BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027360
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y7P2|YCKF_SCHPO Uncharacterized protein C1450.15 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1450.15 PE=3 SV=2
Length = 494
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 45 LISNPSRTLRL---IWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALG 101
LI NP R LR IW M L I + ++P K ++ G ++ IG+L+ +
Sbjct: 332 LIENPYRMLRNTFPIWFIMQTLQI-----YIQSPRPPLTPKRLLAGAASMLIGSLLISFI 386
Query: 102 AIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMIC 161
+A GAP+ + F T +L +S+FT P AS + E W+R T + +V +
Sbjct: 387 LVAFGAPL-LHDFHLTYFCALTLSVFTVYPLASTLAFNTEQWQRFL--TLKSFNVIGSMQ 443
Query: 162 LPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVL 211
L + G +IGAWFGA+P+PLDW+RPWQ WPI + GA GY ++ +L
Sbjct: 444 LRSWGPIIGAWFGAFPIPLDWDRPWQAWPITIVIGAFLGYAFAAIVGEIL 493
>sp|O09101|PIGF_MOUSE Phosphatidylinositol-glycan biosynthesis class F protein OS=Mus
musculus GN=Pigf PE=1 SV=1
Length = 219
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 106 GAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAH 165
GAP+ I+ +T +++++S FT VP + G + + W R+F+ + + + +
Sbjct: 102 GAPL-IELVLETFLFAVVLSTFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQITTI 160
Query: 166 GAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLS 208
+ GAW GA+P+PLDWERPWQ WPI + GA GY+ +V+S
Sbjct: 161 SSFTGAWLGAFPIPLDWERPWQVWPISCTLGATFGYVAGLVIS 203
>sp|Q07326|PIGF_HUMAN Phosphatidylinositol-glycan biosynthesis class F protein OS=Homo
sapiens GN=PIGF PE=1 SV=1
Length = 219
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 18 QTFFIHLICGVGLAVGLWVAHNFY-SISLISNPSRTLRLIWVTMCP-----LVILFYSCF 71
+ + HL+C + + +++ F + S++ L W+ +C + ++ Y
Sbjct: 8 RLLYTHLLCIFSIILSVFIPSLFLENFSILET-----HLTWLCICSGFVTAVNLVLYLVV 62
Query: 72 RKNPE-KCSYLKAVIRGVLALPIGALVNALGA----IALGAPVGIQYFPKTVNWSLLMSL 126
+ N K S L + G L I L++ + GAP+ I+ +T +++++S
Sbjct: 63 KPNTSSKRSSLSHKVTGFLKCCIYFLMSCFSFHVIFVLYGAPL-IELALETFLFAVILST 121
Query: 127 FTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPW 186
FT VP + G + + W R+F+ + + + + + +GAW GA P+PLDWERPW
Sbjct: 122 FTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQITTISSFVGAWLGALPIPLDWERPW 181
Query: 187 QEWPICVSYGAMAGYLITMVLS 208
Q WPI + GA GY+ +V+S
Sbjct: 182 QVWPISCTLGATFGYVAGLVIS 203
>sp|P0C148|GPI11_MAGO7 Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 /
FGSC 8958) GN=GPI11 PE=3 SV=2
Length = 264
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 92 PIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTK 151
PI AL+ + GAP + + P T +L +SL T P G+ WR + T
Sbjct: 144 PIHALM-----VLFGAPF-LTHAPHTFLCALNLSLLTLFPLFYTRGAEASAWRALAGFTA 197
Query: 152 P-NASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFV 210
P + SV ++ GA GAW GA P+PLDW+R WQ WP+ V G GY I
Sbjct: 198 PIDESVGGLV-----GACFGAWLGAVPIPLDWDRDWQRWPVTVLTGIYVGYAIGSYGGRT 252
Query: 211 LVLARG 216
L+ RG
Sbjct: 253 LLRIRG 258
>sp|Q6BHK4|GPI11_DEBHA Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=GPI11 PE=3 SV=2
Length = 236
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 72 RKNPEKCSYLKA---VIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFT 128
N E L A VI VL++P+ + I LGAP+ + +T S+ +SL
Sbjct: 98 HNNSENVPLLLAGGIVISLVLSVPL-----FVALILLGAPLA-SHLKETYLLSIHLSLLI 151
Query: 129 FVPAASVFGSSWEDWRRIF-AHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQ 187
F P+ ++ ++ + A NA I L A AVIG WFG P+PLDW+R WQ
Sbjct: 152 FYPSLVLYKYDYKSLVKFLDADGVYNAIAKNQILLSAVLAVIGTWFGVIPIPLDWDRDWQ 211
Query: 188 EWPICVSYGAMAGYLITMVLSFV 210
+WPI + GA G + + F+
Sbjct: 212 QWPITLLTGAYIGSFVGGIACFL 234
>sp|Q6C741|GPI11_YARLI Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=GPI11 PE=3 SV=1
Length = 223
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 103 IALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASV-DYMIC 161
+ GAP I T ++ MS+ +P + + W I A +P V +C
Sbjct: 106 VLFGAP-AISLVHNTFVCAMHMSILAVLPLFFTYHLDSKVWADIIAMRRPLDHVYAASVC 164
Query: 162 LPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVLSFVLVLAR 215
+IGAW GA P+P DW+RPWQ+WPI + GA GY + + L L +
Sbjct: 165 -----TLIGAWLGAIPIPYDWDRPWQQWPITILAGAYLGYFVGTLGGIALELTK 213
>sp|Q871U9|GPI11_NEUCR Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=gpi-11 PE=3 SV=1
Length = 272
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 124 MSLFTFVPAASVFGSSWEDWRRIFAHTKP-NASVDYMICLPAHGAVIGAWFGAWPMPLDW 182
++L T P V G W + P + + ++ G ++GAW GA P+PLDW
Sbjct: 183 LALLTLFPLFYVHGVDSAAWAAVGGFRAPLDETFGGLV-----GGIVGAWLGAVPIPLDW 237
Query: 183 ERPWQEWPICVSYGAMAGYLITMVLSFVL 211
+R WQ WP+ + GA GYL+ VL L
Sbjct: 238 DREWQRWPVTILCGAYGGYLLGRVLGGTL 266
>sp|Q5AFT2|GPI11_CANAL Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=GPI11 PE=3 SV=1
Length = 265
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 88 VLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIF 147
VL+LP+ ++ I +GAPV +Y KT+ SL +S F P + + +R+F
Sbjct: 142 VLSLPLFVVI-----ILMGAPV-YKYSLKTLYLSLHLSQLIFNPLIILSNLNVNKIKRLF 195
Query: 148 AHTKPNASVDYMICLPAHGAVI--------GAWFGAWPMPLDWERPWQEWPIC 192
D++ + H ++ G W G P+PLDW+RPWQ+WPI
Sbjct: 196 KQ-------DHLYRIIFHHGILSSVLLTLGGCWLGVIPIPLDWDRPWQQWPIT 241
>sp|Q4WIQ0|GPI11_ASPFU Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=gpi11 PE=3 SV=1
Length = 297
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 103 IALGAPVGIQYFPKTVNWSLLMSLFTFVPAASVFGSSWEDWRRIFAHTKPNASVDYMICL 162
+ GAP+ + +TV + M+L V G WR ++A +P +V
Sbjct: 173 VLFGAPL-TTHNAETVLCAAHMALLASTALIYVHGVDGAVWREVWAFARPADAVWGG--- 228
Query: 163 PAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITMVL 207
A G +GAWFGA P+PLDW+RPWQ +PI + GA G+ + V+
Sbjct: 229 -ALGTALGAWFGAVPIPLDWDRPWQAFPITILTGAYFGFAVGSVV 272
>sp|Q4HXT5|GPI11_GIBZE Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=GPI11 PE=3 SV=1
Length = 255
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 166 GAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLI 203
G V+GAW G+ P+PLDW+R WQ+WP+ + GA GY++
Sbjct: 195 GTVVGAWLGSVPIPLDWDREWQKWPVTIVVGAYLGYIV 232
>sp|Q75EY7|GPI11_ASHGO Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=GPI11 PE=3 SV=1
Length = 217
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 169 IGAWFGAWPMPLDWERPWQEWPICVSYGAMAG 200
+G W +PLDW+RPWQEWPI + GA G
Sbjct: 175 VGCWISCLAIPLDWDRPWQEWPIPLVVGAQLG 206
>sp|Q06636|GPI11_YEAST Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=GPI11 PE=1 SV=1
Length = 219
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 33/194 (17%)
Query: 15 SPMQTFFIHLICGVGLAVGLWVAHNFYSISLISNPSRTLRLIWVTMCPLVILFYSC--FR 72
+P+ TF HL+ + V +V+ NF ++ L+S LI + LV+ F C +
Sbjct: 46 TPLMTFPYHLVALLYYYV--FVSSNFNTVKLLS------FLIPTQVAYLVLQFNKCTVYG 97
Query: 73 KNPEKCSY-LKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTFVP 131
K +Y L + GV L + L I GAP+ + +T SL + +
Sbjct: 98 NKIIKINYSLTIICLGVTFLL--SFPTMLLTILFGAPL-MDLLWETWLLSLHFAFLAYPA 154
Query: 132 AASVFGSSWED--WRRIFAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEW 189
SVF ++ W++ F V+G W +PLDW+R WQ W
Sbjct: 155 VYSVFNCDFKVGLWKKYFIFI-----------------VVGGWISCVVIPLDWDRDWQNW 197
Query: 190 PICVSYGAMAGYLI 203
PI + G G L+
Sbjct: 198 PIPIVVGGYLGALV 211
>sp|Q6CTT3|GPI11_KLULA Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GPI11
PE=3 SV=1
Length = 217
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 166 GAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLI 203
VIG W + +PLDW+R WQ WP+ + GA G I
Sbjct: 172 SVVIGCWISCFVIPLDWDRDWQAWPVPLIVGAYLGSFI 209
>sp|Q6FSD1|GPI11_CANGA Glycosylphosphatidylinositol anchor biosynthesis protein 11
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=GPI11 PE=3 SV=1
Length = 217
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 168 VIGAWFGAWPMPLDWERPWQEWPICVSYGAMAG 200
V+G W +PLDW+R WQ WPI + GA G
Sbjct: 174 VVGCWISCVVIPLDWDRDWQAWPIPIVIGAYLG 206
>sp|B1MZN0|DAPH_LEUCK 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
OS=Leuconostoc citreum (strain KM20) GN=dapH PE=3 SV=1
Length = 234
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 23/124 (18%)
Query: 70 CFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGIQYFPKTVNWSLLMSLFTF 129
F N +K + +K +GVL I A V G ++ G +G +WS + L
Sbjct: 12 SFIANAKKVTPVKVTYKGVLTGEIPATVQQFGGVSFGQLIG--------DWSEIQPLIAA 63
Query: 130 VPAASVFGSSWE--------DWRRIFAHTKPNASVDYMICLPAH-----GAV--IGAWFG 174
+PA +VF + D + + A +P A + + + + GAV IGA G
Sbjct: 64 LPAENVFVENDARNSAVPLLDKKAVNARIEPGAIIRDQVTIGDNAVIMLGAVINIGAEIG 123
Query: 175 AWPM 178
+ M
Sbjct: 124 SGTM 127
>sp|Q8R415|PKR2_RAT Prokineticin receptor 2 OS=Rattus norvegicus GN=Prokr2 PE=2 SV=2
Length = 383
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 9 NPSQSVSPMQTFF------------IHLICGVGLAVGLWVAHNFYSIS-----LISNPSR 51
+ + V+ QTFF I L+CGVG V + + + LI+N +
Sbjct: 38 DDDEDVTKTQTFFAAKIVIGVALAGIMLVCGVGNFVFIAALARYKKLRNLTNLLIANLAI 97
Query: 52 TLRLIWVTMCPLVILFYSCFRKNPEKCSYLKAVIRGVLALPIGALVNALGAIALGAPVGI 111
+ L+ + CP + +Y + + E L A + + + + NAL AIA+ + I
Sbjct: 98 SDFLVAIVCCPFEMDYYVVRQLSWEHGHVLCASVNYLRTVSLYVSTNALLAIAIDRYLAI 157
Query: 112 QYFPKTVNWS 121
+ K +N+
Sbjct: 158 VHPLKRMNYQ 167
>sp|P67147|Y2672_MYCBO UPF0060 membrane protein Mb2672c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2672c PE=3 SV=1
Length = 110
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 147 FAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITM 205
FA +P+A + L A+G V A AW M LD RP W + + G MAG + M
Sbjct: 49 FATLQPDAH--FGRVLAAYGGVFVAGSLAWGMALDGFRP-DRWDVIGALGCMAGVAVIM 104
>sp|A5U5Z1|Y2668_MYCTA UPF0060 membrane protein MRA_2668 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=MRA_2668 PE=3 SV=1
Length = 110
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 147 FAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITM 205
FA +P+A + L A+G V A AW M LD RP W + + G MAG + M
Sbjct: 49 FATLQPDAH--FGRVLAAYGGVFVAGSLAWGMALDGFRP-DRWDVIGALGCMAGVAVIM 104
>sp|A1KLZ1|Y2666_MYCBP UPF0060 membrane protein BCG_2666c OS=Mycobacterium bovis (strain
BCG / Pasteur 1173P2) GN=BCG_2666c PE=3 SV=1
Length = 110
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 147 FAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITM 205
FA +P+A + L A+G V A AW M LD RP W + + G MAG + M
Sbjct: 49 FATLQPDAH--FGRVLAAYGGVFVAGSLAWGMALDGFRP-DRWDVIGALGCMAGVAVIM 104
>sp|C1AFB2|Y2660_MYCBT UPF0060 membrane protein JTY_2660 OS=Mycobacterium bovis (strain
BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=JTY_2660
PE=3 SV=1
Length = 110
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 147 FAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITM 205
FA +P+A + L A+G V A AW M LD RP W + + G MAG + M
Sbjct: 49 FATLQPDAH--FGRVLAAYGGVFVAGSLAWGMALDGFRP-DRWDVIGALGCMAGVAVIM 104
>sp|A1QUS1|Y2657_MYCTF UPF0060 membrane protein TBFG_12657 OS=Mycobacterium tuberculosis
(strain F11) GN=TBFG_12657 PE=3 SV=1
Length = 110
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 147 FAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITM 205
FA +P+A + L A+G V A AW M LD RP W + + G MAG + M
Sbjct: 49 FATLQPDAH--FGRVLAAYGGVFVAGSLAWGMALDGFRP-DRWDVIGALGCMAGVAVIM 104
>sp|P67146|Y2639_MYCTU UPF0060 membrane protein Rv2639c/MT2717 OS=Mycobacterium
tuberculosis GN=Rv2639c PE=3 SV=1
Length = 110
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 147 FAHTKPNASVDYMICLPAHGAVIGAWFGAWPMPLDWERPWQEWPICVSYGAMAGYLITM 205
FA +P+A + L A+G V A AW M LD RP W + + G MAG + M
Sbjct: 49 FATLQPDAH--FGRVLAAYGGVFVAGSLAWGMALDGFRP-DRWDVIGALGCMAGVAVIM 104
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,412,621
Number of Sequences: 539616
Number of extensions: 3410478
Number of successful extensions: 10260
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 10238
Number of HSP's gapped (non-prelim): 31
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)