BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027347
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ESG1|BASS4_ORYSJ Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS4 PE=3 SV=1
Length = 423
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 113/137 (82%)
Query: 77 AADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAW 136
A NFLPLALI G+A +P+LGCLA KY LSK+STF IF++SGLTLR+ E+GAA EAW
Sbjct: 92 ARSNFLPLALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAW 151
Query: 137 PVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSA 196
P G+FGL SILLFTP+ ++ I+Q++ P EF+TGLA+F CMPTTLSSGV LT L GGN+A
Sbjct: 152 PAGLFGLASILLFTPFLAQFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTA 211
Query: 197 LALAMTIISNLLGIMIV 213
LALAMT ISNLLGIMIV
Sbjct: 212 LALAMTAISNLLGIMIV 228
>sp|B8AJ09|BASS4_ORYSI Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Oryza sativa subsp. indica GN=BASS4 PE=3 SV=1
Length = 423
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 113/137 (82%)
Query: 77 AADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAW 136
A NFLPLALI G+A +P+LGCLA KY LSK+STF IF++SGLTLR+ E+GAA EAW
Sbjct: 92 ARSNFLPLALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAW 151
Query: 137 PVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSA 196
P G+FGL SILLFTP+ ++ I+Q++ P EF+TGLA+F CMPTTLSSGV LT L GGN+A
Sbjct: 152 PAGLFGLASILLFTPFLAQFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTA 211
Query: 197 LALAMTIISNLLGIMIV 213
LALAMT ISNLLGIMIV
Sbjct: 212 LALAMTAISNLLGIMIV 228
>sp|F4IZC4|BASS4_ARATH Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Arabidopsis thaliana GN=BASS4 PE=3 SV=1
Length = 436
Score = 193 bits (491), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 141/204 (69%), Gaps = 33/204 (16%)
Query: 45 RSISRPIRACRPSDQ-------DF--------------------------ASSKGLNWAK 71
R ISR IRAC+PSD+ DF AS++ L + K
Sbjct: 40 RWISRSIRACQPSDKVSGQFPFDFMYSSMLIPSSCGEWNRIHLGGDGGISASAQRLYFGK 99
Query: 72 PLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGA 131
LL A+DNFLPLAL+ GV GFANP+LGCLADKY +K ST IFI+SGLTLR+ IGA
Sbjct: 100 ELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFIISGLTLRTEAIGA 159
Query: 132 AAEAWPVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLA 191
A + WP+G+FGL SILL TP FS+LI+ VQLQP+E VTGL +F CMPTTLSSGVALTHLA
Sbjct: 160 AVKGWPLGLFGLISILLLTPSFSRLIMLVQLQPRELVTGLGIFCCMPTTLSSGVALTHLA 219
Query: 192 GGNSALALAMTIISNLLGIMIVSY 215
GGN+ALALA+T+ SNLLGI+ + +
Sbjct: 220 GGNAALALAVTVASNLLGILTIPF 243
>sp|Q7T0V6|NTP7A_XENLA Sodium/bile acid cotransporter 7-A OS=Xenopus laevis GN=slc10a7-a
PE=2 SV=1
Length = 343
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 100 GCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ 159
G L + ++ + AIF SGL+L++ E+ A + +F L+F P L LQ
Sbjct: 34 GPLKPEITITYIAVSAIFFNSGLSLKTEELTNALMHVKLHLFVQLFTLVFFPTAIWLFLQ 93
Query: 160 V-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMI 212
V L P + + GL SCMP +SS V LT GGN A A+ + + LGI++
Sbjct: 94 VLSLTPINEWLLKGLQTVSCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVV 149
>sp|Q52KD1|NTP7B_XENLA Sodium/bile acid cotransporter 7-B OS=Xenopus laevis GN=slc10a7-b
PE=2 SV=1
Length = 343
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 100 GCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ 159
G L + ++ + AIF SGL+L++ E+ A + +F L+F P + LQ
Sbjct: 34 GPLKPEITITYIAVSAIFFNSGLSLKTEELTNALMHVKLHLFVQLFTLVFFPTAIWIFLQ 93
Query: 160 V-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMI 212
V L P + + GL SCMP +SS V LT GGN A A+ + + LGI++
Sbjct: 94 VLSLTPINEWLLKGLQTVSCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVV 149
>sp|Q28HF8|NTCP7_XENTR Sodium/bile acid cotransporter 7 OS=Xenopus tropicalis GN=slc10a7
PE=2 SV=1
Length = 343
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 100 GCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ 159
G L + ++ + AIF SGL+L++ E+ A + +F L+F P + LQ
Sbjct: 34 GPLKPEITITYIAVSAIFFNSGLSLKTEELTNALMHVKLHLFVQLFTLVFFPTAIWVFLQ 93
Query: 160 V-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMI 212
V L P + + GL SCMP +SS V LT GGN A A+ + + LGI++
Sbjct: 94 VLSLTPINEWLLKGLQTVSCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVV 149
>sp|Q0GE19|NTCP7_HUMAN Sodium/bile acid cotransporter 7 OS=Homo sapiens GN=SLC10A7 PE=2
SV=1
Length = 358
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 73 LLKIAADNFLPLALIGGVAFGFANPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGE 128
LL+ ++ + ++ +A PS+G L + +S + IF SGL+L++ E
Sbjct: 3 LLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEE 62
Query: 129 IGAAAEAWPVGIFGLFSILLFTPYFSKLILQV-QLQP--QEFVTGLALFSCMPTTLSSGV 185
+ +A + +F L F P L LQ+ + P + + GL CMP +SS V
Sbjct: 63 LTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSSAV 122
Query: 186 ALTHLAGGNSALALAMTIISNLLGIMI 212
LT GGN A A+ + + LGI+I
Sbjct: 123 ILTKAVGGNEAAAIFNSAFGSFLGIVI 149
>sp|Q5PT53|NTCP7_MOUSE Sodium/bile acid cotransporter 7 OS=Mus musculus GN=Slc10a7 PE=2
SV=1
Length = 340
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 73 LLKIAADNFLPLALIGGVAFGFANPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGE 128
LL+ A + + ++ + PS+G L + +S + IF SGL+L++ E
Sbjct: 3 LLERARKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEE 62
Query: 129 IGAAAEAWPVGIFGLFSILLFTPYFSKLILQ---VQLQPQEFVTGLALFSCMPTTLSSGV 185
+ +A + +F L F P L LQ V + + GL CMP +SS V
Sbjct: 63 LTSALVHLRLHLFIQIFTLAFFPAAIWLFLQLLSVTSINEWLLKGLQTVGCMPPPVSSAV 122
Query: 186 ALTHLAGGNSALALAMTIISNLLGIMI 212
LT GGN A A+ + + LGI++
Sbjct: 123 ILTKAVGGNEAAAIFNSAFGSFLGIVV 149
>sp|Q5PT50|NTCP7_RAT Sodium/bile acid cotransporter 7 OS=Rattus norvegicus GN=Slc10a7
PE=2 SV=1
Length = 340
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 90 VAFGFA--NPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGL 143
VA G A PS+G L + +S + IF SGL+L++ E+ +A + +F
Sbjct: 18 VAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQ 77
Query: 144 FSILLFTPYFSKLILQ---VQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALA 200
L F P L LQ V + + GL CMP +SS V LT GGN A A+
Sbjct: 78 VFTLAFFPTTIWLFLQLLSVTSINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIF 137
Query: 201 MTIISNLLGIMI 212
+ + LGI++
Sbjct: 138 NSAFGSFLGIVV 149
>sp|Q5ZJH8|NTCP7_CHICK Sodium/bile acid cotransporter 7 OS=Gallus gallus GN=SLC10A7 PE=2
SV=1
Length = 333
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 87 IGGVAFGFA----NPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPV 138
I G+A A P++G L + ++ + AIF SGL+L++ E+ +A +
Sbjct: 13 IAGIALVIAAARLEPAVGVKGGPLKPEITITYIAVSAIFFNSGLSLKTEELTSALMHVKL 72
Query: 139 GIFGLFSILLFTPYFSKLILQV-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNS 195
+F L+F P L LQ+ + P + + GL CMP +SS V LT GGN
Sbjct: 73 HLFVQIFTLVFFPTAIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNE 132
Query: 196 ALAL 199
A A+
Sbjct: 133 AAAI 136
>sp|Q6DHK8|NTCP7_DANRE Sodium/bile acid cotransporter 7 OS=Danio rerio GN=slc10a7 PE=2
SV=1
Length = 336
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 90 VAFGFANPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFS 145
+ F PS+G L + ++ + IF SGL+L++ E+ +A + F
Sbjct: 20 ITFAKLQPSVGVKGGPLHPEITITYVAVSVIFFNSGLSLKTEELASALMHVKLHFFVQTF 79
Query: 146 ILLFTPYFSKLILQV---QLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMT 202
L+F P L+L+V + + GL +CMP +SS V LT GGN A A+ +
Sbjct: 80 TLVFFPIAIWLLLKVLALTAINEWLLRGLQTVACMPPPVSSAVILTKAVGGNEAAAIFNS 139
Query: 203 IISNLLGIMIVSYL 216
+ LGI++ L
Sbjct: 140 AFGSFLGIVVTPLL 153
>sp|Q05131|YMS4_YEAST Uncharacterized membrane protein YMR034C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR034C PE=1
SV=1
Length = 434
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 170 GLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMI 212
GL L + PTT++S V +T AGGNS L + I NLLG I
Sbjct: 123 GLILTATCPTTVASNVIMTTNAGGNSLLCVCEVFIGNLLGAFI 165
>sp|Q1EBV7|BASS2_ARATH Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis
thaliana GN=BASS2 PE=2 SV=1
Length = 409
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 81/206 (39%), Gaps = 7/206 (3%)
Query: 16 KMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPSDQDFASS--KGLNWAKPL 73
K++S + R S SP S +A D S K L+ + +
Sbjct: 38 KLVSVSNSGISLRIQNSKPISPVFALEATSSRRVVCKAAAGVSGDLPESTPKELSQYEKI 97
Query: 74 LKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAA- 132
+++ F PL +I G G PSL + L + + GLTL +
Sbjct: 98 IELLTTLF-PLWVILGTLVGIFKPSLVTWLET-DLFTLGLGFLMLSMGLTLTFEDFRRCL 155
Query: 133 AEAWPVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAG 192
W VG+ G + + P LI TGL L SC P +S VA T+++
Sbjct: 156 RNPWTVGV-GFLAQYMIKPILGFLIAMTLKLSAPLATGLILVSCCPGGQASNVA-TYISK 213
Query: 193 GNSALALAMTIISNLLGIMIVSYLFK 218
GN AL++ MT S + I++ L K
Sbjct: 214 GNVALSVLMTTCSTIGAIIMTPLLTK 239
>sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporter YocS OS=Bacillus
subtilis (strain 168) GN=yocS PE=3 SV=1
Length = 321
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 92 FGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGA-AAEAWPV--GIFGLFSILL 148
GF+ PSL Y ++ F +F + GLTL++ + + W V G+ ++I+
Sbjct: 25 LGFSFPSLFTWISSY-ITIFLGIIMFGM-GLTLQADDFKELVRKPWQVIIGVIAQYTIMP 82
Query: 149 FTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLL 208
+ L + P E G+ L C P +S V +T LA GN+AL++A+T IS LL
Sbjct: 83 LVAFGLAFGLHL---PAEIAVGVILVGCCPGGTASNV-MTFLAKGNTALSVAVTTISTLL 138
>sp|Q5VRB2|BASS2_ORYSJ Probable sodium/metabolite cotransporter BASS2, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS2 PE=2 SV=1
Length = 419
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 136 WPVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNS 195
W VG+ G + L P I TGL L SC P +S VA T+++ GN
Sbjct: 168 WTVGV-GFLAQYLIKPMLGFAIAMTLKLSAPLATGLILVSCCPGGQASNVA-TYISKGNV 225
Query: 196 ALALAMTIISNLLGIMIVSYLFK 218
AL++ MT S + I++ L K
Sbjct: 226 ALSVLMTTCSTIGAIVMTPLLTK 248
>sp|P39879|Y2026_PSEAE Uncharacterized protein PA2026 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA2026
PE=4 SV=2
Length = 333
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 79 DNFLPLALIGGVAFGFANPSLGCLADKYQ-LSKFSTFAIFIVSGLTLRSGEIGAAAEAWP 137
DNF LALI V P G A ++ ++ +F + G L I A W
Sbjct: 9 DNF-TLALIATVLLATFLPCSGQTAVVFEWVTNIGIGLLFFLHGAKLSRQAIIAGMTHWR 67
Query: 138 VGIFGLFSILLFTPYFSKLILQVQLQPQ---EFVTGLALFSCMPTTLSSGVALTHLAGGN 194
+ + + P L L+ L P E G+ +P T+ S +A T LA GN
Sbjct: 68 LHLLVFACTFVMFPLLG-LALKPALSPMVTPELYLGILFLCALPATVQSSIAFTSLARGN 126
Query: 195 SALALAMTIISNLLGI 210
A+ +S+LLG+
Sbjct: 127 VPAAVCSASVSSLLGV 142
>sp|P39836|YFEH_ECOLI Uncharacterized protein YfeH OS=Escherichia coli (strain K12)
GN=yfeH PE=4 SV=2
Length = 332
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 116 IFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ---VQLQPQEFVTGLA 172
+F + G L I A W + ++ + S + P L V + P + +G
Sbjct: 45 LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLY-SGFL 103
Query: 173 LFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMI 212
+P T+ S +A T +AGGN A A+ S+LLGI +
Sbjct: 104 YLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFL 143
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,844,180
Number of Sequences: 539616
Number of extensions: 2995092
Number of successful extensions: 8186
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8162
Number of HSP's gapped (non-prelim): 26
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)