BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027328
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80915|PR1B4_ARATH PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1
Length = 220
Score = 310 bits (793), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 180/208 (86%), Gaps = 2/208 (0%)
Query: 1 MTSASPPVLPISNSQPTTTASSASSVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAE 60
M S++PPVLPISN Q T +++ SSV+SQPP+ATPAFR IN I+++++ G ++RRPWAE
Sbjct: 1 MASSAPPVLPISNPQ-TVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAE 59
Query: 61 LADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASW 120
LADRSA SKPES S+A +RIRKNYSYF+VNYLTV ++ FSL+T+PFSL+ L+ LLASW
Sbjct: 60 LADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASW 119
Query: 121 IFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAH 180
+FLYLFRP+DQP+V+FGRTFS+RETLG LI+ SIFV FLT VGS+L+SA+M+G LICAH
Sbjct: 120 LFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAH 179
Query: 181 GAFRVPEDLFLDEQEPSASTGFLSFIGG 208
GAFR PEDLFLDEQEP A+TGFLSF+GG
Sbjct: 180 GAFRAPEDLFLDEQEP-AATGFLSFLGG 206
>sp|Q9M012|PR1B5_ARATH PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1
Length = 223
Score = 247 bits (631), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 161/210 (76%), Gaps = 8/210 (3%)
Query: 1 MTSASPPVLPISNSQPTTTASS---ASSVQSQPPVATPAFRALINHISDSLRYGFAQRRP 57
M S +PPVLPIS + TT + V+SQPPV RA +N +++++ G ++ RP
Sbjct: 1 MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPVV----RAFVNGVTETVCGGLSRSRP 56
Query: 58 WAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLL 117
W+EL DRSAF+KP+S SEA R RKN SYFRVNY+ +VA+++ FSL+ +PFSL++L+ L
Sbjct: 57 WSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLA 116
Query: 118 ASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLI 177
ASW+FLYLFRPSD+PL++FGR+FSE ETLG LI+ +I V F TSVGS+LISA+M+G I
Sbjct: 117 ASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATI 176
Query: 178 CAHGAFRVPEDLFLDEQEPSASTGFLSFIG 207
C HGAFR P+DLFLDEQ+ +AS GFLSFIG
Sbjct: 177 CVHGAFRAPDDLFLDEQDHAAS-GFLSFIG 205
>sp|Q9LYN0|PR1B1_ARATH PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1
Length = 209
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 159/203 (78%), Gaps = 10/203 (4%)
Query: 4 ASPPVLPISNSQPTTTASSASSVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAELAD 63
A+PP LP++N Q +VQSQPP+ TPAFR + +S S+R G +QRRPW EL D
Sbjct: 2 ATPPTLPVTNQQ---------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELID 52
Query: 64 RSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFL 123
RS+ ++PES ++A RIRKN +YF+VNY+ +V++V+AFSL ++P SLL+L+GLL W+FL
Sbjct: 53 RSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFL 112
Query: 124 YLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAF 183
YLFRPSDQPLVVFGRTFS+RETL L++ +I V F+TSVGS+L SA+M+G ++C HGAF
Sbjct: 113 YLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAF 172
Query: 184 RVPEDLFLDEQEPSASTGFLSFI 206
VP+DLFLDEQEP A+ G LSF+
Sbjct: 173 VVPDDLFLDEQEP-ANAGLLSFL 194
>sp|Q9FLB6|PR1B3_ARATH PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1
Length = 217
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 162/203 (79%), Gaps = 8/203 (3%)
Query: 4 ASPPVLPISNSQPTTTASSASSVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAELAD 63
A+PP LPIS+ S QSQ PV+TPAFR ++ +S S+R +QRRPW EL D
Sbjct: 3 ANPPTLPISDH-------SGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVD 55
Query: 64 RSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFL 123
RSA S+PES ++A RIR+N YF+VNY+T+V++V+A SL+++PFSLL+L+ L +WIFL
Sbjct: 56 RSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFL 115
Query: 124 YLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAF 183
YLFRPSDQPLVV GRTFS+RETLGVL++L+I V FLTSVGS+L SA+M+G G++C HGAF
Sbjct: 116 YLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAF 175
Query: 184 RVPEDLFLDEQEPSASTGFLSFI 206
RVPEDLFLD+QEP A+TG LSF+
Sbjct: 176 RVPEDLFLDDQEP-ANTGLLSFL 197
>sp|Q9SIY7|PR1B2_ARATH PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1
Length = 213
Score = 218 bits (554), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 160/206 (77%), Gaps = 9/206 (4%)
Query: 3 SASPPVLPISNSQPTTTASSASSVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAELA 62
S+SP +LP++N Q T QSQPP+ + AFR ++ +S SLR +QRRPW EL
Sbjct: 2 SSSPAILPVTNQQAAT--------QSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELV 53
Query: 63 DRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIF 122
DRS+F++P+S +++ RIRKN +YF+VNY +V++V+AFSL+++PFSLL+L+ LL SW+F
Sbjct: 54 DRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMF 113
Query: 123 LYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGA 182
LYLFR SDQPLV+FGR+FS+RETL L++ +I V F+TSVGS+L SA+ +G ++C HGA
Sbjct: 114 LYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGA 173
Query: 183 FRVPEDLFLDEQEPSASTGFLSFIGG 208
FRVP+DLFLDEQEP A+ G LSFIG
Sbjct: 174 FRVPDDLFLDEQEP-ANAGLLSFIGN 198
>sp|Q9LYQ4|PR1B6_ARATH PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1
Length = 216
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 120/149 (80%)
Query: 47 SLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITN 106
++R+ A RPWAEL DRSAFS+P S SEAT R+RKN+SYFR NY+T+VA+++A SL+T+
Sbjct: 36 TVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTH 95
Query: 107 PFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSIL 166
PF+L +L L ASW+FLY FRP+DQPLV+ GRTFS+ ETLG+L + ++ V F+TSVGS+L
Sbjct: 96 PFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLL 155
Query: 167 ISAVMVGAGLICAHGAFRVPEDLFLDEQE 195
+S + VG + HGAFR PEDLFL+EQE
Sbjct: 156 MSTLAVGIMGVAIHGAFRAPEDLFLEEQE 184
>sp|Q9LIC7|PR1F4_ARATH PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1
Length = 188
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 11 ISNSQPTTTASSASSVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKP 70
++N+ TT+S AS + ++ R ++ G A RR W + D + P
Sbjct: 1 MANNDEITTSSHASPAVNHESISRAKQR---------IKDGLATRRSWRVMFDLHSTGLP 51
Query: 71 ESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSD 130
S+ RI+ N +YFR NY V+ VI FSLI +P SL++ GL+ WIFLY R D
Sbjct: 52 HGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLR--D 109
Query: 131 QPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLF 190
PL VF +R L L V++I + LT+ +++A+M GA L+ H R +DLF
Sbjct: 110 VPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLF 169
Query: 191 LDEQEPSASTGFLS 204
LDE+ + T L+
Sbjct: 170 LDEEAATTETSGLT 183
>sp|Q9C889|PR1F2_ARATH PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1
Length = 189
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 41 INHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIA 100
I+ ++ G A RRPW + D + + P F +A RI+ N YFR NY V ++
Sbjct: 22 ISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILF 81
Query: 101 FSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLT 160
SL+ +P SL++L L+ WIFLY R D+PLVVFG +R L L VL++ + LT
Sbjct: 82 LSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLT 139
Query: 161 SVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSAS--TGFLSF 205
S ++ +++ A L+ H A R ++LFLDE+ + + +G +S+
Sbjct: 140 HATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSY 186
>sp|Q9FRR1|PRA1E_ARATH PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1
Length = 209
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
RPW E+ D SA S P + EA ++ N SYFR NY V ++ LI +P S++ +
Sbjct: 48 RPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIV 107
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ WI LY R ++ +V+ G+ ++ L +L ++++ T VG ++ ++++G
Sbjct: 108 VFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLL 167
Query: 176 LICAHGAFRVPEDLFLDEQ 194
++ AHGAFR +DLFLDE+
Sbjct: 168 IVGAHGAFRNTDDLFLDEE 186
>sp|Q9LIC6|PR1F3_ARATH PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1
Length = 188
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 48 LRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNP 107
++ G A RR W + D + P S+A RI+ N +YFR+NY VV +VI FSLI +P
Sbjct: 29 IKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHP 88
Query: 108 FSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILI 167
SL++ L+ WIFLY R D+P+ +F +R L VL VL++ + LT+ ++
Sbjct: 89 TSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIV 146
Query: 168 SAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLS 204
A++ GA L+ H R EDLFLDE+ + T L+
Sbjct: 147 GALVTGAVLVLIHSVVRKTEDLFLDEEAATTETSGLT 183
>sp|Q9FZ63|PR1F1_ARATH PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1
Length = 180
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 35 PAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTV 94
P + I+ R G A RRPW ++ D +F+ P + RIR N YF+ NY V
Sbjct: 16 PKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIV 75
Query: 95 VAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSI 154
V + SLI NPFSLL+L+ LL +W+FLY R D+PL VF R R L ++ V+++
Sbjct: 76 VLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLR--DEPLTVFDREIDHRIVLIIMSVITL 133
Query: 155 FVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPS 197
+ FLT + A++ GA + +H A R EDLF ++E S
Sbjct: 134 SILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETS 176
>sp|Q9FH16|PR1G2_ARATH PRA1 family protein G2 OS=Arabidopsis thaliana GN=PRA1G2 PE=2 SV=1
Length = 186
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 1 MTSASPPVLPISNSQPTTTASSASSVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAE 60
MT + PP+ IS PT S R++ N L + RPW+E
Sbjct: 1 MTPSPPPITYISIPLPTNDVVS---------------RSIHN-----LTTAISSHRPWSE 40
Query: 61 LADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLIT-NPFSLLMLVGLLAS 119
L FS PESFS LR + N++YF VNY +V+ AF+LIT +P +L+++ ++A
Sbjct: 41 LIFSGDFSLPESFSSLLLRSKTNFNYFFVNYTIIVSTCAAFALITASPVALIVVGAIIAL 100
Query: 120 WIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICA 179
W+ + FR + PL+++ +R L L++ S++ + T+ L V VG L
Sbjct: 101 WLIFHFFR--EDPLILWSFQVGDRTVLLFLVLASVWAIWFTNSAVNLAVGVSVGLLLCII 158
Query: 180 HGAFRVPEDLFLDEQE 195
H FR ++LFL+E +
Sbjct: 159 HAVFRNSDELFLEEDD 174
>sp|P93829|PRA1D_ARATH PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1
Length = 182
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
RPW + D SAFS P S ++AT R+ +N ++FR+NY ++++++ +LIT P ++L +
Sbjct: 21 RPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFIA 80
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ +W FLY R ++PL +FG T + +LI LSI T V ++ V G
Sbjct: 81 VGLAWFFLYFAR--EEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVGFGVL 138
Query: 176 LICAHGAFRVPEDLFLDEQE 195
++ H A R +DL D+ E
Sbjct: 139 VLILHAALRGTDDLVSDDLE 158
>sp|Q9ZWD1|PR1G1_ARATH PRA1 family protein G1 OS=Arabidopsis thaliana GN=PRA1G1 PE=2 SV=1
Length = 187
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 56 RPW-AELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLV 114
RPW +E + +P SFS A R++ N +F VNY+ + A I LI +P +L+ +
Sbjct: 38 RPWWSEFLAFGSIDRPSSFSPAVSRVKLNLHHFAVNYVLLTAASITLFLIGDPMALVTVA 97
Query: 115 GLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGA 174
+A W+ LY +R D PLV++GR S+R + LI+ S++ + + LI V+
Sbjct: 98 SFVAMWLLLYFYR--DHPLVLYGRHISDRVIVFGLILGSLWALWFINSLQCLILGVVTSV 155
Query: 175 GLICAHGAFRVPEDLFLDEQEPSASTGFLSF 205
L H R +DLF+ E++ + FL +
Sbjct: 156 LLCLVHAIIRNSDDLFVQEKDVVVPSNFLHW 186
>sp|Q9Z0S9|PRAF1_MOUSE Prenylated Rab acceptor protein 1 OS=Mus musculus GN=Rabac1 PE=1
SV=1
Length = 185
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
RPW D+ FS+P + E R+ +N Y++ NY+ V +I + ++T+P L+ L
Sbjct: 43 RPWGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAV 102
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ LYL R LV+FGR S + +S F+L GS + +
Sbjct: 103 FFGACYILYL-RTLQSKLVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLV 161
Query: 176 LICAHGAFRVPE 187
LI +H AF E
Sbjct: 162 LIGSHAAFHQME 173
>sp|Q9UI14|PRAF1_HUMAN Prenylated Rab acceptor protein 1 OS=Homo sapiens GN=RABAC1 PE=1
SV=1
Length = 185
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
RPW+ D+ FS+P + E R+ +N Y++ NY+ V +I + ++T+P L+ L
Sbjct: 43 RPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAV 102
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ LYL R + LV+FGR S + +S F+L GS + +
Sbjct: 103 FFGACYILYL-RTLESKLVLFGREVSPAHQYALAGGISFPFFWLAGAGSAVFWVLGATLV 161
Query: 176 LICAHGAFRVPE 187
+I +H AF E
Sbjct: 162 VIGSHAAFHQIE 173
>sp|O35394|PRAF1_RAT Prenylated Rab acceptor protein 1 OS=Rattus norvegicus GN=Rabac1
PE=1 SV=1
Length = 185
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
RPW D+ FS+P + E R+ +N Y++ NY+ V +I + ++T+P L+ L
Sbjct: 43 RPWGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAV 102
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ LYL R LV+FGR S + +S F+L GS + +
Sbjct: 103 FFGACYILYL-RTLQSKLVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLV 161
Query: 176 LICAHGAFRVPE 187
LI +H AF E
Sbjct: 162 LIGSHAAFHQIE 173
>sp|Q8HY39|PRAF1_CANFA Prenylated Rab acceptor protein 1 OS=Canis familiaris GN=RABAC1
PE=2 SV=1
Length = 185
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
RPW+ D+ FS+P + E R+ +N Y++ NY+ V +I + ++T+P L+ L
Sbjct: 43 RPWSSFVDQRRFSRPRNLGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAV 102
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ LYL R V+FGR S + +S F+L GS + +
Sbjct: 103 FFGACYILYL-RTLQSKFVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLV 161
Query: 176 LICAHGAFRVPE 187
+I +H AF E
Sbjct: 162 VIGSHAAFHQME 173
>sp|Q52NJ0|PRAF1_PIG Prenylated Rab acceptor protein 1 OS=Sus scrofa GN=RABAC1 PE=2 SV=1
Length = 185
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
RPW D+ FS+P + E R+ +N Y++ NY+ V +I + ++T+P L+ L
Sbjct: 43 RPWGSFVDQRRFSRPRNLGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAV 102
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ LYL R V+FGR S + +S F+L GS + +
Sbjct: 103 FFGACYILYL-RTLQSKFVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLV 161
Query: 176 LICAHGAFRVPE 187
+I +H AF E
Sbjct: 162 VIGSHAAFHQIE 173
>sp|Q1RMH4|PRAF1_BOVIN Prenylated Rab acceptor protein 1 OS=Bos taurus GN=RABAC1 PE=2 SV=1
Length = 185
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVG 115
R W D+ FS+P + E R+ +N Y++ NY+ V +I + + T+P L+ L
Sbjct: 43 RSWGSFVDQRRFSRPRNLGELCQRLVRNVEYYQSNYVFVFLGLILYCVATSPMLLVALAV 102
Query: 116 LLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAG 175
+ LYL R V+FGR S + +S F+L GS + +
Sbjct: 103 FFGACYILYL-RTLQSKFVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLV 161
Query: 176 LICAHGAFRVPE 187
+I +H AF E
Sbjct: 162 VIGSHAAFHQIE 173
>sp|Q9UUN5|PRA1_SCHPO PRA1-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPCC306.02c PE=2 SV=1
Length = 171
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 41 INHISDSLRYGFAQRRPW-------AELADRSAFSKPESFSEATLRIRKNYSYFRVNYLT 93
I +S++ +A R + E D S+P +FSEA RI N+S F NYL
Sbjct: 8 ITKVSETFSEIYASRAQYLSGFKSVGEFLDVRRISRPRNFSEAQSRISFNFSRFSSNYLA 67
Query: 94 VVAVVIAFSLITNP 107
++A+++ ++LI NP
Sbjct: 68 IIAMLVIYALIRNP 81
>sp|Q1G3K7|PRA1C_ARATH PRA1 family protein C OS=Arabidopsis thaliana GN=PRA1C PE=2 SV=1
Length = 127
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 87 FRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETL 146
FR NY+ + V I S++ P L + V L+ +W LY++ ++P V+FG + +
Sbjct: 3 FRTNYIVIFIVSIFISMLWQPVHLSVFVILIVAW--LYVYSRDNEPWVIFGSVIDDSTLV 60
Query: 147 GVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRV-PEDLFL--DEQEPSA 198
VL+VL+I +F LT V ++ V+ G ++ HG R E LF+ D++E A
Sbjct: 61 LVLLVLTIGIFLLTDVSRGIVIGVLAGLPVVLVHGMCRRNTEMLFVLEDDEEKVA 115
>sp|Q8LFP1|PRA1H_ARATH PRA1 family protein H OS=Arabidopsis thaliana GN=PRA1H PE=2 SV=1
Length = 241
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 57 PWAE--LADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLV 114
PW + + ++S P S +A +R+ +N F NY T+ V A +L P +L+ L+
Sbjct: 103 PWTTGFIGNCDSYSFPSSSQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLL 162
Query: 115 GLLASW-IFLYLFRPSDQPLVVFGRTFSERE-TLGVLIVLSIFVFFLTSVGSILISAVMV 172
G LA W +F Y SD+ F R S R+ ++G+ + + +V L SA+ +
Sbjct: 163 GSLALWELFKYC---SDK--WKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAI 217
Query: 173 GAGLICAHGAFR 184
++ H FR
Sbjct: 218 SYSVMILHAGFR 229
>sp|Q8W115|PR1A3_ARATH PRA1 family protein A3 OS=Arabidopsis thaliana GN=PRA1A3 PE=2 SV=1
Length = 209
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 56 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLL 111
R AE R AF P SFS+ R++ N Y+R NY + V+ +LIT P ++L
Sbjct: 25 RSLAEFFSRFAF--PRSFSKWMSRLKCNLYYYRTNYFILFVFVLGLALITRPLAIL 78
>sp|Q8GWC3|PR1A2_ARATH PRA1 family protein A2 OS=Arabidopsis thaliana GN=PRA1A2 PE=2 SV=1
Length = 209
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 65 SAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLL 111
S F+ P SFS+ R++ N Y+R NY +V V+ +L+T P +L+
Sbjct: 32 SRFAFPRSFSKWKSRLKCNLYYYRTNYFILVIFVLGLALVTRPLALV 78
>sp|Q54NS7|PRAFB_DICDI PRA1 family protein 2 OS=Dictyostelium discoideum GN=prafB PE=3
SV=2
Length = 158
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 54 QRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLML 113
+ +PW + + +S P S A R+ N +++ NY+ +VAVV+ +L TN L+ +
Sbjct: 8 KLQPWNDFIEWGRYSIPGS-QNAITRMEDNLNFYSGNYIAIVAVVLLITLFTNMNLLVAI 66
Query: 114 VGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVG 173
+ L A +L+ + D+ + + + +L V+S+ V + S G L +V
Sbjct: 67 LLLGAIGYYLFFVQKGDKNIGF--AVLTPMIQMVILGVVSVIVIYKLS-GLTLFYTTLVS 123
Query: 174 AGLICAHGAFRV 185
+ AH A ++
Sbjct: 124 LLFVLAHSALKM 135
>sp|Q8SW90|Y2E7_ENCCU Uncharacterized membrane protein ECU02_1470 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU02_1470 PE=1 SV=1
Length = 156
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 70 PESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPF--SLLMLVGLLASWIFLYLFR 127
P++ ++A R+ N F+ +YL + A+ F+LI + L++L+G++A+ ++ Y R
Sbjct: 37 PQNLNDAKRRVFANLDRFKFHYLAMTAI---FTLIYVLYRLELIILIGIVAAGVYAYRVR 93
Query: 128 PSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVG 173
P+ + + R+ +G+LI F+FF ++ +L + + G
Sbjct: 94 PTVCNIELEPRSVCIAGFVGILI---FFIFFKEAIVGLLAISALCG 136
>sp|Q54XK1|PRAFA_DICDI PRA1 family protein 1 OS=Dictyostelium discoideum GN=prafA PE=3
SV=1
Length = 235
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 23 ASSVQSQPPVATPAFRALINHISDSLRYGFAQRRPWAE-LADRSAFSKPESFSEATLRIR 81
A+ + +P + A+ + I + + R W + R + P + + T RI+
Sbjct: 68 ANGISLEPSSISHRVNAITSKIKEFKQERMETTRDWRSFVGSRQQYGLP-NIKDTTSRIK 126
Query: 82 KNYSYFRVNYLTVVAVVIAFSLITNPF 108
+N YF+ NYL + F +ITNPF
Sbjct: 127 ENVVYFQSNYLILFLCFSVFFIITNPF 153
>sp|Q9LZM7|PR1A1_ARATH PRA1 family protein A1 OS=Arabidopsis thaliana GN=PRA1A1 PE=2 SV=1
Length = 209
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 65 SAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
S F+ P+S + R++ N Y+R NY ++ V++ ++T P ++
Sbjct: 32 SRFTVPKSVPKWDSRLKCNLYYYRTNYFIMIVVILGLGVLTRPLAI 77
>sp|Q8R5J9|PRAF3_MOUSE PRA1 family protein 3 OS=Mus musculus GN=Arl6ip5 PE=1 SV=2
Length = 188
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 56 RPWAEL---ADRSAFSKPE--SFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
R W + +DR F++P+ S+ R+ N Y++ NYL V A++I+ +PF++
Sbjct: 9 RAWDDFFPGSDR--FARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISVVGFLSPFNM 66
Query: 111 LMLVGLLASWIFL-YLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILI 167
+ L G++ +F+ +++ ++ + R + T V++V+ F ++ G +++
Sbjct: 67 I-LGGVIVVLVFMGFVWAAHNKD--ILRRMKKQYPTAFVMVVMLASYFLISMFGGVMV 121
>sp|P53633|PRA1_YEAST Prenylated Rab acceptor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YIP3 PE=1 SV=2
Length = 176
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 46 DSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVV 98
SL+ A R E + SKP++F E R+ N YF NY ++ +
Sbjct: 27 QSLQSKLATLRTPQEFFNFKKISKPQNFGEVQSRVAYNLKYFSSNYGLIIGCL 79
>sp|Q5R4X8|PRAF3_PONAB PRA1 family protein 3 OS=Pongo abelii GN=ARL6IP5 PE=2 SV=1
Length = 188
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 56 RPWAEL---ADRSAFSKPE--SFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
R W + +DR F++P+ S+ R+ N Y++ NYL V A++I+ +PF++
Sbjct: 9 RAWDDFFPGSDR--FARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISIVGFLSPFNM 66
Query: 111 LM 112
++
Sbjct: 67 IL 68
>sp|O75915|PRAF3_HUMAN PRA1 family protein 3 OS=Homo sapiens GN=ARL6IP5 PE=1 SV=1
Length = 188
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 56 RPWAEL---ADRSAFSKPE--SFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
R W + +DR F++P+ S+ R+ N Y++ NYL V A++I+ +PF++
Sbjct: 9 RAWDDFFPGSDR--FARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISIVGFLSPFNM 66
Query: 111 LM 112
++
Sbjct: 67 IL 68
>sp|Q9ES40|PRAF3_RAT PRA1 family protein 3 OS=Rattus norvegicus GN=Arl6ip5 PE=1 SV=1
Length = 188
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 56 RPWAEL---ADRSAFSKPE--SFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
R W + +DR F++P+ S+ R+ N Y++ NYL V A++I+ +PF++
Sbjct: 9 RAWDDFFPGSDR--FARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISVVGFLSPFNM 66
Query: 111 LM 112
++
Sbjct: 67 IL 68
>sp|Q56P28|PRAF3_PIG PRA1 family protein 3 OS=Sus scrofa GN=ARL6IP5 PE=2 SV=1
Length = 188
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 56 RPWAEL---ADRSAFSKPE--SFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
R W + +DR F++P+ S+ R+ N Y++ NYL V A++I+ +PF++
Sbjct: 9 RAWDDFFPGSDR--FARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISVVGFLSPFNM 66
Query: 111 LM 112
++
Sbjct: 67 IL 68
>sp|Q5E9M1|PRAF3_BOVIN PRA1 family protein 3 OS=Bos taurus GN=ARL6IP5 PE=2 SV=1
Length = 188
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 56 RPWAEL---ADRSAFSKPE--SFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
R W + +DR F++P+ S+ R+ N Y++ NYL V A++I+ +PF++
Sbjct: 9 RAWDDFFPGSDR--FARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISVVGFLSPFNM 66
Query: 111 LM 112
++
Sbjct: 67 IL 68
>sp|Q4R4R4|PRAF3_MACFA PRA1 family protein 3 OS=Macaca fascicularis GN=ARL6IP5 PE=2 SV=1
Length = 188
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 56 RPWAEL---ADRSAFSKPE--SFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSL 110
R W + +DR F++P+ S+ R+ N Y++ NYL V A++I+ +PF++
Sbjct: 9 RAWDDFFPGSDR--FAQPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISVVGFLSPFNM 66
Query: 111 LM 112
++
Sbjct: 67 IL 68
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,691,917
Number of Sequences: 539616
Number of extensions: 2750337
Number of successful extensions: 10972
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 10901
Number of HSP's gapped (non-prelim): 62
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)