BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027344
         (224 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C0Y8|YKM6_SCHPO UPF0613 protein PB24D3.06c OS=Schizosaccharomyces pombe (strain 972
           / ATCC 24843) GN=SPAPB24D3.06c PE=3 SV=1
          Length = 316

 Score = 73.9 bits (180), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 4/91 (4%)

Query: 97  VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLIS 156
           ++F+GGL DG     Y++ L   LD+  WS+VQ    SSY G+GT SL++D  ++ + + 
Sbjct: 38  LLFVGGLGDGLLTVPYVQELVNPLDEIGWSIVQVQTQSSYIGWGTGSLKRDDEDLHKAVD 97

Query: 157 YLINKDNSE----GVVLLGHSTGCQDIVHYM 183
           Y ++   ++     +VL+GHSTG Q++++Y+
Sbjct: 98  YFLHIGGADFSTRKIVLMGHSTGSQNVLYYL 128


>sp|P38139|LDH1_YEAST Lipid droplet hydrolase 1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=LDH1 PE=1 SV=2
          Length = 375

 Score = 33.5 bits (75), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 26/120 (21%)

Query: 98  IFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD--AMEIDQLI 155
           +F+ GL       E  EPL   +D ++    +  +T    G+G SS   D   +++ +LI
Sbjct: 90  VFVPGLAGNL---EQFEPLLELVDSDQ----KAFLTLDLPGFGHSSEWSDYPMLKVVELI 142

Query: 156 SYLI-----------------NKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIF 198
             L+                 N  N   +VL+GHS GC    H    + A ++AV+  + 
Sbjct: 143 FVLVCDVLRKWSTAVPNNDNVNPFNGHKIVLVGHSMGCFLACHLYEQHMADTKAVQTLVL 202


>sp|P55086|PAR2_MOUSE Proteinase-activated receptor 2 OS=Mus musculus GN=F2rl1 PE=1 SV=1
          Length = 399

 Score = 31.2 bits (69), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 2/107 (1%)

Query: 29  SSSTSWFSGIRGCLNRSASCKVTSNSASGGQDMGGPVVMGKNQFRGVLFKYGPKPVQVAF 88
           S S +W  G    L  S SC  T N A G  +  G  ++G+ + +  +   G  PV+  F
Sbjct: 3   SLSLAWLLGGITLLAASVSCSRTENLAPGRNNSKGRSLIGRLETQPPITGKG-VPVEPGF 61

Query: 89  KTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSS 135
              ++    I  G LT  F    Y+    I L     +L  FL  + 
Sbjct: 62  SIDEFSAS-ILTGKLTTVFLPVVYIIVFVIGLPSNGMALWIFLFRTK 107


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.129    0.365 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,600,485
Number of Sequences: 539616
Number of extensions: 2886633
Number of successful extensions: 28947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 19314
Number of HSP's gapped (non-prelim): 5947
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)