Query 027329
Match_columns 225
No_of_seqs 136 out of 709
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 13:35:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027329.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027329hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z3q_A Thaumatin-like protein; 100.0 6E-88 2.1E-92 574.9 14.6 200 25-225 1-200 (200)
2 1aun_A PR-5D; antifungal prote 100.0 4.9E-87 1.7E-91 572.5 14.9 202 24-225 1-206 (208)
3 1du5_A Zeamatin; beta sandwich 100.0 1.7E-86 5.8E-91 568.5 12.4 201 25-225 1-206 (206)
4 2vhk_A Thaumatin-I; kinetics o 100.0 4.8E-85 1.7E-89 559.2 15.2 198 25-225 1-205 (206)
5 2ahn_A Thaumatin-like protein; 100.0 1.7E-83 5.7E-88 555.9 14.2 200 25-225 1-222 (222)
6 3g7m_A Xylanase inhibitor TL-X 100.0 2.6E-55 9E-60 359.2 13.4 143 25-225 1-151 (151)
7 3gd0_A Laminaripentaose-produc 91.1 0.27 9.3E-06 45.0 5.5 104 21-136 3-147 (367)
8 3gd0_A Laminaripentaose-produc 69.4 5 0.00017 36.6 4.7 41 185-225 320-365 (367)
9 4aor_D Trypsin inhibitor 3; hy 67.8 1.8 6.1E-05 26.3 0.9 15 167-181 10-24 (37)
10 1z8r_A Coxsackievirus B4 polyp 39.3 17 0.00059 29.5 2.6 18 80-97 117-134 (166)
11 2hrv_A 2A cysteine proteinase; 38.9 8.9 0.00031 30.5 0.8 18 80-97 97-114 (142)
12 4ep8_B Urease subunit beta; al 35.7 52 0.0018 24.6 4.5 50 20-70 17-92 (101)
13 3qbt_B Inositol polyphosphate 32.4 54 0.0019 25.1 4.5 37 23-60 45-97 (140)
14 1lm8_V VHL, VON hippel-lindau 31.6 62 0.0021 26.0 4.7 38 21-58 15-57 (160)
15 4ajy_V VON hippel-lindau disea 31.2 63 0.0022 26.1 4.7 38 21-58 18-60 (163)
16 4ubp_B Protein (urease (chain 27.0 92 0.0031 24.1 4.8 50 20-70 23-98 (126)
17 4ac7_B Urease subunit beta; hy 27.0 92 0.0031 24.1 4.8 50 20-70 23-98 (126)
No 1
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=6e-88 Score=574.89 Aligned_cols=200 Identities=79% Similarity=1.518 Sum_probs=194.6
Q ss_pred eEEEEEcCCCCceeeeeeCCCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCCCceecccCCCCCcc
Q 027329 25 ATFEIRNNCPFTVWAAAVPGGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQAYGAPPNT 104 (225)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~p~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCgg~~~C~~~g~~paT 104 (225)
++|||+|||+|||||+++|++||+|+|||++++.+|++|++|||||||+|+||+.|+++|+||||+|.++|++.|+||+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaT 80 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNT 80 (200)
T ss_dssp CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcc
Confidence 48999999999999999999999999999999999999977999999999999999999999999999999998899999
Q ss_pred eeeeeeccCCCcceeeecccCCcCCceeeeecCCCccccccccccccCCCCCCCCCCCCccCCccccCCCccccCCCCCC
Q 027329 105 LAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGIRCRGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCNSGKCV 184 (225)
Q Consensus 105 laEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~C~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~CC~g~~C~ 184 (225)
||||+|++.+++|||||||||||||||+|+|+++ .|+.++|.+|||..||.|||+++||+|+|++|++|||||+|.+|+
T Consensus 81 LaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g-~C~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g~~C~ 159 (200)
T 1z3q_A 81 LAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSG-GCRGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSGACS 159 (200)
T ss_dssp EEEEEEEETTTEEEEEEECTTCBSSCEEEEESSS-SSCCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTTSCCC
T ss_pred eEEEEecCCCCCceeeeeeeccccCCeeeeeCCC-CCCccccccchhhhCCHHHcccCcccCcccccCCCcccCCCCCCC
Confidence 9999999877899999999999999999999875 499999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHhhCCcccCCCCCCCCCceeeCCCCceEEEecC
Q 027329 185 PTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFCP 225 (225)
Q Consensus 185 pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~~~y~ItFCP 225 (225)
|++||++||++||+||||||||++|+|+|+++++|+|||||
T Consensus 160 pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 160 PTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp CCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred chhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 99999999999999999999999999999988999999998
No 2
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=4.9e-87 Score=572.52 Aligned_cols=202 Identities=64% Similarity=1.341 Sum_probs=194.8
Q ss_pred ceEEEEEcCCCCceeeeeeC-CCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCCCceecccCCCCC
Q 027329 24 GATFEIRNNCPFTVWAAAVP-GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQAYGAPP 102 (225)
Q Consensus 24 a~t~tv~N~C~~tVwp~~~p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCgg~~~C~~~g~~p 102 (225)
+++|||+|||+|||||+++| ++||+|+|||++++.+|++|++|||||||+|+||+.|+++|+||||+|.++|++.|+||
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p~~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pP 80 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPP 80 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSS
T ss_pred CcEEEEEeCCCCCcCCeEecCCCCeeCCCCCeEEEECCCCCcccceecccccCCCCCCCcccccCCcCceeecCCCCCCC
Confidence 46999999999999999998 78999999999999999999779999999999999999999999999999999988999
Q ss_pred cceeeeeeccCCCcceeeecccCCcCCceeeeecC--CCccccccccccccCCCCCCCCCCCCccCCccccCCCccccCC
Q 027329 103 NTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLS--GIRCRGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCNS 180 (225)
Q Consensus 103 aTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~--~~~C~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~CC~g 180 (225)
+|||||+|++.+++|||||||||||||||+|+|++ ++.|+.++|.+|||..||.|||+++||+|||++|++|||||+|
T Consensus 81 aTLaEftl~~~~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C~~~~C~~dln~~CP~~L~v~~~C~saC~af~~~~yCC~g 160 (208)
T 1aun_A 81 NTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQ 160 (208)
T ss_dssp CCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCTT
T ss_pred cceEEEEecCCCCCceeeeecccCcccCeeeeeCCCCCCCCCcccccCcchhhCCHHHcccccccCHhhhcCCCcccccC
Confidence 99999999987789999999999999999999985 3459999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHhhCCcccCCCCCCCCCceeeCC-CCceEEEecC
Q 027329 181 GKCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPG-GTNYKVTFCP 225 (225)
Q Consensus 181 ~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~~y~ItFCP 225 (225)
.+|+|++||++||++||+||||||||++|||+|++ +++|+|||||
T Consensus 161 ~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP 206 (208)
T 1aun_A 161 GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 206 (208)
T ss_dssp SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred CCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCC
Confidence 99999999999999999999999999999999998 8999999998
No 3
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=1.7e-86 Score=568.46 Aligned_cols=201 Identities=67% Similarity=1.340 Sum_probs=193.6
Q ss_pred eEEEEEcCCCCceeeeeeC-CCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCCCceecccCCCCCc
Q 027329 25 ATFEIRNNCPFTVWAAAVP-GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQAYGAPPN 103 (225)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCgg~~~C~~~g~~pa 103 (225)
++|||+|||+|||||+++| ++||+|+|||++++.+|++||+|||||||+|+||++|+++|+||||+|.++|++.|.||+
T Consensus 1 ~tfti~N~C~~tVWp~~~p~~gG~~L~~G~s~s~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPa 80 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPN 80 (206)
T ss_dssp CEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCTTBSSCCSCCCSSC
T ss_pred CEEEEEeCCCCCcCCeEecCCCCEecCCCCeEEEECCCCCcccceecccccCCCCCCCccccccCCCCeeecCCCCCCcc
Confidence 4899999999999999998 789999999999999999944899999999999999999999999999999999889999
Q ss_pred ceeeeeeccCCCcceeeecccCCcCCceeeeecCCCcc-ccccccccccCCCCCCCCCCCCccCCccccCCCccccCCC-
Q 027329 104 TLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGIRC-RGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYCCNSG- 181 (225)
Q Consensus 104 TlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~C-~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~CC~g~- 181 (225)
|||||+|++.+++|||||||||||||||+|+|++++.| +.++|.+|||..||.|||+++||+|+|++|++|||||+|.
T Consensus 81 TLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~C~~~~~C~~dln~~CP~~L~v~~gC~saC~~f~~~~yCC~g~~ 160 (206)
T 1du5_A 81 TLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSA 160 (206)
T ss_dssp CEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSSSCCCCCEECSCTTTTCCGGGEETTEECCHHHHHCCHHHHCCGGG
T ss_pred eeeEEEeccCCCCceeeeeeecccccCEEEecCCCCCCcCCCcccccchhhCCHHHhhccccCChhhccCCCcccccCCC
Confidence 99999999877899999999999999999999976469 9999999999999999999999999999999999999997
Q ss_pred --CCCCchhHHHHHhhCCcccCCCCCCCCCceeeCCCCceEEEecC
Q 027329 182 --KCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFCP 225 (225)
Q Consensus 182 --~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~~~y~ItFCP 225 (225)
+|+|++||++||++||+||||||||++|||+|+++++|+|||||
T Consensus 161 ~~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 161 ANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp GGGCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred CCcCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999999999999999999998999999998
No 4
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=4.8e-85 Score=559.18 Aligned_cols=198 Identities=62% Similarity=1.301 Sum_probs=189.7
Q ss_pred eEEEEEcCCCCceeeeee------CCCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCCCceecccC
Q 027329 25 ATFEIRNNCPFTVWAAAV------PGGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCNGLLQCQAY 98 (225)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~------p~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCgg~~~C~~~ 98 (225)
++|||+|||+|||||+++ |++||+|+|||++++.+|++||+|||||||+|+||+.|+++|+||||+|.++|++.
T Consensus 1 ~tfti~N~C~~tVWp~~~~g~~~l~~gG~~L~~G~s~~~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~ 80 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRF 80 (206)
T ss_dssp CEEEEEECSSSCEEEEEECSSSEEEEEEEEECTTCEEEEECCTTCCSEEEEEEBSCEECTTSBEECSBSCCTTBSSCSSC
T ss_pred CEEEEEeCCCCCcCCEEcCCCCcCCCCCeecCCCCEEEEECCCCCcccceeccccCCCCCCCCcccccCCCCceeecCCC
Confidence 489999999999999998 56899999999999999999448999999999999999999999999999999998
Q ss_pred CCCCcceeeeeeccCCCcceeeecccCCcCCceeeeecCCCccccccccccccCCCCCCCCCCC-CccCCccccCCCccc
Q 027329 99 GAPPNTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSGIRCRGIRCAADITGQCPNELRAPG-GCNNPCTVFKTDQYC 177 (225)
Q Consensus 99 g~~paTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~C~~~~C~~dl~~~CP~~l~~~~-gC~SaC~~~~~~~~C 177 (225)
|+||+|||||+|++.++ |||||||||||||||+|+|+++ .|+.++|.+|||..||.|||+++ ||+|+|++|++||||
T Consensus 81 g~pPaTLaEftl~~~~~-dfYDVSlVDGfNlP~~i~p~~g-~C~~~~C~~dln~~CP~eL~v~~~~C~saC~af~~~~yC 158 (206)
T 2vhk_A 81 GRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMNFSPTTR-GCRGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYC 158 (206)
T ss_dssp CCSSCCEEEEEEEETTE-EEEEEECTTCBSSCEEEEESSS-SCCCEEECSCHHHHCCGGGBCTTSSBCCHHHHHCCHHHH
T ss_pred CCCCcceEEEEeccCCC-ceeeeeccCCccCCEEeeeCCC-CCCccccccchhhhCCHHHeeccccccChhhccCCCccc
Confidence 89999999999997656 9999999999999999999875 49999999999999999999987 999999999999999
Q ss_pred cCCCCCCCchhHHHHHhhCCcccCCCCCCCCCceeeCCCCceEEEecC
Q 027329 178 CNSGKCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFCP 225 (225)
Q Consensus 178 C~g~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~~~y~ItFCP 225 (225)
|+|.+|+|++||++||++||+||||||||++| |+|+++++|+|||||
T Consensus 159 C~g~~C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP 205 (206)
T 2vhk_A 159 CTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCP 205 (206)
T ss_dssp TTTSCCCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESC
T ss_pred ccCCCCCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCC
Confidence 99999999999999999999999999999999 999998999999998
No 5
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=1.7e-83 Score=555.87 Aligned_cols=200 Identities=44% Similarity=0.948 Sum_probs=190.3
Q ss_pred eEEEEEcCCCCceeeeeeC--------CCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCCC-Cceec
Q 027329 25 ATFEIRNNCPFTVWAAAVP--------GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDCN-GLLQC 95 (225)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~p--------~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdCg-g~~~C 95 (225)
++|||+|+|+|||||++++ ++||+|+|||++++.+|++| +|||||||+|+||+.|+++|+||||+ |.++|
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~W-sGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C 79 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPW-NGRFWARTGCSTDASGKFVCATADCASGQVMC 79 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSE-EEEEEEEEEEEECTTSCEEEEESCCCSSSSSC
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCc-ceeEEeccccCCCCCCCcccccCCccCCceec
Confidence 5899999999999999974 57999999999999999999 89999999999999999999999999 99999
Q ss_pred cc-CCCCCcceeeeeeccCCCcceeeecccCCcCCceeeeecCC-CccccccccccccCCCCCCCCCC---C---CccCC
Q 027329 96 QA-YGAPPNTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPLSG-IRCRGIRCAADITGQCPNELRAP---G---GCNNP 167 (225)
Q Consensus 96 ~~-~g~~paTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~-~~C~~~~C~~dl~~~CP~~l~~~---~---gC~Sa 167 (225)
++ .+.||+|||||+|++.+++|||||||||||||||+|+|+++ +.|+.++|.+|||..||.|||++ + ||+|+
T Consensus 80 ~g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~sa 159 (222)
T 2ahn_A 80 NGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSA 159 (222)
T ss_dssp TTCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCH
T ss_pred CCCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEeccccc
Confidence 98 66999999999999877899999999999999999999874 35999999999999999999984 2 79999
Q ss_pred ccccCCCccccCCC-----CCCCchhHHHHHhhCCcccCCCCCCCCCceeeCCCCceEEEecC
Q 027329 168 CTVFKTDQYCCNSG-----KCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTNYKVTFCP 225 (225)
Q Consensus 168 C~~~~~~~~CC~g~-----~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~~~y~ItFCP 225 (225)
|.+|++|||||+|. +|+|++||++||++||+||||||||++|||+|+++++|+|||||
T Consensus 160 C~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 160 CVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp HHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred ccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999996 99999999999999999999999999999999998899999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=2.6e-55 Score=359.19 Aligned_cols=143 Identities=36% Similarity=0.788 Sum_probs=130.4
Q ss_pred eEEEEEcCCCCceeeeee----C-CCceeecCCCeEEEEcCCCCccceeeeecccccCCCCCcccccCCC-CCceecccC
Q 027329 25 ATFEIRNNCPFTVWAAAV----P-GGGRQLIRGQTWTINVNPGTKQARIWARTKCTFNAEGRGRCETGDC-NGLLQCQAY 98 (225)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~----p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgCs~~~~g~~~C~TGdC-gg~~~C~~~ 98 (225)
++|||+|||+|||||+++ | ++||+|+|||++++.+|++| +|||||||+|+||+.|+++|+|||| +|+++|++.
T Consensus 1 ~tfti~N~C~~tVWp~~~~~~~p~~gG~~L~~g~s~~~~~p~~w-sGRiWgRTgC~fd~~g~~~C~TGdCg~g~l~C~~~ 79 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALVLAQGGGGTELHPGASWSLDTPVIG-SQYIWGRTGCSFDRAGKGRCQTGDCGGSSLTCGGN 79 (151)
T ss_dssp CCEEEEECSSSCEEEEEEETTSSCCEECCBCTTCEEEECCCSSE-EEEEEEEESCEECSSCCEECSBSCSSTTSCCSCSC
T ss_pred CEEEEEeCCCCCccCeeccCCCCCCCCeEcCCCCeEEEECCCCC-cceeecccCCCCCCCCCcccccCCccCCcccccCC
Confidence 479999999999999998 6 68999999999999999999 7999999999999999999999999 699999998
Q ss_pred CCCCcceeeeeeccCCCcceeeeccc-CCcCCceeeeecCCCccccccccccccCCCCCCCCCCCCccCCccccCCCccc
Q 027329 99 GAPPNTLAEYTLNQFNNLDFYDISLV-DGFNVPMDFSPLSGIRCRGIRCAADITGQCPNELRAPGGCNNPCTVFKTDQYC 177 (225)
Q Consensus 99 g~~paTlaEftl~~~~~~d~YDVSlV-dG~NlP~~i~p~~~~~C~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~C 177 (225)
|+||+|||||+|+ +++|||||||| |||||||+|+|+++. ...|.+
T Consensus 80 g~pPaTlaEftl~--~~~d~YDVSlV~dG~NlP~~i~P~~g~---~~~C~~----------------------------- 125 (151)
T 3g7m_A 80 PAVPTTMAEVSVL--QGNYTYGVTSTLKGFNVPMNLKCSSGD---ALPCRK----------------------------- 125 (151)
T ss_dssp CCSSCCEEEEEEC--SSEEEEEEESSSSCCSSCEEEEESSSC---CEEECS-----------------------------
T ss_pred CCCCceeEEEEcc--CCCceEEEEeccCCCCCCeEEEeCCCC---cCcCCC-----------------------------
Confidence 8999999999998 37999999999 999999999999864 233332
Q ss_pred cCCCCCCCchhHHHHHhhCCcccCCCCCCCCCceeeCCCCc-eEEEecC
Q 027329 178 CNSGKCVPTNFSKFFKQRCPNAYSYPKDDQTSTFTCPGGTN-YKVTFCP 225 (225)
Q Consensus 178 C~g~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~~~-y~ItFCP 225 (225)
..||+||.|+ +.|+...+ |+|||||
T Consensus 126 ----------------~gC~dAy~~p-------~aC~~~~~~~~vtFCp 151 (151)
T 3g7m_A 126 ----------------AGCDVVQPYA-------KSCSAAGSRLQIVFCP 151 (151)
T ss_dssp ----------------TTCCSSSCCE-------EEEECTTCCEEEEECC
T ss_pred ----------------CCCCccccCC-------CcCCCCCCceEEEeCC
Confidence 3699999888 79999887 9999998
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=91.07 E-value=0.27 Score=44.97 Aligned_cols=104 Identities=24% Similarity=0.236 Sum_probs=62.9
Q ss_pred cccceEEEEEcCCCC--ceeeeee---C----------C----------C--------ceee-cCCCeEEEEcCCCCccc
Q 027329 21 STHGATFEIRNNCPF--TVWAAAV---P----------G----------G--------GRQL-IRGQTWTINVNPGTKQA 66 (225)
Q Consensus 21 ~a~a~t~tv~N~C~~--tVwp~~~---p----------~----------~--------g~~L-~~G~s~s~~~p~~w~sG 66 (225)
....-.|+|+||=.. .||..++ + + . ...| .+|++.+++||. . +|
T Consensus 3 ~~~tlpl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~~~G~s~ti~iP~-~-sG 80 (367)
T 3gd0_A 3 VPATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGPAPGRSTTIQIPK-F-SG 80 (367)
T ss_dssp CCSEEEEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECCCTTCEEEEEEES-E-EE
T ss_pred CCCceeEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECCCCCCceEEEccC-c-Cc
Confidence 344678999999974 5886652 1 0 0 1233 257889999998 5 89
Q ss_pred eeeeecccccCCCCCcccccCCCCCceeccc-C--CCCC----cceeeeeeccCCCcceeeecccCCcCCceeeeec
Q 027329 67 RIWARTKCTFNAEGRGRCETGDCNGLLQCQA-Y--GAPP----NTLAEYTLNQFNNLDFYDISLVDGFNVPMDFSPL 136 (225)
Q Consensus 67 riw~RtgCs~~~~g~~~C~TGdCgg~~~C~~-~--g~~p----aTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~ 136 (225)
|||=..|= .=.|.=..| |..+ .. . .-|. -.-+|||++. ..-|-++|.||-|.+||.|+-.
T Consensus 81 RIyfS~g~----~L~f~~~~~---glv~-Ps~~NpsDPN~~~~~~f~EfT~n~--~gl~~N~S~VD~~~~Pl~l~l~ 147 (367)
T 3gd0_A 81 RIYFSYGR----KMEFRLTTG---GLVQ-PAVQNPTDPNRDILFNWSEYTLND--SGLWINSTQVDMFSAPYTVGVR 147 (367)
T ss_dssp EEEEEESS----CCCCEEETT---EECC-CCTTSTTCTTTTSCEEEEEEEEET--TEEEEECCCSSEECSCEEEEEE
T ss_pred eEEEEcCC----ccEEEecCC---CccC-CCCCCCCCCCCCceeeEEEEEecC--cceecccceeccccCceEEEEE
Confidence 99944321 011222222 1111 11 0 0111 2348999994 5688999999999999999643
No 8
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=69.44 E-value=5 Score=36.61 Aligned_cols=41 Identities=17% Similarity=0.299 Sum_probs=30.6
Q ss_pred CchhHHHHHhhCC--cccCCCCCCCC---CceeeCCCCceEEEecC
Q 027329 185 PTNFSKFFKQRCP--NAYSYPKDDQT---STFTCPGGTNYKVTFCP 225 (225)
Q Consensus 185 pt~ys~~fK~~CP--~AYsya~Dd~t---stftC~~~~~y~ItFCP 225 (225)
.+.|++++++.=. .+|.|||||-. ++..=.+....+||+-|
T Consensus 320 tNhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 320 TNHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp SCHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred ccHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 3579999999955 68999999743 45555556778888644
No 9
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=67.76 E-value=1.8 Score=26.34 Aligned_cols=15 Identities=27% Similarity=0.826 Sum_probs=12.5
Q ss_pred CccccCCCccccCCC
Q 027329 167 PCTVFKTDQYCCNSG 181 (225)
Q Consensus 167 aC~~~~~~~~CC~g~ 181 (225)
-|..|+.++|||+|.
T Consensus 10 ic~~f~~p~~ccsg~ 24 (37)
T 4aor_D 10 ICSGFGPPEQCCSGA 24 (37)
T ss_dssp EECTTSCGGGBTTSC
T ss_pred ccCCCCCcccccccc
Confidence 366789999999985
No 10
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=39.30 E-value=17 Score=29.53 Aligned_cols=18 Identities=39% Similarity=0.870 Sum_probs=15.5
Q ss_pred CCcccccCCCCCceeccc
Q 027329 80 GRGRCETGDCNGLLQCQA 97 (225)
Q Consensus 80 g~~~C~TGdCgg~~~C~~ 97 (225)
|.+.|+-|||||.|.|..
T Consensus 117 ~~G~~epGDCGG~L~C~H 134 (166)
T 1z8r_A 117 ATGFSEPGDAGGILRCEH 134 (166)
T ss_dssp EECSSSCCCCBSEEECSS
T ss_pred EecCCCCCCCCceeeeCC
Confidence 457899999999999973
No 11
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=38.89 E-value=8.9 Score=30.47 Aligned_cols=18 Identities=56% Similarity=1.298 Sum_probs=15.4
Q ss_pred CCcccccCCCCCceeccc
Q 027329 80 GRGRCETGDCNGLLQCQA 97 (225)
Q Consensus 80 g~~~C~TGdCgg~~~C~~ 97 (225)
|.+.|+-|||||.|.|..
T Consensus 97 g~G~~epGDCGG~L~C~H 114 (142)
T 2hrv_A 97 GEGPCEPGDCGGKLLCKH 114 (142)
T ss_dssp EECCCCTTCTTCEEEETT
T ss_pred EEcCCCCCCCCceeeeCC
Confidence 457899999999999973
No 12
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=35.74 E-value=52 Score=24.58 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=35.2
Q ss_pred ccccceEEEEEcCCCCceeeeee------------------------C-CCceeecCCCeEEEEcCC-CCccceeee
Q 027329 20 TSTHGATFEIRNNCPFTVWAAAV------------------------P-GGGRQLIRGQTWTINVNP-GTKQARIWA 70 (225)
Q Consensus 20 ~~a~a~t~tv~N~C~~tVwp~~~------------------------p-~~g~~L~~G~s~s~~~p~-~w~sGriw~ 70 (225)
+.....+++|.|.=.-+|.+|.. | ++....+||+++++++-+ +- ..+|+|
T Consensus 17 ~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~~~G-~r~v~G 92 (101)
T 4ep8_B 17 TGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVAFAG-HRAVFG 92 (101)
T ss_dssp TTCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEECCT-TCEECS
T ss_pred CCCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEEccC-ceEEEc
Confidence 34567899999999999999951 1 344567899999997533 32 355554
No 13
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=32.38 E-value=54 Score=25.09 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=24.7
Q ss_pred cceEEEEEcCCCCcee----------------eeeeCCCceeecCCCeEEEEcC
Q 027329 23 HGATFEIRNNCPFTVW----------------AAAVPGGGRQLIRGQTWTINVN 60 (225)
Q Consensus 23 ~a~t~tv~N~C~~tVw----------------p~~~p~~g~~L~~G~s~s~~~p 60 (225)
..++|+|.|....+.- ..+.|. --.|.||++..+.+-
T Consensus 45 ~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~-~G~L~Pge~~~I~v~ 97 (140)
T 3qbt_B 45 QKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPF-EGYLEPNETVDISLD 97 (140)
T ss_dssp EEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESC-EEEECTTCEEEEEEE
T ss_pred eeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCc-ccccCCCCeeEEEEE
Confidence 3578999998876662 222332 237889998888773
No 14
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=31.55 E-value=62 Score=26.00 Aligned_cols=38 Identities=21% Similarity=0.152 Sum_probs=28.6
Q ss_pred cccceEEEEEcCCCCceeeeeeCCCc-----eeecCCCeEEEE
Q 027329 21 STHGATFEIRNNCPFTVWAAAVPGGG-----RQLIRGQTWTIN 58 (225)
Q Consensus 21 ~a~a~t~tv~N~C~~tVwp~~~p~~g-----~~L~~G~s~s~~ 58 (225)
+.....|+|+|+.+.+|-+-++--.| ..|+||+.+.+.
T Consensus 15 s~~~~~V~FvN~s~~~V~v~WIDy~G~~v~Y~~L~PG~~~~q~ 57 (160)
T 1lm8_V 15 SREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIH 57 (160)
T ss_dssp CCCEEEEEEEECSSSCEEEEEECTTSCEEECCCBCTTEEEEEE
T ss_pred CCceEEEEEEeCCCCeEEEEEECCCCCEEEeeeeCCCCEEeCC
Confidence 34568999999999999877764222 249999988774
No 15
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=31.16 E-value=63 Score=26.06 Aligned_cols=38 Identities=21% Similarity=0.152 Sum_probs=28.9
Q ss_pred cccceEEEEEcCCCCceeeeeeCCCc-----eeecCCCeEEEE
Q 027329 21 STHGATFEIRNNCPFTVWAAAVPGGG-----RQLIRGQTWTIN 58 (225)
Q Consensus 21 ~a~a~t~tv~N~C~~tVwp~~~p~~g-----~~L~~G~s~s~~ 58 (225)
+.....++|+|+++.+|-+-++--.| ..|+||+.+.+.
T Consensus 18 S~~~~~V~FvN~s~~~V~v~WIDy~G~~~~Y~tL~PG~~~~~~ 60 (163)
T 4ajy_V 18 SREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIH 60 (163)
T ss_dssp CCCEEEEEEEECSSSCEEEEEECTTSCEEECCCBCTTEEEEEE
T ss_pred CCceEEEEEEeCCCCeEEEEEECCCCCEEEeeeeCCCCeEEec
Confidence 33467899999999999888764222 269999988774
No 16
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=27.00 E-value=92 Score=24.11 Aligned_cols=50 Identities=12% Similarity=0.293 Sum_probs=35.2
Q ss_pred ccccceEEEEEcCCCCceeeeee------------------------C-CCceeecCCCeEEEEc-CCCCccceeee
Q 027329 20 TSTHGATFEIRNNCPFTVWAAAV------------------------P-GGGRQLIRGQTWTINV-NPGTKQARIWA 70 (225)
Q Consensus 20 ~~a~a~t~tv~N~C~~tVwp~~~------------------------p-~~g~~L~~G~s~s~~~-p~~w~sGriw~ 70 (225)
......+++|+|.=.-+|.+|.. | ++....+||+++++++ |-+- ..+|+|
T Consensus 23 ~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~~~G-~r~v~G 98 (126)
T 4ubp_B 23 AGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTELGG-NREVFG 98 (126)
T ss_dssp TTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEECCT-TCEECS
T ss_pred CCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEEccC-CeEEeC
Confidence 34456899999999999999941 2 3455678999999975 3332 345554
No 17
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=27.00 E-value=92 Score=24.11 Aligned_cols=50 Identities=12% Similarity=0.293 Sum_probs=35.2
Q ss_pred ccccceEEEEEcCCCCceeeeee------------------------C-CCceeecCCCeEEEEc-CCCCccceeee
Q 027329 20 TSTHGATFEIRNNCPFTVWAAAV------------------------P-GGGRQLIRGQTWTINV-NPGTKQARIWA 70 (225)
Q Consensus 20 ~~a~a~t~tv~N~C~~tVwp~~~------------------------p-~~g~~L~~G~s~s~~~-p~~w~sGriw~ 70 (225)
......+++|+|.=.-+|.+|.. | ++....+||+++++++ |-+- ..+|+|
T Consensus 23 ~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~~~G-~r~v~G 98 (126)
T 4ac7_B 23 AGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTELGG-NREVFG 98 (126)
T ss_dssp TTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEECCT-TCEECS
T ss_pred CCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEEccC-CeEEeC
Confidence 34456899999999999999941 2 3455678999999975 3332 345554
Done!