Query 027345
Match_columns 224
No_of_seqs 292 out of 1763
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 14:02:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 6.4E-51 2.2E-55 340.9 22.0 198 23-223 1-200 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 4.8E-32 1.7E-36 251.4 15.3 153 61-219 288-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 6.4E-31 2.2E-35 245.5 17.9 154 60-219 322-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 3.4E-31 1.2E-35 245.7 14.8 147 67-219 295-443 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.4E-30 4.8E-35 241.9 15.3 148 67-220 294-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 3.3E-30 1.1E-34 241.1 13.8 154 60-219 358-514 (531)
7 2cav_A Protein (canavalin); vi 100.0 2.6E-29 8.9E-34 232.8 15.6 160 55-220 242-413 (445)
8 3c3v_A Arachin ARAH3 isoform; 100.0 1.1E-28 3.8E-33 231.2 17.8 148 67-220 344-493 (510)
9 1uij_A Beta subunit of beta co 100.0 5.6E-29 1.9E-33 228.9 15.5 159 55-219 210-383 (416)
10 1fxz_A Glycinin G1; proglycini 100.0 1.6E-28 5.5E-33 229.1 18.5 148 67-220 310-459 (476)
11 2d5f_A Glycinin A3B4 subunit; 100.0 1.1E-28 3.8E-33 230.9 14.8 154 60-220 331-485 (493)
12 2ea7_A 7S globulin-1; beta bar 100.0 2E-28 6.7E-33 226.3 15.8 161 53-219 225-399 (434)
13 3s7i_A Allergen ARA H 1, clone 99.9 1.3E-27 4.3E-32 219.8 13.8 156 58-219 226-408 (418)
14 1dgw_A Canavalin; duplicated s 99.9 1.1E-26 3.8E-31 190.7 14.5 151 58-219 2-167 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 1.8E-25 6E-30 204.3 13.8 148 62-220 213-372 (397)
16 2vqa_A SLL1358 protein, MNCA; 99.9 6.8E-24 2.3E-28 190.0 17.9 160 52-221 194-353 (361)
17 2e9q_A 11S globulin subunit be 99.9 2.1E-24 7.2E-29 200.4 13.2 141 74-221 43-237 (459)
18 2ea7_A 7S globulin-1; beta bar 99.9 5E-24 1.7E-28 196.9 14.2 152 57-217 20-185 (434)
19 2cav_A Protein (canavalin); vi 99.9 7.2E-24 2.5E-28 196.3 14.8 154 57-219 46-212 (445)
20 1uij_A Beta subunit of beta co 99.9 6E-24 2.1E-28 195.4 12.8 153 57-217 8-173 (416)
21 1fxz_A Glycinin G1; proglycini 99.9 1.4E-23 4.6E-28 195.9 12.4 140 74-221 28-229 (476)
22 3qac_A 11S globulin SEED stora 99.9 2.1E-23 7.1E-28 193.5 13.1 139 74-219 30-237 (465)
23 3ksc_A LEGA class, prolegumin; 99.9 3.1E-23 1.1E-27 193.7 13.3 136 75-217 27-214 (496)
24 2phl_A Phaseolin; plant SEED s 99.9 2.8E-23 9.6E-28 189.8 12.5 152 57-217 11-181 (397)
25 3s7i_A Allergen ARA H 1, clone 99.9 5.4E-23 1.8E-27 189.0 13.2 135 74-218 20-169 (418)
26 2d5f_A Glycinin A3B4 subunit; 99.9 2.1E-22 7.3E-27 188.4 12.5 141 76-221 27-232 (493)
27 3kgl_A Cruciferin; 11S SEED gl 99.9 4.8E-22 1.6E-26 184.5 12.1 141 74-219 23-245 (466)
28 3c3v_A Arachin ARAH3 isoform; 99.9 5.7E-22 2E-26 185.8 12.2 140 75-219 29-269 (510)
29 3fz3_A Prunin; TREE NUT allerg 99.9 1.7E-21 5.8E-26 182.3 12.0 141 74-219 28-297 (531)
30 2vqa_A SLL1358 protein, MNCA; 99.8 1.9E-20 6.6E-25 167.6 17.1 150 59-219 20-172 (361)
31 1j58_A YVRK protein; cupin, de 99.8 3.2E-19 1.1E-23 161.2 18.2 155 55-220 221-375 (385)
32 1j58_A YVRK protein; cupin, de 99.8 5.1E-19 1.7E-23 159.9 12.6 146 60-218 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 1.6E-19 5.4E-24 129.9 5.4 73 62-135 4-76 (79)
34 3h8u_A Uncharacterized conserv 99.6 1.1E-14 3.8E-19 110.9 10.7 84 94-184 38-121 (125)
35 1lr5_A Auxin binding protein 1 99.5 4.9E-14 1.7E-18 112.7 11.9 117 94-215 40-158 (163)
36 2xlg_A SLL1785 protein, CUCA; 99.5 2.8E-14 9.6E-19 122.2 9.6 118 55-176 7-137 (239)
37 3l2h_A Putative sugar phosphat 99.5 7.9E-14 2.7E-18 111.3 11.6 85 94-186 45-131 (162)
38 2fqp_A Hypothetical protein BP 99.5 6.7E-14 2.3E-18 102.7 9.0 77 94-176 17-93 (97)
39 1v70_A Probable antibiotics sy 99.5 1.3E-13 4.6E-18 100.2 9.9 78 92-177 25-102 (105)
40 3ibm_A Cupin 2, conserved barr 99.5 7.9E-13 2.7E-17 106.9 14.3 117 53-179 12-132 (167)
41 2oa2_A BH2720 protein; 1017534 99.5 5.5E-13 1.9E-17 105.1 12.5 85 93-179 41-125 (148)
42 3i7d_A Sugar phosphate isomera 99.5 4.3E-13 1.5E-17 107.9 11.1 85 93-185 41-128 (163)
43 3es1_A Cupin 2, conserved barr 99.4 3.9E-13 1.3E-17 109.7 10.2 80 93-181 77-156 (172)
44 3ht1_A REMF protein; cupin fol 99.4 6.4E-13 2.2E-17 103.0 10.6 82 93-183 37-120 (145)
45 2gu9_A Tetracenomycin polyketi 99.4 7.2E-13 2.5E-17 98.0 10.3 78 93-178 19-98 (113)
46 1x82_A Glucose-6-phosphate iso 99.4 2.5E-12 8.6E-17 106.0 14.2 84 93-179 65-156 (190)
47 3fjs_A Uncharacterized protein 99.4 5.1E-13 1.7E-17 101.2 8.7 76 92-176 33-108 (114)
48 3lag_A Uncharacterized protein 99.4 1.5E-13 5.3E-18 101.9 4.9 79 92-175 14-92 (98)
49 3kgz_A Cupin 2 conserved barre 99.4 1.1E-12 3.8E-17 105.1 10.2 78 93-179 42-119 (156)
50 4e2g_A Cupin 2 conserved barre 99.4 8.7E-13 3E-17 100.3 8.9 77 93-179 39-115 (126)
51 2bnm_A Epoxidase; oxidoreducta 99.4 2.3E-12 7.7E-17 105.6 12.0 82 90-176 112-197 (198)
52 1o4t_A Putative oxalate decarb 99.4 1.5E-12 5.3E-17 100.9 10.0 77 92-176 54-130 (133)
53 2b8m_A Hypothetical protein MJ 99.4 2.5E-12 8.5E-17 96.8 10.8 74 94-176 26-100 (117)
54 3jzv_A Uncharacterized protein 99.4 1.5E-12 5.2E-17 105.4 9.8 78 93-179 51-128 (166)
55 2f4p_A Hypothetical protein TM 99.4 5.1E-12 1.7E-16 99.8 11.4 78 93-179 46-124 (147)
56 2pfw_A Cupin 2, conserved barr 99.4 3.6E-12 1.2E-16 95.4 9.4 75 94-179 33-107 (116)
57 4i4a_A Similar to unknown prot 99.3 7.5E-12 2.6E-16 95.3 11.3 75 93-176 32-106 (128)
58 1vj2_A Novel manganese-contain 99.3 2.8E-12 9.7E-17 98.3 8.8 77 92-177 45-121 (126)
59 2o8q_A Hypothetical protein; c 99.3 5.8E-12 2E-16 96.9 9.7 79 95-181 43-121 (134)
60 3cew_A Uncharacterized cupin p 99.3 6.3E-12 2.2E-16 95.7 9.4 79 92-178 23-102 (125)
61 2vpv_A Protein MIF2, MIF2P; nu 99.3 6.2E-12 2.1E-16 102.0 9.6 75 94-176 87-162 (166)
62 1yhf_A Hypothetical protein SP 99.3 1E-11 3.5E-16 92.7 10.0 73 93-176 38-110 (115)
63 1y9q_A Transcriptional regulat 99.3 7.2E-12 2.5E-16 102.3 9.8 77 91-177 100-178 (192)
64 2ozi_A Hypothetical protein RP 99.3 2.3E-12 7.9E-17 95.7 6.0 78 94-176 16-93 (98)
65 1rc6_A Hypothetical protein YL 99.3 8.3E-12 2.8E-16 107.2 9.7 78 92-177 176-254 (261)
66 3h7j_A Bacilysin biosynthesis 99.3 1.2E-11 4.3E-16 105.2 9.3 79 94-181 144-223 (243)
67 2ozj_A Cupin 2, conserved barr 99.2 4.1E-11 1.4E-15 89.6 10.2 72 94-176 37-108 (114)
68 2q30_A Uncharacterized protein 99.2 3.6E-11 1.2E-15 88.7 9.5 76 93-177 31-107 (110)
69 1sef_A Conserved hypothetical 99.2 7.6E-11 2.6E-15 102.0 12.3 108 56-176 146-256 (274)
70 1y3t_A Hypothetical protein YX 99.2 5.3E-11 1.8E-15 104.6 10.4 78 93-179 44-121 (337)
71 2d40_A Z3393, putative gentisa 99.2 1.3E-10 4.4E-15 104.5 11.3 77 93-177 98-174 (354)
72 3lwc_A Uncharacterized protein 99.2 9.7E-11 3.3E-15 89.7 8.8 73 94-177 39-111 (119)
73 3h7j_A Bacilysin biosynthesis 99.2 7.5E-11 2.6E-15 100.3 8.8 74 95-177 34-108 (243)
74 1juh_A Quercetin 2,3-dioxygena 99.2 2.7E-10 9.1E-15 102.1 12.7 80 94-178 47-129 (350)
75 2d40_A Z3393, putative gentisa 99.1 2.2E-10 7.4E-15 103.0 11.6 90 75-177 249-339 (354)
76 1sfn_A Conserved hypothetical 99.1 3.5E-10 1.2E-14 96.5 12.2 77 92-177 162-239 (246)
77 1sq4_A GLXB, glyoxylate-induce 99.1 1E-10 3.6E-15 101.7 9.1 77 92-177 65-143 (278)
78 2i45_A Hypothetical protein; n 99.1 9E-11 3.1E-15 86.9 7.2 69 97-175 30-98 (107)
79 1rc6_A Hypothetical protein YL 99.1 1.6E-10 5.4E-15 99.2 8.8 77 93-177 57-134 (261)
80 3d82_A Cupin 2, conserved barr 99.1 1.1E-10 3.9E-15 84.8 6.8 70 91-174 29-98 (102)
81 1y3t_A Hypothetical protein YX 99.1 3.7E-10 1.3E-14 99.1 11.2 75 97-180 219-294 (337)
82 2opk_A Hypothetical protein; p 99.1 3.9E-10 1.3E-14 85.0 9.3 78 92-177 28-109 (112)
83 2pyt_A Ethanolamine utilizatio 99.1 2E-10 6.9E-15 89.6 7.7 71 94-177 56-126 (133)
84 3rns_A Cupin 2 conserved barre 99.1 3.7E-10 1.3E-14 95.1 9.2 72 94-175 152-223 (227)
85 1sef_A Conserved hypothetical 99.1 3E-10 1E-14 98.2 8.8 76 93-176 60-136 (274)
86 4b29_A Dimethylsulfoniopropion 99.1 3.9E-10 1.3E-14 94.7 9.1 77 92-177 129-205 (217)
87 4e2q_A Ureidoglycine aminohydr 99.1 3.4E-10 1.2E-14 98.2 8.1 103 53-176 38-141 (266)
88 3bu7_A Gentisate 1,2-dioxygena 99.0 9.2E-10 3.2E-14 100.3 11.1 78 92-177 120-198 (394)
89 3rns_A Cupin 2 conserved barre 99.0 9.1E-10 3.1E-14 92.7 10.2 73 94-177 36-108 (227)
90 4e2q_A Ureidoglycine aminohydr 99.0 4.9E-09 1.7E-13 90.9 14.9 75 92-175 183-258 (266)
91 3nw4_A Gentisate 1,2-dioxygena 99.0 5.7E-10 1.9E-14 100.8 9.0 78 93-178 101-178 (368)
92 1sq4_A GLXB, glyoxylate-induce 99.0 1.3E-09 4.5E-14 94.7 10.9 82 87-177 183-265 (278)
93 4h7l_A Uncharacterized protein 99.0 9.6E-10 3.3E-14 88.2 9.1 71 94-178 46-118 (157)
94 3bu7_A Gentisate 1,2-dioxygena 99.0 3.3E-09 1.1E-13 96.6 13.6 92 76-177 276-368 (394)
95 4axo_A EUTQ, ethanolamine util 99.0 1.9E-09 6.5E-14 86.1 8.5 72 94-178 65-136 (151)
96 1vr3_A Acireductone dioxygenas 98.9 1.1E-08 3.8E-13 84.6 12.7 84 96-184 75-168 (191)
97 1o5u_A Novel thermotoga mariti 98.9 4.8E-09 1.7E-13 78.0 6.8 62 99-170 35-96 (101)
98 2q1z_B Anti-sigma factor CHRR, 98.8 1.4E-08 4.9E-13 83.9 9.4 70 95-177 125-194 (195)
99 1sfn_A Conserved hypothetical 98.8 1.3E-08 4.3E-13 86.8 8.3 71 93-176 48-118 (246)
100 3ebr_A Uncharacterized RMLC-li 98.8 1.9E-08 6.5E-13 80.8 8.4 73 94-177 41-115 (159)
101 3bcw_A Uncharacterized protein 98.7 1.7E-08 5.8E-13 77.7 6.6 67 94-169 48-114 (123)
102 1yfu_A 3-hydroxyanthranilate-3 98.7 1E-07 3.5E-12 77.3 11.2 69 92-166 33-101 (174)
103 1zrr_A E-2/E-2' protein; nicke 98.7 1.2E-08 4E-13 83.6 5.4 70 108-183 93-162 (179)
104 1dgw_Y Canavalin; duplicated s 98.7 1.4E-07 4.8E-12 69.3 10.0 75 140-219 4-82 (93)
105 1juh_A Quercetin 2,3-dioxygena 98.7 7E-08 2.4E-12 86.4 10.2 81 88-177 242-325 (350)
106 2o1q_A Putative acetyl/propion 98.7 1.1E-08 3.9E-13 80.6 4.5 77 94-179 43-120 (145)
107 3cjx_A Protein of unknown func 98.7 6E-08 2.1E-12 78.4 8.0 74 94-177 42-117 (165)
108 2y0o_A Probable D-lyxose ketol 98.6 7.6E-08 2.6E-12 78.4 8.3 84 95-180 53-155 (175)
109 3eqe_A Putative cystein deoxyg 98.6 9.6E-07 3.3E-11 71.7 13.7 86 94-181 68-156 (171)
110 3st7_A Capsular polysaccharide 98.5 4.2E-07 1.5E-11 80.3 10.9 85 96-184 273-365 (369)
111 3nw4_A Gentisate 1,2-dioxygena 98.5 1.1E-06 3.6E-11 79.4 12.4 88 76-176 260-349 (368)
112 3d0j_A Uncharacterized protein 98.5 4.6E-07 1.6E-11 71.0 7.7 79 96-176 26-108 (140)
113 1zvf_A 3-hydroxyanthranilate 3 98.4 1E-06 3.4E-11 71.5 9.4 62 102-165 41-103 (176)
114 3o14_A Anti-ecfsigma factor, C 98.4 1.3E-06 4.4E-11 73.8 10.1 73 94-181 42-114 (223)
115 2gm6_A Cysteine dioxygenase ty 98.4 4E-06 1.4E-10 70.0 12.7 84 94-178 78-167 (208)
116 2arc_A ARAC, arabinose operon 98.4 2.8E-06 9.5E-11 66.0 10.3 59 109-176 32-91 (164)
117 3bal_A Acetylacetone-cleaving 98.3 1E-06 3.6E-11 70.3 6.7 90 75-177 31-120 (153)
118 2qnk_A 3-hydroxyanthranilate 3 98.2 4.5E-06 1.6E-10 72.3 9.3 73 103-182 39-111 (286)
119 3eln_A Cysteine dioxygenase ty 98.2 2.7E-05 9.1E-10 64.6 13.3 89 94-182 69-163 (200)
120 3myx_A Uncharacterized protein 98.0 5.4E-05 1.8E-09 64.4 11.0 72 94-177 46-117 (238)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.9 4.9E-05 1.7E-09 59.7 9.5 71 100-175 40-111 (141)
122 3ejk_A DTDP sugar isomerase; Y 97.9 0.00014 4.9E-09 59.0 11.2 76 102-177 60-141 (174)
123 3uss_A Putative uncharacterize 97.8 0.00056 1.9E-08 57.1 13.9 85 94-180 72-163 (211)
124 3es4_A Uncharacterized protein 97.7 0.00018 6E-09 54.7 8.4 63 95-166 42-104 (116)
125 3myx_A Uncharacterized protein 97.5 0.0006 2E-08 57.9 9.7 63 94-165 166-228 (238)
126 3gbg_A TCP pilus virulence reg 97.5 0.00045 1.5E-08 58.4 8.8 73 94-173 6-82 (276)
127 1yud_A Hypothetical protein SO 97.3 0.0066 2.3E-07 48.9 13.1 132 73-217 26-165 (170)
128 3o14_A Anti-ecfsigma factor, C 97.2 0.00083 2.8E-08 56.4 7.3 78 75-174 133-210 (223)
129 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.2 0.0026 8.9E-08 52.0 9.8 72 103-175 56-134 (185)
130 2vec_A YHAK, pirin-like protei 97.1 0.0027 9.2E-08 54.4 9.9 72 97-175 66-140 (256)
131 2ixk_A DTDP-4-dehydrorhamnose 97.1 0.0036 1.2E-07 51.1 9.8 72 103-175 57-135 (184)
132 3ryk_A DTDP-4-dehydrorhamnose 97.0 0.0058 2E-07 50.7 10.2 70 103-173 78-155 (205)
133 1vrb_A Putative asparaginyl hy 96.9 0.0071 2.4E-07 53.7 11.0 74 100-174 145-250 (342)
134 3kmh_A D-lyxose isomerase; cup 96.9 0.0064 2.2E-07 51.4 9.8 84 95-178 106-208 (246)
135 1tq5_A Protein YHHW; bicupin, 96.8 0.0068 2.3E-07 51.4 9.8 72 96-174 42-116 (242)
136 4gjz_A Lysine-specific demethy 96.8 0.0034 1.2E-07 51.3 7.7 69 98-167 126-226 (235)
137 1dzr_A DTDP-4-dehydrorhamnose 96.8 0.0088 3E-07 48.7 9.8 71 103-174 55-133 (183)
138 3bb6_A Uncharacterized protein 96.7 0.011 3.8E-07 45.3 9.0 71 103-176 22-98 (127)
139 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.7 0.0064 2.2E-07 50.1 8.2 71 103-176 68-142 (197)
140 1wlt_A 176AA long hypothetical 96.6 0.021 7.1E-07 47.0 10.9 70 103-173 73-150 (196)
141 2c0z_A NOVW; isomerase, epimer 96.4 0.018 6E-07 48.2 9.2 70 103-173 63-140 (216)
142 1oi6_A PCZA361.16; epimerase, 96.3 0.036 1.2E-06 45.8 10.9 71 103-174 55-133 (205)
143 3d8c_A Hypoxia-inducible facto 96.3 0.017 5.7E-07 51.4 9.4 75 100-175 187-295 (349)
144 1upi_A DTDP-4-dehydrorhamnose 96.2 0.053 1.8E-06 45.5 11.4 70 103-173 74-151 (225)
145 4hn1_A Putative 3-epimerase in 96.2 0.042 1.4E-06 45.3 10.2 71 103-173 52-130 (201)
146 2xdv_A MYC-induced nuclear ant 95.9 0.056 1.9E-06 49.6 10.8 68 98-166 141-223 (442)
147 3al5_A HTYW5, JMJC domain-cont 95.8 0.032 1.1E-06 49.2 8.4 74 99-175 170-271 (338)
148 4diq_A Lysine-specific demethy 95.7 0.084 2.9E-06 49.1 11.2 75 98-173 166-259 (489)
149 1e5r_A Proline oxidase; oxidor 95.6 0.012 4.2E-07 51.2 5.1 75 95-173 91-171 (290)
150 2qdr_A Uncharacterized protein 95.6 0.043 1.5E-06 47.1 8.1 72 92-176 88-160 (303)
151 3k2o_A Bifunctional arginine d 94.9 0.1 3.5E-06 46.2 8.9 71 100-170 176-284 (336)
152 2qjv_A Uncharacterized IOLB-li 94.9 0.37 1.3E-05 41.4 12.0 81 94-178 152-247 (270)
153 2p17_A Pirin-like protein; GK1 94.7 0.23 8E-06 42.6 10.2 79 101-187 45-133 (277)
154 2qnk_A 3-hydroxyanthranilate 3 94.6 0.088 3E-06 45.5 7.2 59 102-170 214-272 (286)
155 2yu1_A JMJC domain-containing 94.6 0.073 2.5E-06 49.0 7.2 78 103-180 204-304 (451)
156 3kv5_D JMJC domain-containing 94.4 0.071 2.4E-06 49.6 6.7 65 103-167 274-361 (488)
157 3rcq_A Aspartyl/asparaginyl be 94.4 0.12 4E-06 42.5 7.3 89 84-181 90-184 (197)
158 1eyb_A Homogentisate 1,2-dioxy 94.3 0.16 5.3E-06 46.9 8.7 57 108-174 170-226 (471)
159 1j1l_A Pirin; beta sandwich, c 94.0 0.36 1.2E-05 41.8 10.1 102 76-187 21-135 (290)
160 3kv4_A PHD finger protein 8; e 94.0 0.16 5.4E-06 46.7 8.2 66 103-168 239-327 (447)
161 3k3o_A PHF8, PHD finger protei 93.6 0.12 4.1E-06 46.4 6.4 65 103-167 155-242 (371)
162 3kv9_A JMJC domain-containing 92.9 0.19 6.6E-06 45.5 6.7 68 100-167 179-270 (397)
163 1xru_A 4-deoxy-L-threo-5-hexos 92.7 1.2 4.1E-05 38.4 11.0 82 93-180 178-266 (282)
164 3pua_A GRC5, PHD finger protei 92.5 0.24 8.1E-06 44.8 6.7 65 103-167 182-269 (392)
165 1pmi_A PMI, phosphomannose iso 92.1 0.55 1.9E-05 43.0 8.7 77 94-176 356-437 (440)
166 2rg4_A Uncharacterized protein 92.0 0.4 1.4E-05 39.5 7.1 76 96-173 104-201 (216)
167 1ywk_A 4-deoxy-L-threo-5-hexos 91.2 0.91 3.1E-05 39.3 8.6 82 93-180 178-266 (289)
168 3pur_A Lysine-specific demethy 90.8 0.3 1E-05 45.7 5.5 65 103-167 304-391 (528)
169 2oyz_A UPF0345 protein VPA0057 90.3 1.5 5.3E-05 31.6 7.9 63 102-175 30-92 (94)
170 1qwr_A Mannose-6-phosphate iso 89.6 1.1 3.9E-05 39.0 8.0 57 94-161 250-306 (319)
171 2wfp_A Mannose-6-phosphate iso 89.1 0.54 1.9E-05 42.4 5.7 57 94-161 323-379 (394)
172 3hqx_A UPF0345 protein aciad03 88.5 2.6 8.9E-05 31.3 8.1 67 101-176 43-109 (111)
173 2pqq_A Putative transcriptiona 87.6 1.5 5.2E-05 31.9 6.5 52 98-152 29-80 (149)
174 1tq5_A Protein YHHW; bicupin, 86.6 5 0.00017 33.5 9.9 68 93-174 158-225 (242)
175 3dl3_A Tellurite resistance pr 86.4 3.6 0.00012 30.9 7.9 65 106-174 27-94 (119)
176 2ypd_A Probable JMJC domain-co 86.3 0.81 2.8E-05 41.2 5.0 42 139-180 290-331 (392)
177 3mdp_A Cyclic nucleotide-bindi 85.7 1.5 5.1E-05 31.7 5.5 54 97-153 29-85 (142)
178 1zx5_A Mannosephosphate isomer 85.7 3.3 0.00011 35.7 8.5 56 94-162 229-285 (300)
179 3dn7_A Cyclic nucleotide bindi 85.4 3 0.0001 32.1 7.5 53 98-153 31-83 (194)
180 2vec_A YHAK, pirin-like protei 85.2 5.7 0.0002 33.5 9.6 71 93-173 180-250 (256)
181 2oz6_A Virulence factor regula 85.0 3.1 0.00011 32.2 7.5 53 98-153 14-66 (207)
182 3m3i_A Putative uncharacterize 84.2 17 0.00057 30.2 12.9 135 73-218 33-211 (225)
183 4ev0_A Transcription regulator 84.0 3.1 0.00011 32.4 7.1 119 98-221 23-188 (216)
184 3ryp_A Catabolite gene activat 83.8 3.8 0.00013 31.8 7.5 119 98-221 20-192 (210)
185 3fx3_A Cyclic nucleotide-bindi 83.6 3.4 0.00012 32.9 7.3 52 98-152 35-86 (237)
186 3e97_A Transcriptional regulat 83.5 3.5 0.00012 32.6 7.3 53 97-152 29-81 (231)
187 3iwz_A CAP-like, catabolite ac 83.1 3.6 0.00012 32.4 7.2 53 98-153 35-87 (230)
188 3d0s_A Transcriptional regulat 83.0 3.9 0.00013 32.2 7.4 116 99-221 31-202 (227)
189 3gyd_A CNMP-BD protein, cyclic 82.8 3.6 0.00012 31.9 7.0 53 97-152 62-114 (187)
190 3idb_B CAMP-dependent protein 82.5 4.5 0.00016 30.1 7.2 52 97-152 61-112 (161)
191 1zyb_A Transcription regulator 81.9 3.2 0.00011 33.2 6.5 120 97-221 43-211 (232)
192 3b02_A Transcriptional regulat 81.8 3.5 0.00012 31.9 6.5 50 101-153 3-52 (195)
193 3loi_A Putative uncharacterize 81.6 18 0.00062 28.7 15.1 129 73-217 24-168 (172)
194 2z69_A DNR protein; beta barre 81.4 1.4 4.7E-05 32.4 3.8 53 97-152 35-87 (154)
195 1znp_A Hypothetical protein AT 81.4 17 0.0006 28.3 12.4 90 73-166 19-115 (154)
196 3eo6_A Protein of unknown func 80.9 3 0.0001 30.8 5.3 54 102-164 43-96 (106)
197 3kcc_A Catabolite gene activat 80.7 5.1 0.00017 32.7 7.4 119 98-221 70-242 (260)
198 1ft9_A Carbon monoxide oxidati 80.1 10 0.00036 29.7 9.0 117 97-221 23-188 (222)
199 3la7_A Global nitrogen regulat 79.8 5 0.00017 32.3 7.0 123 94-221 40-218 (243)
200 2gau_A Transcriptional regulat 79.8 3 0.0001 33.0 5.6 120 97-221 33-205 (232)
201 1zx5_A Mannosephosphate isomer 79.7 1.3 4.5E-05 38.3 3.6 47 117-163 118-179 (300)
202 1j1l_A Pirin; beta sandwich, c 79.7 10 0.00035 32.5 9.2 78 92-177 166-243 (290)
203 1o5l_A Transcriptional regulat 79.4 3.6 0.00012 32.4 5.9 53 97-152 22-74 (213)
204 2fmy_A COOA, carbon monoxide o 79.4 14 0.00047 28.8 9.4 116 98-221 28-192 (220)
205 3dv8_A Transcriptional regulat 79.0 5.5 0.00019 31.1 6.9 119 98-221 27-194 (220)
206 2p17_A Pirin-like protein; GK1 79.0 8.7 0.0003 32.7 8.5 71 93-175 165-240 (277)
207 2zcw_A TTHA1359, transcription 78.5 4.5 0.00016 31.3 6.2 116 100-221 8-171 (202)
208 3e6c_C CPRK, cyclic nucleotide 78.4 5.4 0.00018 32.1 6.8 119 98-221 33-202 (250)
209 1qwr_A Mannose-6-phosphate iso 78.1 1.6 5.4E-05 38.1 3.6 58 105-162 93-178 (319)
210 2qjv_A Uncharacterized IOLB-li 75.5 25 0.00086 29.9 10.3 67 95-173 29-106 (270)
211 2bgc_A PRFA; bacterial infecti 73.6 9 0.00031 30.5 6.9 118 99-221 20-195 (238)
212 2wfp_A Mannose-6-phosphate iso 72.8 2.8 9.7E-05 37.6 3.9 24 140-163 238-261 (394)
213 2ptm_A Hyperpolarization-activ 70.8 8.6 0.00029 29.7 6.0 49 97-152 94-142 (198)
214 2qcs_B CAMP-dependent protein 69.1 15 0.00053 29.8 7.5 54 97-152 180-233 (291)
215 3bpz_A Potassium/sodium hyperp 66.9 6.5 0.00022 30.6 4.5 48 97-152 95-142 (202)
216 4ava_A Lysine acetyltransferas 66.5 12 0.0004 31.5 6.3 51 98-152 37-87 (333)
217 4f8a_A Potassium voltage-gated 65.6 10 0.00035 27.7 5.2 48 98-153 51-98 (160)
218 3pna_A CAMP-dependent protein 65.0 10 0.00036 27.8 5.1 48 97-152 61-108 (154)
219 2xxz_A Lysine-specific demethy 64.9 8.9 0.00031 33.7 5.3 34 140-173 277-310 (332)
220 3tnp_B CAMP-dependent protein 62.4 22 0.00074 31.5 7.5 52 97-152 168-219 (416)
221 1pmi_A PMI, phosphomannose iso 62.3 6.2 0.00021 36.0 3.9 23 141-163 265-287 (440)
222 3shr_A CGMP-dependent protein 61.2 17 0.00058 29.8 6.3 52 98-152 181-233 (299)
223 3dkw_A DNR protein; CRP-FNR, H 61.1 3 0.0001 32.8 1.4 119 98-221 33-203 (227)
224 3ocp_A PRKG1 protein; serine/t 60.4 14 0.00049 26.4 5.1 47 98-152 47-93 (139)
225 2bdr_A Ureidoglycolate hydrola 58.7 23 0.00079 28.1 6.3 67 108-174 71-140 (175)
226 1vp6_A CNBD, cyclic-nucleotide 58.2 11 0.00038 26.8 4.1 45 98-152 35-79 (138)
227 3ukn_A Novel protein similar t 57.3 12 0.00041 29.2 4.5 49 97-153 98-146 (212)
228 2d93_A RAP guanine nucleotide 56.8 15 0.00051 26.2 4.6 47 98-152 40-87 (134)
229 1xsq_A Ureidoglycolate hydrola 56.8 18 0.00061 28.6 5.3 67 109-175 70-139 (168)
230 3of1_A CAMP-dependent protein 54.4 13 0.00043 29.3 4.2 47 98-152 31-77 (246)
231 1o7f_A CAMP-dependent RAP1 gua 54.0 23 0.0008 31.2 6.2 57 97-154 65-121 (469)
232 3avr_A Lysine-specific demethy 53.1 20 0.00069 33.5 5.8 87 83-173 252-369 (531)
233 4f7z_A RAP guanine nucleotide 52.7 30 0.001 34.2 7.3 57 96-153 64-120 (999)
234 1ywk_A 4-deoxy-L-threo-5-hexos 49.8 1.2E+02 0.0042 25.9 10.2 66 100-173 62-130 (289)
235 3of1_A CAMP-dependent protein 49.6 28 0.00096 27.2 5.5 48 98-152 149-196 (246)
236 4ask_A Lysine-specific demethy 47.7 28 0.00097 32.3 5.8 91 79-173 223-344 (510)
237 2qcs_B CAMP-dependent protein 47.2 24 0.00081 28.7 4.8 48 97-152 62-109 (291)
238 3g7d_A PHPD; non heme Fe(II) d 44.8 1.7E+02 0.0057 26.0 11.9 77 79-163 320-397 (443)
239 1s4c_A Protein HI0227; double- 42.8 51 0.0017 25.1 5.8 55 108-162 60-132 (155)
240 3shr_A CGMP-dependent protein 41.3 28 0.00096 28.5 4.4 48 97-152 62-109 (299)
241 1wgp_A Probable cyclic nucleot 40.2 4.9 0.00017 28.8 -0.5 49 100-152 32-82 (137)
242 4din_B CAMP-dependent protein 40.1 44 0.0015 28.9 5.7 51 100-152 274-324 (381)
243 1xru_A 4-deoxy-L-threo-5-hexos 38.6 45 0.0015 28.5 5.3 50 116-173 78-130 (282)
244 3tnp_B CAMP-dependent protein 38.2 43 0.0015 29.5 5.4 55 97-152 290-348 (416)
245 1yll_A PA5104, conserved hypot 37.2 38 0.0013 27.4 4.4 87 57-157 88-174 (200)
246 4din_B CAMP-dependent protein 28.7 35 0.0012 29.6 3.0 48 97-152 153-200 (381)
247 1o7f_A CAMP-dependent RAP1 gua 28.5 85 0.0029 27.4 5.7 46 100-152 364-409 (469)
248 1xe7_A YML079WP, hypothetical 27.6 2.4E+02 0.0083 22.7 13.4 109 96-218 80-199 (203)
249 3g7d_A PHPD; non heme Fe(II) d 25.0 2.2E+02 0.0076 25.2 7.3 74 143-217 156-264 (443)
250 3nnf_A CURA; non-HAEM Fe(II)/a 24.6 75 0.0026 27.8 4.3 22 142-163 234-255 (344)
251 2qn4_A RASI, alpha-amylase/sub 24.0 21 0.0007 29.0 0.6 29 1-30 1-29 (200)
252 1tc3_C Protein (TC3 transposas 22.6 79 0.0027 17.6 3.1 26 196-221 21-46 (51)
253 2a1x_A Phytanoyl-COA dioxygena 22.5 80 0.0027 26.2 4.1 31 140-170 214-245 (308)
254 1eyb_A Homogentisate 1,2-dioxy 21.5 1E+02 0.0035 28.3 4.7 51 99-161 347-398 (471)
255 2opw_A Phyhd1 protein; double- 21.4 73 0.0025 26.1 3.6 30 140-169 226-256 (291)
256 1pcq_O Groes protein; chaperon 21.1 2.1E+02 0.0072 20.2 5.5 20 139-158 52-71 (97)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=6.4e-51 Score=340.88 Aligned_cols=198 Identities=48% Similarity=0.818 Sum_probs=185.8
Q ss_pred cCCCCCcceEeecCCCCCc-ceecCcccCCCCCCCCCCeeeec-CCCCCCccCCCCceEEEecccCCCCCCccceEEEEE
Q 027345 23 YDPSPLQDICVAINDPKDG-VFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRI 100 (224)
Q Consensus 23 ~d~~~~~dfcv~~~~~~~~-~~~~g~~ck~~~~~~~~df~~~~-~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v 100 (224)
+||||||||||| |++++ +++|||+|| |+.++++||+|++ +++++++.+..|+.++.++..++|+++++++++.++
T Consensus 1 ~~~~~~~d~c~~--~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~ 77 (201)
T 1fi2_A 1 TDPDPLQDFCVA--DLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRV 77 (201)
T ss_dssp CCCCCSSSCCCB--CCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEE
T ss_pred CCCcccceeEEe--cCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEE
Confidence 699999999999 98988 999999999 9999999999999 999999888999999999999999999999999999
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCC
Q 027345 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQF 180 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~ 180 (224)
+++||+..++|||++++|++||++|++++++.+.++++++++++.|++||+++||+|..|+++|.|++++++++++++++
T Consensus 78 ~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (201)
T 1fi2_A 78 DFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQN 157 (201)
T ss_dssp EECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSC
T ss_pred EECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCC
Confidence 99999999999999889999999999999997542101466689999999999999999999999999999999999999
Q ss_pred CceeecchhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhhhcCC
Q 027345 181 PGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFING 223 (224)
Q Consensus 181 pg~~~~~~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~~~~~ 223 (224)
|+.+.++.++|+++|++++++|+++|+++++++++||++|+++
T Consensus 158 p~~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~ 200 (201)
T 1fi2_A 158 PGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGG 200 (201)
T ss_dssp CCCEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTC
T ss_pred CCeEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCC
Confidence 9999999999999888999999999999999999999999865
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.98 E-value=4.8e-32 Score=251.42 Aligned_cols=153 Identities=15% Similarity=0.162 Sum_probs=138.3
Q ss_pred eeecCC-CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCC
Q 027345 61 FLSGLD-KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNN 139 (224)
Q Consensus 61 ~~~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~ 139 (224)
.|+..+ ..++..+..|++++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|+++++++++++ +
T Consensus 288 ~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g--~ 365 (466)
T 3kgl_A 288 TDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNG--D 365 (466)
T ss_dssp EEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTS--C
T ss_pred cccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCC--c
Confidence 445442 3334446789999999999999999999999999999999999999999999999999999999999863 6
Q ss_pred eEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecc--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHh
Q 027345 140 TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIA--DTVFGADPPINPDFLGKAFQLDPNVVKDLQ 217 (224)
Q Consensus 140 ~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~~f~~~p~~~~~vla~af~~~~~~v~~l~ 217 (224)
+++..+|++||+++||+|++|++ |.|++++.+++++++++|+.+.++ .++|++ +|++||+++|++|++++++|+
T Consensus 366 ~~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk 441 (466)
T 3kgl_A 366 RVFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVK 441 (466)
T ss_dssp EEEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHH
Confidence 88999999999999999999998 789999999999999999999998 577885 999999999999999999999
Q ss_pred hh
Q 027345 218 KK 219 (224)
Q Consensus 218 ~~ 219 (224)
+.
T Consensus 442 ~~ 443 (466)
T 3kgl_A 442 FN 443 (466)
T ss_dssp HS
T ss_pred hc
Confidence 84
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.97 E-value=6.4e-31 Score=245.53 Aligned_cols=154 Identities=19% Similarity=0.199 Sum_probs=137.7
Q ss_pred eeeecCC-CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCC
Q 027345 60 FFLSGLD-KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 60 f~~~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~ 138 (224)
+.++..+ ..+++.++.|++++.+++.+||+|+++||++++++|.||++++|||||+|+||+||++|+++++++++++
T Consensus 322 l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-- 399 (496)
T 3ksc_A 322 LRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNG-- 399 (496)
T ss_dssp CEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS--
T ss_pred hhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCC--
Confidence 3455442 3344457789999999999999999999999999999999999999999999999999999999999863
Q ss_pred CeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecc--hhhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027345 139 NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIA--DTVFGADPPINPDFLGKAFQLDPNVVKDL 216 (224)
Q Consensus 139 ~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~~f~~~p~~~~~vla~af~~~~~~v~~l 216 (224)
++++.++|++||+++||+|++|++.|. ++++.+++++++++|+.+.++ .++|+. +|++||+++|++|++++++|
T Consensus 400 ~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~L 475 (496)
T 3ksc_A 400 NTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQL 475 (496)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHH
Confidence 788889999999999999999998775 788999999999999999997 578874 99999999999999999999
Q ss_pred hhh
Q 027345 217 QKK 219 (224)
Q Consensus 217 ~~~ 219 (224)
++.
T Consensus 476 k~~ 478 (496)
T 3ksc_A 476 KSN 478 (496)
T ss_dssp HHS
T ss_pred Hhc
Confidence 984
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.97 E-value=3.4e-31 Score=245.72 Aligned_cols=147 Identities=15% Similarity=0.152 Sum_probs=136.3
Q ss_pred CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEE
Q 027345 67 KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVL 146 (224)
Q Consensus 67 ~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L 146 (224)
..+++.++.|++++.+++.+||+|+++||++++++|.||++++|||||+++||+||++|+++++++++++ ++++.++|
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g--~~~f~~~l 372 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG--QSVFDEEL 372 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--CEEEEEEE
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC--cEEEEEEe
Confidence 4455567889999999999999999999999999999999999999999999999999999999999863 78889999
Q ss_pred cCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecc--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhh
Q 027345 147 NKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIA--DTVFGADPPINPDFLGKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 147 ~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~ 219 (224)
++||+++||+|++|++. .|++++.+++++++++|+.+.++ .++|+. +|++||+++|++|++++++|++.
T Consensus 373 ~~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 373 SRGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp ETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred cCCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 99999999999999985 67889999999999999999997 678884 99999999999999999999985
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=1.4e-30 Score=241.91 Aligned_cols=148 Identities=14% Similarity=0.155 Sum_probs=137.1
Q ss_pred CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEE
Q 027345 67 KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVL 146 (224)
Q Consensus 67 ~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L 146 (224)
..+++.+..|++++.+++.+||+|++++++++++++.||++++||||++++||+||++|+++++++++++ ++++..+|
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g--~~~~~~~l 371 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG--QSVFDGEV 371 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--CEEEEEEE
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCC--CEEEeeEE
Confidence 4445557889999999999999999999999999999999999999999999999999999999998763 78888899
Q ss_pred cCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecc--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhhh
Q 027345 147 NKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIA--DTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 220 (224)
Q Consensus 147 ~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~~ 220 (224)
++||+++||+|++|++.| |++++.+++++++++|+.+.++ .++|++ +|++||+++|++|++++++|++..
T Consensus 372 ~~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 372 REGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp ETTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred eCCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhcC
Confidence 999999999999999999 8889999999999999999998 778885 999999999999999999999864
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=3.3e-30 Score=241.08 Aligned_cols=154 Identities=19% Similarity=0.249 Sum_probs=135.4
Q ss_pred eeeecCC-CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCC
Q 027345 60 FFLSGLD-KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 60 f~~~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~ 138 (224)
+.|+..+ ..+++.|+.|++++.+++.+||+|++++|++++++|.||++++|||||+++||+||++|+++++++++++
T Consensus 358 l~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G-- 435 (531)
T 3fz3_A 358 LKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG-- 435 (531)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--
T ss_pred eeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCC--
Confidence 4566552 4455668889999999999999999999999999999999999999999999999999999999999863
Q ss_pred CeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecc--hhhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027345 139 NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIA--DTVFGADPPINPDFLGKAFQLDPNVVKDL 216 (224)
Q Consensus 139 ~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~~f~~~p~~~~~vla~af~~~~~~v~~l 216 (224)
+++++++|++||+++||+|++|++. .+++.+.++++.++++|+...++ .++|++ +|++||+++|++|++++++|
T Consensus 436 ~~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kL 511 (531)
T 3fz3_A 436 DAILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQL 511 (531)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHH
Confidence 6888999999999999999999775 56666666644456999999998 778885 99999999999999999999
Q ss_pred hhh
Q 027345 217 QKK 219 (224)
Q Consensus 217 ~~~ 219 (224)
++.
T Consensus 512 k~~ 514 (531)
T 3fz3_A 512 KYN 514 (531)
T ss_dssp HHS
T ss_pred Hhc
Confidence 985
No 7
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.96 E-value=2.6e-29 Score=232.82 Aligned_cols=160 Identities=19% Similarity=0.098 Sum_probs=136.7
Q ss_pred CCCCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEec
Q 027345 55 AKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 134 (224)
Q Consensus 55 ~~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~ 134 (224)
.....+.|+++++++.+ +..|++++.+++.+||+|+++|++++++++.||++++||||||++|++||++|+++++++++
T Consensus 242 ~~~~~~~~~l~~~~p~~-~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~ 320 (445)
T 2cav_A 242 LSSQDKPFNLRSRDPIY-SNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGL 320 (445)
T ss_dssp ----CCCEETTSSCCSE-ESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC
T ss_pred CCCcccceeccccCCCc-cCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeC
Confidence 34557899999888877 45677899999999999999999999999999999999999999999999999999999988
Q ss_pred CCC------CCe--EEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe-cCCCCceeecc---hhhhcCCCCCCHHHH
Q 027345 135 NQL------NNT--LIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL-GSQFPGVITIA---DTVFGADPPINPDFL 202 (224)
Q Consensus 135 ~~~------~~~--~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~-~s~~pg~~~~~---~~~f~~~p~~~~~vl 202 (224)
++. +++ ++..+|++||+++||+|++|++.|. +++.+++.. ++++|+.+.++ .++|++ +|++||
T Consensus 321 ~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vl 395 (445)
T 2cav_A 321 EQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVS 395 (445)
T ss_dssp -----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHH
T ss_pred CCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHH
Confidence 521 124 6899999999999999999999998 456666644 56799999998 688885 999999
Q ss_pred HhhcCCCHHHHHHHhhhh
Q 027345 203 GKAFQLDPNVVKDLQKKF 220 (224)
Q Consensus 203 a~af~~~~~~v~~l~~~~ 220 (224)
+++|++|++++++|++.-
T Consensus 396 a~af~v~~~~v~~l~~~~ 413 (445)
T 2cav_A 396 DLTFPGSGEEVEELLENQ 413 (445)
T ss_dssp HHHSSSCHHHHHHHHHHC
T ss_pred HHHHCcCHHHHHHHHhcC
Confidence 999999999999999753
No 8
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=1.1e-28 Score=231.21 Aligned_cols=148 Identities=22% Similarity=0.235 Sum_probs=136.3
Q ss_pred CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEE
Q 027345 67 KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVL 146 (224)
Q Consensus 67 ~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L 146 (224)
..+++.+..|++++.++..+||+|+++++++++++++||++.+||||++++|++||++|+++++++++++ ++++..+|
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G--~~~~~~~l 421 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNG--NRVYDEEL 421 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS--CEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCC--CEEEeEEE
Confidence 3455567899999999999999999999999999999999999999999999999999999999998763 67778889
Q ss_pred cCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecc--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhhh
Q 027345 147 NKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIA--DTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 220 (224)
Q Consensus 147 ~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~~ 220 (224)
++||+++||+|++|++.| |++.+.+++++.+++|+...++ .++|++ +|++||+++|++|++++++|++.+
T Consensus 422 ~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 422 QEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp ETTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred cCCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhhC
Confidence 999999999999999999 8888888888878899999998 788985 999999999999999999999865
No 9
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.96 E-value=5.6e-29 Score=228.93 Aligned_cols=159 Identities=23% Similarity=0.139 Sum_probs=139.5
Q ss_pred CCCCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEec
Q 027345 55 AKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 134 (224)
Q Consensus 55 ~~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~ 134 (224)
.....+.|+++.+++.+.+. +++++.+++.+||+|++++++++++++.||++.+||||++++|++||++|+++++++++
T Consensus 210 ~~~~~~~~~l~~~~p~~~~~-~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~ 288 (416)
T 1uij_A 210 ISSEDEPFNLRSRNPIYSNN-FGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGI 288 (416)
T ss_dssp GGCSSSCEETTSSCCSEECS-SEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEE
T ss_pred CCCcccceeccccCCCccCC-CceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcC
Confidence 34567889999888777555 55799999999999999999999999999999999999999999999999999999988
Q ss_pred CCC---------CC--eEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEec-CCCCceeecc---hhhhcCCCCCCH
Q 027345 135 NQL---------NN--TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLG-SQFPGVITIA---DTVFGADPPINP 199 (224)
Q Consensus 135 ~~~---------~~--~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~-s~~pg~~~~~---~~~f~~~p~~~~ 199 (224)
++. ++ +++...|++||+++||+|++|+++|. +++.+++++. +++|+.+.++ .++|+. +|+
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p~ 363 (416)
T 1uij_A 289 KEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IER 363 (416)
T ss_dssp C------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SCH
T ss_pred CCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CCH
Confidence 520 01 46777999999999999999999998 5788888874 5699999997 688885 999
Q ss_pred HHHHhhcCCCHHHHHHHhhh
Q 027345 200 DFLGKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 200 ~vla~af~~~~~~v~~l~~~ 219 (224)
+||+++|+++++++++|++.
T Consensus 364 ~vla~af~~~~~~v~~l~~~ 383 (416)
T 1uij_A 364 QVQELAFPGSAQDVERLLKK 383 (416)
T ss_dssp HHHHHHSSSCHHHHHHHTTS
T ss_pred HHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999999974
No 10
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.96 E-value=1.6e-28 Score=229.09 Aligned_cols=148 Identities=20% Similarity=0.247 Sum_probs=136.0
Q ss_pred CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEE
Q 027345 67 KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVL 146 (224)
Q Consensus 67 ~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L 146 (224)
..+++.+..|++++.++..+||+|+++++++++++++||++.+||||++++|++||++|+++++++++++ ++++..+|
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G--~~~~~~~l 387 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNG--ERVFDGEL 387 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTS--CEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCC--CEEeeeEE
Confidence 3445557889999999999999999999999999999999999999999999999999999999998753 67778889
Q ss_pred cCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecc--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhhh
Q 027345 147 NKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIA--DTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 220 (224)
Q Consensus 147 ~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~~ 220 (224)
++||+++||+|++|++.| |++.+.+++++.+++|+...++ .++|++ +|++||+++|++|++++++|++.+
T Consensus 388 ~~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 388 QEGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp ETTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred cCCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhhC
Confidence 999999999999999999 8888999988878899999998 788985 999999999999999999999865
No 11
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.96 E-value=1.1e-28 Score=230.93 Aligned_cols=154 Identities=19% Similarity=0.239 Sum_probs=138.6
Q ss_pred eeeecCC-CCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCC
Q 027345 60 FFLSGLD-KPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 60 f~~~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~ 138 (224)
+.++..+ .++++.+..|++++.++..+||+|+++++++++++++||++.+||||++++|++||++|+++++++++++
T Consensus 331 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g-- 408 (493)
T 2d5f_A 331 LHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQG-- 408 (493)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--
T ss_pred eeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCC--
Confidence 3344432 5566668899999999999999999999999999999999999999999999999999999999998753
Q ss_pred CeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecchhhhcCCCCCCHHHHHhhcCCCHHHHHHHhh
Q 027345 139 NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQK 218 (224)
Q Consensus 139 ~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~~f~~~p~~~~~vla~af~~~~~~v~~l~~ 218 (224)
++++..+|++||+++||+|++|++.| +++++.+++++++++|+.+.+ .++|++ +|++||+++|+++++++++|++
T Consensus 409 ~~~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~ 483 (493)
T 2d5f_A 409 NAVFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKY 483 (493)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHH
T ss_pred CEEEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHh
Confidence 67777889999999999999999998 568899999999999999999 778985 9999999999999999999998
Q ss_pred hh
Q 027345 219 KF 220 (224)
Q Consensus 219 ~~ 220 (224)
..
T Consensus 484 ~~ 485 (493)
T 2d5f_A 484 QG 485 (493)
T ss_dssp SS
T ss_pred cC
Confidence 64
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.96 E-value=2e-28 Score=226.35 Aligned_cols=161 Identities=21% Similarity=0.146 Sum_probs=140.3
Q ss_pred CCCCCCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEE
Q 027345 53 KLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 53 ~~~~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 132 (224)
.......+.|+++.+++.+. ..|++++.+++.++|+|++++++++++++.||++++|||||+++|++||++|+++++++
T Consensus 225 ~g~~~~~~~~~l~~~~p~~~-~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv 303 (434)
T 2ea7_A 225 KELSSQDEPFNLRNSKPIYS-NKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELV 303 (434)
T ss_dssp SCTTCSSSCEETTSSCCSEE-ETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEE
T ss_pred CCCCCcccceeeccCCCcee-CCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEE
Confidence 34456678999998887774 56778999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC--------CC--eEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe-cCCCCceeecc---hhhhcCCCCCC
Q 027345 133 TSNQL--------NN--TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL-GSQFPGVITIA---DTVFGADPPIN 198 (224)
Q Consensus 133 ~~~~~--------~~--~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~-~s~~pg~~~~~---~~~f~~~p~~~ 198 (224)
++++. ++ +++..+|++||+++||+|++|++.|. +++.+++++ ++++|+.+.++ .++|+. +|
T Consensus 304 ~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p 378 (434)
T 2ea7_A 304 GLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IP 378 (434)
T ss_dssp EEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SC
T ss_pred ecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CC
Confidence 87410 02 26677999999999999999999998 467777765 55689999998 678885 99
Q ss_pred HHHHHhhcCCCHHHHHHHhhh
Q 027345 199 PDFLGKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 199 ~~vla~af~~~~~~v~~l~~~ 219 (224)
++||+++|++|++++++|++.
T Consensus 379 ~~vla~af~v~~~~v~~l~~~ 399 (434)
T 2ea7_A 379 TEVLEVSFPASGKKVEKLIKK 399 (434)
T ss_dssp HHHHHHHSSSCHHHHHHHHTT
T ss_pred HHHHHHHHCcCHHHHHHHHhc
Confidence 999999999999999999974
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.95 E-value=1.3e-27 Score=219.81 Aligned_cols=156 Identities=18% Similarity=0.126 Sum_probs=134.9
Q ss_pred CCeeeecCCCCCCccCCCCceEEEecccCC-CCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCC
Q 027345 58 EDFFLSGLDKPGNTANRLGFSVTNANVEQI-PGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 136 (224)
Q Consensus 58 ~df~~~~~~~~~~~~~~~g~~v~~~~~~~~-P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 136 (224)
..+.|+++.+++.++|. +++++.+++.++ |+|+++|++++++++.|||+.+|||||+++|++||++|++++++++++.
T Consensus 226 ~~~~~nl~~~~p~~~n~-~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNN-FGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEET-TEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCC-CCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 47889999888877555 456899999999 9999999999999999999999999999999999999999999997641
Q ss_pred C----------------------CCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe-cCCCCceeecch---hh
Q 027345 137 L----------------------NNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL-GSQFPGVITIAD---TV 190 (224)
Q Consensus 137 ~----------------------~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~-~s~~pg~~~~~~---~~ 190 (224)
. ..+++...|++||+++||+|++||+.|.+ ++.+++.. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 0 01577899999999999999999998865 46665533 577999999985 67
Q ss_pred hcCCCCCCHHHHHhhcCCCHHHHHHHhhh
Q 027345 191 FGADPPINPDFLGKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 191 f~~~p~~~~~vla~af~~~~~~v~~l~~~ 219 (224)
|. ++|++||+++|++|++++++|++.
T Consensus 383 ~~---~~~~evla~af~v~~~~v~~L~~~ 408 (418)
T 3s7i_A 383 ID---QIEKQAKDLAFPGSGEQVEKLIKN 408 (418)
T ss_dssp HH---HSCHHHHHHHSSSCHHHHHHHHHT
T ss_pred hh---cCCHHHHHHHhCCCHHHHHHHHhc
Confidence 87 499999999999999999999974
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.94 E-value=1.1e-26 Score=190.68 Aligned_cols=151 Identities=15% Similarity=0.202 Sum_probs=125.8
Q ss_pred CCeeeecCCCCCCccCCCCceEEEecc-----cCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEE
Q 027345 58 EDFFLSGLDKPGNTANRLGFSVTNANV-----EQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 58 ~df~~~~~~~~~~~~~~~g~~v~~~~~-----~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 132 (224)
+.|+|+..+..... ...|++++.++. ..+|+++ ++++++++++||+..+|| |++++|++||++|+++++++
T Consensus 2 ~p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~ 77 (178)
T 1dgw_A 2 NPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLV 77 (178)
T ss_dssp CTTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEE
T ss_pred CCceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEE
Confidence 35788876655444 467888999877 6788887 589999999999999999 98899999999999999998
Q ss_pred ecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCc-cEEEEEEe-cCCCCceee---cc-----hhhhcCCCCCCHHHH
Q 027345 133 TSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKT-NAVAFASL-GSQFPGVIT---IA-----DTVFGADPPINPDFL 202 (224)
Q Consensus 133 ~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~-~a~~~~~~-~s~~pg~~~---~~-----~~~f~~~p~~~~~vl 202 (224)
+++ + ..++.|++||+++||+|.+|+++|.|++ ++++++++ .+++||.+. ++ .++|+ ++|++||
T Consensus 78 ~~~---~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~---~~p~~vl 150 (178)
T 1dgw_A 78 NPD---G-RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFL 150 (178)
T ss_dssp ETT---E-EEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHH
T ss_pred eCC---C-cEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh---hCCHHHH
Confidence 764 2 3478999999999999999999999986 77877764 567888433 32 46787 4999999
Q ss_pred HhhcCCCHHHHHHHhhh
Q 027345 203 GKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 203 a~af~~~~~~v~~l~~~ 219 (224)
+++|++|++++++|+.+
T Consensus 151 a~af~v~~~~~~~l~~~ 167 (178)
T 1dgw_A 151 EASYDSPYDEIEQTLLQ 167 (178)
T ss_dssp HHHHTSCHHHHHHHTTS
T ss_pred HHHHCcCHHHHHHHhcC
Confidence 99999999999999943
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.93 E-value=1.8e-25 Score=204.34 Aligned_cols=148 Identities=22% Similarity=0.135 Sum_probs=121.9
Q ss_pred eecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEec------C
Q 027345 62 LSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS------N 135 (224)
Q Consensus 62 ~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~------~ 135 (224)
+.+..+.+.+. ..+++++.+++.+ ++++++++++.||++.+||||++++|+.||++|+++++++++ +
T Consensus 213 ~~l~~~~p~~~-n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~ 285 (397)
T 2phl_A 213 KSLSKQDNTIG-NEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETL 285 (397)
T ss_dssp -------CEEE-ETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCS
T ss_pred ccccccCCccc-CCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCC
Confidence 44444444443 4456699999987 789999999999999999999999999999999999999987 3
Q ss_pred CCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe-cCCCCceeecc---hhhhcCCC-CCC-HHHHHhhcCCC
Q 027345 136 QLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL-GSQFPGVITIA---DTVFGADP-PIN-PDFLGKAFQLD 209 (224)
Q Consensus 136 ~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~-~s~~pg~~~~~---~~~f~~~p-~~~-~~vla~af~~~ 209 (224)
+ +++++.+|++||+++||+|++|+++|.+ ++.++++. ++++|+.+.++ .++|++-| +|+ ++||+++|+++
T Consensus 286 g--~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~ 361 (397)
T 2phl_A 286 E--YESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGS 361 (397)
T ss_dssp C--EEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSC
T ss_pred C--ceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcC
Confidence 2 6899999999999999999999999996 67777654 56699999888 78898622 233 99999999999
Q ss_pred HHHHHHHhhhh
Q 027345 210 PNVVKDLQKKF 220 (224)
Q Consensus 210 ~~~v~~l~~~~ 220 (224)
++++++|++..
T Consensus 362 ~~~v~~l~~~~ 372 (397)
T 2phl_A 362 GDEVMKLINKQ 372 (397)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhcC
Confidence 99999999864
No 16
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=6.8e-24 Score=190.04 Aligned_cols=160 Identities=20% Similarity=0.200 Sum_probs=141.4
Q ss_pred CCCCCCCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEE
Q 027345 52 PKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGF 131 (224)
Q Consensus 52 ~~~~~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~ 131 (224)
+...+.++|+|+.+++++.. +..|+.++.+....+|+++ ++++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPLV-SLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCCSE-EETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCCcc-cCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 45667889999988877643 5678899999999999987 47788999999999999999977999999999999999
Q ss_pred EecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecchhhhcCCCCCCHHHHHhhcCCCHH
Q 027345 132 VTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPN 211 (224)
Q Consensus 132 ~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~~f~~~p~~~~~vla~af~~~~~ 211 (224)
++++ ++...+.|++||++++|+|..|++.|.|++++++++++..++++.+.++.+ ++ .+|++||+++|+++++
T Consensus 271 ~~~~---g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~-~~---~~~~~vl~~~f~~~~~ 343 (361)
T 2vqa_A 271 FASE---GKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTW-LA---SNPSSVLGNTFQISPE 343 (361)
T ss_dssp ECST---TCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHH-HH---TSCHHHHHHHHTCCHH
T ss_pred EcCC---CcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHH-hh---hCCHHHHHHHHCcCHH
Confidence 7664 555579999999999999999999999999999999999999999999875 55 3999999999999999
Q ss_pred HHHHHhhhhc
Q 027345 212 VVKDLQKKFI 221 (224)
Q Consensus 212 ~v~~l~~~~~ 221 (224)
++++||++..
T Consensus 344 ~~~~l~~~~~ 353 (361)
T 2vqa_A 344 LTKKLPVQDT 353 (361)
T ss_dssp HHTTSCCSCC
T ss_pred HHHhhhccCC
Confidence 9999987654
No 17
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.91 E-value=2.1e-24 Score=200.45 Aligned_cols=141 Identities=21% Similarity=0.310 Sum_probs=119.3
Q ss_pred CCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeE------------
Q 027345 74 RLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTL------------ 141 (224)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~------------ 141 (224)
..++ .+.++..+.|+|+++|++++|++++|||+++||||+ ++|++||++|+++++++.++. ...
T Consensus 43 se~G-~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~--~~tf~~~~~~~~~~~ 118 (459)
T 2e9q_A 43 AEAG-FTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGC--AETYQTDLRRSQSAG 118 (459)
T ss_dssp ETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTC--CCCEEECCC------
T ss_pred cCCc-EEEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCC--cchhccchhhccccc
Confidence 3455 455567778999999999999999999999999997 999999999999999987641 111
Q ss_pred --------EEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCC--------Cceeecc------------------
Q 027345 142 --------IAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQF--------PGVITIA------------------ 187 (224)
Q Consensus 142 --------~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~--------pg~~~~~------------------ 187 (224)
+.+.|++||+++||+|++||++|.|++++++++++++.| +..+.++
T Consensus 119 ~~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 198 (459)
T 2e9q_A 119 SAFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSR 198 (459)
T ss_dssp -CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC------
T ss_pred cccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccc
Confidence 257999999999999999999999999999999998654 3344444
Q ss_pred --------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhhhc
Q 027345 188 --------DTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 188 --------~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~~~ 221 (224)
.++|+ +++++||+++|++|.+++++|+++..
T Consensus 199 ~~~~~~~~~nif~---gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 199 KGSSGEKSGNIFS---GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp ------CCCCTTT---TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred cccccccccchhh---cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 37888 59999999999999999999997654
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.91 E-value=5e-24 Score=196.87 Aligned_cols=152 Identities=17% Similarity=0.187 Sum_probs=125.8
Q ss_pred CCCeeeecCC-CCCCccCCCCceEEEe--cccCCCCCCccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEE
Q 027345 57 AEDFFLSGLD-KPGNTANRLGFSVTNA--NVEQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 57 ~~df~~~~~~-~~~~~~~~~g~~v~~~--~~~~~P~l~~~g-is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 132 (224)
.+.|.|+... ..... ...|+++..+ +..+.|.|++++ +++++++++||++++|| |++++|++||++|+++++++
T Consensus 20 ~~p~~f~~~~~~~~~~-~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v 97 (434)
T 2ea7_A 20 NNPFYFNSDRWFRTLY-RNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLV 97 (434)
T ss_dssp GCTTEECTTTSEEEEE-EETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred CCCeEEeccccccceE-EcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEE
Confidence 3567777543 22222 3467778876 446778999998 99999999999999999 77899999999999999998
Q ss_pred ecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC-CccEEEEEEec-CCCCce---eecch-----hhhcCCCCCCHHHH
Q 027345 133 TSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG-KTNAVAFASLG-SQFPGV---ITIAD-----TVFGADPPINPDFL 202 (224)
Q Consensus 133 ~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G-~~~a~~~~~~~-s~~pg~---~~~~~-----~~f~~~p~~~~~vl 202 (224)
++ ++.+++.|++||++++|+|+.||++|.| +++++++++++ +++||. +.++. ++|+ ++|++||
T Consensus 98 ~~----~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~---~~~~~vL 170 (434)
T 2ea7_A 98 NP----DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR---GFSKNIL 170 (434)
T ss_dssp CS----SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG---GSCHHHH
T ss_pred eC----CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh---cCCHHHH
Confidence 75 4556899999999999999999999998 88999999874 677753 34543 3677 4999999
Q ss_pred HhhcCCCHHHHHHHh
Q 027345 203 GKAFQLDPNVVKDLQ 217 (224)
Q Consensus 203 a~af~~~~~~v~~l~ 217 (224)
+++|++|++++++|+
T Consensus 171 a~af~v~~~~v~~l~ 185 (434)
T 2ea7_A 171 EASFDSDFKEINRVL 185 (434)
T ss_dssp HHHHTSCHHHHHHHH
T ss_pred HHHhCCCHHHHHhhh
Confidence 999999999999999
No 19
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.91 E-value=7.2e-24 Score=196.35 Aligned_cols=154 Identities=15% Similarity=0.181 Sum_probs=126.0
Q ss_pred CCCeeeecCCCCCCccCCCCceEEEec--ccCCCCCCccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEe
Q 027345 57 AEDFFLSGLDKPGNTANRLGFSVTNAN--VEQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVT 133 (224)
Q Consensus 57 ~~df~~~~~~~~~~~~~~~g~~v~~~~--~~~~P~l~~~g-is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 133 (224)
.+.|+|......... ...++.+..++ ..+.|++++++ +++++++++||+.++|| |++++|++||++|++++++++
T Consensus 46 ~~p~vf~~~~~~~~i-~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 123 (445)
T 2cav_A 46 NNPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 123 (445)
T ss_dssp CCTTEECGGGEEEEE-EETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCCeEEchhhcCceE-EcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEe
Confidence 456777655432122 23467777764 35667999988 99999999999999999 667999999999999999997
Q ss_pred cCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC-CccEEEEEEec-CCCCce---eecc-----hhhhcCCCCCCHHHHH
Q 027345 134 SNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG-KTNAVAFASLG-SQFPGV---ITIA-----DTVFGADPPINPDFLG 203 (224)
Q Consensus 134 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G-~~~a~~~~~~~-s~~pg~---~~~~-----~~~f~~~p~~~~~vla 203 (224)
++ ++ +++.|++||++++|+|+.||++|.| +++++++++++ +++||. +.++ .++|+ ++|++||+
T Consensus 124 ~~---~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~---~~~~~vLa 196 (445)
T 2cav_A 124 PD---GR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLE 196 (445)
T ss_dssp TT---EE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHH
T ss_pred CC---CC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh---cCCHHHHH
Confidence 74 44 6899999999999999999999999 89999999887 667763 3444 36787 49999999
Q ss_pred hhcCCCHHHHHHHhhh
Q 027345 204 KAFQLDPNVVKDLQKK 219 (224)
Q Consensus 204 ~af~~~~~~v~~l~~~ 219 (224)
++|++|++++++|+++
T Consensus 197 ~af~v~~~~v~~l~~~ 212 (445)
T 2cav_A 197 ASYDSPYDEIEQTLLQ 212 (445)
T ss_dssp HHHTSCHHHHHHHTTS
T ss_pred HHhCCCHHHHHhhhcc
Confidence 9999999999999953
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.90 E-value=6e-24 Score=195.45 Aligned_cols=153 Identities=17% Similarity=0.204 Sum_probs=123.8
Q ss_pred CCCeeeecCCCCCCccCCCCceEEEe--cccCCCCCCccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEe
Q 027345 57 AEDFFLSGLDKPGNTANRLGFSVTNA--NVEQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVT 133 (224)
Q Consensus 57 ~~df~~~~~~~~~~~~~~~g~~v~~~--~~~~~P~l~~~g-is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 133 (224)
.+.|+|+............|++++.+ +....+.|++++ +++++++++||++++|| |++++|++||++|++++++++
T Consensus 8 ~~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 86 (416)
T 1uij_A 8 NNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVN 86 (416)
T ss_dssp SCTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEEC
T ss_pred CCCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEE
Confidence 35577762222212224567778876 345558899888 99999999999999999 777999999999999999987
Q ss_pred cCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC-CccEEEEEEec-CCCCce---eecch-----hhhcCCCCCCHHHHH
Q 027345 134 SNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG-KTNAVAFASLG-SQFPGV---ITIAD-----TVFGADPPINPDFLG 203 (224)
Q Consensus 134 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G-~~~a~~~~~~~-s~~pg~---~~~~~-----~~f~~~p~~~~~vla 203 (224)
+ ++.+++.+++||+++||+|+.||++|.| +++++++++++ +++||. +.++. ++|+ ++|++||+
T Consensus 87 ~----~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~---~~~~~vLa 159 (416)
T 1uij_A 87 N----DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ---GFSHNILE 159 (416)
T ss_dssp S----SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG---GSCHHHHH
T ss_pred C----CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh---cCCHHHHH
Confidence 6 3445899999999999999999999995 99999999986 567764 34443 4677 49999999
Q ss_pred hhcCCCHHHHHHHh
Q 027345 204 KAFQLDPNVVKDLQ 217 (224)
Q Consensus 204 ~af~~~~~~v~~l~ 217 (224)
++|++|++++++|+
T Consensus 160 ~af~v~~~~v~~l~ 173 (416)
T 1uij_A 160 TSFHSEFEEINRVL 173 (416)
T ss_dssp HHHTSCHHHHHHHH
T ss_pred HHhCcCHHHHHhhh
Confidence 99999999999999
No 21
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.90 E-value=1.4e-23 Score=195.85 Aligned_cols=140 Identities=16% Similarity=0.243 Sum_probs=117.7
Q ss_pred CCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCe-------------
Q 027345 74 RLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNT------------- 140 (224)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~------------- 140 (224)
..++.+ .++....|+|+++|++++|++++|||+++||||+ ++|++||++|+++++++.++ ++
T Consensus 28 se~G~~-e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg---~~et~~~~~~~~~~~ 102 (476)
T 1fxz_A 28 SEGGLI-ETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPG---CPSTFEEPQQPQQRG 102 (476)
T ss_dssp ETTEEE-EECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTT---CCCC-----------
T ss_pred cCCceE-EeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCC---Ccchhhccccccccc
Confidence 345544 4466677999999999999999999999999998 99999999999999999864 21
Q ss_pred ---------EEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCC--------ceeecc----------------
Q 027345 141 ---------LIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFP--------GVITIA---------------- 187 (224)
Q Consensus 141 ---------~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~p--------g~~~~~---------------- 187 (224)
...+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 103 ~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~ 182 (476)
T 1fxz_A 103 QSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGG 182 (476)
T ss_dssp -------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC----
T ss_pred cccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccc
Confidence 12689999999999999999999999999999999985443 344443
Q ss_pred ----------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhhhc
Q 027345 188 ----------------DTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 188 ----------------~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~~~ 221 (224)
.++|+ ++++++|+++|++|.+++++|+++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~if~---gf~~~vLa~af~v~~~~~~kl~~~~~ 229 (476)
T 1fxz_A 183 HQSQKGKHQQEEENEGGSILS---GFTLEFLEHAFSVDKQIAKNLQGENE 229 (476)
T ss_dssp ---------------CCCGGG---GSCHHHHHHHHTCCHHHHHHHSCC--
T ss_pred ccccccccccccccccchhhh---cCCHHHHHhhhCCCHHHHHhhhcccc
Confidence 36887 59999999999999999999997543
No 22
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.90 E-value=2.1e-23 Score=193.54 Aligned_cols=139 Identities=20% Similarity=0.341 Sum_probs=118.3
Q ss_pred CCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeE------------
Q 027345 74 RLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTL------------ 141 (224)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~------------ 141 (224)
..|+.+..++ .+-+.|+++|++++|++++|||+.+|||| +++|++||++|+++++++.++. ++.
T Consensus 30 se~G~~e~~d-~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc--~etf~~~~~~~~~~~ 105 (465)
T 3qac_A 30 AERGLTEVWD-SNEQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGC--PETYESGSQQFQGGE 105 (465)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTC--CCCC-----------
T ss_pred CCCcEEEEEC-CCChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCC--Cceeecchhcccccc
Confidence 4566666665 45578999999999999999999999999 7999999999999999997631 121
Q ss_pred ------------------------EEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCC---------Cceeecc-
Q 027345 142 ------------------------IAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQF---------PGVITIA- 187 (224)
Q Consensus 142 ------------------------~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~---------pg~~~~~- 187 (224)
..+.+++||++++|+|+.||++|.|++++++++++++.| +..+.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG 185 (465)
T 3qac_A 106 DERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAG 185 (465)
T ss_dssp -------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSS
T ss_pred ccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecC
Confidence 256999999999999999999999999999999997643 4556665
Q ss_pred -----------------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhh
Q 027345 188 -----------------------DTVFGADPPINPDFLGKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 188 -----------------------~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~ 219 (224)
.++|+ +++.++|+++|+++.+++++|++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 186 KPQQEHSGEHQFSRESRRGERNTGNIFR---GFETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCCCSCC--------------CCCCGGG---GSCHHHHHHHHTCCHHHHHHHHTT
T ss_pred CCccccccccccccccccccccccchhh---cCCHHHHHHHhCCCHHHHHHhhhc
Confidence 36888 699999999999999999999864
No 23
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.89 E-value=3.1e-23 Score=193.69 Aligned_cols=136 Identities=19% Similarity=0.329 Sum_probs=117.2
Q ss_pred CCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEE------------
Q 027345 75 LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI------------ 142 (224)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~------------ 142 (224)
.|+ ++.++..+.|+|+++|++++|++++|||+++|||| +++|++||++|+++++++.++. ++.|
T Consensus 27 e~G-~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~--~e~f~~~~~~~~~~~~ 102 (496)
T 3ksc_A 27 EGG-LIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGC--PETFEEPQESEQGEGR 102 (496)
T ss_dssp TTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTC--CCC-------------
T ss_pred CCc-EEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCC--Cccchhhhhccccccc
Confidence 344 66777789999999999999999999999999999 7999999999999999998641 1222
Q ss_pred --------EEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCc--------eeecc-------------------
Q 027345 143 --------AKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPG--------VITIA------------------- 187 (224)
Q Consensus 143 --------~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg--------~~~~~------------------- 187 (224)
.+.|++||+|+||+|++||++|.|+++++++++++..++. .+.++
T Consensus 103 ~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~ 182 (496)
T 3ksc_A 103 RYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQE 182 (496)
T ss_dssp --CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-------
T ss_pred ccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccc
Confidence 4599999999999999999999999999999999765532 33332
Q ss_pred -----hhhhcCCCCCCHHHHHhhcCCCHHHHHHHh
Q 027345 188 -----DTVFGADPPINPDFLGKAFQLDPNVVKDLQ 217 (224)
Q Consensus 188 -----~~~f~~~p~~~~~vla~af~~~~~~v~~l~ 217 (224)
.++|. +|+.++|+.||+++.+++++|+
T Consensus 183 ~~~~~~ni~s---gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 183 QENEGNNIFS---GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ----CCSGGG---GSCHHHHHHHHTCCHHHHHHHT
T ss_pred ccccCCCchh---hcCHHHHHHHHCCCHHHHHHHH
Confidence 47888 5999999999999999999998
No 24
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.89 E-value=2.8e-23 Score=189.79 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=125.8
Q ss_pred CCCeeeecCC-CCCCccCCCCceEEEe--cccCCCCCCccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEE
Q 027345 57 AEDFFLSGLD-KPGNTANRLGFSVTNA--NVEQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 57 ~~df~~~~~~-~~~~~~~~~g~~v~~~--~~~~~P~l~~~g-is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 132 (224)
.+.|+|...+ ..... ...|+.++.+ +..+.|+|++++ +++++++++|||+++|||| +++|++||++|+++++++
T Consensus 11 ~~p~~f~~~~~~~~~~-~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v 88 (397)
T 2phl_A 11 DNPFYFNSDNSWNTLF-KNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLV 88 (397)
T ss_dssp CCTTEECGGGTEEEEE-EETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEE
T ss_pred CCCcEeccchhccceE-EcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEE
Confidence 3557776443 22222 4567778887 566779999998 9999999999999999999 599999999999999999
Q ss_pred ecCCCCCeEEEEEEcCCCE------EEEcCCCeEEEEeCC-CccEEEEEEecCCC-C--ceeecc-----hhhhcCCCCC
Q 027345 133 TSNQLNNTLIAKVLNKGDV------FVFPIGMIHFQFNIG-KTNAVAFASLGSQF-P--GVITIA-----DTVFGADPPI 197 (224)
Q Consensus 133 ~~~~~~~~~~~~~L~~GDv------~~~P~G~~H~~~N~G-~~~a~~~~~~~s~~-p--g~~~~~-----~~~f~~~p~~ 197 (224)
+++ ++ .++.|++||+ ++||+|++||++|.| ++++++++++++.+ | ..+.++ .++|+ ++
T Consensus 89 ~~~---~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~---~~ 161 (397)
T 2phl_A 89 KPD---DR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ---EF 161 (397)
T ss_dssp ETT---TE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG---GS
T ss_pred eCC---Cc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh---cC
Confidence 875 45 5899999999 999999999999999 88999999987443 3 344553 24676 49
Q ss_pred CHHHHHhhcCCCHHHHHHHh
Q 027345 198 NPDFLGKAFQLDPNVVKDLQ 217 (224)
Q Consensus 198 ~~~vla~af~~~~~~v~~l~ 217 (224)
|++||+++|++|++++++|+
T Consensus 162 ~~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 162 SKHILEASFNSKFEEINRVL 181 (397)
T ss_dssp CHHHHHHHHTSCHHHHHHHH
T ss_pred CHHHHHHHhCCCHHHHHhhh
Confidence 99999999999999999999
No 25
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.89 E-value=5.4e-23 Score=189.02 Aligned_cols=135 Identities=21% Similarity=0.266 Sum_probs=111.0
Q ss_pred CCCceEEEec-----ccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcC
Q 027345 74 RLGFSVTNAN-----VEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNK 148 (224)
Q Consensus 74 ~~g~~v~~~~-----~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~ 148 (224)
...|.+..+. ...+|+|+ ++++++++++|+|+.+|| |++++|++||++|+++++++++ ++.+.+.|++
T Consensus 20 se~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~----~~~~~~~l~~ 92 (418)
T 3s7i_A 20 NQNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG----NNRKSFNLDE 92 (418)
T ss_dssp CSSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS----SCEEEEEEET
T ss_pred cCCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec----CCEEEEEecC
Confidence 4456677763 35777777 466778889999999999 8899999999999999999987 5567899999
Q ss_pred CCEEEEcCCCeEEEEeCCCc-cEEEEE-EecCCCCceeec--------chhhhcCCCCCCHHHHHhhcCCCHHHHHHHhh
Q 027345 149 GDVFVFPIGMIHFQFNIGKT-NAVAFA-SLGSQFPGVITI--------ADTVFGADPPINPDFLGKAFQLDPNVVKDLQK 218 (224)
Q Consensus 149 GDv~~~P~G~~H~~~N~G~~-~a~~~~-~~~s~~pg~~~~--------~~~~f~~~p~~~~~vla~af~~~~~~v~~l~~ 218 (224)
||+++||+|++||++|.|+. .+++++ .+++++||.+.. ..++|+ ++|++||+++|++|++++++|++
T Consensus 93 GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~---gf~~evLa~af~v~~~~v~kl~~ 169 (418)
T 3s7i_A 93 GHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ---GFSRNTLEAAFNAEFNEIRRVLL 169 (418)
T ss_dssp TEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred CCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh---cCCHHHHHHHHCcCHHHHHhhhc
Confidence 99999999999999998865 455554 356778876433 135777 59999999999999999999983
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.88 E-value=2.1e-22 Score=188.43 Aligned_cols=141 Identities=23% Similarity=0.388 Sum_probs=117.6
Q ss_pred CceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCC-C------------C--C-
Q 027345 76 GFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ-L------------N--N- 139 (224)
Q Consensus 76 g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~------------~--~- 139 (224)
|+ ++.++....|+|+++|+++++++++||++++||||+ ++|++||++|+++++++.++. + + +
T Consensus 27 ~G-~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~ 104 (493)
T 2d5f_A 27 GG-LIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQ 104 (493)
T ss_dssp SE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC-----------
T ss_pred Cc-EEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 55 566777888999999999999999999999999998 799999999999999996530 0 0 0
Q ss_pred ------eEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCC---C-----Cceeecc------------------
Q 027345 140 ------TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQ---F-----PGVITIA------------------ 187 (224)
Q Consensus 140 ------~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~---~-----pg~~~~~------------------ 187 (224)
....+.|++||+++||+|++||++|.|+++++++++++.. | +..+.++
T Consensus 105 ~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (493)
T 2d5f_A 105 QQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQK 184 (493)
T ss_dssp --CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC------
T ss_pred cccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccc
Confidence 0125699999999999999999999999999999999743 2 2344444
Q ss_pred -----------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhhhc
Q 027345 188 -----------------DTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 188 -----------------~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~~~ 221 (224)
.++|+ +|++++|+++|++|.+++++|+++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~nif~---gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 185 SHGGRKQGQHQQQEEEGGSVLS---GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp ---------------CCCCGGG---GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred ccccccccccccccccccchhh---cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 36787 59999999999999999999997654
No 27
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.87 E-value=4.8e-22 Score=184.46 Aligned_cols=141 Identities=21% Similarity=0.279 Sum_probs=116.7
Q ss_pred CCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecC-CCC--------------
Q 027345 74 RLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN-QLN-------------- 138 (224)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~-------------- 138 (224)
..++.+..++..+ |+|+++|++++|++++|||+++||||+ ++|++||++|+++++++.++ ++.
T Consensus 23 se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~ 100 (466)
T 3kgl_A 23 AEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSP 100 (466)
T ss_dssp ETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---
T ss_pred CCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccc
Confidence 4566566665554 999999999999999999999999998 99999999999999999762 100
Q ss_pred -----------------------------------------CeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEec
Q 027345 139 -----------------------------------------NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLG 177 (224)
Q Consensus 139 -----------------------------------------~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~ 177 (224)
.....+.|++||+++||+|++||++|.|+++++++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d 180 (466)
T 3kgl_A 101 FGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466)
T ss_dssp --------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEc
Confidence 001125899999999999999999999999999999986
Q ss_pred CCC--------Cceeecc------------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhh
Q 027345 178 SQF--------PGVITIA------------------DTVFGADPPINPDFLGKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 178 s~~--------pg~~~~~------------------~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~ 219 (224)
..| +..+.++ .++|+ +++.++|+++|+++.+++++|+++
T Consensus 181 ~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s---GF~~e~La~Af~v~~e~~~kL~~~ 245 (466)
T 3kgl_A 181 LASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN---GFTPEVLAKAFKIDVRTAQQLQNQ 245 (466)
T ss_dssp SSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG---GSCHHHHHHHHTSCHHHHHHHTCT
T ss_pred CCCcccccCCceeeeEecCCCccccccccccccccCCCccc---cCCHHHHHHHhCCCHHHHHHHhcc
Confidence 544 3445554 26787 599999999999999999999864
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.87 E-value=5.7e-22 Score=185.81 Aligned_cols=140 Identities=21% Similarity=0.362 Sum_probs=116.3
Q ss_pred CCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCC-C--------CCe-----
Q 027345 75 LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ-L--------NNT----- 140 (224)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~--------~~~----- 140 (224)
.|+ ++.++..+.|+|+++|+++++++++|||+.+||||+ +.|++||++|++.++++.++. + +++
T Consensus 29 e~G-~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (510)
T 3c3v_A 29 EGG-YIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQR 106 (510)
T ss_dssp TTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC--------
T ss_pred CCc-eEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccc
Confidence 454 566677777999999999999999999999999997 999999999999999997631 0 000
Q ss_pred ------------------EEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCC--------Cceeecc-------
Q 027345 141 ------------------LIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQF--------PGVITIA------- 187 (224)
Q Consensus 141 ------------------~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~--------pg~~~~~------- 187 (224)
.+.+.|++||+++||+|++||++|.|+++++++++++..| +..+.|+
T Consensus 107 ~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~ 186 (510)
T 3c3v_A 107 PPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEF 186 (510)
T ss_dssp ------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTT
T ss_pred ccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCccccc
Confidence 0137899999999999999999999999999999997654 2333333
Q ss_pred -----------------------------------------------------hhhhcCCCCCCHHHHHhhcCCC-HHHH
Q 027345 188 -----------------------------------------------------DTVFGADPPINPDFLGKAFQLD-PNVV 213 (224)
Q Consensus 188 -----------------------------------------------------~~~f~~~p~~~~~vla~af~~~-~~~v 213 (224)
.++|+ +++.++|+++|+++ ++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~~~La~af~v~~~~~~ 263 (510)
T 3c3v_A 187 LRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS---GFTPEFLAQAFQVDDRQIV 263 (510)
T ss_dssp GGGCC------------------------------------------------CCTGG---GSCHHHHHHHHTCCCHHHH
T ss_pred chhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee---cCCHHHHHHHhCCCHHHHH
Confidence 24777 69999999999999 9999
Q ss_pred HHHhhh
Q 027345 214 KDLQKK 219 (224)
Q Consensus 214 ~~l~~~ 219 (224)
++|++.
T Consensus 264 ~~l~~~ 269 (510)
T 3c3v_A 264 QNLRGE 269 (510)
T ss_dssp HHHTTT
T ss_pred HHhhcc
Confidence 999864
No 29
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.85 E-value=1.7e-21 Score=182.31 Aligned_cols=141 Identities=21% Similarity=0.318 Sum_probs=116.8
Q ss_pred CCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecC-CC---------------
Q 027345 74 RLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN-QL--------------- 137 (224)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~--------------- 137 (224)
.-|+ ++.++..++|+|+++|++++|++|.|+|+++||+|+ ++|++||++|++.++++.+. ++
T Consensus 28 se~G-~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~ 105 (531)
T 3fz3_A 28 AEAG-QIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQ 105 (531)
T ss_dssp ETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--------
T ss_pred cCCc-eEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccc
Confidence 4455 556666889999999999999999999999999998 99999999999999999764 11
Q ss_pred --------------------------------------------------------------CCeEEEEEEcCCCEEEEc
Q 027345 138 --------------------------------------------------------------NNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 138 --------------------------------------------------------------~~~~~~~~L~~GDv~~~P 155 (224)
+.....+.+++||++.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiP 185 (531)
T 3fz3_A 106 EQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIP 185 (531)
T ss_dssp -----------------------------------------------------------CCSCEESCCEEEETTEEEEEC
T ss_pred cccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEEC
Confidence 000224689999999999
Q ss_pred CCCeEEEEeCCCccEEEEEEecCCC--------Cceeecc----------------------------------------
Q 027345 156 IGMIHFQFNIGKTNAVAFASLGSQF--------PGVITIA---------------------------------------- 187 (224)
Q Consensus 156 ~G~~H~~~N~G~~~a~~~~~~~s~~--------pg~~~~~---------------------------------------- 187 (224)
+|+.||++|.|+++++++++++..| |..+.++
T Consensus 186 aG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (531)
T 3fz3_A 186 AGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQ 265 (531)
T ss_dssp TTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------------------------------
T ss_pred CCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhc
Confidence 9999999999999999999985432 2233332
Q ss_pred ---hhhhcCCCCCCHHHHHhhcCCCHHHHHHHhhh
Q 027345 188 ---DTVFGADPPINPDFLGKAFQLDPNVVKDLQKK 219 (224)
Q Consensus 188 ---~~~f~~~p~~~~~vla~af~~~~~~v~~l~~~ 219 (224)
.++|+ +|+.++|+.||++|.++++||++.
T Consensus 266 ~~~~nifs---GFs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 266 GNGNNVFS---GFNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp -CCSSGGG---GSCHHHHHHHHTSCHHHHHHHHTS
T ss_pred ccCCCeee---cCCHHHHHHHHCCCHHHHHHHhcc
Confidence 36888 699999999999999999999864
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.85 E-value=1.9e-20 Score=167.59 Aligned_cols=150 Identities=19% Similarity=0.220 Sum_probs=127.1
Q ss_pred CeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCC
Q 027345 59 DFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 59 df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~ 138 (224)
.|.|+....++.. ..|+.++.++..++|.+. ++++.++.++||+..++|||+++.|++||++|++++++++++
T Consensus 20 ~~~~~~~~~~~~~--~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~--- 92 (361)
T 2vqa_A 20 AFTYAFSKTPLVL--YDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPE--- 92 (361)
T ss_dssp CSEECGGGSCCEE--ETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTT---
T ss_pred ceEEEcccCCcee--cCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCC---
Confidence 3778876665433 468889999999999987 468999999999999999999899999999999999998764
Q ss_pred CeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCc---eeecchhhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 027345 139 NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPG---VITIADTVFGADPPINPDFLGKAFQLDPNVVKD 215 (224)
Q Consensus 139 ~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg---~~~~~~~~f~~~p~~~~~vla~af~~~~~~v~~ 215 (224)
++...+.|++||+++||+|.+|+++|.|+++++++++++..++. .+.+.++ |+ ++|.++|+++|+++.+.+++
T Consensus 93 g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~-~~---~~p~~vLa~~~~v~~~~~~~ 168 (361)
T 2vqa_A 93 GKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVTDW-LS---HTPIAWVEENLGWTAAQVAQ 168 (361)
T ss_dssp SCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHHHH-HH---TSCHHHHHHHHTCCHHHHTT
T ss_pred CcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHhHH-HH---hCCHHHHHHHhCcCHHHHHh
Confidence 43346899999999999999999999999999999999877664 4665554 56 39999999999999999998
Q ss_pred Hhhh
Q 027345 216 LQKK 219 (224)
Q Consensus 216 l~~~ 219 (224)
|++.
T Consensus 169 l~~~ 172 (361)
T 2vqa_A 169 LPKK 172 (361)
T ss_dssp SCSS
T ss_pred cccc
Confidence 8754
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.82 E-value=3.2e-19 Score=161.20 Aligned_cols=155 Identities=17% Similarity=0.181 Sum_probs=130.4
Q ss_pred CCCCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEec
Q 027345 55 AKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 134 (224)
Q Consensus 55 ~~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~ 134 (224)
..+..|+|+....++ . ...|+.++.+....+++.+ ++++.+++++||+..++|||+.+.|++||++|++++.+.++
T Consensus 221 ~~~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~ 296 (385)
T 1j58_A 221 EVPYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFAS 296 (385)
T ss_dssp CCSSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEE
T ss_pred CCCCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcC
Confidence 345678888876665 3 2446678888888887654 58899999999999999999966999999999999999755
Q ss_pred CCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecchhhhcCCCCCCHHHHHhhcCCCHHHHH
Q 027345 135 NQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVK 214 (224)
Q Consensus 135 ~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~~f~~~p~~~~~vla~af~~~~~~v~ 214 (224)
+ ++-.++.|++||++++|+|..|++.|.|++++++++++....+..+.+.+++ +. +++++++++|++++++++
T Consensus 297 ~---g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~~---~~~~v~~~~f~~~~~~~~ 369 (385)
T 1j58_A 297 D---GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-AM---LPETFVQAHLDLGKDFTD 369 (385)
T ss_dssp T---TEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-HT---SCHHHHHHHHTCCHHHHT
T ss_pred C---CcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-Hh---CCHHHHHHHhCCCHHHHH
Confidence 4 3334789999999999999999999999999999999988888888877774 43 999999999999999999
Q ss_pred HHhhhh
Q 027345 215 DLQKKF 220 (224)
Q Consensus 215 ~l~~~~ 220 (224)
+|++..
T Consensus 370 ~l~~~~ 375 (385)
T 1j58_A 370 VLSKEK 375 (385)
T ss_dssp TCCSSC
T ss_pred hhhccC
Confidence 998764
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.79 E-value=5.1e-19 Score=159.88 Aligned_cols=146 Identities=15% Similarity=0.203 Sum_probs=123.3
Q ss_pred eeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCC
Q 027345 60 FFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNN 139 (224)
Q Consensus 60 f~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~ 139 (224)
++|+....++.. ..|++++.++...+|.++ ++++.++++.||+..++|||+ +.|++||++|++++++++++ +
T Consensus 48 ~~~~~~~~~~~~--~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~---g 119 (385)
T 1j58_A 48 MKFSFSDTHNRL--EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEK---G 119 (385)
T ss_dssp CEECGGGSCCEE--ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTT---S
T ss_pred eEEEcccCCccc--cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCC---C
Confidence 777776655533 468889999999999988 789999999999999999999 89999999999999998765 5
Q ss_pred eEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCce---eecchhhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027345 140 TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGV---ITIADTVFGADPPINPDFLGKAFQLDPNVVKDL 216 (224)
Q Consensus 140 ~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~---~~~~~~~f~~~p~~~~~vla~af~~~~~~v~~l 216 (224)
+.+.+.|++||++++|+|..|+++|.+ ++++++.+|+...+.. +.+. ++|+ .+|.++|+++|++++++++++
T Consensus 120 ~~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~-~~~~---~~p~evla~~~~vs~~~~~~l 194 (385)
T 1j58_A 120 RSFIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLT-DWLA---HTPKEVIAANFGVTKEEISNL 194 (385)
T ss_dssp CEEEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHH-HHHH---TSCHHHHHHHHTCCTGGGTTS
T ss_pred cEEEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhh-hhhh---cccHHHHHHHhCCCHHHHHhc
Confidence 555679999999999999999999997 4688888898877653 3343 4566 399999999999999988887
Q ss_pred hh
Q 027345 217 QK 218 (224)
Q Consensus 217 ~~ 218 (224)
++
T Consensus 195 ~~ 196 (385)
T 1j58_A 195 PG 196 (385)
T ss_dssp CS
T ss_pred cc
Confidence 64
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.78 E-value=1.6e-19 Score=129.87 Aligned_cols=73 Identities=25% Similarity=0.185 Sum_probs=68.9
Q ss_pred eecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecC
Q 027345 62 LSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 135 (224)
Q Consensus 62 ~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 135 (224)
|+++++.+.++|..|. ++.+++.++|+|+++|+|++|+++.||++.+||||+||+|++||++|++++++++++
T Consensus 4 fnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp EETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred cccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 7888999998888776 599999999999999999999999999999999999999999999999999999875
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=1.1e-14 Score=110.90 Aligned_cols=84 Identities=18% Similarity=0.213 Sum_probs=72.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
++.+.++.++||+..++|||+...|++||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|.++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~-----~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l 110 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGN-----GI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFV 110 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECST-----TC--EEEEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECC-----Ce--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEE
Confidence 5688899999999999999996699999999999987622 22 5899999999999999999999999999999
Q ss_pred EEecCCCCcee
Q 027345 174 ASLGSQFPGVI 184 (224)
Q Consensus 174 ~~~~s~~pg~~ 184 (224)
+++....++..
T Consensus 111 ~v~~p~~~~~~ 121 (125)
T 3h8u_A 111 SVVAPGNAGFA 121 (125)
T ss_dssp EEEESTTCCCC
T ss_pred EEECCCcccch
Confidence 99876665543
No 35
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.54 E-value=4.9e-14 Score=112.71 Aligned_cols=117 Identities=15% Similarity=0.174 Sum_probs=86.6
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCC-CCeEEEEEEcCCCEEEEcCCCeEEEEeCC-CccEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL-NNTLIAKVLNKGDVFVFPIGMIHFQFNIG-KTNAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~~~~L~~GDv~~~P~G~~H~~~N~G-~~~a~ 171 (224)
++.+.++.++||+..++|+|+ ..|++||++|++++.+.+..+. .++...+.|++||++++|+|..|.++|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 578889999999999999997 7899999999999998762100 01223689999999999999999999999 89999
Q ss_pred EEEEecCCCCceeecchhhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 027345 172 AFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKD 215 (224)
Q Consensus 172 ~~~~~~s~~pg~~~~~~~~f~~~p~~~~~vla~af~~~~~~v~~ 215 (224)
+++++............++ . ++....+...+.++++.+++
T Consensus 119 ~l~i~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAKIFLYDDWS-M---PHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCCEEEESSTT-S---CGGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCcccccccccc-c---CCcCccceeccccccccccc
Confidence 9988865443433333332 1 13444445556677777665
No 36
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.52 E-value=2.8e-14 Score=122.18 Aligned_cols=118 Identities=15% Similarity=0.075 Sum_probs=85.4
Q ss_pred CCCCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEE---
Q 027345 55 AKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGF--- 131 (224)
Q Consensus 55 ~~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~--- 131 (224)
.+.+||.+..+..+....++.|-....+. +...+.++++.++.++||+..++|+|+++.|++||++|++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~ 82 (239)
T 2xlg_A 7 HTFDDIPMPKLADPLLIYTPANEIFDIAS----CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTK 82 (239)
T ss_dssp CBCSCCCCCCCSSCEEEECTTCCEEEEEE----EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEE
T ss_pred cchhhCCCccccccceeecCCceEEEEec----cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEec
Confidence 34566665555444333233333222221 22334468899999999999999999989999999999999988
Q ss_pred -----EecC----CCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE-EEEe
Q 027345 132 -----VTSN----QLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA-FASL 176 (224)
Q Consensus 132 -----~~~~----~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~-~~~~ 176 (224)
.++. .+.++.+.+.+++||++++|+|.+|.++|.+++++++ +..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 83 QYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp ECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred ccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 3320 0013556799999999999999999999999999988 6666
No 37
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.52 E-value=7.9e-14 Score=111.25 Aligned_cols=85 Identities=20% Similarity=0.159 Sum_probs=73.0
Q ss_pred ceEEEEEEEcCCC-cCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCC-CeEEEEeCCCccEE
Q 027345 94 GISAVRIDYAPYG-QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIG-MIHFQFNIGKTNAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg-~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G-~~H~~~N~G~~~a~ 171 (224)
++.+.++.++||+ ..++|||+...|++||++|++++.+.++ .+.|++||++++|+| ..|.+.|.++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~--------~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~ 116 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEND--------QYPIAPGDFVGFPCHAAAHSISNDGTETLV 116 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTE--------EEEECTTCEEEECTTSCCEEEECCSSSCEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCE--------EEEeCCCCEEEECCCCceEEeEeCCCCCEE
Confidence 6788999999999 5999999768999999999999987533 589999999999998 99999999999999
Q ss_pred EEEEecCCCCceeec
Q 027345 172 AFASLGSQFPGVITI 186 (224)
Q Consensus 172 ~~~~~~s~~pg~~~~ 186 (224)
++++.....+....+
T Consensus 117 ~l~v~~p~~~~~~~~ 131 (162)
T 3l2h_A 117 CLVIGQRLDQDVVDY 131 (162)
T ss_dssp EEEEEECCSEEEEEE
T ss_pred EEEEECCCCCCeEec
Confidence 998876554433333
No 38
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.50 E-value=6.7e-14 Score=102.73 Aligned_cols=77 Identities=18% Similarity=0.251 Sum_probs=67.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+.+.+++++||+..++|.|+...|++||++|++++.+.+ +. ..+.|++||++++|+|..|...|.|+++++++
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~-----g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE-----GS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT-----EE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC-----CC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 6889999999999999999996567999999999998753 10 15899999999999999999999999999888
Q ss_pred EEe
Q 027345 174 ASL 176 (224)
Q Consensus 174 ~~~ 176 (224)
.+-
T Consensus 91 ~v~ 93 (97)
T 2fqp_A 91 EIE 93 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 39
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.49 E-value=1.3e-13 Score=100.23 Aligned_cols=78 Identities=18% Similarity=0.144 Sum_probs=69.2
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
+.++.+.++.++||...++|+|+...|++||++|++++.+.++ .+.+++||++++|+|..|.+.|.++++++
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~--------~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~ 96 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEE--------EALLAPGMAAFAPAGAPHGVRNESASPAL 96 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTE--------EEEECTTCEEEECTTSCEEEECCSSSCEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCE--------EEEeCCCCEEEECCCCcEEeEeCCCCCEE
Confidence 3468899999999999999999866899999999999887432 58999999999999999999999999999
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
+++++.
T Consensus 97 ~~~v~~ 102 (105)
T 1v70_A 97 LLVVTA 102 (105)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 988765
No 40
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.48 E-value=7.9e-13 Score=106.91 Aligned_cols=117 Identities=14% Similarity=0.138 Sum_probs=86.1
Q ss_pred CCCCCCCeeeecCCCCCC---ccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEE
Q 027345 53 KLAKAEDFFLSGLDKPGN---TANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYV 129 (224)
Q Consensus 53 ~~~~~~df~~~~~~~~~~---~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~ 129 (224)
+-+..+++.+.......- .....|...+....... +....++.+.++.++||+..++|||+ ..|++||++|++++
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 445566666666443211 11134554444433322 22334788999999999999999997 89999999999999
Q ss_pred EEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC-CccEEEEEEecCC
Q 027345 130 GFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG-KTNAVAFASLGSQ 179 (224)
Q Consensus 130 ~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G-~~~a~~~~~~~s~ 179 (224)
.+.++ .+.|++||++++|+|..|.+.|.+ ++++.+++++...
T Consensus 90 ~i~~~--------~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VLDDR--------VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EETTE--------EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EECCE--------EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 87533 689999999999999999999999 9999999888644
No 41
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.47 E-value=5.5e-13 Score=105.14 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=71.9
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+.++.+.||+..++|||+...|++||++|++++.+.+... ...+.+.|++||++++|+|..|.+.|.+++++++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~--~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~ 118 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD--NLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKL 118 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTT--BCCEEEEEETTCEEEECTTCEEEEEECSSSCEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccc--cceeeEEECCCCEEEECCCCcEEEEECCCCCEEE
Confidence 35788899999999999999986779999999999999876521 1123489999999999999999999999999998
Q ss_pred EEEecCC
Q 027345 173 FASLGSQ 179 (224)
Q Consensus 173 ~~~~~s~ 179 (224)
++++...
T Consensus 119 l~i~~~~ 125 (148)
T 2oa2_A 119 YSIYAPP 125 (148)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 8877543
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.46 E-value=4.3e-13 Score=107.94 Aligned_cols=85 Identities=19% Similarity=0.138 Sum_probs=72.9
Q ss_pred cceEEEEEEEcCCCcC-CCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCC--CeEEEEeCCCcc
Q 027345 93 LGISAVRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIG--MIHFQFNIGKTN 169 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~-ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G--~~H~~~N~G~~~ 169 (224)
..+.+.+++++||+.. ++|||+..+|++||++|++++.+.++ .+.|++||++++|+| ..|.++|.++++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~--------~~~l~~GD~i~ip~~~~~~H~~~n~~~~~ 112 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG--------EHPMVPGDCAAFPAGDPNGHQFVNRTDAP 112 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE--------EEEECTTCEEEECTTCCCCBEEECCSSSC
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE--------EEEeCCCCEEEECCCCCcceEEEECCCCC
Confidence 3688999999999965 89999855799999999999987533 589999999999999 999999999999
Q ss_pred EEEEEEecCCCCceee
Q 027345 170 AVAFASLGSQFPGVIT 185 (224)
Q Consensus 170 a~~~~~~~s~~pg~~~ 185 (224)
++++++..........
T Consensus 113 ~~~l~v~~p~~~d~~~ 128 (163)
T 3i7d_A 113 ATFLVVGTRTPTETAY 128 (163)
T ss_dssp EEEEEEEECCSCEEEE
T ss_pred EEEEEEECCCCCCccc
Confidence 9999988765544433
No 43
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.44 E-value=3.9e-13 Score=109.74 Aligned_cols=80 Identities=18% Similarity=0.187 Sum_probs=72.1
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
.|..+.+++++||+..++|.|+ ..|++||++|++++.+.+. + ++.|++||++ ||+|..|.++|.|++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~g-----e--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~ 147 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDDG-----A--KRTVRQGGII-VQRGTNHLWRNTTDKPCRI 147 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGGG-----C--EEEECTTCEE-EECSCCBEEECCSSSCEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECCC-----e--EEEECCCCEE-EeCCCcEEEEeCCCCCEEE
Confidence 4889999999999999999997 7899999999999987522 1 5899999999 9999999999999999999
Q ss_pred EEEecCCCC
Q 027345 173 FASLGSQFP 181 (224)
Q Consensus 173 ~~~~~s~~p 181 (224)
++++....|
T Consensus 148 l~V~~P~~p 156 (172)
T 3es1_A 148 AFILIEAPA 156 (172)
T ss_dssp EEEEEECCC
T ss_pred EEEEcCCCc
Confidence 999887666
No 44
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.44 E-value=6.4e-13 Score=103.00 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=71.8
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEE--EEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVG--FVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~--~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
..+.+.++.++||+..++|+|+ ..|++||++|++++. +. ++ .+.+++||++++|+|..|.++|.+++++
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 107 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQ------GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTC 107 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGG------TE--EEEECTTCEEEECTTCCBEEECCTTCCE
T ss_pred CcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeEC------CE--EEEECCCCEEEECCCCeEEeEcCCCCCE
Confidence 3688999999999999999998 788899999999988 43 22 6899999999999999999999999999
Q ss_pred EEEEEecCCCCce
Q 027345 171 VAFASLGSQFPGV 183 (224)
Q Consensus 171 ~~~~~~~s~~pg~ 183 (224)
++++++....+..
T Consensus 108 ~~l~i~~~~~~~~ 120 (145)
T 3ht1_A 108 RFLVVAPCERPPV 120 (145)
T ss_dssp EEEEEEESCCCCC
T ss_pred EEEEEECCCCCCe
Confidence 9998887665554
No 45
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.44 E-value=7.2e-13 Score=98.05 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=69.2
Q ss_pred cceEEEEEEEcCCCcCCCc--cCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 93 LGISAVRIDYAPYGQNPPH--THPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH--~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
.++.+.++.++||+..++| +|++..|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.+++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~------~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~ 90 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDG------H--TQALQAGSLIAIERGQAHEIRNTGDTPL 90 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETT------E--EEEECTTEEEEECTTCCEEEECCSSSCE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECC------E--EEEeCCCCEEEECCCCcEEeEcCCCCCE
Confidence 3678999999999998888 9986899999999999998743 2 5899999999999999999999999999
Q ss_pred EEEEEecC
Q 027345 171 VAFASLGS 178 (224)
Q Consensus 171 ~~~~~~~s 178 (224)
++++++..
T Consensus 91 ~~~~v~~~ 98 (113)
T 2gu9_A 91 KTVNFYHP 98 (113)
T ss_dssp EEEEEEES
T ss_pred EEEEEECC
Confidence 98887754
No 46
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.43 E-value=2.5e-12 Score=106.01 Aligned_cols=84 Identities=19% Similarity=0.156 Sum_probs=73.7
Q ss_pred cceEEEEEEEcCCCc------CCCccCCC--CcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEe
Q 027345 93 LGISAVRIDYAPYGQ------NPPHTHPR--ATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFN 164 (224)
Q Consensus 93 ~gis~~~v~l~pgg~------~ppH~Hp~--a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N 164 (224)
..+.+..+.++||+. .++|+|+. ..|++||++|++.+.+.++. ++.+.+.|++||++++|+|..|.+.|
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~---g~~~~~~l~~GD~v~ip~g~~H~~~N 141 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE---GDAKWISMEPGTVVYVPPYWAHRTVN 141 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT---CCEEEEEECTTCEEEECTTCEEEEEE
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC---CcEEEEEECCCcEEEECCCCeEEEEE
Confidence 367888889999998 88999983 47999999999999998764 56667999999999999999999999
Q ss_pred CCCccEEEEEEecCC
Q 027345 165 IGKTNAVAFASLGSQ 179 (224)
Q Consensus 165 ~G~~~a~~~~~~~s~ 179 (224)
.|++++++++++...
T Consensus 142 ~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 142 IGDEPFIFLAIYPAD 156 (190)
T ss_dssp CSSSCEEEEEEEETT
T ss_pred CCcccEEEEEEECCC
Confidence 999999999887643
No 47
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.42 E-value=5.1e-13 Score=101.15 Aligned_cols=76 Identities=20% Similarity=0.262 Sum_probs=65.2
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
+.++.+.++.++||...++|||+ ..|++||++|++++.+.++ ++.|++||.+++|+|..|.++|.++....
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~~~--------~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ 103 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVA-GPSTIQCLEGEVEIGVDGA--------QRRLHQGDLLYLGAGAAHDVNAITNTSLL 103 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCS-SCEEEEEEESCEEEEETTE--------EEEECTTEEEEECTTCCEEEEESSSEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCC-CcEEEEEEECEEEEEECCE--------EEEECCCCEEEECCCCcEEEEeCCCcEEE
Confidence 34689999999999999999998 6899999999999987533 58999999999999999999998766655
Q ss_pred EEEEe
Q 027345 172 AFASL 176 (224)
Q Consensus 172 ~~~~~ 176 (224)
++.++
T Consensus 104 ~~~v~ 108 (114)
T 3fjs_A 104 VTVVL 108 (114)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 54443
No 48
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.41 E-value=1.5e-13 Score=101.88 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=67.7
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
+-.+.+.|++++||+..++|+|+...|+++|++|++++...+ ++.....+++||.+++|+|..|.+.|.|+++++
T Consensus 14 n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d-----~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~ 88 (98)
T 3lag_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD-----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIV 88 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT-----SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEE
T ss_pred CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC-----CceEEEEecCCcEEEEcCCCcEECEECCCCeEE
Confidence 346889999999999999999998789999999999987543 232356799999999999999999999999999
Q ss_pred EEEE
Q 027345 172 AFAS 175 (224)
Q Consensus 172 ~~~~ 175 (224)
++.+
T Consensus 89 ~IeV 92 (98)
T 3lag_A 89 FLEI 92 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9876
No 49
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.40 E-value=1.1e-12 Score=105.15 Aligned_cols=78 Identities=10% Similarity=0.016 Sum_probs=70.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+.++.++||+..++|||+ ..|++||++|++++.+.++ .+.|++||++++|+|..|.+.|.+++++.+
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~g~--------~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~ 112 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVGET--------ISDVAQGDLVFIPPMTWHQFRANRGDCLGF 112 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEETTE--------EEEEETTCEEEECTTCCEEEECCSSSCEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEECCE--------EEEeCCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 4688999999999999999998 7899999999999987433 589999999999999999999999999999
Q ss_pred EEEecCC
Q 027345 173 FASLGSQ 179 (224)
Q Consensus 173 ~~~~~s~ 179 (224)
+++++..
T Consensus 113 l~i~~~~ 119 (156)
T 3kgz_A 113 LCVVNAA 119 (156)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 9988654
No 50
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.40 E-value=8.7e-13 Score=100.33 Aligned_cols=77 Identities=22% Similarity=0.352 Sum_probs=68.2
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.++.++||+..++|+|+ ..|++||++|++++.+.+. .+.|++||++++|+|..|.+.|.++ ++++
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~--------~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~ 108 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTIGEE--------TRVLRPGMAYTIPGGVRHRARTFED-GCLV 108 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEETTE--------EEEECTTEEEEECTTCCEEEECCTT-CEEE
T ss_pred CCeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEECCE--------EEEeCCCCEEEECCCCcEEeEECCC-CEEE
Confidence 3688999999999999999998 6999999999999987432 5899999999999999999999987 7888
Q ss_pred EEEecCC
Q 027345 173 FASLGSQ 179 (224)
Q Consensus 173 ~~~~~s~ 179 (224)
+.++...
T Consensus 109 l~v~~p~ 115 (126)
T 4e2g_A 109 LDIFSPP 115 (126)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 8887643
No 51
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.40 E-value=2.3e-12 Score=105.58 Aligned_cols=82 Identities=17% Similarity=0.174 Sum_probs=69.5
Q ss_pred CCccceEEEEEEEcCCCcCC---CccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC-
Q 027345 90 LNTLGISAVRIDYAPYGQNP---PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI- 165 (224)
Q Consensus 90 l~~~gis~~~v~l~pgg~~p---pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~- 165 (224)
..+..+.+.+++++||+..+ +|+|+ +.|++||++|++++.+.+. +....+.|++||.++||++.+|.+.|.
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~-~~E~~~Vl~G~~~~~~~~~----~~~~~~~l~~GD~~~~~~~~~H~~~n~~ 186 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHA-GNEFLFVLEGEIHMKWGDK----ENPKEALLPTGASMFVEEHVPHAFTAAK 186 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCS-SCEEEEEEESCEEEEESCT----TSCEEEEECTTCEEEECTTCCEEEEEST
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCC-CeEEEEEEeeeEEEEECCc----CCcccEEECCCCEEEeCCCCceEEEecC
Confidence 34456899999999999776 79998 6999999999999998651 111268999999999999999999999
Q ss_pred CCccEEEEEEe
Q 027345 166 GKTNAVAFASL 176 (224)
Q Consensus 166 G~~~a~~~~~~ 176 (224)
+++++++++++
T Consensus 187 ~~~~~~~l~v~ 197 (198)
T 2bnm_A 187 GTGSAKLIAVN 197 (198)
T ss_dssp TSCCEEEEEEE
T ss_pred CCCCeEEEEEe
Confidence 99999998875
No 52
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.39 E-value=1.5e-12 Score=100.87 Aligned_cols=77 Identities=22% Similarity=0.151 Sum_probs=68.0
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
+..+.+.++.++||+..++|+|+...|++||++|++++.+.++ .+.|++||++++|+|..|.+.|.++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~--------~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~ 125 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGK--------DVPIKAGDVCFTDSGESHSIENTGNTDLE 125 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTE--------EEEEETTEEEEECTTCEEEEECCSSSCEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEECCE--------EEEeCCCcEEEECCCCcEEeEECCCCCEE
Confidence 3457788999999999999999856899999999999987532 58999999999999999999999999999
Q ss_pred EEEEe
Q 027345 172 AFASL 176 (224)
Q Consensus 172 ~~~~~ 176 (224)
++++.
T Consensus 126 ~l~v~ 130 (133)
T 1o4t_A 126 FLAVI 130 (133)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 53
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.39 E-value=2.5e-12 Score=96.79 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=65.9
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEE-EEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAK-VLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~-~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
++.+.++.+.||+..++|||+ ..|++||++|++++.+.+. .+ .|++||++++|+|..|.+.|.+++++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~~--------~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~ 96 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLEDQ--------EPHNYKEGNIVYVPFNVKMLIQNINSDILEF 96 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEETTS--------CCEEEETTCEEEECTTCEEEEECCSSSEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEECCE--------EEEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 567888899999999999997 8999999999999987543 36 9999999999999999999999998888
Q ss_pred EEEe
Q 027345 173 FASL 176 (224)
Q Consensus 173 ~~~~ 176 (224)
+++.
T Consensus 97 l~i~ 100 (117)
T 2b8m_A 97 FVVK 100 (117)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 54
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.38 E-value=1.5e-12 Score=105.43 Aligned_cols=78 Identities=12% Similarity=0.041 Sum_probs=70.2
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.+++++||+..++|||+ ..|++||++|++++.+.+ + .+.+++||++++|+|..|.+.|.+++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v~g------~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~ 121 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMVGR------A--VSAVAPYDLVTIPGWSWHQFRAPADEALGF 121 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEETT------E--EEEECTTCEEEECTTCCEEEECCTTSCEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEECC------E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 4688999999999999999998 689999999999988743 2 689999999999999999999999999999
Q ss_pred EEEecCC
Q 027345 173 FASLGSQ 179 (224)
Q Consensus 173 ~~~~~s~ 179 (224)
+++....
T Consensus 122 l~i~~~~ 128 (166)
T 3jzv_A 122 LCMVNAE 128 (166)
T ss_dssp EEEEESS
T ss_pred EEEEccC
Confidence 9888643
No 55
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.36 E-value=5.1e-12 Score=99.79 Aligned_cols=78 Identities=21% Similarity=0.339 Sum_probs=69.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEE-EEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIA-KVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~-~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
.++.+.++.++||+..++|+|+ ..|++||++|++++.+.++ . +.|++||++++|+|..|+..|.+++++.
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~--------~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 116 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHP-GGQILIVTRGKGFYQERGK--------PARILKKGDVVEIPPNVVHWHGAAPDEELV 116 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECT-TCEEEEEEEEEEEEEETTS--------CCEEEETTCEEEECTTCCEEEEEBTTBCEE
T ss_pred CcEEEEEEEECCCCccCceECC-CceEEEEEeCEEEEEECCE--------EEEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 4688999999999999999998 5999999999999987533 3 7999999999999999999999999999
Q ss_pred EEEEecCC
Q 027345 172 AFASLGSQ 179 (224)
Q Consensus 172 ~~~~~~s~ 179 (224)
+++++...
T Consensus 117 ~l~v~~~~ 124 (147)
T 2f4p_A 117 HIGISTQV 124 (147)
T ss_dssp EEEEECCG
T ss_pred EEEEEccC
Confidence 98887543
No 56
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.35 E-value=3.6e-12 Score=95.37 Aligned_cols=75 Identities=23% Similarity=0.297 Sum_probs=65.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
++.+.++.++||...++|+|+ ..|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.+ ++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~------~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l 101 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVDG------V--IKVLTAGDSFFVPPHVDHGAVCPT--GGILI 101 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEETT------E--EEEECTTCEEEECTTCCEEEEESS--CEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEECC------E--EEEeCCCCEEEECcCCceeeEeCC--CcEEE
Confidence 478899999999999999998 899999999999988742 2 589999999999999999999987 67777
Q ss_pred EEecCC
Q 027345 174 ASLGSQ 179 (224)
Q Consensus 174 ~~~~s~ 179 (224)
.++...
T Consensus 102 ~v~~p~ 107 (116)
T 2pfw_A 102 DTFSPA 107 (116)
T ss_dssp EEEESC
T ss_pred EEECCc
Confidence 777544
No 57
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.35 E-value=7.5e-12 Score=95.32 Aligned_cols=75 Identities=16% Similarity=0.271 Sum_probs=67.1
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+....++||...++|||. ..|++||++|++++.+.+. .+.+++||++++|+|..|.+.|.+++++.+
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~~~--------~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 102 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRINDE--------DFPVTKGDLIIIPLDSEHHVINNNQEDFHF 102 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEETTE--------EEEEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEECCE--------EEEECCCcEEEECCCCcEEeEeCCCCCEEE
Confidence 4578889999999999999996 8999999999999987432 589999999999999999999999998888
Q ss_pred EEEe
Q 027345 173 FASL 176 (224)
Q Consensus 173 ~~~~ 176 (224)
+++.
T Consensus 103 ~~i~ 106 (128)
T 4i4a_A 103 YTIW 106 (128)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 58
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.35 E-value=2.8e-12 Score=98.27 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=68.8
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
+.++.+.++.++||+..++|+|+ ..|++||++|++++.+.++ .+.+++||++++|+|..|.+.|.+++++.
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~~--------~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~ 115 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKEQG--------EETVEEGFYIFVEPNEIHGFRNDTDSEVE 115 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECSSC--------EEEEETTEEEEECTTCCEEEECCSSSCEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEECCE--------EEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 44789999999999999999998 8999999999999887533 58999999999999999999999999998
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
+++++.
T Consensus 116 ~l~v~~ 121 (126)
T 1vj2_A 116 FLCLIP 121 (126)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 887764
No 59
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.33 E-value=5.8e-12 Score=96.93 Aligned_cols=79 Identities=16% Similarity=0.142 Sum_probs=60.0
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 95 ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
+.+.++.++||+..++|+|+...|++||++|++++.+.+. + .+.|++||++++|+|..|.+.|.+++ +.+++
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~~-----~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~ 114 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYEDI-----G--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLE 114 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETTT-----E--EEEEETTCEEECCTTCCEEEEEECTT-CEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECCc-----E--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEE
Confidence 4566666778999999999856999999999999987541 2 58999999999999999999998774 57776
Q ss_pred EecCCCC
Q 027345 175 SLGSQFP 181 (224)
Q Consensus 175 ~~~s~~p 181 (224)
++.....
T Consensus 115 ~~~p~~~ 121 (134)
T 2o8q_A 115 IVSPAGF 121 (134)
T ss_dssp EESSTTC
T ss_pred EECCCch
Confidence 6654443
No 60
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.32 E-value=6.3e-12 Score=95.75 Aligned_cols=79 Identities=14% Similarity=0.064 Sum_probs=65.6
Q ss_pred ccceEEEEEEEcCCCcCC-CccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 92 TLGISAVRIDYAPYGQNP-PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~p-pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
..++.+.++.+.||...+ +|+|+...+++||++|++++.+.++ .+.|++||++++|+|..|.+.|.+++++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~--------~~~l~~Gd~i~i~~~~~H~~~~~~~~~~ 94 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGE--------KIELQAGDWLRIAPDGKRQISAASDSPI 94 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTE--------EEEEETTEEEEECTTCCEEEEEBTTBCE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCE--------EEEeCCCCEEEECCCCcEEEEcCCCCCE
Confidence 446788888999999888 8999843345559999999987432 5899999999999999999999999998
Q ss_pred EEEEEecC
Q 027345 171 VAFASLGS 178 (224)
Q Consensus 171 ~~~~~~~s 178 (224)
.++++...
T Consensus 95 ~~~~i~~~ 102 (125)
T 3cew_A 95 GFLCIQVK 102 (125)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 88876643
No 61
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.32 E-value=6.2e-12 Score=102.02 Aligned_cols=75 Identities=19% Similarity=0.117 Sum_probs=65.6
Q ss_pred ceEEEEEEEcC-CCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 94 GISAVRIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 94 gis~~~v~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
-+...+++++| |+...+|.|.++.|++||++|++++.+.++ .+.|++||.+++|+|..|.++|.+++++++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~--------~~~L~~Gds~~iP~g~~H~~~N~~d~~Arl 158 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKN--------KFLSVKGSTFQIPAFNEYAIANRGNDEAKM 158 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTE--------EEEEETTCEEEECTTCEEEEEECSSSCEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCE--------EEEEcCCCEEEECCCCCEEEEECCCCCEEE
Confidence 36777899999 777777666669999999999999998543 589999999999999999999999999999
Q ss_pred EEEe
Q 027345 173 FASL 176 (224)
Q Consensus 173 ~~~~ 176 (224)
+++.
T Consensus 159 l~Vq 162 (166)
T 2vpv_A 159 FFVQ 162 (166)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.31 E-value=1e-11 Score=92.73 Aligned_cols=73 Identities=12% Similarity=0.236 Sum_probs=62.8
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.++.++||...++|+|+ ..|++||++|++++.+.+ + .+.+++||++++|+|..|.+.|.+ ++.+
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~~------~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~ 106 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITIDQ------E--TYRVAEGQTIVMPAGIPHALYAVE--AFQM 106 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEETT------E--EEEEETTCEEEECTTSCEEEEESS--CEEE
T ss_pred CceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEECC------E--EEEECCCCEEEECCCCCEEEEECC--CceE
Confidence 3578889999999999999998 799999999999988743 2 589999999999999999999987 4556
Q ss_pred EEEe
Q 027345 173 FASL 176 (224)
Q Consensus 173 ~~~~ 176 (224)
++++
T Consensus 107 ~~v~ 110 (115)
T 1yhf_A 107 LLVV 110 (115)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 63
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.31 E-value=7.2e-12 Score=102.31 Aligned_cols=77 Identities=21% Similarity=0.182 Sum_probs=66.0
Q ss_pred CccceEEEEEEEcCCCcCC--CccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCc
Q 027345 91 NTLGISAVRIDYAPYGQNP--PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKT 168 (224)
Q Consensus 91 ~~~gis~~~v~l~pgg~~p--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~ 168 (224)
.+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+.++ .+.|++||+++||+|.+|.++|.+++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~~~--------~~~l~~GD~i~i~~~~~H~~~n~~~~ 170 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFDEQ--------WHELQQGEHIRFFSDQPHGYAAVTEK 170 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEETTE--------EEEECTTCEEEEECSSSEEEEESSSC
T ss_pred CCCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEECCE--------EEEeCCCCEEEEcCCCCeEeECCCCC
Confidence 3456889999999999765 77776 7899999999999987533 58999999999999999999999999
Q ss_pred cEEEEEEec
Q 027345 169 NAVAFASLG 177 (224)
Q Consensus 169 ~a~~~~~~~ 177 (224)
++ +++++.
T Consensus 171 ~~-~l~v~~ 178 (192)
T 1y9q_A 171 AV-FQNIVA 178 (192)
T ss_dssp EE-EEEEEE
T ss_pred cE-EEEEEe
Confidence 99 776653
No 64
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.31 E-value=2.3e-12 Score=95.68 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=64.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+.+.+++++||+..++|.|+...+++++++|++++.. .+ ++.....+++||++++|+|..|+..|.|+++++++
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~d---G~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi 90 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PD---GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TT---SCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--CC---CcEEEEEECCCCEEEECCCCceeCEECCCCCEEEE
Confidence 68899999999999999999866566677788888664 22 22124689999999999999999999999999999
Q ss_pred EEe
Q 027345 174 ASL 176 (224)
Q Consensus 174 ~~~ 176 (224)
++-
T Consensus 91 ~vE 93 (98)
T 2ozi_A 91 EIE 93 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.30 E-value=8.3e-12 Score=107.24 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=66.7
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCC-ccE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGK-TNA 170 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~-~~a 170 (224)
...+.+.++.++||+..++|+|+...|++||++|++++.+.++ .+.|++||++++|+|..|+++|.|+ +++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~--------~~~l~~GD~i~~~~~~~H~~~n~g~~~~~ 247 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN--------WIPVKKGDYIFMGAYSLQAGYGVGRGEAF 247 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSC--------EEEEETTCEEEECSSEEEEEEEC----CE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCE--------EEEeCCCCEEEECCCCcEEeEeCCCCcCE
Confidence 4468899999999999999999878999999999999987533 5899999999999999999999999 999
Q ss_pred EEEEEec
Q 027345 171 VAFASLG 177 (224)
Q Consensus 171 ~~~~~~~ 177 (224)
++++..+
T Consensus 248 ~~l~~~d 254 (261)
T 1rc6_A 248 SYIYSKD 254 (261)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8887654
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.27 E-value=1.2e-11 Score=105.15 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=69.0
Q ss_pred ceEEEEEEEcC-CCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 94 GISAVRIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 94 gis~~~v~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
-+.+..+.++| |+..++|||+ ..|++||++|++++.+.++ .+.|++||++++|+|..|.++|.|++++++
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~~~--------~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 214 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVEGC--------TVEMKFGTAYFCEPREDHGAINRSEKESKS 214 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEETTE--------EEEECTTCEEEECTTCCEEEEECSSSCEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEECCE--------EEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 35677788999 8889999998 6899999999999987533 588999999999999999999999999999
Q ss_pred EEEecCCCC
Q 027345 173 FASLGSQFP 181 (224)
Q Consensus 173 ~~~~~s~~p 181 (224)
+.++.....
T Consensus 215 l~v~~p~~~ 223 (243)
T 3h7j_A 215 INIFFPPRY 223 (243)
T ss_dssp EEEEESCSS
T ss_pred EEEEcCChh
Confidence 999875433
No 67
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.25 E-value=4.1e-11 Score=89.61 Aligned_cols=72 Identities=14% Similarity=0.114 Sum_probs=61.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+.+..+.+.||...++|+|+ ..|++||++|++++.+.++ .+.|++||++++|+|.+|..+|. +++.++
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~~~--------~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~ 105 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFDDQ--------KIDLVPEDVLMVPAHKIHAIAGK--GRFKML 105 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEETTE--------EEEECTTCEEEECTTCCBEEEEE--EEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEECCE--------EEEecCCCEEEECCCCcEEEEeC--CCcEEE
Confidence 356777788999999999998 8999999999999987432 58999999999999999999996 466666
Q ss_pred EEe
Q 027345 174 ASL 176 (224)
Q Consensus 174 ~~~ 176 (224)
++.
T Consensus 106 ~i~ 108 (114)
T 2ozj_A 106 QIT 108 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 68
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.24 E-value=3.6e-11 Score=88.65 Aligned_cols=76 Identities=21% Similarity=0.215 Sum_probs=62.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEE-EEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEI-LVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
.++.+.++.+.||...++|+|+...|+ +||++|++++.+.+. + .+.|++||++++|+|..|.+.|.++ +.
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~-----~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~ 101 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGD-----A--VIPAPRGAVLVAPISTPHGVRAVTD--MK 101 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGG-----C--EEEECTTEEEEEETTSCEEEEESSS--EE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCC-----E--EEEECCCCEEEeCCCCcEEEEEcCC--cE
Confidence 357888999999999999999854788 899999999887421 1 5899999999999999999999875 45
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
++.++.
T Consensus 102 ~l~~~~ 107 (110)
T 2q30_A 102 VLVTIA 107 (110)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 555553
No 69
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.23 E-value=7.6e-11 Score=102.04 Aligned_cols=108 Identities=10% Similarity=0.049 Sum_probs=80.1
Q ss_pred CCCCeeeecCCCCCCc-cCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCEEEEEEEe
Q 027345 56 KAEDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVT 133 (224)
Q Consensus 56 ~~~df~~~~~~~~~~~-~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~ 133 (224)
.+..++.+.-..+... ....|..++.+... ..+..+.+.++.++||+..++ |+|+ ..|++||++|++++.+.+
T Consensus 146 ~p~~~v~~~~d~~~~~~~~~~g~~~~~l~~~----~~~~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~~ 220 (274)
T 1sef_A 146 QPYKVVGSIHDQQPEEYEGMTDVLLWSLLPK----EFDFDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLDN 220 (274)
T ss_dssp CCCCEEEEGGGSCCEEGGGCTTEEEEECSCS----STTCSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEETT
T ss_pred CCcceeCChHHCCccccCCCCCeEEEEeCCc----ccCCCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEECC
Confidence 3445555544333321 12345444444322 223468899999999999998 9997 799999999999998853
Q ss_pred cCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCC-ccEEEEEEe
Q 027345 134 SNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGK-TNAVAFASL 176 (224)
Q Consensus 134 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~-~~a~~~~~~ 176 (224)
+ .+.|++||+++||++.+|.++|.++ +++++++..
T Consensus 221 ~--------~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~ 256 (274)
T 1sef_A 221 E--------WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSK 256 (274)
T ss_dssp E--------EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred E--------EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEE
Confidence 3 5899999999999999999999999 888888764
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.21 E-value=5.3e-11 Score=104.59 Aligned_cols=78 Identities=19% Similarity=0.114 Sum_probs=68.4
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+++.++.+.||+..++|||++..|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.++ ++++
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~------~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~ 114 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDG------E--RYLLISGDYANIPAGTPHSYRMQSH-RTRL 114 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETT------E--EEEECTTCEEEECTTCCEEEEECST-TEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECC------E--EEEECCCCEEEECCCCcEEEEECCC-CeEE
Confidence 36889999999999999999987899999999999998743 2 5899999999999999999999987 6888
Q ss_pred EEEecCC
Q 027345 173 FASLGSQ 179 (224)
Q Consensus 173 ~~~~~s~ 179 (224)
+.++...
T Consensus 115 ~~~~~p~ 121 (337)
T 1y3t_A 115 VSYTMKG 121 (337)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 8776543
No 71
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.17 E-value=1.3e-10 Score=104.48 Aligned_cols=77 Identities=21% Similarity=0.198 Sum_probs=67.8
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+....++||+..++|+|+ ..|++||++|+++++.++. + .+.+++||++++|+|..|.+.|.+++++++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~g-----~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~ 169 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVDG-----E--RTPMNEGDFILTPQWRWHDHGNPGDEPVIW 169 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEETT-----E--EEECCTTCEEEECTTSCEEEECCSSSCEEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEECC-----E--EEEEcCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 3578999999999999999997 7899999999998844432 2 589999999999999999999999999999
Q ss_pred EEEec
Q 027345 173 FASLG 177 (224)
Q Consensus 173 ~~~~~ 177 (224)
+++.+
T Consensus 170 l~v~d 174 (354)
T 2d40_A 170 LDGLD 174 (354)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88764
No 72
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.17 E-value=9.7e-11 Score=89.65 Aligned_cols=73 Identities=19% Similarity=0.144 Sum_probs=61.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+++..++++||+..++| ...+|++||++|++++.+.+ + .+.|++||+++||+|..|.+.|.+ ++++++
T Consensus 39 ~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~g------~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l 107 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTDG------E--TVTAGPGEIVYMPKGETVTIRSHE-EGALTA 107 (119)
T ss_dssp CCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEETT------E--EEEECTTCEEEECTTCEEEEEEEE-EEEEEE
T ss_pred CEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEECC------E--EEEECCCCEEEECCCCEEEEEcCC-CCeEEE
Confidence 578899999999876555 45899999999999998832 2 589999999999999999998875 677777
Q ss_pred EEec
Q 027345 174 ASLG 177 (224)
Q Consensus 174 ~~~~ 177 (224)
.+..
T Consensus 108 ~v~~ 111 (119)
T 3lwc_A 108 YVTY 111 (119)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 6654
No 73
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.16 E-value=7.5e-11 Score=100.29 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=65.2
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE-EcCCCeEEEEeCCCccEEEE
Q 027345 95 ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV-FPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~-~P~G~~H~~~N~G~~~a~~~ 173 (224)
..+.++.++||...++|||+ ..|++||++|++++.+.++ ...|++||.++ +|+|..|.++|.++++++++
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~~~--------~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l 104 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVGDV--------TRKMTALESAYIAPPHVPHGARNDTDQEVIAI 104 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEETTE--------EEEEETTTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEECCE--------EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEE
Confidence 36677789999999999998 8999999999999987432 58999999985 99999999999999999988
Q ss_pred EEec
Q 027345 174 ASLG 177 (224)
Q Consensus 174 ~~~~ 177 (224)
.+..
T Consensus 105 ~i~r 108 (243)
T 3h7j_A 105 DIKR 108 (243)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7753
No 74
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.16 E-value=2.7e-10 Score=102.14 Aligned_cols=80 Identities=19% Similarity=0.162 Sum_probs=64.1
Q ss_pred ceEEEEEEEcCCC-cCC--CccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 94 GISAVRIDYAPYG-QNP--PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 94 gis~~~v~l~pgg-~~p--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
.+.+. ..+.|++ ..+ +|||++..|++||++|++++.+.+.+ ++...+.|++||++++|+|.+|.++|.++++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~---g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~- 121 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN---ETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT- 121 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT---SCCEEEEEETTCEEEECTTEEEEEEECSTTE-
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC---CceEEEEECCCCEEEECCCCcEEEEeCCCCC-
Confidence 45666 4555655 455 89999889999999999999998733 3334789999999999999999999999876
Q ss_pred EEEEEecC
Q 027345 171 VAFASLGS 178 (224)
Q Consensus 171 ~~~~~~~s 178 (224)
++++++..
T Consensus 122 ~~l~v~~p 129 (350)
T 1juh_A 122 EMTGVIVP 129 (350)
T ss_dssp EEEEEEES
T ss_pred EEEEEEcC
Confidence 77777653
No 75
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.15 E-value=2.2e-10 Score=103.01 Aligned_cols=90 Identities=17% Similarity=0.058 Sum_probs=73.4
Q ss_pred CCceEEEeccc-CCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 75 LGFSVTNANVE-QIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 75 ~g~~v~~~~~~-~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
.|+.+..++.. ..+.+.+++ +....++||+..++|||+ .+|+.||++|++++.+.+ + ++.+++||+++
T Consensus 249 ~G~~~~~~np~t~~~~~~ti~--~~~~~l~pG~~~~~H~h~-~~ev~~v~~G~g~~~v~~------~--~~~~~~GD~~~ 317 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSMG--AFLQLLPKGFASRVARTT-DSTIYHVVEGSGQVIIGN------E--TFSFSAKDIFV 317 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSCE--EEEEEECTTCBCCCBEES-SCEEEEEEEEEEEEEETT------E--EEEEETTCEEE
T ss_pred CCeEEEEeCCCcCCCCCCcce--eEEEEECCCCCCCceecC-CcEEEEEEeCeEEEEECC------E--EEEEcCCCEEE
Confidence 46677877744 567777654 445689999999999999 559999999999999832 2 69999999999
Q ss_pred EcCCCeEEEEeCCCccEEEEEEec
Q 027345 154 FPIGMIHFQFNIGKTNAVAFASLG 177 (224)
Q Consensus 154 ~P~G~~H~~~N~G~~~a~~~~~~~ 177 (224)
+|++..|.++|. ++++++++.+
T Consensus 318 vP~~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 318 VPTWHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp ECTTCCEEEEEE--EEEEEEEEES
T ss_pred ECCCCeEEEEeC--CCEEEEEEcC
Confidence 999999999993 7788887643
No 76
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.14 E-value=3.5e-10 Score=96.50 Aligned_cols=77 Identities=14% Similarity=0.155 Sum_probs=67.5
Q ss_pred ccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 92 TLGISAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
+..+.+.+++++||+..+. |.|. .+|.+||++|++.+.+.++ .+.|++||+++++++..|+++|.|++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~~~--------~~~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLEEN--------YYPVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEETTE--------EEEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEECCE--------EEEcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 5578999999999999987 5565 8899999999999987533 5899999999999999999999999999
Q ss_pred EEEEEec
Q 027345 171 VAFASLG 177 (224)
Q Consensus 171 ~~~~~~~ 177 (224)
+++..-+
T Consensus 233 ~yl~~kd 239 (246)
T 1sfn_A 233 KYLLYKD 239 (246)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8887543
No 77
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.14 E-value=1e-10 Score=101.74 Aligned_cols=77 Identities=19% Similarity=0.198 Sum_probs=67.7
Q ss_pred ccceEEEEEEEcCCCcC--CCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCcc
Q 027345 92 TLGISAVRIDYAPYGQN--PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN 169 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~--ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~ 169 (224)
+..+.+.+++++||+.. +.|.|. ..|++||++|++++.+.++ ++.|++||.+++|+|..|.++|.|+++
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g~--------~~~L~~GD~i~ip~~~~H~~~N~g~~~ 135 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQGQ--------VHAMQPGGYAFIPPGADYKVRNTTGQH 135 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESSC--------EEEECTTEEEEECTTCCEEEECCSSSC
T ss_pred CCcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECCE--------EEEECCCCEEEECCCCcEEEEECCCCC
Confidence 34689999999999876 667886 8999999999999998643 589999999999999999999999999
Q ss_pred EEEEEEec
Q 027345 170 AVAFASLG 177 (224)
Q Consensus 170 a~~~~~~~ 177 (224)
++++++..
T Consensus 136 ~~~l~v~~ 143 (278)
T 1sq4_A 136 TRFHWIRK 143 (278)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99888764
No 78
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.14 E-value=9e-11 Score=86.90 Aligned_cols=69 Identities=17% Similarity=0.204 Sum_probs=53.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
..++.+.||. .++|+|+...|++||++|++++.+.+. + .+.|++||++++|+|..|.+.|. +++.++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~~-----~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFADG-----G--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETTS-----C--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECCC-----c--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 4556677876 469999855999999999999987541 2 58999999999999999999995 45666543
No 79
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.12 E-value=1.6e-10 Score=99.20 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=66.3
Q ss_pred cceEEEEEEEcCCCcCCCccC-CCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTH-PRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~H-p~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
..+.+.+++++||+....|.| +..+|++||++|++++.+.++ ++.|++||.++||++..|.++|.++++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~--------~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~ 128 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGK--------TFALSEGGYLYCPPGSLMTFVNAQAEDSQ 128 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTE--------EEEEETTEEEEECTTCCCEEEECSSSCEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCE--------EEEECCCCEEEECCCCCEEEEeCCCCCEE
Confidence 357889999999997766554 456799999999999998533 58999999999999999999999999999
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
++++..
T Consensus 129 ~l~v~~ 134 (261)
T 1rc6_A 129 IFLYKR 134 (261)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998874
No 80
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.12 E-value=1.1e-10 Score=84.76 Aligned_cols=70 Identities=26% Similarity=0.483 Sum_probs=53.9
Q ss_pred CccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 91 NTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 91 ~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
++..+.+.++. +..++|+|+...|++||++|++++.+.++ .+.+++||++++|+|..|...|.+ ++
T Consensus 29 ~~~~~~~~~~~----~~~~~H~H~~~~e~~~v~~G~~~~~~~~~--------~~~l~~Gd~~~ip~~~~H~~~~~~--~~ 94 (102)
T 3d82_A 29 NDYQFKLVKVE----GEFVWHEHADTDEVFIVMEGTLQIAFRDQ--------NITLQAGEMYVIPKGVEHKPMAKE--EC 94 (102)
T ss_dssp TTEEEEEEEEE----EECCCBCCTTCCEEEEEEESEEEEECSSC--------EEEEETTEEEEECTTCCBEEEEEE--EE
T ss_pred CCCEEEEEEEC----CCCCceeCCCCcEEEEEEeCEEEEEECCE--------EEEEcCCCEEEECCCCeEeeEcCC--CC
Confidence 33344455443 45899999855999999999999887533 589999999999999999999974 44
Q ss_pred EEEE
Q 027345 171 VAFA 174 (224)
Q Consensus 171 ~~~~ 174 (224)
.++.
T Consensus 95 ~~l~ 98 (102)
T 3d82_A 95 KIMI 98 (102)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 81
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.11 E-value=3.7e-10 Score=99.14 Aligned_cols=75 Identities=21% Similarity=0.148 Sum_probs=62.9
Q ss_pred EEEEEEcC-CCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 97 AVRIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 97 ~~~v~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
...+.+.| |...++|||+++.|++||++|++++.+.++ ++.|++||++++|++..|+++|.++ ++.++++
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~~~--------~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v 289 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTDGQ--------EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGV 289 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEETTE--------EEEECTTCEEEECTTCCEEEEECSS-SEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEECCE--------EEEECCCCEEEECCCCeEEEEECCC-CeEEEEE
Confidence 34456666 567899999877999999999999988432 6899999999999999999999998 8998888
Q ss_pred ecCCC
Q 027345 176 LGSQF 180 (224)
Q Consensus 176 ~~s~~ 180 (224)
+....
T Consensus 290 ~~~~~ 294 (337)
T 1y3t_A 290 LVPGL 294 (337)
T ss_dssp EESST
T ss_pred EcCcc
Confidence 75443
No 82
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.10 E-value=3.9e-10 Score=85.01 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=59.0
Q ss_pred ccceEEEEEEEcCCCcCCC---ccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCc
Q 027345 92 TLGISAVRIDYAPYGQNPP---HTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKT 168 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~pp---H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~ 168 (224)
+.++.+.++. .+|...++ |.|+ ..|++||++|++++.+.++. . .+.|++||.++||+|..|.+.|.+++
T Consensus 28 ~~~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~~~~----~--~~~l~~Gd~i~ipa~~~H~~~n~~~~ 99 (112)
T 2opk_A 28 RKGLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECEGDT----A--PRVMRPGDWLHVPAHCRHRVAWTDGG 99 (112)
T ss_dssp ETTEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEETTCS----S--CEEECTTEEEEECTTCCEEEEEECSS
T ss_pred CCCEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEECCEE----E--EEEECCCCEEEECCCCcEEEEeCCCC
Confidence 3356677774 45655555 4454 89999999999999986431 0 17899999999999999999999976
Q ss_pred -cEEEEEEec
Q 027345 169 -NAVAFASLG 177 (224)
Q Consensus 169 -~a~~~~~~~ 177 (224)
++++++++.
T Consensus 100 ~~~~~l~v~~ 109 (112)
T 2opk_A 100 EPTVWLAVHC 109 (112)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 666676664
No 83
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.09 E-value=2e-10 Score=89.64 Aligned_cols=71 Identities=21% Similarity=0.086 Sum_probs=59.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+.+.++.++|| ..|||...+|++||++|++++.+.++ .+.|++||+++||+|..|.+.| +++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~g~--------~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l 122 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHEGE--------TMIAKAGDVMFIPKGSSIEFGT--PTSVRFL 122 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEETTE--------EEEEETTCEEEECTTCEEEEEE--EEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEECCE--------EEEECCCcEEEECCCCEEEEEe--CCCEEEE
Confidence 578889999999 46677668999999999999987532 5899999999999999999987 4678887
Q ss_pred EEec
Q 027345 174 ASLG 177 (224)
Q Consensus 174 ~~~~ 177 (224)
++..
T Consensus 123 ~v~~ 126 (133)
T 2pyt_A 123 YVAW 126 (133)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7764
No 84
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.08 E-value=3.7e-10 Score=95.12 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=62.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+.+.++.++||...++|+|+ ..|++||++|++++.+.++ .+.+++||.+++|+|.+|+++|. .+++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~g~--------~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~l 221 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVDGK--------PFIVKKGESAVLPANIPHAVEAE-TENFKML 221 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEETTE--------EEEEETTEEEEECTTSCEEEECC-SSCEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEECCE--------EEEECCCCEEEECCCCcEEEEeC-CCCEEEE
Confidence 578889999999999999998 7899999999999987533 58999999999999999999993 4556555
Q ss_pred EE
Q 027345 174 AS 175 (224)
Q Consensus 174 ~~ 175 (224)
.+
T Consensus 222 l~ 223 (227)
T 3rns_A 222 LI 223 (227)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 85
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.07 E-value=3e-10 Score=98.25 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=65.7
Q ss_pred cceEEEEEEEcCCCcCCCccC-CCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTH-PRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~H-p~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
..+.+.+++++||+....|.| +..+|++||++|++++.+.++ ++.|++||.++||++.+|.++|.++++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~--------~~~L~~GD~~~~~~~~~H~~~N~~~~~~~ 131 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE--------THELEAGGYAYFTPEMKMYLANAQEADTE 131 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC--------EEEEETTEEEEECTTSCCEEEESSSSCEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCE--------EEEECCCCEEEECCCCCEEEEeCCCCCEE
Confidence 467889999999997765544 456899999999999997543 58999999999999999999999999999
Q ss_pred EEEEe
Q 027345 172 AFASL 176 (224)
Q Consensus 172 ~~~~~ 176 (224)
++++.
T Consensus 132 ~l~v~ 136 (274)
T 1sef_A 132 VFLYK 136 (274)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98876
No 86
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.07 E-value=3.9e-10 Score=94.75 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=68.0
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
...+.+..+.++||...|.|.|+ .+|+.||++|++++.+.+.. .+.+++||++++|+|+.|.++ ++++|+.
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~g~-------~~~l~pGd~v~ipsgv~Ha~r-t~dePll 199 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRNAP-------DLMLEPGQTRFHPANAPHAMT-TLTDPIL 199 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETTSC-------CEEECTTCEEEECTTCCEEEE-CCSSCEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECCCC-------EEecCCCCEEEcCCCCceeEE-ECCccEE
Confidence 34689999999999999999998 89999999999999886332 589999999999999999998 5889998
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
++++..
T Consensus 200 alwvW~ 205 (217)
T 4b29_A 200 TLVLWR 205 (217)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887764
No 87
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.05 E-value=3.4e-10 Score=98.18 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=77.0
Q ss_pred CCCCCCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEE
Q 027345 53 KLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 53 ~~~~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 132 (224)
+-++.+|++.+.+ |+ -.|..++..-. |.+ +..+.+.+++++||+..+.|.|. ++|++||++|++++.+.
T Consensus 38 avI~~~~iv~s~l--Pg----~~~~~~~vL~s---P~~-G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l~ 106 (266)
T 4e2q_A 38 ALITPESHVYSPL--PD----WTNTLGAYLIT---PAT-GSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTNT 106 (266)
T ss_dssp EEECGGGCCCEEC--TT----SSSEEEEEEEC---GGG-TCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC-
T ss_pred EEECccceEEeeC--CC----CcCEEEEEEcC---CCC-CCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEEC
Confidence 3444567777655 22 22333443322 322 24688999999999998888775 89999999999999986
Q ss_pred -ecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe
Q 027345 133 -TSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL 176 (224)
Q Consensus 133 -~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~ 176 (224)
++ ++.|++||.+++|++..|.++|. ++++++++.
T Consensus 107 ~g~--------~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~ 141 (266)
T 4e2q_A 107 SSS--------SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFE 141 (266)
T ss_dssp -CC--------CEEECTTEEEEECTTCCCEEEES--SCEEEEEEE
T ss_pred CCc--------EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 44 48999999999999999999995 688888774
No 88
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.04 E-value=9.2e-10 Score=100.31 Aligned_cols=78 Identities=17% Similarity=0.089 Sum_probs=68.9
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEe-CCCccE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFN-IGKTNA 170 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N-~G~~~a 170 (224)
+..+.+....+.||+..++|.|. ..|+.||++|++.+..++. + +..+++||++++|+|..|.+.| .|++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v~G-----~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l 191 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIVDG-----H--KVELGANDFVLTPNGTWHEHGILESGTEC 191 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEETT-----E--EEEECTTCEEEECTTCCEEEEECTTCCCE
T ss_pred CCeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEECC-----E--EEEEcCCCEEEECcCCCEEEEcCCCCCCE
Confidence 44788999999999999999998 6799999999997644432 2 5899999999999999999999 999999
Q ss_pred EEEEEec
Q 027345 171 VAFASLG 177 (224)
Q Consensus 171 ~~~~~~~ 177 (224)
+++++++
T Consensus 192 ~~l~v~d 198 (394)
T 3bu7_A 192 IWQDGLD 198 (394)
T ss_dssp EEEEEEC
T ss_pred EEEEccc
Confidence 9999775
No 89
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.04 E-value=9.1e-10 Score=92.71 Aligned_cols=73 Identities=8% Similarity=-0.063 Sum_probs=64.5
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
+..+.++.++||...++|.|+ .+|++||++|++++.+.++ ++.|++||.+++|+|.+|.++|. ++++++
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~~~--------~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l 104 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIENN--------KKTISNGDFLEITANHNYSIEAR--DNLKLI 104 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEESSC--------EEEEETTEEEEECSSCCEEEEES--SSEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEECCE--------EEEECCCCEEEECCCCCEEEEEC--CCcEEE
Confidence 568899999999999999998 8999999999999998643 58999999999999999999986 467777
Q ss_pred EEec
Q 027345 174 ASLG 177 (224)
Q Consensus 174 ~~~~ 177 (224)
.++.
T Consensus 105 ~i~~ 108 (227)
T 3rns_A 105 EIGE 108 (227)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7643
No 90
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.04 E-value=4.9e-09 Score=90.88 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=66.8
Q ss_pred ccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 92 TLGISAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
...+.+.+++++||+..+. |.|. .+|.+||++|++.+.+.++ .+.+++||+++++++.+|+++|.|++++
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~~~--------~~~V~~GD~i~~~~~~~h~~~n~G~e~~ 253 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLGDN--------WYPVQAGDVIWMAPFVPQWYAALGKTRS 253 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEETTE--------EEEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEECCE--------EEEecCCCEEEECCCCcEEEEeCCCCCE
Confidence 4578999999999999996 7776 7899999999999987533 6899999999999999999999999999
Q ss_pred EEEEE
Q 027345 171 VAFAS 175 (224)
Q Consensus 171 ~~~~~ 175 (224)
+++.-
T Consensus 254 ~yl~y 258 (266)
T 4e2q_A 254 RYLLY 258 (266)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98853
No 91
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.03 E-value=5.7e-10 Score=100.80 Aligned_cols=78 Identities=19% Similarity=0.188 Sum_probs=68.1
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
-.+.+....+.||+..++|.|. .+|+.||++|++.+..++. + +..+++||++++|+|..|.+.|.|++++++
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vdG-----~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~ 172 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVNG-----D--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAW 172 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEETT-----E--EEEEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred CceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEECC-----E--EEEEeCCCEEEECCCCcEEeEeCCCCCeEE
Confidence 4688999999999999999998 7899999999995333332 2 689999999999999999999999999999
Q ss_pred EEEecC
Q 027345 173 FASLGS 178 (224)
Q Consensus 173 ~~~~~s 178 (224)
+++++.
T Consensus 173 l~v~D~ 178 (368)
T 3nw4_A 173 IDGLDI 178 (368)
T ss_dssp EEEECH
T ss_pred EEecch
Confidence 998763
No 92
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.03 E-value=1.3e-09 Score=94.74 Aligned_cols=82 Identities=16% Similarity=0.056 Sum_probs=70.7
Q ss_pred CCCCCccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC
Q 027345 87 IPGLNTLGISAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI 165 (224)
Q Consensus 87 ~P~l~~~gis~~~v~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 165 (224)
.|.-....+.+.+++++||+.++. |.|. .+|.+||++|++.+.+.++ .+.|++||+++++.+..|+++|.
T Consensus 183 ~p~~~~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~~~--------~~~v~~GD~~~~~~~~~h~~~n~ 253 (278)
T 1sq4_A 183 DMSDMRHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLNQD--------WVEVEAGDFMWLRAFCPQACYSG 253 (278)
T ss_dssp CTTCTTCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEETTE--------EEEEETTCEEEEEESCCEEEECC
T ss_pred cCCCcCCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEECCE--------EEEeCCCCEEEECCCCCEEEEcC
Confidence 343445689999999999999997 4554 7899999999999887533 69999999999999999999999
Q ss_pred CCccEEEEEEec
Q 027345 166 GKTNAVAFASLG 177 (224)
Q Consensus 166 G~~~a~~~~~~~ 177 (224)
|+++++++.+.+
T Consensus 254 g~~~~~yl~~~d 265 (278)
T 1sq4_A 254 GPGRFRYLLYKD 265 (278)
T ss_dssp SSSCEEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 999999998875
No 93
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.02 E-value=9.6e-10 Score=88.25 Aligned_cols=71 Identities=18% Similarity=0.135 Sum_probs=57.9
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEe--CEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLE--GTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~--G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
.+++.++++ ++..++|||+...|++||++ |++++.+.++ .+.+++||++++|+|..|.+.+ +++
T Consensus 46 p~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~idge--------~~~l~~GD~v~IPpg~~H~i~g----~l~ 111 (157)
T 4h7l_A 46 SVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELNGQ--------SYPLTKLLAISIPPLVRHRIVG----EAT 111 (157)
T ss_dssp SCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEETTE--------EEECCTTEEEEECTTCCEEEES----CEE
T ss_pred cEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEECCE--------EEEeCCCCEEEECCCCeEeeEC----CEE
Confidence 345565554 45679999987889999999 9999988533 5899999999999999999973 688
Q ss_pred EEEEecC
Q 027345 172 AFASLGS 178 (224)
Q Consensus 172 ~~~~~~s 178 (224)
+++++..
T Consensus 112 ~L~I~~P 118 (157)
T 4h7l_A 112 IINIVSP 118 (157)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 8888754
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.02 E-value=3.3e-09 Score=96.65 Aligned_cols=92 Identities=21% Similarity=0.202 Sum_probs=73.5
Q ss_pred CceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc
Q 027345 76 GFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 76 g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 155 (224)
|..+..++... .+-....+.+....++||+..++|.|. ..|++||++|++++.+.++ ++.+++||++++|
T Consensus 276 ~~~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~ge--------~~~~~~GD~~~iP 345 (394)
T 3bu7_A 276 GLILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVGGK--------RFDWSEHDIFCVP 345 (394)
T ss_dssp BEEEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEETTE--------EEEECTTCEEEEC
T ss_pred ceEEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEECCE--------EEEEeCCCEEEEC
Confidence 44455555443 221233577888899999999999998 7899999999998877432 6899999999999
Q ss_pred CCCeEEEEeCC-CccEEEEEEec
Q 027345 156 IGMIHFQFNIG-KTNAVAFASLG 177 (224)
Q Consensus 156 ~G~~H~~~N~G-~~~a~~~~~~~ 177 (224)
+|..|.+.|.| ++++.++++.+
T Consensus 346 ~g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 346 AWTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp TTCCEEEEECCSSCCEEEEEEES
T ss_pred CCCeEEeEeCCCCCCeEEEEeeC
Confidence 99999999999 79999888753
No 95
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.96 E-value=1.9e-09 Score=86.06 Aligned_cols=72 Identities=14% Similarity=-0.003 Sum_probs=58.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+++..++++ ++. .|||...+|+.||++|++++.+. ++ ++.|++||+++||+|..|.+.|. ++++++
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~------g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l 131 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIID------GR--KVSASSGELIFIPKGSKIQFSVP--DYARFI 131 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEET------TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEEC------CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEE
Confidence 4677777776 443 46676789999999999999973 22 68999999999999999999997 678888
Q ss_pred EEecC
Q 027345 174 ASLGS 178 (224)
Q Consensus 174 ~~~~s 178 (224)
++...
T Consensus 132 ~V~~P 136 (151)
T 4axo_A 132 YVTYP 136 (151)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 77653
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.94 E-value=1.1e-08 Score=84.55 Aligned_cols=84 Identities=23% Similarity=0.178 Sum_probs=67.2
Q ss_pred EEEEEEEcCCC----------cCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC
Q 027345 96 SAVRIDYAPYG----------QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI 165 (224)
Q Consensus 96 s~~~v~l~pgg----------~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 165 (224)
+...+.+.|+. ..++|+|+ ..|+.||++|++.+.+.+.+ ++.+...+++||++++|+|+.|++.+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~-~~Ei~yVleG~G~f~i~d~~---d~~~~i~v~~GDlIiIPaG~~H~f~~~ 150 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHL-DEEIRYILEGSGYFDVRDKE---DKWIRISMEKGDMITLPAGIYHRFTLD 150 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECS-SCEEEEEEEEEEEEEEECTT---SCEEEEEEETTEEEEECTTCCEEEEEC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECC-cceEEEEEeceEEEEECCCC---CeEEEEEECCCCEEEECcCCcCCcccC
Confidence 55556677775 24899998 69999999999999998753 455567999999999999999999987
Q ss_pred CCccEEEEEEecCCCCcee
Q 027345 166 GKTNAVAFASLGSQFPGVI 184 (224)
Q Consensus 166 G~~~a~~~~~~~s~~pg~~ 184 (224)
.+....++-+|. ..||..
T Consensus 151 ~~~~~~airlF~-~~~~W~ 168 (191)
T 1vr3_A 151 EKNYVKAMRLFV-GEPVWT 168 (191)
T ss_dssp TTCCEEEEEEES-SSCCCC
T ss_pred CCCCEEEEEEEC-CCCCcc
Confidence 777788887775 445554
No 97
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.85 E-value=4.8e-09 Score=78.02 Aligned_cols=62 Identities=19% Similarity=0.133 Sum_probs=49.7
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 99 RIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
...+.||.. ++| |+ ..|++||++|++++.+.+. + .+.|++||+++||+|.+|.+.|.++...
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~g-----~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTEDG-----K--KYVIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETTC-----C--EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECCC-----C--EEEECCCCEEEECCCCcEEEEeCCCeeE
Confidence 456778764 356 76 8999999999999988512 1 5899999999999999999999765443
No 98
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.82 E-value=1.4e-08 Score=83.93 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=61.1
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 95 ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
..+..+.++||+..|.|+|+ +.|+.||++|+.. ++. .++.+||.+++|.|..|...+.+++.+++++
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de~--------~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DET--------DRFGAGDIEIADQELEHTPVAERGLDCICLA 191 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CSS--------SEEETTCEEEECSSCCCCCEECSSSCEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CCc--------EEECCCeEEEeCcCCccCCEeCCCCCEEEEE
Confidence 45678899999999999997 8999999999965 442 5799999999999999999988788999888
Q ss_pred Eec
Q 027345 175 SLG 177 (224)
Q Consensus 175 ~~~ 177 (224)
+++
T Consensus 192 ~~d 194 (195)
T 2q1z_B 192 ATD 194 (195)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 99
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.79 E-value=1.3e-08 Score=86.81 Aligned_cols=71 Identities=17% Similarity=0.125 Sum_probs=61.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+.+++++||+....|+ .+|++||++|++++.+.++ ++.|++||.++||++..|.++|. +++++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~~~--------~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~ 114 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVGGE--------TRTLREYDYVYLPAGEKHMLTAK--TDARV 114 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECSSC--------EEEECTTEEEEECTTCCCEEEEE--EEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEECCE--------EEEECCCCEEEECCCCCEEEEeC--CCEEE
Confidence 35788999999999887774 7899999999999997543 58999999999999999999998 77877
Q ss_pred EEEe
Q 027345 173 FASL 176 (224)
Q Consensus 173 ~~~~ 176 (224)
+++.
T Consensus 115 l~v~ 118 (246)
T 1sfn_A 115 SVFE 118 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 100
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.78 E-value=1.9e-08 Score=80.81 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=62.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC--CCccEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI--GKTNAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~--G~~~a~ 171 (224)
+..+.+++++||+..++|.|+ +.|.+|||+|++.+. +. + ..+++||.++.|+|..|...+. +++.++
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~---e~---~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~ 109 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRYK---EH---D----WVAHAGSVVYETASTRHTPQSAYAEGPDII 109 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEET---TS---S----CCBCTTCEEEECSSEEECEEESSSSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEEe---CC---C----eEECCCeEEEECCCCcceeEeCCCCCCCEE
Confidence 567888999999999999998 789999999998752 32 2 4799999999999999999998 778898
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
++.+..
T Consensus 110 ~~~~~~ 115 (159)
T 3ebr_A 110 TFNIVA 115 (159)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 887554
No 101
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.73 E-value=1.7e-08 Score=77.72 Aligned_cols=67 Identities=15% Similarity=0.099 Sum_probs=54.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCcc
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN 169 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~ 169 (224)
.+++...+..||... .|+|. ..|++||++|++++.+.+ ++ ...|++||++++|+|..|.+.|.++..
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~~-----g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDPD-----GT--VHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECTT-----CC--EEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEECC-----Ce--EEEECCCCEEEECCCCeEEEEECCcee
Confidence 478888889998654 56664 489999999999988622 22 589999999999999999999986543
No 102
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.73 E-value=1e-07 Score=77.28 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=56.0
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG 166 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G 166 (224)
+..+.++. .-.|++...+|.|+ .+|++||++|++.+.+.+. ++.....|++||++++|+|+.|.-+..+
T Consensus 33 d~~~~V~~-v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~----g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 33 DSDFIVTV-VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD----GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SCSEEEEE-ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEET----TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CCcEEEEE-EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC----CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 33444443 34677889999887 9999999999999999875 4455799999999999999999886654
No 103
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.71 E-value=1.2e-08 Score=83.63 Aligned_cols=70 Identities=19% Similarity=0.197 Sum_probs=56.1
Q ss_pred CCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCce
Q 027345 108 NPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGV 183 (224)
Q Consensus 108 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~ 183 (224)
.++|+|+ ..|+.||++|++++.+. .+ ++.+...+++||++++|+|+.|++.+..+....++-+|... ||.
T Consensus 93 ~~~H~H~-~~Ei~~Vl~G~g~~~i~-~~---d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHG-EDEVRFFVEGAGLFCLH-IG---DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEES-SCEEEEEEESCCCCCEE-CS---SCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECC-hheEEEEEcceEEEEEE-eC---CEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 5899998 69999999999998875 22 45556789999999999999999887666667777667543 554
No 104
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.69 E-value=1.4e-07 Score=69.28 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=62.9
Q ss_pred eEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEE-ecCCCCceeecc---hhhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 027345 140 TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFAS-LGSQFPGVITIA---DTVFGADPPINPDFLGKAFQLDPNVVKD 215 (224)
Q Consensus 140 ~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~-~~s~~pg~~~~~---~~~f~~~p~~~~~vla~af~~~~~~v~~ 215 (224)
+.+...|++||+++||+|.+-.+.+.. ...+++. .+.+++....++ .+++. .+|.++++.+|+++.+++++
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~---~l~~evla~aF~~s~ee~~~ 78 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDLTFPGSGEEVEE 78 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT---TSCHHHHHHHSSSCTHHHHH
T ss_pred chhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH---hCCHHHHHHHcCCCHHHHHH
Confidence 345688999999999999999999874 4777776 355588888886 48888 49999999999999999999
Q ss_pred Hhhh
Q 027345 216 LQKK 219 (224)
Q Consensus 216 l~~~ 219 (224)
|+..
T Consensus 79 l~~~ 82 (93)
T 1dgw_Y 79 LLEN 82 (93)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9864
No 105
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.69 E-value=7e-08 Score=86.37 Aligned_cols=81 Identities=17% Similarity=0.155 Sum_probs=65.0
Q ss_pred CCCCccceEEEEEEEcC---CCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEe
Q 027345 88 PGLNTLGISAVRIDYAP---YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFN 164 (224)
Q Consensus 88 P~l~~~gis~~~v~l~p---gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N 164 (224)
+..+...+++.++++.+ |+..+.|.|+ .+|++||++|++++.+.+. + .+.|++||++++|+|.+|.+.|
T Consensus 242 ~~~~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~g~-----~--~~~l~~Gd~~~iPag~~h~~~~ 313 (350)
T 1juh_A 242 TQAQDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIGDY-----A--ATELGSGDVAFIPGGVEFKYYS 313 (350)
T ss_dssp HHHGGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEETTS-----C--CEEECTTCEEEECTTCCEEEEE
T ss_pred CcCceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEECCe-----E--EEEeCCCCEEEECCCCCEEEEe
Confidence 33344457888888888 4578889997 8999999999999998752 1 4899999999999999999999
Q ss_pred CCCccEEEEEEec
Q 027345 165 IGKTNAVAFASLG 177 (224)
Q Consensus 165 ~G~~~a~~~~~~~ 177 (224)
.++. ..++.+.+
T Consensus 314 ~~~~-~~~l~~~~ 325 (350)
T 1juh_A 314 EAYF-SKVLFVSS 325 (350)
T ss_dssp SSSS-EEEEEEEE
T ss_pred cCCe-EEEEEEec
Confidence 8665 66665554
No 106
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.69 E-value=1.1e-08 Score=80.58 Aligned_cols=77 Identities=10% Similarity=-0.078 Sum_probs=58.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEE-EEeCCCccEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHF-QFNIGKTNAVA 172 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~-~~N~G~~~a~~ 172 (224)
|-.+.+++++||+..++|+|+ ..|.+||++|+++....+.. ..+.+++||.+++|+|..|. ..+ .+.+++
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~-~~ee~~VL~G~~~~~~g~~~------~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~ 113 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHV-GPGEYFLTKGKMDVRGGKAA------GGDTAIAPGYGYESANARHDKTEF--PVASEF 113 (145)
T ss_dssp TEEEEEEEECTTEEECCEEES-SCEEEEEEEEEEEETTCGGG------TSEEEESSEEEEECTTCEESCCEE--EEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCC-CCEEEEEEEeEEEEcCCCEe------cceEeCCCEEEEECcCCccCCeEC--CCCeEE
Confidence 346788999999999999998 67779999999985422110 02789999999999999998 433 455777
Q ss_pred EEEecCC
Q 027345 173 FASLGSQ 179 (224)
Q Consensus 173 ~~~~~s~ 179 (224)
+.+++..
T Consensus 114 l~~~~gp 120 (145)
T 2o1q_A 114 YMSFLGP 120 (145)
T ss_dssp EEEEESC
T ss_pred EEEECCc
Confidence 7777544
No 107
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.66 E-value=6e-08 Score=78.36 Aligned_cols=74 Identities=22% Similarity=0.235 Sum_probs=59.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC--CccEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG--KTNAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G--~~~a~ 171 (224)
+..+.+++++||+..|+|+|+ ..|.+|||+|++... +. . .+.+++||.++.|+|..|...+.. +++++
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~~---~---~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci 111 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---EY---P---GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTE 111 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---TC---T---TSCEETTEEEEECTTCEECEECCTTCSSCEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---CC---c---eEEECCCeEEEeCCCCceeeEeCCCCCCCcE
Confidence 467888999999999999998 799999999999852 21 0 157899999999999999998865 33776
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
.+.+..
T Consensus 112 ~l~v~~ 117 (165)
T 3cjx_A 112 VIFMLS 117 (165)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 666544
No 108
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.64 E-value=7.6e-08 Score=78.45 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=63.1
Q ss_pred eEEEEEEEcCCCcCCCccCCC------CcEEEEEEeCEEEEEEEecCCCC-------C------eEEEEEEcCCCEEEEc
Q 027345 95 ISAVRIDYAPYGQNPPHTHPR------ATEILVVLEGTLYVGFVTSNQLN-------N------TLIAKVLNKGDVFVFP 155 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~------a~Ei~yVl~G~~~~~~~~~~~~~-------~------~~~~~~L~~GDv~~~P 155 (224)
...-++.+.||...|.|.|+. -.|-++|+.|.+++.+.++.-.. + .-....|+|||.+.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 667788999999999999998 88999999999998874321000 0 0024699999999999
Q ss_pred CCCeEEEEeCCCccEEEEEEecCCC
Q 027345 156 IGMIHFQFNIGKTNAVAFASLGSQF 180 (224)
Q Consensus 156 ~G~~H~~~N~G~~~a~~~~~~~s~~ 180 (224)
+|..|+++| +.+. +++.-+++.+
T Consensus 133 pg~~H~f~a-geeg-vli~EvSt~~ 155 (175)
T 2y0o_A 133 PNTKHWFQA-GEEG-AVVTEMSSTS 155 (175)
T ss_dssp TTCCEEEEE-EEEE-EEEEEEEECC
T ss_pred CCCcEEEEe-CCCC-EEEEEEeCCC
Confidence 999999999 3333 5555565543
No 109
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.61 E-value=9.6e-07 Score=71.69 Aligned_cols=86 Identities=19% Similarity=0.283 Sum_probs=72.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCC---eEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNN---TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~---~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
++++..+...||...++|-|..+..++.|++|+++..+....+ + ......+.+||++++|++.+|.+.|.+++++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~--~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~a 145 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTG--EHAELSNSYFVHEGECLISTKGLIHKMSNPTSERM 145 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECS--SSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCC--CceeecceEEeCCCcEEEeCCCCEEEEECCCCCCE
Confidence 5688999999999999999987788999999999877543221 2 1236789999999999999999999999999
Q ss_pred EEEEEecCCCC
Q 027345 171 VAFASLGSQFP 181 (224)
Q Consensus 171 ~~~~~~~s~~p 181 (224)
+-+-++..+..
T Consensus 146 VSlHvY~pp~~ 156 (171)
T 3eqe_A 146 VSLHVYSPPLE 156 (171)
T ss_dssp EEEEEEESCCC
T ss_pred EEEEEeCCCcc
Confidence 99998876654
No 110
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.54 E-value=4.2e-07 Score=80.27 Aligned_cols=85 Identities=21% Similarity=0.252 Sum_probs=66.6
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcC-C---CEEEEcCCCeEEEEeCCCccEE
Q 027345 96 SAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNK-G---DVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~-G---Dv~~~P~G~~H~~~N~G~~~a~ 171 (224)
........||....+|||.+..|.++|++|++.+.+.+... ++. ..+.. | +++++|+|..|.++|.|+++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~ 348 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVND--DEI--IEYYVSGDKLEVVDIPVGYTHNIENLGDTDMV 348 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTC--CCC--EEEEEETTBCCEEEECTTEEEEEEECSSSCEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCC--CcE--EEEEecCCcceEEEeCCCceEEeEEcCCCcEE
Confidence 34455689999999999999999999999999988765431 343 45555 7 9999999999999999999998
Q ss_pred EEEEe----cCCCCcee
Q 027345 172 AFASL----GSQFPGVI 184 (224)
Q Consensus 172 ~~~~~----~s~~pg~~ 184 (224)
++..- +.++|.++
T Consensus 349 ~~~~~~~~y~~~~~d~~ 365 (369)
T 3st7_A 349 TIMWVNEMFDPNQPDTY 365 (369)
T ss_dssp EEEEESSCCCSSSCCCE
T ss_pred EEEecCcccCCCCCccc
Confidence 87654 34455543
No 111
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.50 E-value=1.1e-06 Score=79.41 Aligned_cols=88 Identities=18% Similarity=0.119 Sum_probs=69.7
Q ss_pred Cce-EEEeccc-CCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 76 GFS-VTNANVE-QIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 76 g~~-v~~~~~~-~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
|.. +..++.. .-+.+.+ |.+....+.||...++|-|. .+++++|++|++++.+.++ ++..++||+|+
T Consensus 260 g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~~~--------~~~w~~gD~fv 328 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMNGE--------TTKLEKGDMFV 328 (368)
T ss_dssp TEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEETTE--------EEEECTTCEEE
T ss_pred ceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEECCE--------EEEecCCCEEE
Confidence 555 5666643 2334554 45556669999999999998 7899999999999988533 58999999999
Q ss_pred EcCCCeEEEEeCCCccEEEEEEe
Q 027345 154 FPIGMIHFQFNIGKTNAVAFASL 176 (224)
Q Consensus 154 ~P~G~~H~~~N~G~~~a~~~~~~ 176 (224)
+|++..|...|. +++.+|++-
T Consensus 329 vP~w~~h~~~n~--~~a~Lf~~~ 349 (368)
T 3nw4_A 329 VPSWVPWSLQAE--TQFDLFRFS 349 (368)
T ss_dssp ECTTCCEEEEES--SSEEEEEEE
T ss_pred ECCCCcEEEEeC--CCEEEEEEe
Confidence 999999999996 678777653
No 112
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.46 E-value=4.6e-07 Score=70.99 Aligned_cols=79 Identities=11% Similarity=0.163 Sum_probs=57.0
Q ss_pred EEEEEEEcC----CCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 96 SAVRIDYAP----YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 96 s~~~v~l~p----gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
.++...+.| +++..+|.|+..+|+++|++|++++.+.+......+.....|++|+++++|+|+.|...... .+.
T Consensus 26 ~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~--e~~ 103 (140)
T 3d0j_A 26 LVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQK--DTK 103 (140)
T ss_dssp EEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECT--TCE
T ss_pred EEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCC--ceE
Confidence 344444444 46778999999999999999999999874310001234689999999999999999887743 445
Q ss_pred EEEEe
Q 027345 172 AFASL 176 (224)
Q Consensus 172 ~~~~~ 176 (224)
++.+=
T Consensus 104 vLLiE 108 (140)
T 3d0j_A 104 MMYVQ 108 (140)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54443
No 113
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.43 E-value=1e-06 Score=71.46 Aligned_cols=62 Identities=19% Similarity=0.366 Sum_probs=50.4
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecC-CCCCeEEEEEEcCCCEEEEcCCCeEEEEeC
Q 027345 102 YAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN-QLNNTLIAKVLNKGDVFVFPIGMIHFQFNI 165 (224)
Q Consensus 102 l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 165 (224)
-.|+....+|.|+ .+|++|+++|++.+.+.+++ ++ .+.....|++||++++|+|+.|+-+..
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~g~~~-~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVDETDAE-PKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEECSSSS-CEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcCCCcc-cceeeEEECCCCEEEcCCCCCcCCccc
Confidence 3566778999666 89999999999999998741 00 145679999999999999999987654
No 114
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.42 E-value=1.3e-06 Score=73.76 Aligned_cols=73 Identities=22% Similarity=0.257 Sum_probs=60.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
+....+++++||...|+|+|+ ..|.+||++|++. ++. ..+.+||.++.|+|..|.... ++.++++
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~~--------~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~ 106 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DEH--------GDYPAGTYVRNPPTTSHVPGS--AEGCTIF 106 (223)
T ss_dssp CEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ETT--------EEEETTEEEEECTTCEECCEE--SSCEEEE
T ss_pred ccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----ECC--------eEECCCeEEEeCCCCccccEe--CCCCEEE
Confidence 456778899999999999998 7899999999976 332 589999999999999998775 5678888
Q ss_pred EEecCCCC
Q 027345 174 ASLGSQFP 181 (224)
Q Consensus 174 ~~~~s~~p 181 (224)
..+..-+|
T Consensus 107 vk~~~~~~ 114 (223)
T 3o14_A 107 VKLWQFDP 114 (223)
T ss_dssp EEESCSCT
T ss_pred EEecCCCC
Confidence 87754333
No 115
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.40 E-value=4e-06 Score=69.98 Aligned_cols=84 Identities=20% Similarity=0.263 Sum_probs=68.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeE---EEEEEcCCCEEEEcC--CCeEEEEeC-CC
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTL---IAKVLNKGDVFVFPI--GMIHFQFNI-GK 167 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~---~~~~L~~GDv~~~P~--G~~H~~~N~-G~ 167 (224)
.+.+..+...||...++|-|. ...+++|++|+++..+.....++..+ ...++.+||+++++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~-~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHT-VWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCC-cceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 478888999999999999998 59999999999987765421110111 157899999999999 999999999 78
Q ss_pred ccEEEEEEecC
Q 027345 168 TNAVAFASLGS 178 (224)
Q Consensus 168 ~~a~~~~~~~s 178 (224)
++++.+-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999888854
No 116
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.37 E-value=2.8e-06 Score=66.02 Aligned_cols=59 Identities=19% Similarity=0.125 Sum_probs=48.5
Q ss_pred CCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCC-ccEEEEEEe
Q 027345 109 PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGK-TNAVAFASL 176 (224)
Q Consensus 109 ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~-~~a~~~~~~ 176 (224)
.||.|+ .-|++||++|++++.+.+. .+.+++||++++|+|.+|...+.++ ++...+++.
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i~~~--------~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKNQGR--------EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEETTE--------EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEECCE--------EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEE
Confidence 489997 8899999999999987432 5899999999999999999888763 555555443
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.31 E-value=1e-06 Score=70.25 Aligned_cols=90 Identities=9% Similarity=-0.012 Sum_probs=64.4
Q ss_pred CCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEE
Q 027345 75 LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 154 (224)
.|...+.+... | ..|-...+++++||+..++|+|+ +.|.+|||+|++.....+.. ....+++|+.++-
T Consensus 31 ~Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~Gd~~------~~~~~~aGsYv~e 98 (153)
T 3bal_A 31 GGITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRGGEQE------GGSTAYAPSYGFE 98 (153)
T ss_dssp SCCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETTCGGG------TSEEEESSEEEEE
T ss_pred CCeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecCcccc------CccccCCCeEEEc
Confidence 46666666322 2 24788899999999999999999 78889999999986532211 1368899999999
Q ss_pred cCCCeEEEEeCCCccEEEEEEec
Q 027345 155 PIGMIHFQFNIGKTNAVAFASLG 177 (224)
Q Consensus 155 P~G~~H~~~N~G~~~a~~~~~~~ 177 (224)
|+|..|...-. ++..+++.+..
T Consensus 99 PpGs~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 99 SSGALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp CTTCEESCCEE-SSCEEEEEEEE
T ss_pred CCCCcccceeC-CCCeEEEEEEE
Confidence 99999974322 23344444443
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.22 E-value=4.5e-06 Score=72.30 Aligned_cols=73 Identities=18% Similarity=0.333 Sum_probs=56.2
Q ss_pred cCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCCCc
Q 027345 103 APYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPG 182 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg 182 (224)
.|+....+| |...+|++|+++|.+.+.+.++ ++.....|++||++++|+|+.|.-+... ..+.+.+=....+|
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~----g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gLviE~~R~~~ 111 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ----GKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGLVVERRRLET 111 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET----TEEEEEEECTTEEEEECTTCCEEEEECT--TCEEEEEEECCCTT
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC----CceeeEEECCCeEEEeCCCCCcCCcccC--CeEEEEEeecCCCC
Confidence 444558999 8889999999999999999875 5666899999999999999999987643 34444443333333
No 119
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.20 E-value=2.7e-05 Score=64.60 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=71.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCC-C---CeEEEEEEcCCCEEEE-cCCCeEEEEeCC-C
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL-N---NTLIAKVLNKGDVFVF-PIGMIHFQFNIG-K 167 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~---~~~~~~~L~~GDv~~~-P~G~~H~~~N~G-~ 167 (224)
.+++..+...||...++|-|..+..+++|++|+++-...+-.++ . ......++++||+.++ |.+.+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 46788899999999999999877899999999998876542110 0 1123689999999999 888899999999 7
Q ss_pred ccEEEEEEecCCCCc
Q 027345 168 TNAVAFASLGSQFPG 182 (224)
Q Consensus 168 ~~a~~~~~~~s~~pg 182 (224)
++++-+=++.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 888888788765543
No 120
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.98 E-value=5.4e-05 Score=64.43 Aligned_cols=72 Identities=21% Similarity=0.209 Sum_probs=55.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
++++..+.+ .|..... .+| .+|++||++|++++.. + ++ ..++++||+++||+|..|.+...+.. ..++
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~-~-----g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y 113 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTS-G-----TD--SVTLSTGESAVIGRGTQVRIDAQPES-LWAF 113 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEE-T-----TE--EEEEETTCEEEECTTCCEEEEECTTE-EEEE
T ss_pred CeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEEC-C-----Ce--EEEEcCCCEEEECCCCEEEEEecCCe-EEEE
Confidence 688888888 5554332 233 5899999999999986 2 22 58999999999999999999887655 4456
Q ss_pred EEec
Q 027345 174 ASLG 177 (224)
Q Consensus 174 ~~~~ 177 (224)
+++.
T Consensus 114 ~~~~ 117 (238)
T 3myx_A 114 CAST 117 (238)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 6676
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.95 E-value=4.9e-05 Score=59.70 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=57.1
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCC-EEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 100 IDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGD-VFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GD-v~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
.+.+||....+|.|.+..|++++++|++.+.+.+. ....++.|.+.. .+.+|+|+.|.+.+.+.. ++++..
T Consensus 40 ~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg----~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~-avllvl 111 (141)
T 2pa7_A 40 FDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG----NIIQEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMMVL 111 (141)
T ss_dssp ESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS----SCEEEEEECCTTEEEEECTTCEEEEECCCTT-CEEEEE
T ss_pred EecCCCCEECcCcCCCceEEEEEEccEEEEEEECC----cEEEEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEEEE
Confidence 34568889999999999999999999999998654 333466776655 599999999999999875 666643
No 122
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.87 E-value=0.00014 Score=59.00 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=61.4
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCC---CeEEEEEEc---CCCEEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 102 YAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN---NTLIAKVLN---KGDVFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 102 l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~---~~~~~~~L~---~GDv~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
..+|..+.+|+|....++++|++|++...+++-..++ ++.....|. ....+++|+|..|.+.+.++++++++..
T Consensus 60 s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 60 VLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp ECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 4788899999998889999999999999988753211 345678888 5679999999999999999877776654
Q ss_pred ec
Q 027345 176 LG 177 (224)
Q Consensus 176 ~~ 177 (224)
.+
T Consensus 140 ~s 141 (174)
T 3ejk_A 140 TD 141 (174)
T ss_dssp ES
T ss_pred CC
Confidence 43
No 123
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.79 E-value=0.00056 Score=57.10 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=67.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEE----EEEEcCCCEEEEcCC--CeEEEEeCC-
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI----AKVLNKGDVFVFPIG--MIHFQFNIG- 166 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~----~~~L~~GDv~~~P~G--~~H~~~N~G- 166 (224)
.+++..+...||...|+|=|. +.-++.|++|+++-.+..-.++ ++.. ...+.+||+.+|..+ .+|.+.|.+
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~-g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~ 149 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAG-GRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFS 149 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTT-SCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCC-CCcccccceEEecCCCEEEECCCCCCEEEEccCCC
Confidence 467888999999999999998 8999999999997766432111 2211 378999999999987 899999984
Q ss_pred CccEEEEEEecCCC
Q 027345 167 KTNAVAFASLGSQF 180 (224)
Q Consensus 167 ~~~a~~~~~~~s~~ 180 (224)
+++++-+=++....
T Consensus 150 d~~avSLHvYg~pl 163 (211)
T 3uss_A 150 DRTSISIHVYGANI 163 (211)
T ss_dssp SSCEEEEEEESSCG
T ss_pred CCCEEEEEEcCCCC
Confidence 78888887776443
No 124
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.68 E-value=0.00018 Score=54.71 Aligned_cols=63 Identities=14% Similarity=0.051 Sum_probs=46.9
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC
Q 027345 95 ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG 166 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G 166 (224)
.....-+..||... .+++. .+|++|||+|++++...+. . ...+++||+++||+|....+.-..
T Consensus 42 ~~~GvWe~tPG~~~-~~~~~-~~E~~~iLeG~~~lt~ddG-----~--~~~l~aGD~~~~P~G~~gtWev~e 104 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGRD-LEETFVVVEGEALYSQADA-----D--PVKIGPGSIVSIAKGVPSRLEILS 104 (116)
T ss_dssp CEEEEEEECSEEEE-ECCCS-EEEEEEEEECCEEEEETTC-----C--CEEECTTEEEEECTTCCEEEEECS
T ss_pred EEEEEEecCCceeE-CeeCC-CcEEEEEEEeEEEEEeCCC-----e--EEEECCCCEEEECCCCeEEEEEeE
Confidence 45555678888644 33342 4599999999999886432 2 489999999999999998886543
No 125
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.47 E-value=0.0006 Score=57.94 Aligned_cols=63 Identities=17% Similarity=0.250 Sum_probs=49.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI 165 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 165 (224)
.++....+..||...+.+++ ..|++|||+|++++.-. + ++ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~~--~~E~~~ILeG~v~lt~~--~---G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPHK--IHELMNLIEGRVVLSLE--N---GS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEECS--SCEEEEEEECCEEEEET--T---SC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcCC--CCEEEEEEEeEEEEEeC--C---CC--EEEECCCCEEEECCCCEEEEEEC
Confidence 47888888999885554433 68999999999998743 2 23 58999999999999998877665
No 126
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.45 E-value=0.00045 Score=58.37 Aligned_cols=73 Identities=5% Similarity=-0.063 Sum_probs=53.2
Q ss_pred ceEEEEEEEcCCC--cCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC--CCcc
Q 027345 94 GISAVRIDYAPYG--QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI--GKTN 169 (224)
Q Consensus 94 gis~~~v~l~pgg--~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~--G~~~ 169 (224)
++-+....+.... ..++|||. .-|++||++|++. .+.+.. . ..+.+++||++++|+|..|.+... ++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~~~---~--~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~ 78 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDKNC---L--VSYEINSSSIILLKKNSIQRFSLTSLSDEN 78 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEETTT---T--EEEEECTTEEEEECTTCEEEEEEEECCSSC
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECCcc---c--eeEEEcCCCEEEEcCCCceeeccccCCCcc
Confidence 4455556666655 35889997 8999999999999 765331 1 138999999999999999988765 3344
Q ss_pred EEEE
Q 027345 170 AVAF 173 (224)
Q Consensus 170 a~~~ 173 (224)
...+
T Consensus 79 ~~~~ 82 (276)
T 3gbg_A 79 INVS 82 (276)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4433
No 127
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.26 E-value=0.0066 Score=48.92 Aligned_cols=132 Identities=16% Similarity=0.114 Sum_probs=86.5
Q ss_pred CCCCceEEEecccCCC-CCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCE-EEEEEEecCCCCCeEEEEE----E
Q 027345 73 NRLGFSVTNANVEQIP-GLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGT-LYVGFVTSNQLNNTLIAKV----L 146 (224)
Q Consensus 73 ~~~g~~v~~~~~~~~P-~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~~~~----L 146 (224)
.+-|+..++.....-+ +-.....+....-+.+|....+|... ++|+.+...|. +++.+..++ ++..+.+ +
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~d---g~~~~~~LG~dv 101 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPE---GELTTAQLGLDL 101 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTT---SCEEEEEESSCT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCC---CCEEEEEeCCCc
Confidence 4567877777765411 11122356777778999988888875 99999999998 488887775 4444444 5
Q ss_pred cCCCE--EEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecchhhhcCCCCCCHHHHHhhcCCCHHHHHHHh
Q 027345 147 NKGDV--FVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 217 (224)
Q Consensus 147 ~~GDv--~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~~f~~~p~~~~~vla~af~~~~~~v~~l~ 217 (224)
.+|+. ++||+|..+..++.+.+.+.+-|+. .||+..-. |.. .+.+-|.+.|.--++.|++|.
T Consensus 102 ~~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 102 AAGERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDD---FEL---FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp TTTEESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGG---CCB---CBHHHHHHSCCTTHHHHTTSC
T ss_pred ccCceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCc---eEE---cCHHHHHhHCchhHHHHHHhh
Confidence 67898 9999999999999832555555544 35542211 221 345556666666666666654
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.19 E-value=0.00083 Score=56.41 Aligned_cols=78 Identities=17% Similarity=0.241 Sum_probs=59.3
Q ss_pred CCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEE
Q 027345 75 LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 154 (224)
.|..+....... +-.+..+.++||...++|.| .+.|+ +||+|++. ++. ..+.+|+.+..
T Consensus 133 ~Gv~~~~L~~~~-------~E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~~--------~~~~~GsWlR~ 191 (223)
T 3o14_A 133 EGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VND--------EVLGRNAWLRL 191 (223)
T ss_dssp TTEEEEEEEECS-------SCEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ETT--------EEECTTEEEEE
T ss_pred CCeEEEEEecCC-------CcEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----ECC--------ceECCCeEEEe
Confidence 455555555443 22445677899999999999 79997 99999976 332 58999999999
Q ss_pred cCCCeEEEEeCCCccEEEEE
Q 027345 155 PIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 155 P~G~~H~~~N~G~~~a~~~~ 174 (224)
|.|..|.... |++.+.++.
T Consensus 192 P~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 192 PEGEALSATA-GARGAKIWM 210 (223)
T ss_dssp CTTCCEEEEE-EEEEEEEEE
T ss_pred CCCCccCcEE-CCCCeEEEE
Confidence 9999998877 667777664
No 129
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.16 E-value=0.0026 Score=51.95 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=54.7
Q ss_pred cCCCcCCCccC--CCCcEEEEEEeCEEEEEEEecCCCC---CeEEEEEEcC--CCEEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 103 APYGQNPPHTH--PRATEILVVLEGTLYVGFVTSNQLN---NTLIAKVLNK--GDVFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 103 ~pgg~~ppH~H--p~a~Ei~yVl~G~~~~~~~~~~~~~---~~~~~~~L~~--GDv~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
.+|.++.+|+| ....++++|++|++.--+++-..++ ++.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 37889999999 6688999999999855555543211 2566778876 58999999999999999877 555443
No 130
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.12 E-value=0.0027 Score=54.42 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=54.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc--CCCeEEEEeCCC-ccEEEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP--IGMIHFQFNIGK-TNAVAF 173 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P--~G~~H~~~N~G~-~~a~~~ 173 (224)
+....+.||.-.++|-|.+-+.+.||++|+++-. |+.+ | ..++++||+-++- +|+.|.-.|..+ +++.++
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~G--n---~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~l 138 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEG--N---HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRM 138 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTS--C---EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCC--C---EEEECCCeEEEEECCCCeEEEEEECCCCceEEEE
Confidence 4456789998899999974444789999998865 4432 4 4799999999995 468999999754 566654
Q ss_pred EE
Q 027345 174 AS 175 (224)
Q Consensus 174 ~~ 175 (224)
-+
T Consensus 139 Ql 140 (256)
T 2vec_A 139 QL 140 (256)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 131
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=97.07 E-value=0.0036 Score=51.08 Aligned_cols=72 Identities=13% Similarity=0.056 Sum_probs=54.5
Q ss_pred cCCCcCCCccC--CCCcEEEEEEeCEEEEEEEecCCCC---CeEEEEEEcC--CCEEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 103 APYGQNPPHTH--PRATEILVVLEGTLYVGFVTSNQLN---NTLIAKVLNK--GDVFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 103 ~pgg~~ppH~H--p~a~Ei~yVl~G~~~~~~~~~~~~~---~~~~~~~L~~--GDv~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
.+|.++.+|+| ....++++|++|++..-+++-..++ ++.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 37889999999 6678999999999854444432111 2566778876 58999999999999999877 555443
No 132
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.96 E-value=0.0058 Score=50.71 Aligned_cols=70 Identities=14% Similarity=0.196 Sum_probs=53.8
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeCEEEEEEEecCCCC---CeEEEEEEcC--CCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 103 APYGQNPPHTHP---RATEILVVLEGTLYVGFVTSNQLN---NTLIAKVLNK--GDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~~---~~~~~~~L~~--GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+|.++.+|+|. ...++++|++|++.--+++-..++ ++.....|.+ +..++||+|..|.+.+.++. ++++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEE
Confidence 578899999995 368999999999765555532211 3566788876 78999999999999999876 4443
No 133
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.90 E-value=0.0071 Score=53.68 Aligned_cols=74 Identities=18% Similarity=0.138 Sum_probs=55.0
Q ss_pred EEEcC-CCcCCCccCCCCcEEEEEEeCEEEEEEE-ecCCC------------------------------CCeEEEEEEc
Q 027345 100 IDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFV-TSNQL------------------------------NNTLIAKVLN 147 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~-~~~~~------------------------------~~~~~~~~L~ 147 (224)
+.+.| |+..++|+.+ ..-++..++|+=++.+. .+... .......+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 45666 7789999987 67788888999888877 32200 0123578999
Q ss_pred CCCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 148 KGDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 148 ~GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
+||++++|+|..|+.++.++++..-++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvs 250 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNIT 250 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEE
Confidence 999999999999999998655555454
No 134
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.87 E-value=0.0064 Score=51.41 Aligned_cols=84 Identities=19% Similarity=0.182 Sum_probs=58.2
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEeC-EE--EEEEEecCCC----------CCeEE------EEEEcCCCEEEEc
Q 027345 95 ISAVRIDYAPYGQNPPHTHPRATEILVVLEG-TL--YVGFVTSNQL----------NNTLI------AKVLNKGDVFVFP 155 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G-~~--~~~~~~~~~~----------~~~~~------~~~L~~GDv~~~P 155 (224)
..--.+.+.||...|.|.|+.-.|-+++.-| .+ ++...+++++ +++.+ ..+|+||+.+-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4555678899999999999999999999998 44 4443332210 11222 2489999999999
Q ss_pred CCCeEEEEeCCCccEEEEEEecC
Q 027345 156 IGMIHFQFNIGKTNAVAFASLGS 178 (224)
Q Consensus 156 ~G~~H~~~N~G~~~a~~~~~~~s 178 (224)
+|+.|+++..+..--+++.-+++
T Consensus 186 Pg~~H~F~ae~g~G~vligEVSt 208 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLVGEVSS 208 (246)
T ss_dssp TTEEEEEEECTTSCCEEEEEEEE
T ss_pred CCCEEEEEecCCCccEEEEEccc
Confidence 99999999876522234444443
No 135
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.82 E-value=0.0068 Score=51.41 Aligned_cols=72 Identities=18% Similarity=0.156 Sum_probs=54.1
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEE--cCCCeEEEEeCCC-ccEEE
Q 027345 96 SAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF--PIGMIHFQFNIGK-TNAVA 172 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~--P~G~~H~~~N~G~-~~a~~ 172 (224)
.+....+.||.-.++|-|..-+.+.||++|+++-. |+.+ + ..++++||+-++ -+|+.|.-.|..+ +++.+
T Consensus 42 v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~G--n---~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~ 114 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMG--N---KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHL 114 (242)
T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSS--C---EEEEETTCEEEEECTTCEEEEEECCCSSCCEEE
T ss_pred eeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCC--C---cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Confidence 34456789998889999975555899999998765 4432 4 479999999999 4569999999753 56655
Q ss_pred EE
Q 027345 173 FA 174 (224)
Q Consensus 173 ~~ 174 (224)
+-
T Consensus 115 lQ 116 (242)
T 1tq5_A 115 YQ 116 (242)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 136
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.81 E-value=0.0034 Score=51.34 Aligned_cols=69 Identities=19% Similarity=0.482 Sum_probs=51.2
Q ss_pred EEEEEcCCC-cCCCccCCCCcEEEEEEeCEEEEEEEecCCC-------------------------------CCeEEEEE
Q 027345 98 VRIDYAPYG-QNPPHTHPRATEILVVLEGTLYVGFVTSNQL-------------------------------NNTLIAKV 145 (224)
Q Consensus 98 ~~v~l~pgg-~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-------------------------------~~~~~~~~ 145 (224)
..+-+.++| ..++|+.+ ..-+..+++|+=++.+..+... +.+.+..+
T Consensus 126 ~~~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 204 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCI 204 (235)
T ss_dssp EEEEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEE
T ss_pred eEEEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEE
Confidence 445566655 56778877 5678889999999888654210 01335779
Q ss_pred EcCCCEEEEcCCCeEEEEeCCC
Q 027345 146 LNKGDVFVFPIGMIHFQFNIGK 167 (224)
Q Consensus 146 L~~GDv~~~P~G~~H~~~N~G~ 167 (224)
|++||++++|+|..|..+|.+.
T Consensus 205 l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 205 LSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp ECTTCEEEECTTCEEEEEESSS
T ss_pred ECCCCEEEeCCCCcEEEEECCC
Confidence 9999999999999999999864
No 137
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.79 E-value=0.0088 Score=48.71 Aligned_cols=71 Identities=11% Similarity=0.056 Sum_probs=53.4
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeCEEEEEEEecCCCC---CeEEEEEEcC--CCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 103 APYGQNPPHTHP---RATEILVVLEGTLYVGFVTSNQLN---NTLIAKVLNK--GDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 103 ~pgg~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~~---~~~~~~~L~~--GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
.+|.++.+|+|. ...++++|++|++.--+++-..++ ++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 378899999995 578999999999854444432211 3456778876 58999999999999999877 44443
No 138
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.67 E-value=0.011 Score=45.35 Aligned_cols=71 Identities=20% Similarity=0.182 Sum_probs=53.7
Q ss_pred cCCCcCCCc----cCCCCcEEEEEEeCEEEEEEEecCCCCC-e-EEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe
Q 027345 103 APYGQNPPH----THPRATEILVVLEGTLYVGFVTSNQLNN-T-LIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL 176 (224)
Q Consensus 103 ~pgg~~ppH----~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~-~-~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~ 176 (224)
.|+++.+.| +|+...+.+.|++|++.+...++.+ + . .....+.+|+..++|++..|.++-..+ ++.+..-|
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g--~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leF 98 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEH--SAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDF 98 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTT--CSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCC--CcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEE
Confidence 466788999 5987779999999999988655532 3 1 235678999999999999999997655 55553333
No 139
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.66 E-value=0.0064 Score=50.12 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=55.0
Q ss_pred cCCCcCCCccCCCCcEEEEEEe-CEEEEEEEecCCCC---CeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe
Q 027345 103 APYGQNPPHTHPRATEILVVLE-GTLYVGFVTSNQLN---NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL 176 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~Ei~yVl~-G~~~~~~~~~~~~~---~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~ 176 (224)
.+|.++.+|.|+ ..++++|++ |++..-+++-. ++ ++.....|..+..++||+|..|.+.+.++. ++++...
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR-~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 142 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLR-EGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLV 142 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECB-SSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEE
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECC-CCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEEC
Confidence 678899999995 889999999 99755455432 11 355688999999999999999999999766 5544333
No 140
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.62 E-value=0.021 Score=47.03 Aligned_cols=70 Identities=16% Similarity=0.125 Sum_probs=52.8
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCEEEEEEEecCCC---CCeEEEEEEcC--CCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~---~~~~~~~~L~~--GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+|.++.+|+|.. ..++++|++|++..-+++-..+ -++.....|.+ +..++||+|..|.+.+.++. ++++
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 5788899999964 5899999999995555543211 13456788885 68999999999999999875 4443
No 141
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.38 E-value=0.018 Score=48.15 Aligned_cols=70 Identities=11% Similarity=-0.013 Sum_probs=52.5
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCEEEEEEEecCCC---CCeEEEEEEcCC--CEEEEcCCCeEEEEeCCCccEEEE
Q 027345 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNKG--DVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~---~~~~~~~~L~~G--Dv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+|-++-+|+|.. ..++++|++|++.--+++-..+ -++.....|.+. ..++||+|..|.+.+.++. ++++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~l 140 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLC 140 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEE
Confidence 4788999999964 5899999999975444443210 134567788775 7999999999999999877 4443
No 142
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.35 E-value=0.036 Score=45.84 Aligned_cols=71 Identities=8% Similarity=-0.003 Sum_probs=53.3
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCEEEEEEEecCCC---CCeEEEEEEcC--CCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~---~~~~~~~~L~~--GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
.+|-++.+|+|.. ..++++|++|++.--+++-..+ -++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788899999964 5899999999985555553211 13466788887 47999999999999999877 44443
No 143
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.33 E-value=0.017 Score=51.36 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=55.2
Q ss_pred EEEcCC-CcCCCccCCCCcEEEEEEeCEEEEEEEecCC------------------------C--------CCeEEEEEE
Q 027345 100 IDYAPY-GQNPPHTHPRATEILVVLEGTLYVGFVTSNQ------------------------L--------NNTLIAKVL 146 (224)
Q Consensus 100 v~l~pg-g~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~------------------------~--------~~~~~~~~L 146 (224)
+.+.+. ...++|+.+ ..-+..+++|+=++.+..+.. + ..+.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~-~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGE-QQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCS-EEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECC-hhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 556654 567999987 578888999998888765420 0 014578999
Q ss_pred cCCCEEEEcCCCeEEEEeCCC-ccEEEEEE
Q 027345 147 NKGDVFVFPIGMIHFQFNIGK-TNAVAFAS 175 (224)
Q Consensus 147 ~~GDv~~~P~G~~H~~~N~G~-~~a~~~~~ 175 (224)
++||++++|+|..|...|.++ ...+.+..
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 999999999999999999873 44444443
No 144
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.23 E-value=0.053 Score=45.48 Aligned_cols=70 Identities=9% Similarity=0.066 Sum_probs=52.6
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCEEEEEEEecCCC---CCeEEEEEEcCC--CEEEEcCCCeEEEEeCCCccEEEE
Q 027345 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNKG--DVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~---~~~~~~~~L~~G--Dv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+|-++.+|+|.. ..++++|++|++.--+++-..+ -++.....|.+. ..++||+|..|.+.+.++. ++++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vl 151 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVM 151 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEE
Confidence 5788899999964 5899999999985545543211 134567788774 7999999999999999877 4443
No 145
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.15 E-value=0.042 Score=45.34 Aligned_cols=71 Identities=7% Similarity=-0.026 Sum_probs=54.3
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeCEEEEEEEecCCC---CCeEEEEEEcC--CCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 103 APYGQNPPHTHP---RATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~---~~~~~~~~L~~--GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+|.++.+|+|. ....+++|++|++.--+++-..+ =++.....|.+ +..++||+|..|.+.+.++....++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEE
Confidence 578889999984 47899999999987666664321 13556777876 7799999999999999987644333
No 146
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.89 E-value=0.056 Score=49.63 Aligned_cols=68 Identities=24% Similarity=0.345 Sum_probs=50.0
Q ss_pred EEEEEcCCCc--CCCccCCCCcEEEEEEeCEEEEEEEecCC---C----------CCeEEEEEEcCCCEEEEcCCCeEEE
Q 027345 98 VRIDYAPYGQ--NPPHTHPRATEILVVLEGTLYVGFVTSNQ---L----------NNTLIAKVLNKGDVFVFPIGMIHFQ 162 (224)
Q Consensus 98 ~~v~l~pgg~--~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~---~----------~~~~~~~~L~~GDv~~~P~G~~H~~ 162 (224)
..+.+.|+|. .++|+-. ..-+++.++|+=++.+..+.. . +......+|++||++|+|+|..|+.
T Consensus 141 ~n~y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~ 219 (442)
T 2xdv_A 141 SNVYITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQA 219 (442)
T ss_dssp EEEEEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEE
T ss_pred cceEECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEE
Confidence 3345566664 3799986 677888889998888765531 0 0123578999999999999999999
Q ss_pred EeCC
Q 027345 163 FNIG 166 (224)
Q Consensus 163 ~N~G 166 (224)
++.+
T Consensus 220 ~s~~ 223 (442)
T 2xdv_A 220 DTPA 223 (442)
T ss_dssp ECCS
T ss_pred EecC
Confidence 9875
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.75 E-value=0.032 Score=49.19 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=53.1
Q ss_pred EEEEcC-CCcCCCccCCCCcEEEEEEeCEEEEEEEecCC-------------------C--------CCeEEEEEEcCCC
Q 027345 99 RIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ-------------------L--------NNTLIAKVLNKGD 150 (224)
Q Consensus 99 ~v~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~-------------------~--------~~~~~~~~L~~GD 150 (224)
.+.+.| |+..++|+.+ ..-+..+++|+=++.+..+.. + ..+.+..+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDV-MDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCS-SEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECC-cccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 344555 4567889987 567788899998888765420 0 0125689999999
Q ss_pred EEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 151 VFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 151 v~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
++++|+|..|...|.+. .+.+.+
T Consensus 249 ~LyiP~gWwH~v~~l~~--sisvn~ 271 (338)
T 3al5_A 249 VLFIPALWFHNVISEEF--GVGVNI 271 (338)
T ss_dssp EEEECTTCEEEEEESSC--EEEEEE
T ss_pred EEEECCCCeEEEeeCCC--EEEEEE
Confidence 99999999999999853 444443
No 148
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.68 E-value=0.084 Score=49.06 Aligned_cols=75 Identities=20% Similarity=0.327 Sum_probs=52.5
Q ss_pred EEEEEcCCCc--CCCccCCCCcEEEEEEeCEEEEEEEecCCC-----------------CCeEEEEEEcCCCEEEEcCCC
Q 027345 98 VRIDYAPYGQ--NPPHTHPRATEILVVLEGTLYVGFVTSNQL-----------------NNTLIAKVLNKGDVFVFPIGM 158 (224)
Q Consensus 98 ~~v~l~pgg~--~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-----------------~~~~~~~~L~~GDv~~~P~G~ 158 (224)
+.+.+.|+|. .++|+-+ ..-+++-++|+=+..+..+... +......+|++||++++|+|.
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~ 244 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGF 244 (489)
T ss_dssp EEEEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTC
T ss_pred ceEEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCC
Confidence 3455666664 5799887 5666667778777777654210 122357899999999999999
Q ss_pred eEEEEeCCCccEEEE
Q 027345 159 IHFQFNIGKTNAVAF 173 (224)
Q Consensus 159 ~H~~~N~G~~~a~~~ 173 (224)
.|+..+.+++...-+
T Consensus 245 ~H~~~s~~~~~Slhl 259 (489)
T 4diq_A 245 IHQAECQDGVHSLHL 259 (489)
T ss_dssp EEEEEBCSSCCEEEE
T ss_pred ceEEEecCCCceEEE
Confidence 999999876544333
No 149
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.62 E-value=0.012 Score=51.17 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=50.3
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEec-CCC-----CCeEEEEEEcCCCEEEEcCCCeEEEEeCCCc
Q 027345 95 ISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS-NQL-----NNTLIAKVLNKGDVFVFPIGMIHFQFNIGKT 168 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~-~~~-----~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~ 168 (224)
+.++|+.+.||+.+.||.=+ -|+....+|..++.+.-. +++ +++ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47888899999999999443 255545567766655432 211 133 57899999999999999999999987
Q ss_pred cEEEE
Q 027345 169 NAVAF 173 (224)
Q Consensus 169 ~a~~~ 173 (224)
+-+.+
T Consensus 167 ~RIhL 171 (290)
T 1e5r_A 167 SRQSL 171 (290)
T ss_dssp CCCEE
T ss_pred CeEEE
Confidence 64443
No 150
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.60 E-value=0.043 Score=47.07 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=59.8
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeE-EEEeCCCccE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIH-FQFNIGKTNA 170 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H-~~~N~G~~~a 170 (224)
+-|-|-.++.++|+-..|+-.|.-..| +||++|++.++ + ..|.+|...++|+|+.- .++-.|++++
T Consensus 88 d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G--------~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g~ 154 (303)
T 2qdr_A 88 DSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG--------E----WQLNKHSYSFIPAGVRIGSWKVLGGEEA 154 (303)
T ss_dssp TTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET--------T----EEECTTEEEEECTTCCBCCEEEETTSCE
T ss_pred CCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC--------C----EEecCCceEEecCCCccCceeecCCCCc
Confidence 347788999999999999988875667 99999999864 2 68999999999999865 4566788888
Q ss_pred EEEEEe
Q 027345 171 VAFASL 176 (224)
Q Consensus 171 ~~~~~~ 176 (224)
.++..-
T Consensus 155 ~iL~fe 160 (303)
T 2qdr_A 155 EILWME 160 (303)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888763
No 151
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.94 E-value=0.1 Score=46.18 Aligned_cols=71 Identities=17% Similarity=0.200 Sum_probs=51.5
Q ss_pred EEEcCC-CcCCCccCCCCc-EEEEEEeCEEEEEEEecCCC------------------------------------CCeE
Q 027345 100 IDYAPY-GQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL------------------------------------NNTL 141 (224)
Q Consensus 100 v~l~pg-g~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~------------------------------------~~~~ 141 (224)
+-+.+. ...+.|+++..+ -+..++.|+=++.+..+... ..+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 445554 467889988543 58889999888777654210 0123
Q ss_pred EEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 142 IAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 142 ~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
+..+|++||++++|+|..|+..|.++.-+
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~sis 284 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDTTIA 284 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCEEE
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCCeEE
Confidence 57899999999999999999999875433
No 152
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.90 E-value=0.37 Score=41.41 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=53.4
Q ss_pred ceEEEEEEEcCCCc---CCCccCCCC--c------EEEEE-E---eCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCC
Q 027345 94 GISAVRIDYAPYGQ---NPPHTHPRA--T------EILVV-L---EGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGM 158 (224)
Q Consensus 94 gis~~~v~l~pgg~---~ppH~Hp~a--~------Ei~yV-l---~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~ 158 (224)
.+-+..+ +.|||. -|||.|.+. . |+.|. + +|-+.-.+-.+++ .--.+..++-||++.+|+|.
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~--~~de~~~V~~~d~VlvP~Gy 228 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDR--SLDECMAVYNRDVVXVPXGY 228 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTS--SSEEEEEEETTCEEEESSSB
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCC--CCceEEEEECCCEEecCCCc
Confidence 4666666 778885 499999864 4 88865 3 3555444423221 11126899999999999999
Q ss_pred eEEEEeCCCccEEEEEEecC
Q 027345 159 IHFQFNIGKTNAVAFASLGS 178 (224)
Q Consensus 159 ~H~~~N~G~~~a~~~~~~~s 178 (224)
|-.-........++.+...
T Consensus 229 -Hp~~a~pGy~~YylwvMaG 247 (270)
T 2qjv_A 229 -HPVATIAGYDNYYLNVMAG 247 (270)
T ss_dssp -CCEEECTTCEEEEEEEEEC
T ss_pred -CCCcCCCCcccEEEEEEEC
Confidence 9865543445556666654
No 153
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.65 E-value=0.23 Score=42.63 Aligned_cols=79 Identities=23% Similarity=0.243 Sum_probs=57.6
Q ss_pred EEcCCCcCCCccCCCCcE-EEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcC--CCeEEEEeCCCccEEEEE--E
Q 027345 101 DYAPYGQNPPHTHPRATE-ILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPI--GMIHFQFNIGKTNAVAFA--S 175 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~E-i~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~--G~~H~~~N~G~~~a~~~~--~ 175 (224)
...|+.-.++|-|. ..| +.||++|+++-. |+.+ | ..++++||+-++-+ |+.|.-.|..++++..+- +
T Consensus 45 ~~~~~~gf~~HPHr-g~EtVTyvl~G~~~H~--DS~G--n---~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 116 (277)
T 2p17_A 45 DIFERGTFDVHPHR-GIETVTYVISGELEHF--DSKA--G---HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWV 116 (277)
T ss_dssp EEECTTCCCCEEEC-SEEEEEEEEESCEEEE--ETTT--E---EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEE
T ss_pred CCCCCCCCCCCCCC-CcEEEEEEEEeEEEEe--eCCC--C---ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEe
Confidence 56788889999997 566 789999998755 4442 3 47999999999887 578999998766666533 3
Q ss_pred -ecC----CCCceeecc
Q 027345 176 -LGS----QFPGVITIA 187 (224)
Q Consensus 176 -~~s----~~pg~~~~~ 187 (224)
+.. ..|..+.+.
T Consensus 117 nLP~~~k~~~P~y~~~~ 133 (277)
T 2p17_A 117 NLPSAYKMTEPRYQNLR 133 (277)
T ss_dssp ECCGGGTTCCCEEEEEC
T ss_pred eCChhhcCCCCcceeec
Confidence 332 236766654
No 154
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=94.56 E-value=0.088 Score=45.53 Aligned_cols=59 Identities=17% Similarity=0.043 Sum_probs=42.6
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccE
Q 027345 102 YAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNA 170 (224)
Q Consensus 102 l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a 170 (224)
+.+|.....-. ..+-++++++|+..+.+.+. ++.|++||++.||++..|.+.-..+..+
T Consensus 214 ~G~Ges~~~~~--~~d~wiWqLEGss~Vt~~~q--------~~~L~~~DsLLIpa~~~y~~~r~~gsv~ 272 (286)
T 2qnk_A 214 YGQGSSEGLRQ--NVDVWLWQLEGSSVVTMGGR--------RLSLAPDDSLLVLAGTSYAWERTQGSVA 272 (286)
T ss_dssp ECSEEEEECCC--SSCEEEEEEESCEEEEETTE--------EEEECTTEEEEECTTCCEEEEECTTCEE
T ss_pred EcCCccccccC--cCcEEEEEEcCceEEEECCe--------EEeccCCCEEEecCCCeEEEEecCCeEE
Confidence 66665422111 12678999999998887533 6999999999999999998876444433
No 155
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.55 E-value=0.073 Score=49.02 Aligned_cols=78 Identities=18% Similarity=0.066 Sum_probs=55.0
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCEEEEEEEecCCC----------------------CCeEEEEEEcCCCEEEEcCCCe
Q 027345 103 APYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPIGMI 159 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~----------------------~~~~~~~~L~~GDv~~~P~G~~ 159 (224)
.+|...+.|+.+.++ -+..+++|+=++.+.-+... ..+.+..++++||+++||.|..
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 445577999998654 46679999998888754310 0245678999999999999999
Q ss_pred EEEEeCCCccEEEEEEecCCC
Q 027345 160 HFQFNIGKTNAVAFASLGSQF 180 (224)
Q Consensus 160 H~~~N~G~~~a~~~~~~~s~~ 180 (224)
|...|..++-++-.-.+++.|
T Consensus 284 H~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 284 HAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEECSSCEEEEEEEECCSSS
T ss_pred EEEecCCCeEEEeeeeCCccc
Confidence 999998654333233334433
No 156
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.38 E-value=0.071 Score=49.58 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=49.8
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCEEEEEEEecCCC----------------------CCeEEEEEEcCCCEEEEcCCCe
Q 027345 103 APYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPIGMI 159 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~----------------------~~~~~~~~L~~GDv~~~P~G~~ 159 (224)
.+|...+.|.++.++ -+..+++|+=++.+.-+... ..+.+..++++||++++|+|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 445578999998555 35679999999888755210 1245678999999999999999
Q ss_pred EEEEeCCC
Q 027345 160 HFQFNIGK 167 (224)
Q Consensus 160 H~~~N~G~ 167 (224)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999744
No 157
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=94.38 E-value=0.12 Score=42.47 Aligned_cols=89 Identities=18% Similarity=0.214 Sum_probs=58.4
Q ss_pred ccCCCCCCccce-EEEEEEEcCCCcCCCccCCCCcEEEE----EEeC-EEEEEEEecCCCCCeEEEEEEcCCCEEEEcCC
Q 027345 84 VEQIPGLNTLGI-SAVRIDYAPYGQNPPHTHPRATEILV----VLEG-TLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIG 157 (224)
Q Consensus 84 ~~~~P~l~~~gi-s~~~v~l~pgg~~ppH~Hp~a~Ei~y----Vl~G-~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G 157 (224)
.+++|+++.... ++....+.||+.++||..+....+-+ ++-. ...+.+. ++ ++..++|++++|.-.
T Consensus 90 L~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~------~~--~~~w~eGe~~~fDds 161 (197)
T 3rcq_A 90 LEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCA------NE--TKTWEEGKVLIFDDS 161 (197)
T ss_dssp HTTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEET------TE--EECCCBTCEEEECTT
T ss_pred HHhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEEC------CE--EEEeeCCcEEEEcCC
Confidence 356665543222 45556799999999999985443322 2222 2333332 22 578999999999999
Q ss_pred CeEEEEeCCCccEEEEEEecCCCC
Q 027345 158 MIHFQFNIGKTNAVAFASLGSQFP 181 (224)
Q Consensus 158 ~~H~~~N~G~~~a~~~~~~~s~~p 181 (224)
..|...|.++++-+++ +++-..|
T Consensus 162 ~~Hev~N~~d~~RvvL-~~D~~rP 184 (197)
T 3rcq_A 162 FEHEVWQDASSFRLIF-IVDVWHP 184 (197)
T ss_dssp SCEEEEECSSSCEEEE-EEEEECT
T ss_pred eEEEEEECCCCCEEEE-EEeeeCC
Confidence 9999999998876555 4443333
No 158
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.35 E-value=0.16 Score=46.86 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=44.3
Q ss_pred CCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 108 NPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 108 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
...-...+++|++++-+|++.+. ++- + ...+++||+++||+|+.+.+.-.+ +++.++
T Consensus 170 ~~~f~NaDGD~Livpq~G~l~i~--TEf---G---~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi 226 (471)
T 1eyb_A 170 NRCFYNSDGDFLIVPQKGNLLIY--TEF---G---KMLVQPNEICVIQRGMRFSIDVFE--ETRGYI 226 (471)
T ss_dssp SEEEEESSEEEEEEEEESCEEEE--ETT---E---EEEECTTEEEEECTTCCEEEECSS--SEEEEE
T ss_pred cceeecCCCCEEEEEEeCCEEEE--Eec---c---cEEeccCCEEEECCccEEEEeeCC--CceEEE
Confidence 34456678999999999999876 343 3 378999999999999999987655 665544
No 159
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.04 E-value=0.36 Score=41.82 Aligned_cols=102 Identities=21% Similarity=0.236 Sum_probs=67.2
Q ss_pred CceEEEecccCCCCCCccc--eEEEEEEEcCCCcCCCccCCCCcE-EEEEE-eCEEEEEEEecCCCCCeEEEEEEcCCCE
Q 027345 76 GFSVTNANVEQIPGLNTLG--ISAVRIDYAPYGQNPPHTHPRATE-ILVVL-EGTLYVGFVTSNQLNNTLIAKVLNKGDV 151 (224)
Q Consensus 76 g~~v~~~~~~~~P~l~~~g--is~~~v~l~pgg~~ppH~Hp~a~E-i~yVl-~G~~~~~~~~~~~~~~~~~~~~L~~GDv 151 (224)
|..|+.+.. .|.+...| +-+....+.|+.-.++|-|. ..| +.||+ +|+++-. |+.+ + ..++++||+
T Consensus 21 G~~v~R~~~--~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHr-g~EtVTyvl~~G~~~H~--DS~G--n---~~~i~~Gdv 90 (290)
T 1j1l_A 21 GARVRRSIG--RPELKNLDPFLLFDEFKGGRPGGFPDHPHR-GFETVSYLLEGGSMAHE--DFCG--H---TGKMNPGDL 90 (290)
T ss_dssp TEEEEECTT--STTCCCCTTEEEEEEEEECTTCBEEEEEEB-SEEEEEEECSSSCEEEE--ETTS--C---EEEECTTCE
T ss_pred CeEEEEeCC--CccccccCcEEEEEccccCCCCCCCCCCCC-CeEEEEEECcceEEEEe--eCCC--C---ceEECCCcE
Confidence 445555543 33333333 24445568888778999996 666 78999 9999865 4442 4 478999999
Q ss_pred EEEcC--CCeEEEEeCCCccEEEEEE---ecC----CCCceeecc
Q 027345 152 FVFPI--GMIHFQFNIGKTNAVAFAS---LGS----QFPGVITIA 187 (224)
Q Consensus 152 ~~~P~--G~~H~~~N~G~~~a~~~~~---~~s----~~pg~~~~~ 187 (224)
-++-+ |+.|.-.|..++++..+-+ +.. ..|..+.+.
T Consensus 91 QwMtAG~GI~HsE~~~~~~~~~~lQlWvnLP~~~k~~~P~y~~~~ 135 (290)
T 1j1l_A 91 QWMTAGRGILHAEMPCSEEPAHGLQLWVNLRSSEKMVEPQYQELK 135 (290)
T ss_dssp EEEECTTCEEEEEEECSSSCEEEEEEEEECCGGGTTSCCEEEEEC
T ss_pred EEEeCCCCEEEEeEcCCCCCEEEEEEEecCChhhcCCCCcceecc
Confidence 98886 5789999986666665433 222 246666654
No 160
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.03 E-value=0.16 Score=46.73 Aligned_cols=66 Identities=15% Similarity=0.138 Sum_probs=50.1
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCEEEEEEEecCCC----------------------CCeEEEEEEcCCCEEEEcCCCe
Q 027345 103 APYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPIGMI 159 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~----------------------~~~~~~~~L~~GDv~~~P~G~~ 159 (224)
.+|...+.|..+.++ -+..|++|+=++.+.-+... ..+.+..++++||++++|+|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 345567899988655 35679999998888754310 1244678999999999999999
Q ss_pred EEEEeCCCc
Q 027345 160 HFQFNIGKT 168 (224)
Q Consensus 160 H~~~N~G~~ 168 (224)
|...|..+.
T Consensus 319 H~V~nleds 327 (447)
T 3kv4_A 319 HAVLTPVDC 327 (447)
T ss_dssp EEEEESSCE
T ss_pred EEEecCCCE
Confidence 999998554
No 161
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=93.61 E-value=0.12 Score=46.42 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=49.6
Q ss_pred cCCCcCCCccCCCCcE-EEEEEeCEEEEEEEecCCC----------------------CCeEEEEEEcCCCEEEEcCCCe
Q 027345 103 APYGQNPPHTHPRATE-ILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPIGMI 159 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~E-i~yVl~G~~~~~~~~~~~~----------------------~~~~~~~~L~~GDv~~~P~G~~ 159 (224)
.+|...+.|..+.++- +..+++|+=++.+.-+... ..+.+..++++||++++|+|..
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 4455789999986654 5679999998888754210 1245688999999999999999
Q ss_pred EEEEeCCC
Q 027345 160 HFQFNIGK 167 (224)
Q Consensus 160 H~~~N~G~ 167 (224)
|+..|..+
T Consensus 235 H~V~nled 242 (371)
T 3k3o_A 235 HAVLTPVD 242 (371)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999744
No 162
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=92.94 E-value=0.19 Score=45.49 Aligned_cols=68 Identities=16% Similarity=0.116 Sum_probs=51.0
Q ss_pred EEEcC-CCcCCCccCCCCcE-EEEEEeCEEEEEEEecCCC----------------------CCeEEEEEEcCCCEEEEc
Q 027345 100 IDYAP-YGQNPPHTHPRATE-ILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~E-i~yVl~G~~~~~~~~~~~~----------------------~~~~~~~~L~~GDv~~~P 155 (224)
+-+.| |...+.|+.+.++- +..+++|+=++.+..+... ..+.+..++++||++++|
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 34444 55778899986653 5679999998888755310 124567899999999999
Q ss_pred CCCeEEEEeCCC
Q 027345 156 IGMIHFQFNIGK 167 (224)
Q Consensus 156 ~G~~H~~~N~G~ 167 (224)
+|..|+..|..+
T Consensus 259 sGW~H~V~nled 270 (397)
T 3kv9_A 259 TGWIHAVLTSQD 270 (397)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEccCCcC
Confidence 999999999743
No 163
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=92.67 E-value=1.2 Score=38.43 Aligned_cols=82 Identities=17% Similarity=0.194 Sum_probs=54.3
Q ss_pred cceEEEEEEEcCCC---cCCCccCCCCcEEEEEEe----CEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC
Q 027345 93 LGISAVRIDYAPYG---QNPPHTHPRATEILVVLE----GTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI 165 (224)
Q Consensus 93 ~gis~~~v~l~pgg---~~ppH~Hp~a~Ei~yVl~----G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 165 (224)
-.+.+....+.||| .-|||.|.+..|..|--+ |.+ +.+..+. ++.+...++-||++++|...+|. ..
T Consensus 178 ~qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~p---~Etrhi~V~n~daVlvP~wh~h~--~~ 251 (282)
T 1xru_A 178 CQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACV-FHMMGQP---QETRHIVMHNEQAVISPSWSIHS--GV 251 (282)
T ss_dssp SSCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCE-EEEEEET---TEEEEEEECSSEEEEECTTCEEE--EE
T ss_pred hhEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEE-EEEeCCC---CCeeEEEEECCCEEEeCCCCCCC--CC
Confidence 34667777888988 369999987777766553 433 3333332 44445678999999999656666 34
Q ss_pred CCccEEEEEEecCCC
Q 027345 166 GKTNAVAFASLGSQF 180 (224)
Q Consensus 166 G~~~a~~~~~~~s~~ 180 (224)
|.+.-.++++...+|
T Consensus 252 G~~~Y~ylwvMAG~n 266 (282)
T 1xru_A 252 GTKAYTFIWGMVGEN 266 (282)
T ss_dssp ESSCCEEEEEEEESC
T ss_pred CccceEEEEEEEcCC
Confidence 666655666664443
No 164
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=92.53 E-value=0.24 Score=44.82 Aligned_cols=65 Identities=12% Similarity=0.133 Sum_probs=49.8
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCEEEEEEEecCCC----------------------CCeEEEEEEcCCCEEEEcCCCe
Q 027345 103 APYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPIGMI 159 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~----------------------~~~~~~~~L~~GDv~~~P~G~~ 159 (224)
..|.....|..+.++ -+..+++|+=++.+..+... ..+.+..++++||.+++|+|..
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 445678999988655 46679999998888754310 1244688999999999999999
Q ss_pred EEEEeCCC
Q 027345 160 HFQFNIGK 167 (224)
Q Consensus 160 H~~~N~G~ 167 (224)
|...|..+
T Consensus 262 H~V~nled 269 (392)
T 3pua_A 262 YATLTPVD 269 (392)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999744
No 165
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.05 E-value=0.55 Score=42.97 Aligned_cols=77 Identities=10% Similarity=0.141 Sum_probs=48.7
Q ss_pred ceEEEEEEEc--CCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC---CCc
Q 027345 94 GISAVRIDYA--PYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI---GKT 168 (224)
Q Consensus 94 gis~~~v~l~--pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~---G~~ 168 (224)
.+++.++++. ++.....-.+ .+..+++|++|++++...+. .+. ...|++||++++|++..-.+.+. +.+
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~~~~----~~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~~ 429 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQITGD----DST-KQKIDTGYVFFVAPGSSIELTADSANQDQ 429 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEETTC----GGG-CEEEETTCEEEECTTCCEEEEECSSCCSS
T ss_pred eEEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEeCCc----ccc-eEEeccCCEEEEeCCCcEEEEEecccCCC
Confidence 4678888887 3422211122 36799999999999875221 010 15899999999999944345554 245
Q ss_pred cEEEEEEe
Q 027345 169 NAVAFASL 176 (224)
Q Consensus 169 ~a~~~~~~ 176 (224)
.+.++.++
T Consensus 430 ~~~~~~a~ 437 (440)
T 1pmi_A 430 DFTTYRAF 437 (440)
T ss_dssp CCEEEEEE
T ss_pred cEEEEEEE
Confidence 56666555
No 166
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.05 E-value=0.4 Score=39.48 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=45.6
Q ss_pred EEEEEEEcCCCcCCCccCCCCc--EEEEEE----eCEEEEEEEecCC----------CC-----CeEEEEEEcCCCEEEE
Q 027345 96 SAVRIDYAPYGQNPPHTHPRAT--EILVVL----EGTLYVGFVTSNQ----------LN-----NTLIAKVLNKGDVFVF 154 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp~a~--Ei~yVl----~G~~~~~~~~~~~----------~~-----~~~~~~~L~~GDv~~~ 154 (224)
......+++|+...+|.|+++. =++|+- .|.+.+ .++.. .+ .......-++||+++|
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f--~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKL--EDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEE--ECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEE--eCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 4556678999999999998532 122332 234443 33310 00 1122456789999999
Q ss_pred cCCCeEEEEeC-CCccEEEE
Q 027345 155 PIGMIHFQFNI-GKTNAVAF 173 (224)
Q Consensus 155 P~G~~H~~~N~-G~~~a~~~ 173 (224)
|+-+.|...-. ++++-+-+
T Consensus 182 pS~l~H~V~p~~~~~~RiSI 201 (216)
T 2rg4_A 182 ESWLRHEVPMNMAEEDRISV 201 (216)
T ss_dssp ETTSCEEECCCCSSSCEEEE
T ss_pred CCCCEEeccCCCCCCCEEEE
Confidence 99999987643 33444333
No 167
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=91.24 E-value=0.91 Score=39.32 Aligned_cols=82 Identities=17% Similarity=0.177 Sum_probs=46.2
Q ss_pred cceEEEEEEEcCCCc---CCCccCCCCcEEEEEEe----CEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeC
Q 027345 93 LGISAVRIDYAPYGQ---NPPHTHPRATEILVVLE----GTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNI 165 (224)
Q Consensus 93 ~gis~~~v~l~pgg~---~ppH~Hp~a~Ei~yVl~----G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 165 (224)
-.+.+....+.|||. -|||.|.+..|..|--+ |.+ +.+.++. ++.+...++-||++++|+|-.|. ..
T Consensus 178 ~qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v-~h~~g~p---dEtrh~~V~n~daVlvP~wgyHp--~~ 251 (289)
T 1ywk_A 178 CQLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRI-FHMMGKP---DETKHLVMSNEQAAISPSWSIHS--GV 251 (289)
T ss_dssp SSCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCE-EEEESST---TSCEEEEECTTEEEEECTTSCCC--EE
T ss_pred heEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeE-EEECCCC---CceEEEEEECCCEEEeCCCcccC--CC
Confidence 346677778889873 59999997777766443 332 2333332 44445788999999999998886 24
Q ss_pred CCccEEEEEEecCCC
Q 027345 166 GKTNAVAFASLGSQF 180 (224)
Q Consensus 166 G~~~a~~~~~~~s~~ 180 (224)
|...-.++++...+|
T Consensus 252 Gt~~Y~ylwvMAG~n 266 (289)
T 1ywk_A 252 GTSNYSFIWAMCGEN 266 (289)
T ss_dssp ESSCCEEEEEEECC-
T ss_pred CCcCeEEEEEEEcCC
Confidence 444444666665443
No 168
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=90.81 E-value=0.3 Score=45.71 Aligned_cols=65 Identities=15% Similarity=0.199 Sum_probs=49.1
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCEEEEEEEecCCC----------------------CCeEEEEEEcCCCEEEEcCCCe
Q 027345 103 APYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPIGMI 159 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~----------------------~~~~~~~~L~~GDv~~~P~G~~ 159 (224)
..|....+|..+.++ -+..|++|+=++.+..+.+. ..+.+..++++||.+++|+|.+
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 445577889887655 56779999998888765310 1234578999999999999999
Q ss_pred EEEEeCCC
Q 027345 160 HFQFNIGK 167 (224)
Q Consensus 160 H~~~N~G~ 167 (224)
|...|..+
T Consensus 384 HaV~tleD 391 (528)
T 3pur_A 384 HAVLTPVD 391 (528)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999743
No 169
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=90.34 E-value=1.5 Score=31.61 Aligned_cols=63 Identities=16% Similarity=0.060 Sum_probs=45.3
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 102 YAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 102 l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
+.||. .+....+.|+.-|++|++++.+.+++ . ..++++||.|.+|++.--.++-. ++...+|.
T Consensus 30 m~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~----e--w~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 30 MLPGE---YTFGTQAPERMTVVKGALVVKRVGEA----D--WTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp ECSEE---EEEEESSCEEEEEEESEEEEEETTCS----S--CEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EeceE---EEEcCCCeEEEEEEEeEEEEEcCCCC----c--CEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 55654 23333478999999999999987653 2 58999999999999987766653 33444443
No 170
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=89.59 E-value=1.1 Score=39.00 Aligned_cols=57 Identities=25% Similarity=0.350 Sum_probs=40.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHF 161 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~ 161 (224)
-+++.++++.++... ....+..+++|++|++++.. . ++ ...|++||.+++|++...+
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~--~----~~--~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY--E----DK--TCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE--T----TE--EEEEETTCEEEECTTCCCE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE--C----CE--EEEEcCCcEEEEeCCCceE
Confidence 366777777644322 22247899999999999864 2 22 4789999999999987443
No 171
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=89.06 E-value=0.54 Score=42.38 Aligned_cols=57 Identities=16% Similarity=0.086 Sum_probs=40.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHF 161 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~ 161 (224)
-+++.++++.++... ..+. +.++++|++|++++... ++ +..|++||.+++|++...+
T Consensus 323 ~F~v~~~~l~~~~~~--~~~~-~~~il~v~~G~~~l~~~------~~--~~~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQH-SAAILFCVEGEAVLRKD------EQ--RLVLKPGESAFIGADESPV 379 (394)
T ss_dssp SCEEEEEECCSSCEE--ECCS-SCEEEEEEEEEEEEEET------TE--EEEECTTCEEEECGGGCCE
T ss_pred EEEEEEEEEcCCeEE--ecCC-CcEEEEEEeceEEEEEC------Ce--EEEEccCcEEEEeCCCceE
Confidence 467788888755321 2343 67999999999987642 22 4789999999999986433
No 172
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=88.52 E-value=2.6 Score=31.32 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=48.5
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe
Q 027345 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL 176 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~ 176 (224)
.+.||. .|.+....+.|+.-|++|++++.+.+++ . ...+++|+.|.+|++.--.++-. ++...+|.|
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~----e--W~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADST----E--SELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTCS----S--CEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCcc----c--CEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 356763 2344444578999999999999987653 2 68999999999999998777653 444455543
No 173
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=87.56 E-value=1.5 Score=31.86 Aligned_cols=52 Identities=13% Similarity=0.181 Sum_probs=37.7
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+++|..+-..--+ ...+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 29 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGDP-GDRLYVVTEGKVKLHRTSPDG--RENMLAVVGPSELI 80 (149)
T ss_dssp EEEEECTTCEEECTTSE-ECEEEEEEESCEEEEEECTTS--SEEEEEEECTTCEE
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEecEEEEEEECCCC--cEEEEEEcCCcCEe
Confidence 45678888765333222 578999999999998776652 45557889999987
No 174
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=86.61 E-value=5 Score=33.55 Aligned_cols=68 Identities=7% Similarity=-0.027 Sum_probs=47.1
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+..+.++||+....-..+.-.-++||++|++++. + ..|.+||.+++..+..-.+.+. +++.+
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~--------g----~~l~~gd~~~~~~~~~l~l~a~--~~a~~ 223 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN--------G----VKASTSDGLAIWDEQAISIHAD--SDSEV 223 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET--------T----EEEETTCEEEEESCSCEEEEES--SSEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC--------C----EEeCCCCEEEECCCCeEEEEeC--CCCEE
Confidence 36788889999998764333443356799999999862 2 3699999999987654445553 45555
Q ss_pred EE
Q 027345 173 FA 174 (224)
Q Consensus 173 ~~ 174 (224)
+.
T Consensus 224 Ll 225 (242)
T 1tq5_A 224 LL 225 (242)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 175
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=86.38 E-value=3.6 Score=30.89 Aligned_cols=65 Identities=17% Similarity=0.049 Sum_probs=42.4
Q ss_pred CcCCCccCCCC-cEEEEEEeCEEEEEEEecCCCCC-e-EEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 106 GQNPPHTHPRA-TEILVVLEGTLYVGFVTSNQLNN-T-LIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 106 g~~ppH~Hp~a-~Ei~yVl~G~~~~~~~~~~~~~~-~-~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
++...|.=..+ ..-+-|++|++.+...++++ . . .....+.+|+..++|+...|.+.-. +++.+..
T Consensus 27 ~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~--~~~~~~~~~~~~~~~~~i~Pq~wHrVe~s--dD~~f~l 94 (119)
T 3dl3_A 27 ALLTHHNTAVDVFGQICVMEGVVTYYGFANSE--ATEPEIKVVINAGQFATSPPQYWHRIELS--DDAQFNI 94 (119)
T ss_dssp HHHSSBCCCTTEEEEEEEEESEEEEEEESSTT--CCSCSEEEEEETTEEEEECTTCEEEEEEC--TTCEEEE
T ss_pred HHHhccCCCCcEEEEEEEEEeEEEEEEEcCCC--CCcccEEEEeCCCCCceeCCCceEEEEEC--CCeEEEE
Confidence 34444533322 24577999999988655431 1 1 1356889999999999999999933 3444433
No 176
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=86.32 E-value=0.81 Score=41.19 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=32.4
Q ss_pred CeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEecCCC
Q 027345 139 NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQF 180 (224)
Q Consensus 139 ~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~ 180 (224)
-+.++..-++||.++||+|.+|..+|..+.--+..-.++.++
T Consensus 290 v~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 290 VRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp CCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred CeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 355788899999999999999999999865555554454443
No 177
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=85.66 E-value=1.5 Score=31.71 Aligned_cols=54 Identities=11% Similarity=0.183 Sum_probs=33.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEE---EEEEcCCCEEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI---AKVLNKGDVFV 153 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~---~~~L~~GDv~~ 153 (224)
+....+++|..+-.--- ....+.+|++|.+.+...++++ ++.. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKENS-KADNLMLLLEGGVELFYSNGGA--GSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECC-----------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCCC-CCCcEEEEEeCEEEEEEECCCC--CceEeeeEEEecCCCEec
Confidence 34566788875432222 2678999999999987655542 3444 57789999883
No 178
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=85.65 E-value=3.3 Score=35.72 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=39.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCc-EEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEE
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQ 162 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~ 162 (224)
-+++.++++.+.... .. .+. .+++|++| +++.. . ++ ...|++||.+++|++...+.
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~--~----~~--~~~l~~G~~~~ipa~~~~~~ 285 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR--G----KE--TADLHRGYSCLVPASTDSFT 285 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE--S----SS--EEEECTTCEEEECTTCCEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe--C----Ce--EEEEccceEEEEeCCCceEE
Confidence 467777777643222 23 467 99999999 88765 2 22 46899999999999885543
No 179
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=85.41 E-value=3 Score=32.07 Aligned_cols=53 Identities=8% Similarity=-0.097 Sum_probs=38.0
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
....+++|..+-.---+ ...+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~G~~-~~~~y~i~~G~v~~~~~~~~G--~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKTGEI-CRINYFVVKGCLRLFFIDEKG--IEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTS--CEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECCCCe-eeEEEEeecCeEEEEEECCCC--CEEEEEEccCCcEEe
Confidence 35567787754322222 678999999999998876652 455567899999985
No 180
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=85.18 E-value=5.7 Score=33.52 Aligned_cols=71 Identities=13% Similarity=-0.061 Sum_probs=47.5
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEE
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+..+.++||+.......+.. -++||++|++++. +.+ + ....|.+||.+++..+..-.+.+. +++++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~---~--~~~~l~~gd~~~l~~~~~l~l~a~--~~a~~ 249 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THH---E--EKAALTCGDGAFIRDEANITLVAD--SPLRA 249 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETT---E--EEEEECTTCEEEEESCSEEEEEES--SSEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccc---c--cceEECCCCEEEECCCCeEEEEeC--CCCEE
Confidence 367888889999997644444433 7899999999874 321 1 135799999999976654444442 44554
Q ss_pred E
Q 027345 173 F 173 (224)
Q Consensus 173 ~ 173 (224)
+
T Consensus 250 L 250 (256)
T 2vec_A 250 L 250 (256)
T ss_dssp E
T ss_pred E
Confidence 4
No 181
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=85.03 E-value=3.1 Score=32.18 Aligned_cols=53 Identities=19% Similarity=0.307 Sum_probs=37.6
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
....+++|..+-.--- ....+.+|++|.+.+...++++ .+.....+.+||++=
T Consensus 14 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYAGD-RCETLFFIIKGSVTILIEDDDG--REMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECTTS--CEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcCCC-CCCeEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCCcc
Confidence 3456778776532222 2678999999999998876652 555678899999883
No 182
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=84.23 E-value=17 Score=30.21 Aligned_cols=135 Identities=13% Similarity=0.130 Sum_probs=79.5
Q ss_pred CCCCceEEEecccCCC------CCCccceEEEEEEEcCCCcCCCccC-CCCcEEEEEEeCE-EEEEEEecCCC-------
Q 027345 73 NRLGFSVTNANVEQIP------GLNTLGISAVRIDYAPYGQNPPHTH-PRATEILVVLEGT-LYVGFVTSNQL------- 137 (224)
Q Consensus 73 ~~~g~~v~~~~~~~~P------~l~~~gis~~~v~l~pgg~~ppH~H-p~a~Ei~yVl~G~-~~~~~~~~~~~------- 137 (224)
.+-|+..++.+.+... +-. ...+....-+.+|.. -||| -++.|+.+...|. +++.+..+++.
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~ 109 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAA 109 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC---
T ss_pred CCCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCCcccccccc
Confidence 3567777777665431 111 123455556777775 5555 3589999999998 57777765520
Q ss_pred -----------C-------CeEEEEEEc----CCC--EEEEcCCCeEEEEeCCCc-----cEEEEEEecCCCCceeecch
Q 027345 138 -----------N-------NTLIAKVLN----KGD--VFVFPIGMIHFQFNIGKT-----NAVAFASLGSQFPGVITIAD 188 (224)
Q Consensus 138 -----------~-------~~~~~~~L~----~GD--v~~~P~G~~H~~~N~G~~-----~a~~~~~~~s~~pg~~~~~~ 188 (224)
+ .+..+.+|. +|+ -++||+|.....+-.+++ .-.+++.. -.||+..-.
T Consensus 110 ~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCt--VaPGFdF~D- 186 (225)
T 3m3i_A 110 QPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCI--VSPGFDYRD- 186 (225)
T ss_dssp ---------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEE--EESCCCGGG-
T ss_pred cccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEE--EcCCccchh-
Confidence 0 044556663 466 679999998888766543 22333221 235543322
Q ss_pred hhhcCCCCCCHHHHHhhcCCCHHHHHHHhh
Q 027345 189 TVFGADPPINPDFLGKAFQLDPNVVKDLQK 218 (224)
Q Consensus 189 ~~f~~~p~~~~~vla~af~~~~~~v~~l~~ 218 (224)
|.. .+.+-|.+.|.--++.|++|-.
T Consensus 187 --Fel---~~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 187 --FEI---FTQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp --CEE---CBHHHHHHHCGGGHHHHHHHSB
T ss_pred --cEe---cCHHHHHHHCchHHHHHHHhch
Confidence 222 4556666677767777777754
No 183
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=83.99 E-value=3.1 Score=32.44 Aligned_cols=119 Identities=12% Similarity=0.019 Sum_probs=71.6
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc-----CCCeEEEEeCCCccEEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP-----IGMIHFQFNIGKTNAVA 172 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P-----~G~~H~~~N~G~~~a~~ 172 (224)
....+++|..+-..-.+ ...+.+|++|.+.+...++++ .+.....+.+||++=.. .-..+..... +++.+
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~--~~~~v 97 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGG--QERTLALLGPGELFGEMSLLDEGERSASAVAV--EDTEL 97 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSS--CEEEEEEECTTCEECHHHHHHCCBCSSEEEES--SSEEE
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCC--CEEEEEEecCCCEEeehhhcCCCCcceEEEEc--CCEEE
Confidence 44567888765333233 678999999999998876652 45567889999987321 1122334443 44555
Q ss_pred EEEec-------CCCCceee----------------------------cchhhh---cC----CCCCCHHHHHhhcCCCH
Q 027345 173 FASLG-------SQFPGVIT----------------------------IADTVF---GA----DPPINPDFLGKAFQLDP 210 (224)
Q Consensus 173 ~~~~~-------s~~pg~~~----------------------------~~~~~f---~~----~p~~~~~vla~af~~~~ 210 (224)
+.+-. .++|.... ++..+. .. ...++.+-+|...|+++
T Consensus 98 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 177 (216)
T 4ev0_A 98 LALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSR 177 (216)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCH
T ss_pred EEEcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCH
Confidence 44321 12332210 011111 00 11378999999999999
Q ss_pred HHHHHHhhhhc
Q 027345 211 NVVKDLQKKFI 221 (224)
Q Consensus 211 ~~v~~l~~~~~ 221 (224)
+++.++.+++.
T Consensus 178 ~tvsR~l~~l~ 188 (216)
T 4ev0_A 178 ETVSRVLHALA 188 (216)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888764
No 184
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=83.76 E-value=3.8 Score=31.77 Aligned_cols=119 Identities=16% Similarity=0.135 Sum_probs=71.3
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc----CC--CeEEEEeCCCccEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP----IG--MIHFQFNIGKTNAV 171 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P----~G--~~H~~~N~G~~~a~ 171 (224)
....+++|..+-..--+ ...+.+|++|.+.+...++++ .+.....+.+||++-.. .+ ..+..... +++.
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~ 94 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG--KEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACE 94 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTC--CEEEEEEEETTCEESCTTTTSTTCBCSSEEEES--SCEE
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCEeeeHHHhcCCCCceEEEEEC--CcEE
Confidence 34567777765333232 678999999999998876652 45556789999988322 11 22334443 4455
Q ss_pred EEEEec-------CCCCceee----------------------------cchhhh--cCC-----------CCCCHHHHH
Q 027345 172 AFASLG-------SQFPGVIT----------------------------IADTVF--GAD-----------PPINPDFLG 203 (224)
Q Consensus 172 ~~~~~~-------s~~pg~~~----------------------------~~~~~f--~~~-----------p~~~~~vla 203 (224)
++.+-. .++|.... ++..+. ... -+++.+-||
T Consensus 95 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA 174 (210)
T 3ryp_A 95 VAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIG 174 (210)
T ss_dssp EEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHH
T ss_pred EEEEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHH
Confidence 554311 13343210 001110 000 137889999
Q ss_pred hhcCCCHHHHHHHhhhhc
Q 027345 204 KAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 204 ~af~~~~~~v~~l~~~~~ 221 (224)
...|++.+++.++.+++.
T Consensus 175 ~~lg~sr~tvsR~l~~L~ 192 (210)
T 3ryp_A 175 QIVGCSRETVGRILKMLE 192 (210)
T ss_dssp HHHTCCHHHHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHHH
Confidence 999999999999888764
No 185
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=83.64 E-value=3.4 Score=32.85 Aligned_cols=52 Identities=21% Similarity=0.241 Sum_probs=37.9
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+++|..+-.--.+ ...+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTG--SEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTS--CEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC--CEEEEEEeCCCCEe
Confidence 45667888765333233 678999999999998876652 45567789999988
No 186
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=83.47 E-value=3.5 Score=32.60 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=38.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-..-.+ ...+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~ 81 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGG--RERVLGDIYAPGVV 81 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC----CEEEEEEEESSEEE
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCC--ceEEEEecCCCCEE
Confidence 345678888876444333 678999999999998876652 45567889999987
No 187
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=83.07 E-value=3.6 Score=32.41 Aligned_cols=53 Identities=15% Similarity=0.209 Sum_probs=38.5
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
....+++|..+-..--+ ...+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDD--RELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTS--CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC--CEEEEEEecCCCEEE
Confidence 45567888765333233 678999999999998877653 555677899999984
No 188
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=83.03 E-value=3.9 Score=32.23 Aligned_cols=116 Identities=11% Similarity=0.153 Sum_probs=71.1
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc-----CCCeEEEEeCCCccEEEE
Q 027345 99 RIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP-----IGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P-----~G~~H~~~N~G~~~a~~~ 173 (224)
...+++|..+-.---+ ...+.+|++|.+.+...++++ .+.....+.+||++=.. ....+..... +++.++
T Consensus 31 ~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~ 105 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEP-GDRLYIIISGKVKIGRRAPDG--RENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAV 105 (227)
T ss_dssp EEEECTTCEEECTTCC-CCEEEEEEESCEEEEEECTTS--CEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEE
T ss_pred EEEeCCCCEEEcCCCc-CCEEEEEEeeEEEEEEECCCC--cEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEE
Confidence 4567888765332222 678999999999998876652 45557789999987321 1223344443 445554
Q ss_pred EEe-------cCCCCceee----------------------------cchhh----------------hcCCCCCCHHHH
Q 027345 174 ASL-------GSQFPGVIT----------------------------IADTV----------------FGADPPINPDFL 202 (224)
Q Consensus 174 ~~~-------~s~~pg~~~----------------------------~~~~~----------------f~~~p~~~~~vl 202 (224)
.+- -.++|.... ++..+ +.. +++.+-|
T Consensus 106 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~--~~t~~~l 183 (227)
T 3d0s_A 106 SMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTH--DLTQEEI 183 (227)
T ss_dssp EEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEEC--CCCHHHH
T ss_pred EEeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcC--CCCHHHH
Confidence 432 123443210 00111 111 4789999
Q ss_pred HhhcCCCHHHHHHHhhhhc
Q 027345 203 GKAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 203 a~af~~~~~~v~~l~~~~~ 221 (224)
|...|++.+++.++.+++.
T Consensus 184 A~~lg~sr~tvsR~l~~l~ 202 (227)
T 3d0s_A 184 AQLVGASRETVNKALADFA 202 (227)
T ss_dssp HHHHTSCHHHHHHHHHHHH
T ss_pred HHHhCCcHHHHHHHHHHHH
Confidence 9999999999998887764
No 189
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=82.84 E-value=3.6 Score=31.89 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=38.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-.---+ ...+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~g--~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPNK--GIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETTT--EEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCCC--CeEEEEEccCCCee
Confidence 345667888765333233 678999999999998877652 44556789999987
No 190
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=82.53 E-value=4.5 Score=30.10 Aligned_cols=52 Identities=8% Similarity=-0.036 Sum_probs=36.0
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-.. ...+..+.+|++|.+.+.. ..++ .......+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g--~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDG--VGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETT--EEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCC--CeEEEEEcCCCCEe
Confidence 345677888765332 2236789999999999988 4431 44556789999966
No 191
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=81.94 E-value=3.2 Score=33.16 Aligned_cols=120 Identities=8% Similarity=0.019 Sum_probs=72.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEE----cCC--CeEEEEeCCCccE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF----PIG--MIHFQFNIGKTNA 170 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~----P~G--~~H~~~N~G~~~a 170 (224)
+....+++|..+-.--.+ ...+.+|++|.+.+...++++ .+.....+.+||++=. ... ..+..... +++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G--~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~ 117 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKEN--IYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEV 117 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGG--SCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCC--CEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cce
Confidence 456678888865433233 678999999999998776652 4555678999998732 121 23444444 344
Q ss_pred EEEEEec-------CCCCcee----------------------------ecchhhhc--CCC------CCCHHHHHhhcC
Q 027345 171 VAFASLG-------SQFPGVI----------------------------TIADTVFG--ADP------PINPDFLGKAFQ 207 (224)
Q Consensus 171 ~~~~~~~-------s~~pg~~----------------------------~~~~~~f~--~~p------~~~~~vla~af~ 207 (224)
.++.+-. .++|... .++..+.. ..+ .++.+-||...|
T Consensus 118 ~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG 197 (232)
T 1zyb_A 118 HTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLD 197 (232)
T ss_dssp EEEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHT
T ss_pred EEEEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhC
Confidence 4443311 1233210 01111111 011 378999999999
Q ss_pred CCHHHHHHHhhhhc
Q 027345 208 LDPNVVKDLQKKFI 221 (224)
Q Consensus 208 ~~~~~v~~l~~~~~ 221 (224)
++.+++.++.+++.
T Consensus 198 ~sr~tvsR~l~~l~ 211 (232)
T 1zyb_A 198 DTRLNISKTLNELQ 211 (232)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHH
Confidence 99999998888764
No 192
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=81.77 E-value=3.5 Score=31.91 Aligned_cols=50 Identities=16% Similarity=0.112 Sum_probs=34.2
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
.+++|..+-.--.+ ...+.+|++|.+.+...++++ .+.....+.+||++=
T Consensus 3 ~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 3 RFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPDG--RLITLRHVLPGDYFG 52 (195)
T ss_dssp EECTTCEEECTTSB-CCCEEEEEESCEEEEEECTTS--CEEEEEEECTTCEEC
T ss_pred EcCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC--CEEEEEEecCCCEec
Confidence 35566544222222 577999999999998776652 455577899999884
No 193
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=81.61 E-value=18 Score=28.72 Aligned_cols=129 Identities=13% Similarity=0.107 Sum_probs=78.2
Q ss_pred CCC-CceEEEecccCC-------CCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCE-EEEEEEecCCCCCeEEE
Q 027345 73 NRL-GFSVTNANVEQI-------PGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGT-LYVGFVTSNQLNNTLIA 143 (224)
Q Consensus 73 ~~~-g~~v~~~~~~~~-------P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~~ 143 (224)
.+- |+..++...... .+-.. ..+....-+.+|....+|.- +++|+.+-..|. +++.+..++ ++..+
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R~-~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~d---G~~~~ 98 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKRS-VLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPD---GSYSC 98 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCEE-SCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTT---SCEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCcc-cceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCC---CceEE
Confidence 355 777766665431 22221 24555566788775444444 489999999996 688888776 55556
Q ss_pred EEEc----CCC---EEEEcCCCeEEEEeCCCccEEEEEEecCCCCceeecchhhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 027345 144 KVLN----KGD---VFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDL 216 (224)
Q Consensus 144 ~~L~----~GD---v~~~P~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~~f~~~p~~~~~vla~af~~~~~~v~~l 216 (224)
.+|. +|+ -++||+|.....+. |+ -.+++. .-.||+..-. |.. .+.+-|.+.|.--++.|++|
T Consensus 99 ~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~~--~~LVsc--tVaPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~l 167 (172)
T 3loi_A 99 SILGNPLEHPEARHQVVVPRRVWFAQEV-DG--YCLASV--LVAPGFDFKD---FSL---GKREELIKEYPQHRDVIMRC 167 (172)
T ss_dssp EEESCTTTSTTCBSEEEECTTCEEEEEE-SS--EEEEEE--EEESCCCGGG---CEE---CCHHHHHHHCGGGHHHHHHT
T ss_pred EEeCCCcccCCcceEEEECCCEEEEEEe-CC--cEEEEE--EEcCCccchh---cEE---cCHHHHHHHCchHHHHHHHh
Confidence 6664 577 78999999887776 32 222221 1235543221 332 45566666776667777776
Q ss_pred h
Q 027345 217 Q 217 (224)
Q Consensus 217 ~ 217 (224)
.
T Consensus 168 t 168 (172)
T 3loi_A 168 T 168 (172)
T ss_dssp S
T ss_pred c
Confidence 4
No 194
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=81.39 E-value=1.4 Score=32.41 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=35.0
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-..-.+ ...+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG--QEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC-------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCC--CEEEEEEccCCCee
Confidence 345678888765433333 678999999999987655442 33345789999987
No 195
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=81.36 E-value=17 Score=28.34 Aligned_cols=90 Identities=12% Similarity=0.090 Sum_probs=59.2
Q ss_pred CCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCE-EEEEEEecCCCCCeEEEEEEc----
Q 027345 73 NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGT-LYVGFVTSNQLNNTLIAKVLN---- 147 (224)
Q Consensus 73 ~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~~~~L~---- 147 (224)
.+-|+..++...+...+-+. -.+....-+.+|....+|.=.+++|+.+-..|. +++.+..++ +...+.+|.
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~d---g~~~~~~LG~d~~ 94 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDG---REVQTFTLGPAIL 94 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSS---SCCEEEEESSCTT
T ss_pred CCCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCC---CcEEEEEeCCCcc
Confidence 45788888777665433222 234444556777655555432489999999998 777777665 444456664
Q ss_pred CCC--EEEEcCCCeEEEEeCC
Q 027345 148 KGD--VFVFPIGMIHFQFNIG 166 (224)
Q Consensus 148 ~GD--v~~~P~G~~H~~~N~G 166 (224)
+|+ -++||+|.....+..|
T Consensus 95 ~Ge~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 95 EGERPQVIVPANCWQSAESLG 115 (154)
T ss_dssp TTEESEEEECTTCEEEEEESS
T ss_pred cCcccEEEEcCCEEEEeeECC
Confidence 465 4899999999887664
No 196
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=80.92 E-value=3 Score=30.76 Aligned_cols=54 Identities=22% Similarity=0.183 Sum_probs=41.5
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEe
Q 027345 102 YAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFN 164 (224)
Q Consensus 102 l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N 164 (224)
+.||. .+....+.|+.-|++|.+++.+.+++ . ...+++|+.|.+|++.--.++-
T Consensus 43 m~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~~----e--W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 43 LHPGV---YTLSSEVAETIRVLSGMAYYHAEGAN----D--VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp ECSEE---EEECCSSCEEEEEEEEEEEEECTTCS----S--CEEEETTCEEEECSSSCEEEEE
T ss_pred EeeeE---EEecCCCcEEEEEEEeEEEEECCCCc----c--CEEECCCCEEEECCCCcEEEEE
Confidence 45653 34444578999999999999986653 2 6899999999999998776654
No 197
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=80.68 E-value=5.1 Score=32.72 Aligned_cols=119 Identities=16% Similarity=0.135 Sum_probs=71.8
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc----CC--CeEEEEeCCCccEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP----IG--MIHFQFNIGKTNAV 171 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P----~G--~~H~~~N~G~~~a~ 171 (224)
....+++|..+-.---+ ...+.+|++|.+.+...++++ .+.....+.+||++=.. .+ ........ +++.
T Consensus 70 ~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G--~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~--~~~~ 144 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG--KEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACE 144 (260)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTC--CEEEEEEEETTCEESCTTTTSTTCBCCSEEEES--SCEE
T ss_pred EEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCEEeehHHhCCCCCCceEEEEC--CCeE
Confidence 45678888865333223 678999999999998876652 55567889999988322 11 22334443 4455
Q ss_pred EEEEec-------CCCCceee----------------------------cchhhh--cCC-----------CCCCHHHHH
Q 027345 172 AFASLG-------SQFPGVIT----------------------------IADTVF--GAD-----------PPINPDFLG 203 (224)
Q Consensus 172 ~~~~~~-------s~~pg~~~----------------------------~~~~~f--~~~-----------p~~~~~vla 203 (224)
++.+-. .++|.... ++..+. ... -+++.+-||
T Consensus 145 l~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA 224 (260)
T 3kcc_A 145 VAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIG 224 (260)
T ss_dssp EEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHH
T ss_pred EEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHH
Confidence 544311 13343211 011110 000 037889999
Q ss_pred hhcCCCHHHHHHHhhhhc
Q 027345 204 KAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 204 ~af~~~~~~v~~l~~~~~ 221 (224)
...|++.+++.++.+++.
T Consensus 225 ~~lG~sr~tvsR~l~~L~ 242 (260)
T 3kcc_A 225 QIVGCSRETVGRILKMLE 242 (260)
T ss_dssp HHHTCCHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHH
Confidence 999999999999888765
No 198
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=80.11 E-value=10 Score=29.66 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=71.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEe
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASL 176 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~ 176 (224)
+....+++|..+-.--.+ ...+.+|++|.+.+. .++++ .+.....+.+||++- ....+..... +++.++.+-
T Consensus 23 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G--~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~ 94 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEE--REISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFAD 94 (222)
T ss_dssp CEEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETT--EEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEEC
T ss_pred CcEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCC--CEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEe
Confidence 345668888765333233 678999999999985 44442 445567899999887 3334445443 445555431
Q ss_pred c-------CCCCceeec----------------------------chhh------hcC--------CCCCCHHHHHhhcC
Q 027345 177 G-------SQFPGVITI----------------------------ADTV------FGA--------DPPINPDFLGKAFQ 207 (224)
Q Consensus 177 ~-------s~~pg~~~~----------------------------~~~~------f~~--------~p~~~~~vla~af~ 207 (224)
. .++|..... +..+ ++. ..+++.+-||..+|
T Consensus 95 ~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG 174 (222)
T 1ft9_A 95 IRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIG 174 (222)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHC
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhC
Confidence 1 133432100 1111 010 01378999999999
Q ss_pred CCHHHHHHHhhhhc
Q 027345 208 LDPNVVKDLQKKFI 221 (224)
Q Consensus 208 ~~~~~v~~l~~~~~ 221 (224)
++.+++.++.+++.
T Consensus 175 ~sr~tvsR~l~~L~ 188 (222)
T 1ft9_A 175 SSRQTTSTALNSLI 188 (222)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 99999998888764
No 199
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=79.84 E-value=5 Score=32.28 Aligned_cols=123 Identities=14% Similarity=0.137 Sum_probs=74.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc---CCCe----EEEEeCC
Q 027345 94 GISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP---IGMI----HFQFNIG 166 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P---~G~~----H~~~N~G 166 (224)
+..+....+++|..+-.---+ ...+.+|++|.+.+...++++ .+.....+.+||++-.. .+.. .....
T Consensus 40 ~~~~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G--~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A-- 114 (243)
T 3la7_A 40 AFPPVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAG--EEITVALLRENSVFGVLSLLTGNKSDRFYHAVA-- 114 (243)
T ss_dssp SCCCEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTC--CEEEEEEECTTCEESCHHHHSSCCSBCCEEEEE--
T ss_pred cchheeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCC--CEEEEEEecCCCEEcchHHhCCCCCcceEEEEE--
Confidence 334446778888866433233 678999999999998877653 55567889999987321 1111 23333
Q ss_pred CccEEEEEEec-------CCCCceee----------------------------cchhhh------c--------CCCCC
Q 027345 167 KTNAVAFASLG-------SQFPGVIT----------------------------IADTVF------G--------ADPPI 197 (224)
Q Consensus 167 ~~~a~~~~~~~-------s~~pg~~~----------------------------~~~~~f------~--------~~p~~ 197 (224)
.+++.++.+=. .++|.... ++..+. + -...+
T Consensus 115 ~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~l 194 (243)
T 3la7_A 115 FTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKL 194 (243)
T ss_dssp SSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEECSCC
T ss_pred ccceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEeccC
Confidence 34555554311 23443210 011110 0 01247
Q ss_pred CHHHHHhhcCCCHHHHHHHhhhhc
Q 027345 198 NPDFLGKAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 198 ~~~vla~af~~~~~~v~~l~~~~~ 221 (224)
+.+-||..+|++.+++.++.+++.
T Consensus 195 t~~~lA~~lG~sr~tvsR~l~~L~ 218 (243)
T 3la7_A 195 SHQAIAEAIGSTRVTVTRLLGDLR 218 (243)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCcHHHHHHHHHHHH
Confidence 899999999999999999888764
No 200
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=79.80 E-value=3 Score=33.03 Aligned_cols=120 Identities=11% Similarity=0.088 Sum_probs=69.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc-----CCCeEEEEeCCCccEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP-----IGMIHFQFNIGKTNAV 171 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P-----~G~~H~~~N~G~~~a~ 171 (224)
.....+++|..+-.--.+ ...+.+|++|.+.+...++++ .+.....+.+||++=.. ....+..... +++.
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g--~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~ 107 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYG--RFHISRIVKPGQFFGMRPYFAEETCSSTAIAV--ENSK 107 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC-------CCCEEEEECTTCEESHHHHHHTSCCSSEEEES--SCEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCC--CEEEEEEeCCCCEeeeehhhCCCCcceEEEEe--cceE
Confidence 345678888865333233 678999999999988765542 44557889999987221 1123344443 4444
Q ss_pred EEEEec-------CCCCcee----------------------------ecchhh------hc-------CCCCCCHHHHH
Q 027345 172 AFASLG-------SQFPGVI----------------------------TIADTV------FG-------ADPPINPDFLG 203 (224)
Q Consensus 172 ~~~~~~-------s~~pg~~----------------------------~~~~~~------f~-------~~p~~~~~vla 203 (224)
++.+-. .++|... .++..+ ++ -...++.+-||
T Consensus 108 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA 187 (232)
T 2gau_A 108 VLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELA 187 (232)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHH
T ss_pred EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHH
Confidence 443311 1233210 001111 11 01248999999
Q ss_pred hhcCCCHHHHHHHhhhhc
Q 027345 204 KAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 204 ~af~~~~~~v~~l~~~~~ 221 (224)
...|++.+++.++.+++.
T Consensus 188 ~~lg~sr~tvsR~l~~l~ 205 (232)
T 2gau_A 188 TLSNMTVSNAIRTLSTFV 205 (232)
T ss_dssp HHTTSCHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHH
Confidence 999999999999888764
No 201
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=79.73 E-value=1.3 Score=38.30 Aligned_cols=47 Identities=23% Similarity=0.289 Sum_probs=34.4
Q ss_pred cEEEEEEe-CEEEEEEEecCC--------CCCe------EEEEEEcCCCEEEEcCCCeEEEE
Q 027345 117 TEILVVLE-GTLYVGFVTSNQ--------LNNT------LIAKVLNKGDVFVFPIGMIHFQF 163 (224)
Q Consensus 117 ~Ei~yVl~-G~~~~~~~~~~~--------~~~~------~~~~~L~~GDv~~~P~G~~H~~~ 163 (224)
+|..|+++ .++..||-.... +.++ +....+++||.+++|+|.+|..-
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 79999998 556666543210 0133 66889999999999999999763
No 202
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=79.70 E-value=10 Score=32.53 Aligned_cols=78 Identities=12% Similarity=0.103 Sum_probs=49.4
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEE
Q 027345 92 TLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAV 171 (224)
Q Consensus 92 ~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~ 171 (224)
...+.+..+.++||+.......+...-++||++|++.+. +.. . ...+.++.++++..|-.-.+.+.+.+++.
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~~---~---~~~~~~~~~~~l~~gd~~~i~~~a~~~a~ 237 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PDD---A---QQKIEPHHTAVLGEGDSVQVENKDPKRSH 237 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CTT---S---CEEECTTEEEEECSCSEEEEECCSSSCEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Ccc---c---ceeccCceEEEecCCCEEEEEEcCCCCcE
Confidence 346888889999999764333333457899999999863 211 0 13466666666666655555554456677
Q ss_pred EEEEec
Q 027345 172 AFASLG 177 (224)
Q Consensus 172 ~~~~~~ 177 (224)
++.+-.
T Consensus 238 ~LLl~G 243 (290)
T 1j1l_A 238 FVLIAG 243 (290)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 665443
No 203
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=79.38 E-value=3.6 Score=32.38 Aligned_cols=53 Identities=23% Similarity=0.296 Sum_probs=38.1
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-..-.+ ...+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G--~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENG--KTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTS--CEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC--CEEEEEEecCCCEe
Confidence 345668888865433333 678999999999998776652 45556789999987
No 204
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=79.35 E-value=14 Score=28.82 Aligned_cols=116 Identities=15% Similarity=0.175 Sum_probs=71.2
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEEec
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLG 177 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~~~ 177 (224)
....+++|..+-.--.+ ...+.+|++|.+.+. .++++ .+.....+.+||++-.| ..+..... +++.++.+-.
T Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G--~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i~~ 99 (220)
T 2fmy_A 28 REQRYSKKAILYTPNTE-RNLVFLVKSGRVRVY-LAYED--KEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYTDI 99 (220)
T ss_dssp EEEEECTTCEEECTTCS-SCEEEEEEESEEEEE-EECSS--CEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEEEH
T ss_pred heeEeCCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCC--CEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEEeH
Confidence 45668888765332233 678999999999994 54442 55567889999988662 23344443 4455554321
Q ss_pred -------CCCCceeec----------------------------chhh------hc--------CCCCCCHHHHHhhcCC
Q 027345 178 -------SQFPGVITI----------------------------ADTV------FG--------ADPPINPDFLGKAFQL 208 (224)
Q Consensus 178 -------s~~pg~~~~----------------------------~~~~------f~--------~~p~~~~~vla~af~~ 208 (224)
.++|..... +..+ ++ -..+++.+-||...|+
T Consensus 100 ~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~ 179 (220)
T 2fmy_A 100 RNFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGT 179 (220)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTS
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCC
Confidence 134432100 0000 01 0114899999999999
Q ss_pred CHHHHHHHhhhhc
Q 027345 209 DPNVVKDLQKKFI 221 (224)
Q Consensus 209 ~~~~v~~l~~~~~ 221 (224)
+.+++.++.+++.
T Consensus 180 sr~tvsR~l~~l~ 192 (220)
T 2fmy_A 180 TRQTVSVLLNDFK 192 (220)
T ss_dssp CHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999999888764
No 205
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=78.99 E-value=5.5 Score=31.07 Aligned_cols=119 Identities=11% Similarity=0.058 Sum_probs=71.5
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEc-----CCC--eEEEEeCCCccE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP-----IGM--IHFQFNIGKTNA 170 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P-----~G~--~H~~~N~G~~~a 170 (224)
....+++|..+-..-.+ ...+.+|++|.+.+...++++ .+.....+.+||++.+. .+. .+..... +++
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~--~~~ 101 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEG--REITLYRLFDMDMCLLSASCIMRSIQFEVTIEAE--KDT 101 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTS--CEEEEEEECTTCEESGGGGGGCTTCCCCCEEEES--SCE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCC--CEEEEEecCCCCeeehhHHHHhCCCCCceEEEEe--eee
Confidence 35667888765333233 678999999999998877652 45556789999996321 222 2334433 455
Q ss_pred EEEEEec-------CCCCceeec----------------------------chh------hhcC-CCCCCHHHHHhhcCC
Q 027345 171 VAFASLG-------SQFPGVITI----------------------------ADT------VFGA-DPPINPDFLGKAFQL 208 (224)
Q Consensus 171 ~~~~~~~-------s~~pg~~~~----------------------------~~~------~f~~-~p~~~~~vla~af~~ 208 (224)
.++.+-. .++|..... +.. ..+. .-+++.+-||..+|+
T Consensus 102 ~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~ 181 (220)
T 3dv8_A 102 DLWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGS 181 (220)
T ss_dssp EEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTC
T ss_pred EEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCC
Confidence 5554321 123321100 000 0110 014889999999999
Q ss_pred CHHHHHHHhhhhc
Q 027345 209 DPNVVKDLQKKFI 221 (224)
Q Consensus 209 ~~~~v~~l~~~~~ 221 (224)
+++++.++.+++.
T Consensus 182 sr~tvsR~l~~L~ 194 (220)
T 3dv8_A 182 HREVITRMLRYFQ 194 (220)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999888764
No 206
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=78.97 E-value=8.7 Score=32.66 Aligned_cols=71 Identities=13% Similarity=0.060 Sum_probs=47.7
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcC-C----CeEEEEeCCC
Q 027345 93 LGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPI-G----MIHFQFNIGK 167 (224)
Q Consensus 93 ~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~-G----~~H~~~N~G~ 167 (224)
..+.+..+.++||+.......+...-++||++|++++. + + ...|.+||.+++.. | ..-.+.+.
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~--g-----~---~~~l~~~d~~~~~~~~~~~~~~l~l~a~-- 232 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG--A-----D---NIEGKAGQALFFSRHNRGEETELNVTAR-- 232 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET--T-----T---TEEEETTEEEEECCCCTTCEEEEEEEES--
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC--C-----C---ceEeCCCcEEEEcCCCCCccceEEEEeC--
Confidence 47888999999999764444333356899999998762 2 1 14699999999986 5 33334443
Q ss_pred ccEEEEEE
Q 027345 168 TNAVAFAS 175 (224)
Q Consensus 168 ~~a~~~~~ 175 (224)
+++.++.+
T Consensus 233 ~~a~~Ll~ 240 (277)
T 2p17_A 233 EKLRLLLY 240 (277)
T ss_dssp SSEEEEEE
T ss_pred CCcEEEEE
Confidence 34555543
No 207
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=78.53 E-value=4.5 Score=31.34 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=68.3
Q ss_pred EEEcCCCcCCCccCCCC--cEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEE----cCCCeEEEEeCCCccEEEE
Q 027345 100 IDYAPYGQNPPHTHPRA--TEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF----PIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a--~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~----P~G~~H~~~N~G~~~a~~~ 173 (224)
..+++|..+-..-.+ . ..+.+|++|.+.+...++++ .+.....+.+||++-. .....+..... +++.++
T Consensus 8 ~~~~~g~~i~~~g~~-~~~~~~y~v~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v~ 82 (202)
T 2zcw_A 8 VSFKAGDVILYPGVP-GPRDRAYRVLEGLVRLEAVDEEG--NALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRLE 82 (202)
T ss_dssp EEECTTCEEECSBSC-CTTCCCEEEEESCEEEEEECTTS--CEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEEE
T ss_pred EEECCCCEEECCCCC-CCCCeEEEEEeCEEEEEEECCCC--cEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEEE
Confidence 457777755332233 5 67899999999998776652 4555678999998743 12223344443 445555
Q ss_pred EEecCC-CCcee----------------------------ecchhhhc-------------CCCCCCHHHHHhhcCCCHH
Q 027345 174 ASLGSQ-FPGVI----------------------------TIADTVFG-------------ADPPINPDFLGKAFQLDPN 211 (224)
Q Consensus 174 ~~~~s~-~pg~~----------------------------~~~~~~f~-------------~~p~~~~~vla~af~~~~~ 211 (224)
.+ ... .|... .++..+.. -..+++.+-||...+++.+
T Consensus 83 ~i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~ 161 (202)
T 2zcw_A 83 PL-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRE 161 (202)
T ss_dssp EC-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHH
T ss_pred EE-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHH
Confidence 44 221 12110 00111110 0013788999999999999
Q ss_pred HHHHHhhhhc
Q 027345 212 VVKDLQKKFI 221 (224)
Q Consensus 212 ~v~~l~~~~~ 221 (224)
++.++.+++.
T Consensus 162 tvsR~l~~L~ 171 (202)
T 2zcw_A 162 TVTKVIGELA 171 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887764
No 208
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=78.43 E-value=5.4 Score=32.11 Aligned_cols=119 Identities=11% Similarity=0.098 Sum_probs=71.9
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEE--cCCCeEEEEeCCCccEEEEEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF--PIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~--P~G~~H~~~N~G~~~a~~~~~ 175 (224)
....+++|..+-.---+ ...+.+|++|.+.+...++++ .+.....+.+||++-. .....+..... +++.++.+
T Consensus 33 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~G~~~G~~l~~~~~~~~~A~--~~~~v~~i 107 (250)
T 3e6c_C 33 LIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDG--SEKLLYYAGGNSLIGKLYPTGNNIYATAM--EPTRTCWF 107 (250)
T ss_dssp EEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTS--CEEEEEEECTTCEECCCSCCSCCEEEEES--SSEEEEEE
T ss_pred eEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC--CEEEEEEecCCCEEeeecCCCCceEEEEc--ccEEEEEE
Confidence 45567888765333233 678999999999998876652 5556678999998842 22223333333 44544433
Q ss_pred ec-------CCCCcee----------------------------ecchhh------hcC--------CCCCCHHHHHhhc
Q 027345 176 LG-------SQFPGVI----------------------------TIADTV------FGA--------DPPINPDFLGKAF 206 (224)
Q Consensus 176 ~~-------s~~pg~~----------------------------~~~~~~------f~~--------~p~~~~~vla~af 206 (224)
-. .++|... .++..+ ++. ..+++.+-||...
T Consensus 108 ~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~l 187 (250)
T 3e6c_C 108 SEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEIT 187 (250)
T ss_dssp CHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHH
T ss_pred cHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHh
Confidence 11 1234221 001111 110 1248999999999
Q ss_pred CCCHHHHHHHhhhhc
Q 027345 207 QLDPNVVKDLQKKFI 221 (224)
Q Consensus 207 ~~~~~~v~~l~~~~~ 221 (224)
|++.+++.++.+++.
T Consensus 188 G~sr~tvsR~l~~L~ 202 (250)
T 3e6c_C 188 GVHHVTVSRVLASLK 202 (250)
T ss_dssp TCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999999999888764
No 209
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=78.05 E-value=1.6 Score=38.08 Aligned_cols=58 Identities=19% Similarity=0.351 Sum_probs=37.4
Q ss_pred CCcCCCccCCC-------------CcEEEEEEeC----EEEEEEEecCCC-------CC----eEEEEEEcCCCEEEEcC
Q 027345 105 YGQNPPHTHPR-------------ATEILVVLEG----TLYVGFVTSNQL-------NN----TLIAKVLNKGDVFVFPI 156 (224)
Q Consensus 105 gg~~ppH~Hp~-------------a~Ei~yVl~G----~~~~~~~~~~~~-------~~----~~~~~~L~~GDv~~~P~ 156 (224)
+.-...|.||+ -+|+.|+++. ++.++......+ .+ -+....+++||.+++|+
T Consensus 93 ~~~LSiQvHPd~~~A~~~e~~~~gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipa 172 (319)
T 1qwr_A 93 KEDTSIKVHPDDYYAGENEEGELGKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPS 172 (319)
T ss_dssp SSCCCEEECCCHHHHHHHTTTCCCCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECT
T ss_pred CCCcCcccCcCHHHHHHhcCCCCCCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCC
Confidence 55566666642 4799999985 344442111000 00 12578999999999999
Q ss_pred CCeEEE
Q 027345 157 GMIHFQ 162 (224)
Q Consensus 157 G~~H~~ 162 (224)
|.+|..
T Consensus 173 Gt~HA~ 178 (319)
T 1qwr_A 173 GTLHAL 178 (319)
T ss_dssp TCCEEE
T ss_pred CCceEe
Confidence 999976
No 210
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=75.49 E-value=25 Score=29.91 Aligned_cols=67 Identities=9% Similarity=-0.110 Sum_probs=46.1
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEE-EEEeCEEEEEEEecCCCCCeEEEEEE--cC--------CCEEEEcCCCeEEEE
Q 027345 95 ISAVRIDYAPYGQNPPHTHPRATEIL-VVLEGTLYVGFVTSNQLNNTLIAKVL--NK--------GDVFVFPIGMIHFQF 163 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~-yVl~G~~~~~~~~~~~~~~~~~~~~L--~~--------GDv~~~P~G~~H~~~ 163 (224)
+.+.+++|++|.......-. .|+. +.+.|++++.+.++ ++.+ .. .|++++|+|.--.+.
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~--~E~~iv~l~G~~~V~~~g~--------~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~ 98 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDE--RERCLVLVAGLASVXAADS--------FFYRIGQRMSPFERIPAYSVYLPHHTEAXVT 98 (270)
T ss_dssp CEEEEEEECTTCEEEECCSS--EEEEEEEEESCEEEEETTE--------EEEEECCCSSGGGCSCCCEEEECSSCCEEEE
T ss_pred eEEEEEEecCCCEEEecCCC--cEEEEEEecceEEEEECCE--------EEeccccccccccCCCCcEEEECCCCEEEEE
Confidence 67788889999987776553 4654 56789999887432 2433 22 599999999965566
Q ss_pred eCCCccEEEE
Q 027345 164 NIGKTNAVAF 173 (224)
Q Consensus 164 N~G~~~a~~~ 173 (224)
..+ ++++.
T Consensus 99 a~~--~~~~~ 106 (270)
T 2qjv_A 99 AET--DLELA 106 (270)
T ss_dssp ESS--SEEEE
T ss_pred ecC--CceEE
Confidence 554 45554
No 211
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=73.64 E-value=9 Score=30.53 Aligned_cols=118 Identities=12% Similarity=0.058 Sum_probs=69.2
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcC---CC----eEEEEeCCCccEE
Q 027345 99 RIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPI---GM----IHFQFNIGKTNAV 171 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~---G~----~H~~~N~G~~~a~ 171 (224)
...+++|..+-.--- ....+.+|++|.+.+...++++ .+.....+ +||++-... +. .+...... +++.
T Consensus 20 ~~~~~~ge~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G--~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~ 94 (238)
T 2bgc_A 20 PKQFHKKELIFNQWD-PQEYCIFLYDGITKLTSISENG--TIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQAT 94 (238)
T ss_dssp CEEEETTCEEECTTC-CCCEEEEEEESEEEEEEECTTS--CEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEE
T ss_pred EEEECCCCEEEeCCC-CCceEEEEEecEEEEEEECCCC--CEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceE
Confidence 345777776522222 2678999999999998876652 44444556 999885432 22 34555543 4565
Q ss_pred EEEEec-------CCCCceee----------------------------cchhh------hcC--------CC-CCCHHH
Q 027345 172 AFASLG-------SQFPGVIT----------------------------IADTV------FGA--------DP-PINPDF 201 (224)
Q Consensus 172 ~~~~~~-------s~~pg~~~----------------------------~~~~~------f~~--------~p-~~~~~v 201 (224)
++.+=. .++|.... ++..+ ++. .- +++.+-
T Consensus 95 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~~~t~~~ 174 (238)
T 2bgc_A 95 AYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQE 174 (238)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHEEEETTEEEECCSCCCHHH
T ss_pred EEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCceEEEeccCCHHH
Confidence 554321 12332100 01111 110 11 488999
Q ss_pred HHhhcCCCH-HHHHHHhhhhc
Q 027345 202 LGKAFQLDP-NVVKDLQKKFI 221 (224)
Q Consensus 202 la~af~~~~-~~v~~l~~~~~ 221 (224)
||...|++. +++.++.+++.
T Consensus 175 lA~~lG~sr~etvsR~l~~l~ 195 (238)
T 2bgc_A 175 LGYSSGIAHSSAVSRIISKLK 195 (238)
T ss_dssp HHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHhCCChHHHHHHHHHHHH
Confidence 999999999 79988887764
No 212
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=72.85 E-value=2.8 Score=37.61 Aligned_cols=24 Identities=21% Similarity=0.173 Sum_probs=20.8
Q ss_pred eEEEEEEcCCCEEEEcCCCeEEEE
Q 027345 140 TLIAKVLNKGDVFVFPIGMIHFQF 163 (224)
Q Consensus 140 ~~~~~~L~~GDv~~~P~G~~H~~~ 163 (224)
-+....|++||.+++|+|.+|..-
T Consensus 238 lLn~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 238 LLNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp HEEEEEECTTCEEEECTTCCEEEE
T ss_pred hheEEECCCCCEEEcCCCCceEcC
Confidence 356788999999999999999763
No 213
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=70.77 E-value=8.6 Score=29.71 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=34.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+.||..+-.--.+ +.++.+|++|++.+.. ++ ++ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~---g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SD---GV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TT---SC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cC---Ce-EEEEecCCCEe
Confidence 455678888865333233 6789999999999875 33 34 46789999987
No 214
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=69.09 E-value=15 Score=29.85 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=38.1
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+.+|..+-..-.+ +..+.+|++|++.+.....+++ .......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~-~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENE-EFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTS-CEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCC-ccEEEEEeCCCCEe
Confidence 456678888766444333 6789999999999886554310 23557889999988
No 215
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=66.95 E-value=6.5 Score=30.59 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=33.0
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+.||..+-..-.+ +.++.+|++|.+.+.. ++ ++ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~---g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KG---NK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TT---SC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CC---Ce--EEEEcCCCEe
Confidence 345678888865433333 6789999999998752 33 33 2478999987
No 216
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=66.54 E-value=12 Score=31.50 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=36.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+++|..+-.-=.+ +..+.+|++|.+.+...+.+ ++.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~---g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDD---GVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTT---CCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCC---CcEEEEEecCCCEe
Confidence 45667787754322222 67899999999999887665 33367889999987
No 217
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=65.61 E-value=10 Score=27.68 Aligned_cols=48 Identities=25% Similarity=0.310 Sum_probs=32.7
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
....+++|..+-.--- ....+.+|++|.+.+.. . +. ....+.+||++=
T Consensus 51 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~--~----~~-~~~~~~~G~~fG 98 (160)
T 4f8a_A 51 QTVHCAPGDLIYHAGE-SVDSLCFVVSGSLEVIQ--D----DE-VVAILGKGDVFG 98 (160)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESEEEEEE--T----TE-EEEEEETTCEEE
T ss_pred eeeeeCCCCEEEeCCC-CccEEEEEEeeEEEEEE--C----CE-EEEEecCCCEeC
Confidence 3456777775432222 26799999999999865 2 22 357899999874
No 218
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=65.01 E-value=10 Score=27.85 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=33.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-.-=.+ ...+.+|++|.+.+.. . ++. ...+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~--~----~~~-~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV--N----NEW-ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEE--T----TEE-EEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEE--C----CEE-EEEecCCCEe
Confidence 345678888765333233 6889999999999875 2 332 4679999986
No 219
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=64.85 E-value=8.9 Score=33.71 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=28.7
Q ss_pred eEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 140 TLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 140 ~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.++..+=++||.+++++|..|+.+|.|-.-.+.+
T Consensus 277 Pvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 277 PVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred CeEEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 5678889999999999999999999997555444
No 220
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=62.45 E-value=22 Score=31.47 Aligned_cols=52 Identities=8% Similarity=-0.042 Sum_probs=37.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+--.-.+ +..+.+|++|++.+... .++ .......+.+||++
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~-~~G--~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVK-CDG--VGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEE-CSS--CEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEe-cCC--CEEEEEEecCCCEE
Confidence 455678888865444343 68999999999998873 331 44556789999976
No 221
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=62.34 E-value=6.2 Score=35.97 Aligned_cols=23 Identities=26% Similarity=0.216 Sum_probs=19.9
Q ss_pred EEEEEEcCCCEEEEcCCCeEEEE
Q 027345 141 LIAKVLNKGDVFVFPIGMIHFQF 163 (224)
Q Consensus 141 ~~~~~L~~GDv~~~P~G~~H~~~ 163 (224)
+....|++||.+++|+|.+|...
T Consensus 265 LN~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 265 LNHVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred cceEecCCCCEEecCCCCccccC
Confidence 45678999999999999999764
No 222
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=61.19 E-value=17 Score=29.85 Aligned_cols=52 Identities=19% Similarity=0.291 Sum_probs=36.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEe-cCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVT-SNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~-~~~~~~~~~~~~L~~GDv~ 152 (224)
....+.+|..+-.--- .+..+.+|++|++.+.... .++ .......+.+||++
T Consensus 181 ~~~~~~~g~~I~~~G~-~~~~~yiI~~G~v~~~~~~~~~g--~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQGA-RGDTFFIISKGKVNVTREDSPNE--DPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECTTC-EECEEEEEEESEEEEEECCSSSC--CCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeCCC-CCCEEEEEEeeEEEEEEecCCCC--cceEEEEcCCCCEe
Confidence 4566788775533222 2678999999999998765 231 44556889999987
No 223
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=61.07 E-value=3 Score=32.81 Aligned_cols=119 Identities=9% Similarity=0.148 Sum_probs=69.2
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcC---CC---eEEEEeCCCccEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPI---GM---IHFQFNIGKTNAV 171 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~---G~---~H~~~N~G~~~a~ 171 (224)
....+++|..+-..-.+ ...+.+|++|.+.+...++++ .+.....+.+||++-... +. .+..... +++.
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~ 107 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG--QEKILEVTNERNTFAEAMMFMDTPNYVATAQAV--VPSQ 107 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGG--CCBCCCEECTTEEESCTTTTTTCSBCSSCEEES--SCCE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEc--CcEE
Confidence 44567777755333233 678999999999988765542 344457789999874321 22 2233333 3344
Q ss_pred EEEEec-------CCCCceeec----------------------------chhhh---c--------CCCCCCHHHHHhh
Q 027345 172 AFASLG-------SQFPGVITI----------------------------ADTVF---G--------ADPPINPDFLGKA 205 (224)
Q Consensus 172 ~~~~~~-------s~~pg~~~~----------------------------~~~~f---~--------~~p~~~~~vla~a 205 (224)
++.+-. .++|..... +..+. . -..+++.+-||..
T Consensus 108 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~t~~~lA~~ 187 (227)
T 3dkw_A 108 LFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGH 187 (227)
T ss_dssp EEEEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCSCTHHHHHH
T ss_pred EEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEEEecCCHHHHHHH
Confidence 443311 244432110 11110 0 1124788999999
Q ss_pred cCCCHHHHHHHhhhhc
Q 027345 206 FQLDPNVVKDLQKKFI 221 (224)
Q Consensus 206 f~~~~~~v~~l~~~~~ 221 (224)
.|++.+++.++.+++.
T Consensus 188 lg~sr~tvsR~l~~l~ 203 (227)
T 3dkw_A 188 LSIQPETFSRIMHRLG 203 (227)
T ss_dssp TTSCHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHH
Confidence 9999999998888764
No 224
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=60.43 E-value=14 Score=26.42 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=32.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+++|..+-.--. ....+.+|++|.+.+.- + ++ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~---~---g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---E---GV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECTTS-CCCEEEEEEECCEEEEE---T---TE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeCCC-cCCEEEEEEeCEEEEEE---C---CE-EEEEeCCCCEe
Confidence 4566778775533222 36789999999999842 2 33 35788999986
No 225
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=58.67 E-value=23 Score=28.09 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=46.7
Q ss_pred CCCccCCCCcEEEEEEeCEEEEEEEecCC---CCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEE
Q 027345 108 NPPHTHPRATEILVVLEGTLYVGFVTSNQ---LNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFA 174 (224)
Q Consensus 108 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~---~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~ 174 (224)
...=.||.++|.+.-+.|.-.+-++.+.+ +-++++.+...+|+.+-+-+|+.|.-.-.-+++..++.
T Consensus 71 ~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~v 140 (175)
T 2bdr_A 71 RMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLV 140 (175)
T ss_dssp CEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEE
T ss_pred eEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEE
Confidence 34457888999999999986555554432 11457789999999999999999964322233444443
No 226
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=58.22 E-value=11 Score=26.78 Aligned_cols=45 Identities=20% Similarity=0.204 Sum_probs=31.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+++|..+-.--.+ ...+.+|++|.+.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~------~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATP------N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSS------S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeC------C---cceECCCCEe
Confidence 45678888865433333 67899999999997632 2 2478899876
No 227
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=57.25 E-value=12 Score=29.17 Aligned_cols=49 Identities=22% Similarity=0.154 Sum_probs=34.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
+....+.||..+-.---+ +.++.+|++|++.+.. . + .....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~--~----~-~~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLK--D----N-TVLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEES--S----S-CEEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEE--C----C-eEEEEecCCCCcC
Confidence 345678888865333233 6899999999999774 2 2 2357899999874
No 228
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=56.80 E-value=15 Score=26.18 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=31.1
Q ss_pred EEEEEc-CCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYA-PYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~-pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+. +|..+-.- ......+.+|++|.+.+.. .+ ++. ..+.+||++
T Consensus 40 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~--~~---g~~--~~l~~G~~f 87 (134)
T 2d93_A 40 IFEVVEQAGAIILED-GQELDSWYVILNGTVEISH--PD---GKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEECSSSCEEECT-TCEECEEEECCBSCEEEEC--SS---SCE--EEECTTCEE
T ss_pred eEEEecCCCCEEEeC-CCCCCeEEEEEeCEEEEEc--CC---CcE--EEecCCCcc
Confidence 455677 77654222 2236779999999999763 33 443 669999976
No 229
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=56.80 E-value=18 Score=28.56 Aligned_cols=67 Identities=16% Similarity=0.151 Sum_probs=46.9
Q ss_pred CCccCCCCcEEEEEEeCEEEEEEEecCC---CCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEEEE
Q 027345 109 PPHTHPRATEILVVLEGTLYVGFVTSNQ---LNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFAS 175 (224)
Q Consensus 109 ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~---~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~~~ 175 (224)
.+=.||.++|.++-+.|...+-++.+++ +-++++.+...+|+.+.+-+|+.|.-.-.-+++..++.+
T Consensus 70 ~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 70 ELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 3456888999999999986655544431 114677899999999999999999843332345555533
No 230
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=54.40 E-value=13 Score=29.30 Aligned_cols=47 Identities=15% Similarity=0.052 Sum_probs=32.9
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+++|..+-.--.+ +..+.+|++|++.+...+ .. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~~-----~~--~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVND-----NK--VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEESTT-----SC--CEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEECC-----EE--EEecCCCCee
Confidence 35667777755333333 789999999999987421 22 3789999988
No 231
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=53.98 E-value=23 Score=31.15 Aligned_cols=57 Identities=16% Similarity=0.056 Sum_probs=38.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 154 (224)
+....+++|..+-.--. .+..+.+|++|.+.+...+.++.........+.+||++=.
T Consensus 65 ~~~~~~~~g~~i~~~Gd-~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQGD-IGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeCCC-CCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 34557888876532222 3678999999999998766542101256789999998843
No 232
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=53.15 E-value=20 Score=33.45 Aligned_cols=87 Identities=21% Similarity=0.269 Sum_probs=53.7
Q ss_pred cccCCCCCCccceEEEEEEEcCCCcCCCccCCC-CcEEEEEEeCEEEEEEEecCC-------------------------
Q 027345 83 NVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPR-ATEILVVLEGTLYVGFVTSNQ------------------------- 136 (224)
Q Consensus 83 ~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~-a~Ei~yVl~G~~~~~~~~~~~------------------------- 136 (224)
-...++|+|+--+.+. .+|...++|.=.. -.-+-|-+.|.=.+++.-+..
T Consensus 252 ~~~~I~Gvn~pqLYig----~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e~l~~k~~~~~~~~~~~~~p 327 (531)
T 3avr_A 252 VGHTILGMNTVQLYMK----VPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLNDFCEKNNLNFLMGSWWPNL 327 (531)
T ss_dssp SCSCCBTTSSCEEEEE----CTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCCCH
T ss_pred cCCCCCCcChhheEee----cCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHHHHHHHcCCChhhceeecCH
Confidence 3456677775443333 3677778875321 234455555443344432210
Q ss_pred -----CCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 137 -----LNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 137 -----~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+=.++..+=++||.+++++|..||.+|.|-.-.+.+
T Consensus 328 ~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 328 EDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp HHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred HHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 0234667899999999999999999999997555444
No 233
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=52.73 E-value=30 Score=34.16 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=39.6
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEE
Q 027345 96 SAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~ 153 (224)
.+....+++|..+=--=.+ ++.+.+|++|++.+.+.++.+.+.......+.+||.|-
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFG 120 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (999)
T ss_dssp HCEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEEC
T ss_pred heEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchh
Confidence 4555678888765333344 78999999999999886543222344567899999873
No 234
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=49.77 E-value=1.2e+02 Score=25.89 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=40.2
Q ss_pred EEEcCCCcCCCccCCCCcEEEE-EEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC--CccEEEE
Q 027345 100 IDYAPYGQNPPHTHPRATEILV-VLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG--KTNAVAF 173 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~y-Vl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G--~~~a~~~ 173 (224)
+.|+.|....-.+--...|+.+ .+.|.+++.+.++ ++.|.+-|.+++|+|.--...... ..++++.
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vdg~--------~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEIDGA--------KETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEETTE--------EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEECCE--------EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 4455554433332223567665 5578898887432 468999999999999764444322 3455544
No 235
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=49.56 E-value=28 Score=27.19 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=33.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
....+.+|..+-.---+ +..+.+|.+|++.+...+. + ....+.+||++
T Consensus 149 ~~~~~~~g~~i~~~g~~-~~~~y~I~~G~v~v~~~~~----~--~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREGDQ-GENFYLIEYGAVDVSKKGQ----G--VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEECEEEEEETTT----E--EEEEEETTCEE
T ss_pred heEEeCCCCEEEeCCCc-CCEEEEEEecEEEEEEcCC----c--eEEEcCCCCcc
Confidence 44567777765333233 6889999999999875432 2 35789999977
No 236
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=47.74 E-value=28 Score=32.26 Aligned_cols=91 Identities=19% Similarity=0.231 Sum_probs=57.2
Q ss_pred EEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCC-CcEEEEEEeCEEEEEEEecCC---------------------
Q 027345 79 VTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPR-ATEILVVLEGTLYVGFVTSNQ--------------------- 136 (224)
Q Consensus 79 v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~-a~Ei~yVl~G~~~~~~~~~~~--------------------- 136 (224)
+..--...+||+|+--+.+. .+|...++|.=.. -.-+-|-+-|.-..++.-+..
T Consensus 223 lLs~l~~~I~GVNtpqLYig----m~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~ 298 (510)
T 4ask_A 223 MLSHVGHTILGMNTVQLYMK----VPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSW 298 (510)
T ss_dssp GGGGSSSCCTTTTSCEEEEE----CTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCB
T ss_pred hhhhCCCcCCCcChhheEEc----cccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccc
Confidence 33344567888886544443 5677778885221 234555555544444433321
Q ss_pred ---------CCCeEEEEEEcCCCEEEEcCCCeEEEEeCCCccEEEE
Q 027345 137 ---------LNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAF 173 (224)
Q Consensus 137 ---------~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G~~~a~~~ 173 (224)
.+=.++..+=++||.+++++|..||.+|.|-..-+.+
T Consensus 299 ~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaW 344 (510)
T 4ask_A 299 WPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 344 (510)
T ss_dssp CCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred cCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEE
Confidence 0225667889999999999999999999997544444
No 237
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=47.24 E-value=24 Score=28.69 Aligned_cols=48 Identities=15% Similarity=0.210 Sum_probs=34.4
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-..-.+ +..+.+|++|++.+.. . ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~--~----g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV--N----NE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEE--T----TE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEE--C----Ce-EEEEcCCCCcc
Confidence 345678888765433333 6889999999999876 2 33 36789999987
No 238
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=44.79 E-value=1.7e+02 Score=25.98 Aligned_cols=77 Identities=17% Similarity=0.071 Sum_probs=48.5
Q ss_pred EEEecccCCCCCCccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCC
Q 027345 79 VTNANVEQIPGLNTLGISAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIG 157 (224)
Q Consensus 79 v~~~~~~~~P~l~~~gis~~~v~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G 157 (224)
.+.+.....|-+..+ ....+++.-++...- --| +.--..|++|++++.+..++ ......|+++|..++-+=
T Consensus 320 Ye~AS~A~~phlPdl--~g~~l~Vd~~d~~~DL~d~--ge~hY~v~~G~lTL~W~~~d----Gt~~a~L~PDgSAwv~PF 391 (443)
T 3g7d_A 320 YEAASMASAAHLPDL--VGSFLRVDADGRGADLIDH--AENHYVVTEGRLTLEWDGPD----GPASVELEPDGSAWTGPF 391 (443)
T ss_dssp EEEEECCCCTTCTTC--EEEEEEEC------CBCCS--SEEEEEEEESCEEEEEEETT----EEEEEEECTTCEEEECTT
T ss_pred eehhhhhccccCCCc--eeEEEEecCCCcchhhhhc--ccceEEEecCceEEEecCCC----CccceEECCCCceeeccc
Confidence 555555566665533 222233333322111 112 34445688999999998774 447899999999999999
Q ss_pred CeEEEE
Q 027345 158 MIHFQF 163 (224)
Q Consensus 158 ~~H~~~ 163 (224)
+.|.+.
T Consensus 392 V~H~w~ 397 (443)
T 3g7d_A 392 VRHRWH 397 (443)
T ss_dssp CCEEEE
T ss_pred cccccc
Confidence 999997
No 239
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=42.80 E-value=51 Score=25.09 Aligned_cols=55 Identities=13% Similarity=0.062 Sum_probs=39.8
Q ss_pred CCCccCCCCcEEEEEEeCEEEEEEEecCC----------C--------CCeEEEEEEcCCCEEEEcCCCeEEE
Q 027345 108 NPPHTHPRATEILVVLEGTLYVGFVTSNQ----------L--------NNTLIAKVLNKGDVFVFPIGMIHFQ 162 (224)
Q Consensus 108 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~----------~--------~~~~~~~~L~~GDv~~~P~G~~H~~ 162 (224)
..+=.|.+-..+-|+++|+=.+++..... + +.......|++|+..+|-++-+|.-
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p 132 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKP 132 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccc
Confidence 45557877899999999988888764210 0 1112356889999999999999975
No 240
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=41.30 E-value=28 Score=28.47 Aligned_cols=48 Identities=15% Similarity=0.172 Sum_probs=34.1
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-..-.+ +..+.+|++|++.+.. . ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~--~----g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK--E----GV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE--T----TE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE--C----CE-EEEEeCCCCee
Confidence 445678888865444343 6789999999999843 2 33 35789999987
No 241
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=40.24 E-value=4.9 Score=28.82 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=28.0
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEE--EEcCCCEE
Q 027345 100 IDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAK--VLNKGDVF 152 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~--~L~~GDv~ 152 (224)
..+++|..+-.. ......+.+|++|++.+. ..+++ .+.... .+.+||++
T Consensus 32 ~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~-~~~~g--~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLVRE-GDPVNEMLFIIRGRLESV-TTDGG--RSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEECT-TSBCSEEEEEEECCCEEE-CCSSC--SSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEEeC-CCCCCeEEEEEeeEEEEE-EcCCC--cceeeeeeeecCCCEe
Confidence 345555543221 223678999999999954 33331 221123 88899865
No 242
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=40.15 E-value=44 Score=28.93 Aligned_cols=51 Identities=18% Similarity=0.190 Sum_probs=33.6
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 100 IDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
..+.+|..+-.--.+ +..+.+|++|++.+.....+++ .......+.+||.|
T Consensus 274 ~~~~~ge~I~~eGd~-~~~~yiI~~G~v~v~~~~~~~~-~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGEP-GDDFYIITEGTASVLQRRSPNE-EYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTSB-CCEEEEEEESCEEEECCSSSSS-CCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCCC-ceEEEEEeCCCCEe
Confidence 346666654333233 6889999999999887654311 13346789999987
No 243
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=38.57 E-value=45 Score=28.52 Aligned_cols=50 Identities=16% Similarity=0.084 Sum_probs=33.8
Q ss_pred CcEEEE-EEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEEEEeCC--CccEEEE
Q 027345 116 ATEILV-VLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG--KTNAVAF 173 (224)
Q Consensus 116 a~Ei~y-Vl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~G--~~~a~~~ 173 (224)
..|+.+ .+.|.+++.+.++ ++.|.+-|.+++|+|.-....... ..++++.
T Consensus 78 ~rE~~iV~l~G~~~V~vdG~--------~f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 78 RRELGVINIGGAGTITVDGQ--------CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp TEEEEEEECSSCEEEEETTE--------EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred CcEEEEEEccCeEEEEECCE--------EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 466655 5678998887432 468999999999999864444322 3455554
No 244
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=38.19 E-value=43 Score=29.48 Aligned_cols=55 Identities=15% Similarity=0.109 Sum_probs=33.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecC----CCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN----QLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~----~~~~~~~~~~L~~GDv~ 152 (224)
+....+.+|..+-.--. .+..+.+|++|++.+.....+ ..+.......+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~eGd-~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGD-LADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 34556788875433223 368999999999998765432 00133446789999987
No 245
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=37.18 E-value=38 Score=27.38 Aligned_cols=87 Identities=13% Similarity=0.049 Sum_probs=46.9
Q ss_pred CCCeeeecCCCCCCccCCCCceEEEecccCCCCCCccceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCC
Q 027345 57 AEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 136 (224)
Q Consensus 57 ~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gis~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 136 (224)
-+-|.|+|...- ...-.++.++-.|...-++--. ..+.++.+. +... .+.+. ..-++|+++|++.+...+
T Consensus 88 ~~p~~F~G~~~v--~a~L~~G~~~DfNlM~rr~~~~--~~v~~~~~~-~~~~-~~~~~-~~~~v~~l~G~~~v~~~~--- 157 (200)
T 1yll_A 88 RQAFAFSGDSEV--HCTLLDGAIRDFNLIYAPRRHR--ARLQWLRVE-GELD-WHGTA-STLLLFAQQDGVAISLQG--- 157 (200)
T ss_dssp TCCEEEETTSCE--EEEESSSCEEEEEEEECTTTEE--EEEEEEEEE-EEEE-EEECC-SEEEEEESSSCEEEEETT---
T ss_pred CCcEEeCCCCcE--EEEECCCCEEEEEEEEcCCccE--EEEEEEecC-CCee-EcCCC-CEEEEEEccCcEEEEcCC---
Confidence 456777765322 1122334466666555554211 122222222 2211 11222 467899999999886531
Q ss_pred CCCeEEEEEEcCCCEEEEcCC
Q 027345 137 LNNTLIAKVLNKGDVFVFPIG 157 (224)
Q Consensus 137 ~~~~~~~~~L~~GDv~~~P~G 157 (224)
+ ....|.+||.+++-..
T Consensus 158 --~--~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 158 --Q--PRGQLAAHDCLCAEGL 174 (200)
T ss_dssp --E--EEEEECTTCEEEEESC
T ss_pred --C--ceeecCCCCEEEEeCC
Confidence 1 2588999999998665
No 246
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=28.72 E-value=35 Score=29.60 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=34.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
+....+++|..+-..-.+ +..+.+|++|++.+.. . ++ ....+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~--~----~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYV--N----GE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEE--T----TE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEE--C----Ce-EeeeCCCCCEE
Confidence 455678888876554444 7889999999999875 2 33 24679999986
No 247
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=28.53 E-value=85 Score=27.39 Aligned_cols=46 Identities=17% Similarity=0.139 Sum_probs=32.5
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEE
Q 027345 100 IDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~ 152 (224)
..+++|..+-..-.+ +..+.+|++|++.+...+ . .....+.+||+|
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~~-----~-~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIYG-----K-GVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEETT-----T-EEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEcC-----C-eeEEEecCCCEE
Confidence 367788765333333 789999999999987532 2 246789999977
No 248
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=27.60 E-value=2.4e+02 Score=22.71 Aligned_cols=109 Identities=14% Similarity=0.148 Sum_probs=63.3
Q ss_pred EEEEEEEcCCC-cCCCccCCCCcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcC----CC--EEEEcCCCeEEEEeC-CC
Q 027345 96 SAVRIDYAPYG-QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNK----GD--VFVFPIGMIHFQFNI-GK 167 (224)
Q Consensus 96 s~~~v~l~pgg-~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~----GD--v~~~P~G~~H~~~N~-G~ 167 (224)
+....-|.++. ...+|.- +++|+.+-..|.....+..++ ++..+.+|.+ |+ -++||+|....-+.. +.
T Consensus 80 TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~d---g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~ 155 (203)
T 1xe7_A 80 TLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPD---GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNE 155 (203)
T ss_dssp EEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTT---SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCT
T ss_pred eEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCC---CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCC
Confidence 44445567775 4566654 499999999996554566654 5555666654 55 589999999887654 22
Q ss_pred ccE--EEEEEecCCCCceeecchhhhcCCCCCCHH-HHHhhcCCCHHHHHHHhh
Q 027345 168 TNA--VAFASLGSQFPGVITIADTVFGADPPINPD-FLGKAFQLDPNVVKDLQK 218 (224)
Q Consensus 168 ~~a--~~~~~~~s~~pg~~~~~~~~f~~~p~~~~~-vla~af~~~~~~v~~l~~ 218 (224)
+.. .+++.. -.||+..-. |.. .+.+ -|.+.|. ++.++.|+-
T Consensus 156 ~~~~~tLVgCt--VaPGFdF~d---Fel---~~~~~~L~~~~P--~~~~~~l~~ 199 (203)
T 1xe7_A 156 EFDNGFLISEV--VVPGFDFED---HTF---LKGEDELKHLVG--PEKAAELAF 199 (203)
T ss_dssp TTTTCEEEEEE--ESSCCCGGG---EEE---CCHHHHHHHHHC--HHHHHHTGG
T ss_pred CcccceEEEEE--ecCCccchh---cEe---cCCcHHHHHHCC--HHHHHHHHH
Confidence 221 233222 345543322 222 3444 4555454 677777653
No 249
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=25.02 E-value=2.2e+02 Score=25.22 Aligned_cols=74 Identities=18% Similarity=0.129 Sum_probs=51.4
Q ss_pred EEEEcC---------CCEEEEcCCCeEEEEeCCCccEEEEEEecCCC-------------C----------ceeec---c
Q 027345 143 AKVLNK---------GDVFVFPIGMIHFQFNIGKTNAVAFASLGSQF-------------P----------GVITI---A 187 (224)
Q Consensus 143 ~~~L~~---------GDv~~~P~G~~H~~~N~G~~~a~~~~~~~s~~-------------p----------g~~~~---~ 187 (224)
..+|++ ||.++-|+-.+|...-.++.|+.+++--...+ + +.... -
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 567787 99999999999999889999999987543222 0 00000 0
Q ss_pred hhhhcCCCCCCHHHHHhhcCCCHHHHHHHh
Q 027345 188 DTVFGADPPINPDFLGKAFQLDPNVVKDLQ 217 (224)
Q Consensus 188 ~~~f~~~p~~~~~vla~af~~~~~~v~~l~ 217 (224)
...+. ..+++.+-|++..|++.+.+..+-
T Consensus 236 R~ar~-ReglTQ~~LAe~TGIPq~hISeMe 264 (443)
T 3g7d_A 236 DLFLA-RRAHTRTSAAEAAGVPPADLEAAL 264 (443)
T ss_dssp HHHHH-HTTCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHH-hcCCCHHHHHHHhCCCHHHHHHHh
Confidence 11111 225889999999999998886553
No 250
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=24.62 E-value=75 Score=27.80 Aligned_cols=22 Identities=27% Similarity=0.368 Sum_probs=20.1
Q ss_pred EEEEEcCCCEEEEcCCCeEEEE
Q 027345 142 IAKVLNKGDVFVFPIGMIHFQF 163 (224)
Q Consensus 142 ~~~~L~~GDv~~~P~G~~H~~~ 163 (224)
....+++||+++|...++|.-.
T Consensus 234 ~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEEC
T ss_pred ccccCCCCcEEEEecceeecCC
Confidence 4678999999999999999887
No 251
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=23.99 E-value=21 Score=28.99 Aligned_cols=29 Identities=24% Similarity=0.344 Sum_probs=4.7
Q ss_pred CchhhHHHHHHHHHHHHhhhhccCCCCCcc
Q 027345 1 MKAVQFLSGFALLALASLLASAYDPSPLQD 30 (224)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~d~~~~~d 30 (224)
|.++++++ ++++++++....+++++++-|
T Consensus 1 ~~~~~~~~-fLl~a~~~~~~~~a~~~pVlD 29 (200)
T 2qn4_A 1 MVSLRLPL-ILLSLLAISFSCSAAPPPVYD 29 (200)
T ss_dssp -----------------------CCCBCBC
T ss_pred CccHHHHH-HHHHHHHhccccccCCCceEe
Confidence 55654422 333444332223456667766
No 252
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=22.63 E-value=79 Score=17.63 Aligned_cols=26 Identities=4% Similarity=0.091 Sum_probs=22.6
Q ss_pred CCCHHHHHhhcCCCHHHHHHHhhhhc
Q 027345 196 PINPDFLGKAFQLDPNVVKDLQKKFI 221 (224)
Q Consensus 196 ~~~~~vla~af~~~~~~v~~l~~~~~ 221 (224)
+++..-+|+.++++..+|.+..+++.
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDPV 46 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCST
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhHH
Confidence 58888999999999999998877664
No 253
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=22.49 E-value=80 Score=26.21 Aligned_cols=31 Identities=26% Similarity=0.236 Sum_probs=24.1
Q ss_pred eEEEEEEcCCCEEEEcCCCeEEE-EeCCCccE
Q 027345 140 TLIAKVLNKGDVFVFPIGMIHFQ-FNIGKTNA 170 (224)
Q Consensus 140 ~~~~~~L~~GDv~~~P~G~~H~~-~N~G~~~a 170 (224)
......+++||++++-..++|.- .|.++.+-
T Consensus 214 ~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R 245 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFR 245 (308)
T ss_dssp CCEEECBCTTCEEEECTTCCEEECCBCSSSCE
T ss_pred CeEEccCCCccEEEECCCccccCCCCCCCCce
Confidence 34578899999999999999975 46555443
No 254
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=21.51 E-value=1e+02 Score=28.28 Aligned_cols=51 Identities=18% Similarity=0.114 Sum_probs=37.0
Q ss_pred EEEEcCCCcCCCccCCC-CcEEEEEEeCEEEEEEEecCCCCCeEEEEEEcCCCEEEEcCCCeEE
Q 027345 99 RIDYAPYGQNPPHTHPR-ATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHF 161 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~-a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~ 161 (224)
|.++.|..+.+|-+|.+ .+|+.+.+.|.-... ..-+.+|.+-+-|.+.+|.
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~ak------------~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAK------------QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC--------------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhcccccccc------------ccCcCCCceeccCCCcCCC
Confidence 55788889999999955 458999999986522 1248999999999999995
No 255
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.44 E-value=73 Score=26.14 Aligned_cols=30 Identities=10% Similarity=0.276 Sum_probs=24.0
Q ss_pred eEEEEEEcCCCEEEEcCCCeEEEE-eCCCcc
Q 027345 140 TLIAKVLNKGDVFVFPIGMIHFQF-NIGKTN 169 (224)
Q Consensus 140 ~~~~~~L~~GDv~~~P~G~~H~~~-N~G~~~ 169 (224)
......+++||++++-..++|.-. |.++.+
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~ 256 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDRS 256 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSSC
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCCc
Confidence 345789999999999999999854 666544
No 256
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=21.08 E-value=2.1e+02 Score=20.23 Aligned_cols=20 Identities=20% Similarity=0.376 Sum_probs=15.3
Q ss_pred CeEEEEEEcCCCEEEEcCCC
Q 027345 139 NTLIAKVLNKGDVFVFPIGM 158 (224)
Q Consensus 139 ~~~~~~~L~~GDv~~~P~G~ 158 (224)
++.....++.||.++|+.|.
T Consensus 52 G~~~p~~VkvGD~Vlf~k~y 71 (97)
T 1pcq_O 52 GEVKPLDVKVGDIVIFNDGY 71 (97)
T ss_dssp SSCEECSCCTTCEEEECCCS
T ss_pred CCEEecccCCCCEEEECCcc
Confidence 44445679999999999943
Done!