BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027365
         (224 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SX77|UMP6_ARATH Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis
           thaliana GN=At1g47420 PE=1 SV=1
          Length = 257

 Score =  249 bits (637), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 129/228 (56%), Positives = 158/228 (69%), Gaps = 31/228 (13%)

Query: 27  NNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSIPFDCRSSLVMSIGCNRSF 73
            +HH+ +HLS  R+L +++ P AS            I   S+  D +    M +G  R F
Sbjct: 31  GSHHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRF 89

Query: 74  SEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFS 133
           SEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF 
Sbjct: 90  SEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFR 149

Query: 134 AAEAVEEFIGIIMNIKMEFDDEIGLS-----------------VYQRYATYLDAFGPDES 176
           AAEAVEEF GI+ +IKME DD IG+S                  YQRYA YLD+F P+E 
Sbjct: 150 AAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEV 209

Query: 177 YLRKKVETELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA 224
           YL+KKVE ELG+KMI LKMRC+GLGSEWGKVTVLGTSGL+GSYVEQRA
Sbjct: 210 YLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257


>sp|Q8WN96|ITPR2_BOVIN Inositol 1,4,5-trisphosphate receptor type 2 OS=Bos taurus GN=ITPR2
           PE=2 SV=1
          Length = 2701

 Score = 35.4 bits (80), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 19/105 (18%)

Query: 53  KSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASV-IHDA 111
           +S+PFD R+S          F   + HM V RDP+ +       A  W E+P  + IH+ 
Sbjct: 768 ESLPFDLRAS----------FCRLMLHMHVDRDPQ-ESVVPVRYARLWTEIPTKITIHEY 816

Query: 112 KSALSRNNDDKAGQEVLKNVFS-AAEAVEEFIGIIMNIKMEFDDE 155
            S    + +D      +K  F+   E VEE++  ++N    F D+
Sbjct: 817 DSITDSSRND------MKRKFALTMEFVEEYLKEVVNQPFPFGDK 855


>sp|Q8WSR4|ITPR_ASTPE Inositol 1,4,5-trisphosphate receptor OS=Asterina pectinifera
           GN=IP3R PE=1 SV=1
          Length = 2698

 Score = 35.0 bits (79), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)

Query: 53  KSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASV-IHDA 111
           +S+P+D R+S          F+  + HM V RDP+ ++      A  W E+P  + I D 
Sbjct: 756 ESLPYDLRAS----------FTRLMLHMHVDRDPK-EQVTPVKYAELWSEIPTQITIDDY 804

Query: 112 KSALSRNNDDKAGQEVLKNVFS-AAEAVEEFI-GIIMNIKMEFDDEIGLSVYQ--RYATY 167
             A   NN   AG+E  +  FS   + VEE++  ++  + + +D E     ++    A +
Sbjct: 805 DGA---NNLTHAGKEDAQPKFSLTIKFVEEYLCNVVSGVLVVYDKEQNKLTFEVVNLAKH 861

Query: 168 LDAFG 172
           L  FG
Sbjct: 862 LIYFG 866


>sp|Q0V8C2|EXOC3_BOVIN Exocyst complex component 3 OS=Bos taurus GN=EXOC3 PE=2 SV=1
          Length = 745

 Score = 31.6 bits (70), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 87  EIQRAFKDLMAADWGELPASV--IHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGI 144
           +IQ++  D+ + DW +   ++  + D K A+ R++   A  E LKN+FS  E V E   +
Sbjct: 74  DIQQSLADV-SKDWRQSINTIESLKDVKDAVVRHSQLAAAVENLKNIFSVPEIVRETQDL 132

Query: 145 I 145
           I
Sbjct: 133 I 133


>sp|Q3SFK3|Y2653_THIDA UPF0753 protein Tbd_2653 OS=Thiobacillus denitrificans (strain ATCC
           25259) GN=Tbd_2653 PE=3 SV=1
          Length = 1043

 Score = 31.2 bits (69), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 114 ALSRNNDDKAGQEVLKNVFSAAEA-------VEEFIGIIMNIKMEFDDEIGLSVYQRYAT 166
           A++RN DD+A    L+ VF   +A         E IG++  + M F   +    Y R+  
Sbjct: 519 AITRNADDEAFVSTLEQVFHELKASVLSPFITVEAIGLLFGLDM-FGKSLAPLAYSRWRE 577

Query: 167 YLDAFGPDESYLRKKVETELGSKMI 191
            L    PD   L  K+  E    +I
Sbjct: 578 RLHPDKPDTRLLLDKLSREQAESII 602


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.131    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,655,681
Number of Sequences: 539616
Number of extensions: 2863709
Number of successful extensions: 7952
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7949
Number of HSP's gapped (non-prelim): 14
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)