Query 027342
Match_columns 224
No_of_seqs 17 out of 19
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 13:57:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nfg_B DNA-directed RNA polyme 97.3 0.00095 3.3E-08 53.6 7.9 93 8-107 4-116 (123)
2 3kgz_A Cupin 2 conserved barre 38.7 23 0.0008 27.4 3.2 118 5-133 16-148 (156)
3 1dwm_A LUTI, linum usitatissin 33.0 32 0.0011 24.0 2.9 26 39-64 38-65 (70)
4 3jzv_A Uncharacterized protein 31.8 1.3E+02 0.0044 23.5 6.5 115 9-134 29-159 (166)
5 1d3b_A Protein (small nuclear 28.1 8.5 0.00029 27.1 -0.9 30 37-66 3-36 (75)
6 1mit_A RCMTI-V, trypsin inhibi 27.5 44 0.0015 23.4 2.8 26 39-64 37-64 (69)
7 3ibm_A Cupin 2, conserved barr 26.5 2.2E+02 0.0075 21.8 7.7 80 32-121 56-149 (167)
8 1vbw_A Trypsin inhibitor BGIT; 24.8 56 0.0019 22.8 2.9 26 39-64 36-63 (68)
9 2y9a_D Small nuclear ribonucle 24.5 18 0.00061 28.4 0.3 30 37-66 3-36 (126)
10 2ci2_I Chymotrypsin inhibitor 22.9 60 0.002 23.6 2.9 26 39-64 51-78 (83)
11 2bgo_A Endo-B1,4-mannanase 5C; 22.7 2.3E+02 0.008 22.8 6.6 54 37-94 18-83 (140)
12 3nok_A Glutaminyl cyclase; bet 21.0 2.7E+02 0.0092 24.1 7.1 64 49-118 115-188 (268)
13 1to2_I Chymotrypsin inhibitor 20.6 55 0.0019 22.6 2.2 26 39-64 32-59 (64)
No 1
>3nfg_B DNA-directed RNA polymerase I subunit RPA34; triple barrel, transcription, dimerization; 2.51A {Candida glabrata} PDB: 3nff_B
Probab=97.26 E-value=0.00095 Score=53.63 Aligned_cols=93 Identities=20% Similarity=0.426 Sum_probs=57.0
Q ss_pred ccCCCchhhhcccCcccCCCC----CCCceeEEEecCCCCC-CCCCCceeEEeecCCcceeeeecCCCCeeeeeeccCCC
Q 027342 8 GYKPTEEYEEELRDPLVDLSL----IDSTELWLIQWPYKQM-PDFDGKELSLELRGNGRLGSFEDSSGKAYDIVSNDFQE 82 (224)
Q Consensus 8 ~YeP~~~Fve~~~e~l~d~~l----tDStELWLIQ~P~~~~-~Df~G~~lslkl~~DG~Lg~Fe~SsGK~YdlVS~~aq~ 82 (224)
.|+|+.+|.--.- |-.+.. .+..|||||.+|.+-- ..+. +| .++..|.-..|+ -.|+.|.|.++..|+
T Consensus 4 ~F~pP~~y~K~~~--lk~f~~~~~~l~~KevWlIkaP~~~plskLk--~L--pv~~~g~~~~~~-~~g~~Y~v~ed~~~~ 76 (123)
T 3nfg_B 4 GYQPPSDYKQCKH--LKSFPVSELKGDNKELWLMKVPANIDISQLK--SL--PLDTDATVSTVE-LGSKNFNVLQNTSTQ 76 (123)
T ss_dssp CCCCCTTEEECCS--CBCCCGGGTTCTTEEEEEEEEETTCCGGGCS--EE--CCCTTCSEEEEE-ETTEEEEEEEGGGSS
T ss_pred cccCCCCcccccc--hhhcccccccCCCcEEEEEeCCCCCCHHHhc--cc--ccccCCCceeEE-ECCceeeeeeccccc
Confidence 6999999974331 222321 3678999999998863 4433 33 333335444466 469999998886653
Q ss_pred -----CCeeEEeeCC--CC-Cccc-------ceeeeEEEe
Q 027342 83 -----PDEMVFLNYP--SE-PKIV-------GKISRRVSL 107 (224)
Q Consensus 83 -----pdatvfvpS~--~e-~~iv-------gKIsRRVsL 107 (224)
-.-.|++|+. .+ ..++ -+|+|=.+|
T Consensus 77 ~~~d~sn~slL~p~~~~k~~l~~~~~~~~~~~~~dr~y~I 116 (123)
T 3nfg_B 77 EGSDNTNLSLLIPSEKKKETLKVATSKDNKSVYFDRVFTI 116 (123)
T ss_dssp TTSCCTTEEEEEECSSSTTCEEECBCTTSCBCCCSEEEEE
T ss_pred ccccccceEEEccccccCcceeecccccccCcceeeEEEE
Confidence 2346888884 22 2442 247776655
No 2
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=38.67 E-value=23 Score=27.43 Aligned_cols=118 Identities=17% Similarity=0.163 Sum_probs=64.7
Q ss_pred cccccCCCch--hhhcccCcccCCCCCCCceeEEEecCCCCC-CC--CCCceeEEeecCCcceeeeecCCCCeeeeeecc
Q 027342 5 IVEGYKPTEE--YEEELRDPLVDLSLIDSTELWLIQWPYKQM-PD--FDGKELSLELRGNGRLGSFEDSSGKAYDIVSND 79 (224)
Q Consensus 5 ~~~~YeP~~~--Fve~~~e~l~d~~ltDStELWLIQ~P~~~~-~D--f~G~~lslkl~~DG~Lg~Fe~SsGK~YdlVS~~ 79 (224)
....|+++.. |.......|..-+. ..-+++++.++.+.. +. -...++-+-+.+.|.+- -+|+.|.|.
T Consensus 16 ~~~~~~~~~~~p~~g~~~~~L~~~~~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~----v~g~~~~l~--- 87 (156)
T 3kgz_A 16 AVMPYKQTAEAPFQDVSRQLLFADPN-LACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCL----VGETISDVA--- 87 (156)
T ss_dssp CCEECCCCSSCSSEEEEEEEEECCTT-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEE----ETTEEEEEE---
T ss_pred chhhcccCCCCCcCCeEEEEEEcCCC-CcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEE----ECCEEEEeC---
Confidence 3445766552 55555555544332 233788887776653 11 12456766777766543 267788775
Q ss_pred CCCCCeeEEeeCCCCC--cccce-eeeEEEeee-------cCChhhhhccCCcccccccccccC
Q 027342 80 FQEPDEMVFLNYPSEP--KIVGK-ISRRVSLVH-------YPEPKEVEELNPDKIRQLHVTSSG 133 (224)
Q Consensus 80 aq~pdatvfvpS~~e~--~ivgK-IsRRVsLVr-------ypeP~Elek~~~~~~~~~~~~s~g 133 (224)
+...+|||+...= ...|. --+-++++- ||.|+||+.+.+...-..--.+.|
T Consensus 88 ---~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d~p~~~~~~~l~~L~~~~~~~~~~~~~~ 148 (156)
T 3kgz_A 88 ---QGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARDRPQLPTADDLAELRKDERIADFIRTGG 148 (156)
T ss_dssp ---TTCEEEECTTCCEEEECCSSSCEEEEEEEESSCCCCBCCCHHHHHHHHTSHHHHHHCCC--
T ss_pred ---CCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCCcccCCCHHHHHHHHhCcchhhhhhcCC
Confidence 4556788886632 22222 234556653 568999987665554433333333
No 3
>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1
Probab=32.97 E-value=32 Score=24.01 Aligned_cols=26 Identities=15% Similarity=0.164 Sum_probs=22.0
Q ss_pred cCCCCC--CCCCCceeEEeecCCcceee
Q 027342 39 WPYKQM--PDFDGKELSLELRGNGRLGS 64 (224)
Q Consensus 39 ~P~~~~--~Df~G~~lslkl~~DG~Lg~ 64 (224)
+|-+.. .||+..+|.|-.+.+|.+..
T Consensus 38 l~pg~~vT~Dfr~~RV~v~vD~~g~V~~ 65 (70)
T 1dwm_A 38 LKEGSAMTKDFRCDRVWVIVNDHGVVTS 65 (70)
T ss_dssp EETTCCCCCSCCTTEEEEEECTTSBBCS
T ss_pred ecCCCccCCccCCCeEEEEECCCCeEEe
Confidence 477775 99999999999999997754
No 4
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=31.80 E-value=1.3e+02 Score=23.47 Aligned_cols=115 Identities=15% Similarity=0.115 Sum_probs=61.3
Q ss_pred cCCCch--hhhcccCcccCCCCCCCceeEEEecCCCCC-CC--CCCceeEEeecCCcceeeeecCCCCeeeeeeccCCCC
Q 027342 9 YKPTEE--YEEELRDPLVDLSLIDSTELWLIQWPYKQM-PD--FDGKELSLELRGNGRLGSFEDSSGKAYDIVSNDFQEP 83 (224)
Q Consensus 9 YeP~~~--Fve~~~e~l~d~~ltDStELWLIQ~P~~~~-~D--f~G~~lslkl~~DG~Lg~Fe~SsGK~YdlVS~~aq~p 83 (224)
|+.+.. |.......|..-+. ..-++|++.++.+.. +- -...++.+-+.+.|.+-- +|+.|.|. +
T Consensus 29 ~~~~~~~p~~gv~~r~L~~~~~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v----~g~~~~l~------~ 97 (166)
T 3jzv_A 29 YKEEGSAPFRSVTRQVLFSGNG-LTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMV----GRAVSAVA------P 97 (166)
T ss_dssp CCCC-CCSCEEEEEEEEECCTT-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEE----TTEEEEEC------T
T ss_pred cccCCCcccCCeEEEEEECCCC-CeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE----CCEEEEeC------C
Confidence 554432 54444544543332 233788888776653 11 124577777777776532 67777763 4
Q ss_pred CeeEEeeCCCCCc--ccce-eeeEEEeee-------cCChhhhhccCCcc-cccccccccCC
Q 027342 84 DEMVFLNYPSEPK--IVGK-ISRRVSLVH-------YPEPKEVEELNPDK-IRQLHVTSSGA 134 (224)
Q Consensus 84 datvfvpS~~e~~--ivgK-IsRRVsLVr-------ypeP~Elek~~~~~-~~~~~~~s~gs 134 (224)
...||||....-. ..|. --+-++++- ||+++||+.+.... ..+--+..+|-
T Consensus 98 GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~~d~p~~p~~~~l~~l~~~~~~~~~~~~~~~~ 159 (166)
T 3jzv_A 98 YDLVTIPGWSWHQFRAPADEALGFLCMVNAERDKPQLPTEADLAMLRADDAVAAFLDGLAGE 159 (166)
T ss_dssp TCEEEECTTCCEEEECCTTSCEEEEEEEESSCCCCBCCCHHHHHHHHTSHHHHHHHTTCCC-
T ss_pred CCEEEECCCCcEEeEeCCCCCEEEEEEEccCCCCCCCCCHHHHHHHHhCcchhhhhcccccc
Confidence 5567888766321 1122 224455553 58899997755443 22333444554
No 5
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=28.13 E-value=8.5 Score=27.10 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=22.8
Q ss_pred EecCCCCCCCCCCceeEEeecCC----cceeeee
Q 027342 37 IQWPYKQMPDFDGKELSLELRGN----GRLGSFE 66 (224)
Q Consensus 37 IQ~P~~~~~Df~G~~lslkl~~D----G~Lg~Fe 66 (224)
|..|+..+..+-|++++|++.++ |.|-+|.
T Consensus 3 ~~~P~~~L~~~~g~~V~VeLk~g~~~~G~L~~~D 36 (75)
T 1d3b_A 3 IGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAE 36 (75)
T ss_dssp -CCHHHHHHHTTTSEEEEEETTSCEEEEEEEEEC
T ss_pred ccCHHHHHHHhCCCEEEEEECCCcEEEEEEEEEc
Confidence 45677777888999999999975 6666654
No 6
>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A
Probab=27.49 E-value=44 Score=23.42 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=21.8
Q ss_pred cCCCCC--CCCCCceeEEeecCCcceee
Q 027342 39 WPYKQM--PDFDGKELSLELRGNGRLGS 64 (224)
Q Consensus 39 ~P~~~~--~Df~G~~lslkl~~DG~Lg~ 64 (224)
+|.+.. .||+..+|.|-.|.+|.+..
T Consensus 37 l~~g~~vT~Dfr~~RV~V~vD~~g~V~~ 64 (69)
T 1mit_A 37 LEEGTPVTKDFRCNRVRIWVNKRGLVVS 64 (69)
T ss_dssp EETTCCCCSSCCTTEEEEEEETTTEEEC
T ss_pred ecCCCccCCCcCCCEEEEEECCCCcEEe
Confidence 367775 99999999999999997754
No 7
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=26.51 E-value=2.2e+02 Score=21.84 Aligned_cols=80 Identities=10% Similarity=0.188 Sum_probs=48.5
Q ss_pred ceeEEEecCCCCC-C-C-CCCceeEEeecCCcceeeeecCCCCeeeeeeccCCCCCeeEEeeCCCCC--cccc--eeeeE
Q 027342 32 TELWLIQWPYKQM-P-D-FDGKELSLELRGNGRLGSFEDSSGKAYDIVSNDFQEPDEMVFLNYPSEP--KIVG--KISRR 104 (224)
Q Consensus 32 tELWLIQ~P~~~~-~-D-f~G~~lslkl~~DG~Lg~Fe~SsGK~YdlVS~~aq~pdatvfvpS~~e~--~ivg--KIsRR 104 (224)
-+++++.+|.+.. + - -...++-+-+.+.|.+-- +|+.|.|. +...||||....- ...| .--+-
T Consensus 56 ~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i----~~~~~~l~------~Gd~i~ip~~~~H~~~n~~~~~~~~~ 125 (167)
T 3ibm_A 56 FETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL----DDRVEPLT------PLDCVYIAPHAWHQIHATGANEPLGF 125 (167)
T ss_dssp EEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE----TTEEEEEC------TTCEEEECTTCCEEEEEESSSCCEEE
T ss_pred EEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE----CCEEEEEC------CCCEEEECCCCcEEEEeCCCCCCEEE
Confidence 3788888887764 1 1 236778888887775532 57777763 4556777775532 1222 12234
Q ss_pred EEee-------ecCChhhhhccCC
Q 027342 105 VSLV-------HYPEPKEVEELNP 121 (224)
Q Consensus 105 VsLV-------rypeP~Elek~~~ 121 (224)
++++ .||+|+||+.+-+
T Consensus 126 l~i~~~~~d~p~~p~~~~~~~l~~ 149 (167)
T 3ibm_A 126 LCIVDSDRDRPQRPDADDLARMCA 149 (167)
T ss_dssp EEEEESSCCCCBCCCHHHHHHHTT
T ss_pred EEEEeCCcCcccCCCHHHHHHHHc
Confidence 4444 5678888876543
No 8
>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia}
Probab=24.76 E-value=56 Score=22.81 Aligned_cols=26 Identities=12% Similarity=0.109 Sum_probs=21.6
Q ss_pred cCCCCC--CCCCCceeEEeecCCcceee
Q 027342 39 WPYKQM--PDFDGKELSLELRGNGRLGS 64 (224)
Q Consensus 39 ~P~~~~--~Df~G~~lslkl~~DG~Lg~ 64 (224)
+|.+.. .||+..+|.|-.+.+|.+..
T Consensus 36 l~~g~~vT~Df~~~RV~v~vD~~g~V~~ 63 (68)
T 1vbw_A 36 IKVGSGATKDFRCDRVRVWVTERGIVAR 63 (68)
T ss_dssp EETTSCCCCSCCTTEEEEEECTTSBBCS
T ss_pred ecCCCccCCCcCCCEEEEEECCCCcEEe
Confidence 367775 99999999999999997654
No 9
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=24.49 E-value=18 Score=28.39 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=23.6
Q ss_pred EecCCCCCCCCCCceeEEeecCC----cceeeee
Q 027342 37 IQWPYKQMPDFDGKELSLELRGN----GRLGSFE 66 (224)
Q Consensus 37 IQ~P~~~~~Df~G~~lslkl~~D----G~Lg~Fe 66 (224)
|..|+..+..+-|+.++|+|.++ |.|-+|.
T Consensus 3 ~~~P~~~L~~~~gk~V~VeLknG~~~~G~L~~~D 36 (126)
T 2y9a_D 3 IGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAE 36 (126)
T ss_dssp -CCSHHHHHSCSSCEEEEEESSCCEEEEEEEEEC
T ss_pred cccHHHHHHHhCCCEEEEEECCCcEEEEEEEEEc
Confidence 46788888899999999999976 5666654
No 10
>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I
Probab=22.89 E-value=60 Score=23.64 Aligned_cols=26 Identities=8% Similarity=0.152 Sum_probs=21.8
Q ss_pred cCCCCC--CCCCCceeEEeecCCcceee
Q 027342 39 WPYKQM--PDFDGKELSLELRGNGRLGS 64 (224)
Q Consensus 39 ~P~~~~--~Df~G~~lslkl~~DG~Lg~ 64 (224)
+|.+.. .||+..+|.|-.+.+|.+..
T Consensus 51 l~~G~~VT~Dfr~dRV~V~vD~~g~V~~ 78 (83)
T 2ci2_I 51 LPVGTIVTMEYRIDRVRLFVDKLDNIAE 78 (83)
T ss_dssp EETTCCCCSCCCTTEEEEEECTTSBBCS
T ss_pred ecCCCccCCCcCCCEEEEEECCCCcEEe
Confidence 467775 99999999999999997754
No 11
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=22.71 E-value=2.3e+02 Score=22.85 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=31.6
Q ss_pred EecCCCCCCCC------CCceeEEeec--CCc--ceeeeecCC--CCeeeeeeccCCCCCeeEEeeCCCC
Q 027342 37 IQWPYKQMPDF------DGKELSLELR--GNG--RLGSFEDSS--GKAYDIVSNDFQEPDEMVFLNYPSE 94 (224)
Q Consensus 37 IQ~P~~~~~Df------~G~~lslkl~--~DG--~Lg~Fe~Ss--GK~YdlVS~~aq~pdatvfvpS~~e 94 (224)
||+| .|+..| .|..|++..+ .+| .|.=+-... +|.+.|+-+.. ...|.+|++..
T Consensus 18 ~~~~-~~~~GyVggFen~gdsVtf~VdVP~tG~YdLsI~Ya~~~G~k~n~L~VNG~---~~~V~fP~tt~ 83 (140)
T 2bgo_A 18 ITAP-AQLVGNVGELQGAGSAVIWNVDVPVTGEYRINLTWSSPYSSKVNTLVMDGT---ALSYAFAEATV 83 (140)
T ss_dssp EETT-CEECSSCEECCSTTCEEEEEECCCSSEEEEEEEEECCCSSEEEEEEEETTE---EEEEEEESCCS
T ss_pred EEcc-cEEeEeEccccCCCCEEEEEEecCCCcEEEEEEEeccCCCCceEEEEECCc---eeEEEECCcCC
Confidence 9999 665332 5666665554 677 444443333 45566666654 45788886554
No 12
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=21.01 E-value=2.7e+02 Score=24.12 Aligned_cols=64 Identities=13% Similarity=-0.064 Sum_probs=38.1
Q ss_pred CceeEEeecCCc-ceeeeecCCCCeeeeeeccCCCCCeeEEeeCCCCC-----cccceeeeEEEeeecCCh----hhhhc
Q 027342 49 GKELSLELRGNG-RLGSFEDSSGKAYDIVSNDFQEPDEMVFLNYPSEP-----KIVGKISRRVSLVHYPEP----KEVEE 118 (224)
Q Consensus 49 G~~lslkl~~DG-~Lg~Fe~SsGK~YdlVS~~aq~pdatvfvpS~~e~-----~ivgKIsRRVsLVrypeP----~Elek 118 (224)
...+.+=+-.++ ++++|.- .|..|-|..+. ..||+..++.. -.-.+|.++|.+-..|.| +|||-
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~-~~eGwGLt~Dg-----~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRY-SGEGWGLCYWN-----GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp SCEEEEEETTTTEEEEEEEC-SSCCCCEEEET-----TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred CCEEEEEECCcCcEEEEEeC-CCceeEEecCC-----CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE
Confidence 344544444555 6777774 46667776542 35677664321 113688999999885544 66654
No 13
>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ...
Probab=20.64 E-value=55 Score=22.59 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=21.5
Q ss_pred cCCCCC--CCCCCceeEEeecCCcceee
Q 027342 39 WPYKQM--PDFDGKELSLELRGNGRLGS 64 (224)
Q Consensus 39 ~P~~~~--~Df~G~~lslkl~~DG~Lg~ 64 (224)
+|.+.. .||+..++.|-.+.+|.+..
T Consensus 32 l~~g~~vT~Df~~~RV~v~vD~~g~V~~ 59 (64)
T 1to2_I 32 LPVGTIVTKEYRIDRVRLFVDRLDNIAQ 59 (64)
T ss_dssp EETTCEEECBCCTTEEEEEECTTSBBCS
T ss_pred ecCCCccCCCcCCCEEEEEECCCCeEEe
Confidence 366775 99999999999999997654
Done!