Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>027350
MAAEEEEEAKQLQQLLRLYIGMSFSLFLASLPKNSSQAKEELKARLRAAEEQLKQMKSRR
KEDSKANARVVEIFASHRNAWQAEEKRLLQQIDAATEEMASLRSKIDELEREKLESDKRV
QELEDMIGFMSRRGCEFEVEQQQQQHYHQHQEEEEEEFGVCESRECYGGANDGQIGNFGF
SSEFLASASKFWTERASSIWQDVQYESQYESLESIYHMKHFVAR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027350
        (224 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077207 - symbol:AT3G45900 "AT3G45900" species...   253  7.7e-28   2


>TAIR|locus:2077207 [details] [associations]
            symbol:AT3G45900 "AT3G45900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0015996 "chlorophyll catabolic process"
            evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:BT014753
            IPI:IPI00523346 RefSeq:NP_190176.2 UniGene:At.35977 IntAct:Q6IDC0
            PaxDb:Q6IDC0 PRIDE:Q6IDC0 EnsemblPlants:AT3G45900.1 GeneID:823733
            KEGG:ath:AT3G45900 TAIR:At3g45900 eggNOG:NOG253158
            HOGENOM:HOG000240564 InParanoid:Q6IDC0 OMA:HRATETR PhylomeDB:Q6IDC0
            ProtClustDB:CLSN2680890 Genevestigator:Q6IDC0 Uniprot:Q6IDC0
        Length = 389

 Score = 253 (94.1 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
 Identities = 62/127 (48%), Positives = 76/127 (59%)

Query:    19 YIGMSFSLFLASLPKNS-------SQXXXXXXXXXXXXXXQLKQMKSRRKEDSKANARVV 71
             ++ +SFS+ LA LP ++       +               Q++QMKSRR EDSKANARVV
Sbjct:    33 FLVLSFSVMLAHLPNDAISLVPRLTSQVTELKRRLATAEEQVRQMKSRRVEDSKANARVV 92

Query:    72 EIFASHRNAWQAEEKRLLQQIDAATEEMASLRSKIDELEREKLESDKRVQELEDMIGFMS 131
             EIFASHRNAWQ EEKRLL +I    EE     ++I ELERE       V E ++MIGFMS
Sbjct:    93 EIFASHRNAWQEEEKRLLNRIHEIEEEREDFMNRISELERE-------VSERDEMIGFMS 145

Query:   132 RRGCEFE 138
             RR  E E
Sbjct:   146 RREIEEE 152

 Score = 76 (31.8 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
 Identities = 14/17 (82%), Positives = 15/17 (88%)

Query:   208 QYESLESIYHMKHFVAR 224
             QYESLES+Y MKHFV R
Sbjct:   192 QYESLESVYRMKHFVPR 208


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.129   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      224       177   0.00084  109 3  11 22  0.41    32
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  158 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.36u 0.12s 22.48t   Elapsed:  00:00:01
  Total cpu time:  22.36u 0.12s 22.48t   Elapsed:  00:00:01
  Start:  Fri May 10 11:19:07 2013   End:  Fri May 10 11:19:08 2013

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