Your job contains 1 sequence.
>027341
MVFRASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT
TTMSTHERKASIREFYAIIYPSLLQLQRGVTDTEDKKQKAVYMERYRRRDDEEQRQYTDA
DIEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVY
MDSRDIIDSATVTRENLRRLFLYIDKLPLIIPDNLFDPYDSHLR
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027341
(224 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006703 - symbol:AT5G58787 "AT5G58787" speci... 706 1.1e-69 1
TAIR|locus:2149750 - symbol:AIRP2 "ABA Insensitive RING P... 702 3.0e-69 1
TAIR|locus:505006120 - symbol:AT1G13195 species:3702 "Ara... 456 3.5e-43 1
TAIR|locus:2024026 - symbol:AT1G24440 species:3702 "Arabi... 455 4.5e-43 1
UNIPROTKB|Q5ZM74 - symbol:RNF141 "RING finger protein 141... 143 2.2e-09 1
UNIPROTKB|I3LDC9 - symbol:RNF141 "Uncharacterized protein... 140 1.1e-08 1
UNIPROTKB|Q32L15 - symbol:RNF141 "RING finger protein 141... 138 2.2e-08 1
UNIPROTKB|F1Q4F0 - symbol:RNF141 "RING finger protein 141... 138 2.2e-08 1
UNIPROTKB|Q8WVD5 - symbol:RNF141 "RING finger protein 141... 138 2.2e-08 1
MGI|MGI:1914400 - symbol:Rnf141 "ring finger protein 141"... 138 2.2e-08 1
RGD|1303154 - symbol:rnf141 "ring finger protein 141" spe... 138 2.2e-08 1
UNIPROTKB|Q6IV57 - symbol:Rnf141 "RING finger protein 141... 138 2.2e-08 1
UNIPROTKB|Q2XNS1 - symbol:RNF141 "RING finger protein 141... 138 2.3e-08 1
ZFIN|ZDB-GENE-040625-71 - symbol:rnf141 "ring finger prot... 134 8.9e-08 1
UNIPROTKB|E1BTQ2 - symbol:RNF8 "Uncharacterized protein" ... 113 1.0e-06 1
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 112 1.4e-06 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 103 1.6e-05 1
UNIPROTKB|F8WD60 - symbol:RNF168 "E3 ubiquitin-protein li... 101 2.7e-05 1
DICTYBASE|DDB_G0292408 - symbol:DDB_G0292408 "RING finger... 115 3.4e-05 1
TAIR|locus:2074678 - symbol:AT3G11110 species:3702 "Arabi... 108 4.5e-05 1
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 99 4.5e-05 1
UNIPROTKB|F5H0I9 - symbol:MKRN1 "E3 ubiquitin-protein lig... 113 6.4e-05 1
UNIPROTKB|Q6NRG0 - symbol:rnf8-b "E3 ubiquitin-protein li... 119 7.2e-05 1
UNIPROTKB|Q9ULV8 - symbol:CBLC "Signal transduction prote... 118 8.3e-05 1
TAIR|locus:2103162 - symbol:DAFL1 "DAF-Like gene 1" speci... 108 0.00014 1
FB|FBgn0035233 - symbol:Pex10 "Peroxin 10" species:7227 "... 113 0.00015 1
UNIPROTKB|F1N0B8 - symbol:RNF5 "Uncharacterized protein" ... 107 0.00018 1
TAIR|locus:2177881 - symbol:AT5G41350 species:3702 "Arabi... 109 0.00020 1
TAIR|locus:2169063 - symbol:AT5G47610 species:3702 "Arabi... 104 0.00030 1
UNIPROTKB|Q9PTI4 - symbol:MKRN1 "Uncharacterized protein"... 113 0.00032 1
TAIR|locus:2169125 - symbol:AT5G37250 "AT5G37250" species... 106 0.00034 1
UNIPROTKB|F1MF12 - symbol:MKRN1 "Uncharacterized protein"... 113 0.00034 1
UNIPROTKB|G3V789 - symbol:Mkrn1 "Protein Mkrn1" species:1... 113 0.00034 1
UNIPROTKB|Q9UHC7 - symbol:MKRN1 "E3 ubiquitin-protein lig... 113 0.00034 1
UNIPROTKB|F1SRP7 - symbol:MKRN1 "Uncharacterized protein"... 113 0.00034 1
UNIPROTKB|E2RRA5 - symbol:MKRN1 "Uncharacterized protein"... 113 0.00034 1
MGI|MGI:1929069 - symbol:Rnf8 "ring finger protein 8" spe... 113 0.00034 1
UNIPROTKB|A6QPZ5 - symbol:CBLC "CBLC protein" species:991... 113 0.00035 1
UNIPROTKB|E2RCK0 - symbol:CBLC "Uncharacterized protein" ... 113 0.00035 1
UNIPROTKB|Q13064 - symbol:MKRN3 "Probable E3 ubiquitin-pr... 113 0.00036 1
ZFIN|ZDB-GENE-040426-849 - symbol:rnf8 "ring finger prote... 113 0.00039 1
UNIPROTKB|Q7ZX20 - symbol:rnf8-a "E3 ubiquitin-protein li... 113 0.00040 1
TAIR|locus:2153554 - symbol:DAF "DEFECTIVE IN ANTHER DEHI... 104 0.00042 1
TAIR|locus:2169145 - symbol:AT5G37270 "AT5G37270" species... 106 0.00045 1
MGI|MGI:1859353 - symbol:Mkrn1 "makorin, ring finger prot... 112 0.00045 1
UNIPROTKB|Q13434 - symbol:MKRN4P "Putative E3 ubiquitin-p... 112 0.00046 1
UNIPROTKB|Q2HJ46 - symbol:RNF8 "E3 ubiquitin-protein liga... 112 0.00046 1
UNIPROTKB|E2RKD8 - symbol:RNF8 "Uncharacterized protein" ... 112 0.00046 1
UNIPROTKB|J9P6M8 - symbol:RNF8 "Uncharacterized protein" ... 112 0.00046 1
UNIPROTKB|F1RVS2 - symbol:LOC100153408 "Uncharacterized p... 112 0.00046 1
RGD|1308035 - symbol:Rnf8 "ring finger protein 8, E3 ubiq... 112 0.00046 1
UNIPROTKB|I3L6W2 - symbol:LOC100153408 "Uncharacterized p... 112 0.00046 1
UNIPROTKB|F1RMS6 - symbol:CBLC "Uncharacterized protein" ... 112 0.00048 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 90 0.00049 1
TAIR|locus:2181032 - symbol:DAFL2 "DAF-Like gene 2" speci... 101 0.00059 1
UNIPROTKB|O76064 - symbol:RNF8 "E3 ubiquitin-protein liga... 111 0.00060 1
UNIPROTKB|Q5R4I2 - symbol:RNF8 "E3 ubiquitin-protein liga... 111 0.00060 1
DICTYBASE|DDB_G0279263 - symbol:DDB_G0279263 "E3 ubiquiti... 113 0.00061 1
UNIPROTKB|E2QS10 - symbol:RNF5 "Uncharacterized protein" ... 103 0.00062 1
UNIPROTKB|Q99942 - symbol:RNF5 "E3 ubiquitin-protein liga... 103 0.00062 1
UNIPROTKB|A5A8Y3 - symbol:RNF5 "Uncharacterized protein" ... 103 0.00062 1
UNIPROTKB|C9J0Q4 - symbol:RAD18 "E3 ubiquitin-protein lig... 89 0.00063 1
UNIPROTKB|J3KS72 - symbol:TRIM37 "E3 ubiquitin-protein li... 89 0.00063 1
UNIPROTKB|E7EM95 - symbol:RNF5 "E3 ubiquitin-protein liga... 103 0.00066 1
ZFIN|ZDB-GENE-020213-1 - symbol:mkrn1 "makorin, ring fing... 109 0.00091 1
>TAIR|locus:505006703 [details] [associations]
symbol:AT5G58787 "AT5G58787" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG273394 EMBL:AY088898 EMBL:BT005412
EMBL:AK118993 IPI:IPI00519998 RefSeq:NP_568885.1 UniGene:At.29261
ProteinModelPortal:Q8L8N5 SMR:Q8L8N5 STRING:Q8L8N5
EnsemblPlants:AT5G58787.1 GeneID:835995 KEGG:ath:AT5G58787
TAIR:At5g58787 HOGENOM:HOG000241127 InParanoid:Q8L8N5 OMA:DWRGRSQ
PhylomeDB:Q8L8N5 ProtClustDB:CLSN2685154 ArrayExpress:Q8L8N5
Genevestigator:Q8L8N5 Uniprot:Q8L8N5
Length = 242
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 130/222 (58%), Positives = 159/222 (71%)
Query: 5 ASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXXXXXXXXXYKVYVDGTTTMS 64
A D+PRE DGA +QMR+SYSP A FLFLVQWTDC Y Y DG TTMS
Sbjct: 24 ALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFLGLLRVLIYMTYADGKTTMS 83
Query: 65 THERKASIREFYAIIYPSLLQLQRGVTDTEDKKQKAVYMXXXXXXXXXXXXXXTDADIER 124
+ERKASIREF A+I PSL QLQRGVTD +D KQK V ++ +IER
Sbjct: 84 VYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVCKMRYRKKDESEM---SEIEIER 140
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDSR 184
EEECGICME NSK+VLPNC H++C+KCYR+WR RSQSCPFCRDSLKRV+SGDLW+++D
Sbjct: 141 EEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSGDLWMFLDQN 200
Query: 185 DIIDSATVTRENLRRLFLYIDKLPLIIPDNLF--DPYDSHLR 224
D ++ + REN +RLF+YI+KLPL++PD ++ PYD H+R
Sbjct: 201 DTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHVR 242
>TAIR|locus:2149750 [details] [associations]
symbol:AIRP2 "ABA Insensitive RING Protein 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL161946 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
EMBL:AY050835 EMBL:AY091165 EMBL:DQ059129 IPI:IPI00537853
PIR:T48173 RefSeq:NP_195772.1 UniGene:At.22936
ProteinModelPortal:Q9M022 SMR:Q9M022 STRING:Q9M022
EnsemblPlants:AT5G01520.1 GeneID:831747 KEGG:ath:AT5G01520
TAIR:At5g01520 InParanoid:Q9M022 OMA:RNWRARS PhylomeDB:Q9M022
Genevestigator:Q9M022 Uniprot:Q9M022
Length = 242
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 125/215 (58%), Positives = 152/215 (70%)
Query: 5 ASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXXXXXXXXXYKVYVDGTTTMS 64
AS++P EYDG +QMR+SYSPAAHLFLFL+QWTDCH YK YVDG TTMS
Sbjct: 23 ASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGALGLLRILIYKAYVDGKTTMS 82
Query: 65 THERKASIREFYAIIYPSLLQLQRGVTDTEDKKQKAVYMXXXXXXXXXXXXXXTDADIER 124
HERK SIREFY +++PSLLQL G+TD E++KQK + ++ D+ER
Sbjct: 83 LHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKMSEIDLER 142
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDSR 184
EEECGIC+E +K+VLP CNH+MC+ CYR WR RSQSCPFCR SLKRVNSGDLW+Y S
Sbjct: 143 EEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWIYTCSA 202
Query: 185 DIIDSATVTRENLRRLFLYIDKLPLIIPDNLFDPY 219
+I D + +ENL+RL +YIDKLPL+ D PY
Sbjct: 203 EIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237
>TAIR|locus:505006120 [details] [associations]
symbol:AT1G13195 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007357
InterPro:IPR017907 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
UniGene:At.27310 UniGene:At.48183 EMBL:AY087531 EMBL:BT024484
EMBL:AK226915 IPI:IPI00548949 PIR:D86266 RefSeq:NP_563922.1
ProteinModelPortal:Q9SAF3 SMR:Q9SAF3 EnsemblPlants:AT1G13195.1
GeneID:837878 KEGG:ath:AT1G13195 TAIR:At1g13195 InParanoid:Q9SAF3
OMA:CLIPRYL PhylomeDB:Q9SAF3 Genevestigator:Q9SAF3 Uniprot:Q9SAF3
Length = 260
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 94/220 (42%), Positives = 126/220 (57%)
Query: 5 ASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTD----CHXXXXXXXXXXXXYKVYVDGT 60
A P + LQM++ +S A L LFL++W D C YKV DG
Sbjct: 34 AEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQ 93
Query: 61 TTMSTHERKASIREFYAIIYPSLLQLQRGVTDTEDKKQKA-VYMXXXXXXXXXXXXXXTD 119
++TH RKA+I EFY +I PSL L + + E + ++
Sbjct: 94 PKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSSRFSN 153
Query: 120 ADIEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWV 179
A +EREEECGIC+ET +K+VLPNC H+MC+KCYR W ++SQSCPFCR S+KRVNS DLWV
Sbjct: 154 AGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWV 213
Query: 180 YMDSRDIIDSATVTRENLRRLFLYIDKLPLIIPDNLFDPY 219
D++D+ T +RE+L R +LYI+ LP P+ LF Y
Sbjct: 214 LAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVY 253
>TAIR|locus:2024026 [details] [associations]
symbol:AT1G24440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC000103 InterPro:IPR017907 HOGENOM:HOG000241127
ProtClustDB:CLSN2685154 EMBL:AY085533 EMBL:BT000927 IPI:IPI00547120
PIR:E86378 RefSeq:NP_564218.1 UniGene:At.26915
ProteinModelPortal:Q9FYL9 SMR:Q9FYL9 EnsemblPlants:AT1G24440.1
GeneID:839060 KEGG:ath:AT1G24440 TAIR:At1g24440 eggNOG:NOG314445
InParanoid:Q9FYL9 OMA:CRGSIKR PhylomeDB:Q9FYL9 ArrayExpress:Q9FYL9
Genevestigator:Q9FYL9 Uniprot:Q9FYL9
Length = 251
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 96/226 (42%), Positives = 127/226 (56%)
Query: 5 ASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTD--CHXXXXXXXXXXXXYKVYVDGTTT 62
A++ P G LQM++ S A F+FL+QW D C YKV DG
Sbjct: 28 AAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFSCLLPRYFDFFHILIYKVRADGRWN 87
Query: 63 MSTHERKASIREFYAIIYPSLLQLQRGVTDTEDKK-----QKAVYMXXXXXXXXXXXXXX 117
S + RKA+IREFY +I PSL +L D D+ KA+
Sbjct: 88 RSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYPNPKAI---TKKQYDIEGSRYM 144
Query: 118 TDADIEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDL 177
D+ERE+ECGIC+E +K+VLPNC HAMC+KCYR W +S+SCPFCR S+KRVNS DL
Sbjct: 145 NSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSIKRVNSEDL 204
Query: 178 WVYMDSRDIIDSATVTRENLRRLFLYIDKLPLIIPDNLFDPYDSHL 223
WV D++D TVT+E+L R +L+I+ LP P+ F Y+ +L
Sbjct: 205 WVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNEYL 250
>UNIPROTKB|Q5ZM74 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK OrthoDB:EOG4GHZQ3 EMBL:AJ719510
IPI:IPI00597758 RefSeq:NP_001007926.1 UniGene:Gga.7687
ProteinModelPortal:Q5ZM74 SMR:Q5ZM74 Ensembl:ENSGALT00000009054
GeneID:423039 KEGG:gga:423039 InParanoid:Q5ZM74 NextBio:20825570
Uniprot:Q5ZM74
Length = 230
Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDSR 184
E+EC ICM+ ++LP C H+ C KC +W R +SCP CR + +GD WV D+
Sbjct: 152 EDECCICMDGRVDLILP-CAHSFCQKCIDKWSDRHRSCPVCRRQV--TGAGDSWVVSDAP 208
Query: 185 DIIDSAT 191
D AT
Sbjct: 209 TEDDIAT 215
>UNIPROTKB|I3LDC9 [details] [associations]
symbol:RNF141 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000003145
OMA:MWMGRVK EMBL:FP312948 Ensembl:ENSSSCT00000022900 Uniprot:I3LDC9
Length = 231
Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 153 EEECCICMDGRADLILP-CTHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 208
>UNIPROTKB|Q32L15 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BC109813 IPI:IPI00760467
RefSeq:NP_001035656.1 UniGene:Bt.107371 ProteinModelPortal:Q32L15
SMR:Q32L15 PRIDE:Q32L15 Ensembl:ENSBTAT00000021020 GeneID:539455
KEGG:bta:539455 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 InParanoid:Q32L15 OMA:MWMGRVK OrthoDB:EOG4GHZQ3
NextBio:20877998 Uniprot:Q32L15
Length = 230
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 207
>UNIPROTKB|F1Q4F0 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00390000003145 OMA:MWMGRVK EMBL:AAEX03012903
ProteinModelPortal:F1Q4F0 Ensembl:ENSCAFT00000039375 Uniprot:F1Q4F0
Length = 230
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 207
>UNIPROTKB|Q8WVD5 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CH471064 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 CTD:50862 eggNOG:NOG273394 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK OrthoDB:EOG4GHZQ3 EMBL:AF214680
EMBL:AK289764 EMBL:BC018104 EMBL:BT006662 IPI:IPI00152564
RefSeq:NP_057506.2 UniGene:Hs.44685 UniGene:Hs.712894 PDB:2ECN
PDBsum:2ECN ProteinModelPortal:Q8WVD5 SMR:Q8WVD5 IntAct:Q8WVD5
STRING:Q8WVD5 PhosphoSite:Q8WVD5 DMDM:74751546 PRIDE:Q8WVD5
DNASU:50862 Ensembl:ENST00000265981 GeneID:50862 KEGG:hsa:50862
UCSC:uc001mis.1 GeneCards:GC11M010533 HGNC:HGNC:21159 HPA:HPA018133
neXtProt:NX_Q8WVD5 PharmGKB:PA134981805 InParanoid:Q8WVD5
PhylomeDB:Q8WVD5 ChiTaRS:RNF141 EvolutionaryTrace:Q8WVD5
GenomeRNAi:50862 NextBio:53366 ArrayExpress:Q8WVD5 Bgee:Q8WVD5
CleanEx:HS_RNF141 CleanEx:HS_ZNF230 Genevestigator:Q8WVD5
GermOnline:ENSG00000110315 Uniprot:Q8WVD5
Length = 230
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 207
>MGI|MGI:1914400 [details] [associations]
symbol:Rnf141 "ring finger protein 141" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1914400 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK EMBL:AF353167 EMBL:AK006791
EMBL:AK011839 EMBL:AK015505 EMBL:BC018553 IPI:IPI00874421
RefSeq:NP_080275.2 UniGene:Mm.96867 ProteinModelPortal:Q99MB7
SMR:Q99MB7 STRING:Q99MB7 PhosphoSite:Q99MB7 PaxDb:Q99MB7
PRIDE:Q99MB7 Ensembl:ENSMUST00000106682 Ensembl:ENSMUST00000177236
GeneID:67150 KEGG:mmu:67150 UCSC:uc009jfp.1 NextBio:323730
Bgee:Q99MB7 CleanEx:MM_RNF141 Genevestigator:Q99MB7
GermOnline:ENSMUSG00000030788 Uniprot:Q99MB7
Length = 230
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 207
>RGD|1303154 [details] [associations]
symbol:rnf141 "ring finger protein 141" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1303154
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3 EMBL:AY621087 IPI:IPI00192051
RefSeq:NP_001001800.1 UniGene:Rn.127990 ProteinModelPortal:Q6IV57
SMR:Q6IV57 PhosphoSite:Q6IV57 PRIDE:Q6IV57
Ensembl:ENSRNOT00000024561 GeneID:308900 KEGG:rno:308900
UCSC:RGD:1303154 NextBio:659756 ArrayExpress:Q6IV57
Genevestigator:Q6IV57 GermOnline:ENSRNOG00000017900 Uniprot:Q6IV57
Length = 230
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 207
>UNIPROTKB|Q6IV57 [details] [associations]
symbol:Rnf141 "RING finger protein 141" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1303154 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:50862
eggNOG:NOG273394 GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3 EMBL:AY621087 IPI:IPI00192051
RefSeq:NP_001001800.1 UniGene:Rn.127990 ProteinModelPortal:Q6IV57
SMR:Q6IV57 PhosphoSite:Q6IV57 PRIDE:Q6IV57
Ensembl:ENSRNOT00000024561 GeneID:308900 KEGG:rno:308900
UCSC:RGD:1303154 NextBio:659756 ArrayExpress:Q6IV57
Genevestigator:Q6IV57 GermOnline:ENSRNOG00000017900 Uniprot:Q6IV57
Length = 230
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 207
>UNIPROTKB|Q2XNS1 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
HOGENOM:HOG000247058 HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3
EMBL:DQ273566 RefSeq:NP_001041484.1 UniGene:Cfa.10740
ProteinModelPortal:Q2XNS1 SMR:Q2XNS1 GeneID:476852 KEGG:cfa:476852
InParanoid:Q2XNS1 NextBio:20852447 Uniprot:Q2XNS1
Length = 231
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W R ++CP CR L+ + + WV D+
Sbjct: 153 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDA 208
>ZFIN|ZDB-GENE-040625-71 [details] [associations]
symbol:rnf141 "ring finger protein 141" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040625-71 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:50862
eggNOG:NOG273394 HOGENOM:HOG000247058 HOVERGEN:HBG055763
OrthoDB:EOG4GHZQ3 EMBL:AY621088 EMBL:BC071534 IPI:IPI00613818
RefSeq:NP_001007291.1 UniGene:Dr.77741 ProteinModelPortal:Q6IV56
SMR:Q6IV56 GeneID:414846 KEGG:dre:414846 InParanoid:Q6IV56
NextBio:20818742 Uniprot:Q6IV56
Length = 222
Score = 134 (52.2 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 125 EEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMDS 183
EEEC ICM+ + ++LP C H+ C KC +W +S++CP CR + N WV D+
Sbjct: 144 EEECCICMDGKADLILP-CAHSFCQKCIDKWSGQSRNCPVCRIQVTAANES--WVMSDA 199
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 113 (44.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 5 LENELQCTICSEHFIEAVTLNCAHSFCSYCIDEWTKRKVECPICRQEIK 53
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 112 (44.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 47 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIK 95
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 103 (41.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 127 ECGICMETNSKIVLPNCNHAMCLKCYREW---RIRSQSCPFCRDSLKR 171
EC IC+ET + V+ C H C C +W R Q CP C+ + R
Sbjct: 26 ECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISR 73
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 101 (40.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 125 EEECGICMETNSK-IVLPNCNHAMCLKCYREWRIR-SQSCPFCRDSLKRVNS 174
E +CGICME + + LP CNH +C C++ + S CPFCR +RV+S
Sbjct: 13 ECQCGICMEILVEPVTLP-CNHTLCKPCFQSTVEKASLCCPFCR---RRVSS 60
>DICTYBASE|DDB_G0292408 [details] [associations]
symbol:DDB_G0292408 "RING finger protein 141"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0292408 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000190
InterPro:IPR017907 eggNOG:NOG273394 RefSeq:XP_629590.1
ProteinModelPortal:Q54DA6 EnsemblProtists:DDB0184364 GeneID:8628650
KEGG:ddi:DDB_G0292408 InParanoid:Q54DA6 OMA:TETILWK Uniprot:Q54DA6
Length = 213
Score = 115 (45.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/117 (28%), Positives = 48/117 (41%)
Query: 69 KASIREFYAIIYPSLLQLQRGVTDTEDKKQKAVYMXXXXXXXXXXXXXXTDADIEREEE- 127
K + EFY+ + + +QL + ED K K IE EE+
Sbjct: 87 KLTFGEFYSFL--NNIQLY---FEKEDSKNK----NNSTTIATTTTTAEEKFKIEEEEDN 137
Query: 128 -CGICMETNSKIVLPN-CNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMD 182
C IC + + V+ + C HA C +C +W+ RS CP CR N D + D
Sbjct: 138 LCPICFDKEATFVVSSDCFHAFCPECAEDWKSRSNLCPLCRRENNNSNKLDFILIED 194
>TAIR|locus:2074678 [details] [associations]
symbol:AT3G11110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009991 EMBL:AC073395 EMBL:BT031381 IPI:IPI00524656
RefSeq:NP_187722.1 UniGene:At.53265 ProteinModelPortal:Q9SRM0
SMR:Q9SRM0 EnsemblPlants:AT3G11110.1 GeneID:820282
KEGG:ath:AT3G11110 TAIR:At3g11110 eggNOG:NOG241452
HOGENOM:HOG000238431 InParanoid:Q9SRM0 OMA:EKECCIC PhylomeDB:Q9SRM0
ProtClustDB:CLSN2684057 Genevestigator:Q9SRM0 GermOnline:AT3G11110
Uniprot:Q9SRM0
Length = 158
Score = 108 (43.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 120 ADIEREEECGICM---ETNSKI-VLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNS 174
A+ E E+EC IC+ E K+ VLP C+H +C W SCP CR S+ RV+S
Sbjct: 99 AEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI-RVDS 156
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 99 (39.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 127 ECGICMETNSKIVLPNCNHAMCLKCYREW---RIRSQSCPFCRDSLKR 171
EC IC++T V+ C H C C +W R Q CP C+ + R
Sbjct: 3 ECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISR 50
>UNIPROTKB|F5H0I9 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI01015445
ProteinModelPortal:F5H0I9 SMR:F5H0I9 Ensembl:ENST00000437223
UCSC:uc011krd.1 ArrayExpress:F5H0I9 Bgee:F5H0I9 Uniprot:F5H0I9
Length = 216
Score = 113 (44.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 7 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 66
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 67 ECRITSNFVIPSEYWV 82
>UNIPROTKB|Q6NRG0 [details] [associations]
symbol:rnf8-b "E3 ubiquitin-protein ligase RNF8-B"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HSSP:O76064
HOVERGEN:HBG023954 KO:K10667 EMBL:BC070792 RefSeq:NP_001084862.1
UniGene:Xl.4442 ProteinModelPortal:Q6NRG0 SMR:Q6NRG0 GeneID:431911
KEGG:xla:431911 CTD:431911 Xenbase:XB-GENE-5914276 Uniprot:Q6NRG0
Length = 532
Score = 119 (46.9 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDS-LKRVNSGDLWVY 180
++ E +C IC E + V NC H+ C C + WR R + CP CR L S L
Sbjct: 371 LDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWRKRKEECPICRQEILSETRSLVLDNC 430
Query: 181 MDSRDIIDSATVTRENLRRLFLYIDKLPLI 210
+DS ++D + +N RR L +++ ++
Sbjct: 431 IDS--MVDKLSPEMKN-RRAALILERKEMV 457
>UNIPROTKB|Q9ULV8 [details] [associations]
symbol:CBLC "Signal transduction protein CBL-C"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001784 "phosphotyrosine
binding" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0017124 "SH3 domain binding" evidence=IDA] [GO:0005154
"epidermal growth factor receptor binding" evidence=IDA]
[GO:0042059 "negative regulation of epidermal growth factor
receptor signaling pathway" evidence=IDA] [GO:0043407 "negative
regulation of MAP kinase activity" evidence=IDA] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=IDA] InterPro:IPR001841 InterPro:IPR000980
InterPro:IPR003153 InterPro:IPR011992 InterPro:IPR014741
InterPro:IPR024159 InterPro:IPR024162 Pfam:PF02262 Pfam:PF02761
PROSITE:PS50089 PROSITE:PS51506 SMART:SM00184 SMART:SM00252
Prosite:PS00518 GO:GO:0005634 Gene3D:3.30.505.10 GO:GO:0017124
GO:GO:0008270 GO:GO:0005509 Gene3D:1.10.238.10 GO:GO:0004871
GO:GO:0005154 GO:GO:0007166 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0043407 GO:GO:0004842 GO:GO:0001784 InterPro:IPR017907
GO:GO:0042787 HOVERGEN:HBG005255 KO:K04707 Gene3D:1.20.930.20
InterPro:IPR014742 PANTHER:PTHR23007 Pfam:PF02762 SUPFAM:SSF47668
HOGENOM:HOG000294176 EMBL:AB028645 EMBL:AF117646 EMBL:AF117647
EMBL:BC028915 IPI:IPI00008459 IPI:IPI00220418 RefSeq:NP_001124324.1
RefSeq:NP_036248.3 UniGene:Hs.466907 PDB:3OP0 PDBsum:3OP0
ProteinModelPortal:Q9ULV8 SMR:Q9ULV8 IntAct:Q9ULV8 MINT:MINT-247027
STRING:Q9ULV8 PhosphoSite:Q9ULV8 DMDM:125987803 PRIDE:Q9ULV8
DNASU:23624 Ensembl:ENST00000270279 Ensembl:ENST00000341505
GeneID:23624 KEGG:hsa:23624 UCSC:uc002ozs.3 UCSC:uc010ejt.3
CTD:23624 GeneCards:GC19P045281 H-InvDB:HIX0202847 HGNC:HGNC:15961
HPA:CAB008087 MIM:608453 neXtProt:NX_Q9ULV8 PharmGKB:PA26117
eggNOG:NOG318595 InParanoid:Q9ULV8 OMA:HSDSQTC OrthoDB:EOG4P8FJ1
PhylomeDB:Q9ULV8 GenomeRNAi:23624 NextBio:46378 Bgee:Q9ULV8
CleanEx:HS_CBLC Genevestigator:Q9ULV8 GermOnline:ENSG00000142273
GO:GO:0007175 Uniprot:Q9ULV8
Length = 474
Score = 118 (46.6 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 126 EECGICMETNSKIVLPNCNHAMCLKCYREWRIR-SQSCPFCRDSLKRVNSGDLWVYMDSR 184
E C IC E+N + + C H +C C W+ SQ+CPFCR +K + ++ +
Sbjct: 349 ELCKICAESNKDVKIEPCGHLLCSCCLAAWQHSDSQTCPFCRCEIKGWEAVSIYQFHGQA 408
Query: 185 DIIDSATVTRENLRRLFLYIDKLPLIIP 212
DS + + R L L ++PL P
Sbjct: 409 TAEDSGNSSDQEGRELEL--GQVPLSAP 434
>TAIR|locus:2103162 [details] [associations]
symbol:DAFL1 "DAF-Like gene 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC011708 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:BT004771 EMBL:AK227982 IPI:IPI00541327
RefSeq:NP_187702.1 UniGene:At.27986 ProteinModelPortal:Q9SG96
SMR:Q9SG96 EnsemblPlants:AT3G10910.1 GeneID:820261
KEGG:ath:AT3G10910 TAIR:At3g10910 eggNOG:NOG288147
InParanoid:Q9SG96 OMA:EPQANAP PhylomeDB:Q9SG96
ProtClustDB:CLSN2913382 Genevestigator:Q9SG96 GermOnline:AT3G10910
Uniprot:Q9SG96
Length = 181
Score = 108 (43.1 bits), Expect = 0.00014, P = 0.00014
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 127 ECGICM---ETNSKI-VLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVNSGDLWVYMD 182
EC IC+ E K+ VLP CNH ++C W + SCP CR SL + V
Sbjct: 113 ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQPSPMAVSRR 172
Query: 183 SRDIIDS 189
D++ S
Sbjct: 173 DEDMVVS 179
>FB|FBgn0035233 [details] [associations]
symbol:Pex10 "Peroxin 10" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048137
"spermatocyte division" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0007285 "primary spermatocyte
growth" evidence=IMP] [GO:0007112 "male meiosis cytokinesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:AE014296
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558 GO:GO:0007112
InterPro:IPR017907 GO:GO:0048137 GO:GO:0007285 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 EMBL:AY069290 RefSeq:NP_647624.1
UniGene:Dm.2194 SMR:Q9W0D7 IntAct:Q9W0D7 MINT:MINT-1647351
EnsemblMetazoa:FBtr0072743 EnsemblMetazoa:FBtr0333397 GeneID:38182
KEGG:dme:Dmel_CG7864 UCSC:CG7864-RA FlyBase:FBgn0035233
InParanoid:Q9W0D7 OrthoDB:EOG4ZS7K2 GenomeRNAi:38182 NextBio:807389
Uniprot:Q9W0D7
Length = 299
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 23/78 (29%), Positives = 31/78 (39%)
Query: 94 EDKKQKAVYMXXXXXXXXXXXXXXTDADIEREEECGICMETNSKIVLPNCNHAMCLKCYR 153
E K+Q+ + D D +C +C+E S L C H C C
Sbjct: 213 EHKRQQLESIKQAGKNFLQRSSSTKDVD-PNTPQCILCLEPRSDSSLTPCGHIFCWSCLL 271
Query: 154 EWRIRSQSCPFCRDSLKR 171
EW CP CR+SLK+
Sbjct: 272 EWLEERDECPLCRESLKK 289
>UNIPROTKB|F1N0B8 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 GeneTree:ENSGT00390000014107
OMA:FQSFGDT EMBL:DAAA02055357 IPI:IPI00699444 UniGene:Bt.1678
Ensembl:ENSBTAT00000035701 Uniprot:F1N0B8
Length = 180
Score = 107 (42.7 bits), Expect = 0.00018, P = 0.00018
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 127 ECGICMETNSKIVLPNCNHAMCLKCYREW---RIRSQSCPFCRDSLKRVN 173
EC IC+ET + V+ C H C C +W R Q CP C+ + R N
Sbjct: 26 ECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREN 75
>TAIR|locus:2177881 [details] [associations]
symbol:AT5G41350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006914 "autophagy" evidence=RCA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005739 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 ProtClustDB:CLSN2697998
EMBL:AY048293 EMBL:AY143828 IPI:IPI00528415 RefSeq:NP_568590.1
UniGene:At.6481 ProteinModelPortal:Q94AB7 SMR:Q94AB7 IntAct:Q94AB7
PRIDE:Q94AB7 EnsemblPlants:AT5G41350.1 GeneID:834137
KEGG:ath:AT5G41350 TAIR:At5g41350 eggNOG:NOG314203
InParanoid:Q94AB7 OMA:AYYYYPR PhylomeDB:Q94AB7
Genevestigator:Q94AB7 Uniprot:Q94AB7
Length = 212
Score = 109 (43.4 bits), Expect = 0.00020, P = 0.00020
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 122 IEREEECGICMET----NSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSL 169
IE EE+C IC+E N K+V C+H L C EW RS++CP C +
Sbjct: 155 IEEEEDCPICLEEYDIENPKLVA-KCDHHFHLACILEWMERSETCPVCNKEM 205
>TAIR|locus:2169063 [details] [associations]
symbol:AT5G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025628 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AK175469 EMBL:AK176643 EMBL:AY085503
IPI:IPI00529585 RefSeq:NP_199572.1 UniGene:At.29885
ProteinModelPortal:Q9FGJ6 SMR:Q9FGJ6 EnsemblPlants:AT5G47610.1
GeneID:834811 KEGG:ath:AT5G47610 TAIR:At5g47610 eggNOG:NOG304426
InParanoid:Q9FGJ6 OMA:VISALIC PhylomeDB:Q9FGJ6
ProtClustDB:CLSN2714317 Genevestigator:Q9FGJ6 GermOnline:AT5G47610
Uniprot:Q9FGJ6
Length = 166
Score = 104 (41.7 bits), Expect = 0.00030, P = 0.00030
Identities = 26/96 (27%), Positives = 38/96 (39%)
Query: 79 IYPSLLQLQRGVTDTEDKKQKAVYMXXXXXXXXXXXXXXTDADIE-REEECGICM---ET 134
+Y ++ R +TED + +D ++ E EC IC+ E
Sbjct: 57 LYAAIRCFLRPTLETEDDHKPDPEAAASSTPTTPTLVYSSDLELAGAEAECAICLSEFEQ 116
Query: 135 NSKI-VLPNCNHAMCLKCYREWRIRSQSCPFCRDSL 169
I VL C H +KC +W SCP CR S+
Sbjct: 117 GESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152
>UNIPROTKB|Q9PTI4 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5084 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 HOGENOM:HOG000252976 KO:K15687
CTD:23608 GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965
OMA:YQRGCCA OrthoDB:EOG45DWPM EMBL:AADN02006362 EMBL:AADN02006363
EMBL:AF192787 IPI:IPI00595405 RefSeq:NP_990073.1 UniGene:Gga.1197
Ensembl:ENSGALT00000020962 GeneID:395500 KEGG:gga:395500
InParanoid:Q9PTI4 NextBio:20815579 Uniprot:Q9PTI4
Length = 464
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 263 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 322
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 323 ECRITSNFVIPSEYWV 338
>TAIR|locus:2169125 [details] [associations]
symbol:AT5G37250 "AT5G37250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00546985 RefSeq:NP_198541.1 UniGene:At.55185
ProteinModelPortal:F4K5X5 SMR:F4K5X5 EnsemblPlants:AT5G37250.1
GeneID:833699 KEGG:ath:AT5G37250 Uniprot:F4K5X5
Length = 192
Score = 106 (42.4 bits), Expect = 0.00034, P = 0.00034
Identities = 23/55 (41%), Positives = 28/55 (50%)
Query: 118 TDADIEREEECGICMETNSK------IVLPNCNHAMCLKCYREWRIRSQSCPFCR 166
TD E E C IC+E S+ I+LP+C H C EW R +SCP CR
Sbjct: 127 TDLGDEEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCR 181
>UNIPROTKB|F1MF12 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 OMA:YQRGCCA
EMBL:DAAA02011734 EMBL:DAAA02011733 IPI:IPI00701209
Ensembl:ENSBTAT00000010932 ArrayExpress:F1MF12 Uniprot:F1MF12
Length = 480
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 272 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 331
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 332 ECRITSNFVIPSEYWV 347
>UNIPROTKB|G3V789 [details] [associations]
symbol:Mkrn1 "Protein Mkrn1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH473959 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
OMA:YQRGCCA ProteinModelPortal:G3V789 Ensembl:ENSRNOT00000013124
Uniprot:G3V789
Length = 481
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 333 ECRITSNFVIPSEYWV 348
>UNIPROTKB|Q9UHC7 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 Reactome:REACT_6900 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003682 GO:GO:0003676 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH236950 EMBL:CH471070
eggNOG:COG5084 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 KO:K15687 EMBL:AC069335 CTD:23608
HOVERGEN:HBG066965 OMA:YQRGCCA OrthoDB:EOG45DWPM EMBL:AF192784
EMBL:AF192793 EMBL:AF192789 EMBL:AF192790 EMBL:AF192791
EMBL:AF192792 EMBL:AM236048 EMBL:AF117233 EMBL:AL136812
EMBL:AK127030 EMBL:AK315552 EMBL:BC025955 EMBL:BC037400
EMBL:BC064838 EMBL:AB209298 IPI:IPI00033350 IPI:IPI00921845
IPI:IPI00946774 IPI:IPI00973591 RefSeq:NP_001138597.1
RefSeq:NP_038474.2 UniGene:Hs.741212 ProteinModelPortal:Q9UHC7
SMR:Q9UHC7 IntAct:Q9UHC7 MINT:MINT-1365598 STRING:Q9UHC7
PhosphoSite:Q9UHC7 DMDM:67477468 PRIDE:Q9UHC7 DNASU:23608
Ensembl:ENST00000255977 Ensembl:ENST00000443720
Ensembl:ENST00000474576 GeneID:23608 KEGG:hsa:23608 UCSC:uc003vvs.2
GeneCards:GC07M140152 HGNC:HGNC:7112 HPA:HPA000567 MIM:607754
neXtProt:NX_Q9UHC7 PharmGKB:PA30831 InParanoid:Q9UHC7
PhylomeDB:Q9UHC7 GenomeRNAi:23608 NextBio:46308 ArrayExpress:Q9UHC7
Bgee:Q9UHC7 CleanEx:HS_MKRN1 Genevestigator:Q9UHC7
GermOnline:ENSG00000133606 Uniprot:Q9UHC7
Length = 482
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 333 ECRITSNFVIPSEYWV 348
>UNIPROTKB|F1SRP7 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224 KO:K15687
CTD:23608 GeneTree:ENSGT00390000014093 OMA:YQRGCCA EMBL:CU655865
RefSeq:XP_003134656.1 UniGene:Ssc.10393 Ensembl:ENSSSCT00000017962
GeneID:100514261 KEGG:ssc:100514261 Uniprot:F1SRP7
Length = 482
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 333 ECRITSNFVIPSEYWV 348
>UNIPROTKB|E2RRA5 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 OMA:YQRGCCA
EMBL:AAEX03010214 EMBL:AAEX03010213 Ensembl:ENSCAFT00000006351
Uniprot:E2RRA5
Length = 487
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 278 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 337
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 338 ECRITSNFVIPSEYWV 353
>MGI|MGI:1929069 [details] [associations]
symbol:Rnf8 "ring finger protein 8" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=ISO] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO;IDA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0010212 "response
to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0033522 "histone H2A ubiquitination" evidence=ISO;IMP]
[GO:0033523 "histone H2B ubiquitination" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO;IMP] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0045190 "isotype switching" evidence=IMP]
[GO:0045739 "positive regulation of DNA repair" evidence=ISO]
[GO:0045900 "negative regulation of translational elongation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=ISO] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISO] [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=ISO] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISO] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 UniPathway:UPA00143 MGI:MGI:1929069 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007067
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043486 GO:GO:0045190
GO:GO:0004842 GO:GO:0030496 GO:GO:0042393 GO:GO:0045739
GO:GO:0000151 InterPro:IPR017907 GO:GO:0070936 GO:GO:0000781
GO:GO:0006303 GO:GO:0033523 GO:GO:0045900 GO:GO:0035861
GermOnline:ENSMUSG00000024019 GO:GO:0070535 HOVERGEN:HBG023954
KO:K10667 CTD:9025 GeneTree:ENSGT00400000022349
HOGENOM:HOG000154169 PANTHER:PTHR15067:SF3 EMBL:AK076180
EMBL:AK147168 EMBL:CT010295 EMBL:BC021778 EMBL:AJ242721
IPI:IPI00551150 RefSeq:NP_067394.1 UniGene:Mm.305994
ProteinModelPortal:Q8VC56 SMR:Q8VC56 DIP:DIP-59448N
PhosphoSite:Q8VC56 PRIDE:Q8VC56 Ensembl:ENSMUST00000024817
GeneID:58230 KEGG:mmu:58230 UCSC:uc008btf.1 NextBio:314253
Bgee:Q8VC56 CleanEx:MM_RNF8 Genevestigator:Q8VC56 Uniprot:Q8VC56
Length = 488
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK-RVNS 174
+E E +C IC E + V NC H+ C C EW R CP CR ++ R NS
Sbjct: 400 LENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESRTNS 453
>UNIPROTKB|A6QPZ5 [details] [associations]
symbol:CBLC "CBLC protein" species:9913 "Bos taurus"
[GO:0043407 "negative regulation of MAP kinase activity"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=IEA] [GO:0005154 "epidermal growth factor
receptor binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001784 "phosphotyrosine
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000980
InterPro:IPR003153 InterPro:IPR011992 InterPro:IPR014741
InterPro:IPR024159 InterPro:IPR024162 Pfam:PF02262 Pfam:PF02761
PROSITE:PS50089 PROSITE:PS51506 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 Gene3D:3.30.505.10 GO:GO:0008270 GO:GO:0005509
Gene3D:1.10.238.10 GO:GO:0004871 GO:GO:0007166 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0043407 GO:GO:0004842 InterPro:IPR017907
GO:GO:0042787 HOVERGEN:HBG005255 KO:K04707 Gene3D:1.20.930.20
InterPro:IPR014742 PANTHER:PTHR23007 Pfam:PF02762 SUPFAM:SSF47668
HOGENOM:HOG000294176 CTD:23624 eggNOG:NOG318595 OMA:HSDSQTC
OrthoDB:EOG4P8FJ1 GO:GO:0007175 GeneTree:ENSGT00390000011617
EMBL:DAAA02047337 EMBL:BC149567 IPI:IPI00714395
RefSeq:NP_001094718.1 UniGene:Bt.21193 SMR:A6QPZ5 STRING:A6QPZ5
Ensembl:ENSBTAT00000043713 GeneID:615866 KEGG:bta:615866
InParanoid:A6QPZ5 NextBio:20899833 Uniprot:A6QPZ5
Length = 491
Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 126 EECGICMETNSKIVLPNCNHAMCLKCYREWRIR-SQSCPFCRDSLK 170
E C IC E+N + + C H +C +C W SQ+CPFCR +K
Sbjct: 348 ELCKICAESNKDVKIEPCGHLLCSRCLAAWLCSDSQTCPFCRCEIK 393
>UNIPROTKB|E2RCK0 [details] [associations]
symbol:CBLC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043407 "negative regulation of MAP kinase
activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0005154
"epidermal growth factor receptor binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0001784 "phosphotyrosine binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000980 InterPro:IPR003153
InterPro:IPR011992 InterPro:IPR014741 InterPro:IPR024159
InterPro:IPR024162 Pfam:PF02262 Pfam:PF02761 PROSITE:PS50089
PROSITE:PS51506 SMART:SM00184 SMART:SM00252 Prosite:PS00518
GO:GO:0005634 Gene3D:3.30.505.10 GO:GO:0008270 GO:GO:0005509
Gene3D:1.10.238.10 GO:GO:0004871 GO:GO:0007166 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0043407 GO:GO:0004842 InterPro:IPR017907
GO:GO:0042787 Gene3D:1.20.930.20 InterPro:IPR014742
PANTHER:PTHR23007 Pfam:PF02762 SUPFAM:SSF47668 OMA:HSDSQTC
GO:GO:0007175 GeneTree:ENSGT00390000011617 EMBL:AAEX03000896
Ensembl:ENSCAFT00000007480 Uniprot:E2RCK0
Length = 497
Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 126 EECGICMETNSKIVLPNCNHAMCLKCYREWRIR-SQSCPFCRDSLK 170
E C IC E N + + C H +C +C W+ SQ+CPFCR +K
Sbjct: 349 ELCKICAEGNKDVKIKPCGHLLCSRCLAAWQNSDSQTCPFCRTEIK 394
>UNIPROTKB|Q13064 [details] [associations]
symbol:MKRN3 "Probable E3 ubiquitin-protein ligase
makorin-3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0003676 GO:GO:0016567 GO:GO:0030529 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 eggNOG:NOG268458 HOGENOM:HOG000252976 KO:K15687
HOVERGEN:HBG066965 EMBL:U19107 EMBL:BC044639 IPI:IPI00024229
PIR:G01614 RefSeq:NP_005655.1 UniGene:Hs.679587 UniGene:Hs.72964
ProteinModelPortal:Q13064 SMR:Q13064 IntAct:Q13064 STRING:Q13064
PhosphoSite:Q13064 DMDM:17368438 PaxDb:Q13064 PeptideAtlas:Q13064
PRIDE:Q13064 DNASU:7681 Ensembl:ENST00000314520 GeneID:7681
KEGG:hsa:7681 UCSC:uc001ywh.4 CTD:7681 GeneCards:GC15P023810
HGNC:HGNC:7114 HPA:HPA029494 MIM:603856 neXtProt:NX_Q13064
PharmGKB:PA30833 InParanoid:Q13064 OMA:HGQCKEG OrthoDB:EOG4QRH4M
PhylomeDB:Q13064 ChiTaRS:MKRN3 GenomeRNAi:7681 NextBio:29794
ArrayExpress:Q13064 Bgee:Q13064 CleanEx:HS_MKRN3
Genevestigator:Q13064 GermOnline:ENSG00000179455 InterPro:IPR026294
PANTHER:PTHR11224:SF16 Uniprot:Q13064
Length = 507
Score = 113 (44.8 bits), Expect = 0.00036, P = 0.00036
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 125 EEECGICMET-------NSKI--VLPNCNHAMCLKCYREWRIRSQ-------SCPFCRDS 168
++ CGICME N + +L NCNH+ C++C R WR Q SCP CR +
Sbjct: 308 DKVCGICMEVVYEKANPNDRRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVT 367
Query: 169 LKRVNSGDLWV 179
+ V + WV
Sbjct: 368 SELVIPSEFWV 378
>ZFIN|ZDB-GENE-040426-849 [details] [associations]
symbol:rnf8 "ring finger protein 8, E3 ubiquitin
protein ligase" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0043486 "histone exchange" evidence=ISS]
[GO:0045190 "isotype switching" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0045900 "negative regulation of translational
elongation" evidence=ISS] [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=ISS] [GO:0033522
"histone H2A ubiquitination" evidence=ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 ZFIN:ZDB-GENE-040426-849
GO:GO:0005634 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 EMBL:CU660013
Ensembl:ENSDART00000151429 Bgee:I3IRX0 Uniprot:I3IRX0
Length = 531
Score = 113 (44.8 bits), Expect = 0.00039, P = 0.00039
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFC 165
+E E +C IC E + V NC H+ C C EWR R CP C
Sbjct: 386 LESELQCSICSELFIEAVTLNCAHSFCQHCISEWRNRKDKCPMC 429
>UNIPROTKB|Q7ZX20 [details] [associations]
symbol:rnf8-a "E3 ubiquitin-protein ligase RNF8-A"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 EMBL:BC046256
RefSeq:NP_001080384.1 UniGene:Xl.75515 HSSP:O76064
ProteinModelPortal:Q7ZX20 SMR:Q7ZX20 PRIDE:Q7ZX20 GeneID:380076
KEGG:xla:380076 CTD:380076 Xenbase:XB-GENE-6254223
HOVERGEN:HBG023954 KO:K10667 Uniprot:Q7ZX20
Length = 540
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSL-KRVNSGDLWVY 180
++ E +C IC E + V NC H+ C C + W+ R + CP CR + S L
Sbjct: 376 LDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWKKRKEECPICRQEIVTETRSLVLDNC 435
Query: 181 MDSRDIIDSATVTRENLRRLFLYIDKLPLI 210
+DS ++D + +N RR L +++ ++
Sbjct: 436 IDS--MVDKLSPEMKN-RRAALILERKEMV 462
>TAIR|locus:2153554 [details] [associations]
symbol:DAF "DEFECTIVE IN ANTHER DEHISCENCE1- ( DAD1-)
Activating Factor" species:3702 "Arabidopsis thaliana" [GO:0008270
"zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 ProtClustDB:CLSN2913382 EMBL:AB010692
EMBL:BX830198 IPI:IPI00517240 RefSeq:NP_196147.1 UniGene:At.49733
ProteinModelPortal:Q9FLC6 SMR:Q9FLC6 EnsemblPlants:AT5G05280.1
GeneID:830410 KEGG:ath:AT5G05280 TAIR:At5g05280 InParanoid:Q9FLC6
OMA:KMKATEC PhylomeDB:Q9FLC6 Genevestigator:Q9FLC6
GermOnline:AT5G05280 Uniprot:Q9FLC6
Length = 176
Score = 104 (41.7 bits), Expect = 0.00042, P = 0.00042
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 127 ECGICM----ETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSL 169
EC IC+ E + VLP CNH +KC W + SCP CR SL
Sbjct: 112 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>TAIR|locus:2169145 [details] [associations]
symbol:AT5G37270 "AT5G37270" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AB017069
HOGENOM:HOG000131725 EMBL:DQ086856 IPI:IPI00526930
RefSeq:NP_198543.1 UniGene:At.65588 ProteinModelPortal:Q9FHT8
SMR:Q9FHT8 EnsemblPlants:AT5G37270.1 GeneID:833701
KEGG:ath:AT5G37270 TAIR:At5g37270 eggNOG:NOG255813
InParanoid:Q9FHT8 PhylomeDB:Q9FHT8 ProtClustDB:CLSN2686895
Genevestigator:Q9FHT8 Uniprot:Q9FHT8
Length = 208
Score = 106 (42.4 bits), Expect = 0.00045, P = 0.00045
Identities = 23/55 (41%), Positives = 28/55 (50%)
Query: 118 TDADIEREEECGICMETNSK------IVLPNCNHAMCLKCYREWRIRSQSCPFCR 166
TD E E C IC+E S+ I+LP+C H C EW R +SCP CR
Sbjct: 143 TDLGDEEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCR 197
>MGI|MGI:1859353 [details] [associations]
symbol:Mkrn1 "makorin, ring finger protein, 1" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
MGI:MGI:1859353 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003682 GO:GO:0003676 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 OrthoDB:EOG45DWPM
EMBL:AF192785 IPI:IPI00459256 IPI:IPI00850315 UniGene:Mm.270484
ProteinModelPortal:Q9QXP6 SMR:Q9QXP6 STRING:Q9QXP6
PhosphoSite:Q9QXP6 PaxDb:Q9QXP6 PRIDE:Q9QXP6
Ensembl:ENSMUST00000114822 InParanoid:Q9QXP6 ChiTaRS:MKRN1
Bgee:Q9QXP6 CleanEx:MM_MKRN1 Genevestigator:Q9QXP6
GermOnline:ENSMUSG00000029922 Uniprot:Q9QXP6
Length = 481
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
++R ++ CGICME K +L NCNH CLKC R+WR Q SCP
Sbjct: 273 VQRTKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 333 ECRITSNFVIPSEYWV 348
>UNIPROTKB|Q13434 [details] [associations]
symbol:MKRN4P "Putative E3 ubiquitin-protein ligase
makorin-4" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0003676
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOVERGEN:HBG066965 HPA:HPA000567 EMBL:U41315 IPI:IPI00006148
ProteinModelPortal:Q13434 SMR:Q13434 DMDM:17368441 PRIDE:Q13434
GeneCards:GC0XP040694 HGNC:HGNC:7115 neXtProt:NX_Q13434
PharmGKB:PA30834 Genevestigator:Q13434 GermOnline:ENSG00000197639
Uniprot:Q13434
Length = 485
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 124 REEECGICMET-NSKI--------VLPNCNHAMCLKCYREWRIRSQ-------SCPFCRD 167
+++ CGICME K +L NCNH CLKC R+WR + SCP CR
Sbjct: 312 KDKVCGICMEVVYEKANPNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRI 371
Query: 168 SLKRVNSGDLWV 179
+ V + WV
Sbjct: 372 TSNFVIPSEYWV 383
>UNIPROTKB|Q2HJ46 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9913
"Bos taurus" [GO:0045190 "isotype switching" evidence=ISS]
[GO:0033522 "histone H2A ubiquitination" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0043486 "histone
exchange" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0006974 "response to
DNA damage stimulus" evidence=ISS] [GO:0000781 "chromosome,
telomeric region" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0045739 "positive regulation of DNA repair" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0030496 "midbody" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 HSSP:P25916 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HOVERGEN:HBG023954
KO:K10667 EMBL:BC113317 IPI:IPI00721755 RefSeq:NP_001039681.1
UniGene:Bt.41339 ProteinModelPortal:Q2HJ46 SMR:Q2HJ46 STRING:Q2HJ46
PRIDE:Q2HJ46 Ensembl:ENSBTAT00000010959 GeneID:515933
KEGG:bta:515933 CTD:9025 eggNOG:NOG242257
GeneTree:ENSGT00400000022349 HOGENOM:HOG000154169 InParanoid:Q2HJ46
OMA:EVTEEDW OrthoDB:EOG4TF0KP NextBio:20872060
PANTHER:PTHR15067:SF3 Uniprot:Q2HJ46
Length = 487
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 399 LENELQCIICSEYFVEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIK 447
>UNIPROTKB|E2RKD8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045900 "negative regulation of translational
elongation" evidence=IEA] [GO:0045739 "positive regulation of DNA
repair" evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0016881 GO:GO:0045739 GO:GO:0000151
InterPro:IPR017907 GO:GO:0033523 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:AAEX03008298 Ensembl:ENSCAFT00000002283
Uniprot:E2RKD8
Length = 487
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIK 447
>UNIPROTKB|J9P6M8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 KO:K10667 CTD:9025 GeneTree:ENSGT00400000022349
OMA:EVTEEDW PANTHER:PTHR15067:SF3 EMBL:AAEX03008298
RefSeq:XP_864730.1 ProteinModelPortal:J9P6M8
Ensembl:ENSCAFT00000047572 GeneID:481775 KEGG:cfa:481775
Uniprot:J9P6M8
Length = 487
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIK 447
>UNIPROTKB|F1RVS2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:CU467025 ProteinModelPortal:F1RVS2
Ensembl:ENSSSCT00000001757 ArrayExpress:F1RVS2 Uniprot:F1RVS2
Length = 487
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIK 447
>RGD|1308035 [details] [associations]
symbol:Rnf8 "ring finger protein 8, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO;ISS] [GO:0000781 "chromosome, telomeric
region" evidence=ISO;ISS] [GO:0003682 "chromatin binding"
evidence=ISO;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006302 "double-strand break repair" evidence=ISO;ISS]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO;ISS] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=ISO;ISS] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030496
"midbody" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0033522 "histone H2A ubiquitination"
evidence=ISO;ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0042393 "histone binding" evidence=ISO;ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISO;ISS]
[GO:0043486 "histone exchange" evidence=ISO;ISS] [GO:0045190
"isotype switching" evidence=ISO;ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO;ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISO;ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA;ISO] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISO;ISS] [GO:0070535 "histone
H2A K63-linked ubiquitination" evidence=ISO;ISS] [GO:0070936
"protein K48-linked ubiquitination" evidence=ISO;ISS]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
RGD:1308035 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HSSP:O76064
HOVERGEN:HBG023954 KO:K10667 CTD:9025 HOGENOM:HOG000154169
PANTHER:PTHR15067:SF3 EMBL:BC099079 IPI:IPI00372827
RefSeq:NP_001020898.1 UniGene:Rn.12463 ProteinModelPortal:Q4KLN8
SMR:Q4KLN8 PRIDE:Q4KLN8 Ensembl:ENSRNOT00000065629 GeneID:361815
KEGG:rno:361815 UCSC:RGD:1308035 NextBio:677706 ArrayExpress:Q4KLN8
Genevestigator:Q4KLN8 Uniprot:Q4KLN8
Length = 487
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK-RVNS 174
+E E +C IC E + V NC H+ C C EW R CP CR ++ R NS
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSFCISEWMKRKVECPICRKDIESRTNS 452
>UNIPROTKB|I3L6W2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 OMA:EVTEEDW
PANTHER:PTHR15067:SF3 EMBL:CU467025 Ensembl:ENSSSCT00000028776
Uniprot:I3L6W2
Length = 488
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIK 447
>UNIPROTKB|F1RMS6 [details] [associations]
symbol:CBLC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0023051 "regulation of signaling" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0001784 "phosphotyrosine binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000980 InterPro:IPR003153
InterPro:IPR011992 InterPro:IPR014741 InterPro:IPR024159
InterPro:IPR024162 Pfam:PF02262 Pfam:PF02761 PROSITE:PS50089
PROSITE:PS51506 SMART:SM00184 SMART:SM00252 Prosite:PS00518
GO:GO:0005634 Gene3D:3.30.505.10 GO:GO:0008270 GO:GO:0005509
Gene3D:1.10.238.10 GO:GO:0016567 GO:GO:0004871 GO:GO:0007166
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 Gene3D:1.20.930.20 InterPro:IPR014742
PANTHER:PTHR23007 Pfam:PF02762 SUPFAM:SSF47668 GO:GO:0023051
GeneTree:ENSGT00390000011617 EMBL:CU459172
Ensembl:ENSSSCT00000003421 OMA:ERYINKS Uniprot:F1RMS6
Length = 503
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 126 EECGICMETNSKIVLPNCNHAMCLKCYREWRIR-SQSCPFCRDSLK 170
E C IC E N + + C H +C +C W+ SQ+CPFCR +K
Sbjct: 352 ELCKICAERNKDVKIEPCGHLLCSRCLATWQNSDSQTCPFCRCQIK 397
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 90 (36.7 bits), Expect = 0.00049, P = 0.00049
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQS---CPFCRDSLKRVNSGDLW 178
+E E C IC++ V +C H C C + R S S CP C+ K+ N +W
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
>TAIR|locus:2181032 [details] [associations]
symbol:DAFL2 "DAF-Like gene 2" species:3702 "Arabidopsis
thaliana" [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AL162351 EMBL:BT010682 EMBL:BT010973
IPI:IPI00526186 PIR:T48209 RefSeq:NP_195808.1 UniGene:At.33488
UniGene:At.70718 ProteinModelPortal:Q9LZV8 SMR:Q9LZV8
EnsemblPlants:AT5G01880.1 GeneID:831691 KEGG:ath:AT5G01880
TAIR:At5g01880 InParanoid:Q9LZV8 OMA:ATECAIC PhylomeDB:Q9LZV8
ProtClustDB:CLSN2916663 Genevestigator:Q9LZV8 GermOnline:AT5G01880
Uniprot:Q9LZV8
Length = 159
Score = 101 (40.6 bits), Expect = 0.00059, P = 0.00059
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 127 ECGICM---ETNSKI-VLPNCNHAMCLKCYREWRIRSQSCPFCRDSLKRVN 173
EC IC+ ++ VLP CNH+ + C W + SCP CR SL V+
Sbjct: 104 ECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIEVH 154
>UNIPROTKB|O76064 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9606
"Homo sapiens" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010212 "response
to ionizing radiation" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0045739 "positive regulation of DNA repair" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IDA] [GO:0033522
"histone H2A ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0045900 "negative regulation of translational
elongation" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IDA] [GO:0000781 "chromosome, telomeric
region" evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0036297 "interstrand cross-link repair"
evidence=TAS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0043486 "histone exchange"
evidence=ISS] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IMP;IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0033523 "histone H2B ubiquitination" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0045190
"isotype switching" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0042803 EMBL:CH471081
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0051865 GO:GO:0000781 GO:GO:0006303
GO:GO:0033523 GO:GO:0036297 GO:GO:0045900 GO:GO:0035861
GO:GO:0070535 HOVERGEN:HBG023954 KO:K10667 CTD:9025
eggNOG:NOG242257 HOGENOM:HOG000154169 OMA:EVTEEDW OrthoDB:EOG4TF0KP
PANTHER:PTHR15067:SF3 EMBL:AB012770 EMBL:AF334675 EMBL:AB014546
EMBL:AK298319 EMBL:BT007446 EMBL:AK222765 EMBL:AL096712
EMBL:BC007517 IPI:IPI00022561 IPI:IPI00923427 RefSeq:NP_003949.1
RefSeq:NP_898901.1 UniGene:Hs.485278 PDB:2CSW PDB:2PIE PDB:4AYC
PDB:4EPO PDBsum:2CSW PDBsum:2PIE PDBsum:4AYC PDBsum:4EPO
ProteinModelPortal:O76064 SMR:O76064 DIP:DIP-31265N IntAct:O76064
MINT:MINT-1459889 STRING:O76064 PhosphoSite:O76064 PaxDb:O76064
PRIDE:O76064 DNASU:9025 Ensembl:ENST00000229866
Ensembl:ENST00000373479 Ensembl:ENST00000394443
Ensembl:ENST00000469731 GeneID:9025 KEGG:hsa:9025 UCSC:uc003onq.4
GeneCards:GC06P037321 HGNC:HGNC:10071 MIM:611685 neXtProt:NX_O76064
PharmGKB:PA34445 PhylomeDB:O76064 EvolutionaryTrace:O76064
GenomeRNAi:9025 NextBio:33813 ArrayExpress:O76064 Bgee:O76064
CleanEx:HS_RNF8 Genevestigator:O76064 GermOnline:ENSG00000112130
Uniprot:O76064
Length = 485
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00060
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 397 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIK 445
>UNIPROTKB|Q5R4I2 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9601
"Pongo abelii" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0042803 GO:GO:0051301
GO:GO:0007067 GO:GO:0007286 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043486
GO:GO:0045190 GO:GO:0004842 GO:GO:0030496 GO:GO:0042393
GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907 GO:GO:0070936
GO:GO:0000781 GO:GO:0006303 GO:GO:0033523 GO:GO:0045900
GO:GO:0035861 GO:GO:0070535 HSSP:O76064 HOVERGEN:HBG023954
KO:K10667 CTD:9025 PANTHER:PTHR15067:SF3 EMBL:CR861266
RefSeq:NP_001126963.1 UniGene:Pab.1586 ProteinModelPortal:Q5R4I2
SMR:Q5R4I2 GeneID:100173982 KEGG:pon:100173982 InParanoid:Q5R4I2
Uniprot:Q5R4I2
Length = 486
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00060
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 122 IEREEECGICMETNSKIVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
+E E +C IC E + V NC H+ C C EW R CP CR +K
Sbjct: 398 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIK 446
>DICTYBASE|DDB_G0279263 [details] [associations]
symbol:DDB_G0279263 "E3 ubiquitin-protein ligase
CHFR" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 dictyBase:DDB_G0279263 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000030
InterPro:IPR017907 eggNOG:NOG253207 RefSeq:XP_641760.1
ProteinModelPortal:Q54X17 EnsemblProtists:DDB0205685 GeneID:8621958
KEGG:ddi:DDB_G0279263 InParanoid:Q54X17 OMA:HICEQTK Uniprot:Q54X17
Length = 742
Score = 113 (44.8 bits), Expect = 0.00061, P = 0.00061
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 128 CGICMETNSK-IVLPNCNHAMCLKCYREWRIRSQSCPFCRDSLK 170
CGIC + K + L C H C+ CY +WR S CP CR S+K
Sbjct: 404 CGICQDIIYKCLTLIPCMHNFCVCCYGDWRANSMDCPQCRQSVK 447
>UNIPROTKB|E2QS10 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 KO:K10666 GeneTree:ENSGT00390000014107
CTD:6048 OMA:FQSFGDT EMBL:AAEX03008226 RefSeq:XP_532092.1
Ensembl:ENSCAFT00000001208 GeneID:474858 KEGG:cfa:474858
NextBio:20850802 Uniprot:E2QS10
Length = 180
Score = 103 (41.3 bits), Expect = 0.00062, P = 0.00062
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 127 ECGICMETNSKIVLPNCNHAMCLKCYREW---RIRSQSCPFCRDSLKR 171
EC IC+ET + V+ C H C C +W R Q CP C+ + R
Sbjct: 26 ECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISR 73
>UNIPROTKB|Q99942 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IDA] [GO:0044257 "cellular
protein catabolic process" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IMP] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 EMBL:AL662884
GO:GO:0071712 EMBL:U89336 EMBL:AL845464 EMBL:BX284686 EMBL:BX927239
EMBL:CR933878 EMBL:CR812478 EMBL:AL662830 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 HOVERGEN:HBG054495 EMBL:AB056869
EMBL:AJ243936 EMBL:AK311859 EMBL:BT007105 EMBL:BC004155
EMBL:BC111392 EMBL:BC119741 EMBL:BC119742 EMBL:BC127651
EMBL:BC127652 EMBL:BC148255 IPI:IPI00012608 RefSeq:NP_008844.1
UniGene:Hs.731774 ProteinModelPortal:Q99942 SMR:Q99942
DIP:DIP-29268N IntAct:Q99942 MINT:MINT-1032027 STRING:Q99942
PhosphoSite:Q99942 DMDM:74762702 PRIDE:Q99942 DNASU:6048
Ensembl:ENST00000375094 Ensembl:ENST00000413786
Ensembl:ENST00000432616 Ensembl:ENST00000445885
Ensembl:ENST00000449794 Ensembl:ENST00000453473
Ensembl:ENST00000456167 GeneID:6048 KEGG:hsa:6048 UCSC:uc003oaj.4
CTD:6048 GeneCards:GC06P032146 H-InvDB:HIX0034363 HGNC:HGNC:10068
HPA:CAB034107 MIM:602677 neXtProt:NX_Q99942 PharmGKB:PA34442
InParanoid:Q99942 OMA:FQSFGDT OrthoDB:EOG469QVX GenomeRNAi:6048
NextBio:23565 ArrayExpress:Q99942 Bgee:Q99942 CleanEx:HS_RNF5
Genevestigator:Q99942 GermOnline:ENSG00000204308 Uniprot:Q99942
Length = 180
Score = 103 (41.3 bits), Expect = 0.00062, P = 0.00062
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 127 ECGICMETNSKIVLPNCNHAMCLKCYREW---RIRSQSCPFCRDSLKR 171
EC IC+ET + V+ C H C C +W R Q CP C+ + R
Sbjct: 26 ECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISR 73
>UNIPROTKB|A5A8Y3 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 EMBL:AL773562 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 CTD:6048 OMA:FQSFGDT OrthoDB:EOG469QVX
EMBL:CT954269 RefSeq:NP_001116696.1 UniGene:Ssc.1246
ProteinModelPortal:A5A8Y3 Ensembl:ENSSSCT00000001585
GeneID:100144528 KEGG:ssc:100144528 Uniprot:A5A8Y3
Length = 180
Score = 103 (41.3 bits), Expect = 0.00062, P = 0.00062
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 127 ECGICMETNSKIVLPNCNHAMCLKCYREW---RIRSQSCPFCRDSLKR 171
EC IC+ET + V+ C H C C +W R Q CP C+ + R
Sbjct: 26 ECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISR 73
>UNIPROTKB|C9J0Q4 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0045910 EMBL:AC068312
EMBL:AC008151 EMBL:AC034186 HGNC:HGNC:18278 HOGENOM:HOG000234845
IPI:IPI00879143 ProteinModelPortal:C9J0Q4 SMR:C9J0Q4 STRING:C9J0Q4
Ensembl:ENST00000413832 ArrayExpress:C9J0Q4 Bgee:C9J0Q4
Uniprot:C9J0Q4
Length = 92
Score = 89 (36.4 bits), Expect = 0.00063, P = 0.00063
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 128 CGICMET-NSKIVLPNCNHAMCLKCYREWRIRSQSCPFC 165
CGIC E N +++P C+H C C R++ CP C
Sbjct: 25 CGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTC 63
>UNIPROTKB|J3KS72 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3KS72
Ensembl:ENST00000577554 Uniprot:J3KS72
Length = 67
Score = 89 (36.4 bits), Expect = 0.00063, P = 0.00063
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 128 CGICMET-NSKIVLPNCNHAMCLKCYREWRIRSQS-CPFCRDSLKR 171
C ICME + P+C+ C C R W ++ CP CR SL R
Sbjct: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRVSLCR 60
>UNIPROTKB|E7EM95 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662884 EMBL:AL845464 EMBL:BX284686
EMBL:BX927239 EMBL:CR933878 EMBL:CR812478 EMBL:AL662830
HGNC:HGNC:10068 IPI:IPI00910392 SMR:E7EM95 Ensembl:ENST00000427134
Ensembl:ENST00000547812 Ensembl:ENST00000548239
Ensembl:ENST00000549150 Ensembl:ENST00000549680
Ensembl:ENST00000549803 Ensembl:ENST00000550243 Uniprot:E7EM95
Length = 182
Score = 103 (41.3 bits), Expect = 0.00066, P = 0.00066
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 127 ECGICMETNSKIVLPNCNHAMCLKCYREW---RIRSQSCPFCRDSLKR 171
EC IC+ET + V+ C H C C +W R Q CP C+ + R
Sbjct: 26 ECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISR 73
>ZFIN|ZDB-GENE-020213-1 [details] [associations]
symbol:mkrn1 "makorin, ring finger protein, 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-020213-1
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0003676
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 HSSP:P47974 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 EMBL:CR792454 EMBL:CT826375
EMBL:BC095243 EMBL:AF277173 IPI:IPI00639757 RefSeq:NP_694510.1
UniGene:Dr.78561 ProteinModelPortal:Q4VBT5 STRING:Q4VBT5
Ensembl:ENSDART00000061070 GeneID:170782 KEGG:dre:170782 CTD:23608
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 InParanoid:Q4VBT5
OMA:YQRGCCA OrthoDB:EOG45DWPM NextBio:20797100 Bgee:Q4VBT5
Uniprot:Q4VBT5
Length = 439
Score = 109 (43.4 bits), Expect = 0.00091, P = 0.00091
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 122 IEREEE--CGICME-----TNSKI----VLPNCNHAMCLKCYREWRIRSQ-------SCP 163
I+R ++ CG+CME TN +L NC H CLKC R+WR Q SCP
Sbjct: 228 IQRSKDMMCGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCIRKWRSAKQFESKIIKSCP 287
Query: 164 FCRDSLKRVNSGDLWV 179
CR + V + WV
Sbjct: 288 ECRITSNFVIPSEYWV 303
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.138 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 224 198 0.00083 111 3 11 22 0.40 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 616 (65 KB)
Total size of DFA: 195 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.20u 0.09s 15.29t Elapsed: 00:00:01
Total cpu time: 15.20u 0.09s 15.29t Elapsed: 00:00:01
Start: Fri May 10 11:05:48 2013 End: Fri May 10 11:05:49 2013