Query 027332
Match_columns 225
No_of_seqs 168 out of 460
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 13:40:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027332.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027332hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vlpa1 d.41.2.2 (A:1-149) Nic 37.2 3.2 0.00023 31.6 -0.1 42 98-139 51-93 (149)
2 d1jhsa_ d.107.1.1 (A:) Ran-bin 31.5 6.9 0.0005 30.7 1.0 28 149-176 9-37 (188)
3 d1g5ta_ c.37.1.11 (A:) ATP:cor 16.9 42 0.0031 25.1 3.0 20 134-153 132-151 (157)
4 d1wxaa1 d.15.1.5 (A:8-110) Afa 16.8 1.1E+02 0.0083 20.3 5.2 50 70-120 3-54 (103)
5 d2fhfa1 b.1.18.2 (A:288-402) P 16.8 41 0.003 23.2 2.7 43 20-62 25-73 (115)
6 d1bf2a1 b.1.18.2 (A:1-162) Iso 11.7 81 0.0059 22.8 3.2 43 20-62 24-80 (162)
7 d1f9ya_ d.58.30.1 (A:) 6-hydro 11.2 1.4E+02 0.01 21.9 4.5 40 69-108 37-77 (158)
8 d1cbka_ d.58.30.1 (A:) 6-hydro 11.0 1.4E+02 0.01 21.9 4.5 40 69-108 38-78 (160)
9 d1yira2 d.41.2.2 (A:4-144) Nic 10.4 24 0.0017 26.1 -0.3 41 98-139 53-94 (141)
10 d1ybea2 d.41.2.2 (A:8-167) Nic 8.1 26 0.0019 26.5 -1.0 45 97-141 66-116 (160)
No 1
>d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.21 E-value=3.2 Score=31.58 Aligned_cols=42 Identities=2% Similarity=0.090 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcc-CCCCCcccccccccchHHHHHHHHhcCCCC
Q 027332 98 AEFRSFMEHLSG-KYHGDTYHLIAKNCNHFTEEVCMQLTGKCI 139 (225)
Q Consensus 98 ~e~~~~l~~L~~-~f~g~tYhLL~rNCNHFSd~lc~~L~Gk~I 139 (225)
+.+++.|+.|+. +|..+..+-|+.+|++|..++..+|-+-+.
T Consensus 51 ~gl~~~i~~l~~lrFt~eel~yL~~~~~~~~~~fl~~L~~~rF 93 (149)
T d1vlpa1 51 NWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIKYISSSNY 93 (149)
T ss_dssp HHHHHHHHHGGGCCCCHHHHHHHHHHCTTSCHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHcCCCCCHHHHHHHHhCCc
Confidence 578888898886 999999999999999999999999976443
No 2
>d1jhsa_ d.107.1.1 (A:) Ran-binding protein mog1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.52 E-value=6.9 Score=30.66 Aligned_cols=28 Identities=18% Similarity=0.404 Sum_probs=22.8
Q ss_pred hccccccccCCc-ceecccccCCCCCCcc
Q 027332 149 LGSFCNCLLPES-IQITAVAHLPDRPTYS 176 (225)
Q Consensus 149 iGs~~~cllP~~-~~~~~v~~~~~~~~~~ 176 (225)
.|-++.|.||.. +.++.+|++|++++..
T Consensus 9 fGGAI~~~lP~~f~DvS~~RqVPDnQEVF 37 (188)
T d1jhsa_ 9 YGGAITTVVPPGFIDASTLREVPDTQAVY 37 (188)
T ss_dssp GGGTEEEEECTTEEEGGGTSCCCTTEEEE
T ss_pred cCceEEEecCCCceeccccccCCCCcEEe
Confidence 466788999976 5589999999998764
No 3
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=16.91 E-value=42 Score=25.08 Aligned_cols=20 Identities=20% Similarity=0.021 Sum_probs=16.5
Q ss_pred hcCCCCChHHHHhhhhcccc
Q 027332 134 LTGKCIPGWVNRMARLGSFC 153 (225)
Q Consensus 134 L~Gk~IP~wInrlA~iGs~~ 153 (225)
|||+..|.++..+|.+-+-.
T Consensus 132 lTGr~~p~~L~e~ADlVTEm 151 (157)
T d1g5ta_ 132 ITGRGCHRDILDLADTVSEL 151 (157)
T ss_dssp EECSSCCHHHHHHCSEEEEC
T ss_pred EECCCCCHHHHHhcceeeee
Confidence 78999999999999875443
No 4
>d1wxaa1 d.15.1.5 (A:8-110) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.79 E-value=1.1e+02 Score=20.31 Aligned_cols=50 Identities=18% Similarity=0.319 Sum_probs=36.0
Q ss_pred CeEeeCCCC-CCCCceEEEEEeccccCCHHHHHHHHHHhccC-CCCCcccccc
Q 027332 70 GVFEVEPKS-CPGFIFRRSVLLGTTNLSRAEFRSFMEHLSGK-YHGDTYHLIA 120 (225)
Q Consensus 70 GI~~~~P~~-~pg~~~r~sI~LG~T~ls~~e~~~~l~~L~~~-f~g~tYhLL~ 120 (225)
|+..+-|+. .|+..| +++.+-.++-..+-|+..|+++.-. =.+..|.|..
T Consensus 3 G~lkVy~~~l~~~~~y-k~l~vs~~tTa~eVI~~~L~k~~l~~~~~~~y~L~e 54 (103)
T d1wxaa1 3 GTLRIYADSLKPNIPY-KTILLSTTDTADFAVAESLEKYGLEKENPKDYCIAR 54 (103)
T ss_dssp CEEEECCTTTCSSSCC-EEEECCSSCCHHHHHHHHHHHHTCSSSCTTTEEEEE
T ss_pred cEEEEEcCccCCCCCe-EEEEECCCCcHHHHHHHHHHHhCCCCCChhhEEEEE
Confidence 677777765 355555 5888888888888899999998643 3566777664
No 5
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]}
Probab=16.77 E-value=41 Score=23.18 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=27.5
Q ss_pred CCCcceEEEEEeeCCCcchh---hhh-cccceeeeeeE--EeCeEEeec
Q 027332 20 GSNHALLYLNVYDLTPLNNY---LYW-FGLGIFHSGIE--AHGLEYGFG 62 (225)
Q Consensus 20 ~~~~~~V~LnVYDLs~~n~~---l~~-lG~GI~HTGVe--V~G~EY~FG 62 (225)
..+...|.|.+||=...... +.. -.-|+||.-|. ..|..|.|-
T Consensus 25 AP~A~~V~L~l~~~~~~~~~~~~~~~~~~~GvW~~~i~~~~~G~~Y~y~ 73 (115)
T d2fhfa1 25 APTAQQVELVIYSADKKVIASHPMTRDSASGAWSWQGGSDLKGAFYRYA 73 (115)
T ss_dssp CTTCSEEEEEEECTTCCEEEEEECEECTTTCEEEEEECGGGTTCEEEEE
T ss_pred CCCCCEEEEEEECCCCCccceeeeeEcCCCCEEEEEECCCCCCCEEEEE
Confidence 44567899999986532211 111 23589999886 457777774
No 6
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]}
Probab=11.65 E-value=81 Score=22.81 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=26.5
Q ss_pred CCCcceEEEEEeeCCCcch-h----hhhcccceeeeeeEE---------eCeEEeec
Q 027332 20 GSNHALLYLNVYDLTPLNN-Y----LYWFGLGIFHSGIEA---------HGLEYGFG 62 (225)
Q Consensus 20 ~~~~~~V~LnVYDLs~~n~-~----l~~lG~GI~HTGVeV---------~G~EY~FG 62 (225)
......|.|.+||=..... . +....-||||.-|.. .|..|.|-
T Consensus 24 Ap~A~~V~L~ly~~~~~~~~~~~~~l~~~~~gvW~~~v~~~~~~~~g~~~G~~Y~yr 80 (162)
T d1bf2a1 24 SSQATRIVLYLYSAGYGVQESATYTLSPAGSGVWAVTVPVSSIKAAGITGAVYYGYR 80 (162)
T ss_dssp CSSCSEEEEEEESSSSSCCCSEEEECEECSTTEEEEEEEHHHHHHTTCCSCCEEEEE
T ss_pred CCCCCEEEEEEEcCCCCCcceeEEEcccccccEEEEEecccccccccCCCCcEEEEE
Confidence 5556889999998654221 1 122346999987742 25567663
No 7
>d1f9ya_ d.58.30.1 (A:) 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK {Escherichia coli [TaxId: 562]}
Probab=11.22 E-value=1.4e+02 Score=21.92 Aligned_cols=40 Identities=13% Similarity=0.167 Sum_probs=30.6
Q ss_pred CCeEeeCCCCCCC-CceEEEEEeccccCCHHHHHHHHHHhc
Q 027332 69 SGVFEVEPKSCPG-FIFRRSVLLGTTNLSRAEFRSFMEHLS 108 (225)
Q Consensus 69 sGI~~~~P~~~pg-~~~r~sI~LG~T~ls~~e~~~~l~~L~ 108 (225)
|-+++.+|-..++ -.|--.+.+..|.+++.++...+..+.
T Consensus 37 S~~y~T~p~g~~~qp~F~N~v~~~~T~l~p~~ll~~l~~IE 77 (158)
T d1f9ya_ 37 SSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIE 77 (158)
T ss_dssp CCCEEECCSSCSSSCCEEEEEEEEEECSCHHHHHHHHHHHH
T ss_pred ecceecccccccccchHhhhhhhhhhccCHHHHHHHHHHHH
Confidence 5677777754433 358888889999999999998887653
No 8
>d1cbka_ d.58.30.1 (A:) 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK {Haemophilus influenzae [TaxId: 727]}
Probab=11.01 E-value=1.4e+02 Score=21.90 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=30.6
Q ss_pred CCeEeeCCCCCCC-CceEEEEEeccccCCHHHHHHHHHHhc
Q 027332 69 SGVFEVEPKSCPG-FIFRRSVLLGTTNLSRAEFRSFMEHLS 108 (225)
Q Consensus 69 sGI~~~~P~~~pg-~~~r~sI~LG~T~ls~~e~~~~l~~L~ 108 (225)
|-+++.+|-...+ -.|--.+...+|.+++.++.+.+..+.
T Consensus 38 S~~y~T~p~g~~~~p~FlN~vv~~~T~l~p~~Ll~~l~~IE 78 (160)
T d1cbka_ 38 SSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIE 78 (160)
T ss_dssp CCCEEECCSSCSSSCCEEEEEEEEEECSCHHHHHHHHHHHH
T ss_pred cCceEcccccccchhhhhheeEEEEeCCCHHHHHHHHHHHH
Confidence 5677777754333 357778888999999999999887764
No 9
>d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=10.38 E-value=24 Score=26.09 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=33.2
Q ss_pred HHHHHHHHHhcc-CCCCCcccccccccchHHHHHHHHhcCCCC
Q 027332 98 AEFRSFMEHLSG-KYHGDTYHLIAKNCNHFTEEVCMQLTGKCI 139 (225)
Q Consensus 98 ~e~~~~l~~L~~-~f~g~tYhLL~rNCNHFSd~lc~~L~Gk~I 139 (225)
..+++.|+.|+. +|+.+.-+.|+ +|+.|.+++..+|-+-++
T Consensus 53 ~gl~~~i~~l~~lrFt~eei~yL~-~~~~f~~~fldyL~~frf 94 (141)
T d1yira2 53 PAIREQLEYLAGLAISDEQLAFLE-RIPFLAPDFIRFLGLFRF 94 (141)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHHH-TSTTSCHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHH-cCCCCCHHHHHHHHhCCC
Confidence 457777888875 89999989885 599999999999987554
No 10
>d1ybea2 d.41.2.2 (A:8-167) Nicotinate phosphoribosyltransferase, N-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=8.12 E-value=26 Score=26.47 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhcc-CCCCCcccccccccc-----hHHHHHHHHhcCCCCCh
Q 027332 97 RAEFRSFMEHLSG-KYHGDTYHLIAKNCN-----HFTEEVCMQLTGKCIPG 141 (225)
Q Consensus 97 ~~e~~~~l~~L~~-~f~g~tYhLL~rNCN-----HFSd~lc~~L~Gk~IP~ 141 (225)
...+++.|+.|+. +|+.+..+-|+.+|. .|..++..+|-+-+.+.
T Consensus 66 ~~gL~~~i~~l~~lrFt~eei~yL~~~~~~~~~~~f~~~fl~~L~~f~f~~ 116 (160)
T d1ybea2 66 EMELREQLDHARTLRLSKKENIWLAGNTFYGRSQIFEPEFLSWLSSYQLPE 116 (160)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHSCSSSCSCCSCHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHhcCCccccCcCCHHHHHHHhcCCCCc
Confidence 3568888888876 888888888888885 59999999998766654
Done!