Query 027365
Match_columns 224
No_of_seqs 16 out of 18
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 14:35:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027365.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027365hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rbli_ d.73.1.1 (I:) Ribulose 64.4 2.2 0.00016 31.3 3.0 51 69-120 7-83 (109)
2 d1rrqa1 a.96.1.2 (A:9-229) Cat 58.6 3.8 0.00027 31.2 3.5 73 84-159 42-116 (221)
3 d1keaa_ a.96.1.2 (A:) Thymine- 55.8 3.9 0.00029 31.3 3.2 75 82-159 45-122 (217)
4 d2abka_ a.96.1.1 (A:) Endonucl 50.5 5.4 0.00039 30.3 3.2 94 55-159 22-118 (211)
5 d1bxni_ d.73.1.1 (I:) Ribulose 48.0 9.9 0.00072 28.3 4.3 45 76-120 7-77 (129)
6 d1w07a2 a.29.3.2 (A:462-659) A 47.6 35 0.0025 25.3 7.5 9 148-156 124-132 (198)
7 d2fnaa1 a.4.5.11 (A:284-356) H 43.3 5.7 0.00042 27.3 2.1 30 82-111 35-71 (73)
8 d1orna_ a.96.1.1 (A:) Endonucl 42.5 6.5 0.00047 29.8 2.5 75 82-159 42-119 (214)
9 d1gvda_ a.4.1.3 (A:) c-Myb, DN 40.6 8.5 0.00062 23.7 2.4 35 135-169 15-50 (52)
10 d1svdm1 d.73.1.1 (M:3-110) Rib 39.7 9.2 0.00067 27.8 2.8 30 71-101 9-38 (108)
11 d1wdds_ d.73.1.1 (S:) Ribulose 34.9 12 0.00085 27.8 2.8 30 71-101 10-39 (122)
12 d1r2fa_ a.25.1.2 (A:) Ribonucl 34.9 86 0.0063 23.9 8.2 55 82-139 8-62 (283)
13 d1wa5b_ a.118.1.1 (B:) Karyoph 31.3 35 0.0025 26.0 5.2 51 123-175 436-502 (503)
14 d2ddha2 a.29.3.2 (A:475-655) P 30.2 92 0.0067 22.5 7.9 33 146-179 112-144 (181)
15 d1o6ba_ c.26.1.3 (A:) Phosphop 29.0 27 0.002 22.9 3.7 40 79-120 122-162 (163)
16 d1m7ka_ a.7.7.1 (A:) Silencer 28.4 45 0.0033 22.5 4.8 30 126-155 10-51 (81)
17 d1guua_ a.4.1.3 (A:) c-Myb, DN 27.8 24 0.0018 21.1 3.0 35 135-169 13-48 (50)
18 d2cdqa1 c.73.1.3 (A:25-328) As 26.2 54 0.004 25.6 5.6 90 104-204 46-144 (304)
19 d1k9xa_ d.92.1.5 (A:) Thermost 25.7 46 0.0034 28.4 5.5 45 129-174 114-164 (497)
20 d1uk5a_ a.7.7.1 (A:) BAG-famil 24.9 37 0.0027 24.2 4.0 12 144-155 64-75 (111)
21 d1kg2a_ a.96.1.2 (A:) Catalyti 24.5 19 0.0014 27.2 2.4 73 83-159 43-118 (224)
22 d1zoda1 c.67.1.4 (A:3-433) Dia 24.2 97 0.0071 24.3 6.9 60 76-139 54-124 (431)
23 d2j9ua1 a.24.28.1 (A:148-241) 24.2 21 0.0015 25.4 2.4 54 133-186 5-59 (94)
24 d1syya_ a.25.1.2 (A:) Ribonucl 23.7 1.5E+02 0.011 22.7 11.8 109 67-176 14-138 (317)
25 d1ky8a_ c.82.1.1 (A:) Non-phos 22.6 24 0.0017 29.0 2.8 50 76-125 42-98 (499)
26 d1bwvs_ d.73.1.1 (S:) Ribulose 22.0 31 0.0022 26.0 3.2 26 76-101 7-32 (138)
27 d1gk8i_ d.73.1.1 (I:) Ribulose 21.2 29 0.0021 26.0 2.8 27 75-101 13-39 (126)
28 d1ig6a_ a.4.3.1 (A:) MRF-2 DNA 20.2 40 0.0029 22.9 3.2 75 88-180 7-94 (107)
29 d1jk0a_ a.25.1.2 (A:) Ribonucl 20.2 77 0.0056 25.1 5.5 55 80-136 63-117 (334)
No 1
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=64.43 E-value=2.2 Score=31.28 Aligned_cols=51 Identities=22% Similarity=0.450 Sum_probs=38.9
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHccc-----------------C--CCc-------hhHHHHHHhhhcccCC
Q 027365 69 CNRSFSEDVAHMPVIRDPEIQRAFKDLMAADW-----------------G--ELP-------ASVIHDAKSALSRNND 120 (224)
Q Consensus 69 ~~R~fS~d~~hlP~i~Dp~i~~afKdLmA~sW-----------------~--elp-------~svv~~ak~alSk~td 120 (224)
..|.| |+.+-||+++|.+|.+-...|++-.| . .|| +.|+.+.+.|++...+
T Consensus 7 ~~~~~-eTfSyLP~Ltd~~I~~QV~yll~qGw~i~iE~ad~~~~~~~yW~mwklPmf~~~d~~~Vl~ele~c~~~~p~ 83 (109)
T d1rbli_ 7 KERRF-ETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFACAAPQQVLDEVRECRSEYGD 83 (109)
T ss_dssp CCCCC-STTTTSSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEECSSCCTTCCCHHHHHHHHHHHHHHCTT
T ss_pred CCccc-cccccCCCCCHHHHHHHHHHHHhCCCceeEEEccCCCccceeeeecccCcccCCCHHHHHHHHHHHHHhCCc
Confidence 34667 69999999999999999999998655 4 555 3566777777766543
No 2
>d1rrqa1 a.96.1.2 (A:9-229) Catalytic domain of MutY {Bacillus stearothermophilus [TaxId: 1422]}
Probab=58.59 E-value=3.8 Score=31.24 Aligned_cols=73 Identities=14% Similarity=0.082 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccchh
Q 027365 84 RDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLS 159 (224)
Q Consensus 84 ~Dp~i~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeAvEeFgGiL~~LrmeiDDl~Gls 159 (224)
+|..+.++++.|++. +|..|-..-..++++.+...+=-. .+..-.=.+.+.+++|+|.+-..+.+|-.|=|+.
T Consensus 42 ~~~~v~~~~~~L~~~~~t~~~la~a~~~~l~~~i~~~G~~~---ra~~l~~~~~~~~~~~~G~vp~~~~~Ll~LpGIG 116 (221)
T d1rrqa1 42 RVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYS---RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVG 116 (221)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHHSCHHHHHHHHTTSSCTH---HHHHHHHHHHHHHHHHTTCCCCSHHHHHTSTTCC
T ss_pred cHHHHHHHHHHHHHhcchHHHHHhhcHHHHHhhhccchhhh---hhHHHHHHHHHHhhhcCCCCchHHHHHHHHHHhh
Confidence 688899999999884 444443334456666666544322 2333333467889999998887777777777777
No 3
>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon Methanobacterium thermoformicicum [TaxId: 145262]}
Probab=55.81 E-value=3.9 Score=31.28 Aligned_cols=75 Identities=5% Similarity=0.125 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhccch
Q 027365 82 VIRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIGIIMNIKMEFDDEIGL 158 (224)
Q Consensus 82 ~i~Dp~i~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeA-vEeFgGiL~~LrmeiDDl~Gl 158 (224)
--+|..+..+++.|+.. +|..|-.+-..++++++...+=- ..--++..++|+. +++|||.+-.-+.||-.|=|+
T Consensus 45 qT~~~~v~~~~~~l~~~~pt~~~la~a~~~~l~~~i~~~G~~---~~KA~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGV 121 (217)
T d1keaa_ 45 RTTAGHVKKIYDKFFVKYKCFEDILKTPKSEIAKDIKEIGLS---NQRAEQLKELARVVINDYGGRVPRNRKAILDLPGV 121 (217)
T ss_dssp TSCHHHHHHHHHHHHHHCCSHHHHHHSCHHHHHHHTGGGSCH---HHHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTTC
T ss_pred cCcHHHHHHHHHHHHHhcccHHHHHHhhHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHhh
Confidence 34788999999999874 33433334445666666653311 2244667777775 567999888888888888887
Q ss_pred h
Q 027365 159 S 159 (224)
Q Consensus 159 s 159 (224)
.
T Consensus 122 G 122 (217)
T d1keaa_ 122 G 122 (217)
T ss_dssp C
T ss_pred h
Confidence 7
No 4
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=50.50 E-value=5.4 Score=30.34 Aligned_cols=94 Identities=12% Similarity=0.135 Sum_probs=60.9
Q ss_pred CCCCCCCcccccccccccccccCCCCCCCCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHH
Q 027365 55 IPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVF 132 (224)
Q Consensus 55 ~~~d~~~~~s~~~~~~R~fS~d~~hlP~i~Dp~i~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvf 132 (224)
.+.+.++||-.=++- ..| ..-+|.-+.++++.|+.. +|..+-..-..+++++++..+=- ...-+|..
T Consensus 22 ~~l~~~~p~~vli~~--iLs------qqT~~~~v~~~~~~l~~~~~t~~~la~a~~~~l~~~i~~~G~y---~~Ka~~l~ 90 (211)
T d2abka_ 22 TELNFSSPFELLIAV--LLS------AQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLY---NSKAENII 90 (211)
T ss_dssp CSSCCSSHHHHHHHH--HHT------TTSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHTTSTTH---HHHHHHHH
T ss_pred CCCCCCCHHHHHHHH--HHh------ccchHHHHHHHHHHHHHhccChHHHHhhhHhHhHHHHHHhhhh---hhHHHHHH
Confidence 345567787643321 122 345688999999999874 34444444455667777653321 23446777
Q ss_pred HHHH-HHHHHHHHHHHHhhhhhhccchh
Q 027365 133 SAAE-AVEEFIGIIMNIKMEFDDEIGLS 159 (224)
Q Consensus 133 rAAe-AvEeFgGiL~~LrmeiDDl~Gls 159 (224)
++|+ -+++|||.+-.-+.+|-.|=|+.
T Consensus 91 ~~a~~i~~~~~g~~p~~~~~L~~LpGVG 118 (211)
T d2abka_ 91 KTCRILLEQHNGEVPEDRAALEALPGVG 118 (211)
T ss_dssp HHHHHHHHHTTTSCCSCHHHHHHSTTCC
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHhhc
Confidence 7777 57899998888888888888877
No 5
>d1bxni_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Alcaligenes eutrophus [TaxId: 106590]}
Probab=47.99 E-value=9.9 Score=28.35 Aligned_cols=45 Identities=16% Similarity=0.403 Sum_probs=35.2
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHcccC-------------------CC-------chhHHHHHHhhhcccCC
Q 027365 76 DVAHMPVIRDPEIQRAFKDLMAADWG-------------------EL-------PASVIHDAKSALSRNND 120 (224)
Q Consensus 76 d~~hlP~i~Dp~i~~afKdLmA~sW~-------------------el-------p~svv~~ak~alSk~td 120 (224)
..+-||++.|-+|.+-+..|++-.|. .| ++.|+.+++.|++...+
T Consensus 7 tfSyLP~Ltd~~I~~QV~yll~qG~~i~iE~ad~r~~r~~yW~mw~lPmf~~~d~~~Vl~ele~c~~e~p~ 77 (129)
T d1bxni_ 7 TFSFLPELTDEQITKQLEYCLNQGWAVGLEYTDDPHPRNTYWEMFGLPMFDLRDAAGILMEINNARNTFPN 77 (129)
T ss_dssp BTTTSSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEESSSCBTTCCCHHHHHHHHHHHHHHCSS
T ss_pred eeccCCCCCHHHHHHHHHHHHHCCCEeeEEEecCcCcccchhhccccccccCCCHHHHHHHHHHHHHHCCc
Confidence 45689999999999999999987653 45 36777777777776554
No 6
>d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=47.59 E-value=35 Score=25.25 Aligned_cols=9 Identities=0% Similarity=-0.094 Sum_probs=4.6
Q ss_pred Hhhhhhhcc
Q 027365 148 IKMEFDDEI 156 (224)
Q Consensus 148 LrmeiDDl~ 156 (224)
|+..|++||
T Consensus 124 l~~~i~~L~ 132 (198)
T d1w07a2 124 ANDQLRSLY 132 (198)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 7
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=43.29 E-value=5.7 Score=27.32 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHcccC-------CCchhHHHHH
Q 027365 82 VIRDPEIQRAFKDLMAADWG-------ELPASVIHDA 111 (224)
Q Consensus 82 ~i~Dp~i~~afKdLmA~sW~-------elp~svv~~a 111 (224)
.|.|+.+-+.++.|+--+|= .|||.|+..|
T Consensus 35 ~I~d~~ls~lL~nL~k~~~iek~~~~Y~i~DPv~~~a 71 (73)
T d2fnaa1 35 EISDSEIYNYLTQLTKHSWIIKEGEKYCPSEPLISLA 71 (73)
T ss_dssp CCCHHHHHHHHHHHHHTTSEEESSSCEEESSHHHHHH
T ss_pred CCChHHHHHHHHHHHHcCceeecCCeeccCcHHHHHh
Confidence 58899999999999999994 5788887654
No 8
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=42.53 E-value=6.5 Score=29.76 Aligned_cols=75 Identities=11% Similarity=0.112 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhccch
Q 027365 82 VIRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIGIIMNIKMEFDDEIGL 158 (224)
Q Consensus 82 ~i~Dp~i~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeA-vEeFgGiL~~LrmeiDDl~Gl 158 (224)
.-+|.-+.++++.|+.. +|.++-..-..++.+.+...+= .....+|..++|+. +|+|||.+-.-+.+|-.|=|+
T Consensus 42 qT~~~~v~~~~~~l~~~~pt~~~la~~~~~e~~~~i~~~g~---y~~ka~~l~~~a~~i~~~~~g~vp~~~~~L~~LpGV 118 (214)
T d1orna_ 42 QCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGL---YRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGV 118 (214)
T ss_dssp TSCHHHHHHHHHHHHHHCCSHHHHHSSCHHHHHHHTGGGSS---HHHHHHHHHHHHHHHHHHSTTSCCSCHHHHTTSTTC
T ss_pred cChHHHHHHHHhhhhcccCchhhhhhccHHHhhhhhhhhhh---hhHHHHHHHHHhhhHHHHhCCCCCCCHHHHHhCcCc
Confidence 45788899999999886 4444434444566666655321 13355688888764 789999777767777777777
Q ss_pred h
Q 027365 159 S 159 (224)
Q Consensus 159 s 159 (224)
.
T Consensus 119 G 119 (214)
T d1orna_ 119 G 119 (214)
T ss_dssp C
T ss_pred c
Confidence 6
No 9
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.64 E-value=8.5 Score=23.73 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=24.3
Q ss_pred HHHHHHHH-HHHHHHhhhhhhccchhHHHHHHHHHh
Q 027365 135 AEAVEEFI-GIIMNIKMEFDDEIGLSVYQRYATYLD 169 (224)
Q Consensus 135 AeAvEeFg-GiL~~LrmeiDDl~Glsay~rY~~YLd 169 (224)
.++|++|| +-=..+-..+..=.+-...+||..||+
T Consensus 15 ~~~v~~~g~~~W~~Ia~~l~~Rt~~qc~~Rw~~~L~ 50 (52)
T d1gvda_ 15 IKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLN 50 (52)
T ss_dssp HHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTS
T ss_pred HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCC
Confidence 46788898 544444455555555568999999986
No 10
>d1svdm1 d.73.1.1 (M:3-110) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Halothiobacillus neapolitanus [TaxId: 927]}
Probab=39.65 E-value=9.2 Score=27.78 Aligned_cols=30 Identities=20% Similarity=0.455 Sum_probs=25.6
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHcccC
Q 027365 71 RSFSEDVAHMPVIRDPEIQRAFKDLMAADWG 101 (224)
Q Consensus 71 R~fS~d~~hlP~i~Dp~i~~afKdLmA~sW~ 101 (224)
+.| |+.+-||+++|.+|.+-...|++-.|.
T Consensus 9 ~~~-eTfSyLP~Ltde~I~~QV~yll~qGw~ 38 (108)
T d1svdm1 9 LKY-ETFSYLPPMNAERIRAQIKYAIAQGWS 38 (108)
T ss_dssp CCC-STTTTSCCCCHHHHHHHHHHHHHTTCE
T ss_pred ccc-cccccCCCCCHHHHHHHHHHHHHCCCE
Confidence 444 588999999999999999999987663
No 11
>d1wdds_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=34.95 E-value=12 Score=27.82 Aligned_cols=30 Identities=17% Similarity=0.516 Sum_probs=26.1
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHcccC
Q 027365 71 RSFSEDVAHMPVIRDPEIQRAFKDLMAADWG 101 (224)
Q Consensus 71 R~fS~d~~hlP~i~Dp~i~~afKdLmA~sW~ 101 (224)
|.| |+.|-||+++|.+|.+-..-|++--|.
T Consensus 10 ~k~-ETfSyLP~ltd~qI~~QI~yll~qGw~ 39 (122)
T d1wdds_ 10 KKF-ETLSYLPPLTVEDLLKQIEYLLRSKWV 39 (122)
T ss_dssp CCC-STTTTSSCCCHHHHHHHHHHHHHTTCE
T ss_pred ccc-eeeccCCCCCHHHHHHHHHHHHHCCCe
Confidence 344 588999999999999999999998883
No 12
>d1r2fa_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Salmonella typhimurium [TaxId: 90371]}
Probab=34.92 E-value=86 Score=23.92 Aligned_cols=55 Identities=15% Similarity=0.186 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHH
Q 027365 82 VIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVE 139 (224)
Q Consensus 82 ~i~Dp~i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeAvE 139 (224)
.|.|+......|...+.-|..=.=++-+|.+.- .+-|++ -|+++++++..--..+
T Consensus 8 ~~~d~~~~~~y~k~~~~fW~peEi~l~~D~~dw-~~Lt~~--Er~~~~~~l~~~~~~D 62 (283)
T d1r2fa_ 8 KIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLSAA--EQQLTIRVFTGLTLLD 62 (283)
T ss_dssp SCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHH-HTSCHH--HHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHhCCCCCcccChHhhHHHH-hhCCHH--HHHHHHHHHHHHHHHH
Confidence 578999999999999999976554555565553 343444 4888888855433333
No 13
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.32 E-value=35 Score=25.98 Aligned_cols=51 Identities=20% Similarity=0.378 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHH---------------HHHHHHHHHHHHhhhhhhccchhHHHHHHHHHhh-cCCCh
Q 027365 123 AGQEVLKNVFSAAE---------------AVEEFIGIIMNIKMEFDDEIGLSVYQRYATYLDA-FGPDE 175 (224)
Q Consensus 123 aGqeaL~nvfrAAe---------------AvEeFgGiL~~LrmeiDDl~Glsay~rY~~YLds-FgpdE 175 (224)
+.-++|.|+++.++ .+||.|| +..|. +|-+.---..|++-..-|+. |+.||
T Consensus 436 ~~L~~l~~ll~~~~~~~~~~~~~~~~~~~~iee~g~-~~~i~-~Lq~~~~~~i~~~A~~il~~~f~~~~ 502 (503)
T d1wa5b_ 436 VTLDALENILKMGEADKEARGLNINENADFIEKAGG-MEKIF-NCQQNENDKIYEKAYKIIETYFGEEE 502 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTH-HHHHH-GGGGCSCHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHCCC-HHHHH-HHHcCCCHHHHHHHHHHHHHHcCCcC
Confidence 34567888887654 4666666 22221 12111112267777777775 66665
No 14
>d2ddha2 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.20 E-value=92 Score=22.50 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=18.4
Q ss_pred HHHhhhhhhccchhHHHHHHHHHhhcCCChhHHH
Q 027365 146 MNIKMEFDDEIGLSVYQRYATYLDAFGPDESYLR 179 (224)
Q Consensus 146 ~~LrmeiDDl~Glsay~rY~~YLdsFgpdE~yLr 179 (224)
..|+.+|.+||.- .=.-=+...|+||+.+..|+
T Consensus 112 ~~i~~~i~~L~~~-lrp~Av~LVDaF~~~D~~L~ 144 (181)
T d2ddha2 112 SQVNARILELLTL-IRPNAVALVDAFDFKDMTLG 144 (181)
T ss_dssp HHHHHHHHHHHHH-HGGGHHHHHHTTCCCHHHHT
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhHhcCCCHHHHc
Confidence 4566666666652 11112345677777777664
No 15
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=28.96 E-value=27 Score=22.89 Aligned_cols=40 Identities=8% Similarity=0.192 Sum_probs=31.0
Q ss_pred CCCCCCCHHHHHHHHHHHHcccCC-CchhHHHHHHhhhcccCC
Q 027365 79 HMPVIRDPEIQRAFKDLMAADWGE-LPASVIHDAKSALSRNND 120 (224)
Q Consensus 79 hlP~i~Dp~i~~afKdLmA~sW~e-lp~svv~~ak~alSk~td 120 (224)
...+|+--+|++.++ ...+|.. +|++|.+-.|+...++++
T Consensus 122 ~~~~ISST~IR~~i~--~g~~i~~lVP~~V~~yI~e~~~~~~~ 162 (163)
T d1o6ba_ 122 QYSFLSSSIVKEVAR--YDGSVSEFVPPEVELALQQKFRQGGS 162 (163)
T ss_dssp TTTTCCHHHHHHHHH--TTCCCTTTSCHHHHHHHHHHHHSCSC
T ss_pred hhhccCHHHHHHHHH--cCCChHHhCCHHHHHHHHHHHhccCC
Confidence 345689899998765 3567888 599999999988877653
No 16
>d1m7ka_ a.7.7.1 (A:) Silencer of death domains, Sodd (Bag4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.43 E-value=45 Score=22.48 Aligned_cols=30 Identities=33% Similarity=0.544 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHH------------HHHHHhhhhhhc
Q 027365 126 EVLKNVFSAAEAVEEFIG------------IIMNIKMEFDDE 155 (224)
Q Consensus 126 eaL~nvfrAAeAvEeFgG------------iL~~LrmeiDDl 155 (224)
+++..|=.....|+.|.| +|+.+-+.||.+
T Consensus 10 ~i~~~v~~l~~~V~~f~g~~~dke~~~L~E~L~~~llkLD~I 51 (81)
T d1m7ka_ 10 HVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSV 51 (81)
T ss_dssp HHHHHHHHHHHHHHHCCSCTTSHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHhCCc
Confidence 344444455555555555 566666777765
No 17
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.85 E-value=24 Score=21.14 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=22.2
Q ss_pred HHHHHHHH-HHHHHHhhhhhhccchhHHHHHHHHHh
Q 027365 135 AEAVEEFI-GIIMNIKMEFDDEIGLSVYQRYATYLD 169 (224)
Q Consensus 135 AeAvEeFg-GiL~~LrmeiDDl~Glsay~rY~~YLd 169 (224)
.++|+++| |--..+-..+..=.+...-.||..||+
T Consensus 13 ~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~ 48 (50)
T d1guua_ 13 KKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 48 (50)
T ss_dssp HHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHHHHHS
T ss_pred HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCC
Confidence 45677787 434444444444444558899999996
No 18
>d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.22 E-value=54 Score=25.55 Aligned_cols=90 Identities=18% Similarity=0.290 Sum_probs=44.3
Q ss_pred chhHHHHHHhhhcccCCchhHHHHHHHHHHH-HHHHHHHH---HHHHHHhhhhhhcc-chh----HHHHHHHHHhhcCCC
Q 027365 104 PASVIHDAKSALSRNNDDKAGQEVLKNVFSA-AEAVEEFI---GIIMNIKMEFDDEI-GLS----VYQRYATYLDAFGPD 174 (224)
Q Consensus 104 p~svv~~ak~alSk~tdDkaGqeaL~nvfrA-AeAvEeFg---GiL~~LrmeiDDl~-Gls----ay~rY~~YLdsFgpd 174 (224)
-+.++..++.+.+...++..-.+.|..+... -+.+++.. -.+.++..+|++++ |+. ...|..+|+-+||+-
T Consensus 46 Td~Ll~~~~~a~~~~~~~~~~~~~l~~i~~~h~~~~~~l~~~~~~~~~~~~~l~~~l~~i~~~~~~s~~~~D~ils~GE~ 125 (304)
T d2cdqa1 46 TNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGEC 125 (304)
T ss_dssp HHHHHHHHHHHTTTCTTTGGGCHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcchhhhhhhhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhccccccchhhHHHHHHhHHH
Confidence 3456667777777766666555555443321 11122211 11222222222221 111 224666788888853
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhhcCCCCCc
Q 027365 175 ESYLRKKVETELGSKMIFLKMRCAGLGSEW 204 (224)
Q Consensus 175 E~yLrKKVE~ELGtkmI~LKmRcsGlgseW 204 (224)
|-++++..-.|-.|+.+.|
T Consensus 126 -----------lSa~ll~~~L~~~gi~a~~ 144 (304)
T d2cdqa1 126 -----------LSTRIFAAYLNTIGVKARQ 144 (304)
T ss_dssp -----------HHHHHHHHHHHHTTCCEEE
T ss_pred -----------HHHHHHHHHHHHcCCceEE
Confidence 4455555555666776554
No 19
>d1k9xa_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=25.66 E-value=46 Score=28.39 Aligned_cols=45 Identities=18% Similarity=0.377 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHH------HHHHHhhhhhhccchhHHHHHHHHHhhcCCC
Q 027365 129 KNVFSAAEAVEEFIG------IIMNIKMEFDDEIGLSVYQRYATYLDAFGPD 174 (224)
Q Consensus 129 ~nvfrAAeAvEeFgG------iL~~LrmeiDDl~Glsay~rY~~YLdsFgpd 174 (224)
.++|+.|++---|.- .|+.|+.|+-+..|-.. ..|-+-||.|.|+
T Consensus 114 ~~~W~~AR~~nDf~~f~P~Leklv~L~re~A~~l~~~~-~pYDaLLd~yEpg 164 (497)
T d1k9xa_ 114 TKAWEEAKAKDDFSKFEPWLDKIISLAKRAAEYLGYEE-EPYDALLDLYEEG 164 (497)
T ss_dssp HHHHHHHHHTTCGGGTHHHHHHHHHHHHHHHHHHCCSS-CHHHHHHHHHSTT
T ss_pred HHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHhcCCC-CchhhHHHhhCCC
Confidence 578999887655554 57788888888888543 6799999999985
No 20
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.93 E-value=37 Score=24.23 Aligned_cols=12 Identities=8% Similarity=0.157 Sum_probs=9.2
Q ss_pred HHHHHhhhhhhc
Q 027365 144 IIMNIKMEFDDE 155 (224)
Q Consensus 144 iL~~LrmeiDDl 155 (224)
+|+.+...||.+
T Consensus 64 ~L~~~LlkLD~I 75 (111)
T d1uk5a_ 64 YLTKELLALDSV 75 (111)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHhcCc
Confidence 677788888876
No 21
>d1kg2a_ a.96.1.2 (A:) Catalytic domain of MutY {Escherichia coli [TaxId: 562]}
Probab=24.46 E-value=19 Score=27.16 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhhccchh
Q 027365 83 IRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAE-AVEEFIGIIMNIKMEFDDEIGLS 159 (224)
Q Consensus 83 i~Dp~i~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAe-AvEeFgGiL~~LrmeiDDl~Gls 159 (224)
-+|.-+..+++.|+.. +|.+|-.+-..++++.+...+=-. -+ ++..++|+ .+++|+|.+-..+.+|-.|=|+.
T Consensus 43 T~~~~v~~~~~~l~~~~pt~~~la~a~~~~l~~~i~~~g~~~---ka-~~l~~~~~~i~~~~~g~vp~~~~~L~~LpGVG 118 (224)
T d1kg2a_ 43 TQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA---RA-RNLHKAAQQVATLHGGKFPETFEEVAALPGVG 118 (224)
T ss_dssp SCHHHHHHHHHHHHHHCSSHHHHHHSCHHHHHHHHTTSCCTH---HH-HHHHHHHHHHHHHSTTSCCCSHHHHHTSTTCC
T ss_pred CcHHHHHHHHHHHHHHhccHHHHHHhhHHHHHhHhhhhhHHH---HH-HHHHHhhhhhhhhccCCcchHHHHHHHHHhhh
Confidence 3678889999999865 333333333456666666644221 11 55555555 46789998888888888887776
No 22
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}
Probab=24.22 E-value=97 Score=24.33 Aligned_cols=60 Identities=20% Similarity=0.157 Sum_probs=42.8
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHccc----CCCchhHHHHHHhhhccc--CCc-----hhHHHHHHHHHHHHHHHH
Q 027365 76 DVAHMPVIRDPEIQRAFKDLMAADW----GELPASVIHDAKSALSRN--NDD-----KAGQEVLKNVFSAAEAVE 139 (224)
Q Consensus 76 d~~hlP~i~Dp~i~~afKdLmA~sW----~elp~svv~~ak~alSk~--tdD-----kaGqeaL~nvfrAAeAvE 139 (224)
.++| .+|+|.+|+++-+..-+ .-+.+..++-|++-+... .-| ..|-||.+++.|.|++..
T Consensus 54 ~lGh----~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e~Alk~Ar~~t 124 (431)
T d1zoda1 54 VLGH----CHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVT 124 (431)
T ss_dssp TTCB----TCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred hhcC----CCHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHhCCcccceeeecccccchHHHHHHHHHHhc
Confidence 4556 68999999999887544 234566666677655432 223 469999999999999884
No 23
>d2j9ua1 a.24.28.1 (A:148-241) Vacuolar protein sorting-associated protein 28, VPS28 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.18 E-value=21 Score=25.43 Aligned_cols=54 Identities=19% Similarity=0.255 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccchh-HHHHHHHHHhhcCCChhHHHHHHHHhh
Q 027365 133 SAAEAVEEFIGIIMNIKMEFDDEIGLS-VYQRYATYLDAFGPDESYLRKKVETEL 186 (224)
Q Consensus 133 rAAeAvEeFgGiL~~LrmeiDDl~Gls-ay~rY~~YLdsFgpdE~yLrKKVE~EL 186 (224)
-.||+++-|..++++||+.+-.-=-|- --.--+.-|+.++|..-==|.||..-|
T Consensus 5 ~Vae~~~~FIT~mDaLkL~~~a~DqLhPlL~dL~~slnrl~~~dfegk~kv~~Wl 59 (94)
T d2j9ua1 5 YVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVTRDDFENRSKLIDWI 59 (94)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcchhhhchhHHHHHHHHHhcCccccchHHHHHHHH
Confidence 368999999999999999753211111 011112334445565555566776644
No 24
>d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia trachomatis [TaxId: 813]}
Probab=23.74 E-value=1.5e+02 Score=22.70 Aligned_cols=109 Identities=16% Similarity=0.159 Sum_probs=68.6
Q ss_pred cccccccc---ccCCCCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHH
Q 027365 67 IGCNRSFS---EDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIG 143 (224)
Q Consensus 67 ~~~~R~fS---~d~~hlP~i~Dp~i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeAvEeFgG 143 (224)
+..+|.|- .|+-.+=+|+.|++.+-+|..++.-|..=.=++-+|++.-=+ +.-+..-|++++.++...-..+..-|
T Consensus 14 ~~~~~~~~~~~~~~~~l~p~kYp~~~~~yk~~~~~fW~peEi~ls~D~~dw~~-~kL~~~e~~~~~~~l~~~~~~d~~v~ 92 (317)
T d1syya_ 14 LNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKS-DRLSEDERRVILLNLGFFSTAESLVG 92 (317)
T ss_dssp GGGCCSSSCCSSCTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCHHHHHHHHS-SCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeeCCCCCchhhcCCCCCHHHHHHHHHHHHcCCCccccCccccHHHHhh-CCCCHHHHHHHHHHHHHHHHHhhHHh
Confidence 45566543 455577789999999999999999998766667777765411 22345678888888866555554444
Q ss_pred H-H-HHHhhhhhh-----ccchh-----HHHH-HHHHHhhcCCChh
Q 027365 144 I-I-MNIKMEFDD-----EIGLS-----VYQR-YATYLDAFGPDES 176 (224)
Q Consensus 144 i-L-~~LrmeiDD-----l~Gls-----ay~r-Y~~YLdsFgpdE~ 176 (224)
. + ..+.-.+.+ ..+.- .|.+ |...++++++|+.
T Consensus 93 ~~~~~~l~~~i~~pE~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~ 138 (317)
T d1syya_ 93 NNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEK 138 (317)
T ss_dssp HHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHH
T ss_pred hhhHhhhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 1 2 122222111 11111 3443 7889999998754
No 25
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=22.58 E-value=24 Score=28.97 Aligned_cols=50 Identities=22% Similarity=0.302 Sum_probs=32.7
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHc---ccCCCch----hHHHHHHhhhcccCCchhHH
Q 027365 76 DVAHMPVIRDPEIQRAFKDLMAA---DWGELPA----SVIHDAKSALSRNNDDKAGQ 125 (224)
Q Consensus 76 d~~hlP~i~Dp~i~~afKdLmA~---sW~elp~----svv~~ak~alSk~tdDkaGq 125 (224)
.+.++|.....||..|++..-++ +|..+|. ++...+...|.++.|+.+.-
T Consensus 42 ~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 98 (499)
T d1ky8a_ 42 TIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEV 98 (499)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 45677888888888777544322 6888876 45666666676666555443
No 26
>d1bwvs_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
Probab=22.05 E-value=31 Score=25.95 Aligned_cols=26 Identities=12% Similarity=0.387 Sum_probs=22.9
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHcccC
Q 027365 76 DVAHMPVIRDPEIQRAFKDLMAADWG 101 (224)
Q Consensus 76 d~~hlP~i~Dp~i~~afKdLmA~sW~ 101 (224)
..+-||+++|.+|.+-...|++-.|.
T Consensus 7 tfSyLP~LtdeqI~~QV~yll~qGw~ 32 (138)
T d1bwvs_ 7 TFSFLPDLTDEQIKKQIDYMISKKLA 32 (138)
T ss_dssp TTTTSCCCCHHHHHHHHHHHHHTTCE
T ss_pred eeccCCCCCHHHHHHHHHHHHcCCCE
Confidence 56689999999999999999997763
No 27
>d1gk8i_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=21.16 E-value=29 Score=25.98 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=25.4
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHcccC
Q 027365 75 EDVAHMPVIRDPEIQRAFKDLMAADWG 101 (224)
Q Consensus 75 ~d~~hlP~i~Dp~i~~afKdLmA~sW~ 101 (224)
|+.|-||+++|.+|.+-..=++.-.|.
T Consensus 13 ETfSyLPpLtdeqI~kQI~Y~i~~GW~ 39 (126)
T d1gk8i_ 13 ETFSYLPPLTDEQIAAQVDYIVANGWI 39 (126)
T ss_dssp STTTTSSCCCHHHHHHHHHHHHHTTCE
T ss_pred eecccCCCCCHHHHHHHHHHHHhcCCc
Confidence 589999999999999999999999995
No 28
>d1ig6a_ a.4.3.1 (A:) MRF-2 DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.24 E-value=40 Score=22.91 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHH--HHH--Hhhhhhhccchh----
Q 027365 88 IQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGI--IMN--IKMEFDDEIGLS---- 159 (224)
Q Consensus 88 i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAeAvEeFgGi--L~~--LrmeiDDl~Gls---- 159 (224)
....+.+.|+.....++..- -..|++ -|.|+-=.+|.++||- +.. .=.+|-..+|+.
T Consensus 7 Fl~~L~~F~~~rg~~~~~~P-------------~i~gk~--vDL~~Ly~~V~~~GG~~~V~~~~~W~~ia~~lg~~~~~~ 71 (107)
T d1ig6a_ 7 FLVALYKYMKERKTPIERIP-------------YLGFKQ--INLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGST 71 (107)
T ss_dssp HHHHHHHHHHTTTCCGGGCC-------------CSSSSS--CCHHHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCT
T ss_pred HHHHHHHHHHHcCCCCCcCC-------------eECCcc--ccHHHHHHHHHHhCChhhccccccHHHHHHHhCCCCCCC
Confidence 34556666776665543211 122333 2678888889999992 222 123454555552
Q ss_pred -----HHHHHHHHHhhcCCChhHHHH
Q 027365 160 -----VYQRYATYLDAFGPDESYLRK 180 (224)
Q Consensus 160 -----ay~rY~~YLdsFgpdE~yLrK 180 (224)
.=+-|.+||..| |.|++.
T Consensus 72 ~~~~~Lk~~Y~~~L~~y---E~~~~~ 94 (107)
T d1ig6a_ 72 SAATCTRRHYERLILPY---ERFIKG 94 (107)
T ss_dssp TTTTTHHHHHHHHTTTT---HHHHHH
T ss_pred CHHHHHHHHHHHHHHHH---HHHHhc
Confidence 445588889888 667664
No 29
>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
Probab=20.19 E-value=77 Score=25.15 Aligned_cols=55 Identities=20% Similarity=0.200 Sum_probs=37.4
Q ss_pred CCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHH
Q 027365 80 MPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAE 136 (224)
Q Consensus 80 lP~i~Dp~i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkaGqeaL~nvfrAAe 136 (224)
|=.|+-|++.+..|+..+.-|..=.=++-+|++.--++-|+ .-|+++++++..--
T Consensus 63 ~~PikY~~~~~~Ykk~~~~fW~peEIdls~D~~dw~~~Lt~--~Er~~i~~il~ffa 117 (334)
T d1jk0a_ 63 LFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNE--NERFFISRVLAFFA 117 (334)
T ss_dssp CCSCSCHHHHHHHHHHHTTCCCGGGCCCTTHHHHHHHTCCH--HHHHHHHHHHHHHH
T ss_pred EeCCcCHHHHHHHHHHHHcCCCchhccCcCCHHHHhhcCCH--HHHHHHHHHHHHHH
Confidence 44589999999999999999986555555665543223233 35678888766433
Done!