Query 027361
Match_columns 224
No_of_seqs 269 out of 1607
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 08:48:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027361.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027361hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3146 Dolichyl pyrophosphate 100.0 1.5E-42 3.2E-47 272.4 22.1 210 5-215 10-220 (228)
2 cd03382 PAP2_dolichyldiphospha 100.0 1.8E-28 3.9E-33 191.9 19.5 157 10-168 2-159 (159)
3 cd03392 PAP2_like_2 PAP2_like_ 99.9 4.1E-25 8.8E-30 176.6 17.5 168 3-173 6-181 (182)
4 cd03395 PAP2_like_4 PAP2_like_ 99.9 2E-24 4.4E-29 171.9 17.0 156 7-173 3-176 (177)
5 cd03388 PAP2_SPPase1 PAP2_like 99.9 4.5E-24 9.8E-29 165.7 18.3 141 21-167 2-150 (151)
6 PRK11837 undecaprenyl pyrophos 99.9 2.9E-23 6.3E-28 168.2 17.3 111 52-173 60-174 (202)
7 cd03385 PAP2_BcrC_like PAP2_li 99.9 8.3E-23 1.8E-27 157.4 17.1 105 53-168 35-143 (144)
8 PRK10699 phosphatidylglyceroph 99.9 9.7E-23 2.1E-27 168.1 18.5 116 56-178 82-237 (244)
9 cd03383 PAP2_diacylglycerolkin 99.9 4.3E-23 9.4E-28 151.0 13.1 99 53-170 10-108 (109)
10 PLN02250 lipid phosphate phosp 99.9 1.9E-22 4.1E-27 172.3 18.8 118 54-171 101-244 (314)
11 cd03390 PAP2_containing_1_like 99.9 1.3E-22 2.8E-27 163.7 16.4 138 30-169 23-191 (193)
12 PLN02525 phosphatidic acid pho 99.9 4.1E-22 8.8E-27 172.8 19.3 144 29-174 15-167 (352)
13 cd03389 PAP2_lipid_A_1_phospha 99.9 3.2E-22 7E-27 160.4 16.6 106 52-169 70-184 (186)
14 cd03384 PAP2_wunen PAP2, wunen 99.9 1.4E-22 3E-27 157.1 13.6 114 53-166 6-148 (150)
15 cd03391 PAP2_containing_2_like 99.9 4.4E-22 9.5E-27 155.7 16.1 104 54-166 50-157 (159)
16 cd03393 PAP2_like_3 PAP2_like_ 99.9 2E-22 4.4E-27 151.7 13.5 109 49-167 11-124 (125)
17 PLN02731 Putative lipid phosph 99.9 3.1E-22 6.6E-27 171.6 15.8 144 24-171 89-262 (333)
18 PRK09597 lipid A 1-phosphatase 99.9 1.1E-21 2.5E-26 154.9 17.3 116 44-170 70-187 (190)
19 PLN02715 lipid phosphate phosp 99.9 2.4E-21 5.2E-26 166.1 20.2 118 54-171 126-268 (327)
20 cd03394 PAP2_like_5 PAP2_like_ 99.9 3.2E-22 6.9E-27 146.4 11.6 102 52-167 4-105 (106)
21 cd03381 PAP2_glucose_6_phospha 99.9 2.3E-21 4.9E-26 159.7 14.7 122 48-170 13-153 (235)
22 cd03396 PAP2_like_6 PAP2_like_ 99.9 2E-20 4.3E-25 151.4 14.9 113 53-170 69-196 (197)
23 smart00014 acidPPc Acid phosph 99.8 1.2E-19 2.6E-24 134.6 12.2 104 58-167 2-115 (116)
24 KOG3030 Lipid phosphate phosph 99.8 7.6E-19 1.6E-23 150.0 18.1 120 52-171 111-261 (317)
25 COG0671 PgpB Membrane-associat 99.8 4E-17 8.6E-22 132.2 18.3 121 51-174 91-214 (232)
26 cd01610 PAP2_like PAP2_like pr 99.8 2.2E-17 4.8E-22 122.1 13.9 106 56-167 8-121 (122)
27 PF01569 PAP2: PAP2 superfamil 99.7 2.8E-18 6E-23 128.9 5.9 115 53-172 2-125 (129)
28 cd03380 PAP2_like_1 PAP2_like_ 99.7 4.2E-16 9.2E-21 127.2 13.1 97 58-166 100-206 (209)
29 cd03397 PAP2_acid_phosphatase 99.7 8.9E-16 1.9E-20 127.1 13.7 90 66-167 116-214 (232)
30 KOG4268 Uncharacterized conser 99.7 9.9E-16 2.1E-20 115.8 12.4 110 53-170 66-179 (189)
31 KOG2822 Sphingoid base-phospha 99.6 1.4E-14 3E-19 123.8 13.0 154 18-174 77-239 (407)
32 cd03398 PAP2_haloperoxidase PA 99.6 3.2E-14 6.9E-19 117.9 11.4 107 59-167 94-230 (232)
33 cd03386 PAP2_Aur1_like PAP2_li 99.5 4.6E-12 1E-16 101.6 17.5 69 88-167 114-182 (186)
34 COG3907 PAP2 (acid phosphatase 98.7 4.3E-07 9.2E-12 72.0 12.3 114 53-171 109-237 (249)
35 PF14378 PAP2_3: PAP2 superfam 98.6 2.7E-06 5.8E-11 68.4 14.9 64 91-164 126-189 (191)
36 COG1963 Uncharacterized protei 98.4 5.9E-06 1.3E-10 62.1 10.1 106 57-171 13-151 (153)
37 PF02681 DUF212: Divergent PAP 98.3 3.2E-06 6.9E-11 64.2 7.2 53 58-112 8-62 (141)
38 PF14360 PAP2_C: PAP2 superfam 96.7 0.0098 2.1E-07 40.3 6.6 63 93-163 6-68 (74)
39 KOG3058 Uncharacterized conser 86.8 7 0.00015 34.3 9.4 59 93-159 211-269 (351)
40 PF10261 Scs3p: Inositol phosp 79.2 10 0.00022 31.6 7.3 28 137-166 209-236 (238)
41 PF09586 YfhO: Bacterial membr 59.9 1.8E+02 0.0039 28.6 17.3 9 89-97 329-337 (843)
42 PF12270 Cyt_c_ox_IV: Cytochro 50.3 1.1E+02 0.0024 23.2 14.0 52 54-105 39-95 (137)
43 PRK14792 lipoprotein signal pe 44.4 1.5E+02 0.0032 23.0 9.4 19 60-78 15-33 (159)
44 PF06295 DUF1043: Protein of u 42.6 26 0.00056 26.1 2.7 19 153-171 2-20 (128)
45 PF13373 DUF2407_C: DUF2407 C- 38.0 44 0.00095 25.4 3.4 24 146-169 85-108 (140)
46 TIGR03546 conserved hypothetic 37.1 47 0.001 25.7 3.4 36 153-188 110-149 (154)
47 PF02936 COX4: Cytochrome c ox 33.0 1.9E+02 0.0042 21.9 6.2 66 132-217 56-121 (142)
48 PF06738 DUF1212: Protein of u 32.9 2.3E+02 0.005 22.1 7.0 8 152-159 156-163 (193)
49 PF11808 DUF3329: Domain of un 32.4 1.4E+02 0.003 20.6 5.0 7 133-139 17-23 (90)
50 COG0597 LspA Lipoprotein signa 32.2 2.5E+02 0.0054 22.0 8.5 33 138-171 85-117 (167)
51 PRK10726 hypothetical protein; 31.3 2E+02 0.0044 20.7 10.2 83 86-168 15-100 (105)
52 COG4129 Predicted membrane pro 31.1 76 0.0017 27.8 4.2 15 153-167 83-97 (332)
53 TIGR01475 ubiA_other putative 30.9 3.2E+02 0.007 22.9 9.6 33 137-170 118-150 (282)
54 KOG3750 Inositol phospholipid 30.8 1.4E+02 0.003 25.3 5.4 25 145-169 219-243 (270)
55 PRK06080 1,4-dihydroxy-2-napht 30.6 3.3E+02 0.0072 22.9 15.8 36 135-170 124-161 (293)
56 COG5415 Predicted integral mem 28.1 2.1E+02 0.0046 23.5 5.8 37 131-167 48-86 (251)
57 PF11085 YqhR: Conserved membr 27.0 23 0.0005 27.9 0.2 28 197-224 146-173 (173)
58 PF05297 Herpes_LMP1: Herpesvi 26.9 21 0.00046 30.6 0.0 22 130-151 144-165 (381)
59 PF14362 DUF4407: Domain of un 26.2 3.8E+02 0.0081 22.7 7.6 6 93-98 8-13 (301)
60 PF12084 DUF3561: Protein of u 25.1 2.7E+02 0.0058 20.1 9.2 82 86-167 18-102 (107)
61 PF10389 CoatB: Bacteriophage 25.0 1.4E+02 0.0031 18.1 3.4 21 153-173 24-44 (46)
62 COG5336 Uncharacterized protei 24.4 85 0.0018 22.9 2.7 18 151-168 50-67 (116)
63 PF15086 UPF0542: Uncharacteri 23.7 99 0.0021 20.7 2.7 32 14-46 12-44 (74)
64 PRK11677 hypothetical protein; 23.6 88 0.0019 23.6 2.8 18 153-170 6-23 (134)
65 PF09512 ThiW: Thiamine-precur 23.5 3.4E+02 0.0074 21.0 6.0 87 89-195 24-119 (150)
66 PF13571 DUF4133: Domain of un 22.8 1.7E+02 0.0037 20.8 3.9 72 123-194 16-89 (96)
67 PF06127 DUF962: Protein of un 22.3 2.7E+02 0.0059 19.4 5.0 59 17-81 14-72 (95)
68 COG3476 Tryptophan-rich sensor 21.8 3.9E+02 0.0085 20.9 9.0 86 76-169 37-127 (161)
69 PF06799 DUF1230: Protein of u 21.7 1.8E+02 0.0038 22.3 4.1 12 87-98 18-29 (144)
70 PF15179 Myc_target_1: Myc tar 21.4 1.2E+02 0.0026 24.2 3.3 8 183-190 51-58 (197)
71 KOG1519 Predicted mitochondria 20.1 59 0.0013 26.4 1.3 23 148-170 210-232 (297)
No 1
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=272.42 Aligned_cols=210 Identities=47% Similarity=0.733 Sum_probs=191.2
Q ss_pred CCccceeeEEeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc
Q 027361 5 PLKAVTLTHVRYRKGDQLGHFLAWVSLVPVFISLGGFVSHFIFRREIQGMFFALGLLVSQFINEFIKTTVQQARPEMCVL 84 (224)
Q Consensus 5 ~l~~~d~~~~~~~~~d~~~~~~~~~~~~p~~i~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~ 84 (224)
..++++.|+++|+.+|..+...+++++.|+++.+ ++..+++.+|+.++++.++|.+.++.+|.++|+++++|||+..+.
T Consensus 10 ~~~~v~~thv~y~~~d~~g~~la~~sL~p~~V~~-~f~S~~l~rrEl~a~~~~~G~v~Ne~in~viK~il~qpRP~~~~~ 88 (228)
T KOG3146|consen 10 LEQPVTLTHVEYRIGDVLGHLLAYFSLSPVFVSA-GFLSVFLFRRELAAIWFVIGQVSNEFINVVIKNILKQPRPVSFPD 88 (228)
T ss_pred cccccccceeeeccchHHHHHHHHHHHhHHHHHH-HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 5669999999999999999999999999999999 799999999999999999999999999999999999999988777
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccc-hhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHH
Q 027361 85 LETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWG-IKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILI 163 (224)
Q Consensus 85 ~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~ 163 (224)
.+...++||||.|+|+|+++++|..+.....++... ....++...+.+.++..+++||+|+++|+.+||++|+++|.+.
T Consensus 89 ~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~laLs~~v~~sRVyl~yHt~sQVv~G~ivG~l~ 168 (228)
T KOG3146|consen 89 TTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLLALSFYVCYSRVYLKYHTLSQVVVGAIVGGLV 168 (228)
T ss_pred cccccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhhhhH
Confidence 777799999999999999999999988766554322 2233355557788999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccchhHHhhcccccceeeecCCCCCchhHHHHHHHHHHHH
Q 027361 164 GAGWFWFVNSVLFPYFPAIEESAFGRYFYVKDTSHIPDPLKFEYDNARAARS 215 (224)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rd~~~~~~~~~~~~~~~~~~~~ 215 (224)
+.+|+.+.+.+..|.++|++++|+++++++||+++++|..++|+.++|+++|
T Consensus 169 g~~Wf~~v~slll~~f~~~l~~~i~~ffyi~dt~~~~~~~~fe~~~~~~~~k 220 (228)
T KOG3146|consen 169 GILWFYLVNSLLLGLFPWILSLPISRFFYIKDTSLIPKVLHFEYYVARAWFK 220 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhhhhccccCCchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999885544
No 2
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.96 E-value=1.8e-28 Score=191.89 Aligned_cols=157 Identities=43% Similarity=0.762 Sum_probs=126.1
Q ss_pred eeeEEeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCccccCC
Q 027361 10 TLTHVRYRKGDQLGHFLAWVSLVPVFISLGGFVSHFIFRREIQGMFFALGLLVSQFINEFIKTTVQQARPEMCVLLETCD 89 (224)
Q Consensus 10 d~~~~~~~~~d~~~~~~~~~~~~p~~i~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~~~~~~ 89 (224)
.+++.++++.|.....+.+.+..|+.+.+ ....|..++|+...+..+.+.+.+..++..+|..++||||+..... ++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~~-~~~ 79 (159)
T cd03382 2 SLTHVLYDPGDLLSFLLAYLSLLPVAILV-GYATLILFRRELEAIYLFIGLLANEALNYVLKRIIKEPRPCSGAYF-VRS 79 (159)
T ss_pred CcceEecCCccHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCcC-CCC
Confidence 57889999999999999999999998887 6666666777777777788888888999999999999999865432 458
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHhcccc-chhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHH
Q 027361 90 SHGWPSSHSQYMFFFAVYFTLLTCKGIGLW-GIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWF 168 (224)
Q Consensus 90 ~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~ 168 (224)
++||||||++.+++.++++.+....+.+.. ++..+.....+.+++++++++||+|+|+||++||++|+++|..++.+++
T Consensus 80 ~~SFPSgHa~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~SRvylg~H~~~DVl~G~~lG~~~~~~~~ 159 (159)
T cd03382 80 GYGMPSSHSQFMGFFAVYLLLFIYLRLGRLNSLVSRFLLSLGLLLLALLVSYSRVYLGYHTVSQVVVGAIVGILLGILWF 159 (159)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 999999999887777777765543332211 1234444455677889999999999999999999999999999988764
No 3
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.94 E-value=4.1e-25 Score=176.61 Aligned_cols=168 Identities=22% Similarity=0.301 Sum_probs=117.9
Q ss_pred CCCCccceeeEEeec---CCCchHHHHHHHHHH---HHHHHH-HHHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 027361 3 TPPLKAVTLTHVRYR---KGDQLGHFLAWVSLV---PVFISL-GGFVSHF-IFRREIQGMFFALGLLVSQFINEFIKTTV 74 (224)
Q Consensus 3 ~~~l~~~d~~~~~~~---~~d~~~~~~~~~~~~---p~~i~i-~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~lK~~~ 74 (224)
+.++..+|..+.++. +++.++.++..++.+ +..+.+ .+...+. .+++++....++.+++.+.+++..+|..+
T Consensus 6 ~~~~~~~D~~i~~~~~~~~~~~~~~~~~~it~lg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~ 85 (182)
T cd03392 6 AGWLTAFDQSVLSLLRSLRTPLLTAFMTAITFLGSPAVLLIIVLLLALLLLLKRRRRAALFLLLALLGGGALNTLLKLLV 85 (182)
T ss_pred cchHhhHHHHHHHHHHhcCChHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467788888877774 345667777776643 222211 1112223 33344556667777888888999999999
Q ss_pred hcCCCCCcCccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHH
Q 027361 75 QQARPEMCVLLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVF 154 (224)
Q Consensus 75 ~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl 154 (224)
+||||+..... ...++||||||++.+++++.++...+..+.+ .+..+.....+.++++..+|+||+|+|+||++||+
T Consensus 86 ~r~RP~~~~~~-~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~sRv~lg~H~~sDvl 162 (182)
T cd03392 86 QRPRPPLHLLV-PEGGYSFPSGHAMGATVLYGFLAYLLARRLP--RRRVRILLLILAAILILLVGLSRLYLGVHYPSDVL 162 (182)
T ss_pred cCCCCCCcccC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHcc--hhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 99999865432 4588999999998777776665544433322 12334444446778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 027361 155 SGAILGILIGAGWFWFVNS 173 (224)
Q Consensus 155 ~G~~lG~~~~~~~~~~~~~ 173 (224)
+|+++|..++.+.+..+++
T Consensus 163 ~G~~lG~~~~~~~~~~~~~ 181 (182)
T cd03392 163 AGWLLGLAWLALLILLYRR 181 (182)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999988877654
No 4
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.93 E-value=2e-24 Score=171.91 Aligned_cols=156 Identities=22% Similarity=0.302 Sum_probs=102.4
Q ss_pred ccceeeEEeec----CCCchHHHHHHHHHH----HHHHHHHHHHHHHHhhhhHHHH--H-HHHHHHHHHHHHHHHHHhhh
Q 027361 7 KAVTLTHVRYR----KGDQLGHFLAWVSLV----PVFISLGGFVSHFIFRREIQGM--F-FALGLLVSQFINEFIKTTVQ 75 (224)
Q Consensus 7 ~~~d~~~~~~~----~~d~~~~~~~~~~~~----p~~i~i~~~~~~~~~~r~~~~~--~-~~~~~~~~~~~~~~lK~~~~ 75 (224)
+++|.+..++. +++.++.++..++.. +..+++ .+..+..++++.... . .+...+.+.+++..+|..++
T Consensus 3 ~~~D~~l~~~i~~~~~~~~l~~~~~~it~l~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~ 81 (177)
T cd03395 3 EQIDVWLFLLLNGTLVHPLLDDLMPFLTGKKLSVPIFLLL-ALFILFRKGPIGLLILLLVLLAVGFADQLASGFLKPLVA 81 (177)
T ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHCchhHHHHHHHH-HHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45666655553 245777787777743 222221 222233222222111 1 12233445678899999999
Q ss_pred cCCCCCcCc-------cccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 027361 76 QARPEMCVL-------LETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYH 148 (224)
Q Consensus 76 rpRP~~~~~-------~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H 148 (224)
||||..... .++..++||||||++.+++++..+..... + +... .+..+++.++|+||+|+|+|
T Consensus 82 r~RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~-~--------~~~~-~~~~~~~~~v~~SRvylG~H 151 (177)
T cd03395 82 RLRPCNALDGVRLVVLGDQGGSYSFASSHAANSFALALFIWLFFR-R--------GLFS-PVLLLWALLVGYSRVYVGVH 151 (177)
T ss_pred CCCCCCCccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHHH-H--------HHHH-HHHHHHHHHHHHHHHHhCCc
Confidence 999986531 23568899999999877776666554331 1 1122 25577889999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHh
Q 027361 149 TVAQVFSGAILGILIGAGWFWFVNS 173 (224)
Q Consensus 149 ~~sDVl~G~~lG~~~~~~~~~~~~~ 173 (224)
|++||++|+++|..++.+.+.++++
T Consensus 152 ~psDVl~G~~lG~~~~~~~~~~~~~ 176 (177)
T cd03395 152 YPGDVIAGALIGIISGLLFYLLFSW 176 (177)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988877653
No 5
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.93 E-value=4.5e-24 Score=165.74 Aligned_cols=141 Identities=22% Similarity=0.327 Sum_probs=95.3
Q ss_pred chHHHHHHHHHH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc---cc--cCCCCC
Q 027361 21 QLGHFLAWVSLV---PVFISLGGFVSHFIFRREIQGMFFALGLLVSQFINEFIKTTVQQARPEMCVL---LE--TCDSHG 92 (224)
Q Consensus 21 ~~~~~~~~~~~~---p~~i~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~---~~--~~~~~s 92 (224)
.++.++..++.+ ++++.+ +....+.+++.....++.+.+.+..++..+|..++||||+..+. .. +.+++|
T Consensus 2 ~ld~~~~~it~lg~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~S 79 (151)
T cd03388 2 FLDYYFAFTALLGTHTFYILF--LPFLFWNGDPYVGRDLVVVLALGMYIGQFIKDLFCLPRPSSPPVVRLTMSSAALEYG 79 (151)
T ss_pred hHHHHHHHHHHhcchHHHHHH--HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCchhhhhccccCCCCC
Confidence 345566665543 333322 22222233334455566667777888999999999999986431 11 358899
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 93 WPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 93 fPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
|||||++.+++++.++......+.+ ..++.......++++++++||+|+|+||++||++|+++|++++..+
T Consensus 80 FPSgH~~~a~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~v~~SRvylgvH~p~DVl~G~~lG~~~~~~~ 150 (151)
T cd03388 80 FPSTHAMNATAISFYLLIYLYDRYQ----YPFVLGLILALFYSTLVCLSRIYMGMHSVLDVIAGSLIGVLILLFR 150 (151)
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999998877777666654433221 1233333456778899999999999999999999999999987654
No 6
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.91 E-value=2.9e-23 Score=168.17 Aligned_cols=111 Identities=23% Similarity=0.326 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC----ccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHH
Q 027361 52 QGMFFALGLLVSQFINEFIKTTVQQARPEMCV----LLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFS 127 (224)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~----~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 127 (224)
..+.++.+++++.+++..+|..++||||+... ...+..++||||||++.+++++..+. ...+ +...
T Consensus 60 ~~~~~~~~~~~~~~~~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l--~~~~--------~~~~ 129 (202)
T PRK11837 60 LVIKIAIALAISLLVSWTIGHLFPHDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFL--FWHR--------LWSG 129 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHH--HHHH--------HHHH
Confidence 34556667788888899999999999997532 23346789999999986665543322 1111 1222
Q ss_pred HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHh
Q 027361 128 NVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFVNS 173 (224)
Q Consensus 128 ~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~~~ 173 (224)
.+.+.+++++|+||+|+|+|||+||++|+++|++++.+...+...
T Consensus 130 -~~~~~~a~lva~SRVylGvHypsDVlgG~~lG~~~~~~~~~~~~~ 174 (202)
T PRK11837 130 -SLLMAIAVAIAWSRVYLGVHWPLDMLGALLVGMIGCLSAQIIWQL 174 (202)
T ss_pred -HHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 255678899999999999999999999999999999877655443
No 7
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.91 E-value=8.3e-23 Score=157.42 Aligned_cols=105 Identities=26% Similarity=0.434 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC----ccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHH
Q 027361 53 GMFFALGLLVSQFINEFIKTTVQQARPEMCV----LLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSN 128 (224)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~----~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 128 (224)
.+....+++++.+++..+|..++||||.... ....+.++||||||++.+++++..+. . .+ .++..
T Consensus 35 ~~~~~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgH~~~~~~~~~~l~--~-~~-------~~~~~- 103 (144)
T cd03385 35 VLFATIAVAVALLINYIIGLLYFHPRPFVVGLGHNLLPHAADSSFPSDHTTLFFSIAFSLL--L-RR-------RKWAG- 103 (144)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccccccCCCCCCCCcHHHHHHHHHHHHHH--H-Hh-------hHHHH-
Confidence 4555667777888999999999999997432 22345789999999987665544322 2 11 11222
Q ss_pred HHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHH
Q 027361 129 VLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWF 168 (224)
Q Consensus 129 ~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~ 168 (224)
....+++.++++||+|+|+||++||++|+.+|.+++.+.+
T Consensus 104 ~~~~~~a~~v~~SRvylg~H~~sDVl~G~~lg~~~~~~~~ 143 (144)
T cd03385 104 WILLILALLVAWSRIYLGVHYPLDMLGAALVAVLSALLVF 143 (144)
T ss_pred HHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHh
Confidence 2467888999999999999999999999999999887654
No 8
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.91 E-value=9.7e-23 Score=168.08 Aligned_cols=116 Identities=23% Similarity=0.293 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCC------CcC----------------------------------ccccCCCCCCCC
Q 027361 56 FALGLLVSQFINEFIKTTVQQARPE------MCV----------------------------------LLETCDSHGWPS 95 (224)
Q Consensus 56 ~~~~~~~~~~~~~~lK~~~~rpRP~------~~~----------------------------------~~~~~~~~sfPS 95 (224)
+.++++++..++.++|..++||||+ ... .-+++++|||||
T Consensus 82 l~~~i~~~~~~k~~iK~~~~epRP~v~~l~~~~~~~~~~FY~l~~~~r~~~v~~~~~~~~~~~~w~~~hw~~~~gySFPS 161 (244)
T PRK10699 82 LAAAILVGQGVKSWIKERVQEPRPFVVWLEKTHHIPVDEFYTLKRAERGELVKEQLAEQSNIPQWLRSHWQKETGFAFPS 161 (244)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCchhHHHHHhcCCCHHHHHccCHHHHHHHHHHHHhccccCCHHHHhccCCCCCCCCCh
Confidence 4456777888899999999999994 110 003678999999
Q ss_pred chhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027361 96 SHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFVNSVL 175 (224)
Q Consensus 96 gHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~~~~~ 175 (224)
||++++++++.+....+..+ .+.....+..+++.++++||+|+|+|||+||++|.++|.+++.+.+.+.++..
T Consensus 162 GHa~~a~~~~l~~~~ll~~~-------~~~~~~~~~~~wa~~v~~SRvyLGvH~psDVlaG~llG~~~~~l~~~l~~~~~ 234 (244)
T PRK10699 162 GHTMFAASWALLAVGLLWPR-------RRYKTVALLMLWATGVMGSRLLLGMHWPRDLVVATLISWLLVTVATWLAQRIC 234 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHccCcCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99987665444333323222 12222235677899999999999999999999999999999998888776654
Q ss_pred ccc
Q 027361 176 FPY 178 (224)
Q Consensus 176 ~~~ 178 (224)
.|+
T Consensus 235 ~~~ 237 (244)
T PRK10699 235 GPL 237 (244)
T ss_pred ccc
Confidence 443
No 9
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.90 E-value=4.3e-23 Score=151.04 Aligned_cols=99 Identities=30% Similarity=0.352 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHH
Q 027361 53 GMFFALGLLVSQFINEFIKTTVQQARPEMCVLLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHW 132 (224)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 132 (224)
.-..+.+++++.+++..+|..++||||+. .||||||++.++++++++.+.. + +.......+
T Consensus 10 ~~~~~~~~~~~~~i~~~lK~~~~r~RP~~---------~sFPSgHt~~a~a~a~~l~~~~--~--------~~~~~~~~~ 70 (109)
T cd03383 10 PHVTFVSLLIVIIVVVILKAYFGRGTPLE---------GGMPSGHAAIAFSIATAISLIT--N--------NPIISILSV 70 (109)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCC---------CCCChHHHHHHHHHHHHHHHHH--h--------hHHHHHHHH
Confidence 44455677788889999999999999962 4899999988777766554322 1 112223567
Q ss_pred HHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 027361 133 TLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 133 ~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
+++.++|+||+|+|+||++||++|+++|.+++.+.+.+
T Consensus 71 ~~a~lv~~SRvylg~H~psDVlaG~~lG~~~~~~~~~~ 108 (109)
T cd03383 71 LLAVMVAHSRVEMKIHTMWEVVVGAILGALITLLIFKI 108 (109)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999887754
No 10
>PLN02250 lipid phosphate phosphatase
Probab=99.90 E-value=1.9e-22 Score=172.29 Aligned_cols=118 Identities=22% Similarity=0.321 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc-----------------------cccCCCCCCCCchhHHHHHHHHHHHH
Q 027361 54 MFFALGLLVSQFINEFIKTTVQQARPEMCVL-----------------------LETCDSHGWPSSHSQYMFFFAVYFTL 110 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~-----------------------~~~~~~~sfPSgHa~~~~~~a~~~~l 110 (224)
+.++++++++.+++.++|..++||||+.... ...++..||||||++.+++..+|+.+
T Consensus 101 l~ll~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLsl 180 (314)
T PLN02250 101 LGLLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSL 180 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHHH
Confidence 4466778888889999999999999976320 01235689999999988888888887
Q ss_pred HHHHhccc---cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 027361 111 LTCKGIGL---WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFV 171 (224)
Q Consensus 111 ~~~~~~~~---~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~ 171 (224)
++..+.+. .....|....++.+++++++|+||++++.|+++||++|+++|++++.++|..+
T Consensus 181 yL~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~y~~~ 244 (314)
T PLN02250 181 YLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFCYLQF 244 (314)
T ss_pred HHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 77554431 23345555556778899999999999999999999999999999998887754
No 11
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=99.90 E-value=1.3e-22 Score=163.71 Aligned_cols=138 Identities=20% Similarity=0.266 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC----cc----------------
Q 027361 30 SLVPVFISLGGFVSHFIFRREIQ----GMFFALGLLVSQFINEFIKTTVQQARPEMCV----LL---------------- 85 (224)
Q Consensus 30 ~~~p~~i~i~~~~~~~~~~r~~~----~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~----~~---------------- 85 (224)
..+|+++++ ....+. +++.++ ...++.+++++.+++.++|..++||||+... ..
T Consensus 23 ~~ip~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (193)
T cd03390 23 VGIPLLVII-LISLFF-RRSLWDLHTSLLGLLLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDTLVGIDICCTG 100 (193)
T ss_pred HHHHHHHHH-HHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCcccccccCCCeecCC
Confidence 456777665 222221 222222 3445677788888999999999999996531 00
Q ss_pred ----ccCCCCCCCCchhHHHHHHHHHHHHHHHHhccc---cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHH
Q 027361 86 ----ETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGL---WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAI 158 (224)
Q Consensus 86 ----~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~ 158 (224)
..++.+||||||++.+++.++++.+++..+.+. ..+..+.....+.+++++++|+||+|+|.||++||++|++
T Consensus 101 ~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~SRi~~g~H~~sDVlaG~~ 180 (193)
T cd03390 101 DPGVLKEGRKSFPSGHSSFAFAGLGFLSLYLAGKLHIFDPRGSSWRLLLALLPLLLAILVAVSRTRDYRHHFSDVIAGSL 180 (193)
T ss_pred CHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHH
Confidence 012348999999998888888877766544321 1234455555567889999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 027361 159 LGILIGAGWFW 169 (224)
Q Consensus 159 lG~~~~~~~~~ 169 (224)
+|.+++++.+.
T Consensus 181 lG~~~a~~~~~ 191 (193)
T cd03390 181 IGLIIAYLSYR 191 (193)
T ss_pred HHHHHHHheeE
Confidence 99999988764
No 12
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.90 E-value=4.1e-22 Score=172.83 Aligned_cols=144 Identities=22% Similarity=0.287 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc---------cccCCCCCCCCchhH
Q 027361 29 VSLVPVFISLGGFVSHFIFRREIQGMFFALGLLVSQFINEFIKTTVQQARPEMCVL---------LETCDSHGWPSSHSQ 99 (224)
Q Consensus 29 ~~~~p~~i~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~---------~~~~~~~sfPSgHa~ 99 (224)
+...++++++..+ .++.+++..+..++..++.+..++..+|..++||||...+. .....+|||||||++
T Consensus 15 l~~~~Fyi~~Lp~--l~w~~~~~~~~~lv~ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~ 92 (352)
T PLN02525 15 VVSVPFYTAFLPL--LFWSGHGKLARQMTLLMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTL 92 (352)
T ss_pred HHHHHHHHHHHHH--HHHHccHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHH
Confidence 3344665554222 23333444445555667777788999999999999975431 123578999999999
Q ss_pred HHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHhh
Q 027361 100 YMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFVNSV 174 (224)
Q Consensus 100 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~~~~ 174 (224)
+++++++++..++....+...+..+.....+.+++++++++||+|+|+||++||++|+++|++++.+++.+.+.+
T Consensus 93 nA~av~~~ll~~l~~~~~~~~~~~~~~~~~l~~l~allV~~SRlYLGvH~psDVl~G~~lG~~i~~~~~~~~~~~ 167 (352)
T PLN02525 93 NTVCLSGYLLHYVLSYLQNVDASVIFAGLALFCLLVALVGFGRLYLGMHSPIDIIAGLAIGLVILAFWLTVDEYV 167 (352)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHheeccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888887765544332122233333334567789999999999999999999999999999999888776644
No 13
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.89 E-value=3.2e-22 Score=160.43 Aligned_cols=106 Identities=26% Similarity=0.404 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc---------cccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchh
Q 027361 52 QGMFFALGLLVSQFINEFIKTTVQQARPEMCVL---------LETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIK 122 (224)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~---------~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~ 122 (224)
..+.++.+++.+.+++..+|..++||||+.... .....++||||||++.+++.+.++..... +
T Consensus 70 ~~~~l~~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~~-~------- 141 (186)
T cd03389 70 AGLFLFATVALSGILVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLFP-R------- 141 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHH-H-------
Confidence 455566667778888999999999999975321 11246789999999887777666654331 1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHH
Q 027361 123 NRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFW 169 (224)
Q Consensus 123 ~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~ 169 (224)
.+. ....++.++|+||+|+|+||++||++|+++|.+++.+.+.
T Consensus 142 ~~~----~~~~~~~lv~~SRiylg~H~~sDVl~G~~lG~~~~~~~~~ 184 (186)
T cd03389 142 YRW----AFILLALLIAFSRVIVGAHYPSDVIAGSLLGAVTALALYQ 184 (186)
T ss_pred HHH----HHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 121 3356778999999999999999999999999999887765
No 14
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.89 E-value=1.4e-22 Score=157.09 Aligned_cols=114 Identities=24% Similarity=0.274 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC-----cc-----------------------ccCCCCCCCCchhHHHHHH
Q 027361 53 GMFFALGLLVSQFINEFIKTTVQQARPEMCV-----LL-----------------------ETCDSHGWPSSHSQYMFFF 104 (224)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~-----~~-----------------------~~~~~~sfPSgHa~~~~~~ 104 (224)
...++++++++.+++.++|..++||||+... .. ..+.++||||||++.+++.
T Consensus 6 ~~~~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~ 85 (150)
T cd03384 6 VGVFLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYA 85 (150)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHH
Confidence 3557788889999999999999999996532 00 0346799999999998888
Q ss_pred HHHHHHHHHHhccc-cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHH
Q 027361 105 AVYFTLLTCKGIGL-WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAG 166 (224)
Q Consensus 105 a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~ 166 (224)
++++.+++..+.+. ..+..+.+..++.++++.++++||+|+|+||++||++|+++|++++++
T Consensus 86 ~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~sRv~~~~H~~sDviaG~~lG~~~~~~ 148 (150)
T cd03384 86 AVFLALYLQARLKLRGSRLLRPLLQFLLLALALYVGLSRISDYKHHWSDVLAGALLGSVIALF 148 (150)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 88888777665442 234445666667889999999999999999999999999999998875
No 15
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.89 E-value=4.4e-22 Score=155.72 Aligned_cols=104 Identities=29% Similarity=0.333 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCcC----ccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHH
Q 027361 54 MFFALGLLVSQFINEFIKTTVQQARPEMCV----LLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNV 129 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~----~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 129 (224)
+.++.+.+++.+++.++|..++||||+... .....+++||||||++.+++++.++......+ .... .
T Consensus 50 ~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~--------~~~~-~ 120 (159)
T cd03391 50 VNLLLGLLLDIITVAILKALVRRRRPAYNSPDMLDYVAVDKYSFPSGHASRAAFVARFLLNHLVLA--------VPLR-V 120 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccchhccCCCCCCCchhHHHHHHHHHHHHHHHHHH--------HHHH-H
Confidence 455667777788899999999999997652 11234678999999988777766655433111 1122 3
Q ss_pred HHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHH
Q 027361 130 LHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAG 166 (224)
Q Consensus 130 ~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~ 166 (224)
..+.++.++++||+|+|+|||+||++|+++|++++.+
T Consensus 121 ~~~~~a~~v~~SRvylg~H~psDVlaG~~lG~~~~~~ 157 (159)
T cd03391 121 LLVLWATVVGISRVLLGRHHVLDVLAGAFLGYLEALL 157 (159)
T ss_pred HHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHh
Confidence 5677899999999999999999999999999988765
No 16
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.89 E-value=2e-22 Score=151.66 Aligned_cols=109 Identities=28% Similarity=0.454 Sum_probs=81.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc-----cccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhh
Q 027361 49 REIQGMFFALGLLVSQFINEFIKTTVQQARPEMCVL-----LETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKN 123 (224)
Q Consensus 49 r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~-----~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~ 123 (224)
++.....+..+++++.+++..+|..++||||+.... ..++.++||||||++.+++++..+.... + .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~--~-------~ 81 (125)
T cd03393 11 DKRLGRYLGLALCASGYLNAALKEVFKIPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLHV--R-------K 81 (125)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHHH--H-------H
Confidence 334456677788888999999999999999976542 1356789999999986665544433221 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 124 RWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 124 ~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
++.. .+..+++.++++||+|+|+||++||++|+.+|..++++.
T Consensus 82 ~~~~-~~~~~~~~~v~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 82 KWFT-LIGVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HHHH-HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHh
Confidence 2222 245667889999999999999999999999999988753
No 17
>PLN02731 Putative lipid phosphate phosphatase
Probab=99.89 E-value=3.1e-22 Score=171.59 Aligned_cols=144 Identities=23% Similarity=0.325 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhH-H----HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc--------------
Q 027361 24 HFLAWVSLVPVFISLGGFVSHFIFRREI-Q----GMFFALGLLVSQFINEFIKTTVQQARPEMCVL-------------- 84 (224)
Q Consensus 24 ~~~~~~~~~p~~i~i~~~~~~~~~~r~~-~----~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~-------------- 84 (224)
.+..+..++|+.+++ .+ .. .+|+. . .+.++.+++++.+++.++|..++||||+....
T Consensus 89 ~l~ii~~liPi~iii-~~--~~-~~r~~~~l~~~ilgll~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~ 164 (333)
T PLN02731 89 SVPVYAMLLPLVIFI-FI--YF-RRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGD 164 (333)
T ss_pred HHHHHHHHHHHHhee-ee--ee-ehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCchhhcCcccccccccccc
Confidence 334444566776654 22 12 22222 1 24466778888999999999999999975310
Q ss_pred --------cccCCCCCCCCchhHHHHHHHHHHHHHHHHhccc---cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHH
Q 027361 85 --------LETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGL---WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQV 153 (224)
Q Consensus 85 --------~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDV 153 (224)
.-.++..||||||++++++..+|+.+++..+.+. .....|....++.+++++++|+||++++.|+++||
T Consensus 165 ~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLslyL~~kl~~~~~~~~~~rl~l~~lpll~A~lIalSRV~Dy~Hh~sDV 244 (333)
T PLN02731 165 VICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDV 244 (333)
T ss_pred ceecCchhcccccCCCCCchhHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 0123567999999999999999988877655421 22345555556778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 027361 154 FSGAILGILIGAGWFWFV 171 (224)
Q Consensus 154 l~G~~lG~~~~~~~~~~~ 171 (224)
++|+++|+++++++|..+
T Consensus 245 laG~lLG~~iA~~~Y~~y 262 (333)
T PLN02731 245 FAGGLLGLAISTICYLQF 262 (333)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998888754
No 18
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.89 E-value=1.1e-21 Score=154.93 Aligned_cols=116 Identities=20% Similarity=0.214 Sum_probs=82.5
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCcc--ccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccch
Q 027361 44 HFIFRREIQGMFFALGLLVSQFINEFIKTTVQQARPEMCVLL--ETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGI 121 (224)
Q Consensus 44 ~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~~--~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~ 121 (224)
.+..+++.....++.+++.+.+++..+|..++|+||...... ....++||||||++.+++.+.++. ++..
T Consensus 70 ~l~~~d~~g~~~l~~al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l~----~~~~---- 141 (190)
T PRK09597 70 PLIQRDAIGLFQVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLM----RRYS---- 141 (190)
T ss_pred HHHhccHhHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHHH----HHHc----
Confidence 344455566777888999999999999999999877543321 223449999999987765543322 1111
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 027361 122 KNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 122 ~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
.+... ..+.+++++|+||+|+|+||++||++|+++|++++.++...
T Consensus 142 -~~~~~--~~l~lallVg~SRVYLGvHyPsDVLaG~liGil~~~lf~~~ 187 (190)
T PRK09597 142 -FKKYW--WLLPLIPLTMLARIYLDMHTIGAVLAGLGVGMLCVSLFTSP 187 (190)
T ss_pred -hhHHH--HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11121 22456678999999999999999999999999998876543
No 19
>PLN02715 lipid phosphate phosphatase
Probab=99.89 E-value=2.4e-21 Score=166.06 Aligned_cols=118 Identities=23% Similarity=0.305 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCcC-----------c-----------cccCCCCCCCCchhHHHHHHHHHHHHH
Q 027361 54 MFFALGLLVSQFINEFIKTTVQQARPEMCV-----------L-----------LETCDSHGWPSSHSQYMFFFAVYFTLL 111 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~-----------~-----------~~~~~~~sfPSgHa~~~~~~a~~~~l~ 111 (224)
+.++++++++.+++.++|+.++||||+... . .-.++..||||||++.+++.++|+.++
T Consensus 126 l~l~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl~ 205 (327)
T PLN02715 126 LGLLFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLY 205 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHHH
Confidence 556777888889999999999999997421 0 012467999999999999998888887
Q ss_pred HHHhccc---cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 027361 112 TCKGIGL---WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFV 171 (224)
Q Consensus 112 ~~~~~~~---~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~ 171 (224)
+..+.+. .....|....++.+++++++|+||++++.|+++||++|+++|++++++.|..+
T Consensus 206 L~~kl~~~~~~~~~~k~~l~~lpll~A~lIalSRv~Dy~Hh~sDVlaG~lLG~~~a~~~y~~~ 268 (327)
T PLN02715 206 LSGKIKAFNGEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGILVAAFCYRQF 268 (327)
T ss_pred HHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665432 12344555556778899999999999999999999999999999998887754
No 20
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.88 E-value=3.2e-22 Score=146.37 Aligned_cols=102 Identities=28% Similarity=0.413 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHH
Q 027361 52 QGMFFALGLLVSQFINEFIKTTVQQARPEMCVLLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLH 131 (224)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 131 (224)
..+.++.+++++.+++..+|..++||||+... ..++||||||++.+++++.++.... . .++.. ...
T Consensus 4 ~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~----~~~~sfPSgHa~~a~~~~~~~~~~~--~-------~~~~~-~~~ 69 (106)
T cd03394 4 GLLILAEAAALTAAVTEGLKFAVGRARPDGSN----NGYRSFPSGHTASAFAAATFLQYRY--G-------WRWYG-IPA 69 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCCccCcHHHHHHHHHHHHHHHHH--c-------chHHH-HHH
Confidence 35566778888899999999999999997653 5789999999987776665543222 1 11222 245
Q ss_pred HHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 132 WTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 132 ~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
.+++.++++||+|+|+||++||++|+++|.+++.+.
T Consensus 70 ~~~~~~v~~sRv~~g~H~~sDV~~G~~lG~~~~~~~ 105 (106)
T cd03394 70 YALASLVGASRVVANRHWLSDVLAGAAIGILVGYLV 105 (106)
T ss_pred HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHheeee
Confidence 677889999999999999999999999999987643
No 21
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.87 E-value=2.3e-21 Score=159.70 Aligned_cols=122 Identities=20% Similarity=0.242 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC-----------------ccccCCCCCCCCchhHHHHHHHHHHHH
Q 027361 48 RREIQGMFFALGLLVSQFINEFIKTTVQQARPEMCV-----------------LLETCDSHGWPSSHSQYMFFFAVYFTL 110 (224)
Q Consensus 48 ~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~-----------------~~~~~~~~sfPSgHa~~~~~~a~~~~l 110 (224)
+|+. ...++...+++..+|.++|.+++|+||+... ...|++++||||||++.++++...+..
T Consensus 13 ~~~~-g~~l~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~~ 91 (235)
T cd03381 13 SQSV-GIKLLWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVMVT 91 (235)
T ss_pred chHH-HHHHHHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHHHH
Confidence 4443 3444444555555899999999999996520 235678999999999655444333332
Q ss_pred HHHHhc--cccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 027361 111 LTCKGI--GLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 111 ~~~~~~--~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
.+.... +..++..+.....+...+.+++|+||+|+|+|||+||++|+++|+.++......
T Consensus 92 ~l~~~~~~r~~~~~~~~~~~~~~~~~~~~V~~SRvYLgvHfpsDVlaG~~lGi~~~~~~~~~ 153 (235)
T cd03381 92 ALLSHLAGRKRSRFLRVMLWLVFWGVQLAVCLSRIYLAAHFPHQVIAGVISGIAVAETFSHI 153 (235)
T ss_pred HHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 222221 111233455555566778888999999999999999999999999988766543
No 22
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.85 E-value=2e-20 Score=151.40 Aligned_cols=113 Identities=15% Similarity=0.151 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC---------------ccccCCCCCCCCchhHHHHHHHHHHHHHHHHhcc
Q 027361 53 GMFFALGLLVSQFINEFIKTTVQQARPEMCV---------------LLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIG 117 (224)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~---------------~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~ 117 (224)
.+.+++++..+.+++..+|..++||||.... ...+..++||||||++.++++++.. ++..+.
T Consensus 69 ~~~~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~af~~~~~~--~~~~~~- 145 (197)
T cd03396 69 LLLLILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAGFALLALY--FLFRRR- 145 (197)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHHHHHHHHH--HHHHHh-
Confidence 4556677777888899999999999996531 1345678999999998666554332 222221
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 027361 118 LWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
.+..++....+.++++.++|+||+|.|.||+|||++|+.+|.+++.+.+.+
T Consensus 146 --~~~~~~~~~~~~~~~~~~vg~sRi~~G~Hf~SDvl~g~~ig~~~~~~~~~~ 196 (197)
T cd03396 146 --RPRLARLVLAAGLALGALMGLARMARGAHFLSDVLWSLLLVWLIALLLYRL 196 (197)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 122344444567788999999999999999999999999999999988764
No 23
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.83 E-value=1.2e-19 Score=134.59 Aligned_cols=104 Identities=34% Similarity=0.482 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCc----------CccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHH
Q 027361 58 LGLLVSQFINEFIKTTVQQARPEMC----------VLLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFS 127 (224)
Q Consensus 58 ~~~~~~~~~~~~lK~~~~rpRP~~~----------~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 127 (224)
.+.+.+.+++..+|..++||||+.. ....+..++||||||++.+++.+.++......+.+ +...
T Consensus 2 ~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~------~~~~ 75 (116)
T smart00014 2 LLAVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPARAA------RKLL 75 (116)
T ss_pred hHHHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHHhh------hHHH
Confidence 3467788899999999999999642 13345688999999999888777777665544321 2223
Q ss_pred HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 128 NVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 128 ~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
......++.++++||+|+|.||++||++|+.+|..++.++
T Consensus 76 ~~~~~~~~~~~~~sRi~~g~H~~~Dv~~G~~lG~~v~~~~ 115 (116)
T smart00014 76 IILLLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAVL 115 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHc
Confidence 3467888999999999999999999999999999988653
No 24
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=99.82 E-value=7.6e-19 Score=149.97 Aligned_cols=120 Identities=25% Similarity=0.326 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC--------------------ccccCC---------CCCCCCchhHHHH
Q 027361 52 QGMFFALGLLVSQFINEFIKTTVQQARPEMCV--------------------LLETCD---------SHGWPSSHSQYMF 102 (224)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~--------------------~~~~~~---------~~sfPSgHa~~~~ 102 (224)
....++++++++.+++.++|..++|+||+... ...|.+ ..||||||+++++
T Consensus 111 ~~~~~lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~ 190 (317)
T KOG3030|consen 111 FVGVFLFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFSF 190 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHHH
Confidence 34567888999999999999999999996432 112222 3699999999999
Q ss_pred HHHHHHHHHHHHhccc--cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 027361 103 FFAVYFTLLTCKGIGL--WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFV 171 (224)
Q Consensus 103 ~~a~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~ 171 (224)
+.++|+.+++..+... ..+..|...+++.+++++++|+|||-...|+++||++|+++|+++|++.+...
T Consensus 191 y~~~flalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v 261 (317)
T KOG3030|consen 191 YAMGFLALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYV 261 (317)
T ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999888665432 36778888888999999999999999999999999999999999999887654
No 25
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.77 E-value=4e-17 Score=132.22 Aligned_cols=121 Identities=27% Similarity=0.338 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--hhhcCCCCCcC-ccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHH
Q 027361 51 IQGMFFALGLLVSQFINEFIKT--TVQQARPEMCV-LLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFS 127 (224)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~lK~--~~~rpRP~~~~-~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 127 (224)
................+..+|. .+.+|||.... ....+.++||||||++.+++.+.++........... .++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~---~~~~~ 167 (232)
T COG0671 91 ALALKLLVGLPRPLIVLSALKTWHIFARPRPGLLVALVLGASGYSFPSGHAAGAAAAALLLALLLPLRRALL---RRVLL 167 (232)
T ss_pred HHHHHHHHHhHHHHHHHHHHhccccccCCCCcchhccccCcccCCCCChhHHHHHHHHHHHHHHHHHHHhhh---hHHHH
Confidence 3455566666777778888897 89999997554 233358899999999877777777766554332211 34455
Q ss_pred HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHhh
Q 027361 128 NVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFVNSV 174 (224)
Q Consensus 128 ~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~~~~ 174 (224)
.....+++.++++||+|+|+||++||++|.++|..++.++....+..
T Consensus 168 ~~~~~~~~~lv~~SRv~lGvH~~~DVi~G~~~g~~~~~~~~~~~~~~ 214 (232)
T COG0671 168 LILLLLLAALVGLSRVYLGVHYPSDVIGGALLGALAALLLLLLLRPL 214 (232)
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHhhHHHHHHHHHHHHHHHhcc
Confidence 55788899999999999999999999999999999999988876543
No 26
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.76 E-value=2.2e-17 Score=122.12 Aligned_cols=106 Identities=33% Similarity=0.514 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCcC--------ccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHH
Q 027361 56 FALGLLVSQFINEFIKTTVQQARPEMCV--------LLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFS 127 (224)
Q Consensus 56 ~~~~~~~~~~~~~~lK~~~~rpRP~~~~--------~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 127 (224)
.......+..++..+|..+.++||.... ...+..++||||||++.+++++.++........ .+...
T Consensus 8 ~~~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~------~~~~~ 81 (122)
T cd01610 8 LLLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPRRL------LRLLL 81 (122)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHH------HHHHH
Confidence 3344445555789999999999997643 123567899999999877777666655442211 12233
Q ss_pred HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 128 NVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 128 ~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
......++..+++||+++|.||++|+++|.++|..++...
T Consensus 82 ~~~~~~~~~~~~~sri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 82 GLLLLLLALLVGLSRVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 4467889999999999999999999999999999988654
No 27
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.74 E-value=2.8e-18 Score=128.87 Aligned_cols=115 Identities=25% Similarity=0.372 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc----cc-----cCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhh
Q 027361 53 GMFFALGLLVSQFINEFIKTTVQQARPEMCVL----LE-----TCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKN 123 (224)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~----~~-----~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~ 123 (224)
.+.++.+++.+..++..+|..+++|||..... .. ...++||||||++.+++.+.++......+. ..
T Consensus 2 ~~~~~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~-----~~ 76 (129)
T PF01569_consen 2 LLALLFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFAFFLAYYLGSRG-----WI 76 (129)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHHHHHHHHCCCCH-----HH
T ss_pred ccccccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHHhhhhhhhhccc-----cc
Confidence 34567778888888999999999999965421 00 012579999999766666555443331111 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 027361 124 RWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFVN 172 (224)
Q Consensus 124 ~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~~ 172 (224)
+.........++.+++++|+|.|.||++|+++|+++|..++.+.....+
T Consensus 77 ~~~~~~~~~~~~~~v~~srv~~g~H~~~Dvi~G~~lg~~~~~~~~~~~~ 125 (129)
T PF01569_consen 77 RILLFLLAIVLAFLVALSRVYLGAHFFSDVIAGILLGILIAYLFYRVYK 125 (129)
T ss_dssp SEEHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHCCHCH
T ss_pred cchhhHHHHHHHHHhhcCEEEcCeEehHHHHHHHHHHHHHHHHHHHHhc
Confidence 0123336778899999999999999999999999999999888766543
No 28
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.69 E-value=4.2e-16 Score=127.19 Aligned_cols=97 Identities=24% Similarity=0.162 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCcC------cc----ccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHH
Q 027361 58 LGLLVSQFINEFIKTTVQQARPEMCV------LL----ETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFS 127 (224)
Q Consensus 58 ~~~~~~~~~~~~lK~~~~rpRP~~~~------~~----~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 127 (224)
.++.-+.+++..+|..++|+||.... .. ....+.||||||++.+++.+..+..++..+ + .
T Consensus 100 ~a~~da~~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~l~~~~~~~---------~-~ 169 (209)
T cd03380 100 RALTDAGIATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAAALVLAELFPER---------A-A 169 (209)
T ss_pred HHHHHHHHHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHH---------H-H
Confidence 33444555689999999999997643 11 345789999999988777777666555321 1 1
Q ss_pred HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHH
Q 027361 128 NVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAG 166 (224)
Q Consensus 128 ~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~ 166 (224)
....++..++.||||.|+||++||++|..+|..++..
T Consensus 170 --~~~~~a~~~~~SRv~~G~H~~sDv~aG~~lG~~i~~~ 206 (209)
T cd03380 170 --ELLARAAEAGNSRVVAGVHWPSDVEAGRILGEAIAAA 206 (209)
T ss_pred --HHHHHHHHHHHHhhhCCeecHHHHHHHHHHHHHHHHH
Confidence 2356788999999999999999999999999987753
No 29
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=99.68 E-value=8.9e-16 Score=127.07 Aligned_cols=90 Identities=18% Similarity=0.134 Sum_probs=66.8
Q ss_pred HHHHHHHhhhcCCCCCcCc---------cccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHH
Q 027361 66 INEFIKTTVQQARPEMCVL---------LETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAV 136 (224)
Q Consensus 66 ~~~~lK~~~~rpRP~~~~~---------~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (224)
.+..+|..++|+||+.... .....++||||||++.+++.+..+...+..+. . ..+..+.
T Consensus 116 ~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~~-------~-----~l~~~a~ 183 (232)
T cd03397 116 ATYPAKKYYNRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPERA-------D-----EILARGS 183 (232)
T ss_pred HHHHHHhhhCCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-------H-----HHHHHHH
Confidence 3789999999999976431 11346799999999877766655554442221 1 2345677
Q ss_pred HHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 137 LTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 137 lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
.+|.||||.|+||++||++|.++|..+....
T Consensus 184 ~~g~SRv~~GvH~psDV~aG~~lG~~~~a~l 214 (232)
T cd03397 184 EYGQSRIVCGVHWPSDVMGGRIMAAALVAAL 214 (232)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999998765433
No 30
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=99.68 E-value=9.9e-16 Score=115.79 Aligned_cols=110 Identities=24% Similarity=0.253 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC-c---cccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHH
Q 027361 53 GMFFALGLLVSQFINEFIKTTVQQARPEMCV-L---LETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSN 128 (224)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~-~---~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 128 (224)
.+.+.+++.+..+...++|.+++|.||.... . -...+-|||||||++.++..+.+........ -....
T Consensus 66 Lv~llLgLlfDli~vaivk~~f~R~rP~~t~pS~l~~~t~DiYsFPsGHaSRaamv~~~~l~~a~~a--------~Plyv 137 (189)
T KOG4268|consen 66 LVNLLLGLLFDLITVAIVKKLFKRRRPYETSPSLLDYLTMDIYSFPSGHASRAAMVSKFFLSHAVLA--------VPLYV 137 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHhc--------cchhH
Confidence 4567888999999999999999999996652 1 1112669999999998877766544333222 11222
Q ss_pred HHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 027361 129 VLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 129 ~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
+..+.++.++|+||+.+|.||.+||++|+.+|.+-+.+...+
T Consensus 138 ~l~~~walvvglSRv~lGRHyvtDVlaG~fiGylearl~l~~ 179 (189)
T KOG4268|consen 138 LLLVLWALVVGLSRVMLGRHYVTDVLAGFFIGYLEARLVLLV 179 (189)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999877766554
No 31
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=99.60 E-value=1.4e-14 Score=123.81 Aligned_cols=154 Identities=20% Similarity=0.275 Sum_probs=106.7
Q ss_pred CCCchHHHHHHHHHH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcCc------cccC
Q 027361 18 KGDQLGHFLAWVSLV---PVFISLGGFVSHFIFRREIQGMFFALGLLVSQFINEFIKTTVQQARPEMCVL------LETC 88 (224)
Q Consensus 18 ~~d~~~~~~~~~~~~---p~~i~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~------~~~~ 88 (224)
++.+++-++.+.+.+ ++++++ +..+.+......+--+....+.+.-+.+.+|..+.-|||...+. ....
T Consensus 77 rn~fld~yF~yts~lGsh~FYilf--LP~~~W~g~~~ltrdm~~i~~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~ 154 (407)
T KOG2822|consen 77 RNPFLDVYFSYTSLLGSHVFYILF--LPFPFWNGDPYLTRDMTYIWVLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTT 154 (407)
T ss_pred cCchHHhhhhhhhhhcchhhheee--hhhHHhcCChhHhhHHHHHHHHHHHHhhhhhheeecCCCCCCCeEEEEeccchh
Confidence 455556555555544 455543 33344433333333444445666778899999999999977661 1245
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHH
Q 027361 89 DSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWF 168 (224)
Q Consensus 89 ~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~ 168 (224)
.+|||||.|++++.+...++.+.+ ......+...+.++....+.+..+++++|+|.|+|..-|+++|.++|+++..+.+
T Consensus 155 ~EYG~PStHt~natais~~~~~~l-s~~d~~s~p~~~lgl~lv~~y~~lv~lgRiY~GMHgvlDi~sG~ligvl~~~~~~ 233 (407)
T KOG2822|consen 155 KEYGMPSTHTMNATAISFYFFLVL-STMDRESYPIQYLGLSLVLLYYALVCLGRIYCGMHGVLDIVSGLLIGVLILILRY 233 (407)
T ss_pred hhhCCCcchhhhhhHHHHHHHHHH-HHhchhhhHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHhhhHHHHHHhhhhh
Confidence 789999999998888887763322 2222122223455555677888999999999999999999999999999999998
Q ss_pred HHHHhh
Q 027361 169 WFVNSV 174 (224)
Q Consensus 169 ~~~~~~ 174 (224)
.+...+
T Consensus 234 ~~~~~~ 239 (407)
T KOG2822|consen 234 PFVDFI 239 (407)
T ss_pred hHHHhc
Confidence 887665
No 32
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=99.56 E-value=3.2e-14 Score=117.93 Aligned_cols=107 Identities=24% Similarity=0.123 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCc-------------------CccccCCCCCCCCchhHHHHHHHHHHHHHHHHhcccc
Q 027361 59 GLLVSQFINEFIKTTVQQARPEMC-------------------VLLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLW 119 (224)
Q Consensus 59 ~~~~~~~~~~~lK~~~~rpRP~~~-------------------~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~ 119 (224)
++.-+.+.++..|..++|+||... +........||||||++++++++..+..++.......
T Consensus 94 a~~da~ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a~a~a~vL~~~~~~~~~~~ 173 (232)
T cd03398 94 AMTDAGIAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFAGAAATVLKALFGSDKVPD 173 (232)
T ss_pred HHHHHHHHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 333345678899999999999642 1123346799999999887777776665553321100
Q ss_pred -----------chhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 120 -----------GIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 120 -----------~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
....+.. .....++..++.||+|.|+||++||++|..+|..++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~SRvy~GvH~~sDv~~G~~lG~~va~~v 230 (232)
T cd03398 174 TVSEPDEGGPSTGVTRVW--AELNELADEVAISRVYAGVHFRSDDAAGAALGEQIGAAA 230 (232)
T ss_pred CccccccCCCCCCCcccH--hHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHHH
Confidence 0001112 134567889999999999999999999999999887653
No 33
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=99.48 E-value=4.6e-12 Score=101.59 Aligned_cols=69 Identities=22% Similarity=0.254 Sum_probs=49.4
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHH
Q 027361 88 CDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGW 167 (224)
Q Consensus 88 ~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 167 (224)
...++|||+|++.++..+..+.... .++.. .+..++++++++||+|+|.||+.||++|.++|.++..+.
T Consensus 114 ~~~~~fPS~H~~~a~~~~~~~~~~~----------~~~~~-~~~~~~~~~i~~s~v~~~~H~~~Dv~~G~~l~~~~~~~~ 182 (186)
T cd03386 114 NPFNAFPSLHVAWAVLAALFLWRHR----------RRLLR-WLAVLWPLLIWLSTLYLGNHYFIDLVGGIALALLSFYLA 182 (186)
T ss_pred CCcceeCcHHHHHHHHHHHHHHHHH----------HHHHH-HHHHHHHHHHHHHHHHHCCccHHHHHHHHHHHHHHHHHh
Confidence 3668999999976554443332111 11122 356778889999999999999999999999988765543
No 34
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only]
Probab=98.70 E-value=4.3e-07 Score=71.99 Aligned_cols=114 Identities=16% Similarity=0.240 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcC---------------ccccCCCCCCCCchhHHHHHHHHHHHHHHHHhcc
Q 027361 53 GMFFALGLLVSQFINEFIKTTVQQARPEMCV---------------LLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIG 117 (224)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~---------------~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~ 117 (224)
...++.++..+..+...+|.......|-+.. +.....+..||-||++..++. +..++..+.
T Consensus 109 ~ayvf~~~~L~~s~i~~lKalta~~CPWdLv~yGG~~~~~~L~~~rpp~~~pGhCfPgGHASsGfa~--~aLfFa~~~-- 184 (249)
T COG3907 109 SAYVFVTLVLSTSLISLLKALTAMDCPWDLVRYGGGFPFIGLFESRPPLKAPGHCFPGGHASSGFAW--VALFFAAWG-- 184 (249)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHhCCCCcceEeecCCCCCCCCCCcCCCCCccccHHH--HHHHHHHcc--
Confidence 4566777888888999999999999993211 222346778999999743322 222222221
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 027361 118 LWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFV 171 (224)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~ 171 (224)
..+..++....+++..+.+.++||+..|.|++|.-+....+-.++++..|+++
T Consensus 185 -~~Prla~l~l~~g~~~G~l~g~sq~lrGAHFLsHnLWs~~~~WLv~Lg~f~l~ 237 (249)
T COG3907 185 -VCPRLAWLGLMIGLVAGLLFGISQQLRGAHFLSHNLWSLTICWLVALGFFYLF 237 (249)
T ss_pred -cChHHHHHHHHHHHHHHHHHhHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHh
Confidence 23556777777889999999999999999999999999888888887777664
No 35
>PF14378 PAP2_3: PAP2 superfamily
Probab=98.60 E-value=2.7e-06 Score=68.36 Aligned_cols=64 Identities=33% Similarity=0.596 Sum_probs=43.5
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHH
Q 027361 91 HGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIG 164 (224)
Q Consensus 91 ~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~ 164 (224)
.+|||.|++.+...+. .. .+.+ ..++.. .+..++..++.+|=++.|.||.-|+++|.+++.+..
T Consensus 126 ~afPSlH~a~a~l~~~----~~-~~~~----~~~~~~-~~~~~~~~~i~~stv~~~~HY~iDv~aG~~la~~~~ 189 (191)
T PF14378_consen 126 AAFPSLHVAWAVLCAL----AL-WRVG----RPRWLR-ALFLAFNVLILFSTVYTGQHYVIDVIAGAALALLAI 189 (191)
T ss_pred cccCchHHHHHHHHHH----HH-HHcc----ccHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 3799999964332221 12 1211 122222 256778889999999999999999999999987653
No 36
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.36 E-value=5.9e-06 Score=62.12 Aligned_cols=106 Identities=29% Similarity=0.399 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCcCccccCCCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHH
Q 027361 57 ALGLLVSQFINEFIKTTVQQARPEMCVLLETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAV 136 (224)
Q Consensus 57 ~~~~~~~~~~~~~lK~~~~rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (224)
+.+.+++.+..+.+|..+.--|-.-.+..-.....||||+|++...++++-..+-.... + +.+. ++..+++
T Consensus 13 llsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~d----S---~lFa--iA~vfai 83 (153)
T COG1963 13 LLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLD----S---PLFA--IAAVFAI 83 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCC----C---chHH--HHHHHHH
Confidence 34455556667777777642222111111112456999999987777766555433221 1 1111 2233333
Q ss_pred HHHHH----h----------------h-------------hcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 027361 137 LTMYS----R----------------V-------------YLGYHTVAQVFSGAILGILIGAGWFWFV 171 (224)
Q Consensus 137 lv~~s----R----------------v-------------~lg~H~~sDVl~G~~lG~~~~~~~~~~~ 171 (224)
.+.+. | + .+--|+|.+|++|.++|++++++.+.+.
T Consensus 84 Ivm~DA~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~~~ 151 (153)
T COG1963 84 IVMYDATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYAFF 151 (153)
T ss_pred HHhhhhhhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 33221 1 0 2346999999999999999999888754
No 37
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=98.28 E-value=3.2e-06 Score=64.23 Aligned_cols=53 Identities=30% Similarity=0.323 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhhhc--CCCCCcCccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 027361 58 LGLLVSQFINEFIKTTVQQ--ARPEMCVLLETCDSHGWPSSHSQYMFFFAVYFTLLT 112 (224)
Q Consensus 58 ~~~~~~~~~~~~lK~~~~r--pRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~ 112 (224)
.+.+++.++.+++|..+.. .|..... ..-..-||||+|++...++++...+..
T Consensus 8 ~~a~~a~~~AQ~iK~~~~~~~~r~~d~~--~~~~sGGMPSSHSA~V~aLat~ig~~~ 62 (141)
T PF02681_consen 8 IAALIAWFIAQFIKVFINYLKERKWDWR--RFFSSGGMPSSHSATVSALATAIGLQE 62 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccHH--HHhhcCCCCchHHHHHHHHHHHHHHHh
Confidence 3444555566666666542 2222211 112556999999988888777766544
No 38
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=96.66 E-value=0.0098 Score=40.32 Aligned_cols=63 Identities=13% Similarity=0.056 Sum_probs=33.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHH
Q 027361 93 WPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILI 163 (224)
Q Consensus 93 fPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~ 163 (224)
+.|||++.+...+.+..-+. .+ .....|.......+....++ +..+.||--||+.|..+...+
T Consensus 6 iFSGHt~~~~l~~l~~~~y~-~~---~~~~~~~~~~~~~~~~~~~i----i~sr~HYTvDV~~a~~it~~~ 68 (74)
T PF14360_consen 6 IFSGHTAFLTLCALFWWEYS-PR---RFWVLKVIMWLLAIIGSFLI----IASRKHYTVDVVLAYYITSLV 68 (74)
T ss_pred EEchhHHHHHHHHHHHHHHc-cc---chhHHHHHHHHHHHHHHHHH----HHcCCCceeehhhHHHHHHHH
Confidence 67999974443322222111 11 01113333333333333444 444599999999999986543
No 39
>KOG3058 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.75 E-value=7 Score=34.31 Aligned_cols=59 Identities=20% Similarity=0.199 Sum_probs=31.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHH
Q 027361 93 WPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAIL 159 (224)
Q Consensus 93 fPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~l 159 (224)
+-|||+.....++.+..-+..++ ....+++..++.+.-.+++-.| +.||--||+.++-+
T Consensus 211 mfSGHTlvl~~~~l~~~eY~pr~----~~~L~~i~wll~~~gi~~il~s----r~HYTIDVvvAyyi 269 (351)
T KOG3058|consen 211 MFSGHTLVLTLTALFITEYSPRR----FIILHWISWLLAFVGIFLILAS----RKHYTIDVVVAYYI 269 (351)
T ss_pred eeecchHHHHHHHHHHHHhcccc----hhHHHHHHHHHHHHHHHHHHHh----CCceeEEEEEehhh
Confidence 67999964443333322222211 1223333333333344444444 49999999999887
No 40
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=79.18 E-value=10 Score=31.55 Aligned_cols=28 Identities=25% Similarity=0.488 Sum_probs=20.7
Q ss_pred HHHHHhhhcCCCChHHHHHHHHHHHHHHHH
Q 027361 137 LTMYSRVYLGYHTVAQVFSGAILGILIGAG 166 (224)
Q Consensus 137 lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~ 166 (224)
.....-+| .|++.+=+.|.++|.+..++
T Consensus 209 mll~T~iy--FHT~~EKl~Gl~~g~~~~~~ 236 (238)
T PF10261_consen 209 MLLMTSIY--FHTILEKLSGLLFGYLGWYI 236 (238)
T ss_pred HHHHHHHH--HCCHHHHHHHHHHHHHhhee
Confidence 33444455 89999999999998876544
No 41
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=59.94 E-value=1.8e+02 Score=28.56 Aligned_cols=9 Identities=11% Similarity=0.586 Sum_probs=4.5
Q ss_pred CCCCCCCch
Q 027361 89 DSHGWPSSH 97 (224)
Q Consensus 89 ~~~sfPSgH 97 (224)
.+.++|+|+
T Consensus 329 ~gf~~p~~~ 337 (843)
T PF09586_consen 329 NGFSYPNGF 337 (843)
T ss_pred hCCcccccc
Confidence 345555533
No 42
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=50.30 E-value=1.1e+02 Score=23.22 Aligned_cols=52 Identities=21% Similarity=0.295 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh--cCCCCCcC---ccccCCCCCCCCchhHHHHHHH
Q 027361 54 MFFALGLLVSQFINEFIKTTVQ--QARPEMCV---LLETCDSHGWPSSHSQYMFFFA 105 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~lK~~~~--rpRP~~~~---~~~~~~~~sfPSgHa~~~~~~a 105 (224)
..+.++..++..+..-+...-+ .+||.+.+ ..+..+..+|-|-||---..++
T Consensus 39 ~aL~ls~~l~~mig~yl~~~~rr~~~rPED~~daEI~dgAGe~GfFsP~SwWPl~la 95 (137)
T PF12270_consen 39 VALVLSGGLALMIGFYLRFTARRIGPRPEDREDAEIADGAGELGFFSPHSWWPLVLA 95 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCCcCcCCCccHhHHHHH
Confidence 3344444444444333333332 58886654 3344577999999985444433
No 43
>PRK14792 lipoprotein signal peptidase; Provisional
Probab=44.36 E-value=1.5e+02 Score=23.01 Aligned_cols=19 Identities=11% Similarity=0.198 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHhhhcCC
Q 027361 60 LLVSQFINEFIKTTVQQAR 78 (224)
Q Consensus 60 ~~~~~~~~~~lK~~~~rpR 78 (224)
.++..++-+..|..+.+..
T Consensus 15 ~~~~~~lDq~tK~~v~~~l 33 (159)
T PRK14792 15 SILIVLLDQFSKYLASSQL 33 (159)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3344456777887766543
No 44
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=42.59 E-value=26 Score=26.14 Aligned_cols=19 Identities=21% Similarity=0.337 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 027361 153 VFSGAILGILIGAGWFWFV 171 (224)
Q Consensus 153 Vl~G~~lG~~~~~~~~~~~ 171 (224)
+++|+++|+++|++...+.
T Consensus 2 ~~i~lvvG~iiG~~~~r~~ 20 (128)
T PF06295_consen 2 AIIGLVVGLIIGFLIGRLT 20 (128)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 5788899998888877764
No 45
>PF13373 DUF2407_C: DUF2407 C-terminal domain
Probab=38.01 E-value=44 Score=25.44 Aligned_cols=24 Identities=13% Similarity=0.276 Sum_probs=20.4
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHH
Q 027361 146 GYHTVAQVFSGAILGILIGAGWFW 169 (224)
Q Consensus 146 g~H~~sDVl~G~~lG~~~~~~~~~ 169 (224)
..+...|.+.|.++|++++++...
T Consensus 85 ~~~~~~dlL~G~liGff~g~~~~~ 108 (140)
T PF13373_consen 85 NSGHNDDLLWGLLIGFFFGLFSLF 108 (140)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHH
Confidence 456778999999999999999843
No 46
>TIGR03546 conserved hypothetical protein TIGR03546. Members of this family are uncharacterized proteins, usually encoded by a gene adjacent to a member of family TIGR03545, which is also uncharacterized.
Probab=37.13 E-value=47 Score=25.73 Aligned_cols=36 Identities=8% Similarity=0.148 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc----cchhHHhhcccc
Q 027361 153 VFSGAILGILIGAGWFWFVNSVLF----PYFPAIEESAFG 188 (224)
Q Consensus 153 Vl~G~~lG~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 188 (224)
+++|.+.|++.+...|.+...+.. ...+|+.+.++.
T Consensus 110 ~~Gg~l~Gli~~~~~Y~ls~~lI~~Yr~~~~~~~~~~~~~ 149 (154)
T TIGR03546 110 VMGSFVVGLILLPPAFAISKVIIAKYRKRIVAWVNKFKIV 149 (154)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 888889999999988888766532 334444444443
No 47
>PF02936 COX4: Cytochrome c oxidase subunit IV; InterPro: IPR004203 Cytochrome c oxidase, a 13 sub-unit complex (1.9.3.1 from EC) is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit IV. The Dictyostelium discoideum (Slime mould) member of this family is called COX VI. The Saccharomyces cerevisiae protein YGX6_YEAST appears to be the yeast COX IV subunit.; GO: 0004129 cytochrome-c oxidase activity; PDB: 3ABK_Q 3AG1_Q 3ASN_Q 1OCZ_D 2EIN_Q 2OCC_D 2YBB_O 3AG3_D 1OCO_Q 1V55_Q ....
Probab=32.99 E-value=1.9e+02 Score=21.95 Aligned_cols=66 Identities=17% Similarity=0.237 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHhhcccccceeeecCCCCCchhHHHHHHHH
Q 027361 132 WTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFVNSVLFPYFPAIEESAFGRYFYVKDTSHIPDPLKFEYDNAR 211 (224)
Q Consensus 132 ~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rd~~~~~~~~~~~~~~~~ 211 (224)
.-+++.--..|.-.+.-...-|++|.++++.++.+.+.+.+.... ...|..+..||+.+.
T Consensus 56 Y~isFg~~g~r~~~~~gewk~v~~~~~~~i~~s~~l~~~~r~~~~--------------------~~~P~T~~~Ew~ea~ 115 (142)
T PF02936_consen 56 YRISFGQTGPRMKAPTGEWKKVFGGVFIFIGFSVLLFIWQRSYVY--------------------PPLPHTFSKEWQEAQ 115 (142)
T ss_dssp HHHH-SS-HHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-------------------------GGGSHHHHHHH
T ss_pred HHhhhcCcccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhC--------------------CCCCCCcCHHHHHHH
Confidence 334445556676666666667999999999888888887664321 123445667887765
Q ss_pred HHHHhh
Q 027361 212 AARSSA 217 (224)
Q Consensus 212 ~~~~~~ 217 (224)
.+|-+.
T Consensus 116 ~~~m~~ 121 (142)
T PF02936_consen 116 NERMLD 121 (142)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 48
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=32.89 E-value=2.3e+02 Score=22.13 Aligned_cols=8 Identities=0% Similarity=0.156 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 027361 152 QVFSGAIL 159 (224)
Q Consensus 152 DVl~G~~l 159 (224)
+.+++++.
T Consensus 156 ~~~aa~~~ 163 (193)
T PF06738_consen 156 EFIAAFLA 163 (193)
T ss_pred HHHHHHHH
Confidence 33333333
No 49
>PF11808 DUF3329: Domain of unknown function (DUF3329); InterPro: IPR021766 This family of proteins are functionally uncharacterised. This family is only found in bacteria. ; GO: 0004673 protein histidine kinase activity
Probab=32.42 E-value=1.4e+02 Score=20.64 Aligned_cols=7 Identities=29% Similarity=0.026 Sum_probs=2.8
Q ss_pred HHHHHHH
Q 027361 133 TLAVLTM 139 (224)
Q Consensus 133 ~~~~lv~ 139 (224)
+.++++|
T Consensus 17 l~~~lvG 23 (90)
T PF11808_consen 17 LAAALVG 23 (90)
T ss_pred HHHHHHH
Confidence 3334444
No 50
>COG0597 LspA Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]
Probab=32.21 E-value=2.5e+02 Score=22.02 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=17.8
Q ss_pred HHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 027361 138 TMYSRVYLGYHTVAQVFSGAILGILIGAGWFWFV 171 (224)
Q Consensus 138 v~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~~ 171 (224)
.-+.|.....| ...+-.|.++|-.+|-+.=++.
T Consensus 85 ~~l~~~~~~~~-~~~i~~~lIigGAlGN~iDR~~ 117 (167)
T COG0597 85 YFLIRLKKSRK-LYAIALALIIGGALGNLIDRLF 117 (167)
T ss_pred HHHHHhhcccH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 33344444444 5666666777666666544443
No 51
>PRK10726 hypothetical protein; Provisional
Probab=31.27 E-value=2e+02 Score=20.67 Aligned_cols=83 Identities=10% Similarity=0.078 Sum_probs=41.6
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHHHHHhccc---cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHH
Q 027361 86 ETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGL---WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGIL 162 (224)
Q Consensus 86 ~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~ 162 (224)
.++..+|+|-|-+-+.+...++..-++....+. .--.++.......+...+.++++.+.-|.--.+-...|..++..
T Consensus 15 ~de~s~sl~Gav~GFv~ywlA~aiPfl~YG~nTlfF~LYTWPFFLALmPvsVlvGi~l~~Ll~g~l~~s~l~t~l~V~~l 94 (105)
T PRK10726 15 DEETTWSLPGAVVGFVSWLLALAIPFLIYGSNTLFFFLYTWPFFLALMPVSVLVGIALHSLLRGKLLYSILFTLLTVGCL 94 (105)
T ss_pred ccCcccccchHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 345788999887755554444433222221110 00113333332333444445666666666666666666666655
Q ss_pred HHHHHH
Q 027361 163 IGAGWF 168 (224)
Q Consensus 163 ~~~~~~ 168 (224)
...+..
T Consensus 95 FwllF~ 100 (105)
T PRK10726 95 FWLLFS 100 (105)
T ss_pred HHHHHH
Confidence 444433
No 52
>COG4129 Predicted membrane protein [Function unknown]
Probab=31.06 E-value=76 Score=27.82 Aligned_cols=15 Identities=27% Similarity=0.188 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHH
Q 027361 153 VFSGAILGILIGAGW 167 (224)
Q Consensus 153 Vl~G~~lG~~~~~~~ 167 (224)
+.-|..+.+++....
T Consensus 83 ~~~~v~~~i~i~~~~ 97 (332)
T COG4129 83 IAFGVVLLIIIPLLV 97 (332)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444444444444433
No 53
>TIGR01475 ubiA_other putative 4-hydroxybenzoate polyprenyltransferase. A fairly deep split separates this polyprenyltransferase subfamily from the set of mitochondrial and proteobacterial 4-hydroxybenzoate polyprenyltransferases, described in TIGR01474. Protoheme IX farnesyltransferase (heme O synthase) (TIGR01473) is more distantly related. Because no species appears to have both this protein and a member of TIGR01474, it is likely that This model represents 4-hydroxybenzoate polyprenyltransferase, a critical enzyme of ubiquinone biosynthesis, in the Archaea, Gram-positive bacteria, Aquifex aeolicus, the Chlamydias, etc.
Probab=30.95 E-value=3.2e+02 Score=22.93 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=18.9
Q ss_pred HHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 027361 137 LTMYSRVYLGYHTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 137 lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
...++- ........+++.|...|......+...
T Consensus 118 ~~~Y~~-~Kr~~~~~~~~~g~~~~~~~~~g~~a~ 150 (282)
T TIGR01475 118 LIIYPY-TKRFTFLCHYVLGSTYGLAPLAGWVAV 150 (282)
T ss_pred HHHHhh-HhccccccHHHHHHHHHHHHHHHHHHH
Confidence 445553 233445688888888776544444433
No 54
>KOG3750 consensus Inositol phospholipid synthesis protein, Scs3p [Lipid transport and metabolism]
Probab=30.84 E-value=1.4e+02 Score=25.30 Aligned_cols=25 Identities=28% Similarity=0.347 Sum_probs=17.2
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHH
Q 027361 145 LGYHTVAQVFSGAILGILIGAGWFW 169 (224)
Q Consensus 145 lg~H~~sDVl~G~~lG~~~~~~~~~ 169 (224)
..+|...+=+.|.+.|++.=+..|.
T Consensus 219 iYyH~~~ekVig~l~g~l~W~~tY~ 243 (270)
T KOG3750|consen 219 IYYHTLLEKVIGALTGLLTWYFTYR 243 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhee
Confidence 4578888888888887665444443
No 55
>PRK06080 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated
Probab=30.56 E-value=3.3e+02 Score=22.94 Aligned_cols=36 Identities=25% Similarity=0.616 Sum_probs=24.3
Q ss_pred HHHHHHHh--hhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 027361 135 AVLTMYSR--VYLGYHTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 135 ~~lv~~sR--v~lg~H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
.....+|. ..++++-+.++..|...|.......+..
T Consensus 124 ~~~~~Ys~~p~~~~~~glge~~~~~~~G~~~~~~~~~~ 161 (293)
T PRK06080 124 AAAILYTGGPKPYGYTGLGELFVGVFFGLVIVLGTYYL 161 (293)
T ss_pred HHhhhhcCCCCccCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 34455664 3455677899999999988776655443
No 56
>COG5415 Predicted integral membrane metal-binding protein [General function prediction only]
Probab=28.08 E-value=2.1e+02 Score=23.47 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhhcCCCChHH--HHHHHHHHHHHHHHH
Q 027361 131 HWTLAVLTMYSRVYLGYHTVAQ--VFSGAILGILIGAGW 167 (224)
Q Consensus 131 ~~~~~~lv~~sRv~lg~H~~sD--Vl~G~~lG~~~~~~~ 167 (224)
..+....+|+|-+|..+|-..| +++-.++|.+..+++
T Consensus 48 ~slAl~~l~~S~iy~~~~~y~~~~~It~~llgs~slymf 86 (251)
T COG5415 48 YSLALTVLALSYIYWEYHGYRPYLVITALLLGSGSLYMF 86 (251)
T ss_pred HHHHHHHHHHHHHHhhccccchhHHHHHHHHhhhHHHHH
Confidence 3444455677999998887665 888888885444433
No 57
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=26.96 E-value=23 Score=27.90 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=17.8
Q ss_pred CCCCchhHHHHHHHHHHHHhhhhhccCC
Q 027361 197 SHIPDPLKFEYDNARAARSSANKVSKSN 224 (224)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (224)
-.|.=.+-+||+..|++..+..|-.+||
T Consensus 146 lFIGYSIsfE~~e~~~~~~~~~~~~~~~ 173 (173)
T PF11085_consen 146 LFIGYSISFEYNEENHREEKEERTNYSN 173 (173)
T ss_pred HHhceeehhhhhhhhhccccccccccCC
Confidence 3455667788888775544444447776
No 58
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=26.93 E-value=21 Score=30.60 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhcCCCChH
Q 027361 130 LHWTLAVLTMYSRVYLGYHTVA 151 (224)
Q Consensus 130 ~~~~~~~lv~~sRv~lg~H~~s 151 (224)
+++.++++.-+--|++...|++
T Consensus 144 LAF~LaivlLIIAv~L~qaWfT 165 (381)
T PF05297_consen 144 LAFLLAIVLLIIAVLLHQAWFT 165 (381)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444445566665554
No 59
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=26.17 E-value=3.8e+02 Score=22.75 Aligned_cols=6 Identities=17% Similarity=0.395 Sum_probs=2.7
Q ss_pred CCCchh
Q 027361 93 WPSSHS 98 (224)
Q Consensus 93 fPSgHa 98 (224)
.|+.|.
T Consensus 8 ~~~er~ 13 (301)
T PF14362_consen 8 SPAERN 13 (301)
T ss_pred ChHHHH
Confidence 344444
No 60
>PF12084 DUF3561: Protein of unknown function (DUF3561); InterPro: IPR022721 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=25.12 E-value=2.7e+02 Score=20.12 Aligned_cols=82 Identities=11% Similarity=0.146 Sum_probs=40.7
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHHHHHhccc---cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHH
Q 027361 86 ETCDSHGWPSSHSQYMFFFAVYFTLLTCKGIGL---WGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGIL 162 (224)
Q Consensus 86 ~~~~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~ 162 (224)
.++..+|+|-|-+-+.+...++..-++....+. .--.++.......+...+-++++.+.-|.-..+-...+..+|..
T Consensus 18 ~de~t~sl~G~v~GF~~~wLAlaiPfl~YG~nTLfFfLYTWPFFLALmPvsVl~Gi~l~~ll~g~l~~s~~~t~l~V~~l 97 (107)
T PF12084_consen 18 DDEPTWSLPGGVVGFVFWWLALAIPFLVYGSNTLFFFLYTWPFFLALMPVSVLIGIALSSLLRGKLLWSLLATGLAVGCL 97 (107)
T ss_pred cCCCcccccchhHHHHHHHHHHhhHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEeeehhhHHHHHHHH
Confidence 345788999887755444443332222211110 00113333333344444555666666666666656666666655
Q ss_pred HHHHH
Q 027361 163 IGAGW 167 (224)
Q Consensus 163 ~~~~~ 167 (224)
...+.
T Consensus 98 FwllF 102 (107)
T PF12084_consen 98 FWLLF 102 (107)
T ss_pred HHHHH
Confidence 44443
No 61
>PF10389 CoatB: Bacteriophage coat protein B ; InterPro: IPR008020 The major coat protein in the capsid of filamentous bacteriophage forms a helical assembly of about 7000 identical protomers, with each protomer comprised of 46 amino acids, after the cleavage of the signal peptide. Each protomer forms a slightly curved helix that combines to form a tubular structure that encapsulates the viral DNA [].; PDB: 2IFO_A.
Probab=25.03 E-value=1.4e+02 Score=18.12 Aligned_cols=21 Identities=24% Similarity=0.718 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 027361 153 VFSGAILGILIGAGWFWFVNS 173 (224)
Q Consensus 153 Vl~G~~lG~~~~~~~~~~~~~ 173 (224)
.++|..+++.++...|...++
T Consensus 24 ~ig~avL~v~V~i~v~kwiRr 44 (46)
T PF10389_consen 24 TIGGAVLGVIVGIAVYKWIRR 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 578888888888888876654
No 62
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.39 E-value=85 Score=22.88 Aligned_cols=18 Identities=28% Similarity=0.285 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 027361 151 AQVFSGAILGILIGAGWF 168 (224)
Q Consensus 151 sDVl~G~~lG~~~~~~~~ 168 (224)
+|.++|.++|+.++++.=
T Consensus 50 sefIsGilVGa~iG~llD 67 (116)
T COG5336 50 SEFISGILVGAGIGWLLD 67 (116)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 566666666666665543
No 63
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=23.74 E-value=99 Score=20.74 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=22.0
Q ss_pred EeecCCCchHHHHHHH-HHHHHHHHHHHHHHHHH
Q 027361 14 VRYRKGDQLGHFLAWV-SLVPVFISLGGFVSHFI 46 (224)
Q Consensus 14 ~~~~~~d~~~~~~~~~-~~~p~~i~i~~~~~~~~ 46 (224)
++|...|+.+++..++ .+.|++++- +++.|.+
T Consensus 12 v~~vAkdP~~Fl~~vll~LtPlfiis-a~lSwkL 44 (74)
T PF15086_consen 12 VEWVAKDPYEFLTTVLLILTPLFIIS-AVLSWKL 44 (74)
T ss_pred HHHHHcChHHHHHHHHHHHhHHHHHH-HHHHHHH
Confidence 5666778887776554 466888887 6666655
No 64
>PRK11677 hypothetical protein; Provisional
Probab=23.65 E-value=88 Score=23.64 Aligned_cols=18 Identities=39% Similarity=0.687 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 027361 153 VFSGAILGILIGAGWFWF 170 (224)
Q Consensus 153 Vl~G~~lG~~~~~~~~~~ 170 (224)
.++|+++|+++|++...+
T Consensus 6 a~i~livG~iiG~~~~R~ 23 (134)
T PRK11677 6 ALIGLVVGIIIGAVAMRF 23 (134)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 467777887777776665
No 65
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=23.47 E-value=3.4e+02 Score=20.95 Aligned_cols=87 Identities=18% Similarity=0.288 Sum_probs=51.9
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHH
Q 027361 89 DSHGWPSSHSQYMFFFAVYFTLLTCKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVAQVFSGAILGILIGAGWF 168 (224)
Q Consensus 89 ~~~sfPSgHa~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~sDVl~G~~lG~~~~~~~~ 168 (224)
....||=.|..+..+..... +| -....+++++.-|..+|.=++- .+=|..+|.+++-+.|
T Consensus 24 ~~k~~P~QH~iNviaaVlLG---------------P~----ya~~~Af~~sliR~~lg~Gt~l-AfPGsm~GA~laGlly 83 (150)
T PF09512_consen 24 PAKCFPMQHMINVIAAVLLG---------------PW----YAVAMAFITSLIRNLLGTGTLL-AFPGSMFGALLAGLLY 83 (150)
T ss_pred ccccChHHHHHHHHHHHHhc---------------hH----HHHHHHHHHHHHHHHhCCCCHH-HhccchHHHHHHHHHH
Confidence 45689999997654432211 22 2356677888889988887654 4456677777777677
Q ss_pred HHHHhhh---------ccchhHHhhcccccceeeec
Q 027361 169 WFVNSVL---------FPYFPAIEESAFGRYFYVKD 195 (224)
Q Consensus 169 ~~~~~~~---------~~~~~~~~~~~~~~~~~~rd 195 (224)
...++.. +....-+...|+.+++.-++
T Consensus 84 r~~~k~~~a~lGEviGTGiIGal~sypva~~~~g~~ 119 (150)
T PF09512_consen 84 RKTKKLWAAALGEVIGTGIIGALLSYPVAKLFMGKE 119 (150)
T ss_pred HHhCcchHHHHHHHHhhHHHHHHHHHHHHHHHhCCc
Confidence 6665531 12233345555555555443
No 66
>PF13571 DUF4133: Domain of unknown function (DUF4133)
Probab=22.78 E-value=1.7e+02 Score=20.77 Aligned_cols=72 Identities=13% Similarity=0.180 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhc-CCCChHHHHHHHHHHHHHHHHHHHHHHhh-hccchhHHhhcccccceeee
Q 027361 123 NRWFSNVLHWTLAVLTMYSRVYL-GYHTVAQVFSGAILGILIGAGWFWFVNSV-LFPYFPAIEESAFGRYFYVK 194 (224)
Q Consensus 123 ~~~~~~~~~~~~~~lv~~sRv~l-g~H~~sDVl~G~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r 194 (224)
.+.+.++++.+++.++.+.=+|. |.-.+-=+..|...|....+..+.+-++. .-++.........+++...|
T Consensus 16 aQYl~~faGgll~~~il~~iLYi~Gv~~~ici~~~~~~~~~lv~~~f~ln~kyGe~GlmK~~a~r~~P~yi~~r 89 (96)
T PF13571_consen 16 AQYLFYFAGGLLGLFILFVILYIAGVNQWICIGFGVVSGSLLVWQTFRLNRKYGEHGLMKLLAKRRHPRYIINR 89 (96)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhhhheeeeeccccccHHHHHHHHHhhCCCcEEEec
Confidence 34444445555555555555555 54444333334444443333334333333 33334444455555555444
No 67
>PF06127 DUF962: Protein of unknown function (DUF962); InterPro: IPR009305 This family consists of several eukaryotic and prokaryotic proteins of unknown function. The yeast protein P25338 from SWISSPROT has been found to be non-essential for cell growth.
Probab=22.25 E-value=2.7e+02 Score=19.36 Aligned_cols=59 Identities=8% Similarity=0.062 Sum_probs=27.5
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 027361 17 RKGDQLGHFLAWVSLVPVFISLGGFVSHFIFRREIQGMFFALGLLVSQFINEFIKTTVQQARPEM 81 (224)
Q Consensus 17 ~~~d~~~~~~~~~~~~p~~i~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~ 81 (224)
.+.+..+.....++...++... ... ..... ....+.+.+++..+..+--..+.+.||..
T Consensus 14 ~H~~~~n~~lH~igvp~~~~~~-~~~--~~~~~---~~~~l~~~~~g~~~q~~GH~~~E~~~Pa~ 72 (95)
T PF06127_consen 14 YHRNPINRALHFIGVPLIIFSL-LLL--LARIP---WWLALAVFVVGWGLQFIGHFFFEKNKPAF 72 (95)
T ss_pred HcCCHhhHHHHHHHHHHHHHHH-HHH--HHHcc---HHHHHHHHHHHHHHHHHhHHHHHcCCCcc
Confidence 3466667666666654444433 212 11111 12222334444444444333488889943
No 68
>COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms]
Probab=21.84 E-value=3.9e+02 Score=20.86 Aligned_cols=86 Identities=8% Similarity=0.058 Sum_probs=44.1
Q ss_pred cCCCCCcCccccCCCCCCCCchhHHHHHHHHHHHHHH-HHhccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChH---
Q 027361 76 QARPEMCVLLETCDSHGWPSSHSQYMFFFAVYFTLLT-CKGIGLWGIKNRWFSNVLHWTLAVLTMYSRVYLGYHTVA--- 151 (224)
Q Consensus 76 rpRP~~~~~~~~~~~~sfPSgHa~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~lv~~sRv~lg~H~~s--- 151 (224)
-.||+..+ .+.-||--=+. ...+.-...+. ..+.+.... .+.......+-.++-.++|=+..|.|.+.
T Consensus 37 L~kP~w~p-----p~~~f~~vWtv--Ly~l~~iSa~lvW~~~~~~~~-~~~~~~ly~~ql~ln~awspiff~l~~l~~a~ 108 (161)
T COG3476 37 LKKPFWLP-----PEWAFPPVWTV--LYALIGISAYLVWEKGPGQGT-SWLLMFLYLLQLILNFAWSPIFFGLRSLGAAL 108 (161)
T ss_pred ccCCCCCC-----hHHHhhHHHHH--HHHHHHHHHHHHHHHcCCCch-hHHHHHHHHHHHHHHHHHHHHHHhhcCcchHH
Confidence 56776654 55667655553 22222222222 222222221 33333334556677788999999999876
Q ss_pred -HHHHHHHHHHHHHHHHHH
Q 027361 152 -QVFSGAILGILIGAGWFW 169 (224)
Q Consensus 152 -DVl~G~~lG~~~~~~~~~ 169 (224)
|++.|++...++...++.
T Consensus 109 i~~lll~~~vl~l~i~~~~ 127 (161)
T COG3476 109 IIILLLWIAVLVLTIIVWP 127 (161)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 444454444444444443
No 69
>PF06799 DUF1230: Protein of unknown function (DUF1230); InterPro: IPR009631 This family represents Ycf36, which is found in plants, encoded in the genomes of algal chloroplasts and in cyanobacteria. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=21.66 E-value=1.8e+02 Score=22.33 Aligned_cols=12 Identities=17% Similarity=0.329 Sum_probs=7.2
Q ss_pred cCCCCCCCCchh
Q 027361 87 TCDSHGWPSSHS 98 (224)
Q Consensus 87 ~~~~~sfPSgHa 98 (224)
..--+|.|+...
T Consensus 18 ~S~~FsW~~~~~ 29 (144)
T PF06799_consen 18 ESWFFSWPTLEL 29 (144)
T ss_pred hCcCccCccCCh
Confidence 345577776654
No 70
>PF15179 Myc_target_1: Myc target protein 1
Probab=21.42 E-value=1.2e+02 Score=24.21 Aligned_cols=8 Identities=13% Similarity=0.455 Sum_probs=3.3
Q ss_pred hhcccccc
Q 027361 183 EESAFGRY 190 (224)
Q Consensus 183 ~~~~~~~~ 190 (224)
...+|.++
T Consensus 51 ASa~Isr~ 58 (197)
T PF15179_consen 51 ASARISRW 58 (197)
T ss_pred cccccccc
Confidence 34444443
No 71
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only]
Probab=20.07 E-value=59 Score=26.37 Aligned_cols=23 Identities=30% Similarity=0.619 Sum_probs=18.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHH
Q 027361 148 HTVAQVFSGAILGILIGAGWFWF 170 (224)
Q Consensus 148 H~~sDVl~G~~lG~~~~~~~~~~ 170 (224)
|-..|-++|.++|..++.+++-+
T Consensus 210 hLv~DFiAG~LLGA~l~~~FFPi 232 (297)
T KOG1519|consen 210 HLVNDFIAGGLLGAMLGFLFFPI 232 (297)
T ss_pred HHHHHHhhhhHHHHHHHHhhccH
Confidence 44579999999999999887754
Done!