AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on

Query Sequence

>027362
MESSASGRALPHHREPFDWLTRPPLNLITTTAKHSLSVSLSRRLLHHHPLHARRLLHSSV
KKLSRLCHIPRLKDQWCENAFRFNGVNFFRFTNDAFASSLSFFNGGGTRKNSGHEGTSHL
DTARTNLFIGRQWTNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFL
HANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASNNS

High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with RBL10 RBL10 RBL10 RHOMBOID-like protein 10	protein from Arabidopsis thaliana	1.7e-41
BLAST match view associations BLAST with SO_1000 SO_1000 SO_1000 Rhomboid protease	protein from Shewanella oneidensis MR-1	2.5e-09
BLAST match view associations BLAST with SO_1000 SO_1000 SO_1000 rhomboid family protein	protein from Shewanella oneidensis MR-1	2.5e-09
BLAST match view associations BLAST with aarA aarA aarA Rhomboid protease AarA	protein from Providencia stuartii	2.1e-06
BLAST match view associations BLAST with AT5G38510 AT5G38510 AT5G38510	protein from Arabidopsis thaliana	5.0e-06
BLAST match view associations BLAST with CJE1083 CJE1083 CJE1083 Rhomboid family protein	protein from Campylobacter jejuni RM1221	3.8e-05
BLAST match view associations BLAST with CJE_1083 CJE_1083 CJE_1083 rhomboid family protein	protein from Campylobacter jejuni RM1221	3.8e-05
BLAST match view associations BLAST with PF11_0149 PF11_0149 PF11_0149 hypothetical protein	gene from Plasmodium falciparum	5.4e-05
BLAST match view associations BLAST with ROM1 ROM1 ROM1 Rhomboid protease ROM1, putative	protein from Plasmodium falciparum 3D7	5.4e-05
BLAST match view associations BLAST with BAS0235 BAS0235 BAS0235 Rhomboid family protein	protein from Bacillus anthracis	0.00013
BLAST match view associations BLAST with BA_0249 BA_0249 BA_0249 rhomboid family protein	protein from Bacillus anthracis str. Ames	0.00013
BLAST match view associations BLAST with DDB_G0295849 DDB_G0295849 DDB_G0295849 rhomboid family protein	gene from Dictyostelium discoideum	0.00035
BLAST match view associations BLAST with GSU1188 GSU1188 GSU1188 Rhomboid-related membrane protein	protein from Geobacter sulfurreducens PCA	0.00040
BLAST match view associations BLAST with GSU_1188 GSU_1188 GSU_1188 rhomboid family protein	protein from Geobacter sulfurreducens PCA	0.00040
BLAST match view associations BLAST with DDB_G0271574 DDB_G0271574 DDB_G0271574	gene from Dictyostelium discoideum	0.00068

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027362
        (224 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2032940 - symbol:RBL10 "RHOMBOID-like protein ...   440  1.7e-41   1
UNIPROTKB|Q8EI50 - symbol:SO_1000 "Rhomboid protease" spe...   146  2.5e-09   1
TIGR_CMR|SO_1000 - symbol:SO_1000 "rhomboid family protei...   146  2.5e-09   1
UNIPROTKB|P46116 - symbol:aarA "Rhomboid protease AarA" s...   127  2.1e-06   1
TAIR|locus:2159808 - symbol:AT5G38510 species:3702 "Arabi...   127  5.0e-06   1
UNIPROTKB|Q5HUF9 - symbol:CJE1083 "Rhomboid family protei...   111  3.8e-05   1
TIGR_CMR|CJE_1083 - symbol:CJE_1083 "rhomboid family prot...   111  3.8e-05   1
GENEDB_PFALCIPARUM|PF11_0149 - symbol:PF11_0149 "hypothet...   116  5.4e-05   1
UNIPROTKB|Q8IIM2 - symbol:ROM1 "Rhomboid protease ROM1, p...   116  5.4e-05   1
UNIPROTKB|Q81VF8 - symbol:BAS0235 "Rhomboid family protei...   109  0.00013   1
TIGR_CMR|BA_0249 - symbol:BA_0249 "rhomboid family protei...   109  0.00013   1
DICTYBASE|DDB_G0295849 - symbol:DDB_G0295849 "rhomboid fa...   113  0.00035   1
UNIPROTKB|Q74DX7 - symbol:GSU1188 "Rhomboid-related membr...    98  0.00040   2
TIGR_CMR|GSU_1188 - symbol:GSU_1188 "rhomboid family prot...    98  0.00040   2
TAIR|locus:2029376 - symbol:KOM "KOMPEITO" species:3702 "...   110  0.00047   1
DICTYBASE|DDB_G0271574 - symbol:DDB_G0271574 species:4468...   105  0.00068   1


>TAIR|locus:2032940 [details] [associations]
            symbol:RBL10 "RHOMBOID-like protein 10" species:3702
            "Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
            activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0031969 "chloroplast
            membrane" evidence=IDA] InterPro:IPR002610 InterPro:IPR022764
            Pfam:PF01694 GO:GO:0016021 EMBL:CP002684 GO:GO:0006508
            GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0031969 IPI:IPI00535626
            RefSeq:NP_173900.2 UniGene:At.16920 ProteinModelPortal:F4ICF4
            SMR:F4ICF4 EnsemblPlants:AT1G25290.1 GeneID:839113
            KEGG:ath:AT1G25290 OMA:HANIGHL Uniprot:F4ICF4
        Length = 343

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 88/167 (52%), Positives = 115/167 (68%)

Query:    60 VKKLSRLCHIPRLKDQWCENAFRFNGVNFFRFTNDAFASSLS----FFNGGGTRKN--SG 113
             +KKL       R+K    +  F FNG NF +   D   S  S    FFNGG +R N   G
Sbjct:    50 LKKLQHFSDDARMKFARYQRVFVFNGANFLKSRVDIRLSQSSPFVCFFNGGESRLNPRGG 109

Query:   114 HEGTSHLDTARTNLFIGRQWTNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWR 173
              EG+S+ +T++ N   GR+WTN+LLA+NV++YIAQ A+  K+L WGAKINSLI++GQ WR
Sbjct:   110 EEGSSNPETSKRNTVNGRRWTNVLLAINVIMYIAQIASDGKVLTWGAKINSLIERGQLWR 169

Query:   174 LATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIA 220
             LAT++ LHAN  HLM+NCYSLNSIGPT E + GP+R+L VY +SA+A
Sbjct:   170 LATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVA 216


>UNIPROTKB|Q8EI50 [details] [associations]
            symbol:SO_1000 "Rhomboid protease" species:211586
            "Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
            GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE014299
            GenomeReviews:AE014299_GR RefSeq:NP_716628.1
            ProteinModelPortal:Q8EI50 GeneID:1168841 KEGG:son:SO_1000
            PATRIC:23521647 HOGENOM:HOG000296107 OMA:FEARNGH
            ProtClustDB:CLSK906046 Uniprot:Q8EI50
        Length = 528

 Score = 146 (56.5 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 37/102 (36%), Positives = 55/102 (53%)

Query:   129 IGRQWTNILLAVNVLVYIAQ-FATQ------DKLLL-WGAKINSLIDKGQFWRLATSAFL 180
             +G   T ILL   VL+++   FA+       + +LL WGA +  L+   Q WRL ++ FL
Sbjct:   332 VGFVITPILLLSKVLIFMLMVFASHHFITLPNSVLLDWGANLRQLVLDQQVWRLISNVFL 391

Query:   181 HANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASN 222
             H  + HL+ N Y L   G  +E + G  R LGVY  S +A++
Sbjct:   392 HGGLMHLIFNLYGLFFAGIFLEPLLGKWRLLGVYLMSGLAAS 433


>TIGR_CMR|SO_1000 [details] [associations]
            symbol:SO_1000 "rhomboid family protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
            GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE014299
            GenomeReviews:AE014299_GR RefSeq:NP_716628.1
            ProteinModelPortal:Q8EI50 GeneID:1168841 KEGG:son:SO_1000
            PATRIC:23521647 HOGENOM:HOG000296107 OMA:FEARNGH
            ProtClustDB:CLSK906046 Uniprot:Q8EI50
        Length = 528

 Score = 146 (56.5 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 37/102 (36%), Positives = 55/102 (53%)

Query:   129 IGRQWTNILLAVNVLVYIAQ-FATQ------DKLLL-WGAKINSLIDKGQFWRLATSAFL 180
             +G   T ILL   VL+++   FA+       + +LL WGA +  L+   Q WRL ++ FL
Sbjct:   332 VGFVITPILLLSKVLIFMLMVFASHHFITLPNSVLLDWGANLRQLVLDQQVWRLISNVFL 391

Query:   181 HANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIASN 222
             H  + HL+ N Y L   G  +E + G  R LGVY  S +A++
Sbjct:   392 HGGLMHLIFNLYGLFFAGIFLEPLLGKWRLLGVYLMSGLAAS 433


>UNIPROTKB|P46116 [details] [associations]
            symbol:aarA "Rhomboid protease AarA" species:588
            "Providencia stuartii" [GO:0008236 "serine-type peptidase activity"
            evidence=IMP] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
            GO:GO:0016021 GO:GO:0005886 GO:GO:0006508 EMBL:L28755 PIR:A55862
            ProteinModelPortal:P46116 MEROPS:S54.004 BRENDA:3.4.21.105
            GO:GO:0004252 GO:GO:0008236 PANTHER:PTHR22936 Uniprot:P46116
        Length = 281

 Score = 127 (49.8 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 34/95 (35%), Positives = 48/95 (50%)

Query:   134 TNILLAVNVLVYIAQ--FAT-----QDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAH 186
             T  L+ +N+ VY  Q  FA+     +  L+L+GA I  L   G +WR   S  LH+N  H
Sbjct:    24 TLTLVLLNIAVYFYQIVFASPLDSRESNLILFGANIYQLSLTGDWWRYPISMMLHSNGTH 83

Query:   187 LMVNCYSLNSIGPTMEKICGPRRYLGVYFSSAIAS 221
             L  NC +L  IG   E+  G  + L +Y  S I +
Sbjct:    84 LAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGA 118


>TAIR|locus:2159808 [details] [associations]
            symbol:AT5G38510 species:3702 "Arabidopsis thaliana"
            [GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
            GO:GO:0016021 EMBL:AB005231 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 eggNOG:COG0705
            EMBL:BT012562 EMBL:AK226685 IPI:IPI00531406 RefSeq:NP_001078681.1
            RefSeq:NP_198667.1 UniGene:At.50493 ProteinModelPortal:Q9FFX0
            STRING:Q9FFX0 PaxDb:Q9FFX0 PRIDE:Q9FFX0 EnsemblPlants:AT5G38510.1
            EnsemblPlants:AT5G38510.2 GeneID:833839 KEGG:ath:AT5G38510
            TAIR:At5g38510 HOGENOM:HOG000152445 InParanoid:Q9FFX0 OMA:SHFGPID
            PhylomeDB:Q9FFX0 ProtClustDB:CLSN2687108 Genevestigator:Q9FFX0
            Uniprot:Q9FFX0
        Length = 434

 Score = 127 (49.8 bits), Expect = 5.0e-06, P = 5.0e-06
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query:   156 LLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYF 215
             LL+GAKIN LI  G++WRL T  FLH+ I H+ ++ ++L + GP + +  G   +  +Y 
Sbjct:   216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query:   216 SSAIASN 222
                ++ N
Sbjct:   276 LGGVSGN 282


>UNIPROTKB|Q5HUF9 [details] [associations]
            symbol:CJE1083 "Rhomboid family protein" species:195099
            "Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
            GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000025
            GenomeReviews:CP000025_GR eggNOG:COG0705 HOGENOM:HOG000229238
            PIR:H81375 RefSeq:YP_179076.1 ProteinModelPortal:Q5HUF9
            STRING:Q5HUF9 GeneID:3231592 KEGG:cjr:CJE1083 PATRIC:20043975
            OMA:YWRLVSP ProtClustDB:CLSK879037
            BioCyc:CJEJ195099:GJC0-1109-MONOMER Uniprot:Q5HUF9
        Length = 172

 Score = 111 (44.1 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query:   134 TNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
             T  L+ +N+L Y     + D   + G  +N L   G +W+L +S FLH N+ HL++N   
Sbjct:     3 TIFLIFLNILCYF--LISYDYYNILG--LNILFFNGAYWQLLSSMFLHGNLTHLILNMIV 58

Query:   194 LNSIGPTMEKICGPRRYLGVYF 215
             L   G  +E   G   ++ +YF
Sbjct:    59 LFQFGRMLETYLGALCFIFIYF 80


>TIGR_CMR|CJE_1083 [details] [associations]
            symbol:CJE_1083 "rhomboid family protein" species:195099
            "Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016020 "membrane" evidence=ISS] InterPro:IPR002610
            InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
            GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000025
            GenomeReviews:CP000025_GR eggNOG:COG0705 HOGENOM:HOG000229238
            PIR:H81375 RefSeq:YP_179076.1 ProteinModelPortal:Q5HUF9
            STRING:Q5HUF9 GeneID:3231592 KEGG:cjr:CJE1083 PATRIC:20043975
            OMA:YWRLVSP ProtClustDB:CLSK879037
            BioCyc:CJEJ195099:GJC0-1109-MONOMER Uniprot:Q5HUF9
        Length = 172

 Score = 111 (44.1 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query:   134 TNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
             T  L+ +N+L Y     + D   + G  +N L   G +W+L +S FLH N+ HL++N   
Sbjct:     3 TIFLIFLNILCYF--LISYDYYNILG--LNILFFNGAYWQLLSSMFLHGNLTHLILNMIV 58

Query:   194 LNSIGPTMEKICGPRRYLGVYF 215
             L   G  +E   G   ++ +YF
Sbjct:    59 LFQFGRMLETYLGALCFIFIYF 80


>GENEDB_PFALCIPARUM|PF11_0149 [details] [associations]
            symbol:PF11_0149 "hypothetical protein"
            species:5833 "Plasmodium falciparum" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
            GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
            EMBL:AE014186 GenomeReviews:AE014186_GR RefSeq:XP_001347820.2
            ProteinModelPortal:Q8IIM2 MEROPS:S54.018
            EnsemblProtists:PF11_0149.1 GeneID:810696 KEGG:pfa:PF11_0149
            EuPathDB:PlasmoDB:PF3D7_1114100.1 ProtClustDB:PTZ00101
            Uniprot:Q8IIM2
        Length = 278

 Score = 116 (45.9 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 31/89 (34%), Positives = 48/89 (53%)

Query:   136 ILLAVNVLVYIAQFAT-QDKLLLW-GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
             I+  ++V +  A F T  D LL+  GA + S I +G+  RL    FLHANI H + N + 
Sbjct:    65 IVFIISVSIKPADFLTPSDSLLVTLGANVASRIKQGEIHRLILPIFLHANIFHAIFNIFF 124

Query:   194 LNSIGPTMEKICGPRRYLGVYFSSAIASN 222
                +G T+EK  G  + + +YF + +  N
Sbjct:   125 QLRMGFTLEKNYGIMKIIILYFVTGMYGN 153


>UNIPROTKB|Q8IIM2 [details] [associations]
            symbol:ROM1 "Rhomboid protease ROM1, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
            GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
            EMBL:AE014186 GenomeReviews:AE014186_GR RefSeq:XP_001347820.2
            ProteinModelPortal:Q8IIM2 MEROPS:S54.018
            EnsemblProtists:PF11_0149.1 GeneID:810696 KEGG:pfa:PF11_0149
            EuPathDB:PlasmoDB:PF3D7_1114100.1 ProtClustDB:PTZ00101
            Uniprot:Q8IIM2
        Length = 278

 Score = 116 (45.9 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 31/89 (34%), Positives = 48/89 (53%)

Query:   136 ILLAVNVLVYIAQFAT-QDKLLLW-GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
             I+  ++V +  A F T  D LL+  GA + S I +G+  RL    FLHANI H + N + 
Sbjct:    65 IVFIISVSIKPADFLTPSDSLLVTLGANVASRIKQGEIHRLILPIFLHANIFHAIFNIFF 124

Query:   194 LNSIGPTMEKICGPRRYLGVYFSSAIASN 222
                +G T+EK  G  + + +YF + +  N
Sbjct:   125 QLRMGFTLEKNYGIMKIIILYFVTGMYGN 153


>UNIPROTKB|Q81VF8 [details] [associations]
            symbol:BAS0235 "Rhomboid family protein" species:1392
            "Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002610
            InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
            GO:GO:0004252 PANTHER:PTHR22936 RefSeq:NP_842802.1
            RefSeq:YP_016855.1 RefSeq:YP_026520.1 ProteinModelPortal:Q81VF8
            DNASU:1085915 EnsemblBacteria:EBBACT00000011813
            EnsemblBacteria:EBBACT00000014219 EnsemblBacteria:EBBACT00000019748
            GeneID:1085915 GeneID:2818791 GeneID:2851802 KEGG:ban:BA_0249
            KEGG:bar:GBAA_0249 KEGG:bat:BAS0235 HOGENOM:HOG000082474
            OMA:MSSYLIM ProtClustDB:CLSK915750
            BioCyc:BANT260799:GJAJ-257-MONOMER
            BioCyc:BANT261594:GJ7F-265-MONOMER Uniprot:Q81VF8
        Length = 190

 Score = 109 (43.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 25/86 (29%), Positives = 44/86 (51%)

Query:   138 LAVNVL-VYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNS 196
             +A+++L +        D  L   A  +  I  G++WRL TS F+H ++ H + N   L  
Sbjct:    13 IAISLLLIQFIMIMLGDFFLFPMAAYHEYIANGEWWRLITSLFVHVDLQHFLSNSICLFV 72

Query:   197 IGPTMEKICGPRRYLGVYFSSAIASN 222
             +G ++EK  G   ++ ++F S I  N
Sbjct:    73 LGSSIEKQLGRFSFIIIFFLSGILGN 98


>TIGR_CMR|BA_0249 [details] [associations]
            symbol:BA_0249 "rhomboid family protein" species:198094
            "Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
            GO:GO:0004252 PANTHER:PTHR22936 RefSeq:NP_842802.1
            RefSeq:YP_016855.1 RefSeq:YP_026520.1 ProteinModelPortal:Q81VF8
            DNASU:1085915 EnsemblBacteria:EBBACT00000011813
            EnsemblBacteria:EBBACT00000014219 EnsemblBacteria:EBBACT00000019748
            GeneID:1085915 GeneID:2818791 GeneID:2851802 KEGG:ban:BA_0249
            KEGG:bar:GBAA_0249 KEGG:bat:BAS0235 HOGENOM:HOG000082474
            OMA:MSSYLIM ProtClustDB:CLSK915750
            BioCyc:BANT260799:GJAJ-257-MONOMER
            BioCyc:BANT261594:GJ7F-265-MONOMER Uniprot:Q81VF8
        Length = 190

 Score = 109 (43.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 25/86 (29%), Positives = 44/86 (51%)

Query:   138 LAVNVL-VYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNS 196
             +A+++L +        D  L   A  +  I  G++WRL TS F+H ++ H + N   L  
Sbjct:    13 IAISLLLIQFIMIMLGDFFLFPMAAYHEYIANGEWWRLITSLFVHVDLQHFLSNSICLFV 72

Query:   197 IGPTMEKICGPRRYLGVYFSSAIASN 222
             +G ++EK  G   ++ ++F S I  N
Sbjct:    73 LGSSIEKQLGRFSFIIIFFLSGILGN 98


>DICTYBASE|DDB_G0295849 [details] [associations]
            symbol:DDB_G0295849 "rhomboid family protein"
            species:44689 "Dictyostelium discoideum" [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA;ISS]
            [GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
            [GO:0008236 "serine-type peptidase activity" evidence=ISS]
            InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
            dictyBase:DDB_G0295849 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
            GO:GO:0008236 PANTHER:PTHR22936 EMBL:AAFI02000044 MEROPS:S54.A16
            RefSeq:XP_002649151.1 EnsemblProtists:DDB0266786 GeneID:8623398
            KEGG:ddi:DDB_G0295849 Uniprot:C7G025
        Length = 489

 Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
 Identities = 24/68 (35%), Positives = 36/68 (52%)

Query:   155 LLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVY 214
             LL  GAK + LI  G++WR  T  FLH  I H ++N  +   +G  +E+  G  R + +Y
Sbjct:   277 LLDVGAKYSPLILNGEWWRFFTPIFLHVGIFHYLMNMVTQLRVGMQLERAYGGHRIVPIY 336

Query:   215 FSSAIASN 222
                 +A N
Sbjct:   337 LLCGVAGN 344


>UNIPROTKB|Q74DX7 [details] [associations]
            symbol:GSU1188 "Rhomboid-related membrane protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
            GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
            EMBL:AE017180 GenomeReviews:AE017180_GR RefSeq:NP_952241.2
            GeneID:2686772 KEGG:gsu:GSU1188 PATRIC:22025148
            HOGENOM:HOG000011961 BioCyc:GSUL243231:GH27-1181-MONOMER
            Uniprot:Q74DX7
        Length = 279

 Score = 98 (39.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query:   152 QDKLLLWGAKINSLIDK-GQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRY 210
             ++ LLL GA     ID+ G+FW L ++ +LH  + H+  N  +L  I P + +  G  R 
Sbjct:    88 RNSLLLLGATGVVPIDRFGRFWTLLSANYLHGGLLHIFFNMMALRQIAPLVAREYGTWRM 147

Query:   211 LGVYFSSAIA 220
               +Y    +A
Sbjct:   148 FSIYTLGGVA 157

 Score = 46 (21.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query:   136 ILLAVNVLVYIAQFATQDK 154
             I+LAVNV++Y+A     ++
Sbjct:    55 IILAVNVVMYVASLLVDNR 73


>TIGR_CMR|GSU_1188 [details] [associations]
            symbol:GSU_1188 "rhomboid family protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
            GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE017180
            GenomeReviews:AE017180_GR RefSeq:NP_952241.2 GeneID:2686772
            KEGG:gsu:GSU1188 PATRIC:22025148 HOGENOM:HOG000011961
            BioCyc:GSUL243231:GH27-1181-MONOMER Uniprot:Q74DX7
        Length = 279

 Score = 98 (39.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query:   152 QDKLLLWGAKINSLIDK-GQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRY 210
             ++ LLL GA     ID+ G+FW L ++ +LH  + H+  N  +L  I P + +  G  R 
Sbjct:    88 RNSLLLLGATGVVPIDRFGRFWTLLSANYLHGGLLHIFFNMMALRQIAPLVAREYGTWRM 147

Query:   211 LGVYFSSAIA 220
               +Y    +A
Sbjct:   148 FSIYTLGGVA 157

 Score = 46 (21.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query:   136 ILLAVNVLVYIAQFATQDK 154
             I+LAVNV++Y+A     ++
Sbjct:    55 IILAVNVVMYVASLLVDNR 73


>TAIR|locus:2029376 [details] [associations]
            symbol:KOM "KOMPEITO" species:3702 "Arabidopsis thaliana"
            [GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
            Pfam:PF01694 GO:GO:0016021 EMBL:CP002684 GO:GO:0006508
            GO:GO:0004252 PANTHER:PTHR22936 IPI:IPI00534674 RefSeq:NP_177909.2
            UniGene:At.52552 ProteinModelPortal:F4I8K2
            EnsemblPlants:AT1G77860.1 GeneID:844122 KEGG:ath:AT1G77860
            OMA:KQKLDRP PhylomeDB:F4I8K2 ArrayExpress:F4I8K2 Uniprot:F4I8K2
        Length = 351

 Score = 110 (43.8 bits), Expect = 0.00047, P = 0.00047
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query:   159 GAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYSLNSIGPTMEKICGPRRYLGVYFSSA 218
             G    +L +  + WR+ TS +LH+ + HL +N  SL  +G  ME+  GP R   +YF S 
Sbjct:   110 GLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSG 169

Query:   219 I 219
             I
Sbjct:   170 I 170


>DICTYBASE|DDB_G0271574 [details] [associations]
            symbol:DDB_G0271574 species:44689 "Dictyostelium
            discoideum" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
            InterPro:IPR022764 Pfam:PF01694 dictyBase:DDB_G0271574
            GO:GO:0016021 GO:GO:0004252 EMBL:AAFI02000006 eggNOG:COG0705
            RefSeq:XP_645590.1 ProteinModelPortal:Q55AV6
            EnsemblProtists:DDB0203584 GeneID:8618044 KEGG:ddi:DDB_G0271574
            InParanoid:Q55AV6 OMA:GMYHILI ProtClustDB:CLSZ2729262
            Uniprot:Q55AV6
        Length = 218

 Score = 105 (42.0 bits), Expect = 0.00068, P = 0.00068
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query:   134 TNILLAVNVLVYIAQFATQDKLLLWGAKINSLIDKGQFWRLATSAFLHANIAHLMVNCYS 193
             T+I+L +NVL++   FA              +I  GQ+WR+ +S F H+NI HL++N  S
Sbjct:    20 TSIILIINVLIWFNHFAYDISTEKVSFNYKEIIG-GQYWRVISSTFSHSNIIHLILNSIS 78

Query:   194 L 194
             +
Sbjct:    79 I 79


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      224       198   0.00083  111 3  11 22  0.41    32
                                                     31  0.45    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  16
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  184 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.76u 0.12s 14.88t   Elapsed:  00:00:00
  Total cpu time:  14.76u 0.12s 14.88t   Elapsed:  00:00:00
  Start:  Mon May 20 22:14:05 2013   End:  Mon May 20 22:14:05 2013

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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data