BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027350
         (224 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q2QL82|CTTB2_MICMU Cortactin-binding protein 2 OS=Microcebus murinus GN=CTTNBP2 PE=3
           SV=1
          Length = 1647

 Score = 40.8 bits (94), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 35  SSQAKEEL-KARLRAAEEQLKQMKSRRKEDSKANARVVEIFASHRNAWQAEEKRLLQQID 93
           S Q K E+ K +L+A E++ K++ +R +E+   N +VV +          +     Q+++
Sbjct: 134 SRQKKLEMEKLQLQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLE 193

Query: 94  AATEEMASLRSKIDELEREKLESDKRVQELEDMIGFMSRRGCEFEVEQQQ 143
            A  ++   + K +ELE E     +R  E+E     M ++  EF+ E++Q
Sbjct: 194 EAMAKLEEEKKKTNELEEELSAEKRRSTEMEAQ---MEKQLSEFDTEREQ 240


>sp|Q108T9|CTTB2_LOXAF Cortactin-binding protein 2 OS=Loxodonta africana GN=CTTNBP2 PE=3
           SV=1
          Length = 1661

 Score = 38.1 bits (87), Expect = 0.052,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 15/121 (12%)

Query: 35  SSQAKEEL-KARLRAAEEQLKQMKSRRKEDSKANARVVEIFASHRNAWQAEEKRLLQQID 93
           S Q K E+ K +L+A E++ K++ +R +E+   N  VV +            K   Q   
Sbjct: 138 SRQKKLEMEKLQLQALEQEHKKLAARLEEERGKNKHVVLMLV----------KECKQLSG 187

Query: 94  AATEEMASLRSKIDELEREKLESDKRVQELEDMIGFMSRRGCEFEVEQQQQQHYHQHQEE 153
              EE   +   + +LE EK    KR  ELE+ +    RR  E E + ++Q      + E
Sbjct: 188 KVIEEAQKVEEVMAQLEEEK----KRTNELEEELSTEKRRSTEMEAQMEKQLSEFDTERE 243

Query: 154 E 154
           +
Sbjct: 244 Q 244


>sp|Q5SPX1|CC157_MOUSE Coiled-coil domain-containing protein 157 OS=Mus musculus
           GN=Ccdc157 PE=2 SV=1
          Length = 718

 Score = 35.4 bits (80), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 44  ARLRAAEEQLKQMKSRRKEDSKANARVVEIFASHRNAWQAEEKRLLQQIDAATEEMASLR 103
            RL  A +Q++   +   E  K  ARV +    H+ + QA+++ LLQQ+D   +E   LR
Sbjct: 414 GRLDGASQQIRWAST---ELDKEKARV-DSMVRHQESLQAKQRTLLQQLDCLDQEREELR 469

Query: 104 SKIDELEREKLESDKRVQELE 124
             +DE E ++ E ++++Q L+
Sbjct: 470 GSLDEAEAQRSELEEQLQSLQ 490


>sp|A4IFI1|CC157_BOVIN Coiled-coil domain-containing protein 157 OS=Bos taurus GN=CCDC157
           PE=2 SV=2
          Length = 688

 Score = 33.9 bits (76), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 4/85 (4%)

Query: 40  EELKARLRAAEEQLKQMKSRRKEDSKANARVVEIFASHRNAWQAEEKRLLQQIDAATEEM 99
           E L  RL  A +Q++   +   E  K  ARV +    H+ + QA+++ LLQQ+D+  +E 
Sbjct: 403 ELLAGRLDGASQQIRWAST---ELDKEKARV-DSMVRHQESLQAKQRALLQQLDSLDQER 458

Query: 100 ASLRSKIDELEREKLESDKRVQELE 124
             LR  +DE E ++   ++++Q ++
Sbjct: 459 EELRGSLDEAEAQRAHVEEQLQSVQ 483


>sp|A2BGD5|CACO1_DANRE Calcium-binding and coiled-coil domain-containing protein 1
           OS=Danio rerio GN=calcoco1 PE=2 SV=1
          Length = 640

 Score = 32.0 bits (71), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 35/121 (28%)

Query: 41  ELKARLRAAEEQLKQMKSRRKEDSKANARVVEIFASHRNAWQAEEKRLLQQIDAATEEMA 100
           EL   L AA++ +++ K RR+ D              R +W+   K L ++ID   EE+ 
Sbjct: 158 ELLQALEAADQNVEREKGRRERD--------------RGSWEHTRKELERKIDDLKEEVR 203

Query: 101 SLRSKIDELEREKLE---------------------SDKRVQELEDMIGFMSRRGCEFEV 139
             R K++++++++ E                     +++R++ELE+ I  +++RG E E 
Sbjct: 204 EYREKVEDMKKKQKEVEDLGEALTEEKRALLAQKEANEQRIRELEEDIKILTQRGLERET 263

Query: 140 E 140
           +
Sbjct: 264 D 264


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.125    0.343 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,523,825
Number of Sequences: 539616
Number of extensions: 2924621
Number of successful extensions: 37105
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 1497
Number of HSP's that attempted gapping in prelim test: 29740
Number of HSP's gapped (non-prelim): 6511
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)