Query 027360
Match_columns 224
No_of_seqs 129 out of 173
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 14:26:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027360.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027360hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t5ja_ a.209.1.1 (A:) Hypothe 10.3 24 0.0017 27.7 -0.4 22 162-183 258-279 (301)
2 d1eqka_ d.17.1.2 (A:) Phytocys 9.7 27 0.0019 24.0 -0.3 6 182-187 80-85 (102)
3 d2onkc1 f.58.1.1 (C:1-252) Mol 5.4 1.7E+02 0.012 21.6 2.6 9 140-148 35-43 (252)
4 d1r4ca_ d.17.1.2 (A:) Cystatin 5.1 44 0.0032 22.7 -1.1 6 182-187 92-97 (110)
5 d1jvaa2 d.95.2.2 (A:464-581) V 5.1 89 0.0065 22.4 0.6 13 163-175 26-38 (118)
6 d1cewi_ d.17.1.2 (I:) Cystatin 4.9 55 0.004 22.0 -0.6 6 182-187 92-97 (108)
7 d1i0va_ d.1.1.4 (A:) RNase T1 4.9 78 0.0057 22.3 0.2 10 182-191 52-61 (104)
8 d1rtua_ d.1.1.4 (A:) RNase U2 4.6 75 0.0055 22.5 -0.1 10 183-192 57-66 (114)
9 d1wxma1 d.15.1.5 (A:8-80) A-Ra 4.6 77 0.0056 20.9 -0.0 8 178-185 52-59 (73)
10 d1c1yb_ d.15.1.5 (B:) c-Raf1 R 4.6 79 0.0058 21.0 0.0 9 177-185 55-63 (77)
No 1
>d1t5ja_ a.209.1.1 (A:) Hypothetical protein MJ1187 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=10.30 E-value=24 Score=27.67 Aligned_cols=22 Identities=32% Similarity=0.703 Sum_probs=17.4
Q ss_pred hhhhhhhhhhhhcccccCCCCC
Q 027360 162 LPAHGAVIGAWFGAWPMPLDWE 183 (224)
Q Consensus 162 ~~~~g~vlGaWlGA~pIPLDWD 183 (224)
....|+++||..|.=-||-||=
T Consensus 258 aai~Gal~GA~~G~~~IP~~w~ 279 (301)
T d1t5ja_ 258 ASMYGAMAGAYYGFKNIPKEWI 279 (301)
T ss_dssp HHHHHHHHHHHHCGGGSCHHHH
T ss_pred HHHHHHHHHHHhChhcCCHHHH
Confidence 3457888888888888998873
No 2
>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]}
Probab=9.71 E-value=27 Score=24.00 Aligned_cols=6 Identities=67% Similarity=2.289 Sum_probs=3.9
Q ss_pred CCCCCC
Q 027360 182 WERPWQ 187 (224)
Q Consensus 182 WDRpWQ 187 (224)
|+|||+
T Consensus 80 w~~pW~ 85 (102)
T d1eqka_ 80 WEKPWM 85 (102)
T ss_dssp EEBTTT
T ss_pred EEeeCC
Confidence 666665
No 3
>d2onkc1 f.58.1.1 (C:1-252) Molybdate/tungstate transport system permease protein WtpB (ModB) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=5.45 E-value=1.7e+02 Score=21.62 Aligned_cols=9 Identities=0% Similarity=0.412 Sum_probs=4.0
Q ss_pred hHHHHHHHh
Q 027360 140 WEDWRRIFA 148 (224)
Q Consensus 140 ~~~w~~vf~ 148 (224)
.++|+++++
T Consensus 35 ~~n~~~~~~ 43 (252)
T d2onkc1 35 FDEFLKAAS 43 (252)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 344444444
No 4
>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.08 E-value=44 Score=22.66 Aligned_cols=6 Identities=50% Similarity=1.475 Sum_probs=3.3
Q ss_pred CCCCCC
Q 027360 182 WERPWQ 187 (224)
Q Consensus 182 WDRpWQ 187 (224)
|+|||+
T Consensus 92 ~~~PW~ 97 (110)
T d1r4ca_ 92 YAVPWQ 97 (110)
T ss_dssp EEEGGG
T ss_pred EEeccC
Confidence 455554
No 5
>d1jvaa2 d.95.2.2 (A:464-581) VMA1-derived endonuclease (VDE) PI-SceI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.08 E-value=89 Score=22.43 Aligned_cols=13 Identities=23% Similarity=0.703 Sum_probs=10.1
Q ss_pred hhhhhhhhhhhcc
Q 027360 163 PAHGAVIGAWFGA 175 (224)
Q Consensus 163 ~~~g~vlGaWlGA 175 (224)
++..-++|.|+|-
T Consensus 26 ~~~aYlLGlWlGD 38 (118)
T d1jvaa2 26 KVLAYLLGLWIGD 38 (118)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhhhhhhheeecC
Confidence 4556799999984
No 6
>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=4.90 E-value=55 Score=22.00 Aligned_cols=6 Identities=33% Similarity=1.226 Sum_probs=2.8
Q ss_pred CCCCCC
Q 027360 182 WERPWQ 187 (224)
Q Consensus 182 WDRpWQ 187 (224)
|+|||+
T Consensus 92 ~~~pW~ 97 (108)
T d1cewi_ 92 YSIPWL 97 (108)
T ss_dssp EEETTT
T ss_pred EEeccC
Confidence 344444
No 7
>d1i0va_ d.1.1.4 (A:) RNase T1 {Aspergillus oryzae [TaxId: 5062]}
Probab=4.89 E-value=78 Score=22.33 Aligned_cols=10 Identities=50% Similarity=1.225 Sum_probs=8.7
Q ss_pred CCCCCCccCc
Q 027360 182 WERPWQEWPI 191 (224)
Q Consensus 182 WDRpWQ~WPI 191 (224)
..+|||++||
T Consensus 52 ~~~~~~EfPi 61 (104)
T d1i0va_ 52 VSSPYYEWPI 61 (104)
T ss_dssp SCSCEEEEEC
T ss_pred CCCccEEeee
Confidence 5789999997
No 8
>d1rtua_ d.1.1.4 (A:) RNase U2 {Ustilago sphaerogena [TaxId: 5271]}
Probab=4.65 E-value=75 Score=22.54 Aligned_cols=10 Identities=40% Similarity=1.292 Sum_probs=8.5
Q ss_pred CCCCCccCch
Q 027360 183 ERPWQEWPIC 192 (224)
Q Consensus 183 DRpWQ~WPI~ 192 (224)
++|||++||-
T Consensus 57 ~~~~~EfPI~ 66 (114)
T d1rtua_ 57 SGPWSEFPLV 66 (114)
T ss_dssp SSCEEEEECC
T ss_pred CCCeEEeEEe
Confidence 7789999994
No 9
>d1wxma1 d.15.1.5 (A:8-80) A-Raf proto-oncogene serine/threonine-protein kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.62 E-value=77 Score=20.86 Aligned_cols=8 Identities=13% Similarity=0.543 Sum_probs=5.4
Q ss_pred cCCCCCCC
Q 027360 178 MPLDWERP 185 (224)
Q Consensus 178 IPLDWDRp 185 (224)
-|+|||.+
T Consensus 52 ~~i~~d~d 59 (73)
T d1wxma1 52 TVTAWDTA 59 (73)
T ss_dssp EEECSSSB
T ss_pred ceeecCCc
Confidence 46777765
No 10
>d1c1yb_ d.15.1.5 (B:) c-Raf1 RBD {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.60 E-value=79 Score=21.01 Aligned_cols=9 Identities=33% Similarity=0.767 Sum_probs=6.5
Q ss_pred ccCCCCCCC
Q 027360 177 PMPLDWERP 185 (224)
Q Consensus 177 pIPLDWDRp 185 (224)
=.|+|||.+
T Consensus 55 ~~~l~~d~d 63 (77)
T d1c1yb_ 55 KARLDWNTD 63 (77)
T ss_dssp EEEECTTSB
T ss_pred ceeeccCCc
Confidence 367888875
Done!