BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027357
         (224 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P73801|Y1261_SYNY3 Uncharacterized protein slr1261 OS=Synechocystis sp. (strain PCC
           6803 / Kazusa) GN=slr1261 PE=4 SV=1
          Length = 179

 Score = 32.0 bits (71), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 51  GDELVDVVKVPVVRLKIGEVSEATTVVVLPVCRAEEKENNVLEAPWECKSEGDFGVVVAE 110
           G+ + D   +P+ RL   ++ +A     +  C++  +  N L+   + +S G  G++  E
Sbjct: 38  GEHITDAYSLPLSRLNPSQLPQAEGKTTVLYCQSSNRSGNALQ---QLRSAGVEGIIHLE 94

Query: 111 KGWTRW 116
            G   W
Sbjct: 95  GGLLAW 100


>sp|Q9EQF6|DPYL5_MOUSE Dihydropyrimidinase-related protein 5 OS=Mus musculus GN=Dpysl5
           PE=1 SV=1
          Length = 564

 Score = 30.8 bits (68), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 185 VERGSMLKERGVEES--LGTVALVVRPPKEETDDQIAD 220
           V+R   LK RGV+ +  LG VA+VV P K+E    +AD
Sbjct: 476 VQREKTLKVRGVDRTPYLGDVAIVVHPGKKEMGTPLAD 513


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.134    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,824,002
Number of Sequences: 539616
Number of extensions: 3808086
Number of successful extensions: 7716
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7715
Number of HSP's gapped (non-prelim): 13
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)