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
T 1z57_A          215 -CDVWSIGCILIEYYLGFTVFPTHDSKEHLAM-MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK  292 (339)
T ss_dssp             -HHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH-HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG
T ss_pred             -hhhHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchh
Confidence             9999999999999999999987654433222 222211000                                      


Q ss_pred             -cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327          106 -SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       106 -~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                       ........+..+.+||.+||..||.+|||+.++++||||..
T Consensus       293 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          293 EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             GGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             hhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence             00001123467889999999999999999999999999974

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.96  E-value=1.5e-30  Score=213.00  Aligned_cols=143  Identities=29%  Similarity=0.420  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCC-----------------CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCC
Q 027327            1 MQICHRDLKLENTLLDGS-----------------KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK   63 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-----------------~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~   63 (225)
                      .||+||||||+|||+...                 ....+||+|||+++....  ......||+.|+|||++.+..++.+
T Consensus       142 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~  219 (355)
T 2eu9_A          142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQP  219 (355)
T ss_dssp             TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCTH
T ss_pred             CCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCCc
Confidence            489999999999999431                 123799999999975432  2345579999999999988877655


Q ss_pred             cccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc--------------------------------------
Q 027327           64 IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY--------------------------------------  105 (225)
Q Consensus        64 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------------------  105 (225)
                       +|||||||++|+|++|..||............ .++.....                                      
T Consensus       220 -~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (355)
T 2eu9_A          220 -CDVWSIGCILFEYYRGFTLFQTHENREHLVMM-EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK  297 (355)
T ss_dssp             -HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG
T ss_pred             -cchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCccc
Confidence             99999999999999999999876554333222 22211100                                      


Q ss_pred             -cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327          106 -SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       106 -~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                       ........+..+.+||.+||..||.+|||+.++++||||...
T Consensus       298 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          298 SYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             GGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             ccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence             000011124578899999999999999999999999999764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=6.8e-31  Score=213.87  Aligned_cols=145  Identities=29%  Similarity=0.451  Sum_probs=106.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++..... .......+++.|+|||++.+....+.++|||||||++|+|++
T Consensus       143 ~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  220 (331)
T 4aaa_A          143 HNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM  220 (331)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH
T ss_pred             CCEEccCcChheEEEcCCC--cEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHh
Confidence            4899999999999998776  7999999999754432 223345789999999999876444556999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhc---------------ccccCCC----------CCCCCHHHHHHHHhhcccCCCCCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILS---------------VHYSIPG----------YVRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~---------------~~~~~~~----------~~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      |+.||..................               .....+.          ...++..+.+||.+||..||.+|||
T Consensus       221 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  300 (331)
T 4aaa_A          221 GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF  300 (331)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCC
Confidence            99999877655444433322110               0001111          1247889999999999999999999


Q ss_pred             HHHHhcCcccCcC
Q 027327          135 IPEIQKHPWFLKN  147 (225)
Q Consensus       135 ~~eil~hp~~~~~  147 (225)
                      +.++++||||...
T Consensus       301 ~~ell~hp~f~~~  313 (331)
T 4aaa_A          301 CAELLHHDFFQMD  313 (331)
T ss_dssp             GGGGGGSHHHHGG
T ss_pred             HHHHhcCchhccC
Confidence            9999999999753

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=3e-31  Score=219.74  Aligned_cols=130  Identities=16%  Similarity=0.240  Sum_probs=101.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC-----------ccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK-----------EYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~-----------~~~~~~~Diws   69 (225)
                      .|||||||||+|||++.++  .+||+|||+++....  ......| +.|+|||++.+.           .++ .++||||
T Consensus       225 ~~ivHrDikp~NIll~~~~--~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~-~~~DvwS  298 (377)
T 3byv_A          225 YGLVHTYLRPVDIVLDQRG--GVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMT-FSFDAWA  298 (377)
T ss_dssp             TTEECSCCCGGGEEECTTC--CEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECC-HHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCC-hhhhHHH
Confidence            4899999999999998776  799999999985322  2234467 999999999876           565 4499999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |||++|+|++|+.||.........          .........+++++.+||.+||..||.+|||+.++++||||..
T Consensus       299 lG~il~elltg~~Pf~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          299 LGLVIYWIWCADLPITKDAALGGS----------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHHHHHHHHSSCCC------CCS----------GGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHHHHHHHHCCCCCcccccccch----------hhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            999999999999999764322111          1111222468999999999999999999999999999999964

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=2.2e-30  Score=205.71  Aligned_cols=138  Identities=30%  Similarity=0.639  Sum_probs=88.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......|++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       131 ~~i~H~dl~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~  207 (278)
T 3cok_A          131 HGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLE-SDVWSLGCMFYTLLI  207 (278)
T ss_dssp             TTEECSSCCGGGEEECTTC--CEEECCCTTCEECC----------------------------C-THHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCC--CEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999987654322 2234568999999999987777655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+.||.........    ..+.......+  ..++.++.+||.+||..||.+|||+.++++||||.+.
T Consensus       208 g~~p~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          208 GRPPFDTDTVKNTL----NKVVLADYEMP--SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             SSCSSCCCSCC---------CCSSCCCCC--TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             CCCCCCChhHHHHH----HHHhhcccCCc--cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            99999765543222    22222222222  3478999999999999999999999999999999764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=1.1e-30  Score=214.97  Aligned_cols=141  Identities=28%  Similarity=0.512  Sum_probs=105.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      ||+||||||+|||++.++  .+||+|||++...... ......||+.|+|||++.+..++.+ +|||||||++|+|++|+
T Consensus       152 ~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g~  227 (360)
T 3eqc_A          152 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQ-SDIWSMGLSLVEMAVGR  227 (360)
T ss_dssp             CCCCSCCSGGGEEECTTC--CEEECCCCCCHHHHHH-C----CCCCTTCCHHHHTTCCCSHH-HHHHHHHHHHHHHHHTS
T ss_pred             CEEcCCccHHHEEECCCC--CEEEEECCCCcccccc-cccCCCCCCCeECHHHHcCCCCCch-hhHHHHHHHHHHHHhCC
Confidence            799999999999998776  7999999998643221 2234578999999999988777655 99999999999999999


Q ss_pred             CCCCCCCChhHH--------------------------------------HHHHHHHhcccccCCCCCCCCHHHHHHHHh
Q 027327           82 YPFEDPEDPRNF--------------------------------------KTTIQRILSVHYSIPGYVRVSLECRHLLSR  123 (225)
Q Consensus        82 ~pf~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  123 (225)
                      .||.........                                      ......+............++.++++||.+
T Consensus       228 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  307 (360)
T 3eqc_A          228 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK  307 (360)
T ss_dssp             CCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHH
Confidence            999765432211                                      111122222222222223478899999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCc
Q 027327          124 IFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       124 ~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||..||.+|||+.++++||||..
T Consensus       308 ~L~~dP~~Rpt~~ell~hp~~~~  330 (360)
T 3eqc_A          308 CLIKNPAERADLKQLMVHAFIKR  330 (360)
T ss_dssp             HHCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HhhcChhhCCCHHHHhhChHhhc
Confidence            99999999999999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=5.7e-30  Score=205.12  Aligned_cols=141  Identities=37%  Similarity=0.645  Sum_probs=111.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc------CCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS------RKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~------~~~~~~~~~DiwslG~il   74 (225)
                      +||+||||||+||+++.++  .+||+|||++.............+++.|+|||++.      ...++ .++||||||+++
T Consensus       143 ~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~-~~~Di~slG~~l  219 (298)
T 1phk_A          143 LNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYG-KEVDMWSTGVIM  219 (298)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBC-THHHHHHHHHHH
T ss_pred             CCcccCCCCcceEEEcCCC--cEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCC-cccccHhHHHHH
Confidence            4899999999999998776  69999999998665555555567999999999985      23343 459999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |+|++|..||........    ...+......  .+....++..+.+||.+||..||.+|||+.++++||||.+..
T Consensus       220 ~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          220 YTLLAGSPPFWHRKQMLM----LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             HHHHHCCCCCcCccHHHH----HHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            999999999977544322    2223222222  233346889999999999999999999999999999998653

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=6.3e-31  Score=218.44  Aligned_cols=141  Identities=28%  Similarity=0.404  Sum_probs=103.1

Q ss_pred             ceEecCCCCCcEEEcCCC-----------------------------------------------CCCEEEecCCCccCC
Q 027327            2 QICHRDLKLENTLLDGSK-----------------------------------------------APRLKICDFGYSKSS   34 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~-----------------------------------------------~~~vkl~Dfg~a~~~   34 (225)
                      |||||||||+|||++.++                                               ...+||+|||+++..
T Consensus       167 givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~  246 (397)
T 1wak_A          167 RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWV  246 (397)
T ss_dssp             CEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEET
T ss_pred             CEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccc
Confidence            899999999999997553                                               126999999999765


Q ss_pred             CCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCCh------hHHHHHHHHHhcc-----
Q 027327           35 VLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDP------RNFKTTIQRILSV-----  103 (225)
Q Consensus        35 ~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~-----  103 (225)
                      ..  .....+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||......      ..+..+.......     
T Consensus       247 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  323 (397)
T 1wak_A          247 HK--HFTEDIQTRQYRSLEVLIGSGYNTP-ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI  323 (397)
T ss_dssp             TB--CSCSCCSCGGGCCHHHHHTSCCCTH-HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHH
T ss_pred             cc--cCccCCCCCcccCChhhcCCCCCcH-HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHh
Confidence            33  2344579999999999988887654 99999999999999999999765432      1111111111000     


Q ss_pred             ---ccc----------------------------CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327          104 ---HYS----------------------------IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus       104 ---~~~----------------------------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                         .+.                            .......+..+++||.+||++||.+|||+.++++||||.
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          324 VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             HHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             hcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence               000                            000111245688999999999999999999999999996

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=5.4e-30  Score=204.69  Aligned_cols=138  Identities=25%  Similarity=0.462  Sum_probs=104.6

Q ss_pred             ceEecCCCCCcEEEc-CCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            2 QICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~-~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|+||||||+|||++ .++  .+||+|||++..... .......|++.|+|||++.+ .++ .++|||||||++|+|++|
T Consensus       151 ~i~H~dikp~Nil~~~~~~--~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~-~~~Di~slG~~l~~l~~g  225 (290)
T 1t4h_A          151 PIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEE-KYD-ESVDVYAFGMCMLEMATS  225 (290)
T ss_dssp             CCCCSCCCGGGEEESSTTS--CEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGT-CCC-THHHHHHHHHHHHHHHHS
T ss_pred             CEEECCCCHHHEEEECCCC--CEEEeeCCCcccccc-cccccccCCcCcCCHHHHhc-cCC-CcchHHHHHHHHHHHHhC
Confidence            399999999999997 444  799999999864332 22234568999999998864 354 459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +.||..........   ..+.............++++.+||.+||..||.+|||+.++++||||+..
T Consensus       226 ~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          226 EYPYSECQNAAQIY---RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             SCTTTTCSSHHHHH---HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             CCCCCCcCcHHHHH---HHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            99998755543332   22222222222223467899999999999999999999999999999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=2.5e-30  Score=213.37  Aligned_cols=147  Identities=26%  Similarity=0.401  Sum_probs=103.4

Q ss_pred             ceEecCCCCCcEEEcCC----CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGS----KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~----~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ||+||||||+|||++..    ....+||+|||+++....  ......||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       152 ~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~el  228 (373)
T 1q8y_A          152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCG-ADIWSTACLIFEL  228 (373)
T ss_dssp             CEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTH-HHHHHHHHHHHHH
T ss_pred             CEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCch-HhHHHHHHHHHHH
Confidence            89999999999999532    222699999999975533  2334578999999999988877654 9999999999999


Q ss_pred             HhCCCCCCCCCCh------hHHHHHHHHHhcccc------------------------------------cCCCCCCCCH
Q 027327           78 LVGAYPFEDPEDP------RNFKTTIQRILSVHY------------------------------------SIPGYVRVSL  115 (225)
Q Consensus        78 l~g~~pf~~~~~~------~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~  115 (225)
                      ++|+.||......      ..+..+...+.....                                    .......++.
T Consensus       229 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (373)
T 1q8y_A          229 ITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAK  308 (373)
T ss_dssp             HHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHH
T ss_pred             HhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHH
Confidence            9999999764321      111222111100000                                    0001112456


Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCcc
Q 027327          116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE  151 (225)
Q Consensus       116 ~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~  151 (225)
                      ++.+||.+||+.||.+|||+.++++||||.+.....
T Consensus       309 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          309 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred             HHHHHHHHHhccCccccCCHHHHhhChhhhcccCcc
Confidence            788999999999999999999999999998765443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=6.7e-30  Score=203.59  Aligned_cols=137  Identities=34%  Similarity=0.638  Sum_probs=110.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+||+++.++  .+||+|||++...... ......|++.|+|||++.+..++.+ +||||||+++|+|++|
T Consensus       133 ~~i~H~dl~p~Nil~~~~~--~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g  208 (284)
T 2vgo_A          133 RKVIHRDIKPENLLMGYKG--ELKIADFGWSVHAPSL-RRRTMCGTLDYLPPEMIEGKTHDEK-VDLWCAGVLCYEFLVG  208 (284)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCCTTCEECSSS-CBCCCCSCGGGCCHHHHTTCCBCTT-HHHHHHHHHHHHHHHS
T ss_pred             CCceecCCCHHHEEEcCCC--CEEEecccccccCccc-ccccccCCCCcCCHHHhccCCCCcc-cchhhHHHHHHHHHHC
Confidence            4899999999999998776  7999999998654332 2234578999999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.......    ....+.......+  ..++..+++||.+||..+|.+|||+.++++||||...
T Consensus       209 ~~pf~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          209 MPPFDSPSHTE----THRRIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             SCTTCCSSHHH----HHHHHHTTCCCCC--TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             CCCCCCCCHhH----HHHHHhccccCCC--CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence            99998755432    2233333333333  3589999999999999999999999999999999753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=1.7e-30  Score=210.90  Aligned_cols=136  Identities=21%  Similarity=0.348  Sum_probs=102.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-------------CCCCcccCCCCCccccccCCccCCCcccH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-------------QPKSTVGTPAYIAPEVLSRKEYDGKIADV   67 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-------------~~~~~~g~~~y~aPE~l~~~~~~~~~~Di   67 (225)
                      .||+||||||+|||++.++  .+||+|||+++......             ......||+.|+|||++.+..++.+ +||
T Consensus       183 ~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di  259 (332)
T 3qd2_B          183 KGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHK-VDI  259 (332)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTH-HHH
T ss_pred             CCeeecCCCcccEEEeCCC--CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcch-hhH
Confidence            4899999999999998776  79999999997654331             2234469999999999988877654 999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           68 WSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        68 wslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |||||++|+|++|..|+.      ............... ......++.+.+||.+||..||.+|||+.++++||||.+
T Consensus       260 ~slG~il~el~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          260 FSLGLILFELLYSFSTQM------ERVRIITDVRNLKFP-LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHHHHHHHHHHSCCCCHH------HHHHHHHHHHTTCCC-HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             HHHHHHHHHHHHcCCChh------HHHHHHHHhhccCCC-cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            999999999999876652      112222222222111 111235678899999999999999999999999999964

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=7.4e-30  Score=208.81  Aligned_cols=141  Identities=33%  Similarity=0.529  Sum_probs=111.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC-ccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK-EYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~-~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++...... ......+++.|+|||++.+. .+...++|||||||++|+|++
T Consensus       171 ~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~  247 (348)
T 2pml_X          171 KNICHRDVKPSNILMDKNG--RVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY  247 (348)
T ss_dssp             SCEECCCCCGGGEEECTTS--CEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCEeecCCChHhEEEcCCC--cEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHh
Confidence            4899999999999998776  7999999999764333 33445789999999999877 555435999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCC-----------------CCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGY-----------------VRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      |..||.......   .....+.......+..                 ..++..+.+||.+||..||.+|||+.++++||
T Consensus       248 g~~pf~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp  324 (348)
T 2pml_X          248 NVVPFSLKISLV---ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE  324 (348)
T ss_dssp             SSCSSCCSSCSH---HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred             CCCCCCCCCcHH---HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence            999998765532   2233333333333321                 45889999999999999999999999999999


Q ss_pred             ccCcC
Q 027327          143 WFLKN  147 (225)
Q Consensus       143 ~~~~~  147 (225)
                      ||...
T Consensus       325 ~f~~~  329 (348)
T 2pml_X          325 WLADT  329 (348)
T ss_dssp             GGTTC
T ss_pred             cccCC
Confidence            99754

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.96  E-value=4.6e-31  Score=221.23  Aligned_cols=130  Identities=16%  Similarity=0.237  Sum_probs=103.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccc----------cCCccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL----------SRKEYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l----------~~~~~~~~~~Diwsl   70 (225)
                      +|||||||||+|||++.++  .+||+|||+++.....  ....+| +.|+|||++          ....++ .++|||||
T Consensus       230 ~~iiHrDiKp~NILl~~~~--~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~-~~~DvwSl  303 (413)
T 3dzo_A          230 YGLVHTYLRPVDIVLDQRG--GVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMT-FAFDTWTL  303 (413)
T ss_dssp             TTEECSCCCGGGEEECTTC--CEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEEC-HHHHHHHH
T ss_pred             CCcccCCcccceEEEecCC--eEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCC-chhhHHHH
Confidence            5899999999999998777  6999999998754333  344567 999999999          444454 34999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           71 GVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||++|+|++|+.||.........          .........++..+.+||.+||..||.+|||+.++++||||..
T Consensus       304 Gvil~elltg~~Pf~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          304 GLAIYWIWCADLPNTDDAALGGS----------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             HHHHHHHHHSSCCCCTTGGGSCS----------GGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHHHHHHCCCCCCCcchhhhH----------HHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence            99999999999999764432211          1112223358899999999999999999999999999999964

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.96  E-value=5.4e-30  Score=206.94  Aligned_cols=139  Identities=29%  Similarity=0.551  Sum_probs=100.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc-----CCccCCCcccHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS-----RKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~-----~~~~~~~~~DiwslG~il~~   76 (225)
                      ||+||||||+|||++.++  .+||+|||++.............+++.|+|||++.     ...++ .++|||||||++|+
T Consensus       145 ~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~~Di~slG~il~~  221 (318)
T 2dyl_A          145 GVIHRDVKPSNILLDERG--QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD-IRADVWSLGISLVE  221 (318)
T ss_dssp             CCCCCCCCGGGEEECTTS--CEEECCCTTC--------------CCTTCCHHHHC--------CC-THHHHHHHHHHHHH
T ss_pred             CEEeCCCCHHHEEECCCC--CEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCc-cccchhhHHHHHHH
Confidence            799999999999998776  79999999997655444444567999999999985     33444 45999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHh-cccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRIL-SVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |++|+.||.........   ...+. ......+....++..+.+||.+||..||.+|||+.++++||||.+
T Consensus       222 l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          222 LATGQFPYKNCKTDFEV---LTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHSSCTTTTCCSHHHH---HHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHhCCCCCCCCCccHHH---HHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            99999999864443222   22222 222233444468999999999999999999999999999999964

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=8.5e-31  Score=212.85  Aligned_cols=139  Identities=32%  Similarity=0.530  Sum_probs=86.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc----CCccCCCcccHHHHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS----RKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~----~~~~~~~~~DiwslG~il~~l   77 (225)
                      ||+||||||+|||++.++  .+||+|||+++............|++.|+|||++.    +..++ .++|||||||++|+|
T Consensus       146 ~ivH~dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~-~~~Di~slG~il~~l  222 (327)
T 3aln_A          146 KIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYD-VRSDVWSLGITLYEL  222 (327)
T ss_dssp             SCCCSCCCGGGEEEETTT--EEEECCCSSSCC------------------------------CC-SHHHHHHHHHHHHHH
T ss_pred             CEeECCCCHHHEEEcCCC--CEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCC-chhhHHHHHHHHHHH
Confidence            899999999999998776  79999999998665444444457999999999983    44454 459999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhccc---ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVH---YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ++|+.||.......   .....+....   ........++..+.+||.+||..||.+|||+.++++||||..
T Consensus       223 ~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          223 ATGRFPYPKWNSVF---DQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             HHSCCCSSCC----------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHCCCCCCCcchHH---HHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence            99999997643211   1111111111   111112357899999999999999999999999999999964

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=204.76  Aligned_cols=146  Identities=27%  Similarity=0.409  Sum_probs=112.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......|++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       144 ~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~  220 (314)
T 3com_A          144 MRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCV-ADIWSLGITAIEMAE  220 (314)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTT-HHHHHHHHHHHHHHH
T ss_pred             CCCcCCCcCHHHEEECCCC--CEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCcc-ccHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999997544332 2234568999999999988877655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCccc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEF  152 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~~~  152 (225)
                      |..||............   .............++..+.+||.+||..||.+|||+.++++||||........
T Consensus       221 g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~~~  290 (314)
T 3com_A          221 GKPPYADIHPMRAIFMI---PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSI  290 (314)
T ss_dssp             SSCTTTTSCHHHHHHHH---HHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCGGG
T ss_pred             CCCCCCCCChHHHHHHH---hcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcchH
Confidence            99999865543322211   11112222223357899999999999999999999999999999987654433

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=1.4e-29  Score=206.50  Aligned_cols=140  Identities=37%  Similarity=0.587  Sum_probs=111.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +||+||||||+|||++.++  .+||+|||++....... ......|++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       160 ~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~  236 (335)
T 2owb_A          160 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLV  236 (335)
T ss_dssp             TTEECSCCCGGGEEECTTC--CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCCEecCCCchhEEEcCCC--CEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCch-hhHHHHHHHHHHHHH
Confidence            4899999999999998776  79999999997654322 2334579999999999987777544 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+.||........    ...+.......+  ..++..+.+||.+||..||.+|||+.++++||||.....
T Consensus       237 g~~pf~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          237 GKPPFETSCLKET----YLRIKKNEYSIP--KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             SSCTTCCSSHHHH----HHHHHHTCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             CcCCCCCCCHHHH----HHHHhcCCCCCC--ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence            9999976544332    223333333333  357899999999999999999999999999999986543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=4.5e-30  Score=206.58  Aligned_cols=139  Identities=35%  Similarity=0.607  Sum_probs=108.9

Q ss_pred             CceEecCCCCCcEEE---cCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLL---DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~---~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||++   +.++  .+||+|||++...... ......|++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       125 ~~i~H~dikp~NIl~~~~~~~~--~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l  200 (304)
T 2jam_A          125 NGIVHRDLKPENLLYLTPEENS--KIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVITYIL  200 (304)
T ss_dssp             TTCCCCSCCGGGCEESSSSTTC--CEEBCSCSTTCCCCCB-TTHHHHSCCCBCCTTTBSSCSCCHH-HHHHHHHHHHHHH
T ss_pred             CCccccCCCHHHEEEecCCCCC--CEEEccCCcceecCCC-ccccccCCCCccChHHhccCCCCch-hhHHHHHHHHHHH
Confidence            489999999999999   4344  7999999998754322 2233468999999999988777644 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ++|..||........    ...+......  .+....++..+.+||.+||..||.+|||+.++++||||...
T Consensus       201 ~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          201 LCGYPPFYEETESKL----FEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHSSCTTTTSCHHHH----HHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHCCCCCCCCCHHHH----HHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            999999987554322    2333333222  23335689999999999999999999999999999999764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=203.62  Aligned_cols=141  Identities=33%  Similarity=0.580  Sum_probs=110.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++......   .......|++.|+|||++.+.. +.+.++||||||+++|+
T Consensus       128 ~~i~H~dlkp~NIl~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  205 (305)
T 2wtk_C          128 QGIVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYN  205 (305)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHH
T ss_pred             CCeeecCCCcccEEEcCCC--cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHH
Confidence            4899999999999998776  7999999998754322   1223446899999999987643 23445999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |++|+.||......    .....+.......+  ..++..+.+||.+||..||.+|||+.++++||||.+..+
T Consensus       206 l~~g~~p~~~~~~~----~~~~~i~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          206 ITTGLYPFEGDNIY----KLFENIGKGSYAIP--GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHSSCSCCCSSHH----HHHHHHHHCCCCCC--SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHhCCCCCCCchHH----HHHHHHhcCCCCCC--CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            99999999875432    23333333333333  358999999999999999999999999999999987544

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=2.8e-30  Score=205.51  Aligned_cols=141  Identities=33%  Similarity=0.608  Sum_probs=106.6

Q ss_pred             CceEecCCCCCcEEEcCCC--CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK--APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~--~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  ...+||+|||++.............+++.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       127 ~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~  205 (283)
T 3bhy_A          127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILL  205 (283)
T ss_dssp             TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTH-HHHHHHHHHHHHHH
T ss_pred             CCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcc-hhhhhHHHHHHHHH
Confidence            4899999999999997654  22699999999986655444455679999999999987777654 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +|..||........    ...+.......+  ....++..+.+||.+||..||.+|||+.++++||||..
T Consensus       206 ~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          206 SGASPFLGETKQET----LTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             HSSCTTCCSSHHHH----HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             HCCCCCCCcchHHH----HHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence            99999987554322    222222222221  12357889999999999999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=1.6e-29  Score=202.29  Aligned_cols=139  Identities=38%  Similarity=0.602  Sum_probs=111.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......|++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       134 ~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~l~~  210 (294)
T 2rku_A          134 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLV  210 (294)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCccccCCChHhEEEcCCC--CEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  79999999997654322 2334568999999999987777544 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      |+.||.......    ....+.......+  ..++..+.+||.+||..||.+|||+.++++||||....
T Consensus       211 g~~p~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          211 GKPPFETSCLKE----TYLRIKKNEYSIP--KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             SSCTTCCSSHHH----HHHHHHTTCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             CCCCCCCCCHHH----HHHHHhhccCCCc--cccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence            999998755432    2233333333333  35889999999999999999999999999999997653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=1e-29  Score=206.09  Aligned_cols=134  Identities=38%  Similarity=0.578  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEc-CCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~-~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++ .++  .+||+|||+++..... ......||+.|+|||++.+..+.+.++|||||||++|+|++
T Consensus       168 ~~ivH~Dlkp~NIll~~~~~--~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~  244 (320)
T 3a99_A          168 CGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC  244 (320)
T ss_dssp             TTEECCCCSGGGEEEETTTT--EEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEeCCCCHHHEEEeCCCC--CEEEeeCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHH
Confidence            4899999999999998 444  7999999998765432 23345689999999999877765566899999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+.||....      .    +......  ....++.++.+||.+||..||.+|||+.++++||||.....
T Consensus       245 g~~pf~~~~------~----~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          245 GDIPFEHDE------E----IIRGQVF--FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             SSCSCCSHH------H----HHHCCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             CCCCCCChh------h----hhccccc--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            999996521      1    1112222  22458999999999999999999999999999999986543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=3.8e-30  Score=208.63  Aligned_cols=142  Identities=37%  Similarity=0.610  Sum_probs=106.7

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc---CCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS---RKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~---~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++ ...+||+|||+++............|++.|+|||++.   ...++ .++|||||||++|+
T Consensus       133 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~Di~slG~il~~  211 (322)
T 2ycf_A          133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFI  211 (322)
T ss_dssp             TTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCT-THHHHHHHHHHHHH
T ss_pred             CCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCC-chhhHHHHHHHHHH
Confidence            4899999999999997654 2259999999997654332223446899999999974   33444 45999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |++|..||........+...+..   ......  ....++..+.+||.+||..||.+|||+.++++||||..
T Consensus       212 l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          212 CLSGYPPFSEHRTQVSLKDQITS---GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             HHHSSCSSCSTTCSSCHHHHHHH---TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHhCCCCCcccchHHHHHHHHHh---CccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            99999999765543333332221   111111  12357899999999999999999999999999999975

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=206.03  Aligned_cols=140  Identities=29%  Similarity=0.424  Sum_probs=101.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCcccccc-----CCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLS-----RKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~-----~~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+|||++.++  .+||+|||++....... ......|++.|+|||++.     +..++.+ +|||||||++
T Consensus       148 ~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~-~Di~slG~il  224 (326)
T 2x7f_A          148 HKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFK-SDLWSLGITA  224 (326)
T ss_dssp             TTCCCCCCSGGGEEECTTC--CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTT-HHHHHHHHHH
T ss_pred             CCccccCCcHHHEEEcCCC--CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCcc-chHHHHHHHH
Confidence            4899999999999998766  79999999987543322 223457899999999986     3445444 9999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+|++|..||..........    .+............++..+.+||.+||..||.+|||+.++++||||...
T Consensus       225 ~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          225 IEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             HHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             HHHHhCCCCCCCCcHHHHHH----HhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            99999999997655433222    2222222222234578999999999999999999999999999999754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=3.1e-30  Score=206.88  Aligned_cols=147  Identities=30%  Similarity=0.389  Sum_probs=102.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC------CCCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+||+++.++  .+||+|||++.......      ......|++.|+|||++.+....+.++|||||||++
T Consensus       140 ~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  217 (303)
T 2vwi_A          140 NGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA  217 (303)
T ss_dssp             TTCCCCCCSGGGEEECTTC--CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHH
T ss_pred             CCCCCCCCChhhEEEcCCC--CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHH
Confidence            4899999999999998776  79999999986543221      123446899999999987533234559999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhccc----ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVH----YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+|++|+.||....................    ........++..+.+||.+||..||.+|||+.++++||||.+...
T Consensus       218 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          218 IELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             HHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             HHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence            999999999987655443322221110000    001112357889999999999999999999999999999986543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=5.9e-30  Score=206.67  Aligned_cols=146  Identities=25%  Similarity=0.371  Sum_probs=106.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++... ..+||+|||+++.....    .......+++.|+|||++.+....+.++|||||||++|+
T Consensus       139 ~~i~H~dlkp~Nil~~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~e  217 (320)
T 2i6l_A          139 ANVLHRDLKPANLFINTED-LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE  217 (320)
T ss_dssp             TTCBCCCCSGGGEEEETTT-TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHH
T ss_pred             CCEecCCCCHHHEEEcCCC-CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHH
Confidence            4899999999999997433 26999999999864322    122344679999999998763333455999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhc------------------ccccCC------CCCCCCHHHHHHHHhhcccCCCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILS------------------VHYSIP------GYVRVSLECRHLLSRIFVADPEKR  132 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~------------------~~~~~~------~~~~~~~~~~~li~~~l~~dP~~R  132 (225)
                      |++|+.||.+.........+......                  .....+      ....++.++++||.+||..||.+|
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  297 (320)
T 2i6l_A          218 MLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR  297 (320)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCcccc
Confidence            99999999876654433333221100                  000000      113578999999999999999999


Q ss_pred             CCHHHHhcCcccCcC
Q 027327          133 ITIPEIQKHPWFLKN  147 (225)
Q Consensus       133 ~s~~eil~hp~~~~~  147 (225)
                      ||+.++++||||...
T Consensus       298 pt~~ell~hp~~~~~  312 (320)
T 2i6l_A          298 LTAEEALSHPYMSIY  312 (320)
T ss_dssp             CCHHHHHTSHHHHTT
T ss_pred             CCHHHHhCCcccccc
Confidence            999999999999753

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=6.2e-30  Score=204.15  Aligned_cols=141  Identities=38%  Similarity=0.674  Sum_probs=110.4

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++ ...+||+|||++.............+++.|+|||++.+. ++ .++||||||+++|+|++
T Consensus       140 ~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~-~~~Di~slG~~l~~l~~  217 (287)
T 2wei_A          140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YD-EKCDVWSAGVILYILLS  217 (287)
T ss_dssp             TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC-CC-THHHHHHHHHHHHHHHH
T ss_pred             CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcCC-CC-CchhhHhHHHHHHHHHh
Confidence            4899999999999997543 236999999999866554444555789999999998754 54 45999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||.......    ....+.....  ..+....++.++.+||.+||..+|.+|||+.++++||||.+.
T Consensus       218 g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          218 GTPPFYGKNEYD----ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             SSCSSCCSSHHH----HHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            999998755432    2223333322  223335689999999999999999999999999999999753

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=213.60  Aligned_cols=141  Identities=27%  Similarity=0.465  Sum_probs=98.3

Q ss_pred             CceEecCCCCCcEEEcC---CCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccC---CccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDG---SKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~---~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~---~~~~~~~~Diwsl   70 (225)
                      .|||||||||+|||++.   .+...+||+|||+++......    ......||+.|+|||++.+   ..+ +.++|||||
T Consensus       137 ~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~-t~~~DiwSl  215 (432)
T 3p23_A          137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP-TYTVDIFSA  215 (432)
T ss_dssp             TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CC-CTHHHHHHH
T ss_pred             CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCC-CcHHHHHHH
Confidence            48999999999999953   333368899999998654332    2234579999999999974   333 345999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCChhHHHHHHHHHhccccc-CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           71 GVTLYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYS-IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        71 G~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||++|+|++ |..||....... .. .  ........ .......+..+++||.+||+.||.+|||+.++++||||..
T Consensus       216 G~il~ellt~g~~pf~~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          216 GCVFYYVISEGSHPFGKSLQRQ-AN-I--LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHHHHHHHTTSCBTTBSTTTHH-HH-H--HTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HHHHHHHHcCCCCCcchhhHHH-HH-H--HhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            999999999 899996543321 11 1  11111111 1111223456899999999999999999999999999964

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=7.4e-30  Score=206.68  Aligned_cols=139  Identities=29%  Similarity=0.466  Sum_probs=105.5

Q ss_pred             CceEecCCCCCcEEE----cCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc--------CCccCCCcccHH
Q 027327            1 MQICHRDLKLENTLL----DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS--------RKEYDGKIADVW   68 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~----~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~--------~~~~~~~~~Diw   68 (225)
                      .||+||||||+|||+    +..+  .+||+|||+++............||+.|+|||++.        +..++.+ +|||
T Consensus       131 ~~ivH~Dlkp~NIll~~~~~~~~--~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~-~Diw  207 (319)
T 4euu_A          131 NGIVHRNIKPGNIMRVIGEDGQS--VYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGAT-VDLW  207 (319)
T ss_dssp             TTEECSCCSGGGEEEEECTTSCE--EEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTT-HHHH
T ss_pred             CCEecCCCCHHHEEEeccCCCCc--eEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcH-HHHH
Confidence            489999999999998    4443  69999999998766555555667999999999985        3455444 9999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc-------------------cCCCCC----CCCHHHHHHHHhhc
Q 027327           69 SCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-------------------SIPGYV----RVSLECRHLLSRIF  125 (225)
Q Consensus        69 slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~----~~~~~~~~li~~~l  125 (225)
                      ||||++|+|++|+.||............+.++.....                   ..+...    .++..+.+||.+||
T Consensus       208 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  287 (319)
T 4euu_A          208 SIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL  287 (319)
T ss_dssp             HHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhc
Confidence            9999999999999999765554444444444433221                   111111    23457889999999


Q ss_pred             ccCCCCCCCHHHHhcCc
Q 027327          126 VADPEKRITIPEIQKHP  142 (225)
Q Consensus       126 ~~dP~~R~s~~eil~hp  142 (225)
                      +.||++|||+.++++||
T Consensus       288 ~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          288 EADQEKCWGFDQFFAET  304 (319)
T ss_dssp             CCCTTTSCCHHHHHHHH
T ss_pred             cCChhhhccHHHhhhcc
Confidence            99999999999999997

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=3.5e-29  Score=200.18  Aligned_cols=141  Identities=32%  Similarity=0.487  Sum_probs=105.2

Q ss_pred             CceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCc--cCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKE--YDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~--~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++. ++  .+||+|||++....... ......|++.|+|||++.+..  ++ .++||||||+++|+
T Consensus       141 ~~i~H~dl~p~Nil~~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~~~Di~slG~il~~  217 (295)
T 2clq_A          141 NQIVHRDIKGDNVLINTYSG--VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG-KAADIWSLGCTIIE  217 (295)
T ss_dssp             TTEECCCCSGGGEEEETTTC--CEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCS-HHHHHHHHHHHHHH
T ss_pred             CCEEccCCChhhEEEECCCC--CEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCC-cHHHHHHHHHHHHH
Confidence            48999999999999986 44  79999999997654322 223456899999999987543  43 45999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |++|+.||............ ........  .....++.++.+||.+||..||.+|||+.++++||||...
T Consensus       218 l~~g~~pf~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          218 MATGKPPFYELGEPQAAMFK-VGMFKVHP--EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             HHHTSCTTGGGSSHHHHHHH-HHHHCCCC--CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             HHHCCCCccCCCchhHHHHh-hccccccc--cccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence            99999999764433221111 11112122  2234589999999999999999999999999999999754

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.96  E-value=4.8e-29  Score=210.22  Aligned_cols=139  Identities=31%  Similarity=0.495  Sum_probs=99.9

Q ss_pred             CceEecCCCCCcEEEcCC-----------CCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccC-------
Q 027327            1 MQICHRDLKLENTLLDGS-----------KAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSR-------   57 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-----------~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~-------   57 (225)
                      .|||||||||+|||++..           ....+||+|||+++.......     .....||+.|+|||++.+       
T Consensus       134 ~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  213 (434)
T 2rio_A          134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTK  213 (434)
T ss_dssp             TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCC
T ss_pred             CCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccc
Confidence            489999999999999653           233699999999986543321     223479999999999965       


Q ss_pred             CccCCCcccHHHHHHHHHHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCC-----CCCCHHHHHHHHhhcccCCCC
Q 027327           58 KEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGY-----VRVSLECRHLLSRIFVADPEK  131 (225)
Q Consensus        58 ~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dP~~  131 (225)
                      ..+ +.++|||||||++|+|++ |..||.......  ..    +.......+..     ..++.++++||.+||..||.+
T Consensus       214 ~~~-~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~----i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  286 (434)
T 2rio_A          214 RRL-TRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SN----IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLK  286 (434)
T ss_dssp             CCC-CTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HH----HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGG
T ss_pred             cCc-chhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HH----HhcCCCCcccccccccccchHHHHHHHHHHhhCChhh
Confidence            334 455999999999999998 999997644322  11    12222222211     124578999999999999999


Q ss_pred             CCCHHHHhcCcccCc
Q 027327          132 RITIPEIQKHPWFLK  146 (225)
Q Consensus       132 R~s~~eil~hp~~~~  146 (225)
                      |||+.++++||||..
T Consensus       287 Rps~~eil~hp~f~~  301 (434)
T 2rio_A          287 RPTAMKVLRHPLFWP  301 (434)
T ss_dssp             SCCHHHHHTSGGGSC
T ss_pred             CCCHHHHHhCCccCC
Confidence            999999999999964

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=3.3e-29  Score=199.24  Aligned_cols=136  Identities=21%  Similarity=0.234  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCCC-----------------CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCC
Q 027327            1 MQICHRDLKLENTLLDGSK-----------------APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK   63 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-----------------~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~   63 (225)
                      .||+||||||+|||++.++                 ...+||+|||++......   ....|++.|+|||++.+....+.
T Consensus       134 ~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  210 (289)
T 1x8b_A          134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQENYTHLP  210 (289)
T ss_dssp             TTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTTCCTTHH
T ss_pred             CCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---cccCCCccccChhHhcCCCCCCc
Confidence            4899999999999997432                 226999999998765432   23458999999999976644445


Q ss_pred             cccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           64 IADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        64 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      ++|||||||++|+|++|.+++...   ...    ..+..... ......++..+.+||.+||..||.+|||+.++++|||
T Consensus       211 ~~Di~slG~il~~l~~~~~~~~~~---~~~----~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  282 (289)
T 1x8b_A          211 KADIFALALTVVCAAGAEPLPRNG---DQW----HEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV  282 (289)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCSSS---HHH----HHHHTTCC-CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred             hhhHHHHHHHHHHHhcCCCCCcch---hHH----HHHHcCCC-CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence            599999999999999998877542   111    12222221 1222358999999999999999999999999999999


Q ss_pred             cCcC
Q 027327          144 FLKN  147 (225)
Q Consensus       144 ~~~~  147 (225)
                      |...
T Consensus       283 ~~~~  286 (289)
T 1x8b_A          283 LLSA  286 (289)
T ss_dssp             C---
T ss_pred             hhhh
Confidence            9764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=3.1e-29  Score=202.40  Aligned_cols=140  Identities=30%  Similarity=0.468  Sum_probs=102.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccC-----------CccCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSR-----------KEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~-----------~~~~~~~~D   66 (225)
                      .||+||||||+|||++. +  .+||+|||+++.......   .....|++.|+|||++.+           ..+ +.++|
T Consensus       146 ~~ivH~dlkp~NIl~~~-~--~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~-~~~~D  221 (313)
T 3cek_A          146 HGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI-SPKSD  221 (313)
T ss_dssp             TTCCCCCCCGGGEEEET-T--EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CC-CHHHH
T ss_pred             CCceecCCCcccEEEEC-C--eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccC-CchHH
Confidence            48999999999999964 3  699999999976543322   234468999999999865           234 34599


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||||||++|+|++|+.||.......   ...................+..+.+||.+||..||.+|||+.++++||||..
T Consensus       222 i~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~  298 (313)
T 3cek_A          222 VWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  298 (313)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred             HHHHHHHHHHHHhCCCchhhHHHHH---HHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence            9999999999999999997654422   2222333333333333346889999999999999999999999999999975


Q ss_pred             C
Q 027327          147 N  147 (225)
Q Consensus       147 ~  147 (225)
                      .
T Consensus       299 ~  299 (313)
T 3cek_A          299 Q  299 (313)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=5.8e-29  Score=199.90  Aligned_cols=139  Identities=29%  Similarity=0.427  Sum_probs=109.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++....... ......|++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       138 ~~i~H~dl~p~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~  214 (303)
T 3a7i_A          138 EKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK-ADIWSLGITAIELAR  214 (303)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCCccCCCChheEEECCCC--CEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCch-hhhHHHHHHHHHHcc
Confidence            4899999999999998776  79999999997654332 2234568999999999988777654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |..||..........    .+.... .......++..+.+||.+||..+|.+|||+.++++||||.+.
T Consensus       215 g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          215 GEPPHSELHPMKVLF----LIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             SSCTTTTSCHHHHHH----HHHHSC-CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             CCCCCCCcCHHHHHH----HhhcCC-CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            999997654432221    121111 112234689999999999999999999999999999999754

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=4.4e-29  Score=199.95  Aligned_cols=139  Identities=27%  Similarity=0.400  Sum_probs=98.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---------------CCCCCcccCCCCCccccccCCccCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---------------SQPKSTVGTPAYIAPEVLSRKEYDGKIA   65 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---------------~~~~~~~g~~~y~aPE~l~~~~~~~~~~   65 (225)
                      .||+||||||+|||++.++  .+||+|||++......               .......|++.|+|||++.+....+.++
T Consensus       135 ~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  212 (303)
T 1zy4_A          135 QGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI  212 (303)
T ss_dssp             TTCCCSCCCGGGEEECTTS--CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred             CCeecccCCHHhEEEcCCC--CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchh
Confidence            4899999999999998776  7999999998754321               1223446899999999997654334559


Q ss_pred             cHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           66 DVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        66 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      |||||||++|+|++   ||...   .........+.......+  .....+..+++||.+||..||.+|||+.++++|||
T Consensus       213 Di~slG~il~~l~~---p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  286 (303)
T 1zy4_A          213 DMYSLGIIFFEMIY---PFSTG---MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW  286 (303)
T ss_dssp             HHHHHHHHHHHHHS---CCSSH---HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSC
T ss_pred             hHHHHHHHHHHHHh---ccCCc---hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCC
Confidence            99999999999997   55432   122233333333332222  22346778999999999999999999999999999


Q ss_pred             cCcC
Q 027327          144 FLKN  147 (225)
Q Consensus       144 ~~~~  147 (225)
                      |...
T Consensus       287 ~~~~  290 (303)
T 1zy4_A          287 LPVK  290 (303)
T ss_dssp             SCCC
T ss_pred             cCCC
Confidence            9764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.95  E-value=1.5e-28  Score=198.46  Aligned_cols=136  Identities=27%  Similarity=0.420  Sum_probs=97.3

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      |+||||||+|||++.++  .+||+|||+++...... ......||+.|+|||++.+..++.+ +|||||||++|+|++|+
T Consensus       160 ivH~Dikp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~elltg~  236 (309)
T 3p86_A          160 IVHRNLKSPNLLVDKKY--TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEK-SDVYSFGVILWELATLQ  236 (309)
T ss_dssp             CCCTTCCGGGEEECTTC--CEEECCCC-----------------CCTTSCHHHHTTCCCCTT-HHHHHHHHHHHHHHHCC
T ss_pred             EECCCCChhhEEEeCCC--cEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCch-hhHHHHHHHHHHHHhCC
Confidence            99999999999998776  79999999997543322 2234579999999999988877655 99999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc--CcccC
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK--HPWFL  145 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~--hp~~~  145 (225)
                      .||.........    ..+............+++.+.+||.+||..+|.+|||+.++++  .+++.
T Consensus       237 ~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          237 QPWGNLNPAQVV----AAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             CTTTTSCHHHHH----HHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             CCCCCCCHHHHH----HHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999876543322    2222222223333468999999999999999999999999987  34443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=2.2e-29  Score=202.03  Aligned_cols=141  Identities=30%  Similarity=0.436  Sum_probs=103.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCcccccc-----CCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLS-----RKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~-----~~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+||+++.++  .+||+|||++...... .......|++.|+|||++.     +..++ .++||||||+++
T Consensus       136 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~~Di~slG~il  212 (302)
T 2j7t_A          136 KRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD-YKADIWSLGITL  212 (302)
T ss_dssp             TTCCCCCCSGGGEEECTTS--CEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTT-THHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCc-hhhhHHHHHHHH
Confidence            4899999999999998766  7999999987532111 1223456899999999984     44454 459999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+|++|..||.............   ............++..+.+||.+||..||.+|||+.++++||||...
T Consensus       213 ~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          213 IEMAQIEPPHHELNPMRVLLKIA---KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHH---HSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             HHHhcCCCCCccCCHHHHHHHHh---ccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence            99999999998755433222211   11111222334578999999999999999999999999999999764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=1.6e-29  Score=204.13  Aligned_cols=141  Identities=22%  Similarity=0.356  Sum_probs=102.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||+++......    ......||+.|+|||++.+..++.+ +|||||||++|+
T Consensus       135 ~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~~l~~  211 (311)
T 3ork_A          135 NGIIHRDVKPANIMISATN--AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYE  211 (311)
T ss_dssp             TTCCCCCCCGGGEEEETTS--CEEECCCSCC------------------CCTTCCHHHHHTCCCCHH-HHHHHHHHHHHH
T ss_pred             CCCCcCCCCHHHEEEcCCC--CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCch-HhHHHHHHHHHH
Confidence            4899999999999998776  79999999997543322    2223468999999999988777655 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |++|+.||.+.............  ...........++.++.+||.+||..||.+||++.++++|+|+..
T Consensus       212 ll~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          212 VLTGEPPFTGDSPVSVAYQHVRE--DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHC--CCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCChHHHHHHHhcC--CCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            99999999875543322222111  011111112358999999999999999999999999999999863

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=5.8e-29  Score=201.60  Aligned_cols=142  Identities=23%  Similarity=0.342  Sum_probs=97.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++........   ....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       156 ~~ivH~Dikp~NIli~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  232 (323)
T 3qup_A          156 RNFIHRDLAARNCMLAEDM--TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVH-SDVWAFGVTMWEI  232 (323)
T ss_dssp             TTCCCSCCSGGGEEECTTS--CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCcccCCCCcceEEEcCCC--CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCc-cchhhHHHHHHHH
Confidence            4899999999999998776  7999999999765433222   22346778999999988777644 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-------HHHHhcCcccCcCCC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-------IPEIQKHPWFLKNLP  149 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-------~~eil~hp~~~~~~~  149 (225)
                      ++ |..||.+..........    .... ..+....++..+.+||.+||..||.+|||       +++++.|||+.....
T Consensus       233 l~~g~~p~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~  307 (323)
T 3qup_A          233 MTRGQTPYAGIENAEIYNYL----IGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ  307 (323)
T ss_dssp             HTTSCCTTTTCCGGGHHHHH----HTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred             HhCCCCCccccChHHHHHHH----hcCC-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence            99 99999876654433322    2211 22333468999999999999999999999       677889999986544


Q ss_pred             c
Q 027327          150 I  150 (225)
Q Consensus       150 ~  150 (225)
                      .
T Consensus       308 ~  308 (323)
T 3qup_A          308 D  308 (323)
T ss_dssp             -
T ss_pred             C
Confidence            3

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.5e-28  Score=198.21  Aligned_cols=131  Identities=35%  Similarity=0.581  Sum_probs=105.2

Q ss_pred             ceEecCCCCCcEEEc-CCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            2 QICHRDLKLENTLLD-GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~-~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      ||+||||||+||+++ .++  .+||+|||++...... ......|++.|+|||++.+..+...++|||||||++|+|++|
T Consensus       159 ~i~H~dlkp~Nil~~~~~~--~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  235 (312)
T 2iwi_A          159 GVVHRDIKDENILIDLRRG--CAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG  235 (312)
T ss_dssp             TEECCCCSGGGEEEETTTT--EEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CeeecCCChhhEEEeCCCC--eEEEEEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHC
Confidence            799999999999998 454  7999999998765432 234456899999999998777665459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +.||....      .    +.......+  ..++..+++||.+||..+|.+|||+.++++||||...
T Consensus       236 ~~pf~~~~------~----~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          236 DIPFERDQ------E----ILEAELHFP--AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             SCSCCSHH------H----HHHTCCCCC--TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred             CCCCCChH------H----HhhhccCCc--ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence            99996421      1    112222222  3589999999999999999999999999999999764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.95  E-value=2.7e-28  Score=195.28  Aligned_cols=139  Identities=17%  Similarity=0.168  Sum_probs=102.2

Q ss_pred             CceEecCCCCCcEEEcCCCC---CCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA---PRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~---~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      .||+||||||+|||++.++.   ..+||+|||+++.......        .....||+.|+|||++.+..++.+ +||||
T Consensus       125 ~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~s  203 (298)
T 1csn_A          125 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRR-DDLEA  203 (298)
T ss_dssp             TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH-HHHHH
T ss_pred             CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChH-HHHHH
Confidence            48999999999999976441   2499999999975443322        234569999999999988777544 99999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhH---HHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRN---FKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |||++|+|++|+.||........   +............ ......++.++.+|+.+||..+|.+|||+.++++.
T Consensus       204 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          204 LGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH-HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            99999999999999987543221   1222111111111 01123578999999999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=2.4e-28  Score=195.21  Aligned_cols=138  Identities=23%  Similarity=0.377  Sum_probs=96.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCcccccc---CCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLS---RKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~---~~~~~~~~~DiwslG~il   74 (225)
                      .||+||||||+|||++.++  .+||+|||++......   .......||+.|+|||++.   +..++ .++||||||+++
T Consensus       139 ~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~Di~slG~il  215 (289)
T 3og7_A          139 KSIIHRDLKSNNIFLHEDN--TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS-FQSDVYAFGIVL  215 (289)
T ss_dssp             TTCCCSCCCGGGEEEETTT--EEEECCCC------------------CCCTTCCHHHHC----CCSC-HHHHHHHHHHHH
T ss_pred             CCcccccCccceEEECCCC--CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCC-cccchHHHHHHH
Confidence            4899999999999998776  7999999998754321   2223446899999999986   34444 349999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |+|++|+.||............................++..+.+||.+||..+|.+|||+.++++.
T Consensus       216 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  282 (289)
T 3og7_A          216 YELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE  282 (289)
T ss_dssp             HHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            9999999999887665544444333211111111223578999999999999999999999999863

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=5.2e-29  Score=199.71  Aligned_cols=139  Identities=26%  Similarity=0.376  Sum_probs=98.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccC-----CCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYD-----GKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~-----~~~~Diwsl   70 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......     .....||+.|+|||++.+....     +.++|||||
T Consensus       132 ~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvwsl  209 (301)
T 3q4u_A          132 PAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF  209 (301)
T ss_dssp             CEEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHH
T ss_pred             CCeecCCCChHhEEEcCCC--CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHH
Confidence            4899999999999998776  799999999864332221     2334799999999999766322     135899999


Q ss_pred             HHHHHHHHhC----------CCCCCCCCChhHHHHHHHHHhcccccCCCC------CCCCHHHHHHHHhhcccCCCCCCC
Q 027327           71 GVTLYVMLVG----------AYPFEDPEDPRNFKTTIQRILSVHYSIPGY------VRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        71 G~il~~ll~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      ||++|+|++|          ..||.......................+..      ...+..+.+||.+||+.||.+|||
T Consensus       210 G~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  289 (301)
T 3q4u_A          210 GLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT  289 (301)
T ss_dssp             HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCC
Confidence            9999999999          888865433222222222222222111111      113467999999999999999999


Q ss_pred             HHHHhcC
Q 027327          135 IPEIQKH  141 (225)
Q Consensus       135 ~~eil~h  141 (225)
                      +.++++.
T Consensus       290 ~~~i~~~  296 (301)
T 3q4u_A          290 ALRIKKT  296 (301)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=2.8e-28  Score=201.59  Aligned_cols=133  Identities=23%  Similarity=0.360  Sum_probs=103.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       222 ~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DvwslG~il~el  298 (370)
T 2psq_A          222 QKCIHRDLAARNVLVTENN--VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEI  298 (370)
T ss_dssp             TTEECSCCCGGGEEECTTC--CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeeccccchhhEEECCCC--CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcH-HHHHHHHHHHHHH
Confidence            4899999999999998776  799999999975433222   223357789999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+........    .+... ...+....++.++.+||.+||..+|.+|||+.+++++
T Consensus       299 lt~g~~p~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          299 FTLGGSPYPGIPVEELFK----LLKEG-HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HTTSCCSSTTCCGGGHHH----HHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCCCCCCCCHHHHHH----HHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            98 999998765433222    22222 2223334688999999999999999999999999875

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.9e-28  Score=199.40  Aligned_cols=139  Identities=24%  Similarity=0.427  Sum_probs=98.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccCCC-----cccHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYDGK-----IADVWSCG   71 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~~~-----~~DiwslG   71 (225)
                      |||||||||+|||++.++  .+||+|||+++.......     .....||+.|+|||++.+..+...     ++||||||
T Consensus       162 ~ivH~Dikp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG  239 (337)
T 3mdy_A          162 AIAHRDLKSKNILVKKNG--TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFG  239 (337)
T ss_dssp             CEECSCCCGGGEEECTTS--CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHH
T ss_pred             CEEecccchHHEEECCCC--CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHH
Confidence            899999999999998776  799999999975433222     124579999999999977665443     38999999


Q ss_pred             HHHHHHHhC----------CCCCCCCCChhHHHHHHHHHhcccccCCCC------CCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           72 VTLYVMLVG----------AYPFEDPEDPRNFKTTIQRILSVHYSIPGY------VRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        72 ~il~~ll~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |++|+|++|          ..||.......................+..      ..++..+.+||.+||..||.+|||+
T Consensus       240 ~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~  319 (337)
T 3mdy_A          240 LILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTA  319 (337)
T ss_dssp             HHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCH
Confidence            999999999          677765432221122222222111111111      1345678999999999999999999


Q ss_pred             HHHhcCc
Q 027327          136 PEIQKHP  142 (225)
Q Consensus       136 ~eil~hp  142 (225)
                      .++++|.
T Consensus       320 ~ell~~L  326 (337)
T 3mdy_A          320 LRVKKTL  326 (337)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.95  E-value=3.6e-28  Score=200.32  Aligned_cols=139  Identities=14%  Similarity=0.170  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~   72 (225)
                      +|||||||||+|||++....+.+||+|||+++.......        .....||+.|+|||++.+..++.+ +|||||||
T Consensus       171 ~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~  249 (364)
T 3op5_A          171 HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRR-GDLEILGY  249 (364)
T ss_dssp             TTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHH-HHHHHHHH
T ss_pred             CCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCch-hhHHHHHH
Confidence            489999999999999833334799999999975432211        123459999999999988877654 99999999


Q ss_pred             HHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc-----cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           73 TLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-----SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        73 il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++|+|++|+.||.+...................     .......++.++.+|+.+||..+|.+||++.++++
T Consensus       250 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          250 CMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            999999999999864332222221111111000     00011357899999999999999999999999876

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.95  E-value=1.5e-28  Score=201.28  Aligned_cols=140  Identities=18%  Similarity=0.204  Sum_probs=102.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~   72 (225)
                      .||+||||||+|||++.++.+.+||+|||+++.......        .....||+.|+|||++.+..++.+ +|||||||
T Consensus       170 ~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~  248 (345)
T 2v62_A          170 NEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRR-SDVEILGY  248 (345)
T ss_dssp             TTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHH-HHHHHHHH
T ss_pred             CCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCch-hhHHHHHH
Confidence            489999999999999876645799999999975432211        133469999999999988777654 99999999


Q ss_pred             HHHHHHhCCCCCCCCCC-hhHHHHHHHHHhcccc----cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           73 TLYVMLVGAYPFEDPED-PRNFKTTIQRILSVHY----SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        73 il~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++|+|++|+.||..... ................    .......++.++.+||.+||..+|.+|||+.++++.
T Consensus       249 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          249 CMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            99999999999964322 2222222222111110    001112588999999999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.95  E-value=5.5e-28  Score=193.29  Aligned_cols=136  Identities=18%  Similarity=0.210  Sum_probs=101.7

Q ss_pred             CceEecCCCCCcEEEc---CCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLD---GSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~---~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      .||+||||||+|||++   .++  .+||+|||+++.......        .....||+.|+|||++.+..++.+ +||||
T Consensus       124 ~~ivH~dlkp~NIl~~~~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~s  200 (296)
T 3uzp_A          124 KNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR-DDLES  200 (296)
T ss_dssp             TTEECSCCCGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHH-HHHHH
T ss_pred             CCeeeCCCCHHHeEEecCCCCC--eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcc-hhhHH
Confidence            4899999999999994   444  699999999975443322        234579999999999988777644 99999


Q ss_pred             HHHHHHHHHhCCCCCCCCCC---hhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           70 CGVTLYVMLVGAYPFEDPED---PRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |||++|+|++|+.||.....   ...+............. .....++.++.+|+.+||+.||.+|||+.++++
T Consensus       201 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          201 LGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE-VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH-HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            99999999999999986432   12233332222221110 011357899999999999999999999999876

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.95  E-value=3e-28  Score=197.86  Aligned_cols=133  Identities=20%  Similarity=0.328  Sum_probs=101.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       134 ~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el  210 (325)
T 3kex_A          134 HGMVHRNLAARNVLLKSPS--QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQ-SDVWSYGVTVWEL  210 (325)
T ss_dssp             TTCCCSCCSSTTEEESSSS--CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCCCCCccchheEEECCCC--eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChh-hHhHHhHHHHHHH
Confidence            4899999999999998766  799999999986543322   223457889999999987777654 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+........    .+... ...+....++..+.+||.+||..||.+|||+.+++++
T Consensus       211 ~~~g~~p~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          211 MTFGAEPYAGLRLAEVPD----LLEKG-ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HTTSCCTTTTSCTTHHHH----HHHTT-CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HhCCCCCccccCHHHHHH----HHHcC-CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99 999998765433222    12221 2223333578899999999999999999999999987

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.95  E-value=6.5e-28  Score=192.74  Aligned_cols=136  Identities=18%  Similarity=0.214  Sum_probs=101.6

Q ss_pred             CceEecCCCCCcEEE---cCCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLL---DGSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~---~~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      .||+||||||+|||+   +.++  .+||+|||+++.......        .....||+.|+|||++.+..++.+ +||||
T Consensus       124 ~~ivH~Dlkp~NIl~~~~~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~s  200 (296)
T 4hgt_A          124 KNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR-DDLES  200 (296)
T ss_dssp             TTEECSCCSGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHH-HHHHH
T ss_pred             CCeecCCCCHHHeeeeccCCCC--eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCch-hHHHH
Confidence            489999999999999   5555  699999999975443322        234578999999999988777544 99999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCh---hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           70 CGVTLYVMLVGAYPFEDPEDP---RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |||++|+|++|+.||......   ..+............. .....++.++.+||.+||..+|.+|||+.++++
T Consensus       201 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          201 LGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE-VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh-hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            999999999999999764432   2222222222211110 111347899999999999999999999999876

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.95  E-value=1.3e-28  Score=195.53  Aligned_cols=137  Identities=31%  Similarity=0.512  Sum_probs=104.7

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      |+||||||+|||++.++  .+||+|||+++....... .....|++.|+|||++.+..++.+ +||||||+++|+|++|+
T Consensus       137 ivH~dl~p~NIl~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g~  213 (279)
T 2w5a_A          137 VLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALM  213 (279)
T ss_dssp             -CCCCCSGGGEEECSSS--CEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHH-HHHHHHHHHHHHHHHSS
T ss_pred             eEEeccchhhEEEcCCC--CEEEecCchheeeccccccccccCCCccccChHHhccCCCCch-hhHHHHHHHHHHHHHCC
Confidence            99999999999998776  799999999875433211 123468999999999988777644 99999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           82 YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        82 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      .||.......    ....+...... +....++.++.+||.+||..+|.+|||+.++++|+|+...
T Consensus       214 ~p~~~~~~~~----~~~~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          214 PPFTAFSQKE----LAGKIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             CSSCCSSHHH----HHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             CCCcccCHHH----HHHHHhhcccc-cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            9998754322    22223222221 2223589999999999999999999999999999999764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=1.6e-27  Score=189.92  Aligned_cols=134  Identities=28%  Similarity=0.399  Sum_probs=100.5

Q ss_pred             eEecCCCCCcEEEcCCCC---CCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc--CCccCCCcccHHHHHHHHHHH
Q 027327            3 ICHRDLKLENTLLDGSKA---PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS--RKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~---~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~--~~~~~~~~~DiwslG~il~~l   77 (225)
                      |+||||||+|||++.++.   ..+||+|||+++....  ......|++.|+|||++.  ...++ .++|||||||++|+|
T Consensus       145 ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~-~~~Di~slG~~l~~l  221 (287)
T 4f0f_A          145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYT-EKADTYSFAMILYTI  221 (287)
T ss_dssp             CBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEEC-HHHHHHHHHHHHHHH
T ss_pred             eecCCCCcceEEEeccCCCCceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcC-chhhHHHHHHHHHHH
Confidence            999999999999976541   1399999999974332  233457899999999984  33343 459999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++|+.||........  ..................+++.+.+||.+||..||.+|||+.++++.
T Consensus       222 ~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  283 (287)
T 4f0f_A          222 LTGEGPFDEYSYGKI--KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE  283 (287)
T ss_dssp             HHSSCTTTTCCCCHH--HHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCCCccccccHH--HHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            999999987654332  11222222333333344689999999999999999999999999863

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=1.8e-28  Score=201.32  Aligned_cols=134  Identities=25%  Similarity=0.426  Sum_probs=104.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|||||||||+|||++.++  .+||+|||+++.......   .....+|+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       212 ~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~el  288 (359)
T 3vhe_A          212 RKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEI  288 (359)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCcccCCCChhhEEEcCCC--cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCch-hhhhhHHHHHHHH
Confidence            4899999999999998766  799999999975433222   223468889999999987777654 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+.............    ....+....+++++.+||.+||..+|.+|||+.++++|
T Consensus       289 lt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          289 FSLGASPYPGVKIDEEFCRRLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             TTTSCCSSTTCCCSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCCCccchhHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            98 99999876654443333322    12223334589999999999999999999999999987

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.5e-28  Score=202.98  Aligned_cols=140  Identities=19%  Similarity=0.321  Sum_probs=107.2

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCC---CCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSV---LHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~---~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +||+||||||+|||++.++ ...+||+|||+++...   .........+|+.|+|||++.+..++.+ +|||||||++|+
T Consensus       200 ~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DvwslG~il~e  278 (367)
T 3l9p_A          200 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWE  278 (367)
T ss_dssp             TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHH
T ss_pred             CCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcH-HHHHHHHHHHHH
Confidence            4899999999999998543 2259999999987432   1222334568999999999988777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |++ |..||.......    ....+.... ..+....++..+.+||.+||+.+|.+|||+.+|+++.++..
T Consensus       279 llt~g~~pf~~~~~~~----~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          279 IFSLGYMPYPSKSNQE----VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             HHTTSCCSSTTCCHHH----HHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHH----HHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            998 999998755432    222232222 22333468999999999999999999999999999987754

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.95  E-value=5.5e-28  Score=191.06  Aligned_cols=133  Identities=29%  Similarity=0.436  Sum_probs=97.4

Q ss_pred             eEecCCCCCcEEEcCC------CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            3 ICHRDLKLENTLLDGS------KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~------~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      |+||||||+|||++..      ..+.+||+|||++....... .....|++.|+|||++.+..++.+ +||||||+++|+
T Consensus       129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~  206 (271)
T 3dtc_A          129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKG-SDVWSYGVLLWE  206 (271)
T ss_dssp             CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------CCGGGSCHHHHHHCCCSHH-HHHHHHHHHHHH
T ss_pred             eeecCCchHHEEEecccccccccCcceEEccCCccccccccc-ccCCCCccceeCHHHhccCCCCch-hhHHHHHHHHHH
Confidence            8999999999999752      12369999999997543322 234578999999999987777544 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++|+.||........    ...........+....++..+.+|+.+||..+|.+|||+.+++++
T Consensus       207 l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          207 LLTGEVPFRGIDGLAV----AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHCCCTTTTSCHHHH----HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHH----HHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            9999999987554322    222333333344445689999999999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.95  E-value=1.5e-28  Score=199.87  Aligned_cols=133  Identities=21%  Similarity=0.397  Sum_probs=102.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++........   ....+|+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       136 ~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~el  212 (327)
T 3poz_A          136 RRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ-SDVWSYGVTVWEL  212 (327)
T ss_dssp             TTCCCSCCCGGGEEEEETT--EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeeCCCCChheEEECCCC--CEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCch-hhhhhhHHHHHHH
Confidence            4899999999999998776  7999999999754333222   22346789999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |+.||........ ...+    ......+....++..+.+|+.+||..+|.+|||+.+++++
T Consensus       213 lt~g~~p~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          213 MTFGSKPYDGIPASEI-SSIL----EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HTTSCCTTTTCCGGGH-HHHH----HTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HhcCCCCccCCCHHHH-HHHH----HcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99 9999987655332 2222    2222333445688999999999999999999999999876

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=5.3e-28  Score=198.42  Aligned_cols=140  Identities=13%  Similarity=0.227  Sum_probs=104.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--------CCCCcccCCCCCccccccCCccCCCcccHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGV   72 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~   72 (225)
                      .||+||||||+|||++.++...+||+|||+++......        ......||+.|+|||++.+..++.+ +|||||||
T Consensus       178 ~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~  256 (352)
T 2jii_A          178 NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRR-SDLQSLGY  256 (352)
T ss_dssp             TTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHH-HHHHHHHH
T ss_pred             CCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCch-hhHHHHHH
Confidence            48999999999999987653369999999997543321        1123479999999999988777654 99999999


Q ss_pred             HHHHHHhCCCCCCCCC-ChhHHHHHHHHHhcccccCC----CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           73 TLYVMLVGAYPFEDPE-DPRNFKTTIQRILSVHYSIP----GYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        73 il~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++|+|++|+.||.... ....................    ....++..+.+||.+||..||.+|||+.++++.
T Consensus       257 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          257 CMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence            9999999999998654 33333333333222221111    112468999999999999999999999998763

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=5.5e-28  Score=196.62  Aligned_cols=137  Identities=22%  Similarity=0.252  Sum_probs=100.5

Q ss_pred             CceEecCCCCCcEEEcCCCC---CCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA---PRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~---~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      .|||||||||+|||++.++.   ..+||+|||+++.......        .....||+.|+|||++.+..++.+ +||||
T Consensus       124 ~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~s  202 (330)
T 2izr_A          124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR-DDLEA  202 (330)
T ss_dssp             TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH-HHHHH
T ss_pred             CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCch-hHHHH
Confidence            48999999999999976552   1299999999985433222        235579999999999988877644 99999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCC---CCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG---YVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |||++|+|++|+.||.+..... .......+.......+.   ...++ ++.+|+.+||..+|.+||++.+|++
T Consensus       203 lG~il~ell~g~~Pf~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          203 LGHMFMYFLRGSLPWQGLKADT-LKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHHSSCTTTTCCCSS-HHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCCCCcccccccc-HHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            9999999999999998754322 22222222221111111   11234 9999999999999999999988765

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=1e-27  Score=198.93  Aligned_cols=134  Identities=22%  Similarity=0.346  Sum_probs=104.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|||||||||+|||++.++  .+||+|||+++......   ......+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       210 ~~ivH~Dlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwslG~il~el  286 (382)
T 3tt0_A          210 KKCIHRDLAARNVLVTEDN--VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEI  286 (382)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCEecCCCCcceEEEcCCC--cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCch-hHHHHHHHHHHHH
Confidence            4899999999999998776  79999999998654332   2223457788999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      ++ |..||.......    ....+... ........++.++.+||.+||..+|.+|||+.+++++.
T Consensus       287 lt~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  347 (382)
T 3tt0_A          287 FTLGGSPYPGVPVEE----LFKLLKEG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL  347 (382)
T ss_dssp             HTTSCCSSTTCCHHH----HHHHHHTT-CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhCCCCCCCCCCHHH----HHHHHHcC-CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            99 999998755422    22222222 22233346899999999999999999999999999863

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=4.8e-28  Score=197.82  Aligned_cols=136  Identities=27%  Similarity=0.420  Sum_probs=106.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||++........   .....+|+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       191 ~~ivH~Dikp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~el  267 (344)
T 1rjb_A          191 KSCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK-SDVWSYGILLWEI  267 (344)
T ss_dssp             TTEEETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCcccCCCChhhEEEcCCC--cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChh-HhHHHHHHHHHHH
Confidence            4899999999999998776  799999999975433322   123357889999999987777654 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      ++ |..||.+............    .....+....++..+.+||.+||..||.+|||+.++++|..
T Consensus       268 ~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          268 FSLGVNPYPGIPVDANFYKLIQ----NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             TTTSCCSSTTCCCSHHHHHHHH----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HcCCCCCcccCCcHHHHHHHHh----cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            98 9999987665444333332    22233334458999999999999999999999999998753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.94  E-value=5e-28  Score=196.81  Aligned_cols=133  Identities=21%  Similarity=0.391  Sum_probs=98.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++........   ....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       136 ~~ivH~Dikp~NIl~~~~~--~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~el  212 (327)
T 3lzb_A          136 RRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ-SDVWSYGVTVWEL  212 (327)
T ss_dssp             TTCCCSCCCGGGEEEEETT--EEEECCTTC----------------CCCGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCCcCCCCCHHHEEEcCCC--CEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChH-HHHHHHHHHHHHH
Confidence            4899999999999998776  7999999999765333222   22346778999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+....... ..+    ......+....++.++.+||.+||..||.+|||+.++++.
T Consensus       213 l~~g~~p~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          213 MTFGSKPYDGIPASEIS-SIL----EKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HTTSCCTTTTCCGGGHH-HHH----HTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHCCCCCCCCCCHHHHH-HHH----HcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99 99999876554322 222    1222333445689999999999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=4e-28  Score=196.93  Aligned_cols=137  Identities=22%  Similarity=0.278  Sum_probs=96.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCcc----CCCcccHHHHHHHH
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEY----DGKIADVWSCGVTL   74 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~----~~~~~DiwslG~il   74 (225)
                      ||+||||||+|||++.++  .+||+|||+++.......   .....||+.|+|||++.+...    .+.++|||||||++
T Consensus       151 ~ivH~Dlkp~Nill~~~~--~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il  228 (322)
T 3soc_A          151 AISHRDIKSKNVLLKNNL--TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL  228 (322)
T ss_dssp             EEECSCCSGGGEEECTTC--CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred             CEEeCCCChHhEEECCCC--eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHH
Confidence            899999999999998776  799999999975433222   233579999999999976321    12347999999999


Q ss_pred             HHHHhCCCCCCCCCChh------------HHHHHHHHHhcccccCCCCC------CCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           75 YVMLVGAYPFEDPEDPR------------NFKTTIQRILSVHYSIPGYV------RVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+|++|+.||.+.....            .............. .+...      ..+.++.+||.+||..||.+|||+.
T Consensus       229 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  307 (322)
T 3soc_A          229 WELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKK-RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAG  307 (322)
T ss_dssp             HHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC-CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccC-CCCccccccccchHHHHHHHHHHHccCChhhCcCHH
Confidence            99999999997643211            11112222221111 11111      1234589999999999999999999


Q ss_pred             HHhcC
Q 027327          137 EIQKH  141 (225)
Q Consensus       137 eil~h  141 (225)
                      ++++.
T Consensus       308 ell~~  312 (322)
T 3soc_A          308 CVGER  312 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=6.7e-28  Score=195.81  Aligned_cols=134  Identities=24%  Similarity=0.351  Sum_probs=103.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      .||+||||||+|||++.++  .+||+|||+++............+++.|+|||++.+..++.+ +|||||||++|+|++ 
T Consensus       161 ~~ivH~dlkp~NIl~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~ellt~  237 (327)
T 1fvr_A          161 KQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN-SDVWSYGVLLWEIVSL  237 (327)
T ss_dssp             TTEECSCCSGGGEEECGGG--CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHH-HHHHHHHHHHHHHHTT
T ss_pred             CCccCCCCccceEEEcCCC--eEEEcccCcCccccccccccCCCCCccccChhhhccccCCch-hcchHHHHHHHHHHcC
Confidence            4899999999999998766  799999999975444434444567889999999987777644 999999999999998 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      |+.||.+.....    ....+.. ....+....++..+.+||.+||..+|.+|||+.+++++.
T Consensus       238 g~~pf~~~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L  295 (327)
T 1fvr_A          238 GGTPYCGMTCAE----LYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL  295 (327)
T ss_dssp             SCCTTTTCCHHH----HHHHGGG-TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCCCcHHH----HHHHhhc-CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            999998755422    2222222 222333446889999999999999999999999998863

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=1.1e-27  Score=190.33  Aligned_cols=134  Identities=25%  Similarity=0.335  Sum_probs=107.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||+|||++.............+++.|+|||++.+..++.+ +||||||+++|+|++|
T Consensus       141 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~~  217 (284)
T 2a19_B          141 KKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKE-VDLYALGLILAELLHV  217 (284)
T ss_dssp             TTEECSCCSGGGEEEEETT--EEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTH-HHHHHHHHHHHHHHSC
T ss_pred             CCeeeccCCHHHEEEcCCC--CEEECcchhheeccccccccccCCcccccChhhhccCCCcch-hhhHHHHHHHHHHHhc
Confidence            4899999999999998776  799999999987655555555679999999999988777654 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||...      ......+....  .  ...++..+++||.+||..||.+|||+.++++|++..+.
T Consensus       218 ~~~~~~~------~~~~~~~~~~~--~--~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          218 CDTAFET------SKFFTDLRDGI--I--SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             CSSHHHH------HHHHHHHHTTC--C--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             CCcchhH------HHHHHHhhccc--c--cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            9887421      12222222221  1  23478999999999999999999999999999887654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.94  E-value=8.7e-28  Score=195.24  Aligned_cols=133  Identities=23%  Similarity=0.391  Sum_probs=101.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||+++........    ....+|+.|+|||++.+..++.+ +|||||||++|+
T Consensus       170 ~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~e  246 (325)
T 3kul_A          170 LGYVHRDLAARNVLVDSNL--VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSA-SDVWSFGVVMWE  246 (325)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHH-HHHHHHHHHHHH
T ss_pred             CCeeCCCCCcceEEECCCC--CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcH-HHHHHHHHHHHH
Confidence            4899999999999998776  7999999999865433221    12245778999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++ |..||.........    ..+.. ....+....++..+.+||.+||..||.+|||+.++++.
T Consensus       247 ll~~g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~  307 (325)
T 3kul_A          247 VLAYGERPYWNMTNRDVI----SSVEE-GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV  307 (325)
T ss_dssp             HHTTSCCTTTTSCHHHHH----HHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCcccCCHHHHH----HHHHc-CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            998 99999876543322    22222 22334445689999999999999999999999998863

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.94  E-value=4.7e-28  Score=192.69  Aligned_cols=133  Identities=22%  Similarity=0.392  Sum_probs=94.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  .+||+|||+++........  ....+++.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       135 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~ell  211 (281)
T 1mp8_A          135 KRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL  211 (281)
T ss_dssp             TTCCCSCCSGGGEEEEETT--EEEECC-------------------CCGGGCCHHHHHHCCCSHH-HHHHHHHHHHHHHH
T ss_pred             CCeecccccHHHEEECCCC--CEEECccccccccCcccccccccCCCcccccChhhcccCCCCCc-cCchHHHHHHHHHH
Confidence            4899999999999998766  7999999999765433221  22346788999999987777654 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||...........    +... ...+....+++.+.+||.+||..||.+|||+.+++++
T Consensus       212 ~~g~~pf~~~~~~~~~~~----i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          212 MHGVKPFQGVKNNDVIGR----IENG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             TTSCCTTTTCCGGGHHHH----HHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcCCCCCCcCCHHHHHHH----HHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            6 9999987665443322    2222 1223345689999999999999999999999999865

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=5e-28  Score=193.97  Aligned_cols=138  Identities=29%  Similarity=0.375  Sum_probs=98.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......  .....||+.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       130 ~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~~l~~ll  206 (294)
T 4eqm_A          130 MRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC-TDIYSIGIVLYEML  206 (294)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTT-HHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEECCCC--CEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCch-HhHHHHHHHHHHHH
Confidence            4899999999999998776  799999999976543322  233469999999999988777655 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +|+.||.+...........   ......  ......++..+.++|.+||..||.+||+..+.+.+.|.
T Consensus       207 ~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          207 VGEPPFNGETAVSIAIKHI---QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             HSSCSSCSSCHHHHHHHHH---SSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred             hCCCCCCCCChHHHHHHHh---hccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence            9999998765433222221   111111  11224588999999999999999999955555555543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.94  E-value=2.4e-27  Score=191.09  Aligned_cols=134  Identities=31%  Similarity=0.486  Sum_probs=97.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++. .+||+|||++......  .....||+.|+|||++.+..++.+ +||||||+++|+|++|
T Consensus       124 ~~ivH~dlkp~NIll~~~~~-~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~il~el~~g  199 (307)
T 2eva_A          124 KALIHRDLKPPNLLLVAGGT-VLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEK-CDVFSWGIILWEVITR  199 (307)
T ss_dssp             SCCCCCCCSGGGEEEETTTT-EEEECCCCC--------------CCTTSSCHHHHTCCCCCTH-HHHHHHHHHHHHHHHT
T ss_pred             CCeecCCCChhHEEEeCCCC-EEEEcccccccccccc--cccCCCCCceEChhhhCCCCCCcH-HHHHHHHHHHHHHHHC
Confidence            37999999999999986652 4799999998754322  234468999999999988777655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +.||........  ........ ....+....++..+.+||.+||..+|.+|||+.+++++
T Consensus       200 ~~p~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          200 RKPFDEIGGPAF--RIMWAVHN-GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             CCTTTTTCSSHH--HHHHHHHT-TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCchhhCccHH--HHHHHHhc-CCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            999976543221  11212222 12223344689999999999999999999999999874

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.94  E-value=1.6e-27  Score=188.14  Aligned_cols=134  Identities=24%  Similarity=0.355  Sum_probs=103.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||++........  .....+++.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       123 ~~i~H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~  199 (268)
T 3sxs_A          123 HQFIHRDLAARNCLVDRDL--CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK-SDVWAFGILMWEVF  199 (268)
T ss_dssp             TTEEESSCSGGGEEECTTC--CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETT-HHHHHHHHHHHHHH
T ss_pred             CCeecCCcCcceEEECCCC--CEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchh-hhhHHHHHHHHHHH
Confidence            4899999999999998776  799999999875433321  122346678999999988777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      + |..||.........    ..+.... .......+++.+.+|+.+||..+|.+|||+.+++++.
T Consensus       200 ~~g~~p~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L  259 (268)
T 3sxs_A          200 SLGKMPYDLYTNSEVV----LKVSQGH-RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSI  259 (268)
T ss_dssp             TTTCCTTTTSCHHHHH----HHHHTTC-CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             cCCCCCccccChHHHH----HHHHcCC-CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            8 99999765543322    2222222 2222335789999999999999999999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=1.7e-27  Score=191.90  Aligned_cols=134  Identities=27%  Similarity=0.416  Sum_probs=105.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||++........   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       164 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  240 (313)
T 1t46_A          164 KNCIHRDLAARNILLTHGR--ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE-SDVWSYGIFLWEL  240 (313)
T ss_dssp             TTCCCSCCSGGGEEEETTT--EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeecCCCccceEEEcCCC--CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChH-HHHHHHHHHHHHH
Confidence            4899999999999998776  799999999976544322   223457788999999987777644 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||...............    .........++..+.+||.+||..||.+|||+.+++++
T Consensus       241 lt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          241 FSLGSSPYPGMPVDSKFYKMIKE----GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HTTTCCSSTTCCSSHHHHHHHHH----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCcccchhHHHHHhcc----CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            98 99999876654444433332    22223334689999999999999999999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=1.4e-27  Score=192.40  Aligned_cols=133  Identities=27%  Similarity=0.431  Sum_probs=103.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       169 ~~ivH~dikp~NIli~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  245 (314)
T 2ivs_A          169 MKLVHRDLAARNILVAEGR--KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEI  245 (314)
T ss_dssp             TTEECCCCSGGGEEEETTT--EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHH-HHHHHHHHHHHHH
T ss_pred             CCCcccccchheEEEcCCC--CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCch-hhHHHHHHHHHHH
Confidence            4899999999999998776  799999999975433221   223357788999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+........ .   +... ...+....++..+.+||.+||..||.+|||+.+++++
T Consensus       246 ~t~g~~p~~~~~~~~~~~-~---~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          246 VTLGGNPYPGIPPERLFN-L---LKTG-HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HTTSCCSSTTCCGGGHHH-H---HHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHH-H---hhcC-CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99 999998765533222 1   2221 2223334689999999999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.94  E-value=2.4e-27  Score=189.80  Aligned_cols=138  Identities=22%  Similarity=0.340  Sum_probs=99.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......    .....+++.|+|||++.+..++.+ +||||||+++|+
T Consensus       133 ~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~  209 (295)
T 3ugc_A          133 KRYIHRDLATRNILVENEN--RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYE  209 (295)
T ss_dssp             TTCCCSCCSGGGEEEEETT--EEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHH-HHHHHHHHHHHH
T ss_pred             CCcccCCCCHhhEEEcCCC--eEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChH-HHHHHHHHHHHH
Confidence            4899999999999998776  799999999976543321    122346778999999988877655 999999999999


Q ss_pred             HHhCCCCCCCCCCh-----------hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLVGAYPFEDPEDP-----------RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~g~~pf~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++|..||......           .................+....++.++.+||.+||..||.+|||+.++++.
T Consensus       210 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~  285 (295)
T 3ugc_A          210 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR  285 (295)
T ss_dssp             HHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999998642110           011111111222233344455689999999999999999999999998863

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.94  E-value=1e-27  Score=193.33  Aligned_cols=133  Identities=27%  Similarity=0.392  Sum_probs=98.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---------------CCcccCCCCCccccccCCccCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---------------KSTVGTPAYIAPEVLSRKEYDGKIA   65 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---------------~~~~g~~~y~aPE~l~~~~~~~~~~   65 (225)
                      .||+||||||+|||++.++  .+||+|||+++........               ....||+.|+|||++.+..++.+ +
T Consensus       127 ~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~  203 (310)
T 3s95_A          127 MNIIHRDLNSHNCLVRENK--NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK-V  203 (310)
T ss_dssp             TTEECSCCSTTSEEECTTS--CEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTH-H
T ss_pred             CCccCCCCCcCeEEECCCC--CEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcH-H
Confidence            4899999999999998776  7999999999754322211               14579999999999988877655 9


Q ss_pred             cHHHHHHHHHHHHhCCCCCCCCCChhH-HHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           66 DVWSCGVTLYVMLVGAYPFEDPEDPRN-FKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        66 DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ||||||+++|+|++|..||........ ...........    .....+++.+.+|+.+||..||.+|||+.++++
T Consensus       204 Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          204 DVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999865332110 00000111111    112357889999999999999999999999986

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=8.5e-28  Score=189.96  Aligned_cols=133  Identities=23%  Similarity=0.438  Sum_probs=102.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||+++......  ......+++.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       125 ~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~ll  201 (269)
T 4hcu_A          125 ACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK-SDVWSFGVLMWEVF  201 (269)
T ss_dssp             TTCCCSCCCGGGEEECGGG--CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHHH
T ss_pred             CCeecCCcchheEEEcCCC--CEEeccccccccccccccccccCcccccccCCHHHhcCCCCCch-hhhHHHHHHHHHHh
Confidence            4899999999999998766  79999999987543221  2223456778999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||........    ...+... ........++..+.+|+.+||..+|.+|||+.++++|
T Consensus       202 ~~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          202 SEGKIPYENRSNSEV----VEDISTG-FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TTSCCTTTTCCHHHH----HHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCCHHHH----HHHHhcC-ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            9 9999987554332    2222222 2223334578999999999999999999999999986

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.94  E-value=3e-27  Score=200.06  Aligned_cols=130  Identities=22%  Similarity=0.371  Sum_probs=101.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      +|||||||||+|||++.++  .+||+|||+++.....  .....+++.|+|||++.+..++.+ +|||||||++|+|++ 
T Consensus       308 ~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~-sDvwslG~~l~el~t~  382 (450)
T 1k9a_A          308 NNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSF  382 (450)
T ss_dssp             TTEECSCCCGGGEEECTTS--CEEECCCTTCEECC--------CCCTTTSCHHHHHSSCCCHH-HHHHHHHHHHHHHHTT
T ss_pred             CCeeCCCCCHhhEEECCCC--CEEEeeCCCccccccc--ccCCCCCcceeCHHHhcCCCCCcH-HHHHHHHHHHHHHHhC
Confidence            4899999999999998776  7999999999754322  223357889999999988887655 999999999999998 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |+.||...........    +.. ....+.+..+++.+.+||.+||..||.+|||+.++++
T Consensus       383 g~~P~~~~~~~~~~~~----i~~-~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          383 GRVPYPRIPLKDVVPR----VEK-GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             TCCSSTTSCTTTHHHH----HHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCHHHHHHH----HHc-CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999987665443322    222 2233444568999999999999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.94  E-value=1.8e-27  Score=189.90  Aligned_cols=134  Identities=24%  Similarity=0.390  Sum_probs=103.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++........    .....+++.|+|||++.+..++.+ +||||||+++|+
T Consensus       140 ~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~  216 (291)
T 1u46_A          140 KRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWE  216 (291)
T ss_dssp             TTEECSCCCGGGEEEEETT--EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCcccCCCchheEEEcCCC--CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCch-hhHHHHHHHHHH
Confidence            4899999999999998776  799999999876543322    123357778999999987777544 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++ |+.||......    .....+.......+....++..+.++|.+||..+|.+|||+.+++++
T Consensus       217 l~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          217 MFTYGQEPWIGLNGS----QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHTTSCCTTTTCCHH----HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCcccCCHH----HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            999 99999876543    23333444444444555789999999999999999999999999874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.4e-27  Score=189.14  Aligned_cols=135  Identities=25%  Similarity=0.362  Sum_probs=104.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+||+++.++  .+||+|||++........    .....+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       129 ~~i~H~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~e  205 (287)
T 1u59_A          129 KNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR-SDVWSYGVTMWE  205 (287)
T ss_dssp             TTEECCCCSGGGEEEEETT--EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHH-HHHHHHHHHHHH
T ss_pred             CCEeeCCCchheEEEcCCC--CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCch-hhHHHHHHHHHH
Confidence            4899999999999998776  799999999975533221    223346889999999987777654 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      |++ |+.||.........    ..+.... ..+....+++.+.+||.+||..+|.+||++.+++++.+
T Consensus       206 llt~g~~p~~~~~~~~~~----~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          206 ALSYGQKPYKKMKGPEVM----AFIEQGK-RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHTTSCCTTTTCCTHHHH----HHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHcCCCCCcccCCHHHHH----HHHhcCC-cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            998 99999876553322    2222221 22233468999999999999999999999999998753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=1.4e-27  Score=194.00  Aligned_cols=131  Identities=32%  Similarity=0.529  Sum_probs=84.7

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-------------CCcccCCCCCccccc---cCCccCCCccc
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-------------KSTVGTPAYIAPEVL---SRKEYDGKIAD   66 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-------------~~~~g~~~y~aPE~l---~~~~~~~~~~D   66 (225)
                      |+||||||+|||++.++  .+||+|||+++........             ....+|+.|+|||++   .+..++ .++|
T Consensus       159 ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~-~~~D  235 (337)
T 3ll6_A          159 IIHRDLKVENLLLSNQG--TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG-EKQD  235 (337)
T ss_dssp             CBCCCCCGGGCEECTTS--CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSS-HHHH
T ss_pred             EEEccCCcccEEECCCC--CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCC-hHHh
Confidence            99999999999998776  7999999999765432221             134589999999998   344444 4599


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      ||||||++|+|++|+.||.......        +.......+.....+..+.+||.+||+.||.+|||+.++++|.+-
T Consensus       236 v~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  305 (337)
T 3ll6_A          236 IWALGCILYLLCFRQHPFEDGAKLR--------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE  305 (337)
T ss_dssp             HHHHHHHHHHHHHSSCCC--------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCcchhHHH--------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            9999999999999999997543211        122223334445577889999999999999999999999988543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.94  E-value=2e-27  Score=188.98  Aligned_cols=133  Identities=22%  Similarity=0.338  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  .+||+|||++........  .....+++.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       132 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~ll  208 (281)
T 3cc6_A          132 INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA-SDVWMFAVCMWEIL  208 (281)
T ss_dssp             TTCCCCCCSGGGEEEEETT--EEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHHH
T ss_pred             CCcccCCCccceEEECCCC--cEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCch-hccHHHHHHHHHHH
Confidence            4899999999999998776  799999999876543322  223356788999999987777644 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |+.||........... ..   . ....+....+++.+.+||.+||..+|.+|||+.+++++
T Consensus       209 t~g~~p~~~~~~~~~~~~-~~---~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          209 SFGKQPFFWLENKDVIGV-LE---K-GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             TTTCCTTTTSCGGGHHHH-HH---H-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hCCCCCcccCChHHHHHH-Hh---c-CCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            8 9999976555433222 11   1 11223334588999999999999999999999999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.94  E-value=2e-27  Score=201.41  Aligned_cols=132  Identities=27%  Similarity=0.421  Sum_probs=103.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+++......  ......+++.|+|||++....++.+ +|||||||++|+|+
T Consensus       303 ~~ivHrDlkp~Nill~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~el~  379 (454)
T 1qcf_A          303 RNYIHRDLRAANILVSASL--VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK-SDVWSFGILLMEIV  379 (454)
T ss_dssp             TTCCCSSCSGGGEEECTTC--CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHHH
T ss_pred             CCccCCCCCHHHEEECCCC--cEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcH-HHHHhHHHHHHHHH
Confidence            4899999999999998776  79999999997643221  1123346778999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||.+.........    +.. ....+....++.++.+||.+||..||.+|||+.+|++
T Consensus       380 t~g~~P~~~~~~~~~~~~----i~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          380 TYGRIPYPGMSNPEVIRA----LER-GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             TTSCCSSTTCCHHHHHHH----HHH-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCCCCHHHHHHH----HHc-CCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            9 9999987654333222    222 2334444568999999999999999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=194.27  Aligned_cols=143  Identities=24%  Similarity=0.315  Sum_probs=95.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---------CCCCcccCCCCCccccccCC-------ccCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---------QPKSTVGTPAYIAPEVLSRK-------EYDGKIA   65 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---------~~~~~~g~~~y~aPE~l~~~-------~~~~~~~   65 (225)
                      |||||||||+|||++.++  .+||+|||+++......         ......||+.|+|||++.+.       .++ .++
T Consensus       140 ~ivH~Dikp~Nill~~~~--~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~~~  216 (336)
T 3g2f_A          140 AISHRDLNSRNVLVKNDG--TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESAL-KQV  216 (336)
T ss_dssp             CEECSSCSGGGEEECTTS--CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHH-HHH
T ss_pred             ceeecccccceEEEcCCC--cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccc-ccc
Confidence            899999999999998776  79999999997543221         12244699999999999762       332 348


Q ss_pred             cHHHHHHHHHHHHhCCCCCCCCCChhH-------------HHHHHHHHhcccccCCCC-------CCCCHHHHHHHHhhc
Q 027327           66 DVWSCGVTLYVMLVGAYPFEDPEDPRN-------------FKTTIQRILSVHYSIPGY-------VRVSLECRHLLSRIF  125 (225)
Q Consensus        66 DiwslG~il~~ll~g~~pf~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~~l  125 (225)
                      |||||||++|+|++|..||........             ...............+..       ..++..+.+||.+||
T Consensus       217 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  296 (336)
T 3g2f_A          217 DMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCW  296 (336)
T ss_dssp             HHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHh
Confidence            999999999999999776643221100             001111111111111111       113347999999999


Q ss_pred             ccCCCCCCCHHHHhc------CcccCcC
Q 027327          126 VADPEKRITIPEIQK------HPWFLKN  147 (225)
Q Consensus       126 ~~dP~~R~s~~eil~------hp~~~~~  147 (225)
                      ..||.+|||+.++++      ++|-++.
T Consensus       297 ~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          297 DQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             cCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence            999999999999954      5665543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.94  E-value=1.4e-27  Score=192.58  Aligned_cols=135  Identities=25%  Similarity=0.410  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       167 ~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~~l  243 (316)
T 2xir_A          167 RKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEI  243 (316)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCcccccCccceEEECCCC--CEEECCCccccccccCccceeccCCCcceeecCchhhccccccch-hHHHHHHHHHHHH
Confidence            4899999999999998766  799999999975533322   123457889999999987777654 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      ++ |..||................    ...+....+++.+.++|.+||..+|.+|||+.++++|.
T Consensus       244 ~t~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L  305 (316)
T 2xir_A          244 FSLGASPYPGVKIDEEFCRRLKEG----TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL  305 (316)
T ss_dssp             HTTSCCSSTTCCCSHHHHHHHHHT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhCCCCCCcccchhHHHHHHhccC----ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            98 999998766544333332221    12222345789999999999999999999999999873

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=4.7e-28  Score=196.26  Aligned_cols=140  Identities=23%  Similarity=0.215  Sum_probs=100.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++......   ......||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       158 ~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~il~el  234 (321)
T 2qkw_B          158 RAIIHRDVKSINILLDENF--VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEK-SDVYSFGVVLFEV  234 (321)
T ss_dssp             TTEECSCCCSTTEEECTTC--CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTH-HHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEECCCC--CEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcc-cchHhHHHHHHHH
Confidence            4899999999999998776  79999999997543222   1223458999999999987777654 9999999999999


Q ss_pred             HhCCCCCCCCCChhH--HHHHH-HHHhcccc--------cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           78 LVGAYPFEDPEDPRN--FKTTI-QRILSVHY--------SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        78 l~g~~pf~~~~~~~~--~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      ++|+.||........  ..... ........        ........+..+.+++.+||..||.+|||+.+++++..
T Consensus       235 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  311 (321)
T 2qkw_B          235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE  311 (321)
T ss_dssp             HHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            999999976443221  11111 11111100        00011123457889999999999999999999998753

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.94  E-value=2.3e-27  Score=196.47  Aligned_cols=132  Identities=24%  Similarity=0.361  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       232 ~~ivHrDlkp~Nil~~~~~--~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~il~el  308 (377)
T 3cbl_A          232 KCCIHRDLAARNCLVTEKN--VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE-SDVWSFGILLWET  308 (377)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHH-HHHHHHHHHHHHH
T ss_pred             CCcCCcccCHHHEEEcCCC--cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998776  799999999875432211   112235678999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |..||........    ...+ ......+.+..++..+.+||.+||..||.+|||+.++++
T Consensus       309 ~t~g~~p~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          309 FSLGASPYPNLSNQQT----REFV-EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HTTSCCSSTTSCHHHH----HHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCCCCCHHHH----HHHH-HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            98 9999987554322    1122 222233444568899999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.94  E-value=4.8e-27  Score=200.15  Aligned_cols=136  Identities=18%  Similarity=0.236  Sum_probs=101.0

Q ss_pred             CceEecCCCCCcEEEc---CCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLD---GSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~---~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      +|||||||||+|||++   ..+  .+||+|||+++.......        .....||+.|+|||++.+..++.+ +||||
T Consensus       122 ~gIvHrDIKP~NILl~~~~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~-sDvwS  198 (483)
T 3sv0_A          122 KSFLHRDIKPDNFLMGLGRRAN--QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRR-DDLES  198 (483)
T ss_dssp             TTEECCCCCGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH-HHHHH
T ss_pred             CCEeecccCcceEEEecCCCCC--eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChH-HHHHH
Confidence            5899999999999993   444  799999999976443322        224579999999999988887655 99999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhH---HHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRN---FKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |||++|+|++|+.||.+......   +..+.......... .....++.++.+||.+||..+|.+||++.+|++
T Consensus       199 lGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          199 LGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE-ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999999999987554221   22222221111100 111357899999999999999999999988754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.94  E-value=2.9e-27  Score=190.82  Aligned_cols=133  Identities=24%  Similarity=0.362  Sum_probs=98.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++......   ......+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       166 ~~ivH~dikp~NIli~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  242 (313)
T 3brb_A          166 RNFLHRDLAARNCMLRDDM--TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSK-SDVWAFGVTMWEI  242 (313)
T ss_dssp             TTCCCCCCSGGGEEECTTS--CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHH-HHHHHHHHHHHHH
T ss_pred             CCcccCCCCcceEEEcCCC--cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccch-hhhHHHHHHHHHH
Confidence            4899999999999998776  79999999987543322   1223357888999999988777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||...........    +... ...+....++..+.+||.+||..+|.+|||+.+++++
T Consensus       243 ~~~g~~p~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          243 ATRGMTPYPGVQNHEMYDY----LLHG-HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HTTSCCSSTTCCGGGHHHH----HHTT-CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCCccCCHHHHHHH----HHcC-CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99 8899987655433322    2222 1223334688999999999999999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=1.5e-27  Score=194.01  Aligned_cols=134  Identities=22%  Similarity=0.364  Sum_probs=104.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       183 ~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  259 (333)
T 2i1m_A          183 KNCIHRDVAARNVLLTNGH--VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEI  259 (333)
T ss_dssp             TTEECSCCSGGGCEEEGGG--EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCcccCCcccceEEECCCC--eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChH-HHHHHHHHHHHHH
Confidence            4899999999999998776  799999999975433222   223457788999999987777644 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+.............    ....+.....+..+.+||.+||..+|.+|||+.+++++
T Consensus       260 ~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          260 FSLGLNPYPGILVNSKFYKLVKD----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             TTTSCCSSTTCCSSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCCCCcccchhHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            98 99999876654444333322    22233334578999999999999999999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=3.3e-27  Score=191.11  Aligned_cols=133  Identities=20%  Similarity=0.309  Sum_probs=102.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +||+||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       157 ~~i~H~dikp~NIli~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  233 (322)
T 1p4o_A          157 NKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY-SDVWSFGVVLWEI  233 (322)
T ss_dssp             TTCBCSCCSGGGEEECTTC--CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCCccCCCccceEEEcCCC--eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCch-hhHHHHHHHHHHH
Confidence            4899999999999998776  799999999875433221   123357889999999987777654 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.......    ....+..... .+....++..+.+||.+||..+|.+|||+.++++|
T Consensus       234 ~~~g~~p~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          234 ATLAEQPYQGLSNEQ----VLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHTSCCTTTTSCHHH----HHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCccccCCHHH----HHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            99 899997754432    2222222222 22334689999999999999999999999999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=3.5e-27  Score=192.38  Aligned_cols=139  Identities=23%  Similarity=0.292  Sum_probs=99.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----CCCCcccCCCCCccccccCCccC-----CCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----QPKSTVGTPAYIAPEVLSRKEYD-----GKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~l~~~~~~-----~~~~Diwsl   70 (225)
                      .||+||||||+|||++.++  .+||+|||++.......     ......||+.|+|||++.+....     +.++|||||
T Consensus       166 ~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl  243 (342)
T 1b6c_B          166 PAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  243 (342)
T ss_dssp             CEEECSCCSGGGEEECTTS--CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEECCCC--CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHH
Confidence            4799999999999998776  79999999997543332     22445799999999999765322     135899999


Q ss_pred             HHHHHHHHhC----------CCCCCCCCChh-HHHHHHHHHhcccccCCCC-----CCCCHHHHHHHHhhcccCCCCCCC
Q 027327           71 GVTLYVMLVG----------AYPFEDPEDPR-NFKTTIQRILSVHYSIPGY-----VRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        71 G~il~~ll~g----------~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      ||++|+|++|          ..||....... ........+..........     ...+..+.+||.+||..||.+|||
T Consensus       244 G~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps  323 (342)
T 1b6c_B          244 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT  323 (342)
T ss_dssp             HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCC
Confidence            9999999999          78886643221 1222222222222111111     123357889999999999999999


Q ss_pred             HHHHhcC
Q 027327          135 IPEIQKH  141 (225)
Q Consensus       135 ~~eil~h  141 (225)
                      +.++++|
T Consensus       324 ~~~i~~~  330 (342)
T 1b6c_B          324 ALRIKKT  330 (342)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999876

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.94  E-value=2.2e-27  Score=188.76  Aligned_cols=134  Identities=21%  Similarity=0.337  Sum_probs=102.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+|||++.++  .+||+|||+++......  ......+++.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       139 ~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~~l~  215 (283)
T 3gen_A          139 KQFLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK-SDIWAFGVLMWEIY  215 (283)
T ss_dssp             TTCCCSSCSGGGEEECTTS--CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHH-HHHHHHHHHHHHHH
T ss_pred             CCccCCCCccceEEEcCCC--CEEEccccccccccccccccccCCccCcccCCHHHhccCCCCch-hhHHHHHHHHHHHH
Confidence            4899999999999998776  79999999987543221  1223346788999999987777544 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      + |+.||.........    ..+... ........++..+.+||.+||..+|.+|||+.++++|.
T Consensus       216 t~g~~p~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L  275 (283)
T 3gen_A          216 SLGKMPYERFTNSETA----EHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI  275 (283)
T ss_dssp             TTTCCTTTTSCHHHHH----HHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             hCCCCCccccChhHHH----HHHhcc-cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence            8 99999876543322    222222 12222345789999999999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.94  E-value=5.1e-27  Score=188.24  Aligned_cols=136  Identities=24%  Similarity=0.347  Sum_probs=102.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||++.......    ......+|..|+|||++.+..++.+ +|||||||++|+
T Consensus       145 ~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~  221 (302)
T 4e5w_A          145 RQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIA-SDVWSFGVTLHE  221 (302)
T ss_dssp             TTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCcccCCCchheEEEcCCC--CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcc-hhHHHHHHHHHH
Confidence            4899999999999998776  79999999997654432    2233467888999999988777644 999999999999


Q ss_pred             HHhCCCCCCCCC-----------ChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLVGAYPFEDPE-----------DPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~g~~pf~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++|..|+....           ........... .......+....+++.+.+||.+||..||.+|||+.++++
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          222 LLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT-LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH-HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHccCCCcchhhHHhhccCCcccccCHHHHHHH-HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            999998864321           11112222222 2222333444568999999999999999999999999886

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.94  E-value=2.7e-27  Score=207.11  Aligned_cols=145  Identities=28%  Similarity=0.364  Sum_probs=104.5

Q ss_pred             CceEecCCCCCcEEEcCCCC-CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~-~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++. ..+||+|||++.............|++.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       140 ~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~k-sDIwSLGviLyeLlt  218 (676)
T 3qa8_A          140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT-VDYWSFGTLAFECIT  218 (676)
T ss_dssp             TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTT-HHHHHHHHHHHHHHS
T ss_pred             CCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCch-hHHHHHHHHHHHHHH
Confidence            48999999999999986542 2489999999987665555566789999999999988888665 999999999999999


Q ss_pred             CCCCCCCCCChhHHHH-----HHHHHh-----cccc----cCCC----CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKT-----TIQRIL-----SVHY----SIPG----YVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~-----~~~~~~-----~~~~----~~~~----~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |..||........+..     ......     ....    ..+.    ...++..+.+||.+||.+||.+|||+.++++|
T Consensus       219 G~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h  298 (676)
T 3qa8_A          219 GFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV  298 (676)
T ss_dssp             SCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC
T ss_pred             CCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC
Confidence            9999975422111000     000000     0000    0111    11256789999999999999999999999999


Q ss_pred             cccCc
Q 027327          142 PWFLK  146 (225)
Q Consensus       142 p~~~~  146 (225)
                      |||..
T Consensus       299 p~F~~  303 (676)
T 3qa8_A          299 GCFQA  303 (676)
T ss_dssp             TTHHH
T ss_pred             HHHHH
Confidence            99964

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=9.6e-27  Score=187.51  Aligned_cols=136  Identities=28%  Similarity=0.426  Sum_probs=94.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+||+++.++  .+||+|||++........ .....+++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       155 ~~i~H~dl~p~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~~l~~  231 (310)
T 2wqm_A          155 RRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK-SDIWSLGCLLYEMAA  231 (310)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEECCC------------------CCSSCCHHHHTTCCCCHH-HHHHHHHHHHHHHHH
T ss_pred             CCeeCCCCcHHHEEEcCCC--CEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCch-hhHHHHHHHHHHHHh
Confidence            4899999999999998776  799999999875433222 234468999999999988777654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |..||.+....  .......+............++.++.+||.+||..||.+|||+.+++++
T Consensus       232 g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          232 LQSPFYGDKMN--LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             SSCTTC---CC--HHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCcccchh--HHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999764322  1223333333333322334688999999999999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.94  E-value=2.7e-27  Score=193.13  Aligned_cols=133  Identities=23%  Similarity=0.358  Sum_probs=101.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++.....   .......+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       193 ~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~el  269 (343)
T 1luf_A          193 RKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE-SDVWAYGVVLWEI  269 (343)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeecCCCCcceEEECCCC--eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcc-cccHHHHHHHHHH
Confidence            4899999999999998776  7999999998753322   22234467889999999987777654 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+.....    ....+..... .+....++..+.+||.+||..+|.+|||+.+++++
T Consensus       270 ~t~g~~p~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          270 FSYGLQPYYGMAHEE----VIYYVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HTTTCCTTTTSCHHH----HHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCcCCCCChHH----HHHHHhCCCc-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            98 999998755432    2222332222 12234688999999999999999999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=6.9e-27  Score=190.44  Aligned_cols=133  Identities=22%  Similarity=0.349  Sum_probs=102.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+|||++.++  .+||+|||+++......   ......+++.|+|||++.+..++.+ +|||||||++|+|
T Consensus       176 ~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el  252 (334)
T 2pvf_A          176 QKCIHRDLAARNVLVTENN--VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEI  252 (334)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHH-HHHHHHHHHHHHH
T ss_pred             CCeeCCCCccceEEEcCCC--CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChH-HHHHHHHHHHHHH
Confidence            4899999999999998776  79999999997544322   1223356788999999987777654 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |..||.+......    ...+... ...+....++..+.+||.+||..+|.+|||+.+++++
T Consensus       253 lt~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          253 FTLGGSPYPGIPVEEL----FKLLKEG-HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HTTSCCSSTTCCHHHH----HHHHHHT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCcCcCCHHHH----HHHHhcC-CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99 9999987554322    2222222 1223334689999999999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.94  E-value=1.6e-26  Score=182.32  Aligned_cols=129  Identities=23%  Similarity=0.268  Sum_probs=99.8

Q ss_pred             eEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCC--cccHHHHHHHHHHHHhC
Q 027327            3 ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGK--IADVWSCGVTLYVMLVG   80 (225)
Q Consensus         3 ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~--~~DiwslG~il~~ll~g   80 (225)
                      |+||||||+|||++.++  .++|+|||++...    ......+|+.|+|||++.+..+...  ++|||||||++|+|++|
T Consensus       134 i~H~dikp~Nil~~~~~--~~~l~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  207 (271)
T 3kmu_A          134 IPRHALNSRSVMIDEDM--TARISMADVKFSF----QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR  207 (271)
T ss_dssp             CTTCCCSGGGEEECTTS--CEEEEGGGSCCTT----SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHC
T ss_pred             eecCCCccceEEEcCCc--ceeEEeccceeee----cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhC
Confidence            99999999999998776  6888888776532    2234578999999999987655442  58999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +.||..........    .........+....++..+.+||.+||..||.+|||+.++++.
T Consensus       208 ~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (271)
T 3kmu_A          208 EVPFADLSNMEIGM----KVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI  264 (271)
T ss_dssp             SCTTTTSCHHHHHH----HHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCccccChHHHHH----HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99998765433222    2222233333344689999999999999999999999999863

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.93  E-value=2.4e-27  Score=192.57  Aligned_cols=137  Identities=24%  Similarity=0.397  Sum_probs=103.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||++.......    ......+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       146 ~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~  222 (327)
T 3lxl_A          146 RRCVHRDLAARNILVESEA--HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ-SDVWSFGVVLYE  222 (327)
T ss_dssp             TTEECSCCSGGGEEEEETT--EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCccCCCCChhhEEECCCC--CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChH-HhHHHHHHHHHH
Confidence            4899999999999998776  79999999997654332    1223457888999999987777544 999999999999


Q ss_pred             HHhCCCCCCCCCCh-----------hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLVGAYPFEDPEDP-----------RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~g~~pf~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++|+.||......           ........ ........+....++..+.+||.+||..||.+|||+.+++++
T Consensus       223 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          223 LFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE-LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHTTTCGGGSHHHHHHHHCC----CCHHHHHHH-HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCccccchhhhhcccccccccHHHHHH-HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999998643211           01112222 222223334445689999999999999999999999999765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=3.7e-27  Score=195.06  Aligned_cols=133  Identities=23%  Similarity=0.333  Sum_probs=94.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +||+||||||+|||++.++  .+||+|||+++.......     .....+++.|+|||++.+..++.+ +|||||||++|
T Consensus       211 ~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwSlG~il~  287 (373)
T 3c1x_A          211 KKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK-SDVWSFGVLLW  287 (373)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECCC---------------------CCGGGSCHHHHHHCCCCHH-HHHHHHHHHHH
T ss_pred             CCEecCccchheEEECCCC--CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcH-HHHHHHHHHHH
Confidence            4899999999999998776  799999999975432221     122356788999999987777654 99999999999


Q ss_pred             HHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           76 VMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        76 ~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +|++ |.+||...........    +.... .......++..+.++|.+||..+|.+|||+.+++++
T Consensus       288 ellt~~~~p~~~~~~~~~~~~----~~~~~-~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          288 ELMTRGAPPYPDVNTFDITVY----LLQGR-RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHTTSCCSCTTSCSSCHHHH----HHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCcCCCCCCCCHHHHHHH----HHcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999 7788876554433222    22221 222234588999999999999999999999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.5e-26  Score=185.11  Aligned_cols=134  Identities=25%  Similarity=0.359  Sum_probs=100.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+|||++.++  .+||+|||+++.....     .......+++.|+|||.+.+..++.+ +|||||||++|
T Consensus       143 ~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~  219 (298)
T 3pls_A          143 QKFVHRDLAARNCMLDESF--TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK-SDVWSFGVLLW  219 (298)
T ss_dssp             TTCCCSCCSGGGEEECTTC--CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHH-HHHHHHHHHHH
T ss_pred             CCcccCCCCcceEEEcCCC--cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChh-hchhhHHHHHH
Confidence            4899999999999998776  7999999999754322     22233457889999999988777655 99999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +|++|..||..............   . ....+....++..+.+|+.+||..+|.+|||+.++++.
T Consensus       220 ~l~~g~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          220 ELLTRGAPPYRHIDPFDLTHFLA---Q-GRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             HHHHTSCCTTTTSCGGGHHHHHH---T-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhhCCCCCCccCCHHHHHHHhh---c-CCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99996555444333333332222   1 12233344689999999999999999999999998864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.93  E-value=1.2e-27  Score=193.99  Aligned_cols=139  Identities=24%  Similarity=0.265  Sum_probs=99.2

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      ||+||||||+|||++.++  .+||+|||+++.......  .....||+.|+|||++.+..++.+ +|||||||++|+|++
T Consensus       154 ~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~  230 (326)
T 3uim_A          154 KIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGVMLLELIT  230 (326)
T ss_dssp             CEECCCCSGGGEEECTTC--CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHH-HHHHHHHHHHHHHHH
T ss_pred             CeEeCCCchhhEEECCCC--CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCcc-ccchhHHHHHHHHHh
Confidence            899999999999998776  799999999976543222  223458999999999987777544 999999999999999


Q ss_pred             CCCCCCCC----CChhHHHHHHHHHhcccc---------cCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           80 GAYPFEDP----EDPRNFKTTIQRILSVHY---------SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        80 g~~pf~~~----~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      |+.||...    ..................         ........+..+.+|+.+||..+|.+|||+.++++|..
T Consensus       231 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          231 GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             CCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             CCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            99999521    111111111111111100         00001112357899999999999999999999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.93  E-value=1.2e-26  Score=185.45  Aligned_cols=132  Identities=23%  Similarity=0.338  Sum_probs=100.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||++........    .....+++.|+|||++.+..++.+ +||||||+++|+
T Consensus       136 ~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~  212 (291)
T 1xbb_A          136 SNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK-SDVWSFGVLMWE  212 (291)
T ss_dssp             TTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCeEcCCCCcceEEEeCCC--cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChh-hhHHHHHHHHHH
Confidence            4899999999999998776  799999999875433322    112346788999999987777544 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++ |+.||.......    ....+.... ..+....++..+.++|.+||..||.+|||+.++++
T Consensus       213 l~~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          213 AFSYGQKPYRGMKGSE----VTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHTTTCCSSTTCCHHH----HHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhcCCCCCCCCCHHH----HHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999 999998755432    222222221 22233468999999999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.93  E-value=1.1e-26  Score=184.44  Aligned_cols=132  Identities=25%  Similarity=0.375  Sum_probs=102.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+||+++.++  .+||+|||++.......  ......+++.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       128 ~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~  204 (279)
T 1qpc_A          128 RNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK-SDVWSFGILLTEIV  204 (279)
T ss_dssp             TTEECSCCSGGGEEECTTS--CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHH-HHHHHHHHHHHHHH
T ss_pred             CCeeccCCCHhhEEEcCCC--CEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCch-hhhHHHHHHHHHHH
Confidence            4899999999999998766  79999999997654322  1223356788999999987777544 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||........    ...+... ........++..+.+|+.+||..+|.+|||+.++++
T Consensus       205 ~~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          205 THGRIPYPGMTNPEV----IQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             TTTCCSSTTCCHHHH----HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCcccCHHHH----HHHHhcc-cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            9 9999987554332    2222222 222333468999999999999999999999999876

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.93  E-value=5.4e-27  Score=198.63  Aligned_cols=132  Identities=23%  Similarity=0.368  Sum_probs=99.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......  .....+++.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       299 ~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDvwslG~~l~el~  375 (452)
T 1fmk_A          299 MNYVHRDLRAANILVGENL--VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELT  375 (452)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHHH
T ss_pred             CCeeCCCCChhhEEECCCC--CEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCcc-ccHHhHHHHHHHHH
Confidence            4899999999999998766  799999999976433221  122346788999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |+.||.+......    ...+.. ....+....++..+.+||.+||..+|.+|||+.++++
T Consensus       376 t~g~~P~~~~~~~~~----~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          376 TKGRVPYPGMVNREV----LDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             TTTCCSSTTCCHHHH----HHHHHT-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCCCCHHHH----HHHHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9 9999987654332    222222 2333444568999999999999999999999999886

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=6e-27  Score=200.44  Aligned_cols=132  Identities=22%  Similarity=0.380  Sum_probs=103.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......  .....+++.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       337 ~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDvwSlG~~l~el~  413 (495)
T 1opk_A          337 KNFIHRNLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK-SDVWAFGVLLWEIA  413 (495)
T ss_dssp             TTEECSCCSGGGEEECGGG--CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHH-HHHHHHHHHHHHHH
T ss_pred             CCcccCCCChhhEEECCCC--cEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcH-HhHHhHHHHHHHHH
Confidence            4899999999999998766  799999999986533221  122346778999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      + |..||.+........ .   + ......+....++..+.+||.+||..+|.+|||+.+|++
T Consensus       414 t~g~~p~~~~~~~~~~~-~---~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          414 TYGMSPYPGIDLSQVYE-L---L-EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             TTSCCSSTTCCGGGHHH-H---H-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCCCCHHHHHH-H---H-HcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            8 999998766543222 1   1 222333444568999999999999999999999999976

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.93  E-value=7.5e-27  Score=193.20  Aligned_cols=133  Identities=21%  Similarity=0.396  Sum_probs=92.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +||+||||||+|||++.++  .+||+|||+++........    ....+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       166 ~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~SlG~il~e  242 (373)
T 2qol_A          166 MGYVHRDLAARNILINSNL--VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWE  242 (373)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECCC----------------------CTTSCHHHHHHCCCCHH-HHHHHHHHHHHH
T ss_pred             CCeeCCCCCcceEEEcCCC--CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCch-hcHHHHHHHHHH
Confidence            4899999999999998776  7999999999765432211    12235678999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++ |+.||........    ...+.. ....+....++..+.+|+.+||..+|.+||++.++++.
T Consensus       243 llt~g~~P~~~~~~~~~----~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~  303 (373)
T 2qol_A          243 VMSYGERPYWEMSNQDV----IKAVDE-GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI  303 (373)
T ss_dssp             HHTTC-CTTTTCCHHHH----HHHHHT-TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHH----HHHHHc-CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence            997 9999977554322    222222 23334445688999999999999999999999998763

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.93  E-value=1e-26  Score=184.64  Aligned_cols=130  Identities=22%  Similarity=0.378  Sum_probs=96.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      .||+||||||+||+++.++  .+||+|||++......  .....+++.|+|||++.+..++.+ +||||||+++|+|++ 
T Consensus       136 ~~i~H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~t~  210 (278)
T 1byg_A          136 NNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSF  210 (278)
T ss_dssp             TTCCCSCCSGGGEEECTTS--CEEECCCCC--------------CCTTTSCHHHHHHCCCCHH-HHHHHHHHHHHHHHTT
T ss_pred             CCccccCCCcceEEEeCCC--cEEEeecccccccccc--ccCCCccccccCHHHhCCCCCCch-hcHHHHHHHHHHHHhC
Confidence            4899999999999998766  7999999998754322  223457889999999987777654 999999999999998 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |+.||.........    ..+.. ....+....+++.+.++|.+||..||.+|||+.++++
T Consensus       211 g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          211 GRVPYPRIPLKDVV----PRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             SCCSCTTSCGGGHH----HHHTT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCHHHHH----HHHhc-CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            99999876543322    22222 2223334468999999999999999999999999876

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.93  E-value=9.6e-27  Score=188.41  Aligned_cols=137  Identities=26%  Similarity=0.375  Sum_probs=102.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||++........    .....+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       153 ~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~  229 (318)
T 3lxp_A          153 QHYIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYE  229 (318)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCccCCCCchheEEEcCCC--CEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcH-HHHHHHHHHHHH
Confidence            4899999999999998776  799999999976543321    223457888999999987777644 899999999999


Q ss_pred             HHhCCCCCCCCCCh----------hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLVGAYPFEDPEDP----------RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~g~~pf~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++|..||......          .................+....++..+.+||.+||..||.+|||+.++++
T Consensus       230 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          230 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99999999653211          00111112222223334444568999999999999999999999999985

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.5e-26  Score=188.54  Aligned_cols=133  Identities=21%  Similarity=0.404  Sum_probs=97.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||+++.......    .....+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       166 ~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~e  242 (333)
T 1mqb_A          166 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA-SDVWSFGIVMWE  242 (333)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHH-HHHHHHHHHHHH
T ss_pred             CCeeCCCCChheEEECCCC--cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCch-hhhHHHHHHHHH
Confidence            4899999999999998766  799999999976543221    112245778999999987777654 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++ |+.||.......    ....+... ...+....++..+.+||.+||..+|.+||++.+++++
T Consensus       243 llt~g~~pf~~~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          243 VMTYGERPYWELSNHE----VMKAINDG-FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHTTSCCTTTTCCHHH----HHHHHHTT-CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHcCCCCCcccCCHHH----HHHHHHCC-CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            998 999997655432    22222222 2333445688999999999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.93  E-value=3.8e-27  Score=196.36  Aligned_cols=138  Identities=30%  Similarity=0.475  Sum_probs=101.3

Q ss_pred             CceEecCCCCCcEEE----cCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC--------CccCCCcccHH
Q 027327            1 MQICHRDLKLENTLL----DGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR--------KEYDGKIADVW   68 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~----~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~--------~~~~~~~~Diw   68 (225)
                      .|||||||||+|||+    +.++  .+||+|||+++............||+.|+|||++.+        ..++ .++|||
T Consensus       131 ~~ivH~Dlkp~NIll~~~~~~~~--~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~-~~~Diw  207 (396)
T 4eut_A          131 NGIVHRNIKPGNIMRVIGEDGQS--VYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYG-ATVDLW  207 (396)
T ss_dssp             TTEECCCCCGGGEEEEECTTSCE--EEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHH-HHHHHH
T ss_pred             CCEEECCcCHHHEEEeecCCCce--eEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCC-cHHHHH
Confidence            489999999999998    4333  699999999987655555556679999999999864        3343 448999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccc-------------------cCCCCCC----CCHHHHHHHHhhc
Q 027327           69 SCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-------------------SIPGYVR----VSLECRHLLSRIF  125 (225)
Q Consensus        69 slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~----~~~~~~~li~~~l  125 (225)
                      ||||++|+|++|+.||............+.++.....                   ..+....    ++..+.+||.+||
T Consensus       208 SlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L  287 (396)
T 4eut_A          208 SIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL  287 (396)
T ss_dssp             HHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhh
Confidence            9999999999999999764443333344444433221                   1111112    3456789999999


Q ss_pred             ccCCCCCCCHHHHhcC
Q 027327          126 VADPEKRITIPEIQKH  141 (225)
Q Consensus       126 ~~dP~~R~s~~eil~h  141 (225)
                      ..||++|||+.+++++
T Consensus       288 ~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          288 EADQEKCWGFDQFFAE  303 (396)
T ss_dssp             CCCTTTSCCHHHHHHH
T ss_pred             ccChhhhccHHHHHHH
Confidence            9999999999998664

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=1.5e-27  Score=191.49  Aligned_cols=125  Identities=34%  Similarity=0.660  Sum_probs=87.7

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .||+||||||+|||++... .+.+||+|||++....                     +..++ .++|||||||++|+|++
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------~~~~~-~~~DiwslG~il~el~t  193 (299)
T 3m2w_A          136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------------GEKYD-KSCDMWSLGVIMYILLC  193 (299)
T ss_dssp             TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---------------------TCGGG-GHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc---------------------cccCC-chhhHHHHHHHHHHHHH
Confidence            4899999999999998632 2379999999986421                     12343 34999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+.||...............+.......+  ....++.++++||.+||..||.+|||+.++++||||.+.
T Consensus       194 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          194 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             SSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred             CCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence            99999764332111000001111111111  113578999999999999999999999999999999764

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.93  E-value=3.4e-26  Score=184.80  Aligned_cols=134  Identities=22%  Similarity=0.279  Sum_probs=96.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC------CCCCCcccCCCCCccccccCCc--------cCCCccc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH------SQPKSTVGTPAYIAPEVLSRKE--------YDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~------~~~~~~~g~~~y~aPE~l~~~~--------~~~~~~D   66 (225)
                      .||+||||||+|||++. +  .+||+|||+++.....      .......|++.|+|||++.+..        ..+.++|
T Consensus       149 ~~i~H~dlkp~NIl~~~-~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~D  225 (319)
T 2y4i_B          149 KGILHKDLKSKNVFYDN-G--KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD  225 (319)
T ss_dssp             TTCCCCCCCSTTEEEC-----CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHH
T ss_pred             CCccccCCChhhEEEeC-C--CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhh
Confidence            48999999999999973 3  6999999998643211      1222345889999999986521        1234599


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ||||||++|+|++|+.||........    ...+............++.++.+||.+||..+|.+|||+.++++.
T Consensus       226 i~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          226 VFALGTIWYELHAREWPFKTQPAEAI----IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             HHHHHHHHHHHHHSSCSSSSCCHHHH----HHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHH----HHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            99999999999999999986554322    222323222222233578899999999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.93  E-value=5.1e-27  Score=190.61  Aligned_cols=140  Identities=19%  Similarity=0.319  Sum_probs=105.4

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++ ...+||+|||++......   .......+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       159 ~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~e  237 (327)
T 2yfx_A          159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK-TDTWSFGVLLWE  237 (327)
T ss_dssp             TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHH
T ss_pred             CCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCch-hhHHHHHHHHHH
Confidence            4899999999999997433 226999999998643222   12234467889999999987777654 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      |++ |..||.......    ....+.... .......++..+.+||.+||..+|.+|||+.++++|+|+..
T Consensus       238 llt~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          238 IFSLGYMPYPSKSNQE----VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HHTTSCCSSTTCCHHH----HHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCcCHHH----HHHHHhcCC-CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            998 999997654322    222222222 22233468999999999999999999999999999988754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.93  E-value=5.5e-27  Score=186.93  Aligned_cols=133  Identities=18%  Similarity=0.232  Sum_probs=96.3

Q ss_pred             CceEecCCCCCcEEEcCCCCC------CEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAP------RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~------~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      +||+||||||+|||++.++..      .+||+|||++......   ....+++.|+|||++.+....+.++|||||||++
T Consensus       132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  208 (289)
T 4fvq_A          132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTL  208 (289)
T ss_dssp             TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred             CCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH
Confidence            489999999999999766521      2999999998643221   2345889999999998734334559999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      |+|++|..|+............    .......+  ...+.++.+||.+||+.||.+|||+.++++|-
T Consensus       209 ~el~~g~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l  270 (289)
T 4fvq_A          209 WEICSGGDKPLSALDSQRKLQF----YEDRHQLP--APKAAELANLINNCMDYEPDHRPSFRAIIRDL  270 (289)
T ss_dssp             HHHHTTTCCTTTTSCHHHHHHH----HHTTCCCC--CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             HHHHcCCCCCccccchHHHHHH----hhccCCCC--CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            9999965544433332222221    11222222  24678899999999999999999999999863

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.93  E-value=8.6e-27  Score=185.74  Aligned_cols=132  Identities=23%  Similarity=0.388  Sum_probs=102.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      ||+||||||+||+++.++  .+||+|||++........  .....+++.|+|||++.+..++.+ +||||||+++|+|++
T Consensus       131 ~i~H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~ll~  207 (288)
T 3kfa_A          131 NFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK-SDVWAFGVLLWEIAT  207 (288)
T ss_dssp             TCCCSCCSGGGEEECGGG--CEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHHHT
T ss_pred             CccCCCCCcceEEEcCCC--CEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCch-hhHHHHHHHHHHHHh
Confidence            799999999999998766  799999999976543322  122346788999999987777644 999999999999999


Q ss_pred             -CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 -GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                       |..||.......... ..    ......+....++..+.+||.+||..||.+|||+.++++.
T Consensus       208 ~g~~p~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~  265 (288)
T 3kfa_A          208 YGMSPYPGIDLSQVYE-LL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA  265 (288)
T ss_dssp             TSCCSSTTCCGGGHHH-HH----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHH-HH----hccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence             999998765543222 21    1122333345689999999999999999999999999763

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.93  E-value=2.3e-26  Score=201.43  Aligned_cols=132  Identities=25%  Similarity=0.360  Sum_probs=99.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----CCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|||||||||+|||++.++  .+||+|||+++........    ....+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       455 ~~iiHrDlkp~NILl~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~-sDvwSlGv~l~e  531 (613)
T 2ozo_A          455 KNFVHRNLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR-SDVWSYGVTMWE  531 (613)
T ss_dssp             TTCCCSCCSGGGEEEEETT--EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHH-HHHHHHHHHHHH
T ss_pred             CCEEcCcCCHHHEEEcCCC--cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcH-HHHHHHHHHHHH
Confidence            4899999999999998776  7999999999865332221    12235688999999987777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++ |+.||.+.......    ..+... ...+....++.++.+||.+||..+|.+||++.++++
T Consensus       532 llt~G~~Pf~~~~~~~~~----~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          532 ALSYGQKPYKKMKGPEVM----AFIEQG-KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHTTSCCTTTTCCSHHHH----HHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHCCCCCCCCCCHHHHH----HHHHcC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            998 99999887664332    222222 233334468999999999999999999999999854

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.93  E-value=1.4e-26  Score=186.25  Aligned_cols=137  Identities=27%  Similarity=0.374  Sum_probs=99.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .||+||||||+||+++.++  .+||+|||++........   .....|++.|+|||++.+. ++ .++||||||+++|+|
T Consensus       152 ~~i~H~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~-~~~Dv~slG~il~~l  227 (307)
T 2nru_A          152 NHHIHRDIKSANILLDEAF--TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-IT-PKSDIYSFGVVLLEI  227 (307)
T ss_dssp             TTEECSCCCGGGEEECTTC--CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE-EC-THHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCC--cEEEeecccccccccccccccccccCCCcCcCChHHhcCC-CC-ccchhHHHHHHHHHH
Confidence            4899999999999998776  799999999875433221   2334689999999998653 54 459999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccc--------cC-CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHY--------SI-PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++|..||...........+...+.....        .. ......+..+.+++.+||..+|.+|||+.+++++
T Consensus       228 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          228 ITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            9999999875543322222222211110        00 1111244678999999999999999999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.93  E-value=1.4e-26  Score=185.44  Aligned_cols=133  Identities=23%  Similarity=0.341  Sum_probs=99.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      .||+||||||+|||++.++  .+||+|||+++......     ......+++.|+|||++.+..++.+ +||||||+++|
T Consensus       147 ~~i~H~dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~  223 (298)
T 3f66_A          147 KKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK-SDVWSFGVLLW  223 (298)
T ss_dssp             TTCCCSCCSGGGEEECTTC--CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHH-HHHHHHHHHHH
T ss_pred             CCccCCCCchheEEECCCC--CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChH-HHHHHHHHHHH
Confidence            4899999999999998776  79999999997543322     1223457788999999987777654 99999999999


Q ss_pred             HHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           76 VMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        76 ~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +|++ |.+||...........    +.... .......++..+.+++.+||..+|.+|||+.++++.
T Consensus       224 ~l~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  285 (298)
T 3f66_A          224 ELMTRGAPPYPDVNTFDITVY----LLQGR-RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  285 (298)
T ss_dssp             HHHTTSCCSSTTSCTTTHHHH----HHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCccCCHHHHHHH----HhcCC-CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999 5667765544332222    22222 222234578999999999999999999999998863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=8.5e-27  Score=183.72  Aligned_cols=133  Identities=23%  Similarity=0.434  Sum_probs=101.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC--CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH--SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~--~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+||+++.++  .+||+|||++......  .......+++.|+|||++.+..++. ++||||||+++|+|+
T Consensus       123 ~~i~H~dl~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~il~~l~  199 (267)
T 3t9t_A          123 ACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS-KSDVWSFGVLMWEVF  199 (267)
T ss_dssp             TTCCCSSCCGGGEEECGGG--CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCH-HHHHHHHHHHHHHHH
T ss_pred             CCcccCCCchheEEECCCC--CEEEcccccccccccccccccccccccccccChhhhcCCCccc-hhchhhhHHHHHHHh
Confidence            4899999999999998766  6999999998754322  1122345678899999998777754 499999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||.......    ....+... ........++..+.+|+.+||..+|.+|||+.+++++
T Consensus       200 ~~g~~p~~~~~~~~----~~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          200 SEGKIPYENRSNSE----VVEDISTG-FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TTSCCTTTTCCHHH----HHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCCCCCCCCHHH----HHHHHhcC-CcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9 899998754432    22223222 1222234578999999999999999999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.93  E-value=2.6e-26  Score=185.13  Aligned_cols=133  Identities=25%  Similarity=0.342  Sum_probs=91.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  .+||+|||++.......  ......+++.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       153 ~~i~H~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~  229 (309)
T 2h34_A          153 AGATHRDVKPENILVSADD--FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYR-ADIYALTCVLYECL  229 (309)
T ss_dssp             TTCCCSCCCGGGEEECTTS--CEEECSCCC----------------CCGGGCCGGGTCC----CC-CHHHHHHHHHHHHH
T ss_pred             CcCCcCCCChHHEEEcCCC--CEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCch-HhHHHHHHHHHHHH
Confidence            4899999999999998776  79999999987544322  2234468999999999988777655 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccc-cCCCCCCCCHHHHHHHHhhcccCCCCCC-CHHHHhc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHY-SIPGYVRVSLECRHLLSRIFVADPEKRI-TIPEIQK  140 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R~-s~~eil~  140 (225)
                      +|+.||......    .....+..... .......++..+.+||.+||..||.+|| +++++++
T Consensus       230 ~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          230 TGSPPYQGDQLS----VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HSSCSSCSCHHH----HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HCCCCCCCchHH----HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            999999764322    11112221111 1122345889999999999999999999 8888775

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=3.5e-26  Score=185.66  Aligned_cols=137  Identities=22%  Similarity=0.339  Sum_probs=101.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++.++  .+||+|||++........    .....++..|+|||++.+..++.+ +|||||||++|+
T Consensus       164 ~~ivH~dikp~NIli~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~e  240 (326)
T 2w1i_A          164 KRYIHRDLATRNILVENEN--RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYE  240 (326)
T ss_dssp             TTEECSCCCGGGEEEEETT--EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCEeccCCCcceEEEcCCC--cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCch-hhHHHHHHHHHH
Confidence            4899999999999998776  799999999976543322    223356778999999987777544 999999999999


Q ss_pred             HHhCCCCCCCCCC-----------hhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLVGAYPFEDPED-----------PRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++|..||.....           ..................+....++.++.+||.+||..||.+|||+.++++
T Consensus       241 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          241 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999864210           011111111222222233444568999999999999999999999999885

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.93  E-value=1.7e-26  Score=202.91  Aligned_cols=132  Identities=23%  Similarity=0.324  Sum_probs=99.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......    .....+++.|+|||++.+..++.+ +|||||||++|+
T Consensus       488 ~~iiHrDLkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~-sDvwSlGv~l~e  564 (635)
T 4fl3_A          488 SNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK-SDVWSFGVLMWE  564 (635)
T ss_dssp             TTCCCSCCSGGGEEEEETT--EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHH-HHHHHHHHHHHH
T ss_pred             CCEeCCCCChHhEEEeCCC--CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcH-HHHHHHHHHHHH
Confidence            4899999999999998776  799999999975543221    122346788999999988777655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++ |+.||.+......    ...+... ...+....++.++.+||.+||..||.+|||+.+|++
T Consensus       565 llt~G~~Pf~~~~~~~~----~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          565 AFSYGQKPYRGMKGSEV----TAMLEKG-ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHTTTCCSSTTCCHHHH----HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHH----HHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            998 9999987654332    2222222 223334468999999999999999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=1.2e-26  Score=187.43  Aligned_cols=136  Identities=29%  Similarity=0.415  Sum_probs=99.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC----------CCcccCCCCCccccccCCcc--CCCcccHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP----------KSTVGTPAYIAPEVLSRKEY--DGKIADVW   68 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~----------~~~~g~~~y~aPE~l~~~~~--~~~~~Diw   68 (225)
                      .||+||||||+|||++.++  .+||+|||++.........          ....|++.|+|||++.+...  .+.++|||
T Consensus       153 ~~ivH~dlkp~NIl~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~  230 (317)
T 2buj_A          153 KGYAHRDLKPTNILLGDEG--QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVW  230 (317)
T ss_dssp             TTEECCCCCGGGEEECTTS--CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHH
T ss_pred             CCcccCCCCHHHEEEcCCC--CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHH
Confidence            4899999999999998776  7999999998754321111          12347999999999875442  23459999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           69 SCGVTLYVMLVGAYPFEDPEDP-RNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        69 slG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      ||||++|+|++|+.||...... .....    ........+....++..+.+||.+||..||.+|||+.+++++.
T Consensus       231 slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L  301 (317)
T 2buj_A          231 SLGCVLYAMMFGEGPYDMVFQKGDSVAL----AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL  301 (317)
T ss_dssp             HHHHHHHHHHHSSCTTHHHHHTTSCHHH----HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCChhhhhcccchhhH----HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence            9999999999999999531100 01111    1112333444456899999999999999999999999999874

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.92  E-value=2.9e-26  Score=197.93  Aligned_cols=133  Identities=23%  Similarity=0.369  Sum_probs=103.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+++......  ......++..|+|||++.+..++.+ +|||||||++|+|+
T Consensus       382 ~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDvwSlGv~l~el~  458 (535)
T 2h8h_A          382 MNYVHRDLRAANILVGENL--VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELT  458 (535)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHHT
T ss_pred             CCeeCCCCCHhhEEEcCCC--cEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCch-hhHHHHHHHHHHHH
Confidence            5899999999999998766  79999999997543221  1123346778999999987777655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |+.||.+......    ...+.. ....+....++..+.+||.+||..+|.+|||+.+|++.
T Consensus       459 t~g~~P~~~~~~~~~----~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~  517 (535)
T 2h8h_A          459 TKGRVPYPGMVNREV----LDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF  517 (535)
T ss_dssp             TTTCCSSTTCCHHHH----HHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hCCCCCCCCCCHHHH----HHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9 9999987654332    222222 23334445689999999999999999999999998863

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.92  E-value=4.6e-26  Score=200.78  Aligned_cols=133  Identities=23%  Similarity=0.404  Sum_probs=100.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  .+||+|||+++........  ....+++.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       510 ~givHrDikp~NILl~~~~--~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwSlG~il~ell  586 (656)
T 2j0j_A          510 KRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL  586 (656)
T ss_dssp             TTCCCSCCSGGGEEEEETT--EEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHHH
T ss_pred             CCccccccchHhEEEeCCC--CEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCch-hhHHHHHHHHHHHH
Confidence            4899999999999998776  7999999999865433222  22346788999999987777654 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |..||.+.......    ..+... ...+....+++.+.+||.+||..||.+|||+.++++.
T Consensus       587 t~g~~Pf~~~~~~~~~----~~i~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          587 MHGVKPFQGVKNNDVI----GRIENG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             TTSCCTTTTCCHHHHH----HHHHHT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCCCCCCCHHHHH----HHHHcC-CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            7 99999876543322    222222 1223334689999999999999999999999999864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.92  E-value=6.9e-26  Score=186.69  Aligned_cols=127  Identities=19%  Similarity=0.217  Sum_probs=93.9

Q ss_pred             CceEecCCCCCcEEEcC-----------CCCCCEEEecCCCccCCC---CCCCCCCcccCCCCCccccccCCccCCCccc
Q 027327            1 MQICHRDLKLENTLLDG-----------SKAPRLKICDFGYSKSSV---LHSQPKSTVGTPAYIAPEVLSRKEYDGKIAD   66 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~-----------~~~~~vkl~Dfg~a~~~~---~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~D   66 (225)
                      .|||||||||+|||++.           ++  .+||+|||+|+...   ........+||+.|+|||++.+..++.+ +|
T Consensus       191 ~~ivHrDiKp~NIll~~~~~~~~~~~~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~D  267 (365)
T 3e7e_A          191 CEIIHGDIKPDNFILGNGFLEQDDEDDLSA--GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ-ID  267 (365)
T ss_dssp             TTEECCCCSGGGEEECGGGTCC------CT--TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTH-HH
T ss_pred             CCeecCCCCHHHEEecccccCccccccccC--CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcc-cc
Confidence            48999999999999976           44  79999999996432   2223345579999999999988887654 99


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           67 VWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        67 iwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ||||||++|+|++|+.||.......         .......... ..+..+.+++.+||+.+|.+|++..+.+.
T Consensus       268 iwslG~il~elltg~~pf~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~l~~~p~~r~~~~~~l~  331 (365)
T 3e7e_A          268 YFGVAATVYCMLFGTYMKVKNEGGE---------CKPEGLFRRL-PHLDMWNEFFHVMLNIPDCHHLPSLDLLR  331 (365)
T ss_dssp             HHHHHHHHHHHHHSSCCCEEEETTE---------EEECSCCTTC-SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred             HHHHHHHHHHHHhCCCccccCCCCc---------eeechhcccc-CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence            9999999999999999996432211         0011111111 24677899999999999999976544444

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.90  E-value=1.4e-25  Score=182.89  Aligned_cols=131  Identities=12%  Similarity=0.150  Sum_probs=93.5

Q ss_pred             CceEecCCCCCcEEEcCCCC------------------CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCC
Q 027327            1 MQICHRDLKLENTLLDGSKA------------------PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG   62 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~------------------~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~   62 (225)
                      +|||||||||+|||++.++.                  ..+||+|||+|+....    ...+||+.|+|||++.+..  .
T Consensus       181 ~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~----~~~~gt~~y~aPE~~~g~~--~  254 (336)
T 2vuw_A          181 LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD----GIVVFCDVSMDEDLFTGDG--D  254 (336)
T ss_dssp             HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET----TEEECCCCTTCSGGGCCCS--S
T ss_pred             CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC----CcEEEeecccChhhhcCCC--c
Confidence            38999999999999986641                  1699999999985432    2457999999999998665  3


Q ss_pred             CcccHHHHHHH-HHHHHhCCCCCCCCCChhHHHHHHHHHhcc-cccCCC----CCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           63 KIADVWSCGVT-LYVMLVGAYPFEDPEDPRNFKTTIQRILSV-HYSIPG----YVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        63 ~~~DiwslG~i-l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      .++||||++++ .++++.|..||.....   .......+... ......    ...+++++++||++||++|     |+.
T Consensus       255 ~~~Diwsl~~~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~  326 (336)
T 2vuw_A          255 YQFDIYRLMKKENNNRWGEYHPYSNVLW---LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT  326 (336)
T ss_dssp             HHHHHHHHHHHHHTTCTTSCCTHHHHHH---HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred             cceehhhhhCCCCcccccccCCCcchhh---hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence            45999998776 7778889998843110   01122222211 111111    1236788999999999976     999


Q ss_pred             HHh-cCcccC
Q 027327          137 EIQ-KHPWFL  145 (225)
Q Consensus       137 eil-~hp~~~  145 (225)
                      ++| +||||+
T Consensus       327 e~l~~Hp~f~  336 (336)
T 2vuw_A          327 DLLCQHSLFK  336 (336)
T ss_dssp             HHHHHCGGGC
T ss_pred             HHHhcCCCcC
Confidence            999 999994

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1e-24  Score=193.15  Aligned_cols=125  Identities=22%  Similarity=0.238  Sum_probs=96.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .|||||||||+|||++.+   .+||+|||+++.....   ....||+.|+|||++.+..  +.++|||||||++|+|++|
T Consensus       201 ~giiHrDlkp~NIll~~~---~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~~--~~~sDi~slG~~l~~l~~g  272 (681)
T 2pzi_A          201 IGLVYNDLKPENIMLTEE---QLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTGP--TVATDIYTVGRTLAALTLD  272 (681)
T ss_dssp             TTEECCCCSGGGEEECSS---CEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHCS--CHHHHHHHHHHHHHHHHSC
T ss_pred             CCCeecccChHHeEEeCC---cEEEEecccchhcccC---CccCCCccccCHHHHcCCC--CCceehhhhHHHHHHHHhC
Confidence            489999999999999864   6999999999865432   4557999999999986543  4459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      ..||.+.....            ..........++.+.+||.+||..||.+||+..+++.|+|+.
T Consensus       273 ~~~~~~~~~~~------------~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          273 LPTRNGRYVDG------------LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             CCEETTEECSS------------CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CCCCccccccc------------ccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            98886421100            000000012457899999999999999999999988888763

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.80  E-value=3.6e-21  Score=153.56  Aligned_cols=110  Identities=9%  Similarity=0.056  Sum_probs=77.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      .||+||||||+|||++.++  .+||++++                   |++|       + +.++|||||||++|+|++|
T Consensus       148 ~givH~Dikp~NIll~~~g--~~kl~~~~-------------------~~~~-------~-~~~~Di~slG~il~elltg  198 (286)
T 3uqc_A          148 AGVALSIDHPSRVRVSIDG--DVVLAYPA-------------------TMPD-------A-NPQDDIRGIGASLYALLVN  198 (286)
T ss_dssp             TTCCCCCCSGGGEEEETTS--CEEECSCC-------------------CCTT-------C-CHHHHHHHHHHHHHHHHHS
T ss_pred             CCCccCCCCcccEEEcCCC--CEEEEecc-------------------ccCC-------C-CchhHHHHHHHHHHHHHHC
Confidence            4899999999999998776  68987443                   3333       3 3449999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      +.||.+......+..... ........  .....++.++.+||.+||+.||.+| |+.++++.
T Consensus       199 ~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          199 RWPLPEAGVRSGLAPAER-DTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             EECSCCCSBCCCSEECCB-CTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             CCCCCcCCcchhhHHHHH-HhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            999987544221100000 00000000  0113588999999999999999999 99999874

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.70  E-value=3.4e-20  Score=160.86  Aligned_cols=76  Identities=16%  Similarity=0.185  Sum_probs=47.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      .|||||||||+|||++.++  .+||+|||+|+...... ...+.+||+.|+|||++.+.. ... +|+||+|++++.+..
T Consensus       358 ~GIIHRDIKPeNILL~~dg--~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~-~~~-~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          358 QGFWHDDVRPWNVMVDARQ--HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENK-SWN-GFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             TTCEESCCCGGGEEECTTS--CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC-------------------CCCCT
T ss_pred             CCceeccCchHhEEECCCC--CEEEeecccCeeCCCCCccccCceechhhccHHHhCCCC-CCc-ccccccccchhhhcc
Confidence            5899999999999998777  79999999998654432 334557999999999997653 334 899999999887654


Q ss_pred             C
Q 027327           80 G   80 (225)
Q Consensus        80 g   80 (225)
                      +
T Consensus       434 ~  434 (569)
T 4azs_A          434 P  434 (569)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.34  E-value=4.4e-14  Score=121.90  Aligned_cols=80  Identities=26%  Similarity=0.336  Sum_probs=63.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--------CCCcccCCCCCccccccC--CccCCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--------PKSTVGTPAYIAPEVLSR--KEYDGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~l~~--~~~~~~~~Diwsl   70 (225)
                      +|||||||||+|||++.    .+||+|||+++.......        .....||+.|+|||++..  ..|... +|+|+.
T Consensus       450 ~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~-~d~ws~  524 (540)
T 3en9_A          450 NDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSV-YDRWEI  524 (540)
T ss_dssp             TTEECTTCCTTSEEESS----SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH-CTTHHH
T ss_pred             CcCccCCCCHHHEEECC----eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHH-HhHHHH
Confidence            58999999999999986    599999999986543221        124579999999999976  556544 799999


Q ss_pred             HHHHHHHHhCCCCCC
Q 027327           71 GVTLYVMLVGAYPFE   85 (225)
Q Consensus        71 G~il~~ll~g~~pf~   85 (225)
                      .+-..+.+.++.+|.
T Consensus       525 vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          525 ILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHTCSCCC
T ss_pred             HHHHHHHHHhccccC
Confidence            998888888777763

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.86  E-value=7.1e-10  Score=87.92  Aligned_cols=41  Identities=29%  Similarity=0.247  Sum_probs=34.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCcccccc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS   56 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~   56 (225)
                      .|||||||||+|||++ ++  .+||+|||+|+.            +..++|||.+.
T Consensus       212 ~giiHrDlkp~NILl~-~~--~vkl~DFG~a~~------------~~~~~a~e~l~  252 (282)
T 1zar_A          212 RGIVHGDLSQYNVLVS-EE--GIWIIDFPQSVE------------VGEEGWREILE  252 (282)
T ss_dssp             TTEECSCCSTTSEEEE-TT--EEEECCCTTCEE------------TTSTTHHHHHH
T ss_pred             CCCEeCCCCHHHEEEE-CC--cEEEEECCCCeE------------CCCCCHHHHHH
Confidence            4899999999999998 55  799999999862            34578999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.40  E-value=1.7e-07  Score=73.19  Aligned_cols=29  Identities=21%  Similarity=0.337  Sum_probs=25.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .|||||||||+|||++.    .++|+|||+|..
T Consensus       190 ~givHrDlkp~NILl~~----~~~liDFG~a~~  218 (258)
T 1zth_A          190 AELVHADLSEYNIMYID----KVYFIDMGQAVT  218 (258)
T ss_dssp             SCEECSSCSTTSEEESS----SEEECCCTTCEE
T ss_pred             CCEEeCCCCHHHEEEcC----cEEEEECccccc
Confidence            48999999999999976    599999999864

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.58  E-value=2.6e-05  Score=64.24  Aligned_cols=32  Identities=22%  Similarity=0.178  Sum_probs=25.3

Q ss_pred             CceEecCCCCCcEEEcCCCCC--------CEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAP--------RLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~--------~vkl~Dfg~a~   32 (225)
                      .|||||||||.|||++.++.+        .+.|+||+-+.
T Consensus       224 ~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          224 HGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             TTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             CCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            489999999999999765521        27899998654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.17  E-value=4.3e-05  Score=60.72  Aligned_cols=80  Identities=23%  Similarity=0.294  Sum_probs=46.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCC---CccccccC--CccCCC-----------cc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAY---IAPEVLSR--KEYDGK-----------IA   65 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y---~aPE~l~~--~~~~~~-----------~~   65 (225)
                      .++|+|++|.||+++.+....+.|+||+.+.......   .......+   ..|+....  ..|...           ..
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~---Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~  268 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN---DFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKE  268 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH---HHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH---HHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence            5899999999999986412257899999876421100   00000000   12221100  001101           15


Q ss_pred             cHHHHHHHHHHHHhCCCCC
Q 027327           66 DVWSCGVTLYVMLVGAYPF   84 (225)
Q Consensus        66 DiwslG~il~~ll~g~~pf   84 (225)
                      +.|+++.++|.+.+|..+|
T Consensus       269 ~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          269 KYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHcCCHHH
Confidence            7899999999999998766

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.89  E-value=0.00031  Score=53.91  Aligned_cols=29  Identities=21%  Similarity=0.270  Sum_probs=23.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|++|.||+++.+.  .++|+||+.+.
T Consensus       185 ~l~HgDl~~~Nil~~~~~--~~~liD~~~a~  213 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGR--FSGFIDCGRLG  213 (264)
T ss_dssp             EEECSSCCGGGEEEETTE--EEEECCCTTCE
T ss_pred             EEECCCCCCCcEEEECCc--EEEEEcchhcc
Confidence            489999999999997543  45699999764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.41  E-value=0.0015  Score=52.98  Aligned_cols=32  Identities=25%  Similarity=0.443  Sum_probs=26.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      +++|+|++|.|||++.++...+.|+||+.+..
T Consensus       217 ~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          217 SIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             EEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             eEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            58999999999999865432368999998763

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.38  E-value=0.0015  Score=50.32  Aligned_cols=29  Identities=28%  Similarity=0.311  Sum_probs=23.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|++|.|||++.+.  .+.|+||+.+.
T Consensus       184 ~l~HgDl~~~Nil~~~~~--~~~lIDwe~a~  212 (263)
T 3tm0_A          184 VFSHGDLGDSNIFVKDGK--VSGFIDLGRSG  212 (263)
T ss_dssp             EEECSSCCTTSEEEETTE--EEEECCCTTCE
T ss_pred             eEECCCCCcCcEEEECCc--EEEEEEchhcc
Confidence            489999999999997543  45799998754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.67  E-value=0.0059  Score=48.70  Aligned_cols=29  Identities=28%  Similarity=0.535  Sum_probs=24.5

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+++.|||++.++  .+.|+||+.+.
T Consensus       223 ~l~HgD~~~~Nil~~~~~--~~~lIDfe~a~  251 (346)
T 2q83_A          223 NLCHQDYGTGNTLLGENE--QIWVIDLDTVS  251 (346)
T ss_dssp             CEECSSCSTTSEEECGGG--CEEECCCTTCE
T ss_pred             ceecCCCCcccEEEeCCC--cEEEEehhhcc
Confidence            689999999999996554  58999998753

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.21  E-value=0.0093  Score=49.43  Aligned_cols=29  Identities=17%  Similarity=0.268  Sum_probs=24.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~   33 (225)
                      .++|+|++|.|||++.++   ++++||+.+..
T Consensus       233 ~liHGDl~~~Nil~~~~~---~~lID~e~a~~  261 (420)
T 2pyw_A          233 ALIHGDLHTGSVMVTQDS---TQVIDPEFSFY  261 (420)
T ss_dssp             EEECSCCSGGGEEECSSC---EEECCCTTCEE
T ss_pred             eEEecCCCCCcEEEeCCC---CEEEeCccccc
Confidence            589999999999997654   89999998763

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.85  E-value=0.0098  Score=47.17  Aligned_cols=29  Identities=24%  Similarity=0.374  Sum_probs=23.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+++.|||++.+.  .+.|+||+.+.
T Consensus       188 ~liHgDl~~~Nil~~~~~--~~~lIDf~~a~  216 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDE--LSGLIDFYFAC  216 (322)
T ss_dssp             EEECSCCCGGGEEEETTE--EEEECCCTTCE
T ss_pred             ccCCCCCCccCEEEeCCc--eEEEecchhcc
Confidence            689999999999997653  35799998764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.78  E-value=0.015  Score=44.79  Aligned_cols=29  Identities=28%  Similarity=0.452  Sum_probs=23.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+++.|||++..+  .+-|+||+.+.
T Consensus       194 ~l~HGDl~~~Nil~~~~~--~~~viDwe~a~  222 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGK--LIGCIDVGRVG  222 (272)
T ss_dssp             EEECSCCCTTSEEEETTE--EEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEECCe--EEEEEECcccc
Confidence            379999999999998654  45699998764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=94.24  E-value=0.021  Score=45.15  Aligned_cols=31  Identities=26%  Similarity=0.326  Sum_probs=24.4

Q ss_pred             ceEecCCCCCcEEEcC---CCCCCEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDG---SKAPRLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~---~~~~~vkl~Dfg~a~~   33 (225)
                      .++|+|++|.|||++.   ++. .+.|+||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~-~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTP-LTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCC-EEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCc-eEEEEehhhcCC
Confidence            5799999999999986   231 358999998753

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=94.11  E-value=0.023  Score=45.36  Aligned_cols=32  Identities=28%  Similarity=0.394  Sum_probs=25.4

Q ss_pred             ceEecCCCCCcEEEcCCC--CCCEEEecCCCccC
Q 027327            2 QICHRDLKLENTLLDGSK--APRLKICDFGYSKS   33 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~--~~~vkl~Dfg~a~~   33 (225)
                      .++|||+.+.||+++.+.  ...+.|+||+.+..
T Consensus       184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            589999999999997531  12689999998763

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=93.70  E-value=0.031  Score=45.30  Aligned_cols=28  Identities=36%  Similarity=0.656  Sum_probs=23.3

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+++.|||++.+   .+.|+||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~---~~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNK---CLRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC----CEEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCC---cEEEEEecCCC
Confidence            58999999999999744   38999998765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.69  E-value=0.017  Score=46.49  Aligned_cols=29  Identities=14%  Similarity=0.226  Sum_probs=23.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|++|.|||++...  .+.|+||+.+.
T Consensus       223 ~l~HgDl~~~Nil~~~~~--~~~vIDwe~a~  251 (357)
T 3ats_A          223 VLLWGDARVGNVLYRDFQ--PVAVLDWEMVA  251 (357)
T ss_dssp             EEECSSCSGGGEEEETTE--EEEECCGGGCE
T ss_pred             eEEeCCCCCCeEEEeCCc--EEEEEcccccc
Confidence            589999999999998422  46899998764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=93.58  E-value=0.034  Score=45.51  Aligned_cols=28  Identities=18%  Similarity=0.261  Sum_probs=23.6

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|++|.||+++.+   .++++||..+.
T Consensus       228 ~L~HGDl~~~Nil~~~~---~~~lID~e~a~  255 (397)
T 2olc_A          228 TLIHGDLHTGSIFASEH---ETKVIDPEFAF  255 (397)
T ss_dssp             EEECSCCSGGGEEECSS---CEEECCCTTCE
T ss_pred             ceeeCCCCcCcEEEeCC---CeEEEeCcccc
Confidence            57999999999999754   38999997664

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.01  E-value=0.042  Score=43.57  Aligned_cols=27  Identities=19%  Similarity=0.151  Sum_probs=23.2

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+++.|||++ +   .+.|+||+.+.
T Consensus       196 ~l~HgD~~~~Nil~~-~---~~~lIDfe~a~  222 (328)
T 1zyl_A          196 LRLHGDCHAGNILWR-D---GPMFVDLDDAR  222 (328)
T ss_dssp             EECCSSCSGGGEEES-S---SEEECCCTTCC
T ss_pred             eeeeCCCCcccEeEc-C---CCEEEECCCCC
Confidence            579999999999997 3   48999998764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=92.40  E-value=0.23  Score=37.33  Aligned_cols=55  Identities=13%  Similarity=0.016  Sum_probs=32.3

Q ss_pred             CCCccccccCCccCCCcccHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhccc
Q 027327           48 AYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVA  127 (225)
Q Consensus        48 ~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  127 (225)
                      .+.|||... .. .+.+.-|||||+++|..+--..|=                       .....+|+.+..||..|..-
T Consensus       102 ~~~~pe~~~-~~-~te~~~IysLG~tLY~ALDygL~e-----------------------~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A          102 PPVAGKLGY-SQ-CMETEVIESLGIIIYKALDYGLKE-----------------------NEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             -----CCSS-SS-SCHHHHHHHHHHHHHHHHTTTCCT-----------------------TEEECCCHHHHHHHHHHTTC
T ss_pred             CCCChhhcc-cc-chHHHHHHHHHHHHHHHhhcCCCc-----------------------ccchhhCHHHHHHHHHHHhc
Confidence            466888763 11 223367999999999887322211                       11124788999999998765

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=92.26  E-value=0.056  Score=43.39  Aligned_cols=29  Identities=24%  Similarity=0.510  Sum_probs=24.8

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      +++|+|+.+.||+++.++  .+.|+||+.+.
T Consensus       207 ~~~HgD~~~~N~l~~~~~--~~~~iD~e~~~  235 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEE--SIYIIDWDEPM  235 (339)
T ss_dssp             EEECSCCCGGGEEECGGG--CEEECCCSSCE
T ss_pred             eeEeCCCCcCCEEEeCCC--eEEEEECCCCe
Confidence            589999999999997554  58999998765

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=91.51  E-value=0.074  Score=44.22  Aligned_cols=17  Identities=41%  Similarity=0.704  Sum_probs=14.6

Q ss_pred             ceEecCCCCCcEEEcCC
Q 027327            2 QICHRDLKLENTLLDGS   18 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~   18 (225)
                      .++|+|+.+.|||++.+
T Consensus       250 v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEECSCCCGGGEEEEC-
T ss_pred             EEEeCCCCCCeEEeeCC
Confidence            47999999999999764

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=91.43  E-value=0.11  Score=40.72  Aligned_cols=28  Identities=39%  Similarity=0.528  Sum_probs=22.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.|.||+.. ++  .+.++||..+.
T Consensus       174 ~l~HgDl~~~Nil~~-~~--~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFLDT-GE--RMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEEEC-SS--CEEECCCTTCE
T ss_pred             eeeccCCCcCCEEEC-CC--CEEEEeccccc
Confidence            479999999999954 33  58999998765

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=90.43  E-value=0.16  Score=42.72  Aligned_cols=15  Identities=33%  Similarity=0.541  Sum_probs=13.9

Q ss_pred             ceEecCCCCCcEEEc
Q 027327            2 QICHRDLKLENTLLD   16 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~   16 (225)
                      .++|+|+.+.|||++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            479999999999997

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=90.15  E-value=0.16  Score=41.55  Aligned_cols=31  Identities=39%  Similarity=0.637  Sum_probs=24.5

Q ss_pred             ceEecCCCCCcEEEcCC--CCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGS--KAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~--~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.+.|||++.+  ....+.++||..+.
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            58999999999999765  11268999998764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=86.26  E-value=0.43  Score=39.16  Aligned_cols=30  Identities=40%  Similarity=0.635  Sum_probs=23.2

Q ss_pred             eEecCCCCCcEEEcC----CCCCCEEEecCCCcc
Q 027327            3 ICHRDLKLENTLLDG----SKAPRLKICDFGYSK   32 (225)
Q Consensus         3 ivHrdlkp~Nil~~~----~~~~~vkl~Dfg~a~   32 (225)
                      ++|+|+.+.|||+..    +....++++||-+|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            679999999999942    122269999998775

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=84.36  E-value=0.37  Score=37.35  Aligned_cols=24  Identities=25%  Similarity=0.144  Sum_probs=19.2

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDF   28 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Df   28 (225)
                      .+||+|+.+.||+++.++   ..+.|-
T Consensus       189 ~LvHGDlw~gNvl~~~~g---~~~iDp  212 (288)
T 3f7w_A          189 ARIHGDLWNGNVLWQDDG---AVVIDP  212 (288)
T ss_dssp             EEECSCCSGGGEEEETTE---EEECSC
T ss_pred             eeeecCCCCCcEEEcCCC---eEEEec
Confidence            489999999999998765   456553

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=84.04  E-value=0.5  Score=39.22  Aligned_cols=28  Identities=29%  Similarity=0.568  Sum_probs=23.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.+.||+ +..+  .+.++||..+.
T Consensus       263 ~~~H~D~~~~N~l-~~~~--~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQN--NIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-ECSS--CEEECCCTTCE
T ss_pred             eEECCCCCcccee-cCCC--cEEEEecccCC
Confidence            4799999999999 4333  69999998775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	225
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-41
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-41
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-38
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-37
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-37
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-37
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-36
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-35
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-34
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-34
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-34
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-34
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-34
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-33
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-33
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-33
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-33
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-32
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-30
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-29
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-28
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-28
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-28
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-27
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-27
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-27
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-27
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-26
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-25
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-25
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-25
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-25
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-25
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-24
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-24
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-24
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-24
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-24
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-23
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-23
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-22
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-22
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-22
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-22
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-22
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-21
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-21
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-21
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-21
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-21
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-20
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-19
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-19
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-17
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-17
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.002

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 5e-41
 Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 8/152 (5%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLSR 57
           + I HRD+K EN LLD      LKI DFG +     +++ +      GT  Y+APE+L R
Sbjct: 122 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           +E+  +  DVWSCG+ L  ML G  P++ P D                 +  + ++    
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKTYLNPWKKIDSAP 236

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
             LL +I V +P  RITIP+I+K  W+ K L 
Sbjct: 237 LALLHKILVENPSARITIPDIKKDRWYNKPLK 268

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 6e-41
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 10/147 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            ++ HRD+K EN LL  +    LKI DFG+S  +   S+  +  GT  Y+ PE++  + +
Sbjct: 125 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 181

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           D K  D+WS GV  Y  LVG  PFE       ++ T +RI  V ++ P +V  +   R L
Sbjct: 182 DEK-VDLWSLGVLCYEFLVGKPPFEA----NTYQETYKRISRVEFTFPDFV--TEGARDL 234

Query: 121 LSRIFVADPEKRITIPEIQKHPWFLKN 147
           +SR+   +P +R  + E+ +HPW   N
Sbjct: 235 ISRLLKHNPSQRPMLREVLEHPWITAN 261

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 5e-38
 Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 9/191 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I H D++ EN +    ++  +KI +FG ++        +     P Y APEV      
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECR 118
                D+WS G  +YV+L G  PF         +  I+ I++  Y+     +  +S+E  
Sbjct: 181 STA-TDMWSLGTLVYVLLSGINPFLA----ETNQQIIENIMNAEYTFDEEAFKEISIEAM 235

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGI 178
             + R+ V + + R+T  E  +HPW  +   IE +        K      +   +++  +
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQK--IERVSTKVIRTLKHRRYYHTLIKKDLNMV 293

Query: 179 IQEARKPGEGP 189
           +  AR    G 
Sbjct: 294 VSAARISCGGA 304

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 5e-37
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 1   MQICHRDLKLENTLLDGSKAP-RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + I HRD+K EN L    +    LK+ DFG++K +  H+   +   TP Y+APEVL  ++
Sbjct: 130 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 189

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLEC 117
           YD    D+WS GV +Y++L G  PF              RI    Y  P   +  VS E 
Sbjct: 190 YDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 248

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILG 177
           + L+  +   +P +R+TI E   HPW +++  +         + K D+       EE+  
Sbjct: 249 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTS 308

Query: 178 IIQEARKPGEGPKF 191
            +   R   E  K 
Sbjct: 309 ALATMRVDYEQIKI 322

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 5e-37
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)

Query: 2   QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYD 61
            I HRDLK +N  + G     +KI D G +      S  K+ +GTP ++APE+   K YD
Sbjct: 134 PIIHRDLKCDNIFITG-PTGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEEK-YD 190

Query: 62  GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLL 121
               DV++ G+ +  M    YP+ +    +N     +R+ S             E + ++
Sbjct: 191 ES-VDVYAFGMCMLEMATSEYPYSEC---QNAAQIYRRVTSGVKPASFDKVAIPEVKEII 246

Query: 122 SRIFVADPEKRITIPEIQKHPWF 144
                 + ++R +I ++  H +F
Sbjct: 247 EGCIRQNKDERYSIKDLLNHAFF 269

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  130 bits (327), Expect = 6e-37
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I H D+K EN + +  KA  +KI DFG +         K T  T  + APE++ R+  
Sbjct: 146 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 205

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECR 118
                D+W+ GV  YV+L G  PF   +D      T+Q +    +      +  VS E +
Sbjct: 206 G-FYTDMWAIGVLGYVLLSGLSPFAGEDDLE----TLQNVKRCDWEFDEDAFSSVSPEAK 260

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWF 144
             +  +   +P KR+T+ +  +HPW 
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWL 286

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  129 bits (324), Expect = 2e-36
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 8/173 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
               H DLK EN +    ++  LK+ DFG +         K T GT  + APEV   K  
Sbjct: 143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 202

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECR 118
                D+WS GV  Y++L G  PF    D      T++ + S  +++    +  +S + +
Sbjct: 203 GYY-TDMWSVGVLSYILLSGLSPFGGENDDE----TLRNVKSCDWNMDDSAFSGISEDGK 257

Query: 119 HLLSRIFVADPEKRITIPEIQKHPWFLK-NLPIEFMEEDEGSMQKGDENDQSQ 170
             + ++ +ADP  R+TI +  +HPW    N P    +       K  ++ +++
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTK 310

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  123 bits (309), Expect = 6e-35
 Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 13/151 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++     
Sbjct: 129 LNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 186

Query: 61  D-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRV 113
           D     GK  D+WS GV +Y +L G+ PF      R     ++ I+S +Y    P +   
Sbjct: 187 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH----RKQMLMLRMIMSGNYQFGSPEWDDY 242

Query: 114 SLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
           S   + L+SR  V  P+KR T  E   HP+F
Sbjct: 243 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 1e-34
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 9/144 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVG-TPAYIAPEVLSRKE 59
             + HRDLK  N  LDG     +K+ DFG ++     +        TP Y++PE ++R  
Sbjct: 133 HTVLHRDLKPANVFLDGK--QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS 190

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+ K +D+WS G  LY +     PF       + K    +I    +    Y R S E   
Sbjct: 191 YNEK-SDIWSLGCLLYELCALMPPFTA----FSQKELAGKIREGKFRRIPY-RYSDELNE 244

Query: 120 LLSRIFVADPEKRITIPEIQKHPW 143
           +++R+       R ++ EI ++P 
Sbjct: 245 IITRMLNLKDYHRPSVEEILENPL 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 3e-34
 Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 7/154 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
            Q+ HRD+K +N LL       +K+ DFG+          +ST VGTP ++APEV++RK 
Sbjct: 135 NQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y  K  D+WS G+    M+ G  P+ +    R          +    +    ++S   R 
Sbjct: 193 YGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIFRD 248

Query: 120 LLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFM 153
            L+R    D EKR +  E+ +H +     P+  +
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  122 bits (306), Expect = 3e-34
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 20/189 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL---SR 57
             + HRD+K  N LL       +K+ DFG +    + +   S VGTP ++APEV+     
Sbjct: 134 HNMIHRDVKAGNILLSEPG--LVKLGDFGSAS---IMAPANSFVGTPYWMAPEVILAMDE 188

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
            +YDGK  DVWS G+T   +     P  +     N  + +  I             S   
Sbjct: 189 GQYDGK-VDVWSLGITCIELAERKPPLFN----MNAMSALYHIAQNESPALQSGHWSEYF 243

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLP----IEFMEEDEGSMQKGDENDQSQSIE 173
           R+ +       P+ R T   + KH + L+  P    ++ ++  + ++++  +N Q + ++
Sbjct: 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRE-LDNLQYRKMK 302

Query: 174 EILGIIQEA 182
           +IL   QEA
Sbjct: 303 KIL--FQEA 309

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 5e-34
 Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 9/148 (6%)

Query: 1   MQICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
           +QI H DLK EN +L       PR+KI DFG +      ++ K+  GTP ++APE+++ +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLE 116
                 AD+WS GV  Y++L GA PF         + T+  + +V+Y      +   S  
Sbjct: 192 PLG-LEADMWSIGVITYILLSGASPFLG----DTKQETLANVSAVNYEFEDEYFSNTSAL 246

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +  + R+ V DP+KR+TI +  +HPW 
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 7e-34
 Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 14/144 (9%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             + HRD+K EN L+D ++   LK+ DFG     +  +      GT  Y  PE +    Y
Sbjct: 129 CGVLHRDIKDENILIDLNR-GELKLIDFGSGAL-LKDTVYTDFDGTRVYSPPEWIRYHRY 186

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
            G+ A VWS G+ LY M+ G  PFE  E+          I+          RVS EC+HL
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSECQHL 234

Query: 121 LSRIFVADPEKRITIPEIQKHPWF 144
           +       P  R T  EIQ HPW 
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWM 258

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 1e-33
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 18/153 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLSR 57
             I HRDLK EN LL+      ++I DFG +K     S+       VGT  Y++PE+L+ 
Sbjct: 127 KGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 184

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           K      +D+W+ G  +Y ++ G  PF       N     Q+I+ + Y  P   +   + 
Sbjct: 185 KSACKS-SDLWALGCIIYQLVAGLPPFRA----GNEYLIFQKIIKLEYDFPE--KFFPKA 237

Query: 118 RHLLSRIFVADPEKRITI------PEIQKHPWF 144
           R L+ ++ V D  KR+          ++ HP+F
Sbjct: 238 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 3e-33
 Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 42/183 (22%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDG 62
           I HRD+K  N L++      +K+CDFG S   ++ S   S VGT +Y++PE L    Y  
Sbjct: 126 IMHRDVKPSNILVNSRG--EIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSV 182

Query: 63  KIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR---------- 112
           + +D+WS G++L  M VG YP   P+          ++       P   R          
Sbjct: 183 Q-SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241

Query: 113 ----------------------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                                        SLE +  +++  + +P +R  + ++  H + 
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301

Query: 145 LKN 147
            ++
Sbjct: 302 KRS 304

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  119 bits (299), Expect = 4e-33
 Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 1   MQICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
           + I HRDLK EN L     +  ++ I DFG SK     S   +  GTP Y+APEVL++K 
Sbjct: 126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 185

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLEC 117
           Y     D WS GV  Y++L G  PF D  D +      ++IL   Y    P +  +S   
Sbjct: 186 YSKA-VDCWSIGVIAYILLCGYPPFYDENDAK----LFEQILKAEYEFDSPYWDDISDSA 240

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIE 151
           +  +  +   DPEKR T  +  +HPW   +  ++
Sbjct: 241 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 274

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (298), Expect = 4e-33
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 12/153 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
            +I HRDLK  N L        +K+ DFG S  +    Q + + +GTP ++APEV+  + 
Sbjct: 129 NKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 186

Query: 60  YDGKI----ADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY-SIPGYVRVS 114
              +     ADVWS G+TL  M     P  +     N    + +I      ++    R S
Sbjct: 187 SKDRPYDYKADVWSLGITLIEMAEIEPPHHE----LNPMRVLLKIAKSEPPTLAQPSRWS 242

Query: 115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
              +  L +    + + R T  ++ +HP+   +
Sbjct: 243 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  116 bits (291), Expect = 6e-32
 Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 16/149 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I +RDLK EN LLD  K   +KI DFG++K   +     +  GTP YIAPEV+S K Y
Sbjct: 123 KDIIYRDLKPENILLD--KNGHIKITDFGFAK--YVPDVTYTLCGTPDYIAPEVVSTKPY 178

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           +    D WS G+ +Y ML G  PF D     N   T ++IL+     P +   + + + L
Sbjct: 179 NKS-IDWWSFGILIYEMLAGYTPFYDS----NTMKTYEKILNAELRFPPF--FNEDVKDL 231

Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           LSR+   D  +R+        +++ HPWF
Sbjct: 232 LSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 8e-30
 Identities = 56/146 (38%), Positives = 82/146 (56%), Gaps = 11/146 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
             I +RDLKL+N LLD  K   +KI DFG  K ++L     +T  GTP YIAPE+L  ++
Sbjct: 122 KGIVYRDLKLDNILLD--KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK 179

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y+    D WS GV LY ML+G  PF      ++ +     I   +   P +  +  E + 
Sbjct: 180 YNHS-VDWWSFGVLLYEMLIGQSPFHG----QDEEELFHSIRMDNPFYPRW--LEKEAKD 232

Query: 120 LLSRIFVADPEKRITIP-EIQKHPWF 144
           LL ++FV +PEKR+ +  +I++HP F
Sbjct: 233 LLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  110 bits (275), Expect = 3e-29
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 11/149 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             + +RDLK  N LLD  +   ++I D G +       +P ++VGT  Y+APEVL +   
Sbjct: 126 RFVVYRDLKPANILLD--EHGHVRISDLGLACDFS-KKKPHASVGTHGYMAPEVLQKGVA 182

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
               AD +S G  L+ +L G  PF      ++     +  L++   +P     S E R L
Sbjct: 183 YDSSADWFSLGCMLFKLLRGHSPF-RQHKTKDKHEIDRMTLTMAVELPDS--FSPELRSL 239

Query: 121 LSRIFVADPEKRITIP-----EIQKHPWF 144
           L  +   D  +R+        E+++ P+F
Sbjct: 240 LEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 1e-28
 Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 8/155 (5%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
             I HRDLK  N  L       +KI DFG +          Q +   G+  ++APEV+  
Sbjct: 123 KSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180

Query: 58  KEYD--GKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
           ++ +     +DV++ G+ LY ++ G  P+ +  +       + R                
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFL-KNLP 149
             + L++       ++R   P+I      L ++LP
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 2e-28
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 15/150 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLSRKE 59
             + +RD+KLEN +LD      +KI DFG  K  +      K+  GTP Y+APEVL   +
Sbjct: 124 RDVVYRDIKLENLMLDKD--GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y     D W  GV +Y M+ G  PF +    ++ +   + IL      P    +S E + 
Sbjct: 182 YGRA-VDWWGLGVVMYEMMCGRLPFYN----QDHERLFELILMEEIRFPRT--LSPEAKS 234

Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           LL+ +   DP++R+        E+ +H +F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 2e-28
 Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 24/165 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  Y
Sbjct: 135 HRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY 192

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSV-------HYSIPGYV-- 111
                D+WS G     M      F    D       +  I            ++P     
Sbjct: 193 ATP-VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 251

Query: 112 ------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                        +    + LL +    +P KRI+      HP+F
Sbjct: 252 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 296

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (256), Expect = 4e-27
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 26/168 (15%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
            ++ HRDLK +N L++      +K+ DFG +++  +  +  +  V T  Y APE+L   +
Sbjct: 121 HRVLHRDLKPQNLLINTE--GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPED-------PRNFKTTIQRILSVHYSIPGYV- 111
           Y     D+WS G     M+     F    +        R   T  + +     S+P Y  
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238

Query: 112 ---------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                           +  + R LLS++   DP KRI+      HP+F
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (256), Expect = 5e-27
 Identities = 46/172 (26%), Positives = 64/172 (37%), Gaps = 26/172 (15%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLSRKE 59
             I HRDLK  N LLD +    LK+ DFG +KS    +      V T  Y APE+L    
Sbjct: 119 HWILHRDLKPNNLLLDEN--GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR 176

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFK-------TTIQRILSVHYSIPGYV- 111
             G   D+W+ G  L  +L+         D            T  +       S+P YV 
Sbjct: 177 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 236

Query: 112 --------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
                             +   L+  +F+ +P  RIT  +  K  +F  N P
Sbjct: 237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF-SNRP 287

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 6e-27
 Identities = 45/167 (26%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             ICHRD+K +N LLD      LK+CDFG +K  V      S + +  Y APE++     
Sbjct: 141 FGICHRDIKPQNLLLD-PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 199

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPED-----------------------PRNFKTTI 97
                DVWS G  L  +L+G   F                            P   +   
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 259

Query: 98  QRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
            +I +  ++     R   E   L SR+    P  R+T  E   H +F
Sbjct: 260 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 7e-27
 Identities = 47/214 (21%), Positives = 73/214 (34%), Gaps = 40/214 (18%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLS 56
             + HRDLK  N LL+      LKICDFG ++               V T  Y APE++ 
Sbjct: 128 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 185

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG------- 109
             +   K  D+WS G  L  ML     F      +++   +  IL +  S          
Sbjct: 186 NSKGYTKSIDIWSVGCILAEMLSNRPIFPG----KHYLDQLNHILGILGSPSQEDLNCII 241

Query: 110 ----------------------YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN 147
                                 +     +   LL ++   +P KRI + +   HP+  + 
Sbjct: 242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL-EQ 300

Query: 148 LPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE 181
                 E    +  K D        E++  +I E
Sbjct: 301 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFE 334

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 4e-26
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 11/153 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLSRK 58
           M   HRDL+  N L+  +     K+ DFG ++      ++  +       + APE     
Sbjct: 132 MNYVHRDLRAANILVGENL--VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 189

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            +  K +DVWS G+ L  +             R     ++R     Y +P          
Sbjct: 190 RFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER----GYRMPCPPECPESLH 244

Query: 119 HLLSRIFVADPEKRITIPEIQK--HPWFLKNLP 149
            L+ + +  +PE+R T   +Q     +F    P
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 277

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.2 bits (246), Expect = 2e-25
 Identities = 36/187 (19%), Positives = 64/187 (34%), Gaps = 42/187 (22%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL 55
            +I HRD+K  N L+       LK+ DFG ++      +   ++  + V T  Y  PE+L
Sbjct: 136 NKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELL 193

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR--- 112
             +   G   D+W  G  +  M   +   +        +  +  I  +  SI   V    
Sbjct: 194 LGERDYGPPIDLWGAGCIMAEMWTRSPIMQG----NTEQHQLALISQLCGSITPEVWPNV 249

Query: 113 ---------------------------VSLECRHLLSRIFVADPEKRITIPEIQKHPWFL 145
                                             L+ ++ V DP +RI   +   H +F 
Sbjct: 250 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 309

Query: 146 KN-LPIE 151
            + +P +
Sbjct: 310 SDPMPSD 316

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.1 bits (246), Expect = 3e-25
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + + +RDLK EN L+D      +++ DFG++K      +  +  GTP  +APE++  K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV--KGRTWTLCGTPEALAPEIILSKGY 215

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
           +    D W+ GV +Y M  G  PF             ++I+S     P +   S + + L
Sbjct: 216 NKA-VDWWALGVLIYEMAAGYPPFFA----DQPIQIYEKIVSGKVRFPSH--FSSDLKDL 268

Query: 121 LSRIFVADPEKRI-----TIPEIQKHPWF 144
           L  +   D  KR       + +I+ H WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 98.4 bits (244), Expect = 4e-25
 Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 33/176 (18%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           M I HRD+K  N ++D  +  +L++ D+G ++      +    V +  +  PE+L   + 
Sbjct: 148 MGIMHRDVKPHNVMID-HEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 206

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHY--------------- 105
                D+WS G  L  M+    PF    D  +    I ++L                   
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266

Query: 106 -----------------SIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                                   VS E    L ++   D + R+T  E  +HP+F
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.3 bits (241), Expect = 5e-25
 Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 27/174 (15%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLSRKE 59
             + HRDLK +N L++ +    LK+ +FG +++  +  +  S  V T  Y  P+VL   +
Sbjct: 120 RNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRIL------------------ 101
                 D+WS G     +     P     D  +    I R+L                  
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237

Query: 102 ------SVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
                 +    +    +++   R LL  +   +P +RI+  E  +HP+F    P
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 7e-25
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 8/150 (5%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           + I +RD+KLEN LLD +    L          +    +     GT  Y+AP+++   + 
Sbjct: 148 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS 207

Query: 61  -DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
              K  D WS GV +Y +L GA PF    +  +     +RIL      P    +S   + 
Sbjct: 208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ--EMSALAKD 265

Query: 120 LLSRIFVADPEKRI-----TIPEIQKHPWF 144
           L+ R+ + DP+KR+        EI++H +F
Sbjct: 266 LIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 2e-24
 Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
            ++ HRDL   N L+   +   +KI DFG +K   +       +       ++A E +  
Sbjct: 130 RRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           + Y  + +DVWS GVT++ ++       D          I  IL     +P     +++ 
Sbjct: 188 RIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASE----ISSILEKGERLPQPPICTIDV 242

Query: 118 RHLLSRIFVADPEKRITIPEIQKHPWFLKNLP 149
             ++ + ++ D + R    E+      +   P
Sbjct: 243 YMIMVKCWMIDADSRPKFRELIIEFSKMARDP 274

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.3 bits (236), Expect = 5e-24
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 7/141 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
            Q  HRDL   N L+  +     KI DFG S+   ++ +         ++A E L+   Y
Sbjct: 146 KQFIHRDLAARNILVGEN--YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
               +DVWS GV L+ ++        P          +++    Y +   +    E   L
Sbjct: 204 TTN-SDVWSYGVLLWEIVSLGGT---PYCGMTCAELYEKLPQ-GYRLEKPLNCDDEVYDL 258

Query: 121 LSRIFVADPEKRITIPEIQKH 141
           + + +   P +R +  +I   
Sbjct: 259 MRQCWREKPYERPSFAQILVS 279

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 94.0 bits (233), Expect = 7e-24
 Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 9/147 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFG--YSKSSVLHSQPKSTVGTPAYIAPEVLSRK 58
             I HRD+K  N ++  + A ++         + S    +Q  + +GT  Y++PE     
Sbjct: 130 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 189

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVR--VSLE 116
             D + +DV+S G  LY +L G  PF              + +      P      +S +
Sbjct: 190 SVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVS----VAYQHVREDPIPPSARHEGLSAD 244

Query: 117 CRHLLSRIFVADPEKRITIPEIQKHPW 143
              ++ +    +PE R       +   
Sbjct: 245 LDAVVLKALAKNPENRYQTAAEMRADL 271

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.5 bits (232), Expect = 7e-24
 Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 9/141 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
               HRDL   N L+        K+ DFG +K     S   +      + APE L  K++
Sbjct: 122 NNFVHRDLAARNVLVSEDN--VAKVSDFGLTKE--ASSTQDTGKLPVKWTAPEALREKKF 177

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHL 120
             K +DVWS G+ L+ +         P      K  + R+    Y +            +
Sbjct: 178 STK-SDVWSFGILLWEIYSFGRV---PYPRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEV 232

Query: 121 LSRIFVADPEKRITIPEIQKH 141
           +   +  D   R +  ++++ 
Sbjct: 233 MKNCWHLDAAMRPSFLQLREQ 253

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 94.2 bits (233), Expect = 8e-24
 Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 26/168 (15%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLSRKE 59
            ++ HRDLK +N L++      LKI DFG +++  +  +  +  + T  Y AP+VL   +
Sbjct: 119 RRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV-------- 111
                 D+WS G     M+ G   F    +        + + + +      V        
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236

Query: 112 ---------------RVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                           +      LLS++   DP +RIT  +  +H +F
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.7 bits (232), Expect = 3e-23
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 35/208 (16%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I HRDLK  N  ++      LKI DFG ++     S+    V T  Y APEV+     
Sbjct: 140 AGIIHRDLKPGNLAVNED--CELKILDFGLARQ--ADSEMTGYVVTRWYRAPEVILNWMR 195

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPED--------------PRNFKTTIQRILSVHY- 105
             +  D+WS G  +  M+ G   F+  +               P  F   +Q   + +Y 
Sbjct: 196 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM 255

Query: 106 -SIPGYVR---------VSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEE 155
             +P   +          S    +LL ++ V D E+R+T  E   HP+F ++L      E
Sbjct: 256 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF-ESLHD---TE 311

Query: 156 DEGSMQKGDEN--DQSQSIEEILGIIQE 181
           DE  +QK D++  D  ++++E   +  +
Sbjct: 312 DEPQVQKYDDSFDDVDRTLDEWKRVTYK 339

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 6e-23
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 11/143 (7%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSRKE 59
             HRDL   N L+   K   +KICDFG ++   S   +    +      ++APE L    
Sbjct: 185 CVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 242

Query: 60  YDGKIADVWSCGVTLYVML-VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
           Y  K +DVWS G+ L+ +  +G  P+              +++   + +      + E  
Sbjct: 243 YTIK-SDVWSYGILLWEIFSLGVNPYPG----IPVDANFYKLIQNGFKMDQPFYATEEIY 297

Query: 119 HLLSRIFVADPEKRITIPEIQKH 141
            ++   +  D  KR + P +   
Sbjct: 298 IIMQSCWAFDSRKRPSFPNLTSF 320

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.4 bits (226), Expect = 1e-22
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL 55
            +  HRDL   N +LD      +K+ DFG ++                     ++A E L
Sbjct: 149 KKFVHRDLAARNCMLDEK--FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206

Query: 56  SRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
             +++  K +DVWS GV L+ ++    P     +  +    + +       +        
Sbjct: 207 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ----GRRLLQPEYCPD 261

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPIEFMEED 156
               ++ + +    E R +  E+      +  +   F+ E 
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVSR---ISAIFSTFIGEH 299

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 91.6 bits (226), Expect = 2e-22
 Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 45/193 (23%)

Query: 3   ICHRDLKLENTLLD--GSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
           I H D+K EN L++   S    ++I       +        +++ T  Y +PEVL    +
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKT--TIQRILSVHYSIPGYV------- 111
               AD+WS    ++ ++ G + FE  E     K    I +I+ +   +P Y+       
Sbjct: 207 GCG-ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT 265

Query: 112 ---------------------------------RVSLECRHLLSRIFVADPEKRITIPEI 138
                                              + E    LS +   DP KR     +
Sbjct: 266 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325

Query: 139 QKHPWFLKNLPIE 151
             HPW    L +E
Sbjct: 326 VNHPWLKDTLGME 338

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.2 bits (223), Expect = 3e-22
 Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 22/160 (13%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEV 54
           M   HRDL   N L++ +     K+ DFG S+      S   ++          + APE 
Sbjct: 147 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 204

Query: 55  LSRKEYDGKIADVWSCGVTLYVML-VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRV 113
           +  +++    +DVWS G+ ++ ++  G  P+ D       +  I  I    Y +P  +  
Sbjct: 205 IQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWD----MTNQDVINAIEQ-DYRLPPPMDC 258

Query: 114 SLECRHLLSRIFVADPEKRITIPEI-------QKHPWFLK 146
                 L+   +  D   R    +I        ++P  LK
Sbjct: 259 PSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 298

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.3 bits (223), Expect = 4e-22
 Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 37/208 (17%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I HRDLK  N  ++  +   LKI DFG ++      +    V T  Y APE++    +
Sbjct: 140 ADIIHRDLKPSNLAVN--EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 195

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFED--------------------------PEDPRNFK 94
             +  D+WS G  +  +L G   F                             E  RN+ 
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255

Query: 95  TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK-----NLP 149
            ++ ++  ++++   ++  +     LL ++ V D +KRIT  +   H +F +     + P
Sbjct: 256 QSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP 314

Query: 150 I-EFMEEDEGSMQKGDENDQSQSIEEIL 176
           + +  ++   S     +  +S + +E++
Sbjct: 315 VADPYDQSFESRDLLIDEWKSLTYDEVI 342

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 5e-22
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 12/146 (8%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLS 56
            +  HRDL   N LL       +KI DFG  +    +   +   +      A+ APE L 
Sbjct: 130 KRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187

Query: 57  RKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
            + +    +D W  GVTL+ M   G  P+       N    + +I      +P       
Sbjct: 188 TRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG----LNGSQILHKIDKEGERLPRPEDCPQ 242

Query: 116 ECRHLLSRIFVADPEKRITIPEIQKH 141
           +  +++ + +   PE R T   ++  
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 8e-22
 Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 18/153 (11%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLS 56
               HRDL   N LL        KI DFG SK        ++   +      + APE ++
Sbjct: 128 KNFVHRDLAARNVLLVNR--HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 185

Query: 57  RKEYDGKIADVWSCGVTLYVML-VGAYPFEDPEDPRNFKTTIQRILSVHY-SIPGYVRVS 114
            +++  + +DVWS GVT++  L  G  P++           +  I        P      
Sbjct: 186 FRKFSSR-SDVWSYGVTMWEALSYGQKPYKK----MKGPEVMAFIEQGKRMECPPE--CP 238

Query: 115 LECRHLLSRIFVADPEKRITIPEIQ---KHPWF 144
            E   L+S  ++   E R     ++   +  ++
Sbjct: 239 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 9e-22
 Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 16/152 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKS----SVLHSQPKSTVGTPAYIAPEVLS 56
               HRDL   N LL        KI DFG SK+       +           + APE ++
Sbjct: 126 SNFVHRDLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183

Query: 57  RKEYDGKIADVWSCGVTLYVML-VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSL 115
             ++  K +DVWS GV ++     G  P+               +      +        
Sbjct: 184 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG----MKGSEVTAMLEK-GERMGCPAGCPR 237

Query: 116 ECRHLLSRIFVADPEKRITIPEIQ---KHPWF 144
           E   L++  +  D E R     ++   ++ ++
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.8 bits (219), Expect = 1e-21
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 10/143 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
            +  HRDL   N L+  +    +KI DFG S+   S+  +    +      ++ PE +  
Sbjct: 159 RKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY 216

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
             Y  + +DVW+ GV L+ +         P      +  I  +   +  +       LE 
Sbjct: 217 NRYTTE-SDVWAYGVVLWEIFSYGLQ---PYYGMAHEEVIYYVRDGNI-LACPENCPLEL 271

Query: 118 RHLLSRIFVADPEKRITIPEIQK 140
            +L+   +   P  R +   I +
Sbjct: 272 YNLMRLCWSKLPADRPSFCSIHR 294

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 1e-21
 Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 9/143 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLSRK 58
             + HRDL   N L+  ++   +K+ DFG ++      ++    T     + +PEV S  
Sbjct: 120 ACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            Y  K +DVWS GV ++ +         P + R+    ++ I +  + +      S    
Sbjct: 178 RYSSK-SDVWSFGVLMWEVFSEGKI---PYENRSNSEVVEDIST-GFRLYKPRLASTHVY 232

Query: 119 HLLSRIFVADPEKRITIPEIQKH 141
            +++  +   PE R     + + 
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLRQ 255

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.5 bits (216), Expect = 2e-21
 Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 9/143 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
            +  HRD+   N L+  +    +K+ DFG S+     +  K++       ++APE ++ +
Sbjct: 127 KRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            +    +DVW  GV ++ +L+       P         I RI +    +P          
Sbjct: 185 RFTSA-SDVWMFGVCMWEILMHGVK---PFQGVKNNDVIGRIENGER-LPMPPNCPPTLY 239

Query: 119 HLLSRIFVADPEKRITIPEIQKH 141
            L+++ +  DP +R    E++  
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQ 262

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 2e-21
 Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 11/142 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLS 56
           M   HRDL   N L++ +     K+ DFG S+                    + APE +S
Sbjct: 129 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 186

Query: 57  RKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLE 116
            +++    +DVWS G+ ++ ++                  + + ++  + +P  +     
Sbjct: 187 YRKFTSA-SDVWSFGIVMWEVMTYGERPYWELSNHE----VMKAINDGFRLPTPMDCPSA 241

Query: 117 CRHLLSRIFVADPEKRITIPEI 138
              L+ + +  +  +R    +I
Sbjct: 242 IYQLMMQCWQQERARRPKFADI 263

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.5 bits (216), Expect = 3e-21
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 9/142 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLSRK 58
               HRDL   N L+  +    +K+ DFG S+  +   ++          + APE L+  
Sbjct: 134 KNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
           ++  K +DVW+ GV L+ +           D       +  +L   Y +        +  
Sbjct: 192 KFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYELLEKDYRMERPEGCPEKVY 246

Query: 119 HLLSRIFVADPEKRITIPEIQK 140
            L+   +  +P  R +  EI +
Sbjct: 247 ELMRACWQWNPSDRPSFAEIHQ 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.2 bits (215), Expect = 3e-21
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 17/167 (10%)

Query: 1   MQICHRDLKLENTLL-DGSKAPRLKICDFGYSK--------SSVLHSQPKSTVGTPAYIA 51
               HRD+K +N L+  G K   + I DFG +K          + + + K+  GT  Y +
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 52  PEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYV 111
                  E   +  D+ S G  L    +G+ P+         +   +RI     S P  V
Sbjct: 182 INTHLGIEQSRR-DDLESLGYVLMYFNLGSLPW-QGLKAATKRQKYERISEKKMSTPIEV 239

Query: 112 ---RVSLECRHLLSRIFVADPEKRITIPEIQ---KHPWFLKNLPIEF 152
                  E    L+       + +     ++   ++ +  +    ++
Sbjct: 240 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 286

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 87.2 bits (215), Expect = 3e-21
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 16/154 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPR---LKICDFGYSK--------SSVLHSQPKSTVGTPAY 49
             + +RD+K +N L+    +     + + DFG  K          + + + K+  GT  Y
Sbjct: 120 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARY 179

Query: 50  IAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPG 109
           ++      +E   +  D+ + G      L G+ P+         K   +RI     S P 
Sbjct: 180 MSINTHLGREQSRR-DDLEALGHVFMYFLRGSLPW-QGLKAATNKQKYERIGEKKQSTPL 237

Query: 110 YVR---VSLECRHLLSRIFVADPEKRITIPEIQK 140
                    E    +        +       +Q 
Sbjct: 238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 5e-21
 Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 11/144 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
            Q  HRDL   N L++      +K+ DFG S+  +      S        +  PEVL   
Sbjct: 119 KQFLHRDLAARNCLVNDQ--GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176

Query: 59  EYDGKIADVWSCGVTLYVML-VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           ++  K +D+W+ GV ++ +  +G  P+E          T + I      +      S + 
Sbjct: 177 KFSSK-SDIWAFGVLMWEIYSLGKMPYER----FTNSETAEHIAQ-GLRLYRPHLASEKV 230

Query: 118 RHLLSRIFVADPEKRITIPEIQKH 141
             ++   +    ++R T   +  +
Sbjct: 231 YTIMYSCWHEKADERPTFKILLSN 254

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 6e-20
 Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 11/148 (7%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRK 58
               HRDL+  N L+        KI DFG ++    +             + APE ++  
Sbjct: 128 RNYIHRDLRAANILVS--DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 185

Query: 59  EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECR 118
            +  K +DVWS G+ L  ++                  ++R     Y +        E  
Sbjct: 186 TFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELY 240

Query: 119 HLLSRIFVADPEKRITIPEIQK--HPWF 144
            L+   +   PE R T   ++     +F
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDFF 268

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 1e-19
 Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 9/144 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
            +  HRDL   N LL       +KICDFG ++       + +         ++APE +  
Sbjct: 153 RKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 210

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
           + Y  + +DVWS GV L+ +         P           R L     +      + E 
Sbjct: 211 RVYTIQ-SDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 266

Query: 118 RHLLSRIFVADPEKRITIPEIQKH 141
              +   +  +P +R T  E+ +H
Sbjct: 267 YQTMLDCWHGEPSQRPTFSELVEH 290

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (204), Expect = 2e-19
 Identities = 48/217 (22%), Positives = 81/217 (37%), Gaps = 39/217 (17%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEY 60
             I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    Y
Sbjct: 138 AGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195

Query: 61  DGKIADVWSCGVTLYVMLVGAYPFED------------------PEDPRNFKTTIQRILS 102
              + D+WS G  +  M+     F                    PE  +  + T++  + 
Sbjct: 196 KENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254

Query: 103 VHYSIPGY------------------VRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF 144
                 G                      + + R LLS++ V DP KRI++ +  +HP+ 
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314

Query: 145 LKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE 181
                   +E     +     +++  +IEE   +I +
Sbjct: 315 NVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYK 351

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.7 bits (198), Expect = 9e-19
 Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 17/165 (10%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLSR 57
            +  HRDL   N ++       +KI DFG ++    +  + +    +    +++PE L  
Sbjct: 152 NKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD 209

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
             +     DVWS GV L+ +   A     P    + +  ++ ++     +          
Sbjct: 210 GVFTTYS-DVWSFGVVLWEIATLAEQ---PYQGLSNEQVLRFVMEGGL-LDKPDNCPDML 264

Query: 118 RHLLSRIFVADPEKRITIPEI------QKHPWFLKNLPIEFMEED 156
             L+   +  +P+ R +  EI      +  P F + +   + EE+
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF-REVSFYYSEEN 308

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 1e-17
 Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 28/164 (17%)

Query: 3   ICHRDLKLENTLLDGSKAPRLKICDFG-----YSKSSVLHSQPKSTVGTPAYIAPEVLSR 57
           I HRDLK +N L+  +      I D G      S +  +   P   VGT  Y+APEVL  
Sbjct: 129 IAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186

Query: 58  KEYDGKI-----ADVWSCGVTLYVMLVGAYPFEDPEDPR-----------NFKTTIQRIL 101
                       AD+++ G+  + +          ED +           + +   + + 
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246

Query: 102 S--VHYSIPGYVR---VSLECRHLLSRIFVADPEKRITIPEIQK 140
              +  +IP   +          ++   + A+   R+T   I+K
Sbjct: 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 2e-17
 Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 6/142 (4%)

Query: 1   MQICHRDLKLENTLLDGSKAPRL-KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKE 59
            +  HRDL   N L+      ++              + +  +      ++APE L  + 
Sbjct: 154 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 213

Query: 60  YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRH 119
           Y  + +DVWS GV L+ +                   + ++L   + +      + E   
Sbjct: 214 YTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHRMDKPSNCTNELYM 268

Query: 120 LLSRIFVADPEKRITIPEIQKH 141
           ++   + A P +R T  ++ + 
Sbjct: 269 MMRDCWHAVPSQRPTFKQLVED 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (184), Expect = 8e-17
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 9/141 (6%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLSR 57
               HRDL   N LL   +    KICDFG ++     S             ++APE +  
Sbjct: 164 KNCIHRDLAARNILLTHGR--ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 221

Query: 58  KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLEC 117
             Y  + +DVWS G+ L+ +              +      +++   + +        E 
Sbjct: 222 CVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRMLSPEHAPAEM 277

Query: 118 RHLLSRIFVADPEKRITIPEI 138
             ++   + ADP KR T  +I
Sbjct: 278 YDIMKTCWDADPLKRPTFKQI 298

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 16/74 (21%)

Query: 1   MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLS---- 56
             I H DL   N L+       + I DF     SV   +          +  +V +    
Sbjct: 122 RGIVHGDLSQYNVLVSE---EGIWIIDFP---QSVEVGEEGW----REILERDVRNIITY 171

Query: 57  -RKEYDGKIADVWS 69
             + Y     D+ S
Sbjct: 172 FSRTY-RTEKDINS 184

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	225
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.98
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.98
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.98
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.96
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.93
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.06
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.64
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.35
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.66
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	93.22
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	82.13

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-39  Score=257.16  Aligned_cols=144  Identities=37%  Similarity=0.648  Sum_probs=115.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  .+||+|||+|+.....   ......+||+.|+|||++.+..+.+.++|||||||++|+|
T Consensus       122 ~~IiHrDiKp~NILl~~~~--~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyem  199 (271)
T d1nvra_         122 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM  199 (271)
T ss_dssp             TTEECSCCCGGGEEECTTC--CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHH
T ss_pred             cCCccCcccHHHEEECCCC--CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHH
Confidence            5899999999999998776  7999999999865322   2234567999999999998888766669999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ++|+.||...........   .........+....+++++++||.+||+.||.+|||++|+++||||++..+
T Consensus       200 l~G~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l~  268 (271)
T d1nvra_         200 LAGELPWDQPSDSCQEYS---DWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  268 (271)
T ss_dssp             HHSSCSCSSSSTTSHHHH---HHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HhCCCCCCCCChHHHHHH---HHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCCC
Confidence            999999976554332222   222223333444568999999999999999999999999999999986543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-38  Score=252.47  Aligned_cols=143  Identities=30%  Similarity=0.481  Sum_probs=115.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+|+...... .....+||+.|+|||++.+..|+.+ +|||||||++|+|++
T Consensus       135 ~~iiHrDiKp~NILl~~~~--~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~-~DiwSlGvilyemlt  211 (293)
T d1yhwa1         135 NQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMIE  211 (293)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTH-HHHHHHHHHHHHHHH
T ss_pred             CCCcccCCcHHHeEECCCC--cEeeccchhheeeccccccccccccCCCccChhhhcCCCCCch-hceehHhHHHHHHhh
Confidence            5899999999999998776  79999999998654333 3345579999999999998888654 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+.||.+......+....   .......+.+..+++++++||.+||.+||.+|||+.|+|+||||+...+
T Consensus       212 G~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~~  278 (293)
T d1yhwa1         212 GEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (293)
T ss_dssp             SSCTTTTSCHHHHHHHHH---HHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCCCCCCCCHHHHHHHHH---hCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCCC
Confidence            999998765443333222   2222333344568999999999999999999999999999999975443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=250.40  Aligned_cols=136  Identities=38%  Similarity=0.652  Sum_probs=113.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  .+||+|||+|+.... .......||+.|+|||++.+..|+.+ +|||||||++|+|++|
T Consensus       125 ~~ivHrDiKp~Nill~~~~--~~kl~DFG~a~~~~~-~~~~~~~Gt~~Y~APE~~~~~~~~~~-~DiwSlGvilyell~G  200 (263)
T d2j4za1         125 KRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVG  200 (263)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEECCCCSCSCCCC-CCCEETTEEGGGCCHHHHTTCCCCTT-HHHHHHHHHHHHHHHS
T ss_pred             CCeeeeeeccccceecCCC--CEeecccceeeecCC-CcccccCCCCcccCHHHHcCCCCCch-hhhhhHhHHHHHHhcC
Confidence            5899999999999998776  799999999976543 23345679999999999998888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      +.||.+.+..    .....+....+..|.  .+++++++||.+||++||.+|||+.|+|+||||..
T Consensus       201 ~~Pf~~~~~~----~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         201 KPPFEANTYQ----ETYKRISRVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             SCTTCCSSHH----HHHHHHHTTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             CCCCCCCCHH----HHHHHHHcCCCCCCc--cCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            9999875443    344445555555443  58999999999999999999999999999999964

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.3e-38  Score=251.05  Aligned_cols=142  Identities=37%  Similarity=0.653  Sum_probs=102.1

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||+... ..+.+||+|||+|+.........+.+||+.|+|||++.+..|+.+ +|||||||++|+|++
T Consensus       126 ~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~-~DiwSlGvilyell~  204 (307)
T d1a06a_         126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLC  204 (307)
T ss_dssp             TTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCCCTH-HHHHHHHHHHHHHHH
T ss_pred             ceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcH-HHhhhhhHHHHHHHh
Confidence            589999999999999642 223799999999987665555566789999999999998888655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccccc--CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYS--IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+.||.+....    .....+......  .+....+|+++++||.+||.+||.+|||+.|+++||||.+.
T Consensus       205 g~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         205 GYPPFYDENDA----KLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             SSCSCCCSSHH----HHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             CCCCCCCCCHH----HHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            99999875543    333344443333  33445789999999999999999999999999999999754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-38  Score=253.38  Aligned_cols=141  Identities=29%  Similarity=0.520  Sum_probs=106.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhCC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGA   81 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g~   81 (225)
                      |||||||||+|||++.++  .+||+|||+|+.... ....+.+||+.|+|||++.+..|+.+ +||||+||++|+|++|+
T Consensus       125 ~IiHRDiKP~NILl~~~~--~vkl~DFGla~~~~~-~~~~~~~GT~~Y~APEvl~~~~y~~~-~DiWSlGvil~ell~G~  200 (322)
T d1s9ja_         125 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ-SDIWSMGLSLVEMAVGR  200 (322)
T ss_dssp             CCCCSCCSGGGEEECTTC--CEEECCCCCCHHHHH-HTC---CCSSCCCCHHHHHCSCCCTT-HHHHHHHHHHHHHHHSS
T ss_pred             CEEccccCHHHeeECCCC--CEEEeeCCCccccCC-CccccccCCccccCchHHcCCCCCcH-HHHHHHHHHHHHHHHCC
Confidence            799999999999998776  799999999985432 23345689999999999999888766 99999999999999999


Q ss_pred             CCCCCCCChhHHH--------------------------------------HHHHHHhcccccCCCCCCCCHHHHHHHHh
Q 027327           82 YPFEDPEDPRNFK--------------------------------------TTIQRILSVHYSIPGYVRVSLECRHLLSR  123 (225)
Q Consensus        82 ~pf~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~  123 (225)
                      .||.+........                                      .....+............+|.++++||.+
T Consensus       201 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~  280 (322)
T d1s9ja_         201 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK  280 (322)
T ss_dssp             CCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHH
Confidence            9997654322100                                      00111111111111112368899999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCc
Q 027327          124 IFVADPEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       124 ~l~~dP~~R~s~~eil~hp~~~~  146 (225)
                      ||.+||.+|||++|+|+||||++
T Consensus       281 ~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         281 CLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HcCCChhHCcCHHHHhhCHhhCc
Confidence            99999999999999999999975

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=7.7e-38  Score=254.64  Aligned_cols=142  Identities=30%  Similarity=0.562  Sum_probs=116.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.+..+.+||+|||+|+............||+.|||||++.+..|+.+ +|||||||++|+|++|
T Consensus       143 ~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~-~DiwSlGvilyell~G  221 (350)
T d1koaa2         143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY-TDMWSVGVLSYILLSG  221 (350)
T ss_dssp             TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHH-HHHHHHHHHHHHHHHS
T ss_pred             cCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChh-HhhhhhhHHHHHHHhC
Confidence            589999999999999765445799999999987666555556789999999999998888654 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +.||.+.+....    ...+....+..+  ....+++++++||.+||++||.+|||+.|+|+||||...
T Consensus       222 ~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         222 LSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             SCSSCCSSHHHH----HHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred             CCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            999987654333    333443333322  234689999999999999999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-37  Score=244.33  Aligned_cols=136  Identities=26%  Similarity=0.484  Sum_probs=106.7

Q ss_pred             ceEecCCCCCcEEEcC-CCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            2 QICHRDLKLENTLLDG-SKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~-~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||||||||+|||++. ++  .+||+|||+|+... .......+||+.|+|||++.+ .|+ .++|||||||++|+|++|
T Consensus       134 ~IiHrDiKp~NILl~~~~~--~~Kl~DFGla~~~~-~~~~~~~~GT~~Y~aPE~~~~-~~~-~~~DIwSlGvilyel~~g  208 (270)
T d1t4ha_         134 PIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEE-KYD-ESVDVYAFGMCMLEMATS  208 (270)
T ss_dssp             CCCCSCCCGGGEEESSTTS--CEEECCTTGGGGCC-TTSBEESCSSCCCCCGGGGGT-CCC-THHHHHHHHHHHHHHHHS
T ss_pred             CEEeCCcChhhceeeCCCC--CEEEeecCcceecc-CCccCCcccCccccCHHHhCC-CCC-CcCchhhHHHHHHHHHHC
Confidence            3999999999999964 44  69999999997532 223345689999999999865 465 459999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFL  145 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~  145 (225)
                      +.||.+......   +...+............+++++++||.+||++||++|||+.|+++||||+
T Consensus       209 ~~Pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         209 EYPYSECQNAAQ---IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             SCTTTTCSSHHH---HHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             CCCCCCcccHHH---HHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            999987655433   23333333222222335789999999999999999999999999999995

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.4e-37  Score=253.21  Aligned_cols=142  Identities=30%  Similarity=0.549  Sum_probs=117.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++....+.+||+|||+|+............||+.|+|||++.+..|+.+ +|||||||++|+|++|
T Consensus       146 ~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvilyelltG  224 (352)
T d1koba_         146 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY-TDMWAIGVLGYVLLSG  224 (352)
T ss_dssp             TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHH-HHHHHHHHHHHHHHHS
T ss_pred             CCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCc-cchHHHHHHHHHHHhC
Confidence            589999999999999855445899999999987766655566789999999999998888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccC--CCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSI--PGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +.||.+......    ...+....+..  .....+++++++||.+||++||.+|||+.|+|+||||+..
T Consensus       225 ~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         225 LSPFAGEDDLET----LQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             CCSSCCSSHHHH----HHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             CCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            999987655333    33344333332  2345689999999999999999999999999999999764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=247.95  Aligned_cols=143  Identities=27%  Similarity=0.377  Sum_probs=116.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++..+  .+||+|||+++............||+.|+|||++.+..|+.+ +||||+||++|+|++|
T Consensus       135 ~~ivHrDiKp~NILi~~~~--~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~-~DiwSlG~il~ell~g  211 (305)
T d1blxa_         135 HRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP-VDLWSVGCIFAEMFRR  211 (305)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTH-HHHHHHHHHHHHHHHS
T ss_pred             CCEEecCCCccEEEEcCCC--CeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChh-ehhhchHHHHHHHHHC
Confidence            5899999999999998776  799999999987665555667789999999999998888755 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccc-c--------------------CCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHY-S--------------------IPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ  139 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil  139 (225)
                      +.||.+.+....+..+......... .                    ......+++.+++||++||++||.+|||+.|+|
T Consensus       212 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L  291 (305)
T d1blxa_         212 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL  291 (305)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence            9999887665555554433221100 0                    011234788999999999999999999999999


Q ss_pred             cCcccCc
Q 027327          140 KHPWFLK  146 (225)
Q Consensus       140 ~hp~~~~  146 (225)
                      +||||+.
T Consensus       292 ~Hpff~~  298 (305)
T d1blxa_         292 SHPYFQD  298 (305)
T ss_dssp             TSGGGTT
T ss_pred             cChhhcC
Confidence            9999974

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-38  Score=255.51  Aligned_cols=148  Identities=34%  Similarity=0.642  Sum_probs=116.0

Q ss_pred             CceEecCCCCCcEEEcCCC-CCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSK-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++... .+.+||+|||+|+...........+||+.|+|||++.+..|+.+ +|||||||++|+|++
T Consensus       130 ~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~-~DiwSlGvily~llt  208 (335)
T d2ozaa1         130 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLC  208 (335)
T ss_dssp             TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHH-HHHHHHHHHHHHHTT
T ss_pred             cCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHH-HHHHhhchhHHHHhh
Confidence            5899999999999997533 34799999999987766666677789999999999988888755 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCC--CCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPG--YVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      |+.||.+.............+....+..|.  ...+|+++++||++||++||.+|||+.++++||||.+...
T Consensus       209 g~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  280 (335)
T d2ozaa1         209 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  280 (335)
T ss_dssp             SSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCC
Confidence            999998765544444444333333333332  2358899999999999999999999999999999976533

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-37  Score=248.97  Aligned_cols=137  Identities=35%  Similarity=0.647  Sum_probs=114.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCC-CCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+|+.... .......+||+.|+|||++.+..|+.+ +|||||||++|+|++
T Consensus       124 ~~iiHRDlKP~NILl~~~g--~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~-~DiwSlGvilyeml~  200 (337)
T d1o6la_         124 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMC  200 (337)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTT-HHHHHHHHHHHHHHH
T ss_pred             cCccccccCHHHeEecCCC--CEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChh-hcccchhhHHHHHHH
Confidence            5899999999999998776  799999999986544 334455689999999999999988655 999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      |+.||.+.+..    .....+.......|  ..+|+++++||++||++||.+|++     ++++++||||..
T Consensus       201 G~~pf~~~~~~----~~~~~i~~~~~~~p--~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         201 GRLPFYNQDHE----RLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             SSCSSCCSSHH----HHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             CCCCCCCcCHH----HHHHHHhcCCCCCC--ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCccccc
Confidence            99999876543    33444444444444  358999999999999999999994     899999999975

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-37  Score=245.71  Aligned_cols=137  Identities=34%  Similarity=0.614  Sum_probs=110.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|||||||||+|||++.++  .+||+|||+|+......   .....+||+.|+|||++.+..|+.+ +|||||||++|+|
T Consensus       127 ~~iiHrDiKp~NIll~~~~--~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~-~DiwSlGvilyel  203 (288)
T d1uu3a_         127 KGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS-SDLWALGCIIYQL  203 (288)
T ss_dssp             TTEECSCCSGGGEEECTTS--CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHH-HHHHHHHHHHHHH
T ss_pred             ccEEcCcCCccccccCCCc--eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcc-cceehhhHHHHHH
Confidence            5899999999999998776  79999999998654322   2334579999999999988888654 9999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHH------HhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPE------IQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~e------il~hp~~~~  146 (225)
                      ++|+.||.+.+..    ....++....+.+|  ..+++++++||++||++||.+|||++|      +++||||..
T Consensus       204 l~g~~Pf~~~~~~----~~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~  272 (288)
T d1uu3a_         204 VAGLPPFRAGNEY----LIFQKIIKLEYDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  272 (288)
T ss_dssp             HHSSCSSCCSSHH----HHHHHHHTTCCCCC--TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             hhCCCCCCCcCHH----HHHHHHHcCCCCCC--ccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCC
Confidence            9999999875443    33444555555444  358999999999999999999999987      588999965

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-37  Score=248.84  Aligned_cols=139  Identities=28%  Similarity=0.371  Sum_probs=111.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccC---CccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSR---KEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  .+||+|||+|+....   .....||+.|+|||++.+   ..|+ .++|||||||++|+|
T Consensus       134 ~~iiHrDiKp~NILl~~~~--~~Kl~DFG~a~~~~~---~~~~~GT~~Y~APE~~~~~~~~~y~-~~~DiwSlGvilyel  207 (309)
T d1u5ra_         134 HNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYD-GKVDVWSLGITCIEL  207 (309)
T ss_dssp             TTCBCCCCSGGGEEEETTT--EEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHTTTTSCCBC-THHHHHHHHHHHHHH
T ss_pred             CCEeccCCCcceEEECCCC--CEEEeecccccccCC---CCccccCccccCHHHHhccCCCCcC-chhhhhhHHHHHHHH
Confidence            5899999999999998776  799999999986433   245679999999999864   3354 459999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCC
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLP  149 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~  149 (225)
                      ++|..||.+......+    .++............+|+++++||.+||+.||.+|||++++|+||||.+..+
T Consensus       208 ~~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~  275 (309)
T d1u5ra_         208 AERKPPLFNMNAMSAL----YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP  275 (309)
T ss_dssp             HHSSCTTTTSCHHHHH----HHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HHCCCCCCCCCHHHHH----HHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCC
Confidence            9999999876543332    3333333333334468999999999999999999999999999999976543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=245.87  Aligned_cols=141  Identities=30%  Similarity=0.439  Sum_probs=110.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCcccccc-----CCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLS-----RKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~-----~~~~~~~~~DiwslG~il   74 (225)
                      +|||||||||+|||++.++  .+||+|||+|+..... ....+..||+.|+|||++.     +..|+ .++|||||||++
T Consensus       129 ~~ivHrDiKp~NIll~~~~--~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~-~k~DiwSlGvil  205 (288)
T d2jfla1         129 NKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD-YKADVWSLGITL  205 (288)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTT-THHHHHHHHHHH
T ss_pred             CCEEEeecChhheeECCCC--CEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCC-hhhhHHHHHHHH
Confidence            5899999999999998777  7999999998754322 1223567999999999984     33444 459999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      |+|++|+.||.+.+....+..+..   ......+....+++++++||.+||+.||.+|||+.|+++||||...
T Consensus       206 yemltg~~Pf~~~~~~~~~~~i~~---~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         206 IEMAEIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             HHHHHSSCTTTTSCGGGHHHHHHH---SCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHc---CCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            999999999988766544433322   1122233345689999999999999999999999999999999753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.5e-37  Score=245.38  Aligned_cols=136  Identities=39%  Similarity=0.662  Sum_probs=113.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  .+||+|||+|+....  ...+.+||+.|+|||++.+..|+.+ +|||||||++|+|++|
T Consensus       123 ~~iiHrDiKp~NILl~~~g--~vkL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~l~~~~y~~~-~DiwSlGvilyemltG  197 (316)
T d1fota_         123 KDIIYRDLKPENILLDKNG--HIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKS-IDWWSFGILIYEMLAG  197 (316)
T ss_dssp             TTEECCCCCGGGEEECTTS--CEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTT-HHHHHHHHHHHHHHHS
T ss_pred             CcEEccccCchheeEcCCC--CEEEecCccceEecc--ccccccCcccccCHHHHcCCCCCch-hhccccchhHHHHHhC
Confidence            5899999999999998776  799999999986543  3345689999999999998888765 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      +.||.+.+..    ....++.......|  ..++++++++|.+||.+||.+|+     |++++++||||++-
T Consensus       198 ~~Pf~~~~~~----~~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         198 YTPFYDSNTM----KTYEKILNAELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             SCTTCCSSHH----HHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CCCCCCcCHH----HHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence            9999875543    33444455444444  35899999999999999999996     89999999999763

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.2e-37  Score=250.21  Aligned_cols=140  Identities=29%  Similarity=0.437  Sum_probs=111.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  .+||+|||+|+..... .....+||+.|+|||++......+.++|||||||++|+|++|
T Consensus       126 ~~iiHrDlKP~NILl~~~g--~iKl~DFGla~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG  202 (364)
T d1omwa3         126 RFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG  202 (364)
T ss_dssp             TTEECCCCSGGGEEECSSS--CEEECCCTTCEECSSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCccceeeccceeEEcCCC--cEEEeeeceeeecCCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhC
Confidence            5899999999999998776  7999999999865433 345568999999999997554334559999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCC-----HHHHhcCcccCc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRIT-----IPEIQKHPWFLK  146 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s-----~~eil~hp~~~~  146 (225)
                      +.||....... ...............  +..+++++++||.+||.+||.+|||     |+++++||||+.
T Consensus       203 ~~Pf~~~~~~~-~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~  270 (364)
T d1omwa3         203 HSPFRQHKTKD-KHEIDRMTLTMAVEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  270 (364)
T ss_dssp             SCSSCSSCSSC-HHHHHHHSSSCCCCC--CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred             CCCCCCCCHHH-HHHHHHhcccCCCCC--CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence            99998755432 223333333333333  3468999999999999999999999     799999999975

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-37  Score=243.63  Aligned_cols=145  Identities=28%  Similarity=0.345  Sum_probs=113.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  .+||+|||+|+...... .....+||+.|+|||++.+..+.+.++|||||||++|+|++
T Consensus       119 ~~iiHrDiKp~NIli~~~~--~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~  196 (299)
T d1ua2a_         119 HWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL  196 (299)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             cceecccCCcceEEecCCC--ccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHh
Confidence            5899999999999998776  79999999997654433 33456799999999998766554556999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhccccc----------------CC------CCCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYS----------------IP------GYVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~----------------~~------~~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      |..||.+....+.+..+.+........                .+      ....+++++++||++||++||++||||+|
T Consensus       197 g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e  276 (299)
T d1ua2a_         197 RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQ  276 (299)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             CcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            999998877665555544432211100                00      01246889999999999999999999999


Q ss_pred             HhcCcccCcC
Q 027327          138 IQKHPWFLKN  147 (225)
Q Consensus       138 il~hp~~~~~  147 (225)
                      +|+||||+..
T Consensus       277 ~L~Hp~f~~~  286 (299)
T d1ua2a_         277 ALKMKYFSNR  286 (299)
T ss_dssp             HHTSGGGTSS
T ss_pred             HhCCHhhCCC
Confidence            9999999754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-37  Score=244.53  Aligned_cols=135  Identities=30%  Similarity=0.495  Sum_probs=99.9

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||||||||+|||++.++  .+||+|||+|+...... .....+||+.|+|||++.+..|+.+ +|||||||++|+|++|
T Consensus       134 ~IiHrDiKp~NIll~~~~--~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~-~DIwSlGvilyel~tg  210 (269)
T d2java1         134 TVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCAL  210 (269)
T ss_dssp             ------CCGGGEEECTTS--CEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHH-HHHHHHHHHHHHHHHS
T ss_pred             CEEeCcCchhhcCcCCCC--cEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChH-HHHHhhCHHHHHHhhC
Confidence            499999999999998776  79999999998654432 3345679999999999988888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCccc
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWF  144 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~  144 (225)
                      +.||.+.+..    .....+...... +.+..+|+++++||.+||+.||.+|||+.|+++|||+
T Consensus       211 ~~Pf~~~~~~----~~~~~i~~~~~~-~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         211 MPPFTAFSQK----ELAGKIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             SCSCCCSSHH----HHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CCCCCCCCHH----HHHHHHHcCCCC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            9999875443    233334333332 2234689999999999999999999999999999995

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.9e-37  Score=248.14  Aligned_cols=136  Identities=31%  Similarity=0.557  Sum_probs=112.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  ++||+|||+|+....  ...+..||+.|||||++.+..|+.+ +|||||||++|+|++|
T Consensus       160 ~~iiHRDIKP~NILl~~~g--~ikL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~~~~~~~~~~-~DiwSlGvilyemltG  234 (350)
T d1rdqe_         160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKA-VDWWALGVLIYEMAAG  234 (350)
T ss_dssp             TTEECCCCSGGGEEECTTS--CEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHHS
T ss_pred             CCEecCcCCHHHcccCCCC--CEEeeeceeeeeccc--ccccccCccccCCHHHHcCCCCCcc-ccccchhHHHHHHHhC
Confidence            5899999999999998776  799999999986543  2345689999999999998888655 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~~  147 (225)
                      +.||.+.+..    ....++.......+  ..+++++.+||++||.+||.+|+     |+++|++||||...
T Consensus       235 ~~Pf~~~~~~----~~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         235 YPPFFADQPI----QIYEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             SCSSCCSSHH----HHHHHHHHCCCCCC--TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             CCCCCCcCHH----HHHHHHhcCCCCCC--ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            9999875443    33444444444443  35899999999999999999995     99999999999753

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-37  Score=241.39  Aligned_cols=134  Identities=38%  Similarity=0.608  Sum_probs=109.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.+.. .+||+|||+|+.... ....+..||+.|+|||++.+..+.+.++|||||||++|+|++|
T Consensus       129 ~~iiHrDiKp~NIll~~~~~-~vkl~DFG~a~~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g  206 (273)
T d1xwsa_         129 CGVLHRDIKDENILIDLNRG-ELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG  206 (273)
T ss_dssp             TTEECSCCSGGGEEEETTTT-EEEECCCTTCEECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCccccCcccceEEecCCC-eEEECccccceeccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhC
Confidence            58999999999999985432 699999999975433 2334567999999999998887766668999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKNL  148 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~  148 (225)
                      +.||....          .+.......+  ..+|+++++||++||.+||.+|||++|+++||||++..
T Consensus       207 ~~Pf~~~~----------~i~~~~~~~~--~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         207 DIPFEHDE----------EIIRGQVFFR--QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             SCSCCSHH----------HHHHCCCCCS--SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             CCCCCCch----------HHhhcccCCC--CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            99997521          1222333333  35899999999999999999999999999999997643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-37  Score=242.96  Aligned_cols=142  Identities=35%  Similarity=0.653  Sum_probs=115.0

Q ss_pred             CceEecCCCCCcEEEcCCCC--CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA--PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~--~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|||||||||+|||++.++.  ..+||+|||+|+............||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       132 ~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~-~DiwSlGvilyell  210 (293)
T d1jksa_         132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILL  210 (293)
T ss_dssp             TTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHH
T ss_pred             cceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCc-ccchhhhHHHHHHH
Confidence            48999999999999976542  2599999999987766666667789999999999988777655 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|+.||.+.+...    ....+.......+  ....+|.++++||++||+.||.+|||++++++||||+..
T Consensus       211 ~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         211 SGASPFLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             HSSCSSCCSSHHH----HHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred             cCCCCCCCCCHHH----HHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            9999998755433    3333444333322  224689999999999999999999999999999999754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.9e-36  Score=236.71  Aligned_cols=141  Identities=36%  Similarity=0.610  Sum_probs=113.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCC-----ccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRK-----EYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~-----~~~~~~~DiwslG~il~   75 (225)
                      +|||||||||+|||++.++  .+||+|||+++...........+||+.|+|||++.+.     ...+.++||||+||++|
T Consensus       129 ~~ivHrDlkp~Nill~~~~--~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvily  206 (277)
T d1phka_         129 LNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY  206 (277)
T ss_dssp             TTEECSCCSGGGEEECTTC--CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred             cCCcccccccceEEEcCCC--CeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhh
Confidence            5899999999999998776  7999999999876665555667899999999998532     22244599999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhccc--ccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVH--YSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      +|++|+.||.+.......    ..+....  +..+...++|+++++||.+||++||.+|||+.+|++||||++.
T Consensus       207 eml~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         207 TLLAGSPPFWHRKQMLML----RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHHHSSCSSCCSSHHHHH----HHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             hhccCCCCCCCCCHHHHH----HHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            999999999876543332    3333333  2334445799999999999999999999999999999999753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-36  Score=237.59  Aligned_cols=144  Identities=27%  Similarity=0.405  Sum_probs=113.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  .+||+|||+|+..... .......||+.|+|||++....+.+.++||||+||++|+|++
T Consensus       121 ~~IiHrDiKpeNIl~~~~~--~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~  198 (298)
T d1gz8a_         121 HRVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT  198 (298)
T ss_dssp             TTCCCSCCCGGGEEECTTS--CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCEEccccCchheeecccC--cceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhh
Confidence            5899999999999998776  7999999999765432 334455799999999999888877777999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc--------------cCC---------CCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY--------------SIP---------GYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~--------------~~~---------~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||.+.+....+..+.........              ..+         ....++.++++||++||++||.+|||+.
T Consensus       199 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~  278 (298)
T d1gz8a_         199 RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK  278 (298)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHH
Confidence            99999876655544444432211110              000         0124678999999999999999999999


Q ss_pred             HHhcCcccCc
Q 027327          137 EIQKHPWFLK  146 (225)
Q Consensus       137 eil~hp~~~~  146 (225)
                      |+++||||++
T Consensus       279 ell~H~ff~~  288 (298)
T d1gz8a_         279 AALAHPFFQD  288 (298)
T ss_dssp             HHHTSGGGTT
T ss_pred             HHhCCHhhcc
Confidence            9999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-35  Score=239.21  Aligned_cols=145  Identities=32%  Similarity=0.441  Sum_probs=114.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++. .+||+|||+++.........+.+|++.|+|||.+.+....+.++||||+||++|+|++|
T Consensus       141 ~~IiHrDiKp~NILl~~~~~-~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g  219 (350)
T d1q5ka_         141 FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG  219 (350)
T ss_dssp             TTEECCCCCGGGEEECTTTC-CEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHT
T ss_pred             cCCcccCCCcceEEEecCCC-ceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhC
Confidence            58999999999999986643 69999999998776666667778999999999987665445669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc----------c---cccCC----------CCCCCCHHHHHHHHhhcccCCCCCCCHHH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS----------V---HYSIP----------GYVRVSLECRHLLSRIFVADPEKRITIPE  137 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~----------~---~~~~~----------~~~~~~~~~~~li~~~l~~dP~~R~s~~e  137 (225)
                      +.||........+..+......          .   ....+          ....+++++.+||.+||.+||.+|||+.|
T Consensus       220 ~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e  299 (350)
T d1q5ka_         220 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE  299 (350)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            9999877655544443322110          0   00001          12347889999999999999999999999


Q ss_pred             HhcCcccCc
Q 027327          138 IQKHPWFLK  146 (225)
Q Consensus       138 il~hp~~~~  146 (225)
                      +|+||||.+
T Consensus       300 ~L~Hp~f~~  308 (350)
T d1q5ka_         300 ACAHSFFDE  308 (350)
T ss_dssp             HHTSGGGGG
T ss_pred             HhcCHhhcc
Confidence            999999975

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=238.96  Aligned_cols=137  Identities=39%  Similarity=0.690  Sum_probs=112.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  ++||+|||+++....... .....||+.|+|||++.+..|+. ++|||||||++|+|++
T Consensus       122 ~~iiHrDikp~NiL~~~~~--~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwSlGvilyemlt  198 (320)
T d1xjda_         122 KGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNH-SVDWWSFGVLLYEMLI  198 (320)
T ss_dssp             TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCT-HHHHHHHHHHHHHHHH
T ss_pred             CCeeeccCcccceeecCCC--ceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCc-hhhhhhhhHHHHHHHh
Confidence            5899999999999998776  799999999986544333 33457999999999999988875 4999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHH-HHhcCcccCc
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIP-EIQKHPWFLK  146 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~-eil~hp~~~~  146 (225)
                      |+.||.+.+...    ...++....+..|  ..+|+++++||++||.+||.+|||+. ++++||||++
T Consensus       199 G~~PF~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         199 GQSPFHGQDEEE----LFHSIRMDNPFYP--RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             SSCSSCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             CCCCCCCCCHHH----HHHHHHcCCCCCC--ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence            999998765433    3334444444444  35899999999999999999999995 8999999975

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.2e-35  Score=234.16  Aligned_cols=144  Identities=25%  Similarity=0.365  Sum_probs=108.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  .+||+|||++........ .....+++.|+|||.+.+..+.+.++|||||||++|+|++
T Consensus       119 ~~IvHrDiKp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~  196 (286)
T d1ob3a_         119 RRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN  196 (286)
T ss_dssp             TTCCCSCCCGGGEEECTTS--CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             CcEEecCCCCceeeEcCCC--CEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHH
Confidence            5899999999999998776  799999999876433322 3344689999999999877766677999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc-------c----------------CCCCCCCCHHHHHHHHhhcccCCCCCCCHH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY-------S----------------IPGYVRVSLECRHLLSRIFVADPEKRITIP  136 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~-------~----------------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~  136 (225)
                      |+.||.+.+....+............       .                ......+++.+++||++||++||++|||++
T Consensus       197 G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~  276 (286)
T d1ob3a_         197 GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK  276 (286)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHH
Confidence            99999876655554444332211100       0                001234788999999999999999999999


Q ss_pred             HHhcCcccCc
Q 027327          137 EIQKHPWFLK  146 (225)
Q Consensus       137 eil~hp~~~~  146 (225)
                      |+++||||++
T Consensus       277 ell~Hp~f~~  286 (286)
T d1ob3a_         277 QALEHAYFKE  286 (286)
T ss_dssp             HHHTSGGGGC
T ss_pred             HHhcCcccCc
Confidence            9999999964

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=235.61  Aligned_cols=148  Identities=28%  Similarity=0.403  Sum_probs=111.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|||||||||+|||++.++  .+||+|||+++......    .....+||+.|+|||++......+.++||||+||++|+
T Consensus       128 ~~iiHRDIKp~NILl~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~e  205 (345)
T d1pmea_         128 ANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE  205 (345)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCcceEEECCCC--CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehH
Confidence            5899999999999998776  79999999997543322    23445799999999999666555566999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhccc----------------ccCC---------CCCCCCHHHHHHHHhhcccCCCC
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVH----------------YSIP---------GYVRVSLECRHLLSRIFVADPEK  131 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------------~~~~---------~~~~~~~~~~~li~~~l~~dP~~  131 (225)
                      |++|+.||....................                ...+         ....+++++++||.+||++||.+
T Consensus       206 ml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  285 (345)
T d1pmea_         206 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK  285 (345)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTT
T ss_pred             HhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhH
Confidence            9999999987654433322222111000                0000         12357889999999999999999


Q ss_pred             CCCHHHHhcCcccCcCCCc
Q 027327          132 RITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus       132 R~s~~eil~hp~~~~~~~~  150 (225)
                      |||++++|+||||.+....
T Consensus       286 R~ta~e~L~hpf~~~~~~~  304 (345)
T d1pmea_         286 RIEVEQALAHPYLEQYYDP  304 (345)
T ss_dssp             SCCHHHHHTSGGGTTTCCG
T ss_pred             CcCHHHHhcCHhhccCCCC
Confidence            9999999999999865443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-36  Score=242.28  Aligned_cols=142  Identities=27%  Similarity=0.549  Sum_probs=116.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++...+||+|||+++............+++.|+|||.+.+..|+.+ +|||||||++|+|++|
T Consensus       121 ~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~-~DiWSlGvily~ll~G  199 (321)
T d1tkia_         121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA-TDMWSLGTLVYVLLSG  199 (321)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHH-HHHHHHHHHHHHHHHS
T ss_pred             cCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCch-hhcccHHHHHHHHHhC
Confidence            589999999999999876655799999999987655555556679999999999988888654 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcccccCC--CCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcccCcC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVHYSIP--GYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPWFLKN  147 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~  147 (225)
                      ..||.......    ....+....+..+  .+..+|+++++||.+||.+||.+|||+.|+++||||++.
T Consensus       200 ~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         200 INPFLAETNQQ----IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             SCTTCCSSHHH----HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CCCCCCCCHHH----HHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            99998765433    3344444443332  223589999999999999999999999999999999754

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=233.11  Aligned_cols=145  Identities=23%  Similarity=0.329  Sum_probs=108.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC-----CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH-----SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~-----~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +|||||||||+|||++.++  .+||+|||+++.....     ......+||+.|+|||++.+....+.++||||+||++|
T Consensus       136 ~~ivHrDlKp~NILl~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~  213 (318)
T d3blha1         136 NKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA  213 (318)
T ss_dssp             TTEECCCCCGGGEEECTTS--CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             CCEEecCcCchheeecCCC--cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceee
Confidence            5899999999999998777  7999999999754321     22334579999999999976654445699999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCC--------------------------CCCCHHHHHHHHhhcccCC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGY--------------------------VRVSLECRHLLSRIFVADP  129 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~dP  129 (225)
                      +|++|+.||.+.........+..............                          ...++.+++||.+||++||
T Consensus       214 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP  293 (318)
T d3blha1         214 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP  293 (318)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSST
T ss_pred             eHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCCh
Confidence            99999999987655444433333221111100000                          0136678899999999999


Q ss_pred             CCCCCHHHHhcCcccCcC
Q 027327          130 EKRITIPEIQKHPWFLKN  147 (225)
Q Consensus       130 ~~R~s~~eil~hp~~~~~  147 (225)
                      ++|||++|+|+||||+..
T Consensus       294 ~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         294 AQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             TTSCCHHHHHHSGGGSSS
T ss_pred             hHCcCHHHHHcChhhccC
Confidence            999999999999999854

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-34  Score=233.58  Aligned_cols=143  Identities=28%  Similarity=0.370  Sum_probs=111.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  .+||+|||+|+....  .....+||+.|+|||++.+..+.+.++||||+||++|+|++|
T Consensus       140 ~~IiHrDiKp~NIL~~~~~--~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g  215 (346)
T d1cm8a_         140 AGIIHRDLKPGNLAVNEDC--ELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG  215 (346)
T ss_dssp             TTEECCCCCGGGEEECTTC--CEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCCcccccCcchhhccccc--ccccccccceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHC
Confidence            5899999999999998777  799999999986533  334567999999999998766655669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc---------------------ccc----CCCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV---------------------HYS----IPGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~---------------------~~~----~~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||.+......+..........                     ...    ......+++.+++||++||.+||.+|||+
T Consensus       216 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta  295 (346)
T d1cm8a_         216 KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA  295 (346)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             cCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCH
Confidence            99998765544333322211100                     000    01123578999999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      .|||+||||+.-
T Consensus       296 ~eiL~Hp~f~~~  307 (346)
T d1cm8a_         296 GEALAHPYFESL  307 (346)
T ss_dssp             HHHHHSGGGTTT
T ss_pred             HHHhcChhhCcC
Confidence            999999999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-35  Score=238.74  Aligned_cols=177  Identities=25%  Similarity=0.355  Sum_probs=118.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +||+||||||+|||++.++  .+|++|||+++...........++|+.|+|||++.+..++.+ +||||+||++|+|++|
T Consensus       138 ~giiHrDlKP~Nil~~~~~--~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~-~DiwSlG~~l~ell~g  214 (355)
T d2b1pa1         138 AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMVRH  214 (355)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECCCCC---------------CCTTCCHHHHTTCCCCTT-HHHHHHHHHHHHHHHS
T ss_pred             cccccccCCcccccccccc--ceeeechhhhhccccccccccccccccccChhhhcCCCCCCC-cccccccchHHHHhhC
Confidence            5899999999999998776  699999999887666666666789999999999998887665 9999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhc------------------ccccCC--------------C----CCCCCHHHHHHHHhh
Q 027327           81 AYPFEDPEDPRNFKTTIQRILS------------------VHYSIP--------------G----YVRVSLECRHLLSRI  124 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~------------------~~~~~~--------------~----~~~~~~~~~~li~~~  124 (225)
                      +.||.+.+.......+......                  ......              .    ....++++++||++|
T Consensus       215 ~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~m  294 (355)
T d2b1pa1         215 KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM  294 (355)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHH
Confidence            9999876654444333322211                  000000              0    001356789999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHHH
Q 027327          125 FVADPEKRITIPEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQ  180 (225)
Q Consensus       125 l~~dP~~R~s~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (225)
                      |.+||++||||+|||+||||+............++....+......+++++.+.+-
T Consensus       295 L~~dP~~R~ta~elL~Hpw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (355)
T d2b1pa1         295 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIY  350 (355)
T ss_dssp             SCSSTTTSCCHHHHHTSTTTGGGCCHHHHTCCCC-------CCCCCCHHHHHHHHH
T ss_pred             CcCChhHCcCHHHHhcCcccCCCCCcccccCCCCCCCCcchhhhhcCHHHHHHHHH
Confidence            99999999999999999999876554444444444444444556777888866554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.3e-34  Score=233.89  Aligned_cols=145  Identities=26%  Similarity=0.393  Sum_probs=112.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++. .+||+|||+|+...........++|+.|+|||++.+....+.++||||+||++|+|++|
T Consensus       148 ~gIvHrDiKp~NILi~~~~~-~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g  226 (328)
T d3bqca1         148 MGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR  226 (328)
T ss_dssp             TTEECCCCSGGGEEEETTTT-EEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHT
T ss_pred             cccccccccccceEEcCCCC-eeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccC
Confidence            58999999999999986543 59999999998776666666778999999999988766545669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhcc----------c----------------------ccCCCCCCCCHHHHHHHHhhcccC
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSV----------H----------------------YSIPGYVRVSLECRHLLSRIFVAD  128 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~----------~----------------------~~~~~~~~~~~~~~~li~~~l~~d  128 (225)
                      +.||............+......          .                      ...+....+++++++||++||.+|
T Consensus       227 ~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d  306 (328)
T d3bqca1         227 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD  306 (328)
T ss_dssp             CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSS
T ss_pred             CCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCC
Confidence            99997765543222222211100          0                      001112247889999999999999


Q ss_pred             CCCCCCHHHHhcCcccCc
Q 027327          129 PEKRITIPEIQKHPWFLK  146 (225)
Q Consensus       129 P~~R~s~~eil~hp~~~~  146 (225)
                      |.+|||++|+|+||||+.
T Consensus       307 P~~R~ta~e~L~Hp~F~~  324 (328)
T d3bqca1         307 HQSRLTAREAMEHPYFYT  324 (328)
T ss_dssp             GGGSCCHHHHHTSGGGTT
T ss_pred             hhHCcCHHHHhcCcccCC
Confidence            999999999999999975

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-35  Score=230.47  Aligned_cols=139  Identities=24%  Similarity=0.356  Sum_probs=103.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCC---ccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRK---EYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~---~~~~~~~DiwslG~il   74 (225)
                      +|||||||||+|||++.++  .+||+|||+|+......   ......||+.|||||++.+.   .|+ .++|||||||++
T Consensus       123 ~~ivHrDlKp~NiLl~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~-~~sDiwS~Gv~l  199 (276)
T d1uwha_         123 KSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS-FQSDVYAFGIVL  199 (276)
T ss_dssp             TTCCCSCCCGGGEEEETTS--SEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCC-HHHHHHHHHHHH
T ss_pred             CCEeccccCHHHEEEcCCC--CEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCC-chhhhhhhHHHH
Confidence            5899999999999998776  79999999997653322   22345799999999998643   344 459999999999


Q ss_pred             HHHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCc
Q 027327           75 YVMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHP  142 (225)
Q Consensus        75 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp  142 (225)
                      |||++|+.||.+............+.............+++++.+||.+||..||.+|||+.+|+++.
T Consensus       200 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~L  267 (276)
T d1uwha_         200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI  267 (276)
T ss_dssp             HHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            99999999998876655444443332211111122345889999999999999999999999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-35  Score=234.75  Aligned_cols=134  Identities=27%  Similarity=0.431  Sum_probs=108.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  ++||+|||+|+........   .+..||+.|||||++.+..|+.+ +|||||||++|+|
T Consensus       183 ~~IiHRDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~-~DiwS~Gvil~em  259 (325)
T d1rjba_         183 KSCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK-SDVWSYGILLWEI  259 (325)
T ss_dssp             TTEEETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeeeccCchhccccccCC--eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcc-eeccchhHHHHHH
Confidence            5899999999999998776  7999999999865443322   23468999999999988888655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ |+.||.+......+...+    ......+.+..+++++++||.+||+.||++|||+++|++|
T Consensus       260 lt~g~~Pf~~~~~~~~~~~~~----~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         260 FSLGVNPYPGIPVDANFYKLI----QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             TTTSCCSSTTCCCSHHHHHHH----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHH----hcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            97 899998766654444333    3333444445689999999999999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-34  Score=231.08  Aligned_cols=142  Identities=35%  Similarity=0.572  Sum_probs=114.4

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC--CCCCCcccCCCCCccccccCCc-cCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH--SQPKSTVGTPAYIAPEVLSRKE-YDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~--~~~~~~~g~~~y~aPE~l~~~~-~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  .+||+|||+++.....  .......|++.|+|||.+.+.. +.+.++|||||||++|+|
T Consensus       148 ~~ivHrDiKp~Nill~~~~--~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyel  225 (322)
T d1vzoa_         148 LGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL  225 (322)
T ss_dssp             TTCCCCCCCGGGEEECTTS--CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHH
T ss_pred             CCEEeccCCccceeecCCC--CEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHH
Confidence            5899999999999998776  7999999999754332  2234457999999999997654 334569999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCC-----CHHHHhcCcccCc
Q 027327           78 LVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRI-----TIPEIQKHPWFLK  146 (225)
Q Consensus        78 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-----s~~eil~hp~~~~  146 (225)
                      ++|+.||.+.........+...........+  ..+++++++||++||.+||.+||     |++|+++||||++
T Consensus       226 ltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~--~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         226 LTGASPFTVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             HHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcccCCCCCc--ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            9999999887766666666655555444443  35899999999999999999999     5899999999975

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=223.60  Aligned_cols=145  Identities=25%  Similarity=0.381  Sum_probs=110.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC-CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~   79 (225)
                      +|||||||||+|||++.++  .+||+|||.++....... .....+++.|+|||++.+..+.+.++|||||||++|+|++
T Consensus       120 ~~IvHrDiKP~NIli~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~  197 (292)
T d1unla_         120 RNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN  197 (292)
T ss_dssp             TTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTT
T ss_pred             CCEeeecccCcccccccCC--ceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhh
Confidence            5899999999999998766  799999999987654433 3334678889999999877765666999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccc------------------------cCCCCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHY------------------------SIPGYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      |+.||............+........                        .......+++.+++||++||++||.+||||
T Consensus       198 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa  277 (292)
T d1unla_         198 AGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA  277 (292)
T ss_dssp             TSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCH
Confidence            99997655544433333322221110                        001123467899999999999999999999


Q ss_pred             HHHhcCcccCcC
Q 027327          136 PEIQKHPWFLKN  147 (225)
Q Consensus       136 ~eil~hp~~~~~  147 (225)
                      +|+|+||||.+-
T Consensus       278 ~e~L~Hp~f~~~  289 (292)
T d1unla_         278 EEALQHPYFSDF  289 (292)
T ss_dssp             HHHTTSGGGSSC
T ss_pred             HHHhcChhhcCC
Confidence            999999999754

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-33  Score=228.00  Aligned_cols=175  Identities=23%  Similarity=0.330  Sum_probs=120.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  .+|++|||++....  ....+..|++.|+|||++.+..+.+.++|||||||++|+|++|
T Consensus       140 ~giiHrDiKp~NILi~~~~--~~kl~dfg~a~~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g  215 (348)
T d2gfsa1         140 ADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  215 (348)
T ss_dssp             TTCCCCCCCGGGEEECTTC--CEEECCC----CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCCcccccCCccccccccc--cccccccchhcccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhC
Confidence            5899999999999998776  79999999987543  2234567899999999988777666669999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHHHhccc-------------------ccCC------CCCCCCHHHHHHHHhhcccCCCCCCCH
Q 027327           81 AYPFEDPEDPRNFKTTIQRILSVH-------------------YSIP------GYVRVSLECRHLLSRIFVADPEKRITI  135 (225)
Q Consensus        81 ~~pf~~~~~~~~~~~~~~~~~~~~-------------------~~~~------~~~~~~~~~~~li~~~l~~dP~~R~s~  135 (225)
                      +.||.+.+.......+........                   ...+      ....+++++++||++||.+||.+|||+
T Consensus       216 ~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta  295 (348)
T d2gfsa1         216 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA  295 (348)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCH
Confidence            999987665444433332221110                   0000      013578899999999999999999999


Q ss_pred             HHHhcCcccCcCCCcccccccccccCCCCCCccccCHHHHHHHHHH
Q 027327          136 PEIQKHPWFLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQE  181 (225)
Q Consensus       136 ~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (225)
                      .|+|+||||.+...........  ......+.....++++.+++.+
T Consensus       296 ~elL~Hp~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~k~~~~~  339 (348)
T d2gfsa1         296 AQALAHAYFAQYHDPDDEPVAD--PYDQSFESRDLLIDEWKSLTYD  339 (348)
T ss_dssp             HHHHTSGGGTTTCCTTSCCCCC--CCCCGGGGCCCCHHHHHHHHHH
T ss_pred             HHHhcCHhhCCCCCCccCCCCC--CCCCcccchhcCHHHHHHHHHH
Confidence            9999999998643322111111  1111223345566777765543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1e-33  Score=225.84  Aligned_cols=134  Identities=25%  Similarity=0.400  Sum_probs=100.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC---CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  ++||+|||+|+......   ......||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       153 ~~ivHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~-sDiwS~Gvil~el  229 (299)
T d1ywna1         153 RKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEI  229 (299)
T ss_dssp             TTCCCSCCCGGGEEECGGG--CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCCcCCcCCccceeECCCC--cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcc-cceeehHHHHHHH
Confidence            5899999999999998776  79999999997543322   2234579999999999988887655 9999999999999


Q ss_pred             HhC-CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LVG-AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++| ..||.+......+...+..    ....+.+..+++++++||.+||+.||.+|||+.+|++|
T Consensus       230 lt~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         230 FSLGASPYPGVKIDEEFCRRLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HTTSCCSSTTCCCSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHhc----CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            986 5678776655444433332    22223334589999999999999999999999999987

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.6e-33  Score=220.64  Aligned_cols=138  Identities=22%  Similarity=0.282  Sum_probs=105.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|||||||||+|||++.++  .+||+|||+|+......  ......||+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       128 ~~ivHrDiKp~NIll~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~-sDvwS~Gvvl~ell  204 (272)
T d1qpca_         128 RNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK-SDVWSFGILLTEIV  204 (272)
T ss_dssp             TTEECSCCSGGGEEECTTS--CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHH-HHHHHHHHHHHHHH
T ss_pred             CCcccCccchhheeeeccc--ceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCch-hhhhhhHHHHHHHH
Confidence            4899999999999998776  79999999998654332  2234568999999999988877654 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc--CcccC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK--HPWFL  145 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~--hp~~~  145 (225)
                      +|..|+.......   .....+... ...+.+..+++++.+|+.+||+.||++|||+.+|++  |+||.
T Consensus       205 t~~~~~~~~~~~~---~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         205 THGRIPYPGMTNP---EVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             TTTCCSSTTCCHH---HHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCHH---HHHHHHHhc-CCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            9655544333322   222333322 233334568999999999999999999999999988  77774

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.1e-33  Score=223.19  Aligned_cols=136  Identities=23%  Similarity=0.350  Sum_probs=104.8

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......    .....||+.|+|||++.+..++.+ +|||||||++||
T Consensus       126 ~~iiHrDlKp~Nill~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~-sDiwS~Gv~l~e  202 (277)
T d1xbba_         126 SNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK-SDVWSFGVLMWE  202 (277)
T ss_dssp             TTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCcccCCCcchhhcccccC--cccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCch-hhhccchhhhhH
Confidence            4899999999999998777  799999999986443322    223468999999999988888655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHh---cCccc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQ---KHPWF  144 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil---~hp~~  144 (225)
                      |++ |+.||.+.....    ....+... ...+.+..++.++.+||.+||+.||.+|||+.+|+   +|+|+
T Consensus       203 llt~g~~Pf~~~~~~~----~~~~i~~~-~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         203 AFSYGQKPYRGMKGSE----VTAMLEKG-ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHTTTCCSSTTCCHHH----HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HhhCCCCCCCCCCHHH----HHHHHHcC-CCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            997 899998765432    22233322 23333456899999999999999999999999984   56554

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-33  Score=221.18  Aligned_cols=137  Identities=25%  Similarity=0.365  Sum_probs=107.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|||||||||+|||++.++  .+||+|||+|+.......    .....||+.|+|||++.+..++.+ +|||||||++||
T Consensus       128 ~~iiHrDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDVwS~Gv~l~E  204 (285)
T d1u59a_         128 KNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR-SDVWSYGVTMWE  204 (285)
T ss_dssp             TTEECCCCSGGGEEEEETT--EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHH-HHHHHHHHHHHH
T ss_pred             CCeecCcCchhheeeccCC--ceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCcc-chhhcchHHHHH
Confidence            5899999999999998776  799999999986543322    223468899999999988887655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHH---hcCcccC
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEI---QKHPWFL  145 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~ei---l~hp~~~  145 (225)
                      |++ |+.||.+....+.    ...+... ...+.+..+++++.+||.+||..+|++|||+.+|   |+|+|+.
T Consensus       205 ~lt~G~~Pf~~~~~~~~----~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         205 ALSYGQKPYKKMKGPEV----MAFIEQG-KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHTTSCCTTTTCCTHHH----HHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHH----HHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            998 8999987665432    2223322 2233345689999999999999999999999887   5677763

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=7.1e-33  Score=220.86  Aligned_cols=133  Identities=23%  Similarity=0.408  Sum_probs=96.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCC------CcccCCCCCccccccCCccCCCcccHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVLSRKEYDGKIADVWSCGVTL   74 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~------~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il   74 (225)
                      +|||||||||+|||++.++  ++||+|||+|+.........      ...+|+.|+|||++.+..++.+ +|||||||++
T Consensus       147 ~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-sDvwS~Gvvl  223 (299)
T d1jpaa_         147 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA-SDVWSYGIVM  223 (299)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECCC-----------------------CGGGSCHHHHHSCCCCHH-HHHHHHHHHH
T ss_pred             CCCccCccccceEEECCCC--cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcc-cccccchHHH
Confidence            5899999999999998777  79999999998654332211      2357889999999988888655 9999999999


Q ss_pred             HHHHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           75 YVMLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        75 ~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |||++ |+.||.+.....    ....+.. ....+.+..++.++.+|+.+||+.||.+|||+.+|+++
T Consensus       224 ~el~t~g~~Pf~~~~~~~----~~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         224 WEVMSYGERPYWDMTNQD----VINAIEQ-DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHTTSCCTTTTCCHHH----HHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHH----HHHHHHc-CCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99997 899998765432    2233332 23344455789999999999999999999999998765

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8e-33  Score=216.82  Aligned_cols=133  Identities=23%  Similarity=0.420  Sum_probs=93.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+++........  ....||+.|+|||++.+..|+.+ +|||||||++|||+
T Consensus       120 ~~iiHrDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k-~DVwS~Gvil~el~  196 (263)
T d1sm2a_         120 ACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK-SDVWSFGVLMWEVF  196 (263)
T ss_dssp             TTCCCTTCSGGGEEECGGG--CEEECSCC------------------CTTSCCHHHHTTCCCCHH-HHHHHHHHHHHHHH
T ss_pred             cceeecccchhheeecCCC--CeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCch-hhhcchHHHHHHHH
Confidence            4899999999999998777  7999999999865433222  23468999999999998888755 99999999999999


Q ss_pred             hC-CCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 VG-AYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++ .+||..... ..   ....+... ...+.+..+++++.+|+.+||+.||.+|||+++|++|
T Consensus       197 t~~~~~~~~~~~-~~---~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         197 SEGKIPYENRSN-SE---VVEDISTG-FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             TTSCCTTCSCCH-HH---HHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HCCCCCCCCCCH-HH---HHHHHHhc-CCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            95 555554333 22   22223222 2223334578999999999999999999999999986

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-32  Score=217.24  Aligned_cols=133  Identities=20%  Similarity=0.324  Sum_probs=97.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +|||||||||+|||++.++  .+||+|||+++.......    .....||+.|+|||++.+..++.+ +|||||||++||
T Consensus       129 ~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~-sDI~S~Gvil~e  205 (283)
T d1mqba_         129 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA-SDVWSFGIVMWE  205 (283)
T ss_dssp             TTCCCSCCCGGGEEECTTC--CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHH-HHHHHHHHHHHH
T ss_pred             cccccCccccceEEECCCC--eEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCc-ccccccHHHHHH
Confidence            4899999999999998777  799999999986533221    122357899999999988888755 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |+++..||........   ....+.. ....+.+..++.++.+||.+||+.+|.+|||+.+|++
T Consensus       206 l~t~~~~~~~~~~~~~---~~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         206 VMTYGERPYWELSNHE---VMKAIND-GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHTTSCCTTTTCCHHH---HHHHHHT-TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCccccCCHHH---HHHHHhc-cCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            9997666544333332   2222322 2333444568999999999999999999999999976

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-32  Score=214.71  Aligned_cols=133  Identities=22%  Similarity=0.350  Sum_probs=106.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +||+||||||+|||++.++  .+||+|||+++........  ....+|+.|+|||++.+..++.+ +|||||||++|+|+
T Consensus       119 ~~iiH~dlk~~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~k-sDiwS~G~~l~el~  195 (258)
T d1k2pa_         119 KQFLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK-SDIWAFGVLMWEIY  195 (258)
T ss_dssp             TTBCCSCCSGGGEEECTTC--CEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHHH
T ss_pred             cCcccccccceeEEEcCCC--cEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcc-eeecccchhhHhHH
Confidence            5899999999999998766  7999999999755433222  23468999999999998888655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |+.||......+    +...+... ...+.+...++++.+||++||+.||.+|||+++|++|
T Consensus       196 t~g~~Pf~~~~~~~----~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         196 SLGKMPYERFTNSE----TAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             TTSCCTTTTSCHHH----HHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hcCCCCCCCCCHHH----HHHHHHhC-CCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            8 899998766533    23333332 2334445688999999999999999999999999987

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=9.8e-33  Score=218.83  Aligned_cols=133  Identities=22%  Similarity=0.305  Sum_probs=103.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC--CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      +|||||||||+|||++.++  .+||+|||+|+........  ....|++.|+|||++.+..|+.+ +|||||||++|+|+
T Consensus       134 ~~iiHrDlKp~NILl~~~~--~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k-~DiwS~Gv~l~ell  210 (287)
T d1opja_         134 KNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK-SDVWAFGVLLWEIA  210 (287)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHH-HHHHHHHHHHHHHH
T ss_pred             CCcccCccccCeEEECCCC--cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCch-hhhhhHHHHHHHHH
Confidence            5899999999999998776  7999999999865433222  22358899999999988888655 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      +|..||............+    ......+.+..+++++++||.+||+.||.+|||+.++++
T Consensus       211 ~~~~p~~~~~~~~~~~~~i----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         211 TYGMSPYPGIDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             TTSCCSSTTCCHHHHHHHH----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCcchHHHHHHHH----hcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            9777765544433333222    223334444568999999999999999999999999976

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7e-33  Score=218.29  Aligned_cols=133  Identities=22%  Similarity=0.400  Sum_probs=97.0

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC--CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .|||||||||+||+++.++  .+||+|||+|+.......  .....||+.|+|||++.+..|+.+ +|||||||++|+|+
T Consensus       127 ~~iiHrDlKp~NIll~~~~--~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~-~DiwSlGvil~e~l  203 (273)
T d1mp8a_         127 KRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL  203 (273)
T ss_dssp             TTCCCSCCSGGGEEEEETT--EEEECC-------------------CCGGGCCHHHHHHCCCSHH-HHHHHHHHHHHHHH
T ss_pred             cCeeccccchhheeecCCC--cEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCc-cccccchHHHHHHH
Confidence            4899999999999998777  799999999986543322  233468899999999988888655 99999999999999


Q ss_pred             h-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           79 V-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        79 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      + |.+||...........    +... ...+.+..+++++.+||.+||..||.+|||+.+|++|
T Consensus       204 t~g~~P~~~~~~~~~~~~----i~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         204 MHGVKPFQGVKNNDVIGR----IENG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             TTSCCTTTTCCGGGHHHH----HHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcCCCCCCCCCHHHHHHH----HHcC-CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            7 8999987665443332    2222 2234445789999999999999999999999999876

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-32  Score=221.79  Aligned_cols=135  Identities=21%  Similarity=0.388  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC---CCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  ++||+|||+|+........   ....||+.|+|||++.+..|+.+ +|||||||++|||
T Consensus       130 ~~iiHrDlKp~NIll~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~-sDvwS~Gvil~el  206 (317)
T d1xkka_         130 RRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ-SDVWSYGVTVWEL  206 (317)
T ss_dssp             TTCCCSCCCGGGEEEEETT--EEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             cCcccCcchhhcceeCCCC--CeEeeccccceecccccccccccccccCccccChHHHhcCCCChh-hhhhhHHHHHHHH
Confidence            4899999999999998777  7999999999865433222   23358999999999988888655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcCcc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKHPW  143 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~hp~  143 (225)
                      ++ |.+||.+...... ...+..    ....+.+..+++++.+|+.+||..||.+|||+.+|++|..
T Consensus       207 ~t~g~~p~~~~~~~~~-~~~i~~----~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~  268 (317)
T d1xkka_         207 MTFGSKPYDGIPASEI-SSILEK----GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS  268 (317)
T ss_dssp             HTTSCCTTTTSCGGGH-HHHHHH----TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHCCCCCCCCCCHHHH-HHHHHc----CCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHH
Confidence            98 7899987654332 222222    2233344568999999999999999999999999998843

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-32  Score=215.92  Aligned_cols=140  Identities=22%  Similarity=0.315  Sum_probs=103.3

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC--CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVML   78 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll   78 (225)
                      .||+||||||+|||++.++  .+||+|||+++......  ......||+.|+|||++....++.+ +|||||||++|+|+
T Consensus       132 ~~ivH~DlKp~NIll~~~~--~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDI~S~Giil~el~  208 (285)
T d1fmka3         132 MNYVHRDLRAANILVGENL--VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELT  208 (285)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHHH
T ss_pred             hheecccccceEEEECCCC--cEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcH-HhhhcchHHHHHHH
Confidence            4899999999999998776  79999999998653332  2233468999999999988888655 99999999999999


Q ss_pred             hCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc--CcccCcC
Q 027327           79 VGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK--HPWFLKN  147 (225)
Q Consensus        79 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~--hp~~~~~  147 (225)
                      +|..||.........   ...+.. ....+....++.++++||.+||+.||++|||+++|++  ++||...
T Consensus       209 t~~~p~~~~~~~~~~---~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         209 TKGRVPYPGMVNREV---LDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             TTTCCSSTTCCHHHH---HHHHHT-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             hCCCCCCCCCCHHHH---HHHHHh-cCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            976665444433322   222222 2233444568999999999999999999999999987  7888654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-32  Score=214.68  Aligned_cols=133  Identities=24%  Similarity=0.396  Sum_probs=105.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC----CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      +||+||||||+|||++.++  .+||+|||+++.......    .....++..|+|||++.+..++.+ +|||||||++||
T Consensus       130 ~~iiHrDikp~NIll~~~~--~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~-~Di~S~Gvil~e  206 (273)
T d1u46a_         130 KRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA-SDTWMFGVTLWE  206 (273)
T ss_dssp             TTEECSCCCGGGEEEEETT--EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHH-HHHHHHHHHHHH
T ss_pred             CCEeeeeecHHHhcccccc--ceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcc-hhhhhhHHHHHH
Confidence            5899999999999998776  799999999986543322    123357889999999988877655 999999999999


Q ss_pred             HHh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           77 MLV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        77 ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |++ |..||.+.+...    ....+.......+....++.++++||.+||..||++|||+.+|++
T Consensus       207 mlt~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         207 MFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCcCHHH----HHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            997 899998765433    344454555555555678999999999999999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=2.8e-32  Score=215.29  Aligned_cols=136  Identities=24%  Similarity=0.400  Sum_probs=97.2

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC----CCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .|||||||||+|||++.++  .++|+|||.+.......    .....+||+.|+|||++.+..++.+ +|||||||++|+
T Consensus       130 ~~iiHrDiKP~NIll~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~-~DiwSlGvilye  206 (277)
T d1o6ya_         130 NGIIHRDVKPANIMISATN--AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYE  206 (277)
T ss_dssp             TTEECCCCSGGGEEEETTS--CEEECCCTTCEECC----------------TTCCHHHHTTCCCCHH-HHHHHHHHHHHH
T ss_pred             CCccCccccCcccccCccc--cceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcc-eecccchHHHHH
Confidence            4899999999999998777  69999999986443222    2334579999999999988888655 999999999999


Q ss_pred             HHhCCCCCCCCCChhHHHHHHHHHhcccc--cCCCCCCCCHHHHHHHHhhcccCCCCCC-CHHHHhcCccc
Q 027327           77 MLVGAYPFEDPEDPRNFKTTIQRILSVHY--SIPGYVRVSLECRHLLSRIFVADPEKRI-TIPEIQKHPWF  144 (225)
Q Consensus        77 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~-s~~eil~hp~~  144 (225)
                      |++|+.||.+.+.......    +.....  .......+|+++.+||.+||++||.+|| |++++ .|+|.
T Consensus       207 lltG~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~  272 (277)
T d1o6ya_         207 VLTGEPPFTGDSPVSVAYQ----HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLV  272 (277)
T ss_dssp             HHHSSCSCCCSSHHHHHHH----HHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred             HHhCCCCCCCcCHHHHHHH----HHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence            9999999987654333322    222221  1223356899999999999999999999 55554 45554

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=9.5e-32  Score=219.56  Aligned_cols=147  Identities=26%  Similarity=0.406  Sum_probs=103.3

Q ss_pred             CceEecCCCCCcEEEcCCCC----CCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKA----PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYV   76 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~----~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~   76 (225)
                      .||+||||||+|||++..+.    ..+|++|||.+.....  .....+||+.|+|||++.+..++.+ +|+||+||++++
T Consensus       145 ~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~e  221 (362)
T d1q8ya_         145 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCG-ADIWSTACLIFE  221 (362)
T ss_dssp             TCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTH-HHHHHHHHHHHH
T ss_pred             cCcccccCChhHeeeeccCcccccceeeEeeccccccccc--ccccccccccccChhhccccCCCcc-ccccchHHHHHH
Confidence            48999999999999975432    1389999999875432  3345679999999999998888655 999999999999


Q ss_pred             HHhCCCCCCCCCCh------hHHHHHHHHHhc--------------------ccccC----------------CCCCCCC
Q 027327           77 MLVGAYPFEDPEDP------RNFKTTIQRILS--------------------VHYSI----------------PGYVRVS  114 (225)
Q Consensus        77 ll~g~~pf~~~~~~------~~~~~~~~~~~~--------------------~~~~~----------------~~~~~~~  114 (225)
                      |++|+.||......      ..+...+..+..                    .....                ......+
T Consensus       222 l~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (362)
T d1q8ya_         222 LITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA  301 (362)
T ss_dssp             HHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHH
T ss_pred             HHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccC
Confidence            99999999754321      111111110000                    00000                0011235


Q ss_pred             HHHHHHHHhhcccCCCCCCCHHHHhcCcccCcCCCc
Q 027327          115 LECRHLLSRIFVADPEKRITIPEIQKHPWFLKNLPI  150 (225)
Q Consensus       115 ~~~~~li~~~l~~dP~~R~s~~eil~hp~~~~~~~~  150 (225)
                      +++++||.+||.+||.+||||+|||+||||+.....
T Consensus       302 ~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~  337 (362)
T d1q8ya_         302 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM  337 (362)
T ss_dssp             HHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCc
Confidence            678999999999999999999999999999855433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.2e-31  Score=213.89  Aligned_cols=132  Identities=22%  Similarity=0.341  Sum_probs=101.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCC---CCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++.++  .+||+|||+|+.....   ....+..+++.|+|||++.+..|+.+ +|||||||++|||
T Consensus       159 ~~ivHrDlKp~NILld~~~--~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~k-sDVwS~Gvvl~el  235 (301)
T d1lufa_         159 RKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE-SDVWAYGVVLWEI  235 (301)
T ss_dssp             TTCCCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeEeeEEcccceEECCCC--cEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChh-hhhccchhhHHHH
Confidence            4899999999999998776  7999999999754332   22234568899999999998888755 9999999999999


Q ss_pred             HhCC-CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LVGA-YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++|. +||.+....+    ....+.... ..+.+..+++++.+||.+||+.+|.+|||+.+|++
T Consensus       236 l~~~~~p~~~~~~~e----~~~~v~~~~-~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         236 FSYGLQPYYGMAHEE----VIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HTTTCCTTTTSCHHH----HHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HccCCCCCCCCCHHH----HHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9985 5777654433    233333332 22334468999999999999999999999999975

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-31  Score=212.36  Aligned_cols=133  Identities=23%  Similarity=0.326  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHhC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVG   80 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~g   80 (225)
                      +|||||||||+|||++.++  .+||+|||+++............||..|+|||.+.+..|+.+ +|||||||++|+|++|
T Consensus       146 ~~iiHrDlkp~NIL~~~~~--~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~-sDvwSfGvil~ell~~  222 (309)
T d1fvra_         146 KQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN-SDVWSYGVLLWEIVSL  222 (309)
T ss_dssp             TTEECSCCSGGGEEECGGG--CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHH-HHHHHHHHHHHHHHTT
T ss_pred             CCccccccccceEEEcCCC--ceEEccccccccccccccccceecCCcccchHHhccCCCCcc-ceeehhHHHHHHHHhc
Confidence            4899999999999998776  799999999987655555556679999999999988888655 9999999999999997


Q ss_pred             C-CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           81 A-YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        81 ~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      . +||.+.+..    .+...+... ...+.+..+++++++||.+||+.||++|||+.+|++|
T Consensus       223 ~~~p~~~~~~~----~~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         223 GGTPYCGMTCA----ELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             SCCTTTTCCHH----HHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCHH----HHHHHHHhc-CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            5 567654432    333333332 2334445689999999999999999999999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.3e-31  Score=212.08  Aligned_cols=145  Identities=18%  Similarity=0.172  Sum_probs=103.4

Q ss_pred             CceEecCCCCCcEEEcCC-CCCCEEEecCCCccCCCCCC--------CCCCcccCCCCCccccccCCccCCCcccHHHHH
Q 027327            1 MQICHRDLKLENTLLDGS-KAPRLKICDFGYSKSSVLHS--------QPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCG   71 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~-~~~~vkl~Dfg~a~~~~~~~--------~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG   71 (225)
                      +|||||||||+|||++.. ....+||+|||+|+......        ......||+.|+|||++.+..++.+ +||||||
T Consensus       122 ~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG  200 (299)
T d1ckia_         122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR-DDLESLG  200 (299)
T ss_dssp             TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHH-HHHHHHH
T ss_pred             CCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCCh-hhEEecC
Confidence            589999999999998542 22369999999998654322        2234579999999999998887655 9999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHH---HHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHH---HhcCcccC
Q 027327           72 VTLYVMLVGAYPFEDPEDPRNFKTTIQ---RILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPE---IQKHPWFL  145 (225)
Q Consensus        72 ~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~e---il~hp~~~  145 (225)
                      |++|+|++|+.||..............   ........ .....+|+++.+||.+||+.+|.+||++.+   +|+|+|.+
T Consensus       201 ~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         201 YVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE-VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHH-HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChh-HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            999999999999987554333222211   11111111 112358899999999999999999999875   56777665


Q ss_pred             cC
Q 027327          146 KN  147 (225)
Q Consensus       146 ~~  147 (225)
                      +.
T Consensus       280 ~~  281 (299)
T d1ckia_         280 QG  281 (299)
T ss_dssp             HT
T ss_pred             cC
Confidence            43

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.4e-31  Score=210.46  Aligned_cols=132  Identities=23%  Similarity=0.353  Sum_probs=104.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      .|||||||||+|||++.++  .+||+|||+++.......   .....+++.|+|||++.+..|+.+ +|||||||++|+|
T Consensus       154 ~~ivHrDiKp~NiLl~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k-~DiwS~Gvvl~el  230 (299)
T d1fgka_         154 KKCIHRDLAARNVLVTEDN--VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEI  230 (299)
T ss_dssp             TTCCCSCCSGGGEEECTTC--CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCEEeeeecccceeecCCC--CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCch-hhhHHhHHHHHHh
Confidence            4899999999999998776  799999999986543322   233568899999999988888755 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |.+||.+.....    ....+.. ....+.+..+++++++||.+||+.||.+|||+.+|++
T Consensus       231 l~~g~~p~~~~~~~~----~~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         231 FTLGGSPYPGVPVEE----LFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HTTSCCSSTTCCHHH----HHHHHHT-TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCCCCCCCCCCHHH----HHHHHHc-CCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            97 788887655432    2223322 2333444568999999999999999999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.4e-31  Score=209.66  Aligned_cols=133  Identities=20%  Similarity=0.292  Sum_probs=103.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      ++||||||||+|||++.++  ++||+|||+|+.......   .....+|+.|+|||.+.+..++.+ +|||||||++|+|
T Consensus       152 ~~ivHrDlk~~NiLld~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~-~Dv~S~G~il~El  228 (308)
T d1p4oa_         152 NKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY-SDVWSFGVVLWEI  228 (308)
T ss_dssp             TTCBCSCCSGGGEEECTTC--CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeeeceEcCCceeecCCc--eEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcc-cccccHHHHHHHH
Confidence            4799999999999998776  799999999975433322   223368999999999988888655 9999999999999


Q ss_pred             HhCC-CCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           78 LVGA-YPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        78 l~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ++|. .||.+.+....    ...+.... ..+....+++.+.+||.+||+.+|.+|||+.+|+++
T Consensus       229 ~t~~~~p~~~~~~~~~----~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~  288 (308)
T d1p4oa_         229 ATLAEQPYQGLSNEQV----LRFVMEGG-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  288 (308)
T ss_dssp             HHTSCCTTTTSCHHHH----HHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCCCCHHHH----HHHHHhCC-CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9985 77776544332    33333332 233335689999999999999999999999999873

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-30  Score=208.43  Aligned_cols=134  Identities=20%  Similarity=0.282  Sum_probs=101.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCC-----CCcccCCCCCccccccCCccCCCcccHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQP-----KSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLY   75 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~-----~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~   75 (225)
                      +||+||||||+|||++.++  .+||+|||+++........     ....||+.|+|||.+....++.+ +||||||+++|
T Consensus       149 ~~iiHrDLK~~NILl~~~~--~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDI~SfGivl~  225 (311)
T d1r0pa_         149 KKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK-SDVWSFGVLLW  225 (311)
T ss_dssp             TTCCCSCCSGGGEEECTTC--CEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHH-HHHHHHHHHHH
T ss_pred             cCcccCCccHHhEeECCCC--CEEEecccchhhccccccccceecccccccccccChHHHhcCCCCCh-hHhhhhHHHHH
Confidence            4899999999999998776  7999999999865433221     22458899999999988887655 99999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           76 VMLVGAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        76 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      ||++|..||.......   .....+.... ..+.+..+++++.+||.+||..||++|||+.+|++|
T Consensus       226 El~t~~~p~~~~~~~~---~~~~~i~~g~-~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         226 ELMTRGAPPYPDVNTF---DITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHHTTSCCSCC---------CHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHCCCCCCCCCCHH---HHHHHHHcCC-CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999888776543322   2222233222 223334688999999999999999999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-30  Score=201.70  Aligned_cols=131  Identities=22%  Similarity=0.378  Sum_probs=97.7

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCCCCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHHHh-
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLV-   79 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~ll~-   79 (225)
                      ++||||||||+|||++.++  .+||+|||+++....  ......+++.|+|||++.+..++.+ +|||||||++|||++ 
T Consensus       122 ~~ivH~dlkp~Nil~~~~~--~~kl~dfg~s~~~~~--~~~~~~~~~~y~aPE~l~~~~~t~~-sDIwSfG~il~el~t~  196 (262)
T d1byga_         122 NNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASS--TQDTGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSF  196 (262)
T ss_dssp             TTCCCSCCSGGGEEECTTS--CEEECCCCC--------------CCTTTSCHHHHHHCCCCHH-HHHHHHHHHHHHHHTT
T ss_pred             CceeccccchHhheecCCC--CEeecccccceecCC--CCccccccccCCChHHHhCCCCChH-HHHHhHHHHHHHHHHC
Confidence            4899999999999998777  799999999985432  2334568899999999988887654 999999999999998 


Q ss_pred             CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhcC
Q 027327           80 GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQKH  141 (225)
Q Consensus        80 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~h  141 (225)
                      |++||..........    .+.. ....+....+++++++||++||..||.+|||+.+++++
T Consensus       197 ~~~p~~~~~~~~~~~----~i~~-~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         197 GRVPYPRIPLKDVVP----RVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             SCCSCTTSCGGGHHH----HHTT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHH----HHHc-CCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            788887665443322    2222 22333344689999999999999999999999999875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.7e-30  Score=206.15  Aligned_cols=133  Identities=27%  Similarity=0.424  Sum_probs=103.5

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCCC---CCCcccCCCCCccccccCCccCCCcccHHHHHHHHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVM   77 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~~~~~~DiwslG~il~~l   77 (225)
                      +|||||||||+|||++..+  .+||+|||+++.......   .....||+.|+|||++.+..++.+ +|||||||++|+|
T Consensus       164 ~~ivHrDLKp~NIl~~~~~--~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DIwS~G~~l~el  240 (311)
T d1t46a_         164 KNCIHRDLAARNILLTHGR--ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE-SDVWSYGIFLWEL  240 (311)
T ss_dssp             TTCCCSCCSGGGEEEETTT--EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHH-HHHHHHHHHHHHH
T ss_pred             CCeeecccccccccccccC--cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCc-ccccchHHHHHHH
Confidence            4899999999999998776  799999999986543322   223468999999999987777655 9999999999999


Q ss_pred             Hh-CCCCCCCCCChhHHHHHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           78 LV-GAYPFEDPEDPRNFKTTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        78 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      ++ |.+||........+...+..    .........++.++.+||.+||+.||.+|||+.+|++
T Consensus       241 lt~g~p~~~~~~~~~~~~~~i~~----~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         241 FSLGSSPYPGMPVDSKFYKMIKE----GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HTTTCCSSTTCCSSHHHHHHHHH----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHhc----CCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            98 56666665554444443332    2233333468999999999999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=2.7e-29  Score=199.53  Aligned_cols=138  Identities=17%  Similarity=0.164  Sum_probs=100.9

Q ss_pred             CceEecCCCCCcEEEcCC---CCCCEEEecCCCccCCCCC--------CCCCCcccCCCCCccccccCCccCCCcccHHH
Q 027327            1 MQICHRDLKLENTLLDGS---KAPRLKICDFGYSKSSVLH--------SQPKSTVGTPAYIAPEVLSRKEYDGKIADVWS   69 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~---~~~~vkl~Dfg~a~~~~~~--------~~~~~~~g~~~y~aPE~l~~~~~~~~~~Diws   69 (225)
                      +|||||||||+|||++..   ..+.+||+|||+|+.....        ......+||+.|||||++.+..++.+ +||||
T Consensus       120 ~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~-~DiwS  198 (293)
T d1csna_         120 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRR-DDLEA  198 (293)
T ss_dssp             TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH-HHHHH
T ss_pred             CCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChH-HHHHH
Confidence            589999999999999642   2336999999999754322        12334579999999999998887655 99999


Q ss_pred             HHHHHHHHHhCCCCCCCCCChhHHH---HHHHHHhcccccCCCCCCCCHHHHHHHHhhcccCCCCCCCHHHHhc
Q 027327           70 CGVTLYVMLVGAYPFEDPEDPRNFK---TTIQRILSVHYSIPGYVRVSLECRHLLSRIFVADPEKRITIPEIQK  140 (225)
Q Consensus        70 lG~il~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~eil~  140 (225)
                      |||++|+|++|..||.+........   .+......... ......+++++.+++..|+..+|.+||+++.+.+
T Consensus       199 lG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         199 LGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             hhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh-HHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            9999999999999998654432221   11111111110 0112357899999999999999999999877643

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-30  Score=204.88  Aligned_cols=139  Identities=24%  Similarity=0.287  Sum_probs=94.6

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCCCCCC-----CCCCcccCCCCCccccccCCcc-----CCCcccHHHH
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSSVLHS-----QPKSTVGTPAYIAPEVLSRKEY-----DGKIADVWSC   70 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~l~~~~~-----~~~~~Diwsl   70 (225)
                      +|||||||||+|||++.++  .+||+|||+++......     .....+||+.|+|||++.+...     .+.++|||||
T Consensus       127 ~~IvHrDlKp~NILl~~~~--~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~  204 (303)
T d1vjya_         127 PAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             CEEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             CCeeccccCccceEEcCCC--CeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhh
Confidence            4899999999999998776  79999999997543322     2234579999999999865431     1234899999


Q ss_pred             HHHHHHHHhCCCCCCCCCCh-----------hHHHHHHHHHhcccccC--CCC---CCCCHHHHHHHHhhcccCCCCCCC
Q 027327           71 GVTLYVMLVGAYPFEDPEDP-----------RNFKTTIQRILSVHYSI--PGY---VRVSLECRHLLSRIFVADPEKRIT  134 (225)
Q Consensus        71 G~il~~ll~g~~pf~~~~~~-----------~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~li~~~l~~dP~~R~s  134 (225)
                      ||++|||++|..||......           .................  +..   ......+.+|+.+||+.||++|||
T Consensus       205 Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps  284 (303)
T d1vjya_         205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT  284 (303)
T ss_dssp             HHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred             HHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcC
Confidence            99999999998877432210           11122222222222111  111   012235889999999999999999


Q ss_pred             HHHHhcC
Q 027327          135 IPEIQKH  141 (225)
Q Consensus       135 ~~eil~h  141 (225)
                      +.||+++
T Consensus       285 ~~ei~~~  291 (303)
T d1vjya_         285 ALRIKKT  291 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.93  E-value=1.3e-10  Score=85.02  Aligned_cols=31  Identities=32%  Similarity=0.319  Sum_probs=26.9

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCccCC
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSKSS   34 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~~~   34 (225)
                      .||+||||||+|||++.++   ++|+|||+|...
T Consensus       122 ~giiHrDiKP~NILv~~~~---~~liDFG~a~~~  152 (191)
T d1zara2         122 RGIVHGDLSQYNVLVSEEG---IWIIDFPQSVEV  152 (191)
T ss_dssp             TTEECSCCSTTSEEEETTE---EEECCCTTCEET
T ss_pred             CCEEEccCChhheeeeCCC---EEEEECCCcccC
Confidence            5899999999999998654   899999998654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.06  E-value=0.00084  Score=51.48  Aligned_cols=30  Identities=23%  Similarity=0.354  Sum_probs=25.1

Q ss_pred             CceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            1 MQICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         1 ~~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .|+||+|+.+.||+++.+.  ..-+.||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~--v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDE--LSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTE--EEEECCCTTCE
T ss_pred             cccccCCcchhhhhccccc--ceeEecccccc
Confidence            3799999999999998664  45799999764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.64  E-value=0.0079  Score=44.27  Aligned_cols=29  Identities=28%  Similarity=0.311  Sum_probs=23.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.|.|||++.++  .+-|+||+.+.
T Consensus       184 ~l~HgD~~~~Nil~~~~~--~~~lIDwe~a~  212 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGK--VSGFIDLGRSG  212 (263)
T ss_dssp             EEECSCCCTTSEEEETTE--EEEECCCTTCE
T ss_pred             EEEEeeccCcceeecCCc--eEEEeechhcc
Confidence            379999999999998654  35699998764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.35  E-value=0.0071  Score=44.33  Aligned_cols=29  Identities=21%  Similarity=0.270  Sum_probs=23.7

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|+.|.|||++.+.  .+-|+||+.+.
T Consensus       176 ~liHgD~~~~Nvl~~~~~--~~~iID~~~~~  204 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGR--FSGFIDCGRLG  204 (255)
T ss_dssp             EEECSSCCGGGEEEETTE--EEEECCCTTCE
T ss_pred             eEEeCCCCCcceEEeCCc--eEEEEEchhcc
Confidence            479999999999998654  46799998764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.66  E-value=0.017  Score=45.57  Aligned_cols=28  Identities=18%  Similarity=0.271  Sum_probs=24.0

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      .++|+|++|.|||++.+.   ++|+||..+.
T Consensus       224 ~LiHGDl~~gNIlv~~~~---~~vID~E~a~  251 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE---TKVIDPEFAF  251 (392)
T ss_dssp             EEECSCCCGGGEEECSSC---EEECCCTTCE
T ss_pred             ceeccCCcCCceeEcCCc---eEEechhhcc
Confidence            479999999999998654   8999998765

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=93.22  E-value=0.014  Score=44.69  Aligned_cols=27  Identities=19%  Similarity=0.164  Sum_probs=22.4

Q ss_pred             ceEecCCCCCcEEEcCCCCCCEEEecCCCcc
Q 027327            2 QICHRDLKLENTLLDGSKAPRLKICDFGYSK   32 (225)
Q Consensus         2 ~ivHrdlkp~Nil~~~~~~~~vkl~Dfg~a~   32 (225)
                      ++||+|+.+.|||++++    ..++||+-+.
T Consensus       193 ~liHgDlh~~NvL~~~~----~~~IDFdd~~  219 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG----PMFVDLDDAR  219 (325)
T ss_dssp             EECCSSCSGGGEEESSS----EEECCCTTCC
T ss_pred             eeecCCCCcccEEEeCC----ceEEechhcc
Confidence            68999999999999632    4589999765

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=82.13  E-value=0.29  Score=38.03  Aligned_cols=15  Identities=47%  Similarity=0.773  Sum_probs=13.3

Q ss_pred             eEecCCCCCcEEEcC
Q 027327            3 ICHRDLKLENTLLDG   17 (225)
Q Consensus         3 ivHrdlkp~Nil~~~   17 (225)
                      ++|+|+.+.||++..
T Consensus       220 ~CHnDL~~~NiL~~~  234 (395)
T d1nw1a_         220 FCHNDLQEGNILLPK  234 (395)
T ss_dssp             EECSCCCGGGEEEEC
T ss_pred             EEecCCCcccEeecc
Confidence            579999999999864