BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027352
MASIFSQIESPDGSMRDFIIKALDKLTVEQGMPPSSDSWVMSNIVEPGIQSCAIDEHGKP
VSQETFLVEFKKIADCVAQRLKEQPVIVAHSENTFDGSGIKRLLSNKFELDKTMTAALEN
VPKDRNGKLSKDYLRVAVDAVAASAGLPPIGAVAQMDVVVSEAFKMVNADDGKLVKEDEF
KKLLTEILGSIMLQLEGNPIAISSNSVVHEPLASPSSTLLQPSS

High Scoring Gene Products

Symbol, full name Information P value
AT4G38810 protein from Arabidopsis thaliana 1.4e-71
AT5G28830 protein from Arabidopsis thaliana 7.2e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027352
        (224 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2141816 - symbol:AT4G38810 species:3702 "Arabi...   724  1.4e-71   1
TAIR|locus:2150476 - symbol:AT5G28830 species:3702 "Arabi...   165  7.2e-12   1


>TAIR|locus:2141816 [details] [associations]
            symbol:AT4G38810 species:3702 "Arabidopsis thaliana"
            [GO:0005509 "calcium ion binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] InterPro:IPR002048 InterPro:IPR011992
            PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 EMBL:AL161594 EMBL:AL035656 EMBL:AY056249
            IPI:IPI00516483 PIR:T06080 RefSeq:NP_195592.1 UniGene:At.21986
            ProteinModelPortal:Q9T0I9 SMR:Q9T0I9 PRIDE:Q9T0I9
            EnsemblPlants:AT4G38810.2 GeneID:830036 KEGG:ath:AT4G38810
            TAIR:At4g38810 HOGENOM:HOG000239911 InParanoid:Q9T0I9 OMA:VAHSENT
            PhylomeDB:Q9T0I9 ProtClustDB:CLSN2685638 Genevestigator:Q9T0I9
            Uniprot:Q9T0I9
        Length = 375

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 146/225 (64%), Positives = 176/225 (78%)

Query:     3 SIFSQIESP-DGSMRDFIIKALDKLTVEQGMPPSSDSWVMSNIVEPGIQSCAIDE--HGK 59
             S+FS++ S  D S+RD I+KAL  L+V+ GMPPS+D WVMSNIVEP + SC  +E    K
Sbjct:   145 SVFSELSSSKDASLRDCIVKALQSLSVDHGMPPSNDPWVMSNIVEPIVDSCLDEEDKREK 204

Query:    60 PVSQETFLVEFKKIADCVAQRLKEQPVIVAHSENTFDGSGIKRLLSNKFELDKTMTAALE 119
               SQE FL  FK++ + VAQRL EQPVIVAHSENTFDGSGI+RLLSNKFE DK +  A+E
Sbjct:   205 SASQERFLEAFKRVVESVAQRLNEQPVIVAHSENTFDGSGIRRLLSNKFEFDKALNVAME 264

Query:   120 NVPKDRNGKLSKDYLRVAVDAVAASAGLPPIGAVAQMDVVVSEAFKMVNADDGKLVKEDE 179
              +PKDR GK+SK YLR  +D VA SA LPPIGAV+QMD ++ EA KMVN DDG +VKE+E
Sbjct:   265 TIPKDRQGKVSKGYLRAVLDTVAPSATLPPIGAVSQMDNMIMEALKMVNGDDGNVVKEEE 324

Query:   180 FKKLLTEILGSIMLQLEGNPIAISSNSVVHEPLASPSSTLLQPSS 224
             FKK + EILGSIMLQLEG+PI++SSNSVVHEPL S  +T L PS+
Sbjct:   325 FKKTMAEILGSIMLQLEGSPISVSSNSVVHEPLTS--ATFL-PST 366

 Score = 140 (54.3 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 35/111 (31%), Positives = 56/111 (50%)

Query:    92 ENTFDGSGIKRLLSNKFELDKTMTAALENVPKDRNGKLSKDYLRVAVDAVAASAGLPPIG 151
             +   DGS I  L+ N+   DK +    + + +D +GKLS   L+ AV  + A+ GLP  G
Sbjct:    12 QQVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQG 71

Query:   152 AVAQMDVVVSEAFKMVNADDGKLVKEDEFKKLLTEILGSIMLQLEGNPIAI 202
                  D + SE          + V + EFK++L++IL  +   L+ +PI I
Sbjct:    72 TSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVI 122


>TAIR|locus:2150476 [details] [associations]
            symbol:AT5G28830 species:3702 "Arabidopsis thaliana"
            [GO:0005509 "calcium ion binding" evidence=IEA;ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] InterPro:IPR002048 InterPro:IPR011992 SMART:SM00054
            EMBL:CP002688 GO:GO:0005509 Gene3D:1.10.238.10 IPI:IPI00517104
            RefSeq:NP_198235.1 UniGene:At.55086 ProteinModelPortal:F4KA19
            PRIDE:F4KA19 EnsemblPlants:AT5G28830.1 GeneID:833001
            KEGG:ath:AT5G28830 OMA:HEKPITI PhylomeDB:F4KA19 Uniprot:F4KA19
        Length = 324

 Score = 165 (63.1 bits), Expect = 7.2e-12, P = 7.2e-12
 Identities = 53/207 (25%), Positives = 101/207 (48%)

Query:     3 SIFSQIESPD-GSM-RDFIIKALDKLTVEQGMPPSSDSWVMSNIVEPGIQSCAIDEHGKP 60
             ++F+ ++  D G + +  I KAL  + VE G+PP S+  ++ +I++        DE    
Sbjct:   127 NLFTDLDEEDKGKLCKSEIRKALVHMGVEMGVPPLSEFPILDDIIKK--HDADSDEE--- 181

Query:    61 VSQETFLVEFKKIADCVAQRLKEQPVIVAHSENTFDGSGIKRLLSNKFELDKTMTAALEN 120
             + Q  F    +++   +A  L E+P+ +  +   F GS I+++L++    +KT+   +E 
Sbjct:   182 LGQAQFAELLQQVLQEIADVLHEKPITIVLNVEIFTGSRIRKILAD----EKTLKCLVEK 237

Query:   121 -VPKDRNGKLSKDYLRVAVDAVAASAGLPPIGAVAQMDVVVSEAF-KMVNADDGKLVKED 178
              + ++ NGK S+ +LR  +       GLPP+ +  +   ++ E     +N  +    KE 
Sbjct:   238 TILEESNGKESQGWLRTLIIKNGKELGLPPLSSENEQVALLYETIISQLNNKENASTKE- 296

Query:   179 EFKKLLTEILGSIMLQLEGNPIAISSN 205
             EF   L +IL      LE  P+  + N
Sbjct:   297 EFMDALKDILKKFEELLETTPVFSAIN 323

 Score = 114 (45.2 bits), Expect = 0.00021, P = 0.00021
 Identities = 40/174 (22%), Positives = 76/174 (43%)

Query:    32 MPPSSDSWVMSNIVEPGIQSCAIDEHGKPVSQETFLVEFKKIADCVAQRLKEQPVIVAHS 91
             +PP      +S + +    +       K  + E   V F  +AD     LK+ P++V+  
Sbjct:    51 LPPHLKETAISQVSDGDHVTFRRTMFNKQQASEKLGVFFSTVADA----LKDTPIVVS-- 104

Query:    92 ENTFDGSGIKRLLSNKFELDKTMTAALENVPKDRNGKLSKDYLRVAVDAVAASAGLPPIG 151
                 DG+ +K  L ++ +          ++ ++  GKL K  +R A+  +    G+PP+ 
Sbjct:   105 --ILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKALVHMGVEMGVPPLS 162

Query:   152 AVAQMDVVVSEAFKMVNADDGKLVKEDEFKKLLTEILGSIMLQLEGNPIAISSN 205
                 +D ++    K  +AD  + + + +F +LL ++L  I   L   PI I  N
Sbjct:   163 EFPILDDII----KKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.130   0.356    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      224       224   0.00099  112 3  11 23  0.45    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  152 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.16u 0.27s 20.43t   Elapsed:  00:00:01
  Total cpu time:  20.16u 0.27s 20.43t   Elapsed:  00:00:01
  Start:  Fri May 10 11:22:50 2013   End:  Fri May 10 11:22:51 2013

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