BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027357
MYYRQSKEYKNPSEERTAALQLALDVVESEDAKNVITRELEGGRAGKDSTGDELVDVVKV
PVVRLKIGEVSEATTVVVLPVCRAEEKENNVLEAPWECKSEGDFGVVVAEKGWTRWVVLP
GWEPVVGLRNGGVVVAFSDARVLPWRANRWYYEEAILVVADRSRKEVAVDDGFYLVVGDG
GELKVERGSMLKERGVEESLGTVALVVRPPKEETDDQIADEDWD

High Scoring Gene Products

Symbol, full name Information P value
AT3G04550 protein from Arabidopsis thaliana 6.8e-56
AT5G28500 protein from Arabidopsis thaliana 2.3e-55

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027357
        (224 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2084888 - symbol:AT3G04550 "AT3G04550" species...   576  6.8e-56   1
TAIR|locus:2182763 - symbol:AT5G28500 "AT5G28500" species...   571  2.3e-55   1


>TAIR|locus:2084888 [details] [associations]
            symbol:AT3G04550 "AT3G04550" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AC011437 eggNOG:NOG08025 HOGENOM:HOG000243466
            ProtClustDB:CLSN2687342 UniGene:At.48619 UniGene:At.71013
            EMBL:AY034914 EMBL:AY062440 EMBL:AY063107 EMBL:AY114629
            IPI:IPI00542818 RefSeq:NP_566230.1 STRING:Q9SR19 PaxDb:Q9SR19
            PRIDE:Q9SR19 ProMEX:Q9SR19 EnsemblPlants:AT3G04550.1 GeneID:819611
            KEGG:ath:AT3G04550 TAIR:At3g04550 InParanoid:Q9SR19 OMA:YELRILN
            PhylomeDB:Q9SR19 ArrayExpress:Q9SR19 Genevestigator:Q9SR19
            Uniprot:Q9SR19
        Length = 449

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 127/230 (55%), Positives = 154/230 (66%)

Query:     1 MYYRQSKEYKNPSEERTAALQLALDVVESEDAKNVITRELEGGR-AGKDSTG---DELXX 56
             +YYRQS+E KNPS++RT+ L  AL V ESE AKN +  EL G + A K+      +E   
Sbjct:   225 LYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEEVK 284

Query:    57 XXXXXXXRLKIGEVSEATTVVVLPVCRAEEKENNVLEAPWECKSEGDFGVVVAEKGWTRW 116
                    RLK GEV+EAT+VVVLPVC+AEE E  +LEAP E  + GDF VV AEKGW RW
Sbjct:   285 AIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRW 344

Query:   117 VVLPGWEPVVGLRNGGVVVAFSDAR-VLPWRANRWYYEEAILVVADRSRKEVAVDDGFYL 175
             VVLP W PV  +  GGV V+F D R VLPW       EE +LVVADR R  V  DDG+YL
Sbjct:   345 VVLPSWNPVAAIGKGGVAVSFRDDRKVLPWDGK----EEPLLVVADRVRNVVEADDGYYL 400

Query:   176 VVGDGGELKVERGSMLKERGVEESLGTVALVVRPPKEETDD-QIADEDWD 224
             VV + G LK+E+GS LK R V+ESLG V LVVRPP+E+ DD Q + ++WD
Sbjct:   401 VVAENG-LKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449


>TAIR|locus:2182763 [details] [associations]
            symbol:AT5G28500 "AT5G28500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0010103
            "stomatal complex morphogenesis" evidence=RCA] [GO:0016556 "mRNA
            modification" evidence=RCA] [GO:0019252 "starch biosynthetic
            process" evidence=RCA] [GO:0043085 "positive regulation of
            catalytic activity" evidence=RCA] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009570 EMBL:AF262043 EMBL:BT000776
            EMBL:BT015787 IPI:IPI00521587 RefSeq:NP_198202.1 UniGene:At.25591
            STRING:Q9LKR8 PaxDb:Q9LKR8 PRIDE:Q9LKR8 ProMEX:Q9LKR8
            EnsemblPlants:AT5G28500.1 GeneID:832943 KEGG:ath:AT5G28500
            TAIR:At5g28500 eggNOG:NOG08025 HOGENOM:HOG000243466
            InParanoid:Q9LKR8 OMA:QGNWVEW PhylomeDB:Q9LKR8
            ProtClustDB:CLSN2687342 ArrayExpress:Q9LKR8 Genevestigator:Q9LKR8
            Uniprot:Q9LKR8
        Length = 434

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 121/227 (53%), Positives = 159/227 (70%)

Query:     1 MYYRQSKEYKNPSEERTAALQLALDVVESEDAKNVITRELEGGRAGKDSTGDELXXXXXX 60
             M YR+S+E+++PSE RT  L+ AL+   +E AK  + REL G  + ++   +E       
Sbjct:   215 MLYRKSREHRSPSEIRTTLLEQALETAVTEKAKKAVLRELHG-ESEEERVKEEEIKIIRV 273

Query:    61 XXXRLKIGEVSEATTVVVLPVCRAEEKENNVLEAPWECKSEGDFGVVVAEKGWTRWVVLP 120
                RL+ GEV+ A++VVVLPVC+AEE E  +LEAP E +S G+FGVV AEK W+RWVVLP
Sbjct:   274 PVVRLRFGEVAGASSVVVLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLP 333

Query:   121 GWEPVVGLRNGGVVVAFSDAR-VLPWRANRWYYEEAILVVADRSRKEVAVDDGFY-LVVG 178
             GW+PVV +R G V V+FSD R VLPW        EAI+VV DR +K V  D+G+Y LVV 
Sbjct:   334 GWDPVVAVRKG-VAVSFSDDREVLPWNGKG----EAIMVVIDREKKTVEADNGYYYLVVA 388

Query:   179 DGGELKVERGSMLKERGVEESLGTVALVVRPPKEETDD-QIADEDWD 224
             DGG +K++RG +LKE+GV ESLG V LVVRPP+++ D+ QI DEDWD
Sbjct:   389 DGG-MKLDRGLVLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.134   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      224       215   0.00087  112 3  11 23  0.45    33
                                                     32  0.50    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  176 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.49u 0.12s 17.61t   Elapsed:  00:00:01
  Total cpu time:  17.49u 0.12s 17.61t   Elapsed:  00:00:01
  Start:  Fri May 10 11:33:05 2013   End:  Fri May 10 11:33:06 2013

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