Query 027366
Match_columns 224
No_of_seqs 132 out of 1036
Neff 2.3
Searched_HMMs 46136
Date Fri Mar 29 08:53:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027366.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027366hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02800 imidazoleglycerol-pho 100.0 3.2E-57 6.9E-62 398.6 13.4 160 23-222 12-178 (261)
2 COG0131 HisB Imidazoleglycerol 100.0 1E-54 2.2E-59 370.5 9.2 116 79-222 2-117 (195)
3 PRK00951 hisB imidazoleglycero 100.0 3E-54 6.5E-59 366.4 9.9 115 80-222 2-116 (195)
4 PRK13598 hisB imidazoleglycero 100.0 5.1E-54 1.1E-58 364.9 10.8 115 80-222 2-116 (193)
5 cd07914 IGPD Imidazoleglycerol 100.0 3.5E-53 7.5E-58 358.8 9.4 112 83-222 1-112 (190)
6 PRK05446 imidazole glycerol-ph 100.0 5.5E-50 1.2E-54 359.3 9.9 116 78-222 163-278 (354)
7 KOG3143 Imidazoleglycerol-phos 100.0 1.9E-47 4.2E-52 327.9 3.7 135 45-222 6-140 (219)
8 PF00475 IGPD: Imidazoleglycer 100.0 9E-43 2E-47 285.4 4.2 85 110-222 1-85 (145)
9 PRK05446 imidazole glycerol-ph 96.7 0.0019 4.2E-08 59.3 4.4 71 81-155 254-334 (354)
10 PLN02800 imidazoleglycerol-pho 96.4 0.0053 1.2E-07 55.6 5.0 72 81-155 153-236 (261)
11 PRK13598 hisB imidazoleglycero 96.3 0.0047 1E-07 53.8 4.2 72 81-155 91-173 (193)
12 cd07914 IGPD Imidazoleglycerol 96.3 0.0052 1.1E-07 53.3 4.3 72 81-155 87-169 (190)
13 PRK00951 hisB imidazoleglycero 96.2 0.01 2.2E-07 51.7 5.4 73 80-155 90-173 (195)
14 PF00475 IGPD: Imidazoleglycer 95.6 0.032 6.9E-07 46.8 5.8 73 80-155 59-142 (145)
15 COG0131 HisB Imidazoleglycerol 94.2 0.053 1.2E-06 47.7 3.7 64 89-155 100-174 (195)
16 KOG3143 Imidazoleglycerol-phos 73.6 2.6 5.7E-05 37.7 2.4 66 88-155 122-197 (219)
17 TIGR00321 dhys deoxyhypusine s 42.3 15 0.00033 33.9 1.7 79 95-209 47-125 (301)
18 PRK02492 deoxyhypusine synthas 39.6 16 0.00035 34.5 1.4 83 92-207 57-139 (347)
19 PRK01221 putative deoxyhypusin 38.4 17 0.00038 33.7 1.4 80 95-208 56-135 (312)
20 PRK00805 putative deoxyhypusin 37.8 17 0.00038 34.0 1.3 83 92-209 45-127 (329)
21 PRK02301 putative deoxyhypusin 37.7 17 0.00036 33.9 1.2 83 92-209 56-138 (316)
22 smart00113 CALCITONIN calciton 29.8 41 0.0009 23.0 1.8 28 172-206 1-28 (38)
23 PRK00132 rpsI 30S ribosomal pr 28.5 1.4E+02 0.0031 24.5 5.1 50 83-136 8-69 (130)
24 PRK00770 deoxyhypusine synthas 27.2 25 0.00055 33.5 0.6 82 93-208 51-133 (384)
25 PF13083 KH_4: KH domain; PDB: 27.1 54 0.0012 23.1 2.1 42 114-155 3-46 (73)
26 COG1899 DYS1 Deoxyhypusine syn 25.7 49 0.0011 31.4 2.2 82 91-207 52-134 (318)
27 COG1255 Uncharacterized protei 24.9 81 0.0017 26.7 3.0 28 103-132 14-41 (129)
28 PRK03971 putative deoxyhypusin 24.9 25 0.00055 33.0 0.1 79 92-206 65-144 (334)
29 cd04483 hOBFC1_like hOBFC1_lik 23.5 1.2E+02 0.0026 22.9 3.5 22 85-107 7-28 (92)
30 PF08502 LeuA_dimer: LeuA allo 22.1 3.9E+02 0.0084 20.9 6.5 51 84-134 28-80 (133)
31 KOG2559 Predicted pseudouridin 21.0 9.3 0.0002 35.9 -3.5 60 126-218 206-265 (318)
No 1
>PLN02800 imidazoleglycerol-phosphate dehydratase
Probab=100.00 E-value=3.2e-57 Score=398.55 Aligned_cols=160 Identities=71% Similarity=0.957 Sum_probs=140.1
Q ss_pred eeccCcccccccccccccccccc-------hhhcccccCCccCCCCCCCCCCCCCCcCCCCCCCCceEEEEeeeCCeEEE
Q 027366 23 LVKPKTNLSRKLLPISTQYCSST-------RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVS 95 (224)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~R~~~v~R~TkET~I~ 95 (224)
+++|+++ ++.++|.++.+.++. ++++. +++++++|++ ..+++..+.|+++++|+||||+|+
T Consensus 12 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~R~a~v~R~TkET~I~ 79 (261)
T PLN02800 12 LLRPKLS-FIDLLPRRAAIVSSPSSSLPRFLRMES--QLRQSISCAA---------SSSSSNALGRIGEVKRVTKETNVS 79 (261)
T ss_pred hcCCCcc-ccccccccccccccccccccccccccc--ccCCCccccc---------ccCCCCccceeEEEEecccceEEE
Confidence 4789998 788888887766553 22222 3344444433 445555578999999999999999
Q ss_pred EEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCccccccccccceee
Q 027366 96 VKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEMKFCC 175 (224)
Q Consensus 96 V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~~~~~ 175 (224)
|+|||||+|.++++||||||||||++||+||+|||+|+|+||+|||+|||+|||||+|||
T Consensus 80 v~l~LDG~G~~~i~TGi~FlDHML~~~a~Hg~fdL~V~a~GDl~vD~HHtvEDvgI~LG~-------------------- 139 (261)
T PLN02800 80 VKINLDGTGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDLWIDDHHTNEDVALAIGT-------------------- 139 (261)
T ss_pred EEEEeCCCCceeeecCccHHHHHHHHHHHHcCCCeEEEEecCccccCCCchhhhhhhHHH--------------------
Confidence 999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhHHHHHHHHHhCCccccccccceeccccccceEEEEEecCceee
Q 027366 176 IISTFVVQALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL 222 (224)
Q Consensus 176 ~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL~~v~lD~sg~~~~ 222 (224)
||+||||||+||+|||++++||||||++|+||+|||-.+
T Consensus 140 --------Al~~ALGdk~GI~RyG~a~vPMDEALa~vavDlSGRpyl 178 (261)
T PLN02800 140 --------ALLKALGDRKGINRFGDFSAPLDEALIEVVLDLSGRPYL 178 (261)
T ss_pred --------HHHHHhcCccccceeEeeeecccceeEEEEEECCCCCce
Confidence 999999999999999999999999999999999999765
No 2
>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-54 Score=370.49 Aligned_cols=116 Identities=52% Similarity=0.807 Sum_probs=113.8
Q ss_pred CCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeeccccccc
Q 027366 79 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTI 158 (224)
Q Consensus 79 ~~R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~ 158 (224)
.+|++++.|+||||+|+|+||+||+|+.+++||||||||||+||++||+|||.|+|+||++||||||+||+||+|||
T Consensus 2 ~~R~a~v~R~T~ET~I~V~i~lDg~G~~~i~TGv~FfDHML~~~a~H~~~dl~V~a~GDl~iDdHHtvED~gIaLGq--- 78 (195)
T COG0131 2 AMRTAEVTRKTKETDIEVSLDLDGTGKSKIDTGVGFFDHMLDQLARHGGFDLEVSAKGDLHIDDHHTVEDTGIALGQ--- 78 (195)
T ss_pred CCceeEEEecccceEEEEEEEcCCCCceeecCCCchHHHHHHHHHHhCCCceEEEEccCccccccchHHHHHHHHHH---
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccceeeehhhHHHHHHHHHhCCccccccccceeccccccceEEEEEecCceee
Q 027366 159 QNGVSCFLCSSEMKFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL 222 (224)
Q Consensus 159 q~~~s~~~~~~~~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL~~v~lD~sg~~~~ 222 (224)
||+||||||+||+|||.+++||||||++|+||+|||-.+
T Consensus 79 -------------------------Al~~AlGdk~GI~Rfg~~~vPMDEaL~~~~vDlSGRp~l 117 (195)
T COG0131 79 -------------------------ALKEALGDKRGIRRFGSAYVPMDEALARVAVDLSGRPYL 117 (195)
T ss_pred -------------------------HHHHHhcccccceecccccccchhhhheeEEecCCCeeE
Confidence 999999999999999999999999999999999999765
No 3
>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated
Probab=100.00 E-value=3e-54 Score=366.41 Aligned_cols=115 Identities=56% Similarity=0.869 Sum_probs=113.0
Q ss_pred CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccc
Q 027366 80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQ 159 (224)
Q Consensus 80 ~R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q 159 (224)
+|+++++|+||||+|+|+|||||+|+++|+||||||||||++||+||+|||+|+|+||++||+|||+||+||+||+
T Consensus 2 ~R~a~v~R~T~ET~I~v~l~LDG~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~---- 77 (195)
T PRK00951 2 MRTAEVERKTKETDISVELNLDGTGKSDIDTGVGFLDHMLDQFARHGLFDLTVKAKGDLHIDDHHTVEDVGIVLGQ---- 77 (195)
T ss_pred CceEEEEEcccceEEEEEEEeCCCCccceeCCccHHHHHHHHHHHHcCCCeEEEEecCccccCCchHHHHHHHHHH----
Confidence 4999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccccccceeeehhhHHHHHHHHHhCCccccccccceeccccccceEEEEEecCceee
Q 027366 160 NGVSCFLCSSEMKFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL 222 (224)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL~~v~lD~sg~~~~ 222 (224)
||+||||||+||+|||++++||||||++|+||+|||-.+
T Consensus 78 ------------------------al~~aLgdk~GI~Ryg~a~~PMDEaL~~v~vDlSGRpyl 116 (195)
T PRK00951 78 ------------------------ALKEALGDKKGIRRYGHAYVPMDEALARVAVDLSGRPYL 116 (195)
T ss_pred ------------------------HHHHHhcCccccceeEeeeechhheeEEEEEECCCCCeE
Confidence 999999999999999999999999999999999999765
No 4
>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional
Probab=100.00 E-value=5.1e-54 Score=364.94 Aligned_cols=115 Identities=39% Similarity=0.551 Sum_probs=112.8
Q ss_pred CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccc
Q 027366 80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQ 159 (224)
Q Consensus 80 ~R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q 159 (224)
.|+++++|+||||+|+|+|||||+|+++|+||||||||||++||+||+|||+|+|+||+|||+|||+||+||+||+
T Consensus 2 ~R~a~i~R~T~ET~I~v~l~Ldg~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~---- 77 (193)
T PRK13598 2 SRNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPYDDHHIVEDVAITLGL---- 77 (193)
T ss_pred cceEEEEEcccceEEEEEEEeCCCCceEEecCCchHHHHHHHHHHHcCCCeEEEEecCccccCCCchhhhhhhHHH----
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccccccceeeehhhHHHHHHHHHhCCccccccccceeccccccceEEEEEecCceee
Q 027366 160 NGVSCFLCSSEMKFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL 222 (224)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL~~v~lD~sg~~~~ 222 (224)
||+||||||+||+|||++++||||||++|+||+|||-.+
T Consensus 78 ------------------------al~~Algdk~gI~RyG~a~vPMDEaLa~~~vDlsGRpyl 116 (193)
T PRK13598 78 ------------------------AIKEALGDKRGIKRFSHQIIPMDEALVLVSLDISGRGMA 116 (193)
T ss_pred ------------------------HHHHHhcCcccceeeecceecchheeeEEEEEcCCCCeE
Confidence 999999999999999999999999999999999999765
No 5
>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase. Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and s
Probab=100.00 E-value=3.5e-53 Score=358.77 Aligned_cols=112 Identities=49% Similarity=0.798 Sum_probs=109.6
Q ss_pred EEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCc
Q 027366 83 GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGV 162 (224)
Q Consensus 83 ~~v~R~TkET~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~ 162 (224)
++++|+||||+|+|+|||||+|+++++||||||||||+|||+||+|||.|+|+||++||+|||+||+||+||+
T Consensus 1 a~v~R~T~ET~I~v~l~LDg~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~------- 73 (190)
T cd07914 1 AEIERKTKETDIEVELNLDGTGKSKIDTGIGFFDHMLTLFARHGGFDLTVKAKGDLEVDDHHTVEDVGIVLGQ------- 73 (190)
T ss_pred CeeEecccceEEEEEEEeCCCCccceecCCcHHHHHHHHHHHHcCCCeEEEEecCccccCCcchhhhHhhHHH-------
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccceeeehhhHHHHHHHHHhCCccccccccceeccccccceEEEEEecCceee
Q 027366 163 SCFLCSSEMKFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL 222 (224)
Q Consensus 163 s~~~~~~~~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL~~v~lD~sg~~~~ 222 (224)
||+||||||+||+|||++++||||||++|+||+|||-.+
T Consensus 74 ---------------------al~~aLgdk~GI~RyG~a~~PMDEal~~v~vDlsGRp~l 112 (190)
T cd07914 74 ---------------------ALKKALGDKKGIRRYGSALVPMDEALARVAVDLSGRPYL 112 (190)
T ss_pred ---------------------HHHHHhcCccccceeEccccccchhheEEEEECCCCCeE
Confidence 999999999999999999999999999999999999765
No 6
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=100.00 E-value=5.5e-50 Score=359.29 Aligned_cols=116 Identities=47% Similarity=0.728 Sum_probs=113.1
Q ss_pred CCCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccc
Q 027366 78 DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVT 157 (224)
Q Consensus 78 ~~~R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~ 157 (224)
+.+|+++++|+||||+|+|+|||||+|+++++||||||||||++||+||+|||+|+|+||++||+|||+||+||+|||
T Consensus 163 ~~~r~~~~~R~t~et~i~~~l~ldg~g~~~i~tgi~f~dhml~~~~~h~~~~l~v~~~gd~~vd~hh~~ed~~i~lG~-- 240 (354)
T PRK05446 163 KRDRYAHVVRNTKETDIDVEVWLDREGKSKINTGIGFFDHMLDQIATHGGFRLEIKVKGDLHIDDHHTVEDTALALGE-- 240 (354)
T ss_pred cCCceEEEEecccceEEEEEEEeCCCCceeeecCCcHHHHHHHHHHHHcCCCeEEEEecCccccCCchHHHHHHHHHH--
Confidence 457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccccccccceeeehhhHHHHHHHHHhCCccccccccceeccccccceEEEEEecCceee
Q 027366 158 IQNGVSCFLCSSEMKFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL 222 (224)
Q Consensus 158 ~q~~~s~~~~~~~~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL~~v~lD~sg~~~~ 222 (224)
||.||||||+||+|||+ ++||||||++|+||+|||-.+
T Consensus 241 --------------------------a~~~alg~~~gi~r~g~-~~pmdeal~~~~~d~sgr~~~ 278 (354)
T PRK05446 241 --------------------------ALKQALGDKRGIGRFGF-VLPMDECLARCALDISGRPYL 278 (354)
T ss_pred --------------------------HHHHHhcCccccceeee-ccchhheeeEEEEECCCCCee
Confidence 99999999999999999 999999999999999999765
No 7
>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-47 Score=327.88 Aligned_cols=135 Identities=57% Similarity=0.788 Sum_probs=128.3
Q ss_pred chhhcccccCCccCCCCCCCCCCCCCCcCCCCCCCCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHh
Q 027366 45 TRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLAS 124 (224)
Q Consensus 45 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI~FLDHML~qla~ 124 (224)
.+.|+++.+.+.++.++ .+..|.++.+|.|+||++++++|.||.++.+++|||||||||+++||+
T Consensus 6 alV~r~tnetkisiaia---------------ld~apl~ee~~~~~E~~~s~~anq~g~qVi~v~TGIgFLDHM~haLAk 70 (219)
T KOG3143|consen 6 ALVMRSTNETKISIAIA---------------LDNAPLGEEKRETKETNVSVKANQDGHQVIDVSTGIGFLDHMLHALAK 70 (219)
T ss_pred hHHhcccccccceEEEe---------------cCCCccchhhccccchhheeeecccCceeeecccCcchHHHHHHHHHh
Confidence 46788888888888884 466789999999999999999999999999999999999999999999
Q ss_pred hcCcceEEEEecCccccCCccceeeeecccccccccCccccccccccceeeehhhHHHHHHHHHhCCccccccccceecc
Q 027366 125 HGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEMKFCCIISTFVVQALLQALGDRKGINRFGDFTAP 204 (224)
Q Consensus 125 Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~P 204 (224)
||||+|+|+|+||+|||||||+||+||+||+ ||+||||.++|++|||+|++|
T Consensus 71 H~gwsl~v~~~GDlhIDDHHT~ED~aiAlG~----------------------------Afk~AlG~~~GvkRFG~~~aP 122 (219)
T KOG3143|consen 71 HGGWSLHVRATGDLHIDDHHTNEDVAIALGT----------------------------AFKKALGERKGVKRFGDFTAP 122 (219)
T ss_pred cCCceEEEEecCceeecccccchhHHHHHHH----------------------------HHHHHHhhhhchhhcccccCc
Confidence 9999999999999999999999999999999 999999999999999999999
Q ss_pred ccccceEEEEEecCceee
Q 027366 205 LDEALIHVSLVCLFHILL 222 (224)
Q Consensus 205 MDEAL~~v~lD~sg~~~~ 222 (224)
+||||+++++|+|||-.+
T Consensus 123 LDEALsr~vvDLSgRPYa 140 (219)
T KOG3143|consen 123 LDEALSRVVVDLSGRPYA 140 (219)
T ss_pred HHHHHhHheeccCCCeeE
Confidence 999999999999999754
No 8
>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants. In most organisms it is a monofunctional protein of about 22 to 29 kD. In some bacteria such as Escherichia coli, it is the C-terminal domain of a bifunctional protein that include a histidinol-phosphatase domain [].; GO: 0004424 imidazoleglycerol-phosphate dehydratase activity, 0000105 histidine biosynthetic process; PDB: 2F1D_G 2AE8_A 1RHY_B.
Probab=100.00 E-value=9e-43 Score=285.40 Aligned_cols=85 Identities=55% Similarity=0.881 Sum_probs=75.0
Q ss_pred cCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCccccccccccceeeehhhHHHHHHHHHh
Q 027366 110 TCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEMKFCCIISTFVVQALLQAL 189 (224)
Q Consensus 110 TgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~~~~~~~~~~~v~Al~qAL 189 (224)
||||||||||+||++||+||++|+|+||++||+|||+|||||+||| ||+|||
T Consensus 1 TGi~F~DHML~~la~h~~~dl~v~a~GDl~vD~HHtvEDvgI~LG~----------------------------al~~aL 52 (145)
T PF00475_consen 1 TGIGFFDHMLEQLAKHGGFDLSVKAKGDLEVDDHHTVEDVGIVLGQ----------------------------ALRQAL 52 (145)
T ss_dssp -S-HHHHHHHHHHHHHHT-EEEEEEEC-TTT-CHHHHHHHHHHHHH----------------------------HHHHHH
T ss_pred CCCchHHHHHHHHHHHCCCCEEEEEeCCCCcCcceehhhHHHHHHH----------------------------HHHHHh
Confidence 8999999999999999999999999999999999999999999999 999999
Q ss_pred CCccccccccceeccccccceEEEEEecCceee
Q 027366 190 GDRKGINRFGDFTAPLDEALIHVSLVCLFHILL 222 (224)
Q Consensus 190 GdrkGI~RfG~~~~PMDEAL~~v~lD~sg~~~~ 222 (224)
|||+||+|||++++||||||++|+||+|||-.+
T Consensus 53 gdk~GI~Ryg~a~~PMDEaL~~v~vDlsGRp~l 85 (145)
T PF00475_consen 53 GDKRGINRYGSASVPMDEALARVAVDLSGRPYL 85 (145)
T ss_dssp TT-TTB--EEEEEEEETTEEEEEEEEESSS-EE
T ss_pred ccccCceeeeccccchhhhhheeEEEecCCceE
Confidence 999999999999999999999999999999765
No 9
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.71 E-value=0.0019 Score=59.28 Aligned_cols=71 Identities=20% Similarity=0.296 Sum_probs=58.6
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEEEecCccccCCccceeee
Q 027366 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVG 150 (224)
Q Consensus 81 R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI----------~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvG 150 (224)
|-+. .=--.|+-+.|.+++-|.+-...+.+. ..+.|.+..|+.++++.|||+..|+ ++||.+|-+-
T Consensus 254 r~g~-~~pmdeal~~~~~d~sgr~~~~~~~~~~~~~~g~~~~e~~~~f~~~~~~~~~~tlh~~~~g~---n~hh~~ea~f 329 (354)
T PRK05446 254 RFGF-VLPMDECLARCALDISGRPYLVFKAEFKRERVGDMSTEMVEHFFRSLSDAMGCTLHLKTKGK---NDHHKVESLF 329 (354)
T ss_pred eeee-ccchhheeeEEEEECCCCCeeEEccCCCccccCCCCchHHHHHHHHHHhcCCCEEEEEeccC---ChHHHHHHHH
Confidence 5555 445689999999999988755444322 3588999999999999999999997 7899999999
Q ss_pred ecccc
Q 027366 151 LAIGT 155 (224)
Q Consensus 151 IaLG~ 155 (224)
-++|.
T Consensus 330 Ka~~~ 334 (354)
T PRK05446 330 KAFGR 334 (354)
T ss_pred HHHHH
Confidence 99999
No 10
>PLN02800 imidazoleglycerol-phosphate dehydratase
Probab=96.38 E-value=0.0053 Score=55.64 Aligned_cols=72 Identities=24% Similarity=0.438 Sum_probs=59.4
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEEE--ecCccccCCcccee
Q 027366 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVRA--TGDIHIDDHHTNED 148 (224)
Q Consensus 81 R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI----------~FLDHML~qla~Hg~fDl~v~A--~GDl~IDdHHtvED 148 (224)
|-+...---.|+-+.|.|++-|.+-...+-++ ..+.|++..|+.++++.|||+. .|+ ++||.+|-
T Consensus 153 RyG~a~vPMDEALa~vavDlSGRpylv~~~~~~~~~iG~~~telv~hFf~s~a~~a~~tLHi~~l~~G~---N~HH~~EA 229 (261)
T PLN02800 153 RFGDFSAPLDEALIEVVLDLSGRPYLGYNLEIPTERVGDLDTEMVEHFFQSLVNNSGMTVHIRQLAAGK---NSHHIIEA 229 (261)
T ss_pred eeEeeeecccceeEEEEEECCCCCceeecCCCCccccCCCchHHHHHHHHHHHhcCCCEEEEEecccCC---cHHHHHHH
Confidence 55666666789999999999988755444333 2478999999999999999986 696 68999999
Q ss_pred eeecccc
Q 027366 149 VGLAIGT 155 (224)
Q Consensus 149 vGIaLG~ 155 (224)
+--++|.
T Consensus 230 ~FKAfgr 236 (261)
T PLN02800 230 TAKAFGR 236 (261)
T ss_pred HHHHHHH
Confidence 9999999
No 11
>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional
Probab=96.32 E-value=0.0047 Score=53.79 Aligned_cols=72 Identities=21% Similarity=0.280 Sum_probs=56.2
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEE-EecCccccCCccceee
Q 027366 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNEDV 149 (224)
Q Consensus 81 R~~~v~R~TkET~I~V~lnlDGsG~~~isTg----------I~FLDHML~qla~Hg~fDl~v~-A~GDl~IDdHHtvEDv 149 (224)
|-+...=--.|+-+.+.+++-|.+-...+-+ ...+.|.+..||.++++.|||+ ..|+ ++||.+|-+
T Consensus 91 RyG~a~vPMDEaLa~~~vDlsGRpylv~~~~~~~~~iG~~~~elv~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~EA~ 167 (193)
T PRK13598 91 RFSHQIIPMDEALVLVSLDISGRGMAFVNLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGY---NTHHIIEAS 167 (193)
T ss_pred eeecceecchheeeEEEEEcCCCCeEEEccccCccccCCCchhhHHHHHHHHHhcCCCeEEEEEccCC---ChHHHHHHH
Confidence 3333333456899999999988765444322 2347899999999999999997 7786 799999999
Q ss_pred eecccc
Q 027366 150 GLAIGT 155 (224)
Q Consensus 150 GIaLG~ 155 (224)
--++|.
T Consensus 168 FKA~g~ 173 (193)
T PRK13598 168 FKGLGL 173 (193)
T ss_pred HHHHHH
Confidence 999999
No 12
>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase. Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and s
Probab=96.29 E-value=0.0052 Score=53.32 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=58.6
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEE-EecCccccCCccceee
Q 027366 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNEDV 149 (224)
Q Consensus 81 R~~~v~R~TkET~I~V~lnlDGsG~~~isTg----------I~FLDHML~qla~Hg~fDl~v~-A~GDl~IDdHHtvEDv 149 (224)
|-+...---.|+-+.|.|++-|.+-...+.. ...+.|.+..|+.++++.|||+ ..|+ ++||.+|-+
T Consensus 87 RyG~a~~PMDEal~~v~vDlsGRp~l~~~~~~~~~~iG~~~telv~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~Ea~ 163 (190)
T cd07914 87 RYGSALVPMDEALARVAVDLSGRPYLVFDAEFPREKIGDFDTELVEEFFRSFANNAGITLHIRVLYGR---NDHHIIEAI 163 (190)
T ss_pred eeEccccccchhheEEEEECCCCCeEEEecCcCcCccCCCChHHHHHHHHHHHhcCCCeEEEEEeecC---ChHHHHHHH
Confidence 5555555567899999999988875544432 3357899999999999999997 8897 789999999
Q ss_pred eecccc
Q 027366 150 GLAIGT 155 (224)
Q Consensus 150 GIaLG~ 155 (224)
--++|.
T Consensus 164 FKalgr 169 (190)
T cd07914 164 FKAFAR 169 (190)
T ss_pred HHHHHH
Confidence 999999
No 13
>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated
Probab=96.15 E-value=0.01 Score=51.73 Aligned_cols=73 Identities=18% Similarity=0.246 Sum_probs=60.4
Q ss_pred CceEEEEeeeCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEE-EecCccccCCcccee
Q 027366 80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNED 148 (224)
Q Consensus 80 ~R~~~v~R~TkET~I~V~lnlDGsG~~~isTg----------I~FLDHML~qla~Hg~fDl~v~-A~GDl~IDdHHtvED 148 (224)
.|-+...---.|+-+.|.|++-|.+-...+-+ ...+.|.+..|+.++++.|||+ ..|+ ++||.+|=
T Consensus 90 ~Ryg~a~~PMDEaL~~v~vDlSGRpyl~~~~~~~~~~iG~~~tel~~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~Ea 166 (195)
T PRK00951 90 RRYGHAYVPMDEALARVAVDLSGRPYLVFDVEFTREKIGTFDTELVREFFEAFANNAGITLHIRVLYGR---NAHHIIEA 166 (195)
T ss_pred ceeEeeeechhheeEEEEEECCCCCeEEEecCCCccccCCCchHHHHHHHHHHHhcCCCeEEEEecccC---ChHHHHHH
Confidence 36676666778999999999998875544332 2357899999999999999997 7886 78999999
Q ss_pred eeecccc
Q 027366 149 VGLAIGT 155 (224)
Q Consensus 149 vGIaLG~ 155 (224)
+--++|.
T Consensus 167 ~FKa~g~ 173 (195)
T PRK00951 167 LFKAFAR 173 (195)
T ss_pred HHHHHHH
Confidence 9999999
No 14
>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants. In most organisms it is a monofunctional protein of about 22 to 29 kD. In some bacteria such as Escherichia coli, it is the C-terminal domain of a bifunctional protein that include a histidinol-phosphatase domain [].; GO: 0004424 imidazoleglycerol-phosphate dehydratase activity, 0000105 histidine biosynthetic process; PDB: 2F1D_G 2AE8_A 1RHY_B.
Probab=95.58 E-value=0.032 Score=46.79 Aligned_cols=73 Identities=23% Similarity=0.380 Sum_probs=57.7
Q ss_pred CceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEEEe-cCccccCCcccee
Q 027366 80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVRAT-GDIHIDDHHTNED 148 (224)
Q Consensus 80 ~R~~~v~R~TkET~I~V~lnlDGsG~~~isTgI----------~FLDHML~qla~Hg~fDl~v~A~-GDl~IDdHHtvED 148 (224)
.|.+....--.|+-+.|.+++-|.+-...+-.. ..+.|.+..|+.++++.|+|+.. |+ ++||.+|=
T Consensus 59 ~Ryg~a~~PMDEaL~~v~vDlsGRp~l~~~~~~~~~~iG~~~~el~~~F~~sla~~~~~tlHi~~~~G~---N~HH~~Ea 135 (145)
T PF00475_consen 59 NRYGSASVPMDEALARVAVDLSGRPYLVFNGEFPREKIGDFDTELVEHFFRSLANNAGITLHIRVLYGE---NDHHIIEA 135 (145)
T ss_dssp --EEEEEEEETTEEEEEEEEESSS-EEEEE---SSSEETTEETTHHHHHHHHHHHHHTEEEEEEEEE-S---SHHHHHHH
T ss_pred eeeeccccchhhhhheeEEEecCCceEEEecccCccccCCCChhhHHHHHHHHHHhCCceEEEEEEeCC---ChHHHHHH
Confidence 477888888999999999999988765544433 34889999999999999999998 85 68999998
Q ss_pred eeecccc
Q 027366 149 VGLAIGT 155 (224)
Q Consensus 149 vGIaLG~ 155 (224)
+--++|+
T Consensus 136 ~FKa~gr 142 (145)
T PF00475_consen 136 IFKAFGR 142 (145)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888887
No 15
>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=94.15 E-value=0.053 Score=47.71 Aligned_cols=64 Identities=20% Similarity=0.309 Sum_probs=50.2
Q ss_pred eCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEEE-ecCccccCCccceeeeecccc
Q 027366 89 TKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNEDVGLAIGT 155 (224)
Q Consensus 89 TkET~I~V~lnlDGsG~~~isTg----------I~FLDHML~qla~Hg~fDl~v~A-~GDl~IDdHHtvEDvGIaLG~ 155 (224)
-.|+-+.+.+++.|..-...+-. ...+-|.+..||.|+++.|++++ .|+ ++||-+|-+-=++|.
T Consensus 100 MDEaL~~~~vDlSGRp~lv~~~~f~~~~vG~~~te~v~hFf~sla~~a~itlHi~~~~G~---N~HH~iEa~FKA~ar 174 (195)
T COG0131 100 MDEALARVAVDLSGRPYLVFNAEFTREKVGDFDTELVEHFFRSLANNAGITLHLSVLYGK---NDHHIIEALFKAFAR 174 (195)
T ss_pred chhhhheeEEecCCCeeEEEecccCccccCCcchhhHHHHHHHHHHhcCcEEEEEeccCC---ChHHHHHHHHHHHHH
Confidence 46788888888877644322211 23478999999999999999999 885 689999999999999
No 16
>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=73.61 E-value=2.6 Score=37.70 Aligned_cols=66 Identities=23% Similarity=0.323 Sum_probs=51.2
Q ss_pred eeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccc
Q 027366 88 VTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGT 155 (224)
Q Consensus 88 ~TkET~I~V~lnlDGsG~~~isTgI~----------FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~ 155 (224)
--.|.-+.+.++|.|.--+-++-|++ ..-|.|..|+.-+++-|+|+|--- -+|||.+|-.--++..
T Consensus 122 PLDEALsr~vvDLSgRPYav~~Lgl~rekVG~lscemipHfl~Sf~~asgiTLHv~cL~G--kNdHHr~EsaFKalAv 197 (219)
T KOG3143|consen 122 PLDEALSRVVVDLSGRPYAVYNLGLPREKVGTLSCEMIPHFLQSFVNASGITLHVRCLAG--KNDHHRIESAFKALAV 197 (219)
T ss_pred cHHHHHhHheeccCCCeeEEEecCCchhhcccchHhhHHHHHHHHHhhcCcEEEEEeecC--CCchhHHHHHHHHHHH
Confidence 34466677778888876666776664 578999999999999999998532 4689999987777776
No 17
>TIGR00321 dhys deoxyhypusine synthase. This family of apparent orthologs has an unusual UPGMA difference tree, in which the members from the archaea M. jannaschii and P. horikoshii cluster with the known eukaryotic deoxyhypusine synthases. Separated by a fairly deep branch, although still strongly related, is a small cluster of proteins from Methanobacterium thermoautotrophicum and Archeoglobus fulgidus, the latter of which has two.
Probab=42.31 E-value=15 Score=33.91 Aligned_cols=79 Identities=25% Similarity=0.426 Sum_probs=52.0
Q ss_pred EEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCcccccccccccee
Q 027366 95 SVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEMKFC 174 (224)
Q Consensus 95 ~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~~~~ 174 (224)
.|-+.+-|. -+++|.+ ..+..|.+|+.+|+-|.--|-+ .||+.=++|-. +.
T Consensus 47 ~ifLt~tg~---mvsaGlr---~ii~~Li~~g~Vd~ivtTganl-------~hD~~~~~g~~----------------~~ 97 (301)
T TIGR00321 47 TIFMGYAGN---LVPSGMR---EIIAYLIQHGMIDALVTTGANL-------EHDLIEALGPT----------------HL 97 (301)
T ss_pred eEEEEeccc---cchhhHH---HHHHHHHHcCCeeEEEeCCCch-------HHHHHHHcCcc----------------cc
Confidence 345555554 4788876 7899999999999999988876 34666666641 00
Q ss_pred eehhhHHHHHHHHHhCCccccccccceeccccccc
Q 027366 175 CIISTFVVQALLQALGDRKGINRFGDFTAPLDEAL 209 (224)
Q Consensus 175 ~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL 209 (224)
..|-+ =.+.| -++||||-|+.++|- |++
T Consensus 98 ---g~f~~--dd~~L-r~~ginRI~dv~ip~-e~y 125 (301)
T TIGR00321 98 ---GDFAV--DDKKL-REEGINRIGDVFVPN-ENF 125 (301)
T ss_pred ---cCCCC--ChHHH-HHcCCCccceecCCH-HHH
Confidence 01100 01222 268999999999995 554
No 18
>PRK02492 deoxyhypusine synthase-like protein; Provisional
Probab=39.61 E-value=16 Score=34.46 Aligned_cols=83 Identities=22% Similarity=0.141 Sum_probs=51.0
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCcccccccccc
Q 027366 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEM 171 (224)
Q Consensus 92 T~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~ 171 (224)
.+..+-+.+-|. -+++|++ ..+..|.+|+.+|+-|.--|-+. -||+.=++|.- ..+.+
T Consensus 57 ~~~~ifL~~tga---mvsaGlr---~~i~~Li~~~~VD~iVTTganl~------eeD~~k~~g~~--------~y~G~-- 114 (347)
T PRK02492 57 KECAVILTLAGS---LSSAGCM---QVYIDLVRNNMVDAIVATGANIV------DQDFFEALGFK--------HYQGS-- 114 (347)
T ss_pred CCCeEEEEeccc---hHHHHHH---HHHHHHHHcCCeeEEEECCCCch------HHHHHHHcCCC--------eecCC--
Confidence 344446666554 5788887 68999999999999998877541 23444455520 00000
Q ss_pred ceeeehhhHHHHHHHHHhCCccccccccceeccccc
Q 027366 172 KFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDE 207 (224)
Q Consensus 172 ~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDE 207 (224)
|. .==..|. ++||||-|+.++|-|+
T Consensus 115 -f~-----~dd~~Lr-----~~ginRIgdv~ip~e~ 139 (347)
T PRK02492 115 -PF-----VDDAVLR-----DLYIDRIYDTYIDEEE 139 (347)
T ss_pred -CC-----CCHHHHH-----HcCCCcccccccChHH
Confidence 00 0000333 5899999999999665
No 19
>PRK01221 putative deoxyhypusine synthase; Provisional
Probab=38.37 E-value=17 Score=33.74 Aligned_cols=80 Identities=23% Similarity=0.399 Sum_probs=52.3
Q ss_pred EEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCcccccccccccee
Q 027366 95 SVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEMKFC 174 (224)
Q Consensus 95 ~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~~~~ 174 (224)
.+-+.+-|. -++||. -..+..|.+|+.+|+-|.--|-+ .||+.=++|-..-+- +-++.
T Consensus 56 ~ifL~~tg~---mvs~Gl---r~ii~~Li~~~~VD~iVtTgani-------~hD~~~~lg~~~y~G-------~~~~d-- 113 (312)
T PRK01221 56 LRFLSFTAN---LVSTGL---RGLIADLIKRGLFNVVITTCGTL-------DHDIARSFGGVYYKG-------SFDID-- 113 (312)
T ss_pred eEEEEecch---hHHHHH---HHHHHHHHHcCCeeEEEeCCCch-------HHHHHHHcCCCeEec-------CCCCC--
Confidence 456666554 468885 58999999999999999988876 346665665410000 00000
Q ss_pred eehhhHHHHHHHHHhCCccccccccceecccccc
Q 027366 175 CIISTFVVQALLQALGDRKGINRFGDFTAPLDEA 208 (224)
Q Consensus 175 ~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEA 208 (224)
=..|. ++||||-|+.++|-|+-
T Consensus 114 -------d~~Lr-----~~GinRIgdv~ip~e~y 135 (312)
T PRK01221 114 -------DAMLK-----DLGIHRLGNVLIPVESY 135 (312)
T ss_pred -------hHHHH-----HcCCCcceeeccChHHH
Confidence 00233 68999999999997654
No 20
>PRK00805 putative deoxyhypusine synthase; Provisional
Probab=37.82 E-value=17 Score=34.01 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=53.3
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCcccccccccc
Q 027366 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEM 171 (224)
Q Consensus 92 T~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~ 171 (224)
.+-.|-+.+-|. -+++|.+ ..+..|.+|+.+|+-|.--|-+ .||+.=++|.-.-
T Consensus 45 ~~~~ifL~~tg~---mvsaGlr---~~i~~Li~~g~VD~iVTTgani-------~hD~~~~lg~~~y------------- 98 (329)
T PRK00805 45 PDNTIFMGLSGA---MVPAGMR---KIIKWLIRNRYVDVLVSTGANI-------FHDIHEALGFKHY------------- 98 (329)
T ss_pred CCCeEEEEeccc---hHHHHHH---HHHHHHHHcCCeeEEEeCCCch-------HHHHHHHcCCCee-------------
Confidence 334445555554 4788876 7999999999999999988866 3466666762000
Q ss_pred ceeeehhhHHHHHHHHHhCCccccccccceeccccccc
Q 027366 172 KFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDEAL 209 (224)
Q Consensus 172 ~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL 209 (224)
...|- +=...| -++||||-|+.++|- |++
T Consensus 99 -----~g~f~--~dd~~L-r~~ginRIgdv~ip~-e~y 127 (329)
T PRK00805 99 -----KGSHH--VDDEEL-FKEGIDRIYDVFAYE-EEF 127 (329)
T ss_pred -----ccCCC--CCHHHH-HHcCCCcccccccCH-HHH
Confidence 00010 001222 258999999999995 444
No 21
>PRK02301 putative deoxyhypusine synthase; Provisional
Probab=37.69 E-value=17 Score=33.93 Aligned_cols=83 Identities=23% Similarity=0.300 Sum_probs=53.4
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCcccccccccc
Q 027366 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEM 171 (224)
Q Consensus 92 T~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~ 171 (224)
.+..+-+.+-|. -+++|.+ ..+..|.+|+.+|+-|.--|-+ .||+.=++|...-+ -+.++
T Consensus 56 ~~~~ifL~~tg~---mvsaGlr---~ii~~Li~~~~VD~iVtTgani-------ehD~~~~lg~~~y~-------G~~~~ 115 (316)
T PRK02301 56 DDVTKFFGLAGA---MVPAGMR---GIVSDLIRDGHIDVLVTTGANL-------THDVIEAIGGHHHH-------GTAHA 115 (316)
T ss_pred CCCeEEEEcccc---hhHHHHH---HHHHHHHHcCCeeEEEcCCCch-------HHHHHHHcCCCeec-------cCCCC
Confidence 444456666554 4688876 7899999999999999988866 34666666620000 00000
Q ss_pred ceeeehhhHHHHHHHHHhCCccccccccceeccccccc
Q 027366 172 KFCCIISTFVVQALLQALGDRKGINRFGDFTAPLDEAL 209 (224)
Q Consensus 172 ~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMDEAL 209 (224)
==..|+ ++||||-|+.++|- |++
T Consensus 116 ---------dd~~Lr-----~~ginRIgd~~ip~-e~y 138 (316)
T PRK02301 116 ---------HDEELR-----DEGIDRIYDVYLPQ-EHF 138 (316)
T ss_pred ---------CHHHHH-----HcCCCccceeCCCh-HHH
Confidence 001233 58999999999995 544
No 22
>smart00113 CALCITONIN calcitonin. This family is formed by calcitonin, the calcitonin gene-related peptide, and amylin. They are short polypeptide hormones.
Probab=29.76 E-value=41 Score=23.02 Aligned_cols=28 Identities=39% Similarity=0.594 Sum_probs=21.8
Q ss_pred ceeeehhhHHHHHHHHHhCCccccccccceecccc
Q 027366 172 KFCCIISTFVVQALLQALGDRKGINRFGDFTAPLD 206 (224)
Q Consensus 172 ~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMD 206 (224)
|-||-.+|-|.+.|.+-| +|||. +.|++
T Consensus 1 Kr~cn~sTCvt~rla~~L------~r~~~-f~pT~ 28 (38)
T smart00113 1 KRCCNLSTCVLGRLADDL------NRSHT-YSPTN 28 (38)
T ss_pred CCccchhhHHHHHHHHHH------HHhcC-CCCCC
Confidence 569999999999988755 67776 55765
No 23
>PRK00132 rpsI 30S ribosomal protein S9; Reviewed
Probab=28.54 E-value=1.4e+02 Score=24.55 Aligned_cols=50 Identities=28% Similarity=0.389 Sum_probs=31.5
Q ss_pred EEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHH---------H---HHHHHhhcCcceEEEEec
Q 027366 83 GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDH---------M---LDQLASHGLFDVHVRATG 136 (224)
Q Consensus 83 ~~v~R~TkET~I~V~lnlDGsG~~~isTgI~FLDH---------M---L~qla~Hg~fDl~v~A~G 136 (224)
+.-+|+|.-..|. +. .|+|...|+ |.++.+. + |..+-..+.||+.++++|
T Consensus 8 ~~GrRK~a~A~v~--l~-~G~G~i~IN-g~~~~~yf~~~~~r~~i~~Pl~~~~~~~~~Di~i~V~G 69 (130)
T PRK00132 8 GTGRRKTAVARVR--LK-PGSGKITVN-GRDLEEYFPRETLRMVVRQPLELTETEGKFDVYVTVKG 69 (130)
T ss_pred EEeeCCCeEEEEE--EE-cCccEEEEC-CEeHHHHcCCHHHHHHHHHHHHHhCccCceeEEEEEEc
Confidence 4556666544444 43 899988775 5554332 1 223335689999999998
No 24
>PRK00770 deoxyhypusine synthase-like protein; Provisional
Probab=27.18 E-value=25 Score=33.53 Aligned_cols=82 Identities=22% Similarity=0.299 Sum_probs=52.1
Q ss_pred EEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCccccccccccc
Q 027366 93 NVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEMK 172 (224)
Q Consensus 93 ~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~~ 172 (224)
+..|-+.+-|. -+++|++- -.|..|.+|+.+|+-|.--|-+ .||+..++|--. .+.+
T Consensus 51 ~~tvfLtltga---misaGLr~--~ii~~LIr~g~VD~IVTTGAnl-------~hD~~~alg~~~--------y~G~--- 107 (384)
T PRK00770 51 GVTVGLTLSGA---MTPAGFGV--SALAPLIEAGFIDWIISTGANL-------YHDLHYALGLPL--------FAGH--- 107 (384)
T ss_pred CCcEEEEeccc---hhhhhcCh--HHHHHHHHcCCccEEEcCCccH-------HHHHHHHhCCCc--------ccCC---
Confidence 33445555553 57888740 2688999999999999888765 568888887210 0000
Q ss_pred eeeehhhHH-HHHHHHHhCCccccccccceecccccc
Q 027366 173 FCCIISTFV-VQALLQALGDRKGINRFGDFTAPLDEA 208 (224)
Q Consensus 173 ~~~~~~~~~-v~Al~qALGdrkGI~RfG~~~~PMDEA 208 (224)
| ++ =..|+ ++||||-|+.++|-|+.
T Consensus 108 ~------~~dd~~Lr-----~~GinRI~dv~ip~e~~ 133 (384)
T PRK00770 108 P------FVDDVKLR-----EEGIIRIYDIIFDYDVL 133 (384)
T ss_pred C------CCCHHHHH-----HcCCCcccccCcChHHH
Confidence 0 00 01222 57999999999997654
No 25
>PF13083 KH_4: KH domain; PDB: 3GKU_B.
Probab=27.11 E-value=54 Score=23.07 Aligned_cols=42 Identities=29% Similarity=0.373 Sum_probs=24.5
Q ss_pred cHHHHHHHHHhh-cCcceEEEEecC-ccccCCccceeeeecccc
Q 027366 114 FLDHMLDQLASH-GLFDVHVRATGD-IHIDDHHTNEDVGLAIGT 155 (224)
Q Consensus 114 FLDHML~qla~H-g~fDl~v~A~GD-l~IDdHHtvEDvGIaLG~ 155 (224)
|+..+|..+..+ +.+++.+....| ..+.-+=.-||.|+.||+
T Consensus 3 ~l~~~l~~l~~~~~~v~v~~~~~~~~~~i~v~i~~ed~g~lIGk 46 (73)
T PF13083_consen 3 FLEDFLKNLVDKPMDVEVTIEIEEDGDTIVVNIDGEDAGRLIGK 46 (73)
T ss_dssp --HHHHHHHHHHTT--EEEEEEETTTTEEEEEEESCCCHHHCTT
T ss_pred hHHHHHHHHhCCcCeEEEEEEEcCCceEEEEEECCCccceEECC
Confidence 567788888864 566666553332 222223356999999998
No 26
>COG1899 DYS1 Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones]
Probab=25.71 E-value=49 Score=31.38 Aligned_cols=82 Identities=30% Similarity=0.516 Sum_probs=55.5
Q ss_pred CeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCccccccccc
Q 027366 91 ETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSE 170 (224)
Q Consensus 91 ET~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~ 170 (224)
|-++.+-+.+-|+ -+++|. -+.+..|-+++.+|+-|.--|-+ .||+.=+||-. ..|.+.
T Consensus 52 ~~~~tvfl~~tg~---~vssGl---R~iia~LIr~~~idvvVTTgg~l-------~hDi~~~lg~~--------~~~G~~ 110 (318)
T COG1899 52 ESRVTVFLGLTGN---LVSSGL---REIIADLIRNGLIDVVVTTGGNL-------DHDIIKALGGP--------HYCGSF 110 (318)
T ss_pred hhcCEEEEecccc---ccchhH---HHHHHHHHHcCCeEEEEecCCch-------hHHHHHHcCCC--------eeccCc
Confidence 3335566666654 478886 78899999999999999999865 56777778831 111110
Q ss_pred cceeeehhhHHHHHHH-HHhCCccccccccceeccccc
Q 027366 171 MKFCCIISTFVVQALL-QALGDRKGINRFGDFTAPLDE 207 (224)
Q Consensus 171 ~~~~~~~~~~~v~Al~-qALGdrkGI~RfG~~~~PMDE 207 (224)
.+. ..| ..+||||-|+.++|-|+
T Consensus 111 -------------~~dD~~L-r~~gi~RIgnv~vp~e~ 134 (318)
T COG1899 111 -------------EVDDVEL-REEGINRIGNVFVPNEE 134 (318)
T ss_pred -------------CCCHHHH-HHhccccccceecChHH
Confidence 011 112 24799999999999765
No 27
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.92 E-value=81 Score=26.74 Aligned_cols=28 Identities=32% Similarity=0.433 Sum_probs=23.7
Q ss_pred CceeeeecCCccHHHHHHHHHhhcCcceEE
Q 027366 103 SGVADSSTCIPFLDHMLDQLASHGLFDVHV 132 (224)
Q Consensus 103 sG~~~isTgI~FLDHML~qla~Hg~fDl~v 132 (224)
.|+ -++-|||||-..-+.|++|| ||+..
T Consensus 14 ~gk-VvEVGiG~~~~VA~~L~e~g-~dv~a 41 (129)
T COG1255 14 RGK-VVEVGIGFFLDVAKRLAERG-FDVLA 41 (129)
T ss_pred CCc-EEEEccchHHHHHHHHHHcC-CcEEE
Confidence 443 47889999999999999999 98865
No 28
>PRK03971 putative deoxyhypusine synthase; Provisional
Probab=24.89 E-value=25 Score=33.00 Aligned_cols=79 Identities=23% Similarity=0.340 Sum_probs=51.6
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccceeeeecccccccccCcccccccc-c
Q 027366 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSS-E 170 (224)
Q Consensus 92 T~I~V~lnlDGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~-~ 170 (224)
.+-.+-|.+-|. -+++|.+ ..+..|.+|+.+|+-|.--|-++ ||+.=++|.- .+.+ .
T Consensus 65 ~~~~ifL~~tg~---misaGlr---~~i~~Li~~~~Vd~iVtTganle-------hDi~~~l~~~---------~~G~f~ 122 (334)
T PRK03971 65 EEATVFLGYTSN---IVSSGLR---EIIAYLVKEKKVDVIVTTAGGVE-------EDFIKCLKPF---------ILGEWD 122 (334)
T ss_pred CCCeEEEEcccc---ccchhHH---HHHHHHHHcCCeeEEEeCCCchH-------HHHHHHhccc---------ccCCCC
Confidence 344445655554 5788876 78999999999999999888763 4555555530 0000 0
Q ss_pred cceeeehhhHHHHHHHHHhCCccccccccceecccc
Q 027366 171 MKFCCIISTFVVQALLQALGDRKGINRFGDFTAPLD 206 (224)
Q Consensus 171 ~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PMD 206 (224)
+. =..|+ ++||||.|+.++|-|
T Consensus 123 ~d---------d~~Lr-----~~ginRIgnv~ip~e 144 (334)
T PRK03971 123 VD---------GAELR-----EKGINRIGNIFVPND 144 (334)
T ss_pred CC---------HHHHH-----HcCCCccceeeeChH
Confidence 00 01233 589999999999954
No 29
>cd04483 hOBFC1_like hOBFC1_like: A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be involved in all aspects of DNA metabolism including replication, recombination, and repair. RPA also mediates specific interactions of various nuclear proteins. In animals, plants, and fungi, RPA is a heterotrimer with subunits of 70KDa (RPA1), 32kDa (RPA2), and 14 KDa (RPA3). The OB fold domain of RPA2 has dual roles in ssDNA binding and trimerization.
Probab=23.48 E-value=1.2e+02 Score=22.89 Aligned_cols=22 Identities=41% Similarity=0.641 Sum_probs=17.3
Q ss_pred EEeeeCCeEEEEEEEeCCCceee
Q 027366 85 VKRVTKETNVSVKINVDGSGVAD 107 (224)
Q Consensus 85 v~R~TkET~I~V~lnlDGsG~~~ 107 (224)
+.++++++.+..+|+ ||+|..+
T Consensus 7 ~sv~~~~~~~~~tLd-DgTG~Ie 28 (92)
T cd04483 7 VSRRERETFYSFGVD-DGTGVVN 28 (92)
T ss_pred EEEEecCCeEEEEEe-cCCceEE
Confidence 456778899999998 8999643
No 30
>PF08502 LeuA_dimer: LeuA allosteric (dimerisation) domain; InterPro: IPR013709 This is the C-terminal regulatory (R) domain of alpha-isopropylmalate synthase, which catalyses the first committed step in the leucine biosynthetic pathway []. This domain, is an internally duplicated structure with a novel fold []. It comprises two similar units that are arranged such that the two -helices pack together in the centre, crossing at an angle of 34 degrees, sandwiched between the two three-stranded, antiparallel beta-sheets. The overall domain is thus constructed as a beta-alpha-beta three-layer sandwich []. ; GO: 0003852 2-isopropylmalate synthase activity, 0009098 leucine biosynthetic process; PDB: 3HQ1_A 3HPZ_B 1SR9_A 3FIG_B 3HPS_A 3F6G_A 3F6H_A.
Probab=22.13 E-value=3.9e+02 Score=20.85 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=39.3
Q ss_pred EEEeeeC-CeEEEEEEEe-CCCceeeeecCCccHHHHHHHHHhhcCcceEEEE
Q 027366 84 EVKRVTK-ETNVSVKINV-DGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRA 134 (224)
Q Consensus 84 ~v~R~Tk-ET~I~V~lnl-DGsG~~~isTgI~FLDHML~qla~Hg~fDl~v~A 134 (224)
++.+.+. .....|++.+ +|.-.....+|-|=+|=..+.|.++-+++++|.-
T Consensus 28 ~v~~~~~~~~~a~v~l~~~~g~~~~~~~~GnGpv~A~~~Al~~~~g~~i~l~d 80 (133)
T PF08502_consen 28 QVSSGSGGRPTATVTLEVTDGEEHTISGTGNGPVDAFFNALNKALGIDIELID 80 (133)
T ss_dssp EEEEETTCCEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHCHCCCEEEEEE
T ss_pred EEEECCCCCcEEEEEEEEcCCeEEEEEEECCChHHHHHHHHHHHcCCceEEEE
Confidence 3444444 4566666666 8877788999999999999999999999887653
No 31
>KOG2559 consensus Predicted pseudouridine synthase [Translation, ribosomal structure and biogenesis]
Probab=21.01 E-value=9.3 Score=35.91 Aligned_cols=60 Identities=23% Similarity=0.282 Sum_probs=38.3
Q ss_pred cCcceEEEEecCccccCCccceeeeecccccccccCccccccccccceeeehhhHHHHHHHHHhCCccccccccceeccc
Q 027366 126 GLFDVHVRATGDIHIDDHHTNEDVGLAIGTVTIQNGVSCFLCSSEMKFCCIISTFVVQALLQALGDRKGINRFGDFTAPL 205 (224)
Q Consensus 126 g~fDl~v~A~GDl~IDdHHtvEDvGIaLG~a~~q~~~s~~~~~~~~~~~~~~~~~~v~Al~qALGdrkGI~RfG~~~~PM 205 (224)
..|.+++.|.|...-.--..++|+|+.||+. |.--+---.|||.|. .
T Consensus 206 P~F~le~qc~~Etqe~Lr~LVh~igl~L~T~-------------------------------a~c~qlrr~r~g~F~--~ 252 (318)
T KOG2559|consen 206 PKFSLETQCSGETQEMLRQLVHHIGLNLGTE-------------------------------ATCIQLRRQRFGPFG--S 252 (318)
T ss_pred CccEEEEeeccccHHHHHHHHHHHhhcccce-------------------------------eeeeeeeeeccCCCC--c
Confidence 4566777777754333346788999999982 111122256788776 6
Q ss_pred cccceEEEEEecC
Q 027366 206 DEALIHVSLVCLF 218 (224)
Q Consensus 206 DEAL~~v~lD~sg 218 (224)
|.||.+-..|+-|
T Consensus 253 d~aLLr~qw~L~n 265 (318)
T KOG2559|consen 253 DNALLRKQWNLQN 265 (318)
T ss_pred cHHHHHHhhccHH
Confidence 8888776666543
Done!