Query 027351
Match_columns 224
No_of_seqs 117 out of 675
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 08:39:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027351.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027351hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03396 PC_PLC phospholipase 100.0 7.4E-54 1.6E-58 417.9 13.3 168 9-215 38-233 (690)
2 COG3511 PlcC Phospholipase C [ 100.0 1.3E-47 2.8E-52 358.0 11.8 174 6-217 39-238 (527)
3 PF04185 Phosphoesterase: Phos 100.0 9.5E-48 2.1E-52 354.3 6.2 194 15-221 1-204 (376)
4 TIGR03397 acid_phos_Burk acid 100.0 2.9E-46 6.3E-51 352.1 12.3 128 15-179 1-171 (483)
5 TIGR03417 chol_sulfatase choli 92.2 0.21 4.5E-06 48.0 4.9 76 131-210 14-95 (500)
6 PRK13759 arylsulfatase; Provis 85.7 0.91 2E-05 43.5 3.9 74 132-209 19-98 (485)
7 TIGR02335 hydr_PhnA phosphonoa 83.0 1.6 3.4E-05 41.3 4.1 72 141-213 35-119 (408)
8 PF00884 Sulfatase: Sulfatase; 74.0 4.3 9.3E-05 34.8 3.9 79 134-213 15-99 (308)
9 COG3119 AslA Arylsulfatase A a 72.0 7.7 0.00017 37.1 5.4 76 132-208 17-101 (475)
10 KOG2645 Type I phosphodiestera 52.1 7 0.00015 37.3 1.1 49 137-185 37-88 (418)
11 PRK10649 hypothetical protein; 22.5 81 0.0018 31.2 3.1 72 134-213 251-327 (577)
12 PF01663 Phosphodiest: Type I 20.1 56 0.0012 28.8 1.4 73 141-213 19-108 (365)
No 1
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=100.00 E-value=7.4e-54 Score=417.86 Aligned_cols=168 Identities=26% Similarity=0.423 Sum_probs=140.2
Q ss_pred CCCCCCccEEEEEEEecccchhcccccccCCCCCCCCCCCCCCCCCCCCCCCCceeecCCC--ccc--------------
Q 027351 9 SQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKS--VYV-------------- 72 (224)
Q Consensus 9 ~~~~~~IkHVVVlm~ENRSFDhyfG~l~~~~~~~~Gl~g~~~nP~~~~~p~~~~v~~~~~~--~~~-------------- 72 (224)
...+++|||||||||||||||||||+|+ |+||+. ||..+..|+|.+|+.|+.. ..+
T Consensus 38 tgt~~dv~HVVilmqENRSFDHyfGtl~-------GvrGf~-d~~~~~~~~g~~v~~q~~~~~~~~~Pf~ld~~~~~~~~ 109 (690)
T TIGR03396 38 TGTIQDVEHVVILMQENRSFDHYFGTLR-------GVRGFG-DRRPIPLPDGKPVWYQPNAKGETVAPFHLDTSKTNAQR 109 (690)
T ss_pred CCccccccEEEEEEeeccchhhhcccCc-------CccCCC-CCccccCCCCCCceecCCCCCceeCCcccCCcCcCccc
Confidence 3479999999999999999999999999 999998 8888888888888887542 111
Q ss_pred CCCCCCchHHHHHHhhCCCccccccccCCCCCCccccccCCCCCCchhHhhhhhcCCCcccccccccCCCchHHHHHHHH
Q 027351 73 DPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAE 152 (224)
Q Consensus 73 ~~Dp~h~~~~~~~qi~G~~~~~~~~~~~~~~~~~~~~~~~~g~mdgfv~~~~~~~~~~~~~vMgyy~~~~lp~~~~lA~~ 152 (224)
..|+.|+|.+.+.+ +|+|+||+|+.. ++.++||||++++||++|+||++
T Consensus 110 ~~~~~H~w~~~~~a------------------------wn~G~~d~w~~~-------k~~~tMgYy~r~dlPf~~aLAda 158 (690)
T TIGR03396 110 VGGTPHSWSDAHAA------------------------WNNGRMDRWPAA-------KGPLTMGYYKREDIPFQYALADA 158 (690)
T ss_pred CCCCCCCcHHHHHH------------------------HHCCCccccccc-------CCCceeeccCccccHHHHHHHHH
Confidence 12455666665555 589999999974 46789999999999999999999
Q ss_pred HhhcccccCCCCCCCchhhhhhhhccCCCCC-------CCCCCC-----cCCCCCCCCHHHHHHhCCCcEEEeec
Q 027351 153 FGVCDRWFASVPASTQPNRLYVHSATSHGAT-------SNDTEK-----LIEGFPQKTIFESLDESGLSFGIYYQ 215 (224)
Q Consensus 153 ftv~D~~f~s~~g~T~PNR~~l~sgts~G~~-------~n~~~~-----~~~~~~~~Ti~e~L~~~gisW~~Y~~ 215 (224)
|||||+||||++|+|+|||+|+|||++++.+ .|+... ....++|+||+|+|+++|||||+||+
T Consensus 159 FTvcD~yf~S~~g~T~PNR~~~~sGt~~~~~~~~~~~~~n~~~~~~~~~~~~~~~w~Ti~e~L~~aGVSWkvYq~ 233 (690)
T TIGR03396 159 FTICDAYHCSVQGGTNPNRLYLWTGTNGPLGGAGGPAVTNDDDWPGIGPGEGGYTWTTYPERLEQAGVSWKVYQD 233 (690)
T ss_pred hhhhhhhcccCCCCCCcCceeeEecccCCcccCCcceecCCccccccccccCCCCcCcHHHHHHhCCCcEEEEec
Confidence 9999999999999999999999999998753 222110 12468899999999999999999976
No 2
>COG3511 PlcC Phospholipase C [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.3e-47 Score=358.00 Aligned_cols=174 Identities=25% Similarity=0.377 Sum_probs=137.0
Q ss_pred ccCCCCCCCccEEEEEEEecccchhcccccccCCCCCCCCCCCC-CCCCCCCCCCCCceeec------------CCC---
Q 027351 6 TSSSQYPYPIKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSE-SNPISTSDPNSPLIYFG------------DKS--- 69 (224)
Q Consensus 6 ~~~~~~~~~IkHVVVlm~ENRSFDhyfG~l~~~~~~~~Gl~g~~-~nP~~~~~p~~~~v~~~------------~~~--- 69 (224)
.-.....++|||||||||||||||||||+|+ |++|+. .+|..+.++.|..++.| .+.
T Consensus 39 ~~~~g~~~dIeHVVilmqENRsFDhyFGtl~-------g~~Gf~~~~~~~l~~~~G~~~~tQa~~~~~~~~Pf~~dt~~g 111 (527)
T COG3511 39 DPCAGTLTDIEHVVILMQENRSFDHYFGTLP-------GVRGFDDANPTSLFDQDGSNLVTQALTPGGVNAPFRPDTPRG 111 (527)
T ss_pred ccccCCCCcceEEEEEEeccccchhhccccc-------CccCCCCCCcccccccCCCceeEecccCCccccccccCCCCC
Confidence 3345578899999999999999999999999 777776 34433444445444333 121
Q ss_pred ----cccCCCCCCchHHHHHHhhCCCccccccccCCCCCCccccccCCCCCCchhHhhhhhcCCCcccccccccCCCchH
Q 027351 70 ----VYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPV 145 (224)
Q Consensus 70 ----~~~~~Dp~h~~~~~~~qi~G~~~~~~~~~~~~~~~~~~~~~~~~g~mdgfv~~~~~~~~~~~~~vMgyy~~~~lp~ 145 (224)
.....||.|+|.+.++++ |+|+||||+.. +....||||++.++|+
T Consensus 112 ~~~~~~~v~D~~H~W~~~h~~w------------------------NgG~nD~w~~~-------~~~~sMgYy~rqdip~ 160 (527)
T COG3511 112 PNGYSVCVRDPPHRWYDNHMAW------------------------NGGANDGWVPA-------QDPGSMGYYDRQDIPI 160 (527)
T ss_pred ccccceEecCCCcchhhhhhhh------------------------hCCccCCcccc-------cCcccccccccccchH
Confidence 122358999999999985 79999999975 3455699999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCchhhhhhhhccCCCCCCCCCC----Cc--CCCCCCCCHHHHHHhCCCcEEEeecCC
Q 027351 146 YKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTE----KL--IEGFPQKTIFESLDESGLSFGIYYQYP 217 (224)
Q Consensus 146 ~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts~G~~~n~~~----~~--~~~~~~~Ti~e~L~~~gisW~~Y~~~~ 217 (224)
+|+||++|||||+||||++|+|.|||+||+||+++..+.+... +. ...++|.|++|+|+++|||||+|+.-.
T Consensus 161 ~~alAd~ftLcD~Yf~s~~GgT~pNRly~~ta~~~P~g~~gdp~~~~p~~~~~~~~w~~~pe~L~~agvSWkvyq~~~ 238 (527)
T COG3511 161 HWALADAFTLCDAYFCSLLGGTFPNRLYLITACADPDGADGDPSIVNPSISPQTYDWSTYPERLQDAGVSWKVYQDKL 238 (527)
T ss_pred HHHhhhhheehhhhcccccCCCCcceeeeEEeeccCCCCCCCccccCCccCcccccccccHhhHhhcCCCcceeeccc
Confidence 9999999999999999999999999999999999655433221 11 147889999999999999999997533
No 3
>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3.1.4.3 from EC) and eukaryotic acid phosphatases 3.1.3.2 from EC.; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 2D1G_B.
Probab=100.00 E-value=9.5e-48 Score=354.31 Aligned_cols=194 Identities=34% Similarity=0.527 Sum_probs=94.8
Q ss_pred ccEEEEEEEecccchhcccccccCCCCCCCCCCCCCCCCCCCCCCCCceeecCCCcccCCCCCCchHHHHHHhhCCCcc-
Q 027351 15 IKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSESNPISTSDPNSPLIYFGDKSVYVDPDPGHSIQAIFEQVFGLTWA- 93 (224)
Q Consensus 15 IkHVVVlm~ENRSFDhyfG~l~~~~~~~~Gl~g~~~nP~~~~~p~~~~v~~~~~~~~~~~Dp~h~~~~~~~qi~G~~~~- 93 (224)
|||||||||||||||||||||+++++ +++ +. +|.....+.+..++.+.. ..++|+|++.....+.++....
T Consensus 1 IkHVVvlm~ENRSFD~~fG~~~~~~g-~~~---~~-d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~pf~~~~~~ 72 (376)
T PF04185_consen 1 IKHVVVLMQENRSFDHYFGTLPGVRG-IDG---FG-DPNSIPVPNGKPVPYQNY---APPDPGHSFPDGPNQPFRLDTAG 72 (376)
T ss_dssp --EEEEEEE-S--HHHHHTTTT-----TTS---------------------TT--------S---HHHHHS-S---SSS-
T ss_pred CcEEEEEEEecCccccceeeCCCCCC-CCc---cc-cccccccccCCCccCCcc---cCCCCccCCCCcccCCcccCCCC
Confidence 89999999999999999999994433 222 21 233222222222222111 1234445554444444432110
Q ss_pred ---ccccccCCCCCCcc---ccccCCCCCCchhHhhhhhcCCCcccccccccCCCchHHHHHHHHHhhcccccCCCCCCC
Q 027351 94 ---QYTSLSSSSSSNNE---ELHVLRPNMQGFAQNAESTQKGMAASVMNGFKPDMVPVYKELVAEFGVCDRWFASVPAST 167 (224)
Q Consensus 94 ---~~~~~~~~~~~~~~---~~~~~~g~mdgfv~~~~~~~~~~~~~vMgyy~~~~lp~~~~lA~~ftv~D~~f~s~~g~T 167 (224)
...+.|.......| ...+++|+||+|+... ..+.++||||+++++|+|++||++|||||+||||++++|
T Consensus 73 ~~~~~~~~~~~~~~h~~~~~~~~~~~G~~d~~~~~~-----~~~~~~M~~y~~~~~P~~~~LA~~f~l~Dnyf~s~~~pS 147 (376)
T PF04185_consen 73 GDPVMNGFCTPDPNHSWYAMQQAWNGGKMDGFVSPA-----DSGGQVMGYYTPADLPFLWALADQFTLCDNYFCSVPGPS 147 (376)
T ss_dssp -EE--TTS--------HHHHHHHHGGGT---HHHHH-----HHTTGGGEE--TTTSHHHHHHHHHSEEESSEE-SSSS-H
T ss_pred CCCccCceeeeCCCCCcHHHHHHHhCCccccccccc-----CCCCccceeeCCCCChHHHHHHhheEEecccccCCCCCC
Confidence 01111111111111 1235789999997432 246889999999999999999999999999999999999
Q ss_pred chhhhhhhhccCCCCCCCCCCCcC---CCCCCCCHHHHHHhCCCcEEEeecCCCCcc
Q 027351 168 QPNRLYVHSATSHGATSNDTEKLI---EGFPQKTIFESLDESGLSFGIYYQYPPATL 221 (224)
Q Consensus 168 ~PNR~~l~sgts~G~~~n~~~~~~---~~~~~~Ti~e~L~~~gisW~~Y~~~~p~~~ 221 (224)
+|||+|++||++.|.+.+...... ..++|+||+|+|+++|||||+|+++++...
T Consensus 148 ~PNr~~l~sG~~~~~~~~~~~~~~~~~~~~~~~ti~d~L~~aGisW~~Y~e~~~~~~ 204 (376)
T PF04185_consen 148 QPNRLYLISGTSDGVGNNGNPFIDNPSPPFSWPTIFDRLSAAGISWKWYQEGYPNPG 204 (376)
T ss_dssp HHHHHHHHHS---TT-STS-TTS-EEES------HHHHHHHHT--EEEEETT-S-SE
T ss_pred CCCceEEEeeccCccccCCCCceecCCCCcccccHHHHHHHcCCceEeCeecCCccC
Confidence 999999999999887664433222 468899999999999999999999877554
No 4
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type. A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.
Probab=100.00 E-value=2.9e-46 Score=352.08 Aligned_cols=128 Identities=26% Similarity=0.347 Sum_probs=99.3
Q ss_pred ccEEEEEEEecccchhcccccccCCCCCCCCCCCCC---------CCCCCCCCCCCcee---------------------
Q 027351 15 IKTIVVLVQENRSFDHMIGWMKSLNPELDGVTGSES---------NPISTSDPNSPLIY--------------------- 64 (224)
Q Consensus 15 IkHVVVlm~ENRSFDhyfG~l~~~~~~~~Gl~g~~~---------nP~~~~~p~~~~v~--------------------- 64 (224)
|||||||||||||||||||+|++ +||+.. ++..+..|.+.+|+
T Consensus 1 v~hvVvi~~ENRsFd~~fG~~~g-------v~g~~~~~~~~~~q~~~~~~~l~~~~~v~~~~~~~g~~~~~~q~~~~~~~ 73 (483)
T TIGR03397 1 VKNVVVIYAENRSFDNLYGNFPG-------ANGLSNASPESKAQRDRDGTPLPTLPPIWGGLTVGGVTPPVEEAFTENLP 73 (483)
T ss_pred CceEEEEEeeccccccccccCCC-------cCCCCCcchhhhcccCCCCcccCCCCccccccccccccccccccccCCCc
Confidence 89999999999999999999994 444431 12222112222222
Q ss_pred ---ecCCC--------cccCCCCCCchHHHHHHhhCCCccccccccCCCCCCccccccCCCCCCchhHhhhhhcCCCccc
Q 027351 65 ---FGDKS--------VYVDPDPGHSIQAIFEQVFGLTWAQYTSLSSSSSSNNEELHVLRPNMQGFAQNAESTQKGMAAS 133 (224)
Q Consensus 65 ---~~~~~--------~~~~~Dp~h~~~~~~~qi~G~~~~~~~~~~~~~~~~~~~~~~~~g~mdgfv~~~~~~~~~~~~~ 133 (224)
|+-+. ...+.|+.|.|...++|| |+|+||+|++.. +.++.
T Consensus 74 ~~Pf~~~~~~~~~~~~~~~~~d~~H~~~~~q~~~------------------------ngG~~d~~~~~~-----~~g~~ 124 (483)
T TIGR03397 74 NAPFALDDPNGENLPLSVVTRDLWHRFYQNQMQI------------------------NGGRNDKFAAWA-----DSGAL 124 (483)
T ss_pred CCCccccCcCCccCcCccccCCCCCChHHHHHHH------------------------hCCCcccccccc-----cCCCc
Confidence 22111 123458999999999996 689999999653 23688
Q ss_pred ccccc--cCCCchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccC
Q 027351 134 VMNGF--KPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATS 179 (224)
Q Consensus 134 vMgyy--~~~~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts 179 (224)
+|||| ++++||+ |+||++|||||+||||++|+|+|||+|||||++
T Consensus 125 ~MGyy~~~~~dlp~-~~LA~~fTlcD~y~~s~~ggt~~N~~~l~s~~~ 171 (483)
T TIGR03397 125 VMGYYAQDASKLPM-WKLAQQYTLADNFFMGAFGGSFLNHQYLICACA 171 (483)
T ss_pred eeeeecCCcccCcH-HHHhhhhhhhhhhhccccCCCcchhhheeeccc
Confidence 99999 9999998 899999999999999999999999999999976
No 5
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=92.23 E-value=0.21 Score=48.03 Aligned_cols=76 Identities=24% Similarity=0.272 Sum_probs=57.8
Q ss_pred cccccccccC---CCchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccCC---CCCCCCCCCcCCCCCCCCHHHHHH
Q 027351 131 AASVMNGFKP---DMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSH---GATSNDTEKLIEGFPQKTIFESLD 204 (224)
Q Consensus 131 ~~~vMgyy~~---~~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts~---G~~~n~~~~~~~~~~~~Ti~e~L~ 204 (224)
....||+|.. -..|.|-+||++=+++++.||..| .+.|-|.-++||.-. |...+... + .-..+||.+.|.
T Consensus 14 r~d~lg~~G~~~~~~TPnLD~LA~eGv~F~nay~~~p-~C~PSRaSllTG~yp~~~G~~~~~~~-l--~~~~~tl~~~L~ 89 (500)
T TIGR03417 14 NGTLLPDYGPARWLHAPNLKRLAARSVVFDNAYCASP-LCAPSRASFMSGQLPSRTGAYDNAAE-F--PSDIPTYAHYLR 89 (500)
T ss_pred CccccccCCCCCcCCCCcHHHHHHhCceecccccCCC-ccHHHHHHHHHCCCHHhcCcccchhh-c--CcCCCCHHHHHH
Confidence 3456788853 489999999999999999999988 889999999999853 32222211 1 112589999999
Q ss_pred hCCCcE
Q 027351 205 ESGLSF 210 (224)
Q Consensus 205 ~~gisW 210 (224)
++|..=
T Consensus 90 ~aGY~T 95 (500)
T TIGR03417 90 RAGYRT 95 (500)
T ss_pred HCCCeE
Confidence 999743
No 6
>PRK13759 arylsulfatase; Provisional
Probab=85.73 E-value=0.91 Score=43.49 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=54.7
Q ss_pred cccccccc--CCCchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccCCC---CCCCCCCCcCCCC-CCCCHHHHHHh
Q 027351 132 ASVMNGFK--PDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHG---ATSNDTEKLIEGF-PQKTIFESLDE 205 (224)
Q Consensus 132 ~~vMgyy~--~~~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts~G---~~~n~~~~~~~~~-~~~Ti~e~L~~ 205 (224)
...||+|. ....|.|-+||++=+++++.||..+ .+.|.|.-++||.-.. ...+... . .. ...|+++.|.+
T Consensus 19 ~d~l~~~G~~~~~TPnld~La~~G~~F~nay~~~p-~c~psr~sl~TG~yp~~~g~~~~~~~-~--~~~~~~tl~~~l~~ 94 (485)
T PRK13759 19 GDCLGCNGNKAVETPNLDMLASEGYNFENAYSAVP-SCTPARAALLTGLSQWHHGRVGYGDV-V--PWNYKNTLPQEFRD 94 (485)
T ss_pred HHHHHhcCCCcCCCccHHHHHhcCceeeceecCCC-cchhhHHHHHhcCChhhcCccccccc-c--cccccchHHHHHHH
Confidence 34577775 3579999999999999999999886 4569999999998743 2222111 0 11 24799999999
Q ss_pred CCCc
Q 027351 206 SGLS 209 (224)
Q Consensus 206 ~gis 209 (224)
+|..
T Consensus 95 ~GY~ 98 (485)
T PRK13759 95 AGYY 98 (485)
T ss_pred cCCe
Confidence 9985
No 7
>TIGR02335 hydr_PhnA phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.
Probab=82.96 E-value=1.6 Score=41.32 Aligned_cols=72 Identities=19% Similarity=0.196 Sum_probs=52.7
Q ss_pred CCchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccCCC---CCCCCC-----CCc-----CCCCCCCCHHHHHHhCC
Q 027351 141 DMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSHG---ATSNDT-----EKL-----IEGFPQKTIFESLDESG 207 (224)
Q Consensus 141 ~~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts~G---~~~n~~-----~~~-----~~~~~~~Ti~e~L~~~g 207 (224)
..+|+|..|+++-+.+. .-+..|+-|.||+.-++||...+ ..+|.. ... ....+.+||||.+.++|
T Consensus 35 g~~P~L~~l~~~G~~~~-~~s~~Ps~T~p~~tSi~TG~~P~~HGI~gn~~~dp~~~~~~~~~~~~~~~~pTi~e~a~~aG 113 (408)
T TIGR02335 35 GVAPFIAELTGFGTVLT-ADCVVPSFTNPNNLSIVTGAPPAVHGICGNYYLDQDTGEEIMMTDAKYLRAPTILGEMSKAG 113 (408)
T ss_pred CCCchHHHHHhcCceee-ccCCCCCcccccceeeecCCChhhCceecceEEecCCCceEEEeChhhhCCchHHHHHHHcC
Confidence 47999999999866554 46889999999999999999854 333321 000 11134689999999999
Q ss_pred CcEEEe
Q 027351 208 LSFGIY 213 (224)
Q Consensus 208 isW~~Y 213 (224)
++=.++
T Consensus 114 ~~ta~v 119 (408)
T TIGR02335 114 VLTAVV 119 (408)
T ss_pred CeEEEE
Confidence 877665
No 8
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3.1.6. from EC are enzymes that hydrolyze various sulphate esters. The sequence of different types of sulphatases are available and have shown to be structurally related [, , ]; these include: arylsulphatase A 3.1.6.8 from EC (ASA), a lysosomal enzyme which hydrolyses cerebroside sulphate; arylsulphatase B 3.1.6.12 from EC (ASB), which hydrolyses the sulphate ester group from N-acetylgalactosamine 4-sulphate residues of dermatan sulphate; arylsulphatase C (ASD) and E (ASE); steryl-sulphatase 3.1.6.2 from EC (STS), a membrane bound microsomal enzyme which hydrolyses 3-beta-hydroxy steroid sulphates; iduronate 2-sulphatase precursor 3.1.6.13 from EC (IDS), a lysosomal enzyme that hydrolyses the 2-sulphate groups from non-reducing-terminal iduronic acid residues in dermatan sulphate and heparan sulphate; N-acetylgalactosamine-6-sulphatase 3.1.6.4 from EC, which hydrolyses the 6-sulphate groups of the N-acetyl-d-galactosamine 6-sulphate units of chondroitin sulphate and the D-galactose 6-sulphate units of keratan sulphate; glucosamine-6-sulphatase 3.1.6.14 from EC (G6S), which hydrolyses the N-acetyl-D-glucosamine 6-sulphate units of heparan sulphate and keratan sulphate; N-sulphoglucosamine sulphohydrolase 3.10.1.1 from EC (sulphamidase), the lysosomal enzyme that catalyses the hydrolysis of N-sulpho-d-glucosamine into glucosamine and sulphate; sea urchin embryo arylsulphatase 3.1.6.1 from EC; green algae arylsulphatase 3.1.6.1 from EC, which plays an important role in the mineralisation of sulphates; and arylsulphatase 3.1.6.1 from EC from Escherichia coli (aslA), Klebsiella aerogenes (gene atsA) and Pseudomonas aeruginosa (gene atsA). ; GO: 0008484 sulfuric ester hydrolase activity, 0008152 metabolic process; PDB: 1P49_A 1FSU_A 2QZU_A 2W5Q_A 2W5T_A 2W5S_A 2W5R_A 3LXQ_A 1HDH_B 1E33_P ....
Probab=74.01 E-value=4.3 Score=34.76 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=50.0
Q ss_pred cccccc--CCCchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccCC---CCCCCCCCC-cCCCCCCCCHHHHHHhCC
Q 027351 134 VMNGFK--PDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSH---GATSNDTEK-LIEGFPQKTIFESLDESG 207 (224)
Q Consensus 134 vMgyy~--~~~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts~---G~~~n~~~~-~~~~~~~~Ti~e~L~~~g 207 (224)
.+++|. ...+|.|..||++.++++++|++. +.|.|-+.-++||... |...+.... ........++++.|.++|
T Consensus 15 ~~~~~~~~~~~tP~l~~l~~~g~~f~~~~s~~-~~T~~s~~~~ltG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 93 (308)
T PF00884_consen 15 DLSCYGYPIPTTPNLDRLAENGLRFSNAYSSG-PWTSPSRFSMLTGLYPHNSGVYSNGPYQQFNLPSKFPSLPDLLKKAG 93 (308)
T ss_dssp SSGGGTSSSSSSHHHHHHHHTSEEESSEE-SS-SSHHHHHHHHHHSS-HHHHT-SSSCSTTTCSSTTTS--HHHHHHHTT
T ss_pred CCCCCCCCcccCHHHHHhhhccEEEEEEEecc-CccccchhhhcccccccccccccccccccccccccccccHHHHhhcc
Confidence 345543 345999999999999999999554 4899999999999863 221121110 111223689999999999
Q ss_pred CcEEEe
Q 027351 208 LSFGIY 213 (224)
Q Consensus 208 isW~~Y 213 (224)
..=..+
T Consensus 94 Y~t~~~ 99 (308)
T PF00884_consen 94 YRTSFF 99 (308)
T ss_dssp -EEEEE
T ss_pred ccccee
Confidence 765433
No 9
>COG3119 AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]
Probab=71.99 E-value=7.7 Score=37.15 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=54.7
Q ss_pred ccccccccCC---CchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccCC---CCCCCCC-CCcCCCC--CCCCHHHH
Q 027351 132 ASVMNGFKPD---MVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATSH---GATSNDT-EKLIEGF--PQKTIFES 202 (224)
Q Consensus 132 ~~vMgyy~~~---~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts~---G~~~n~~-~~~~~~~--~~~Ti~e~ 202 (224)
...+++|... ..|.+-.||++=+++.++|+..+ .+-|=|..++||+.. |...+.. ......+ .-+|++|.
T Consensus 17 ~~~l~~~g~~~~~~tp~~d~LA~~Gv~f~n~y~~~~-~c~PsRa~l~TGr~~~~~G~~~~~~~~g~~~~l~~~~~Tla~~ 95 (475)
T COG3119 17 YGDLGAYGGPVVGPTPNIDRLAAEGVRFTNAYTTSP-CCGPSRAALLTGRYPFRTGVGGNAEPPGYPGGLPDEVPTLAEL 95 (475)
T ss_pred CCCCCcCCCccccCCCCHHHHHhcCceeeccccCcC-CCchhhhHHhhCCCccccccccccCCCCcccccCcccchHHHH
Confidence 3345666554 46888899999999999998876 566999999999974 4444432 1111122 25899999
Q ss_pred HHhCCC
Q 027351 203 LDESGL 208 (224)
Q Consensus 203 L~~~gi 208 (224)
|.++|.
T Consensus 96 Lk~~GY 101 (475)
T COG3119 96 LKEAGY 101 (475)
T ss_pred HHHcCC
Confidence 999997
No 10
>KOG2645 consensus Type I phosphodiesterase/nucleotide pyrophosphatase [General function prediction only]
Probab=52.09 E-value=7 Score=37.32 Aligned_cols=49 Identities=20% Similarity=0.186 Sum_probs=42.8
Q ss_pred cccCCCchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhcc---CCCCCCC
Q 027351 137 GFKPDMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSAT---SHGATSN 185 (224)
Q Consensus 137 yy~~~~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgt---s~G~~~n 185 (224)
|..+..+|.+..||+.-+-.++..-+-|+-|+|||.-++||. ++|.++|
T Consensus 37 yl~~~~~p~i~~l~~~gv~~~~~~pvFpT~TfPNhySivTGlype~HGIv~N 88 (418)
T KOG2645|consen 37 YLYKVLTPNIHKLASCGVWVTYVIPVFPTKTFPNHYSIVTGLYPESHGIVGN 88 (418)
T ss_pred hccCccCccHHHHHhccccccEEEecCcccccCCcceeeecccchhceeece
Confidence 444588999999999999999999999999999999999998 4665544
No 11
>PRK10649 hypothetical protein; Provisional
Probab=22.51 E-value=81 Score=31.24 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=47.5
Q ss_pred cccc--ccCCCchHHHHHHH---HHhhcccccCCCCCCCchhhhhhhhccCCCCCCCCCCCcCCCCCCCCHHHHHHhCCC
Q 027351 134 VMNG--FKPDMVPVYKELVA---EFGVCDRWFASVPASTQPNRLYVHSATSHGATSNDTEKLIEGFPQKTIFESLDESGL 208 (224)
Q Consensus 134 vMgy--y~~~~lp~~~~lA~---~ftv~D~~f~s~~g~T~PNR~~l~sgts~G~~~n~~~~~~~~~~~~Ti~e~L~~~gi 208 (224)
.|+. |.++..|.+-+||+ +-+++++++++.+ .|.|=+-.+.|-... .+ +. ......+|.+.|.++|+
T Consensus 251 ~~slyGY~r~TTP~Ld~l~~~~~~~~~F~n~~S~~~-~T~~Sl~~~LS~~~~---~~-~~---~~~~~~~l~~llk~aGY 322 (577)
T PRK10649 251 RMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRP-YTIEILQQALTFADE---KN-PD---LYLTQPSLMNMMKQAGY 322 (577)
T ss_pred hccccCCCCCCChhHHhhhccCCCeEEeCceecCCc-CHHHHHHHHccCCcc---cc-hh---hhccCCCHHHHHHHCCC
Confidence 3544 46789999999998 8899999999775 366665555542111 01 00 11235789999999999
Q ss_pred cEEEe
Q 027351 209 SFGIY 213 (224)
Q Consensus 209 sW~~Y 213 (224)
.=-+.
T Consensus 323 ~T~wi 327 (577)
T PRK10649 323 KTFWI 327 (577)
T ss_pred eEEEE
Confidence 54333
No 12
>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase). These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....
Probab=20.05 E-value=56 Score=28.79 Aligned_cols=73 Identities=25% Similarity=0.324 Sum_probs=52.8
Q ss_pred CCchHHHHHHHHHhhcccccCCCCCCCchhhhhhhhccC---CCCCCCC-----CCC---c------CCCCCCCCHHHHH
Q 027351 141 DMVPVYKELVAEFGVCDRWFASVPASTQPNRLYVHSATS---HGATSND-----TEK---L------IEGFPQKTIFESL 203 (224)
Q Consensus 141 ~~lp~~~~lA~~ftv~D~~f~s~~g~T~PNR~~l~sgts---~G~~~n~-----~~~---~------~~~~~~~Ti~e~L 203 (224)
..+|+|..|+++=+.+.+..+..|.-|.||..-++||.. +|..++. ... . ...+.-++|++.+
T Consensus 19 ~~~p~l~~l~~~G~~~~~~~s~~Ps~T~~~~~si~TG~~P~~HGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 98 (365)
T PF01663_consen 19 GNLPNLKRLAEEGVYGPNLRSVFPSTTAPNWASILTGAYPEEHGIIGNYWYDPKTGKESTFWDELGDSGDVDSPPIWESL 98 (365)
T ss_dssp TSSHHHHHHHHHSEEECEEE-SSSBSHHHHHHHHHHSS-HHHHS--SSCEEETTTTEEECEESSSSGGGCCCCHEHHHHH
T ss_pred ccCHHHHHHHHCCCCCCCceecCCCCcccchhhhhcCccccccCCccccccCccccccccccccccccccccchhHHHHH
Confidence 899999999999999999999999999999999999986 4554432 110 0 0112235999999
Q ss_pred HhCCCcEEEe
Q 027351 204 DESGLSFGIY 213 (224)
Q Consensus 204 ~~~gisW~~Y 213 (224)
.++|.+=.++
T Consensus 99 ~~~g~~~a~~ 108 (365)
T PF01663_consen 99 AKAGKKVAVF 108 (365)
T ss_dssp HHTT-EEEEC
T ss_pred HHcCCceeee
Confidence 9999876655
Done!