Query 027370
Match_columns 224
No_of_seqs 164 out of 1230
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 08:57:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027370.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027370hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00326 Peptidase_S9: Prolyl 99.9 2.4E-22 5.3E-27 147.1 10.2 164 2-194 45-211 (213)
2 PRK10162 acetyl esterase; Prov 99.8 1.3E-18 2.7E-23 134.5 14.0 177 2-193 132-316 (318)
3 COG1506 DAP2 Dipeptidyl aminop 99.8 4.3E-19 9.3E-24 148.1 11.3 163 2-194 454-618 (620)
4 KOG1515 Arylacetamide deacetyl 99.8 3.3E-17 7.2E-22 125.3 14.3 179 2-192 143-335 (336)
5 KOG1455 Lysophospholipase [Lip 99.7 1.2E-17 2.6E-22 122.9 10.4 72 117-192 241-312 (313)
6 PF07859 Abhydrolase_3: alpha/ 99.7 1.9E-17 4.2E-22 121.0 10.7 149 2-168 49-210 (211)
7 PF02230 Abhydrolase_2: Phosph 99.7 5.1E-17 1.1E-21 119.1 11.6 117 18-192 99-215 (216)
8 COG0657 Aes Esterase/lipase [L 99.7 3.5E-16 7.7E-21 121.0 13.8 168 2-190 130-308 (312)
9 PRK11460 putative hydrolase; P 99.7 4.3E-16 9.3E-21 115.2 13.2 117 16-195 95-211 (232)
10 PRK10566 esterase; Provisional 99.7 7.8E-16 1.7E-20 115.4 12.4 152 3-192 89-248 (249)
11 PLN02298 hydrolase, alpha/beta 99.7 1.8E-15 3.9E-20 118.0 12.7 71 119-193 248-318 (330)
12 PHA02857 monoglyceride lipase; 99.7 2.5E-15 5.4E-20 114.3 13.2 70 118-193 205-274 (276)
13 TIGR02821 fghA_ester_D S-formy 99.7 5.3E-15 1.1E-19 112.3 14.1 140 19-192 133-274 (275)
14 COG0400 Predicted esterase [Ge 99.6 2.1E-15 4.5E-20 108.1 10.7 127 4-192 79-205 (207)
15 PRK13604 luxD acyl transferase 99.6 4.9E-15 1.1E-19 111.7 13.0 142 2-166 92-244 (307)
16 PF01738 DLH: Dienelactone hyd 99.6 1.9E-15 4.1E-20 111.0 10.6 137 3-193 80-218 (218)
17 PLN02385 hydrolase; alpha/beta 99.6 6.6E-15 1.4E-19 115.6 13.5 72 118-193 275-346 (349)
18 KOG1552 Predicted alpha/beta h 99.6 1.9E-15 4E-20 109.2 8.7 144 1-194 111-254 (258)
19 PRK10749 lysophospholipase L2; 99.6 2.3E-15 5E-20 117.3 8.6 72 118-192 255-329 (330)
20 PF08840 BAAT_C: BAAT / Acyl-C 99.6 8.9E-15 1.9E-19 106.6 11.1 176 2-194 3-212 (213)
21 PLN02442 S-formylglutathione h 99.6 2E-14 4.2E-19 109.5 12.0 139 21-192 140-280 (283)
22 COG1647 Esterase/lipase [Gener 99.6 8.6E-15 1.9E-19 103.1 7.0 162 2-191 69-243 (243)
23 PRK10115 protease 2; Provision 99.5 3.7E-14 7.9E-19 119.6 10.4 170 2-195 505-678 (686)
24 PLN02652 hydrolase; alpha/beta 99.5 2E-13 4.3E-18 108.3 12.8 70 118-194 320-389 (395)
25 COG2267 PldB Lysophospholipase 99.5 3.1E-13 6.6E-18 103.3 11.7 72 118-194 224-296 (298)
26 PRK05077 frsA fermentation/res 99.5 7.1E-13 1.5E-17 105.9 13.2 158 6-193 250-413 (414)
27 PLN02824 hydrolase, alpha/beta 99.5 4.7E-13 1E-17 102.7 11.1 65 118-192 230-294 (294)
28 TIGR03343 biphenyl_bphD 2-hydr 99.5 2.8E-13 6E-18 103.3 9.0 63 118-190 219-281 (282)
29 COG0412 Dienelactone hydrolase 99.5 1.7E-12 3.7E-17 95.9 12.2 137 2-193 93-234 (236)
30 PF12695 Abhydrolase_5: Alpha/ 99.5 1.2E-12 2.5E-17 89.9 10.5 101 4-166 45-145 (145)
31 TIGR03611 RutD pyrimidine util 99.5 1.1E-12 2.4E-17 98.2 11.2 63 118-190 194-256 (257)
32 PRK10673 acyl-CoA esterase; Pr 99.5 1.8E-12 3.9E-17 97.3 12.3 64 119-192 192-255 (255)
33 TIGR02240 PHA_depoly_arom poly 99.4 1.2E-12 2.7E-17 99.5 11.2 64 118-192 203-266 (276)
34 PLN02965 Probable pheophorbida 99.4 4.3E-12 9.4E-17 95.5 14.0 62 120-191 191-252 (255)
35 TIGR03056 bchO_mg_che_rel puta 99.4 3.2E-12 6.8E-17 97.1 13.2 62 119-190 217-278 (278)
36 PRK03592 haloalkane dehalogena 99.4 2.2E-12 4.7E-17 99.1 12.3 66 119-193 225-290 (295)
37 PF05448 AXE1: Acetyl xylan es 99.4 2.8E-13 6.1E-18 104.2 6.2 159 2-192 156-320 (320)
38 TIGR02427 protocat_pcaD 3-oxoa 99.4 8.2E-13 1.8E-17 98.3 8.2 62 119-190 190-251 (251)
39 PRK11071 esterase YqiA; Provis 99.4 1.2E-12 2.7E-17 93.8 8.1 54 122-190 136-189 (190)
40 KOG2100 Dipeptidyl aminopeptid 99.4 2.8E-12 6E-17 108.9 11.5 160 2-194 589-749 (755)
41 PLN02679 hydrolase, alpha/beta 99.4 6.4E-12 1.4E-16 99.1 12.8 69 118-192 288-357 (360)
42 KOG2112 Lysophospholipase [Lip 99.4 8.3E-12 1.8E-16 87.7 11.0 130 5-191 74-203 (206)
43 PRK00870 haloalkane dehalogena 99.4 4.7E-12 1E-16 97.6 10.9 67 118-192 235-301 (302)
44 TIGR01607 PST-A Plasmodium sub 99.4 1.1E-11 2.4E-16 96.6 12.9 63 122-191 270-332 (332)
45 PRK00175 metX homoserine O-ace 99.4 7.5E-12 1.6E-16 99.4 12.0 71 118-194 305-376 (379)
46 TIGR01738 bioH putative pimelo 99.4 4.9E-12 1.1E-16 93.8 10.4 62 118-189 184-245 (245)
47 KOG4667 Predicted esterase [Li 99.4 4.7E-12 1E-16 89.0 9.1 144 2-169 89-242 (269)
48 TIGR01836 PHA_synth_III_C poly 99.4 6.4E-12 1.4E-16 98.8 10.8 69 118-192 282-350 (350)
49 PRK08775 homoserine O-acetyltr 99.4 1.2E-11 2.7E-16 96.9 11.6 66 118-192 273-339 (343)
50 PRK07581 hypothetical protein; 99.3 1.7E-11 3.8E-16 96.0 12.1 66 118-193 271-337 (339)
51 PRK06765 homoserine O-acetyltr 99.3 2.3E-11 5.1E-16 96.2 12.0 68 118-191 319-387 (389)
52 TIGR01250 pro_imino_pep_2 prol 99.3 3.5E-11 7.7E-16 91.4 12.6 62 118-190 227-288 (288)
53 PRK05371 x-prolyl-dipeptidyl a 99.3 5.3E-11 1.2E-15 101.5 14.5 174 2-195 305-522 (767)
54 PRK06489 hypothetical protein; 99.3 1.4E-11 3E-16 97.2 10.1 65 118-193 288-358 (360)
55 PRK10349 carboxylesterase BioH 99.3 1.7E-11 3.6E-16 92.3 9.9 64 117-190 191-254 (256)
56 PRK03204 haloalkane dehalogena 99.3 2E-11 4.3E-16 93.4 10.4 58 122-189 227-285 (286)
57 PRK10985 putative hydrolase; P 99.3 8.2E-11 1.8E-15 91.6 14.1 169 2-191 114-319 (324)
58 PLN03087 BODYGUARD 1 domain co 99.3 2.8E-11 6.1E-16 97.7 11.5 63 120-191 416-478 (481)
59 TIGR03695 menH_SHCHC 2-succiny 99.3 3.5E-11 7.7E-16 89.3 11.4 61 119-190 191-251 (251)
60 KOG1454 Predicted hydrolase/ac 99.3 3.8E-11 8.3E-16 92.8 11.3 65 118-192 259-324 (326)
61 PRK11126 2-succinyl-6-hydroxy- 99.3 1.3E-10 2.8E-15 86.6 13.7 58 118-191 184-241 (242)
62 PRK14875 acetoin dehydrogenase 99.3 9.2E-12 2E-16 98.7 7.9 60 119-191 311-370 (371)
63 PLN02511 hydrolase 99.3 8.2E-11 1.8E-15 93.6 13.3 171 2-193 156-366 (388)
64 TIGR01392 homoserO_Ac_trn homo 99.3 4E-11 8.6E-16 94.4 10.9 67 118-190 284-351 (351)
65 TIGR01840 esterase_phb esteras 99.3 2.3E-11 5E-16 89.0 8.6 116 3-151 77-197 (212)
66 PLN02578 hydrolase 99.3 6.3E-11 1.4E-15 93.3 11.5 62 118-190 292-353 (354)
67 PLN02894 hydrolase, alpha/beta 99.3 1.5E-10 3.2E-15 92.5 13.7 68 118-195 321-388 (402)
68 KOG4391 Predicted alpha/beta h 99.3 8.3E-12 1.8E-16 87.9 5.5 151 3-195 131-285 (300)
69 COG2945 Predicted hydrolase of 99.3 5.2E-11 1.1E-15 82.4 9.1 121 2-190 85-205 (210)
70 KOG4627 Kynurenine formamidase 99.2 2E-11 4.4E-16 85.2 6.5 135 2-171 118-252 (270)
71 TIGR01249 pro_imino_pep_1 prol 99.2 1.8E-10 3.8E-15 89.0 12.2 57 122-191 248-304 (306)
72 PF12697 Abhydrolase_6: Alpha/ 99.2 1.1E-11 2.3E-16 90.8 4.0 46 120-169 174-219 (228)
73 TIGR03100 hydr1_PEP hydrolase, 99.2 7.4E-11 1.6E-15 89.7 8.3 163 3-190 83-273 (274)
74 KOG2281 Dipeptidyl aminopeptid 99.2 2.8E-10 6.1E-15 91.8 11.0 158 2-191 707-866 (867)
75 KOG2984 Predicted hydrolase [G 99.2 2.4E-11 5.1E-16 84.7 3.5 67 116-192 210-276 (277)
76 PF05728 UPF0227: Uncharacteri 99.1 1E-09 2.2E-14 78.0 10.5 143 6-189 43-186 (187)
77 PF06500 DUF1100: Alpha/beta h 99.1 1.1E-09 2.3E-14 85.8 11.5 159 5-193 245-410 (411)
78 PF00561 Abhydrolase_1: alpha/ 99.1 2.3E-10 4.9E-15 84.3 7.2 56 120-185 173-228 (230)
79 KOG4409 Predicted hydrolase/ac 99.1 3.6E-10 7.8E-15 85.5 8.0 62 121-191 302-363 (365)
80 COG3208 GrsT Predicted thioest 99.1 5.3E-09 1.2E-13 75.6 12.8 61 120-190 174-234 (244)
81 PLN03084 alpha/beta hydrolase 99.1 1.6E-09 3.5E-14 85.7 11.2 60 121-191 324-383 (383)
82 COG4099 Predicted peptidase [G 99.1 6.5E-10 1.4E-14 82.1 7.3 103 7-161 251-354 (387)
83 PLN02980 2-oxoglutarate decarb 99.0 1.3E-09 2.8E-14 100.2 10.1 70 117-193 1563-1640(1655)
84 PF06821 Ser_hydrolase: Serine 99.0 2.1E-09 4.6E-14 75.4 8.9 115 5-166 39-153 (171)
85 PF08538 DUF1749: Protein of u 99.0 7.9E-10 1.7E-14 83.0 7.0 178 2-190 87-303 (303)
86 KOG3043 Predicted hydrolase re 99.0 8.5E-10 1.9E-14 78.3 6.6 132 2-192 103-240 (242)
87 PLN00021 chlorophyllase 99.0 7E-09 1.5E-13 79.9 11.6 156 2-195 99-286 (313)
88 PLN02872 triacylglycerol lipas 99.0 7.8E-09 1.7E-13 82.1 11.6 71 117-193 318-390 (395)
89 PLN02211 methyl indole-3-aceta 99.0 1.5E-08 3.3E-13 77.0 12.7 59 122-191 211-269 (273)
90 COG3458 Acetyl esterase (deace 99.0 1.6E-09 3.5E-14 79.1 6.1 158 2-192 157-317 (321)
91 COG0429 Predicted hydrolase of 98.9 9.4E-09 2E-13 77.5 9.2 170 3-192 132-340 (345)
92 KOG4178 Soluble epoxide hydrol 98.9 4.2E-08 9.1E-13 74.0 12.5 67 117-192 253-320 (322)
93 KOG1838 Alpha/beta hydrolase [ 98.9 2.6E-08 5.6E-13 77.7 11.2 170 3-193 182-389 (409)
94 COG1505 Serine proteases of th 98.9 1.3E-09 2.8E-14 87.6 3.4 165 2-192 481-646 (648)
95 PRK07868 acyl-CoA synthetase; 98.9 2.3E-08 5.1E-13 88.7 11.3 71 117-194 292-363 (994)
96 PF03583 LIP: Secretory lipase 98.9 1.4E-08 3.1E-13 77.5 8.7 66 121-195 218-284 (290)
97 PRK10439 enterobactin/ferric e 98.8 1.8E-07 3.8E-12 74.9 13.7 123 7-169 272-394 (411)
98 KOG2382 Predicted alpha/beta h 98.8 6E-08 1.3E-12 73.2 10.1 63 120-192 251-313 (315)
99 PF03959 FSH1: Serine hydrolas 98.8 4.6E-08 1E-12 71.5 9.4 118 3-166 84-201 (212)
100 PF10503 Esterase_phd: Esteras 98.8 1.6E-08 3.5E-13 73.6 6.9 117 5-150 81-197 (220)
101 TIGR01838 PHA_synth_I poly(R)- 98.8 1.6E-07 3.4E-12 77.1 13.0 50 117-170 410-459 (532)
102 COG3545 Predicted esterase of 98.8 2.3E-07 5.1E-12 63.7 11.4 123 21-191 56-178 (181)
103 PRK05855 short chain dehydroge 98.7 5.4E-08 1.2E-12 81.7 9.0 62 121-193 232-293 (582)
104 PF09752 DUF2048: Uncharacteri 98.7 2.5E-07 5.3E-12 70.9 11.6 55 124-188 291-345 (348)
105 PF10340 DUF2424: Protein of u 98.7 3.7E-07 7.9E-12 71.0 11.9 149 3-167 179-350 (374)
106 PF06028 DUF915: Alpha/beta hy 98.7 7.1E-08 1.5E-12 71.8 7.5 157 5-190 89-253 (255)
107 PRK04940 hypothetical protein; 98.7 7.2E-07 1.6E-11 62.4 11.4 54 124-191 126-179 (180)
108 KOG2551 Phospholipase/carboxyh 98.6 8.7E-07 1.9E-11 63.2 11.2 116 26-193 106-221 (230)
109 COG1770 PtrB Protease II [Amin 98.6 5.8E-07 1.2E-11 73.6 9.8 142 2-166 508-656 (682)
110 KOG2237 Predicted serine prote 98.6 5.6E-07 1.2E-11 73.3 9.4 145 2-166 530-683 (712)
111 PF12740 Chlorophyllase2: Chlo 98.6 2.4E-06 5.3E-11 63.3 12.0 130 2-169 64-208 (259)
112 COG0627 Predicted esterase [Ge 98.5 4.2E-07 9.2E-12 69.8 7.5 146 25-193 153-312 (316)
113 COG3571 Predicted hydrolase of 98.5 3.9E-06 8.5E-11 56.9 9.9 96 21-166 86-181 (213)
114 TIGR01849 PHB_depoly_PhaZ poly 98.4 1.6E-06 3.5E-11 68.7 9.3 72 118-192 333-406 (406)
115 PF12715 Abhydrolase_7: Abhydr 98.4 1.5E-07 3.3E-12 72.8 3.4 50 3-69 208-257 (390)
116 PF00756 Esterase: Putative es 98.4 2.3E-07 4.9E-12 69.6 4.4 53 7-75 101-153 (251)
117 TIGR01839 PHA_synth_II poly(R) 98.4 6.3E-06 1.4E-10 67.5 12.4 49 117-169 436-484 (560)
118 PF10142 PhoPQ_related: PhoPQ- 98.4 1.8E-06 3.8E-11 67.5 8.7 167 1-193 148-321 (367)
119 TIGR03101 hydr2_PEP hydrolase, 98.4 9.7E-06 2.1E-10 61.1 12.1 143 2-163 83-243 (266)
120 PF00135 COesterase: Carboxyle 98.4 5E-07 1.1E-11 75.2 5.3 58 2-70 186-243 (535)
121 PF02129 Peptidase_S15: X-Pro 98.4 2.5E-06 5.5E-11 64.9 8.3 145 2-166 83-271 (272)
122 COG0596 MhpC Predicted hydrola 98.3 1.8E-05 3.8E-10 58.7 12.2 61 120-189 219-279 (282)
123 COG3243 PhaC Poly(3-hydroxyalk 98.3 7.7E-06 1.7E-10 64.0 10.0 72 117-192 325-399 (445)
124 TIGR00976 /NonD putative hydro 98.3 2.6E-05 5.7E-10 65.2 13.8 40 2-45 79-118 (550)
125 cd00312 Esterase_lipase Estera 98.2 7.3E-07 1.6E-11 73.6 3.2 43 2-44 154-196 (493)
126 PF10230 DUF2305: Uncharacteri 98.2 8.5E-06 1.8E-10 61.6 8.7 45 122-167 221-265 (266)
127 PF05705 DUF829: Eukaryotic pr 98.2 2E-05 4.3E-10 58.8 10.4 63 122-189 178-240 (240)
128 KOG3253 Predicted alpha/beta h 98.2 7E-06 1.5E-10 66.7 7.2 47 120-169 302-348 (784)
129 COG2021 MET2 Homoserine acetyl 98.2 6.1E-05 1.3E-09 58.2 11.9 65 118-191 302-367 (368)
130 COG2272 PnbA Carboxylesterase 98.1 2E-06 4.3E-11 68.6 3.7 43 2-44 158-200 (491)
131 COG2382 Fes Enterochelin ester 98.1 6.6E-05 1.4E-09 56.5 11.3 122 8-169 162-283 (299)
132 KOG3101 Esterase D [General fu 98.1 2.6E-06 5.6E-11 60.4 2.6 127 19-170 136-265 (283)
133 COG3150 Predicted esterase [Ge 98.1 1.5E-05 3.3E-10 54.4 5.9 41 4-46 41-81 (191)
134 COG3509 LpqC Poly(3-hydroxybut 98.1 7.3E-05 1.6E-09 56.0 10.0 43 4-46 124-166 (312)
135 COG2819 Predicted hydrolase of 98.0 0.00013 2.7E-09 54.2 10.0 40 18-70 131-170 (264)
136 PF08386 Abhydrolase_4: TAP-li 98.0 3.7E-05 7.9E-10 49.3 6.2 61 122-192 34-94 (103)
137 PF11144 DUF2920: Protein of u 97.9 0.00015 3.2E-09 57.1 9.9 39 123-161 294-332 (403)
138 PF06057 VirJ: Bacterial virul 97.9 0.00018 3.9E-09 50.8 9.3 138 3-191 52-191 (192)
139 COG4814 Uncharacterized protei 97.9 0.00023 4.9E-09 52.2 9.6 157 5-191 122-286 (288)
140 COG4188 Predicted dienelactone 97.8 2.7E-05 5.9E-10 60.2 4.3 42 3-44 134-179 (365)
141 PF05677 DUF818: Chlamydia CHL 97.8 0.00059 1.3E-08 52.4 10.8 43 1-45 194-236 (365)
142 PF07224 Chlorophyllase: Chlor 97.8 0.00057 1.2E-08 50.5 10.1 44 2-45 93-141 (307)
143 COG1073 Hydrolases of the alph 97.7 0.00012 2.5E-09 56.0 7.1 66 123-193 233-298 (299)
144 KOG2624 Triglyceride lipase-ch 97.7 0.00054 1.2E-08 54.5 10.5 75 114-192 324-398 (403)
145 COG4757 Predicted alpha/beta h 97.7 0.00014 3.1E-09 52.6 6.5 63 120-189 214-280 (281)
146 cd00707 Pancreat_lipase_like P 97.7 9.6E-05 2.1E-09 56.3 6.0 39 4-45 95-133 (275)
147 PF07819 PGAP1: PGAP1-like pro 97.7 0.00014 3.1E-09 53.6 6.4 60 5-74 66-125 (225)
148 KOG1516 Carboxylesterase and r 97.6 5.6E-05 1.2E-09 63.3 4.0 43 2-44 173-215 (545)
149 KOG1551 Uncharacterized conser 97.6 0.00012 2.6E-09 54.0 5.1 59 125-193 309-367 (371)
150 PF00975 Thioesterase: Thioest 97.6 0.00039 8.5E-09 51.3 8.1 60 123-189 169-229 (229)
151 PF02273 Acyl_transf_2: Acyl t 97.6 0.00065 1.4E-08 49.7 8.8 140 3-166 86-237 (294)
152 PF11339 DUF3141: Protein of u 97.6 0.00079 1.7E-08 54.5 10.0 72 116-190 291-369 (581)
153 PF03403 PAF-AH_p_II: Platelet 97.6 0.00037 8E-09 55.5 7.5 92 21-167 225-316 (379)
154 KOG2564 Predicted acetyltransf 97.5 0.00011 2.5E-09 54.6 3.8 35 153-193 294-328 (343)
155 TIGR03230 lipo_lipase lipoprot 97.5 0.00031 6.8E-09 56.6 6.5 39 4-45 102-140 (442)
156 KOG3975 Uncharacterized conser 97.5 0.0015 3.2E-08 47.9 8.9 60 121-189 241-300 (301)
157 PF11187 DUF2974: Protein of u 97.4 0.00036 7.7E-09 51.3 5.3 55 4-70 67-121 (224)
158 KOG4840 Predicted hydrolases o 97.4 0.003 6.6E-08 45.6 9.4 38 2-44 90-127 (299)
159 PF06342 DUF1057: Alpha/beta h 97.2 0.00076 1.6E-08 50.5 5.4 36 9-45 90-125 (297)
160 PF03096 Ndr: Ndr family; Int 97.2 0.0048 1.1E-07 46.6 9.4 61 121-191 218-278 (283)
161 PF01764 Lipase_3: Lipase (cla 97.2 0.00073 1.6E-08 45.8 4.6 38 8-47 50-87 (140)
162 COG4287 PqaA PhoPQ-activated p 97.1 0.00062 1.3E-08 52.6 3.8 144 1-166 213-370 (507)
163 PLN02733 phosphatidylcholine-s 97.1 0.001 2.2E-08 53.9 5.2 23 24-46 162-184 (440)
164 COG4947 Uncharacterized protei 97.1 0.00019 4.1E-09 49.4 0.7 115 24-167 101-216 (227)
165 cd00741 Lipase Lipase. Lipase 96.8 0.0022 4.7E-08 44.3 4.4 23 23-45 27-49 (153)
166 PF07519 Tannase: Tannase and 96.8 0.0046 1E-07 50.8 6.5 69 123-195 354-430 (474)
167 KOG4389 Acetylcholinesterase/B 96.7 0.0014 3E-08 52.7 3.1 37 4-40 198-234 (601)
168 PF11288 DUF3089: Protein of u 96.7 0.0037 8.1E-08 45.1 4.9 39 3-45 78-116 (207)
169 COG2936 Predicted acyl esteras 96.7 0.054 1.2E-06 45.1 11.7 55 2-73 106-160 (563)
170 KOG2931 Differentiation-relate 96.6 0.046 9.9E-07 41.4 10.0 62 121-192 245-306 (326)
171 KOG3724 Negative regulator of 96.5 0.0036 7.8E-08 53.2 4.4 40 5-44 159-202 (973)
172 PLN02408 phospholipase A1 96.5 0.004 8.6E-08 48.9 4.1 37 9-45 185-221 (365)
173 KOG3847 Phospholipase A2 (plat 96.5 0.0071 1.5E-07 46.0 5.2 121 20-195 237-374 (399)
174 PLN02454 triacylglycerol lipas 96.5 0.0046 9.9E-08 49.3 4.4 21 25-45 229-249 (414)
175 cd00519 Lipase_3 Lipase (class 96.3 0.0064 1.4E-07 45.0 4.3 22 24-45 128-149 (229)
176 PF00151 Lipase: Lipase; Inte 96.2 0.0055 1.2E-07 47.9 3.7 28 18-45 144-171 (331)
177 PLN02571 triacylglycerol lipas 96.2 0.0073 1.6E-07 48.2 4.2 21 25-45 227-247 (413)
178 PF02450 LCAT: Lecithin:choles 96.1 0.0087 1.9E-07 48.0 4.3 43 23-72 118-160 (389)
179 PF05057 DUF676: Putative seri 96.1 0.011 2.3E-07 43.5 4.4 38 7-44 61-98 (217)
180 PF12048 DUF3530: Protein of u 96.0 0.14 3E-06 39.9 10.4 128 5-192 180-309 (310)
181 PLN02802 triacylglycerol lipas 96.0 0.0098 2.1E-07 48.5 4.1 37 9-45 315-351 (509)
182 PLN02324 triacylglycerol lipas 95.9 0.011 2.3E-07 47.2 4.0 21 25-45 216-236 (415)
183 PF10605 3HBOH: 3HB-oligomer h 95.9 0.011 2.4E-07 48.9 4.1 73 122-194 555-639 (690)
184 COG4782 Uncharacterized protei 95.9 0.021 4.6E-07 44.5 5.3 65 4-78 176-240 (377)
185 PLN02719 triacylglycerol lipas 95.7 0.019 4.1E-07 46.9 4.7 22 24-45 298-319 (518)
186 PLN02761 lipase class 3 family 95.7 0.015 3.2E-07 47.6 4.1 22 24-45 294-315 (527)
187 PLN02753 triacylglycerol lipas 95.7 0.019 4.2E-07 47.0 4.7 38 8-45 293-333 (531)
188 PLN02310 triacylglycerol lipas 95.6 0.017 3.8E-07 46.0 4.1 21 24-44 209-229 (405)
189 KOG4388 Hormone-sensitive lipa 95.5 0.0072 1.6E-07 49.8 1.8 48 121-170 786-833 (880)
190 PLN00413 triacylglycerol lipas 95.5 0.023 5.1E-07 46.0 4.5 21 24-44 284-304 (479)
191 PF06850 PHB_depo_C: PHB de-po 95.5 0.026 5.7E-07 40.1 4.2 67 123-192 135-202 (202)
192 PF01674 Lipase_2: Lipase (cla 95.3 0.04 8.6E-07 40.4 4.8 21 25-45 76-96 (219)
193 PF05577 Peptidase_S28: Serine 95.2 0.051 1.1E-06 44.4 5.8 56 2-72 93-148 (434)
194 PLN03037 lipase class 3 family 95.2 0.029 6.2E-07 46.0 4.1 22 24-45 318-339 (525)
195 PLN02162 triacylglycerol lipas 95.0 0.039 8.5E-07 44.7 4.3 21 24-44 278-298 (475)
196 smart00824 PKS_TE Thioesterase 94.9 0.11 2.4E-06 37.3 6.3 23 24-46 64-86 (212)
197 PTZ00472 serine carboxypeptida 94.8 0.071 1.5E-06 43.9 5.5 65 122-192 364-459 (462)
198 PLN02934 triacylglycerol lipas 94.8 0.041 9E-07 45.0 4.0 21 24-44 321-341 (515)
199 PRK10252 entF enterobactin syn 94.8 0.21 4.5E-06 46.6 9.1 22 24-45 1133-1154(1296)
200 PF03283 PAE: Pectinacetyleste 94.6 0.12 2.6E-06 41.0 6.1 36 5-44 140-176 (361)
201 PF05990 DUF900: Alpha/beta hy 94.6 0.15 3.3E-06 37.9 6.3 49 23-75 92-140 (233)
202 PLN02847 triacylglycerol lipas 94.3 0.05 1.1E-06 45.4 3.6 21 25-45 252-272 (633)
203 KOG2183 Prolylcarboxypeptidase 94.3 0.06 1.3E-06 42.8 3.8 47 2-51 148-194 (492)
204 PF04301 DUF452: Protein of un 94.3 0.56 1.2E-05 34.2 8.5 34 126-166 169-202 (213)
205 KOG1553 Predicted alpha/beta h 94.3 0.11 2.3E-06 40.5 4.9 52 6-74 296-347 (517)
206 KOG4569 Predicted lipase [Lipi 93.9 0.092 2E-06 41.3 4.2 24 25-48 172-195 (336)
207 TIGR03502 lipase_Pla1_cef extr 93.4 0.12 2.6E-06 45.1 4.3 25 21-45 552-576 (792)
208 KOG4388 Hormone-sensitive lipa 93.2 0.17 3.7E-06 42.1 4.7 43 2-44 447-489 (880)
209 COG1075 LipA Predicted acetylt 92.7 0.25 5.4E-06 39.0 4.8 40 5-46 110-149 (336)
210 COG3319 Thioesterase domains o 92.6 0.12 2.7E-06 38.9 2.9 23 25-47 66-88 (257)
211 KOG2369 Lecithin:cholesterol a 92.6 0.16 3.4E-06 41.2 3.6 24 24-47 182-205 (473)
212 PLN02517 phosphatidylcholine-s 91.7 0.24 5.3E-06 41.6 3.9 21 24-44 213-233 (642)
213 PF01083 Cutinase: Cutinase; 91.3 0.44 9.5E-06 33.9 4.4 40 24-70 81-120 (179)
214 PF07082 DUF1350: Protein of u 91.2 4.3 9.3E-05 30.4 9.4 67 123-193 164-233 (250)
215 COG3946 VirJ Type IV secretory 91.1 0.73 1.6E-05 36.8 5.6 34 3-41 310-343 (456)
216 COG5153 CVT17 Putative lipase 90.9 0.28 6.1E-06 37.2 3.2 22 24-45 276-297 (425)
217 KOG4540 Putative lipase essent 90.9 0.28 6.1E-06 37.2 3.2 22 24-45 276-297 (425)
218 KOG2521 Uncharacterized conser 90.9 0.85 1.8E-05 36.0 5.9 67 123-194 226-292 (350)
219 PF08237 PE-PPE: PE-PPE domain 90.7 0.59 1.3E-05 34.5 4.7 26 22-47 46-71 (225)
220 PF00450 Peptidase_S10: Serine 89.4 1.3 2.7E-05 35.9 6.2 63 122-190 330-414 (415)
221 PF06500 DUF1100: Alpha/beta h 88.4 0.83 1.8E-05 36.8 4.2 66 122-192 189-255 (411)
222 TIGR03712 acc_sec_asp2 accesso 88.1 0.99 2.1E-05 37.0 4.5 37 9-45 342-378 (511)
223 PF06259 Abhydrolase_8: Alpha/ 87.2 1.4 3E-05 31.3 4.4 22 23-44 108-129 (177)
224 PLN02633 palmitoyl protein thi 86.3 2.1 4.5E-05 33.2 5.1 52 134-195 243-300 (314)
225 PTZ00472 serine carboxypeptida 86.0 1.8 3.8E-05 35.9 5.1 41 3-45 152-192 (462)
226 COG3673 Uncharacterized conser 85.4 1.5 3.3E-05 34.0 4.0 37 3-43 105-141 (423)
227 PLN02213 sinapoylglucose-malat 85.4 2.2 4.9E-05 33.4 5.2 64 122-192 233-317 (319)
228 PF02089 Palm_thioest: Palmito 84.9 1.7 3.7E-05 33.1 4.2 22 24-45 80-101 (279)
229 PLN02606 palmitoyl-protein thi 84.5 3.1 6.7E-05 32.2 5.4 23 24-46 95-117 (306)
230 PF05576 Peptidase_S37: PS-10 84.1 0.78 1.7E-05 36.8 2.1 63 122-191 351-413 (448)
231 PF09994 DUF2235: Uncharacteri 82.1 2.7 5.9E-05 32.2 4.3 36 4-43 76-111 (277)
232 PF12242 Eno-Rase_NADH_b: NAD( 81.3 5.7 0.00012 23.7 4.5 40 4-45 22-61 (78)
233 PLN02209 serine carboxypeptida 80.9 3.9 8.5E-05 33.6 5.1 63 122-191 351-434 (437)
234 PLN03016 sinapoylglucose-malat 80.7 4.4 9.5E-05 33.3 5.3 64 122-192 347-431 (433)
235 COG2939 Carboxypeptidase C (ca 80.4 1.7 3.8E-05 35.8 2.8 43 3-45 177-219 (498)
236 COG4553 DepA Poly-beta-hydroxy 79.8 2 4.2E-05 33.0 2.7 71 123-196 340-411 (415)
237 PF05277 DUF726: Protein of un 76.1 11 0.00024 29.9 6.1 41 24-72 220-260 (345)
238 KOG1282 Serine carboxypeptidas 76.0 6.7 0.00014 32.4 5.0 64 123-192 364-448 (454)
239 cd07224 Pat_like Patatin-like 75.7 5.4 0.00012 29.7 4.2 35 7-45 16-50 (233)
240 PF12146 Hydrolase_4: Putative 75.6 14 0.00031 22.2 5.3 62 123-189 17-78 (79)
241 PLN02209 serine carboxypeptida 74.8 6.5 0.00014 32.4 4.7 67 5-74 147-214 (437)
242 PLN02213 sinapoylglucose-malat 74.7 5.2 0.00011 31.4 4.0 49 22-73 49-97 (319)
243 KOG2182 Hydrolytic enzymes of 73.3 6.1 0.00013 32.7 4.1 42 2-46 152-194 (514)
244 PF00450 Peptidase_S10: Serine 70.4 5 0.00011 32.5 3.2 68 5-75 116-184 (415)
245 COG3007 Uncharacterized paraqu 65.0 16 0.00035 28.2 4.6 41 5-46 24-64 (398)
246 KOG2029 Uncharacterized conser 64.6 14 0.0003 31.5 4.5 23 23-45 525-547 (697)
247 cd07218 Pat_iPLA2 Calcium-inde 64.1 12 0.00026 28.2 3.8 34 7-44 17-50 (245)
248 PLN03016 sinapoylglucose-malat 63.8 7.9 0.00017 31.8 3.1 47 23-72 164-210 (433)
249 KOG3967 Uncharacterized conser 63.0 7.9 0.00017 28.4 2.6 26 21-46 187-212 (297)
250 cd07230 Pat_TGL4-5_like Triacy 61.9 14 0.0003 30.3 4.1 25 20-46 99-123 (421)
251 KOG2541 Palmitoyl protein thio 60.7 28 0.0006 26.7 5.1 22 23-44 91-112 (296)
252 cd07210 Pat_hypo_W_succinogene 59.8 18 0.00038 26.7 4.1 32 7-44 17-48 (221)
253 cd07207 Pat_ExoU_VipD_like Exo 57.9 10 0.00022 27.1 2.5 32 7-44 16-47 (194)
254 KOG4372 Predicted alpha/beta h 55.4 4.8 0.00011 32.3 0.5 17 24-40 150-166 (405)
255 PF14714 KH_dom-like: KH-domai 54.5 46 0.001 20.1 4.9 30 121-150 37-66 (80)
256 cd07212 Pat_PNPLA9 Patatin-lik 54.0 12 0.00026 29.3 2.4 18 26-43 34-51 (312)
257 PRK10279 hypothetical protein; 54.0 23 0.0005 27.6 4.0 31 8-44 23-53 (300)
258 KOG1282 Serine carboxypeptidas 53.3 30 0.00066 28.7 4.7 58 10-73 157-214 (454)
259 cd07228 Pat_NTE_like_bacteria 50.8 16 0.00035 25.7 2.6 32 8-45 18-49 (175)
260 PF01734 Patatin: Patatin-like 50.5 15 0.00033 25.6 2.5 20 25-44 28-47 (204)
261 cd07198 Patatin Patatin-like p 49.8 17 0.00038 25.4 2.6 33 7-45 15-47 (172)
262 cd07225 Pat_PNPLA6_PNPLA7 Pata 49.4 16 0.00035 28.5 2.5 31 8-44 33-63 (306)
263 cd07205 Pat_PNPLA6_PNPLA7_NTE1 49.1 18 0.00039 25.3 2.6 32 7-44 17-48 (175)
264 PF12122 DUF3582: Protein of u 48.1 62 0.0014 20.6 4.6 53 138-193 10-62 (101)
265 COG4566 TtrR Response regulato 48.1 41 0.00089 24.3 4.1 53 133-193 55-107 (202)
266 PF07519 Tannase: Tannase and 47.9 35 0.00076 28.6 4.4 46 18-76 109-154 (474)
267 cd07227 Pat_Fungal_NTE1 Fungal 47.8 18 0.0004 27.6 2.6 23 20-44 36-58 (269)
268 COG4822 CbiK Cobalamin biosynt 47.6 1.1E+02 0.0025 22.6 7.9 122 2-166 117-242 (265)
269 PF05116 S6PP: Sucrose-6F-phos 46.5 19 0.00041 27.1 2.4 25 6-33 167-191 (247)
270 cd07208 Pat_hypo_Ecoli_yjju_li 46.4 20 0.00043 27.2 2.6 34 7-45 15-48 (266)
271 smart00827 PKS_AT Acyl transfe 46.3 19 0.00042 27.6 2.6 24 18-43 78-101 (298)
272 TIGR02816 pfaB_fam PfaB family 45.8 28 0.0006 29.6 3.5 25 18-44 261-285 (538)
273 PRK05077 frsA fermentation/res 45.5 1.1E+02 0.0023 25.2 6.8 67 122-192 193-259 (414)
274 cd07209 Pat_hypo_Ecoli_Z1214_l 45.5 21 0.00046 26.1 2.6 32 8-45 16-47 (215)
275 PF10081 Abhydrolase_9: Alpha/ 45.2 1.2E+02 0.0025 23.6 6.3 18 24-41 109-126 (289)
276 cd07211 Pat_PNPLA8 Patatin-lik 45.0 18 0.00039 28.1 2.2 18 26-43 43-60 (308)
277 TIGR03131 malonate_mdcH malona 43.9 23 0.00051 27.2 2.7 24 18-43 72-95 (295)
278 cd07213 Pat17_PNPLA8_PNPLA9_li 43.5 22 0.00048 27.4 2.5 19 26-44 36-54 (288)
279 TIGR00128 fabD malonyl CoA-acy 43.4 22 0.00048 27.2 2.5 24 18-43 78-102 (290)
280 COG1647 Esterase/lipase [Gener 42.9 62 0.0013 24.1 4.4 41 123-166 16-56 (243)
281 cd07232 Pat_PLPL Patain-like p 42.2 22 0.00048 29.0 2.4 20 26-45 97-116 (407)
282 COG1752 RssA Predicted esteras 42.1 27 0.00059 27.2 2.8 23 20-44 37-59 (306)
283 cd07204 Pat_PNPLA_like Patatin 41.9 29 0.00063 26.0 2.8 20 26-45 33-52 (243)
284 PF00698 Acyl_transf_1: Acyl t 41.7 15 0.00033 28.7 1.3 54 124-192 157-210 (318)
285 cd01819 Patatin_and_cPLA2 Pata 41.1 28 0.00062 23.9 2.5 18 25-42 29-46 (155)
286 cd07217 Pat17_PNPLA8_PNPLA9_li 41.0 25 0.00054 28.0 2.5 18 26-43 43-60 (344)
287 PLN02752 [acyl-carrier protein 37.3 33 0.00072 27.2 2.6 18 26-43 126-143 (343)
288 cd07199 Pat17_PNPLA8_PNPLA9_li 37.1 27 0.00059 26.3 2.1 19 26-44 36-54 (258)
289 TIGR03100 hydr1_PEP hydrolase, 36.9 1.9E+02 0.004 22.0 7.4 42 123-166 27-69 (274)
290 cd07216 Pat17_PNPLA8_PNPLA9_li 36.6 25 0.00054 27.4 1.8 17 27-43 45-61 (309)
291 cd07222 Pat_PNPLA4 Patatin-lik 35.2 38 0.00081 25.5 2.5 35 7-43 16-50 (246)
292 cd07214 Pat17_isozyme_like Pat 34.6 31 0.00066 27.5 2.1 19 26-44 45-63 (349)
293 TIGR02690 resist_ArsH arsenica 33.2 82 0.0018 23.3 3.9 32 5-37 109-141 (219)
294 cd07206 Pat_TGL3-4-5_SDP1 Tria 32.5 42 0.00092 26.1 2.4 24 20-45 95-118 (298)
295 cd07220 Pat_PNPLA2 Patatin-lik 31.8 45 0.00098 25.2 2.5 37 7-45 21-57 (249)
296 cd03413 CbiK_C Anaerobic cobal 31.7 41 0.0009 21.4 1.9 34 123-158 62-98 (103)
297 PF05577 Peptidase_S28: Serine 31.1 78 0.0017 26.0 3.9 40 123-169 377-416 (434)
298 cd07215 Pat17_PNPLA8_PNPLA9_li 30.8 39 0.00084 26.7 2.1 17 27-43 43-59 (329)
299 cd07231 Pat_SDP1-like Sugar-De 30.8 50 0.0011 26.0 2.6 23 20-44 94-116 (323)
300 cd07229 Pat_TGL3_like Triacylg 30.7 46 0.001 27.1 2.5 24 20-45 109-132 (391)
301 COG0331 FabD (acyl-carrier-pro 30.3 42 0.0009 26.3 2.1 21 23-43 84-104 (310)
302 cd07221 Pat_PNPLA3 Patatin-lik 30.2 51 0.0011 24.9 2.5 19 26-44 34-52 (252)
303 PRK10673 acyl-CoA esterase; Pr 30.0 2.2E+02 0.0048 20.8 7.3 62 122-191 16-77 (255)
304 KOG2214 Predicted esterase of 29.9 26 0.00056 29.3 0.9 22 25-46 203-224 (543)
305 cd01785 PDZ_GEF_RA Ubiquitin-l 29.7 37 0.00081 20.4 1.3 17 206-222 59-75 (85)
306 TIGR03607 patatin-related prot 29.1 48 0.001 29.5 2.4 18 26-43 68-85 (739)
307 PF13242 Hydrolase_like: HAD-h 28.9 38 0.00081 19.8 1.3 22 18-39 16-38 (75)
308 COG4635 HemG Flavodoxin [Energ 28.1 1.3E+02 0.0029 21.1 3.9 68 124-194 2-75 (175)
309 COG3675 Predicted lipase [Lipi 28.0 28 0.00062 26.9 0.8 32 8-43 163-194 (332)
310 PF03575 Peptidase_S51: Peptid 27.5 29 0.00063 23.8 0.8 12 26-37 70-81 (154)
311 PRK01253 preprotein translocas 27.5 50 0.0011 18.3 1.5 34 7-40 15-48 (54)
312 cd01080 NAD_bind_m-THF_DH_Cycl 26.3 1.8E+02 0.004 20.4 4.6 37 6-44 29-66 (168)
313 COG4939 Major membrane immunog 26.2 2.1E+02 0.0045 19.2 4.5 46 136-192 91-136 (147)
314 cd00382 beta_CA Carbonic anhyd 26.1 1E+02 0.0022 20.2 3.1 30 4-38 44-73 (119)
315 TIGR03127 RuMP_HxlB 6-phospho 26.0 1.8E+02 0.0038 20.4 4.6 33 4-44 19-51 (179)
316 PF13684 Dak1_2: Dihydroxyacet 24.2 1.5E+02 0.0032 23.4 4.1 39 125-166 267-305 (313)
317 cd07219 Pat_PNPLA1 Patatin-lik 24.1 74 0.0016 25.8 2.5 19 26-44 46-64 (382)
318 cd00883 beta_CA_cladeA Carboni 23.8 1.2E+02 0.0026 21.6 3.3 32 5-41 67-98 (182)
319 PF08282 Hydrolase_3: haloacid 23.5 94 0.002 22.7 3.0 27 7-36 189-215 (254)
320 PLN02652 hydrolase; alpha/beta 23.3 3.2E+02 0.0069 22.3 6.1 65 122-191 136-200 (395)
321 PRK10834 vancomycin high tempe 23.3 1.4E+02 0.0031 22.5 3.7 43 123-166 82-124 (239)
322 TIGR01449 PGP_bact 2-phosphogl 23.2 71 0.0015 22.9 2.2 25 18-42 153-177 (213)
323 PF08357 SEFIR: SEFIR domain; 22.8 86 0.0019 21.2 2.4 39 123-162 1-40 (150)
324 PF06792 UPF0261: Uncharacteri 22.8 1.7E+02 0.0038 24.0 4.3 37 8-46 81-117 (403)
325 PRK14194 bifunctional 5,10-met 22.8 1.9E+02 0.004 22.7 4.4 36 7-44 145-182 (301)
326 TIGR01250 pro_imino_pep_2 prol 22.7 3.2E+02 0.0068 20.1 6.9 67 123-191 26-92 (288)
327 COG1737 RpiR Transcriptional r 21.5 2.2E+02 0.0047 21.9 4.6 23 23-45 130-152 (281)
328 PF12531 DUF3731: DNA-K relate 21.4 86 0.0019 23.7 2.3 63 127-193 148-214 (249)
329 PHA01735 hypothetical protein 21.2 83 0.0018 18.3 1.7 13 3-15 33-45 (76)
330 TIGR01454 AHBA_synth_RP 3-amin 21.2 93 0.002 22.3 2.5 24 18-41 143-166 (205)
331 COG2830 Uncharacterized protei 20.9 66 0.0014 22.6 1.4 21 24-44 57-77 (214)
332 PRK15219 carbonic anhydrase; P 20.9 1.5E+02 0.0032 22.5 3.4 33 4-41 128-160 (245)
333 PLN02382 probable sucrose-phos 20.8 98 0.0021 25.4 2.7 29 6-34 177-205 (413)
334 COG0466 Lon ATP-dependent Lon 20.8 2.3E+02 0.0051 25.3 4.9 42 3-44 638-693 (782)
335 PLN03006 carbonate dehydratase 20.3 1.3E+02 0.0029 23.5 3.1 32 5-41 158-189 (301)
336 PRK10976 putative hydrolase; P 20.1 73 0.0016 24.0 1.8 32 7-41 193-224 (266)
337 PRK02399 hypothetical protein; 20.1 2.2E+02 0.0048 23.4 4.4 22 25-46 98-119 (406)
No 1
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.88 E-value=2.4e-22 Score=147.10 Aligned_cols=164 Identities=24% Similarity=0.407 Sum_probs=115.2
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|+.++++|+.++. .+|++||+|+|+|+||++++.++.+. +..+++.+..+|.++........
T Consensus 45 ~~D~~~~i~~l~~~~---~iD~~ri~i~G~S~GG~~a~~~~~~~-------------~~~f~a~v~~~g~~d~~~~~~~~ 108 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQY---YIDPDRIGIMGHSYGGYLALLAATQH-------------PDRFKAAVAGAGVSDLFSYYGTT 108 (213)
T ss_dssp HHHHHHHHHHHHHTT---SEEEEEEEEEEETHHHHHHHHHHHHT-------------CCGSSEEEEESE-SSTTCSBHHT
T ss_pred hhhHHHHHHHHhccc---cccceeEEEEcccccccccchhhccc-------------ceeeeeeeccceecchhcccccc
Confidence 578899999998764 48899999999999999999999864 56788899888887766554332
Q ss_pred hhcchhHH-HHHhhccCCCCCCCCCccccccCCCccccCC--CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEE
Q 027370 82 HNRGLYRS-IFLSIMEGEESLPVFSPAVRIKDPSIRDASS--LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELV 158 (224)
Q Consensus 82 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~ 158 (224)
.. +.. ..... ..... .+......++...... ..+|+||+||++|..||+.++..+++++++.|.+++++
T Consensus 109 ~~---~~~~~~~~~-~~~~~----~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~ 180 (213)
T PF00326_consen 109 DI---YTKAEYLEY-GDPWD----NPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELL 180 (213)
T ss_dssp CC---HHHGHHHHH-SSTTT----SHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEE
T ss_pred cc---ccccccccc-Cccch----hhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEE
Confidence 11 111 11111 00000 1111111111122222 56899999999999999999999999999999999999
Q ss_pred EcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 159 LYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 159 ~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
++|+++|.+.... ...+..+.+.+|++++++
T Consensus 181 ~~p~~gH~~~~~~-----~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 181 IFPGEGHGFGNPE-----NRRDWYERILDFFDKYLK 211 (213)
T ss_dssp EETT-SSSTTSHH-----HHHHHHHHHHHHHHHHTT
T ss_pred EcCcCCCCCCCch-----hHHHHHHHHHHHHHHHcC
Confidence 9999999733221 245889999999999865
No 2
>PRK10162 acetyl esterase; Provisional
Probab=99.80 E-value=1.3e-18 Score=134.55 Aligned_cols=177 Identities=21% Similarity=0.208 Sum_probs=117.1
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhH-
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDH- 80 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~- 80 (224)
++|+.++++|+.++.+++++++++|+|+|+|+||++++.++........ ....+.+.+.+++.++.......
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~-------~~~~~~~~vl~~p~~~~~~~~s~~ 204 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQI-------DCGKVAGVLLWYGLYGLRDSVSRR 204 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCC-------CccChhheEEECCccCCCCChhHH
Confidence 5799999999999988899999999999999999999999876433211 02456777777776654321110
Q ss_pred -hhhc--ch----hHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCC
Q 027370 81 -CHNR--GL----YRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGA 153 (224)
Q Consensus 81 -~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~ 153 (224)
.... .+ ...+...+..+.. ...+|..... ..++....+|++|++|+.|.+ .++++.|++++++.|.
T Consensus 205 ~~~~~~~~l~~~~~~~~~~~y~~~~~--~~~~p~~~p~---~~~l~~~lPp~~i~~g~~D~L--~de~~~~~~~L~~aGv 277 (318)
T PRK10162 205 LLGGVWDGLTQQDLQMYEEAYLSNDA--DRESPYYCLF---NNDLTRDVPPCFIAGAEFDPL--LDDSRLLYQTLAAHQQ 277 (318)
T ss_pred HhCCCccccCHHHHHHHHHHhCCCcc--ccCCcccCcc---hhhhhcCCCCeEEEecCCCcC--cChHHHHHHHHHHcCC
Confidence 0000 00 0001111111110 0111111110 011224568999999999987 6799999999999999
Q ss_pred ccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 154 KPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 154 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
++++++++|..|.|..+... .+...+.++.+.+|+++..
T Consensus 278 ~v~~~~~~g~~H~f~~~~~~-~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 278 PCEFKLYPGTLHAFLHYSRM-MDTADDALRDGAQFFTAQL 316 (318)
T ss_pred CEEEEEECCCceehhhccCc-hHHHHHHHHHHHHHHHHHh
Confidence 99999999999997654322 2346788999999998764
No 3
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.80 E-value=4.3e-19 Score=148.10 Aligned_cols=163 Identities=20% Similarity=0.287 Sum_probs=117.8
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|+.++++|+.+... +|++|++|+|+|.||+++++++.+. +.+++.+...+..+........
T Consensus 454 ~~D~~~~~~~l~~~~~---~d~~ri~i~G~SyGGymtl~~~~~~--------------~~f~a~~~~~~~~~~~~~~~~~ 516 (620)
T COG1506 454 LEDLIAAVDALVKLPL---VDPERIGITGGSYGGYMTLLAATKT--------------PRFKAAVAVAGGVDWLLYFGES 516 (620)
T ss_pred HHHHHHHHHHHHhCCC---cChHHeEEeccChHHHHHHHHHhcC--------------chhheEEeccCcchhhhhcccc
Confidence 5789999998876543 8889999999999999999998884 4566666666544433322221
Q ss_pred hhc-ch-hHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEE
Q 027370 82 HNR-GL-YRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVL 159 (224)
Q Consensus 82 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~ 159 (224)
... .. ++... .+... ........++..+...+++|+||+||++|..||.+|+++|+++|+..|.++++++
T Consensus 517 ~~~~~~~~~~~~----~~~~~----~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~ 588 (620)
T COG1506 517 TEGLRFDPEENG----GGPPE----DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVV 588 (620)
T ss_pred chhhcCCHHHhC----CCccc----ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEE
Confidence 110 00 11100 01000 3334445555667777889999999999999999999999999999999999999
Q ss_pred cCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 160 YPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 160 ~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
||+++|.+.- .....++++.+.+|+.+++.
T Consensus 589 ~p~e~H~~~~-----~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 589 FPDEGHGFSR-----PENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred eCCCCcCCCC-----chhHHHHHHHHHHHHHHHhc
Confidence 9999999433 12366789999999998764
No 4
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.76 E-value=3.3e-17 Score=125.28 Aligned_cols=179 Identities=21% Similarity=0.297 Sum_probs=122.8
Q ss_pred cchHHHHHHHHHhc-ccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhH
Q 027370 2 VKDVSQGISFVFNN-IADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDH 80 (224)
Q Consensus 2 ~~D~~~al~~l~~~-~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (224)
.+|...|+.|+.++ ..+++.|++||+|+|.|+||++|..++.+..... .....+++.+.+.+.+........
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~-------~~~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK-------LSKPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc-------CCCcceEEEEEEecccCCCCCCCH
Confidence 57999999999998 6788999999999999999999999998865332 114678899988876654433222
Q ss_pred hhh-----cc-----hhHHHHHhhccC---CCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHH
Q 027370 81 CHN-----RG-----LYRSIFLSIMEG---EESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADA 147 (224)
Q Consensus 81 ~~~-----~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~ 147 (224)
..+ .. ....++...... ....+..++... ...........+|+|++.++.|.+ .+++..|+++
T Consensus 216 e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~--~~~~d~~~~~lp~tlv~~ag~D~L--~D~~~~Y~~~ 291 (336)
T KOG1515|consen 216 EKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGN--SLAKDLSGLGLPPTLVVVAGYDVL--RDEGLAYAEK 291 (336)
T ss_pred HHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCcccccccc--ccccCccccCCCceEEEEeCchhh--hhhhHHHHHH
Confidence 111 00 111111111111 122222333321 000011223457899999999955 8999999999
Q ss_pred HHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 148 LQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 148 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
|++.|.++++..++++.|++..+... .+...++++.+.+|+.+.
T Consensus 292 Lkk~Gv~v~~~~~e~~~H~~~~~~~~-~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 292 LKKAGVEVTLIHYEDGFHGFHILDPS-SKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHcCCeEEEEEECCCeeEEEecCCc-hhhHHHHHHHHHHHHhhc
Confidence 99999999999999999997665433 456889999999999864
No 5
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.75 E-value=1.2e-17 Score=122.87 Aligned_cols=72 Identities=22% Similarity=0.406 Sum_probs=61.1
Q ss_pred ccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 117 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
.+..+..|.+|+||++|.++.+..++++++... ..+++++.|||+.|. ++..+..+..+.++.+|.+||++|
T Consensus 241 ~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~--S~DKTlKlYpGm~H~--Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 241 NLNEVTVPFLILHGTDDKVTDPKVSKELYEKAS--SSDKTLKLYPGMWHS--LLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred hcccccccEEEEecCCCcccCcHHHHHHHHhcc--CCCCceeccccHHHH--hhcCCCchhHHHHHHHHHHHHHhc
Confidence 344577899999999999999999999999763 578999999999998 343455667899999999999986
No 6
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.74 E-value=1.9e-17 Score=121.02 Aligned_cols=149 Identities=27% Similarity=0.396 Sum_probs=103.9
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccc-hh----
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNL-LN---- 76 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~---- 76 (224)
++|+.++++|+.++..++++|+++|+|+|+|+||++++.++.+..... ...+++.+..++..++ ..
T Consensus 49 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~---------~~~~~~~~~~~p~~d~~~~~~~~ 119 (211)
T PF07859_consen 49 LEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG---------LPKPKGIILISPWTDLQDFDGPS 119 (211)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT---------TCHESEEEEESCHSSTSTSSCHH
T ss_pred ccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc---------ccchhhhhcccccccchhccccc
Confidence 689999999999998888999999999999999999999997754432 1347888888887766 11
Q ss_pred hh--hHhhhcch-----hHHHHHhhc-cCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHH
Q 027370 77 LV--DHCHNRGL-----YRSIFLSIM-EGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADAL 148 (224)
Q Consensus 77 ~~--~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l 148 (224)
.. ........ ......... .........+|... . ..+..||++|++|+.|.+ .+++..|++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~------~~~~~Pp~~i~~g~~D~l--~~~~~~~~~~L 190 (211)
T PF07859_consen 120 YDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDPLASPLNA-S------DLKGLPPTLIIHGEDDVL--VDDSLRFAEKL 190 (211)
T ss_dssp HHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTSTTTSGGGS-S------CCTTCHEEEEEEETTSTT--HHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-c------ccccCCCeeeeccccccc--hHHHHHHHHHH
Confidence 10 01111111 111111111 11122333444443 1 133468999999999966 67899999999
Q ss_pred HHcCCccEEEEcCCCCCchh
Q 027370 149 QKVGAKPELVLYPGKSHTDL 168 (224)
Q Consensus 149 ~~~~~~~~~~~~~~~~H~~~ 168 (224)
++.|.++++++++|+.|.|.
T Consensus 191 ~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 191 KKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHTT-EEEEEEETTEETTGG
T ss_pred HHCCCCEEEEEECCCeEEee
Confidence 99999999999999999853
No 7
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.73 E-value=5.1e-17 Score=119.09 Aligned_cols=117 Identities=26% Similarity=0.355 Sum_probs=85.8
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccC
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEG 97 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (224)
+.+++++||+++|+|+||.+++.++.+. +..+.+++.++|.........
T Consensus 99 ~~~i~~~ri~l~GFSQGa~~al~~~l~~-------------p~~~~gvv~lsG~~~~~~~~~------------------ 147 (216)
T PF02230_consen 99 AYGIDPSRIFLGGFSQGAAMALYLALRY-------------PEPLAGVVALSGYLPPESELE------------------ 147 (216)
T ss_dssp HTT--GGGEEEEEETHHHHHHHHHHHCT-------------SSTSSEEEEES---TTGCCCH------------------
T ss_pred HcCCChhheehhhhhhHHHHHHHHHHHc-------------CcCcCEEEEeecccccccccc------------------
Confidence 3468999999999999999999999986 467889999998543211100
Q ss_pred CCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCC
Q 027370 98 EESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGG 177 (224)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 177 (224)
..... ....|++++||+.|+++|.+.++..++.+++.+.+++++.|+|++|. .
T Consensus 148 ---------~~~~~--------~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~----------i 200 (216)
T PF02230_consen 148 ---------DRPEA--------LAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE----------I 200 (216)
T ss_dssp ---------CCHCC--------CCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------
T ss_pred ---------ccccc--------cCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC----------C
Confidence 00000 01369999999999999999999999999999999999999999999 2
Q ss_pred ccHHHHHHHHHHHhh
Q 027370 178 KDDLFDHIIAVIHAN 192 (224)
Q Consensus 178 ~~~~~~~i~~fl~~~ 192 (224)
..+.++++.+||+++
T Consensus 201 ~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 201 SPEELRDLREFLEKH 215 (216)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhh
Confidence 468999999999875
No 8
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.71 E-value=3.5e-16 Score=120.96 Aligned_cols=168 Identities=23% Similarity=0.284 Sum_probs=111.6
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh-hh--
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN-LV-- 78 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~-- 78 (224)
++|+.+++.|+.++..++++|+++|+|+|+|+||++++.++.....+. .......+.+++..+... ..
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~---------~~~p~~~~li~P~~d~~~~~~~~ 200 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG---------LPLPAAQVLISPLLDLTSSAASL 200 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC---------CCCceEEEEEecccCCcccccch
Confidence 679999999999999899999999999999999999999998765431 134455666666555443 00
Q ss_pred hHhhhcc-----hhHHHHHh-hccCCCCC--CCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHH
Q 027370 79 DHCHNRG-----LYRSIFLS-IMEGEESL--PVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQK 150 (224)
Q Consensus 79 ~~~~~~~-----~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~ 150 (224)
....... .....+.. +....... ...+|..... ... .+|++|++|+.|.+ .++++.|++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~------~~~-lPP~~i~~a~~D~l--~~~~~~~a~~L~~ 271 (312)
T COG0657 201 PGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDD------LSG-LPPTLIQTAEFDPL--RDEGEAYAERLRA 271 (312)
T ss_pred hhcCCccccCHHHHHHHHHHHhCcCccccCCCccCcccccc------ccC-CCCEEEEecCCCcc--hhHHHHHHHHHHH
Confidence 0000000 01111111 11111111 1233332221 222 68999999999988 5599999999999
Q ss_pred cCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 151 VGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 151 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
.|..++++.++|+.|.|..... +...+.+..+.+|+.
T Consensus 272 agv~~~~~~~~g~~H~f~~~~~---~~a~~~~~~~~~~l~ 308 (312)
T COG0657 272 AGVPVELRVYPGMIHGFDLLTG---PEARSALRQIAAFLR 308 (312)
T ss_pred cCCeEEEEEeCCcceeccccCc---HHHHHHHHHHHHHHH
Confidence 9999999999999998544332 235555777777776
No 9
>PRK11460 putative hydrolase; Provisional
Probab=99.70 E-value=4.3e-16 Score=115.21 Aligned_cols=117 Identities=21% Similarity=0.251 Sum_probs=89.7
Q ss_pred ccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhc
Q 027370 16 IADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIM 95 (224)
Q Consensus 16 ~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (224)
...+++++++|+++|+|+||.+++.++.+. +..+.+++.++|.+...
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-------------~~~~~~vv~~sg~~~~~-------------------- 141 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAE-------------PGLAGRVIAFSGRYASL-------------------- 141 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhC-------------CCcceEEEEeccccccc--------------------
Confidence 345578888999999999999999988764 23445566665522100
Q ss_pred cCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCC
Q 027370 96 EGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLR 175 (224)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 175 (224)
+.. ....+|++++||++|.+||.+.++++++.+++.+.++++++|++++|.+
T Consensus 142 ----------~~~----------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i-------- 193 (232)
T PRK11460 142 ----------PET----------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI-------- 193 (232)
T ss_pred ----------ccc----------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC--------
Confidence 000 0123799999999999999999999999999988899999999999992
Q ss_pred CCccHHHHHHHHHHHhhChh
Q 027370 176 GGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 176 ~~~~~~~~~i~~fl~~~~~~ 195 (224)
..+.++.+.+||.+....
T Consensus 194 --~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 194 --DPRLMQFALDRLRYTVPK 211 (232)
T ss_pred --CHHHHHHHHHHHHHHcch
Confidence 458888999999887643
No 10
>PRK10566 esterase; Provisional
Probab=99.68 E-value=7.8e-16 Score=115.35 Aligned_cols=152 Identities=18% Similarity=0.233 Sum_probs=91.3
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCH 82 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (224)
+|+..+++|+.+.. .+++++|+++|||+||.+++.++.+. +.+...+.+.+...+........
T Consensus 89 ~~~~~~~~~l~~~~---~~~~~~i~v~G~S~Gg~~al~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 151 (249)
T PRK10566 89 QEFPTLRAAIREEG---WLLDDRLAVGGASMGGMTALGIMARH--------------PWVKCVASLMGSGYFTSLARTLF 151 (249)
T ss_pred HHHHHHHHHHHhcC---CcCccceeEEeecccHHHHHHHHHhC--------------CCeeEEEEeeCcHHHHHHHHHhc
Confidence 45556677776532 36778999999999999999888764 23333333222111111110000
Q ss_pred hc-----chhHHHHHhhccCCCCCCCCCccccccCCCccccCCC-CCCEEEEeeCCCCccCchHHHHHHHHHHHcCC--c
Q 027370 83 NR-----GLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSL-LPPIILFHGTSDYSIPSDASMAFADALQKVGA--K 154 (224)
Q Consensus 83 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~--~ 154 (224)
.. ......+..... ....++ ........ .+|+|++||++|.+||.++++.+++.++..|. +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~ 220 (249)
T PRK10566 152 PPLIPETAAQQAEFNNIVA---PLAEWE--------VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKN 220 (249)
T ss_pred ccccccccccHHHHHHHHH---HHhhcC--------hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcc
Confidence 00 000000000000 000000 00112222 47999999999999999999999999988775 4
Q ss_pred cEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 155 PELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 155 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+++++++|++|.+ ..+.++++.+||+++
T Consensus 221 ~~~~~~~~~~H~~----------~~~~~~~~~~fl~~~ 248 (249)
T PRK10566 221 LTCLWEPGVRHRI----------TPEALDAGVAFFRQH 248 (249)
T ss_pred eEEEecCCCCCcc----------CHHHHHHHHHHHHhh
Confidence 7899999999982 236789999999875
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.66 E-value=1.8e-15 Score=118.01 Aligned_cols=71 Identities=21% Similarity=0.363 Sum_probs=55.8
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
....+|+||++|++|.++|.+.++.+++.+. ..++++++++|++|...+.. + ....+++.+.+.+||.++.
T Consensus 248 ~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~--~~~~~l~~~~~a~H~~~~e~-p-d~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 248 KDVSIPFIVLHGSADVVTDPDVSRALYEEAK--SEDKTIKIYDGMMHSLLFGE-P-DENIEIVRRDILSWLNERC 318 (330)
T ss_pred hhcCCCEEEEecCCCCCCCHHHHHHHHHHhc--cCCceEEEcCCcEeeeecCC-C-HHHHHHHHHHHHHHHHHhc
Confidence 3567899999999999999999999988774 24679999999999933221 1 1124678999999999974
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=99.66 E-value=2.5e-15 Score=114.33 Aligned_cols=70 Identities=17% Similarity=0.246 Sum_probs=56.7
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
+....+|+|+++|++|.++|++.+..+.+.+. .+++++++++++|.... +..+..+++.+++.+||+++.
T Consensus 205 l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~---~~~~~~~~~~~gH~~~~---e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 205 IPKIKTPILILQGTNNEISDVSGAYYFMQHAN---CNREIKIYEGAKHHLHK---ETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred cccCCCCEEEEecCCCCcCChHHHHHHHHHcc---CCceEEEeCCCcccccC---CchhHHHHHHHHHHHHHHHhc
Confidence 34567899999999999999999999988762 36899999999999332 222347789999999999863
No 13
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.65 E-value=5.3e-15 Score=112.34 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=96.1
Q ss_pred cCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCC
Q 027370 19 YGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGE 98 (224)
Q Consensus 19 ~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (224)
++++.++++++|+||||.+++.++.+. +..+++++..++.++.... . .....+.......
T Consensus 133 ~~~~~~~~~~~G~S~GG~~a~~~a~~~-------------p~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~l~~~ 192 (275)
T TIGR02821 133 FPLDGERQGITGHSMGGHGALVIALKN-------------PDRFKSVSAFAPIVAPSRC-P------WGQKAFSAYLGAD 192 (275)
T ss_pred CCCCCCceEEEEEChhHHHHHHHHHhC-------------cccceEEEEECCccCcccC-c------chHHHHHHHhccc
Confidence 467788999999999999999999886 4567778877776553211 0 0011111111111
Q ss_pred C-CCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCc-hHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCC
Q 027370 99 E-SLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS-DASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRG 176 (224)
Q Consensus 99 ~-~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~-~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 176 (224)
. .....++..... .....+|+++.+|+.|..++. .++..+.+.+++.+.++++.+++|++|.|.+
T Consensus 193 ~~~~~~~~~~~~~~------~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------- 259 (275)
T TIGR02821 193 EAAWRSYDASLLVA------DGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------- 259 (275)
T ss_pred ccchhhcchHHHHh------hcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh-------
Confidence 1 111112211111 112357999999999999998 6889999999999999999999999999665
Q ss_pred CccHHHHHHHHHHHhh
Q 027370 177 GKDDLFDHIIAVIHAN 192 (224)
Q Consensus 177 ~~~~~~~~i~~fl~~~ 192 (224)
....++..++|..++
T Consensus 260 -~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 260 -IASFIADHLRHHAER 274 (275)
T ss_pred -HHHhHHHHHHHHHhh
Confidence 348888888888765
No 14
>COG0400 Predicted esterase [General function prediction only]
Probab=99.65 E-value=2.1e-15 Score=108.12 Aligned_cols=127 Identities=25% Similarity=0.265 Sum_probs=101.9
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHN 83 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (224)
+.....+++.....+++++.++++++|+|.||++++.++.+. +..+++.+..+|.+......
T Consensus 79 ~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~-------------~~~~~~ail~~g~~~~~~~~----- 140 (207)
T COG0400 79 ETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL-------------PGLFAGAILFSGMLPLEPEL----- 140 (207)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC-------------chhhccchhcCCcCCCCCcc-----
Confidence 345556677777778899999999999999999999999986 45678888888744322110
Q ss_pred cchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCC
Q 027370 84 RGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGK 163 (224)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~ 163 (224)
.+ .....|+|++||+.|++||...+.++.+.+++.|.+++.++++ +
T Consensus 141 ---------------------~~------------~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~ 186 (207)
T COG0400 141 ---------------------LP------------DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-G 186 (207)
T ss_pred ---------------------cc------------ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-C
Confidence 00 0123799999999999999999999999999999999999999 9
Q ss_pred CCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 164 SHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 164 ~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
||. ...+.++.+.+|+.+.
T Consensus 187 GH~----------i~~e~~~~~~~wl~~~ 205 (207)
T COG0400 187 GHE----------IPPEELEAARSWLANT 205 (207)
T ss_pred CCc----------CCHHHHHHHHHHHHhc
Confidence 998 2568889999999864
No 15
>PRK13604 luxD acyl transferase; Provisional
Probab=99.64 E-value=4.9e-15 Score=111.73 Aligned_cols=142 Identities=18% Similarity=0.235 Sum_probs=88.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
.+|+..+++|+++. + .++|+|+||||||.+++.+|.. ..+++++..+|..++.......
T Consensus 92 ~~Dl~aaid~lk~~----~--~~~I~LiG~SmGgava~~~A~~---------------~~v~~lI~~sp~~~l~d~l~~~ 150 (307)
T PRK13604 92 KNSLLTVVDWLNTR----G--INNLGLIAASLSARIAYEVINE---------------IDLSFLITAVGVVNLRDTLERA 150 (307)
T ss_pred HHHHHHHHHHHHhc----C--CCceEEEEECHHHHHHHHHhcC---------------CCCCEEEEcCCcccHHHHHHHh
Confidence 36999999999874 1 3479999999999998666543 3478889888877766554431
Q ss_pred hhcchhHHHHHhhcc-----CCCC-CCCCCcc-----ccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHH
Q 027370 82 HNRGLYRSIFLSIME-----GEES-LPVFSPA-----VRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQK 150 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~-----~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~ 150 (224)
....+..-.+..... +... ...+... .....++.........|+|++||++|.+||.+.++++++.++
T Consensus 151 ~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~- 229 (307)
T PRK13604 151 LGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIR- 229 (307)
T ss_pred hhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhc-
Confidence 111000000000000 0000 0000000 000111122233445899999999999999999999999863
Q ss_pred cCCccEEEEcCCCCCc
Q 027370 151 VGAKPELVLYPGKSHT 166 (224)
Q Consensus 151 ~~~~~~~~~~~~~~H~ 166 (224)
..+++++.++|++|.
T Consensus 230 -s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 230 -SEQCKLYSLIGSSHD 244 (307)
T ss_pred -cCCcEEEEeCCCccc
Confidence 257899999999999
No 16
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.64 E-value=1.9e-15 Score=111.02 Aligned_cols=137 Identities=19% Similarity=0.340 Sum_probs=95.0
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCH 82 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (224)
+|+..+++|+.+... .+.++|+++|+|+||.+++.++.+. ..+++.+...|........
T Consensus 80 ~~~~aa~~~l~~~~~---~~~~kig~vGfc~GG~~a~~~a~~~--------------~~~~a~v~~yg~~~~~~~~---- 138 (218)
T PF01738_consen 80 ADLQAAVDYLRAQPE---VDPGKIGVVGFCWGGKLALLLAARD--------------PRVDAAVSFYGGSPPPPPL---- 138 (218)
T ss_dssp HHHHHHHHHHHCTTT---CEEEEEEEEEETHHHHHHHHHHCCT--------------TTSSEEEEES-SSSGGGHH----
T ss_pred HHHHHHHHHHHhccc---cCCCcEEEEEEecchHHhhhhhhhc--------------cccceEEEEcCCCCCCcch----
Confidence 567788999988653 5667999999999999999888762 4677888777611100000
Q ss_pred hcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCC
Q 027370 83 NRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPG 162 (224)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~ 162 (224)
.......+|+++++|++|+.++.+....+.+.+++.+.++++++|+|
T Consensus 139 ---------------------------------~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~g 185 (218)
T PF01738_consen 139 ---------------------------------EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPG 185 (218)
T ss_dssp ---------------------------------HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT
T ss_pred ---------------------------------hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCC
Confidence 00112347999999999999999999999999998899999999999
Q ss_pred CCCchhhhcCC--CCCCccHHHHHHHHHHHhhC
Q 027370 163 KSHTDLFLQDP--LRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 163 ~~H~~~~~~~~--~~~~~~~~~~~i~~fl~~~~ 193 (224)
++|.|..-..+ .....++..+.+.+||++++
T Consensus 186 a~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 186 AGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp --TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 99996554333 11235677888999998763
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.63 E-value=6.6e-15 Score=115.62 Aligned_cols=72 Identities=18% Similarity=0.309 Sum_probs=55.3
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
+....+|+||++|++|.++|.+.++.+++.+. ..+++++++++++|.. ....+ ....+++++.|.+||+++.
T Consensus 275 l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~--~~~~~l~~i~~~gH~l-~~e~p-~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 275 LEEVSLPLLILHGEADKVTDPSVSKFLYEKAS--SSDKKLKLYEDAYHSI-LEGEP-DEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred cccCCCCEEEEEeCCCCccChHHHHHHHHHcC--CCCceEEEeCCCeeec-ccCCC-hhhHHHHHHHHHHHHHHhc
Confidence 34567899999999999999999999988763 2467999999999983 22211 1113458999999999875
No 18
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.63 E-value=1.9e-15 Score=109.23 Aligned_cols=144 Identities=21% Similarity=0.243 Sum_probs=103.8
Q ss_pred CcchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhH
Q 027370 1 MVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDH 80 (224)
Q Consensus 1 ~~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (224)
+.+|++++.+||++. +| +.++|+|+|+|+|...++.+|.+. + +.+++..++..+....+..
T Consensus 111 ~y~Di~avye~Lr~~---~g-~~~~Iil~G~SiGt~~tv~Lasr~--------------~-~~alVL~SPf~S~~rv~~~ 171 (258)
T KOG1552|consen 111 LYADIKAVYEWLRNR---YG-SPERIILYGQSIGTVPTVDLASRY--------------P-LAAVVLHSPFTSGMRVAFP 171 (258)
T ss_pred chhhHHHHHHHHHhh---cC-CCceEEEEEecCCchhhhhHhhcC--------------C-cceEEEeccchhhhhhhcc
Confidence 357999999999985 34 568999999999999999888873 3 8889988875543333222
Q ss_pred hhhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEc
Q 027370 81 CHNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLY 160 (224)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 160 (224)
.....++... +.. ......+.+|+||+||++|++||..++++++++.+ .+++-.+.
T Consensus 172 ~~~~~~~~d~-------------f~~--------i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k---~~~epl~v 227 (258)
T KOG1552|consen 172 DTKTTYCFDA-------------FPN--------IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCK---EKVEPLWV 227 (258)
T ss_pred CcceEEeecc-------------ccc--------cCcceeccCCEEEEecccCceecccccHHHHHhcc---ccCCCcEE
Confidence 1110011000 000 23344566899999999999999999999999874 34688999
Q ss_pred CCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 161 PGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 161 ~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
.|+||..+.. ..+.++.+.+|+..-.+
T Consensus 228 ~g~gH~~~~~-------~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 228 KGAGHNDIEL-------YPEYIEHLRRFISSVLP 254 (258)
T ss_pred ecCCCccccc-------CHHHHHHHHHHHHHhcc
Confidence 9999995442 45899999999887544
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=99.61 E-value=2.3e-15 Score=117.28 Aligned_cols=72 Identities=15% Similarity=0.298 Sum_probs=57.0
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcC---CccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVG---AKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..+...|+|+++|++|.+|+.+.++.+++.++..+ .++++++++|++|...... + ...+++++.|.+||+++
T Consensus 255 ~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~-~--~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 255 AGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEK-D--AMRSVALNAIVDFFNRH 329 (330)
T ss_pred ccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCC-c--HHHHHHHHHHHHHHhhc
Confidence 34567899999999999999999999999887654 4568999999999833221 1 12578999999999875
No 20
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.61 E-value=8.9e-15 Score=106.57 Aligned_cols=176 Identities=17% Similarity=0.216 Sum_probs=91.5
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++-...|++||+++.. +++++|+|+|.|.||-+|+.++... +.+++++..+|..-...-....
T Consensus 3 LEyfe~Ai~~L~~~p~---v~~~~Igi~G~SkGaelALllAs~~--------------~~i~avVa~~ps~~~~~~~~~~ 65 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE---VDPDKIGIIGISKGAELALLLASRF--------------PQISAVVAISPSSVVFQGIGFY 65 (213)
T ss_dssp CHHHHHHHHHHHCSTT---B--SSEEEEEETHHHHHHHHHHHHS--------------SSEEEEEEES--SB--SSEEEE
T ss_pred hHHHHHHHHHHHhCCC---CCCCCEEEEEECHHHHHHHHHHhcC--------------CCccEEEEeCCceeEecchhcc
Confidence 3456889999999764 6778999999999999999999984 4677777766633222111111
Q ss_pred hhc--ch--hHHHHHhh-ccCCC---CCCCCC-ccccccCCCccccCCCCCCEEEEeeCCCCccCc-hHHHHHHHHHHHc
Q 027370 82 HNR--GL--YRSIFLSI-MEGEE---SLPVFS-PAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS-DASMAFADALQKV 151 (224)
Q Consensus 82 ~~~--~~--~~~~~~~~-~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~-~~~~~~~~~l~~~ 151 (224)
... .+ ........ ..... ...... ..........-.+.++.+|+|++.|++|.++|. ..++.+.++++++
T Consensus 66 ~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~ 145 (213)
T PF08840_consen 66 RDSSKPLPYLPFDISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAA 145 (213)
T ss_dssp TTE--EE----B-GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCT
T ss_pred cCCCccCCcCCcChhhceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHh
Confidence 100 00 00000000 00000 000000 000001111122335678999999999999987 5677788889887
Q ss_pred CCc--cEEEEcCCCCCchhhhcCCCCC----------------------CccHHHHHHHHHHHhhCh
Q 027370 152 GAK--PELVLYPGKSHTDLFLQDPLRG----------------------GKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 152 ~~~--~~~~~~~~~~H~~~~~~~~~~~----------------------~~~~~~~~i~~fl~~~~~ 194 (224)
+.+ .+.+.|+++||....-..|... ..++..+++++||++++.
T Consensus 146 ~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 146 GFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp T-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 754 8899999999994221111111 135678889999998764
No 21
>PLN02442 S-formylglutathione hydrolase
Probab=99.59 E-value=2e-14 Score=109.52 Aligned_cols=139 Identities=19% Similarity=0.259 Sum_probs=89.8
Q ss_pred CCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCC-C
Q 027370 21 GDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGE-E 99 (224)
Q Consensus 21 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 99 (224)
++.++++|+|+||||.+++.++.++ +..+++++..++.++..... . .... +....... .
T Consensus 140 ~~~~~~~i~G~S~GG~~a~~~a~~~-------------p~~~~~~~~~~~~~~~~~~~-~--~~~~----~~~~~g~~~~ 199 (283)
T PLN02442 140 LDTSRASIFGHSMGGHGALTIYLKN-------------PDKYKSVSAFAPIANPINCP-W--GQKA----FTNYLGSDKA 199 (283)
T ss_pred cCCCceEEEEEChhHHHHHHHHHhC-------------chhEEEEEEECCccCcccCc-h--hhHH----HHHHcCCChh
Confidence 5677999999999999999999886 45677777777766533110 0 0000 11111111 1
Q ss_pred CCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCch-HHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCc
Q 027370 100 SLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSD-ASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGK 178 (224)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 178 (224)
.+..+.+. ..........+|+++++|++|.+++.. +++.+++.+++.|.++++++++|.+|.+.. .
T Consensus 200 ~~~~~d~~-----~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~--------~ 266 (283)
T PLN02442 200 DWEEYDAT-----ELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFF--------I 266 (283)
T ss_pred hHHHcChh-----hhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHH--------H
Confidence 11111111 111222234689999999999999873 688999999999999999999999999543 2
Q ss_pred cHHHHHHHHHHHhh
Q 027370 179 DDLFDHIIAVIHAN 192 (224)
Q Consensus 179 ~~~~~~i~~fl~~~ 192 (224)
..++++...|..+.
T Consensus 267 ~~~i~~~~~~~~~~ 280 (283)
T PLN02442 267 ATFIDDHINHHAQA 280 (283)
T ss_pred HHHHHHHHHHHHHH
Confidence 35555555655544
No 22
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.57 E-value=8.6e-15 Score=103.08 Aligned_cols=162 Identities=15% Similarity=0.210 Sum_probs=101.0
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh-----
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN----- 76 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----- 76 (224)
++|+.+++++|.+.. . +.|.++|.||||.+++.++.+. .+++++..+.+.....
T Consensus 69 ~~~v~d~Y~~L~~~g----y--~eI~v~GlSmGGv~alkla~~~---------------p~K~iv~m~a~~~~k~~~~ii 127 (243)
T COG1647 69 WEDVEDGYRDLKEAG----Y--DEIAVVGLSMGGVFALKLAYHY---------------PPKKIVPMCAPVNVKSWRIII 127 (243)
T ss_pred HHHHHHHHHHHHHcC----C--CeEEEEeecchhHHHHHHHhhC---------------CccceeeecCCcccccchhhh
Confidence 357778888887543 2 3799999999999999999884 3566666665444322
Q ss_pred --hhhHhhhcchh----HHHHHhhccCCC--CCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHH
Q 027370 77 --LVDHCHNRGLY----RSIFLSIMEGEE--SLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADAL 148 (224)
Q Consensus 77 --~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l 148 (224)
++.+..+.+.+ ...+........ ..................+..+..|++|++|++|+.||.+.+..+++.+
T Consensus 128 e~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v 207 (243)
T COG1647 128 EGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHV 207 (243)
T ss_pred HHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhc
Confidence 22211111110 000000000000 0000001111111222445557789999999999999999999999987
Q ss_pred HHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 149 QKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 149 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
. ..+.++.+|++.||.. .. ..+++.+.+.|..||+.
T Consensus 208 ~--s~~KeL~~~e~SgHVI--t~---D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 208 E--SDDKELKWLEGSGHVI--TL---DKERDQVEEDVITFLEK 243 (243)
T ss_pred c--CCcceeEEEccCCcee--ec---chhHHHHHHHHHHHhhC
Confidence 4 3578999999999982 22 22589999999999973
No 23
>PRK10115 protease 2; Provisional
Probab=99.54 E-value=3.7e-14 Score=119.60 Aligned_cols=170 Identities=13% Similarity=0.061 Sum_probs=111.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|+.++++|+.++.. ++++|++++|.|+||.+++.++.+. ++.+++.+...|..|+..+....
T Consensus 505 ~~D~~a~~~~Lv~~g~---~d~~rl~i~G~S~GG~l~~~~~~~~-------------Pdlf~A~v~~vp~~D~~~~~~~~ 568 (686)
T PRK10115 505 FNDYLDACDALLKLGY---GSPSLCYGMGGSAGGMLMGVAINQR-------------PELFHGVIAQVPFVDVVTTMLDE 568 (686)
T ss_pred HHHHHHHHHHHHHcCC---CChHHeEEEEECHHHHHHHHHHhcC-------------hhheeEEEecCCchhHhhhcccC
Confidence 6799999999987643 7899999999999999999988765 57899999999988877553211
Q ss_pred hhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCC-EEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEc
Q 027370 82 HNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPP-IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLY 160 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 160 (224)
. .......+.. .+.. .... ........+++.++..+..| +||++|.+|..||+.++.+|+++|++.+.+++++++
T Consensus 569 ~-~p~~~~~~~e-~G~p-~~~~-~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~ 644 (686)
T PRK10115 569 S-IPLTTGEFEE-WGNP-QDPQ-YYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLL 644 (686)
T ss_pred C-CCCChhHHHH-hCCC-CCHH-HHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEE
Confidence 1 0111111100 0111 1000 00111223344444555556 778899999999999999999999999988888888
Q ss_pred ---CCCCCchhhhcCCCCCCccHHHHHHHHHHHhhChh
Q 027370 161 ---PGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 161 ---~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 195 (224)
+++||+..- .. ...-+.......|+.+....
T Consensus 645 ~~~~~~GHg~~~---~r-~~~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 645 CTDMDSGHGGKS---GR-FKSYEGVAMEYAFLIALAQG 678 (686)
T ss_pred EecCCCCCCCCc---CH-HHHHHHHHHHHHHHHHHhCC
Confidence 999998211 10 01122334457777776543
No 24
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.53 E-value=2e-13 Score=108.25 Aligned_cols=70 Identities=23% Similarity=0.320 Sum_probs=57.2
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
+.++.+|+|++||++|.++|++.++.+++++. +.++++++|+|++|.... ++..+++++.+.+||..+..
T Consensus 320 L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~--~~~k~l~~~~ga~H~l~~-----e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 320 FKSVTVPFMVLHGTADRVTDPLASQDLYNEAA--SRHKDIKLYDGFLHDLLF-----EPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred cccCCCCEEEEEeCCCCCCCHHHHHHHHHhcC--CCCceEEEECCCeEEecc-----CCCHHHHHHHHHHHHHHHhh
Confidence 34567899999999999999999999988763 345789999999999322 12478999999999998764
No 25
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.50 E-value=3.1e-13 Score=103.33 Aligned_cols=72 Identities=19% Similarity=0.336 Sum_probs=55.1
Q ss_pred cCCCCCCEEEEeeCCCCccC-chHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 118 ASSLLPPIILFHGTSDYSIP-SDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp-~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
......|+||++|++|.+|+ .+...++++++. ..++++++|+|+.|...... + ...+++++.+.+|+.++.+
T Consensus 224 ~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~--~~~~~~~~~~g~~He~~~E~-~--~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 224 APAIALPVLLLQGGDDRVVDNVEGLARFFERAG--SPDKELKVIPGAYHELLNEP-D--RAREEVLKDILAWLAEALP 296 (298)
T ss_pred cccccCCEEEEecCCCccccCcHHHHHHHHhcC--CCCceEEecCCcchhhhcCc-c--hHHHHHHHHHHHHHHhhcc
Confidence 34567899999999999999 688888887763 34589999999999932222 1 1128999999999998754
No 26
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.49 E-value=7.1e-13 Score=105.91 Aligned_cols=158 Identities=15% Similarity=0.045 Sum_probs=94.6
Q ss_pred HHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccc-hhhhhHhhhc
Q 027370 6 SQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNL-LNLVDHCHNR 84 (224)
Q Consensus 6 ~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 84 (224)
..+++|+.+.. .+|.++|+++|+|+||++++.++... +.++++++...+.+.. ..........
T Consensus 250 ~avld~l~~~~---~vd~~ri~l~G~S~GG~~Al~~A~~~-------------p~ri~a~V~~~~~~~~~~~~~~~~~~~ 313 (414)
T PRK05077 250 QAVLNALPNVP---WVDHTRVAAFGFRFGANVAVRLAYLE-------------PPRLKAVACLGPVVHTLLTDPKRQQQV 313 (414)
T ss_pred HHHHHHHHhCc---ccCcccEEEEEEChHHHHHHHHHHhC-------------CcCceEEEEECCccchhhcchhhhhhc
Confidence 46778887653 36778999999999999999998764 3578888887776531 1100000000
Q ss_pred -chhHHHHHhhccCC-CCCCCC---CccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEE
Q 027370 85 -GLYRSIFLSIMEGE-ESLPVF---SPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVL 159 (224)
Q Consensus 85 -~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~ 159 (224)
..+...+....... .....+ .......... .......+|+|+++|++|.++|.+.++.+++.. .+.++.+
T Consensus 314 p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~-~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~~~~l~~ 388 (414)
T PRK05077 314 PEMYLDVLASRLGMHDASDEALRVELNRYSLKVQG-LLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS----ADGKLLE 388 (414)
T ss_pred hHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhh-hhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC----CCCeEEE
Confidence 00111111111100 000000 0000000000 001245689999999999999999999877653 5778999
Q ss_pred cCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 160 YPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 160 ~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
++++.|. +..+++++.+.+||++++
T Consensus 389 i~~~~~~---------e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 389 IPFKPVY---------RNFDKALQEISDWLEDRL 413 (414)
T ss_pred ccCCCcc---------CCHHHHHHHHHHHHHHHh
Confidence 9986333 136899999999998764
No 27
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.48 E-value=4.7e-13 Score=102.75 Aligned_cols=65 Identities=17% Similarity=0.236 Sum_probs=51.9
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+....+|+++++|++|.++|.+.++.+.+.+ .+.++++++++||.... +..+++.+.+.+|++++
T Consensus 230 l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~------e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 230 LPAVKCPVLIAWGEKDPWEPVELGRAYANFD----AVEDFIVLPGVGHCPQD------EAPELVNPLIESFVARH 294 (294)
T ss_pred HhhcCCCeEEEEecCCCCCChHHHHHHHhcC----CccceEEeCCCCCChhh------hCHHHHHHHHHHHHhcC
Confidence 4456889999999999999998887765532 45789999999998333 24789999999999763
No 28
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.47 E-value=2.8e-13 Score=103.31 Aligned_cols=63 Identities=13% Similarity=0.229 Sum_probs=53.0
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
+.+..+|+|+++|++|.+++.+.++.+++.+ +++++++++++||+... +..+++.+.+.+||.
T Consensus 219 l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~----~~~~~~~i~~agH~~~~------e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 219 LGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM----PDAQLHVFSRCGHWAQW------EHADAFNRLVIDFLR 281 (282)
T ss_pred HhhCCCCEEEEEccCCCcCCchhHHHHHHhC----CCCEEEEeCCCCcCCcc------cCHHHHHHHHHHHhh
Confidence 3456789999999999999999888888765 67899999999999333 247899999999986
No 29
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.46 E-value=1.7e-12 Score=95.90 Aligned_cols=137 Identities=23% Similarity=0.330 Sum_probs=104.8
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
+.|+..+++|+.++.. .++++|+++|+|+||.+++.++... ..+++.+.+.|.......
T Consensus 93 ~~d~~a~~~~L~~~~~---~~~~~ig~~GfC~GG~~a~~~a~~~--------------~~v~a~v~fyg~~~~~~~---- 151 (236)
T COG0412 93 LADIDAALDYLARQPQ---VDPKRIGVVGFCMGGGLALLAATRA--------------PEVKAAVAFYGGLIADDT---- 151 (236)
T ss_pred HHHHHHHHHHHHhCCC---CCCceEEEEEEcccHHHHHHhhccc--------------CCccEEEEecCCCCCCcc----
Confidence 4688999999988753 6778999999999999999998773 368888888773210000
Q ss_pred hhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcC
Q 027370 82 HNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYP 161 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~ 161 (224)
......++|+|+.+|+.|..+|......+.+.+.+.+.++++.+|+
T Consensus 152 ----------------------------------~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ 197 (236)
T COG0412 152 ----------------------------------ADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYP 197 (236)
T ss_pred ----------------------------------cccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeC
Confidence 0022345899999999999999999999999999888899999999
Q ss_pred CCCCchhhhc-----CCCCCCccHHHHHHHHHHHhhC
Q 027370 162 GKSHTDLFLQ-----DPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 162 ~~~H~~~~~~-----~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
++.|.|.-.. .......++..+++.+|+.+..
T Consensus 198 ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 198 GAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 9999965321 1111335677888999998764
No 30
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.45 E-value=1.2e-12 Score=89.86 Aligned_cols=101 Identities=27% Similarity=0.421 Sum_probs=74.1
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHN 83 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (224)
++.++++++.+. .. ++++++++|||+||.++..++.. .+.+++++.+.+..+ .
T Consensus 45 ~~~~~~~~~~~~---~~-~~~~i~l~G~S~Gg~~a~~~~~~--------------~~~v~~~v~~~~~~~-~-------- 97 (145)
T PF12695_consen 45 AVERVLADIRAG---YP-DPDRIILIGHSMGGAIAANLAAR--------------NPRVKAVVLLSPYPD-S-------- 97 (145)
T ss_dssp HHHHHHHHHHHH---HC-TCCEEEEEEETHHHHHHHHHHHH--------------STTESEEEEESESSG-C--------
T ss_pred HHHHHHHHHHhh---cC-CCCcEEEEEEccCcHHHHHHhhh--------------ccceeEEEEecCccc-h--------
Confidence 455666665421 12 67799999999999999999886 367888988887200 0
Q ss_pred cchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCC
Q 027370 84 RGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGK 163 (224)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~ 163 (224)
........|+++++|++|..++.++.+.+++++. .+.++++++|+
T Consensus 98 --------------------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~ 142 (145)
T PF12695_consen 98 --------------------------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGA 142 (145)
T ss_dssp --------------------------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS
T ss_pred --------------------------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCC
Confidence 0011122599999999999999999999998883 67899999999
Q ss_pred CCc
Q 027370 164 SHT 166 (224)
Q Consensus 164 ~H~ 166 (224)
+|+
T Consensus 143 ~H~ 145 (145)
T PF12695_consen 143 GHF 145 (145)
T ss_dssp -TT
T ss_pred cCc
Confidence 995
No 31
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.45 E-value=1.1e-12 Score=98.23 Aligned_cols=63 Identities=19% Similarity=0.358 Sum_probs=51.8
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
+....+|+++++|++|.++|.+.++.+++.+ .+++++.++++||...+. ..+++.+.+.+||+
T Consensus 194 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~------~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 194 LDRIQHPVLLIANRDDMLVPYTQSLRLAAAL----PNAQLKLLPYGGHASNVT------DPETFNRALLDFLK 256 (257)
T ss_pred hcccCccEEEEecCcCcccCHHHHHHHHHhc----CCceEEEECCCCCCcccc------CHHHHHHHHHHHhc
Confidence 3456789999999999999999988887765 467899999999994332 36789999999986
No 32
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.45 E-value=1.8e-12 Score=97.34 Aligned_cols=64 Identities=9% Similarity=0.127 Sum_probs=51.1
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
....+|+|+++|++|..++.+.++.+.+.+ .++++.++++++|.... +..+++.+.+.+||.++
T Consensus 192 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~------~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 192 PAWPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIAGAGHWVHA------EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCCCeeec------cCHHHHHHHHHHHHhcC
Confidence 345689999999999999887777776654 67899999999998322 23678999999999863
No 33
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.45 E-value=1.2e-12 Score=99.52 Aligned_cols=64 Identities=17% Similarity=0.217 Sum_probs=52.2
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+....+|+|+++|++|.++|.+.++.+.+.+ .+.+++++++ ||..... ..+++.+.+.+|+++.
T Consensus 203 l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~----~~~~~~~i~~-gH~~~~e------~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 203 LHKIQQPTLVLAGDDDPIIPLINMRLLAWRI----PNAELHIIDD-GHLFLIT------RAEAVAPIIMKFLAEE 266 (276)
T ss_pred hhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC----CCCEEEEEcC-CCchhhc------cHHHHHHHHHHHHHHh
Confidence 4466789999999999999999998888765 4678888886 9983332 3689999999999874
No 34
>PLN02965 Probable pheophorbidase
Probab=99.45 E-value=4.3e-12 Score=95.46 Aligned_cols=62 Identities=10% Similarity=0.196 Sum_probs=52.1
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
..+.|+++++|++|..+|...++.+++.+ .++++++++++||+... +..+++.+.+.+|++.
T Consensus 191 ~i~vP~lvi~g~~D~~~~~~~~~~~~~~~----~~a~~~~i~~~GH~~~~------e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 191 AEKVPRVYIKTAKDNLFDPVRQDVMVENW----PPAQTYVLEDSDHSAFF------SVPTTLFQYLLQAVSS 252 (255)
T ss_pred cCCCCEEEEEcCCCCCCCHHHHHHHHHhC----CcceEEEecCCCCchhh------cCHHHHHHHHHHHHHH
Confidence 46789999999999999998888888775 56789999999999333 3478999999999875
No 35
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.44 E-value=3.2e-12 Score=97.11 Aligned_cols=62 Identities=23% Similarity=0.319 Sum_probs=50.4
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
....+|+++++|++|.++|.+.++.+.+.+ .++++..++++||..... ..+++.+.|.+|++
T Consensus 217 ~~i~~P~lii~g~~D~~vp~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 217 PRITIPLHLIAGEEDKAVPPDESKRAATRV----PTATLHVVPGGGHLVHEE------QADGVVGLILQAAE 278 (278)
T ss_pred ccCCCCEEEEEeCCCcccCHHHHHHHHHhc----cCCeEEEECCCCCccccc------CHHHHHHHHHHHhC
Confidence 346789999999999999998888777654 567899999999983322 36799999999974
No 36
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.44 E-value=2.2e-12 Score=99.14 Aligned_cols=66 Identities=11% Similarity=0.113 Sum_probs=50.6
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
..+.+|+|+++|++|.+++.....++.... ..+.++++++++||.... +..+++.+.+.+|+.+..
T Consensus 225 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~------e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 225 ATSDVPKLLINAEPGAILTTGAIRDWCRSW---PNQLEITVFGAGLHFAQE------DSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred ccCCCCeEEEeccCCcccCcHHHHHHHHHh---hhhcceeeccCcchhhhh------cCHHHHHHHHHHHHHHhc
Confidence 346889999999999999665555555443 245789999999999332 247899999999998764
No 37
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.42 E-value=2.8e-13 Score=104.17 Aligned_cols=159 Identities=19% Similarity=0.203 Sum_probs=94.9
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccc-cchhhhhH
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGY-NLLNLVDH 80 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~ 80 (224)
+.|+..+++++.+..+ +|.++|++.|.|+||.+++.++.- .++++..+...+.. ++......
T Consensus 156 ~~D~~ravd~l~slpe---vD~~rI~v~G~SqGG~lal~~aaL--------------d~rv~~~~~~vP~l~d~~~~~~~ 218 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPE---VDGKRIGVTGGSQGGGLALAAAAL--------------DPRVKAAAADVPFLCDFRRALEL 218 (320)
T ss_dssp HHHHHHHHHHHHTSTT---EEEEEEEEEEETHHHHHHHHHHHH--------------SST-SEEEEESESSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC---cCcceEEEEeecCchHHHHHHHHh--------------CccccEEEecCCCccchhhhhhc
Confidence 5689999999998754 788899999999999999998876 35677777666533 33322221
Q ss_pred hhhcch---hHHHHHhhccCCCCCC-CCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccE
Q 027370 81 CHNRGL---YRSIFLSIMEGEESLP-VFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPE 156 (224)
Q Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~ 156 (224)
...... ...++........... .+.. ..--+..+....+++|+++..|-.|.+||+...-..++++. .+++
T Consensus 219 ~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~--L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~---~~K~ 293 (320)
T PF05448_consen 219 RADEGPYPEIRRYFRWRDPHHEREPEVFET--LSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP---GPKE 293 (320)
T ss_dssp T--STTTHHHHHHHHHHSCTHCHHHHHHHH--HHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC-----SSEE
T ss_pred CCccccHHHHHHHHhccCCCcccHHHHHHH--HhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC---CCee
Confidence 110111 1111110000000000 0000 01112224455677999999999999999998888888883 5689
Q ss_pred EEEcCCCCCchhhhcCCCCCCccHH-HHHHHHHHHhh
Q 027370 157 LVLYPGKSHTDLFLQDPLRGGKDDL-FDHIIAVIHAN 192 (224)
Q Consensus 157 ~~~~~~~~H~~~~~~~~~~~~~~~~-~~~i~~fl~~~ 192 (224)
+.+|+..+|. ...+. .+...+||.++
T Consensus 294 l~vyp~~~He----------~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 294 LVVYPEYGHE----------YGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp EEEETT--SS----------TTHHHHHHHHHHHHHH-
T ss_pred EEeccCcCCC----------chhhHHHHHHHHHHhcC
Confidence 9999999998 23455 78899999874
No 38
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.41 E-value=8.2e-13 Score=98.28 Aligned_cols=62 Identities=15% Similarity=0.224 Sum_probs=49.8
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
....+|+++++|++|.++|.+..+.+.+.+ .+.+++++++++|..... ..+++.+.+.+|+.
T Consensus 190 ~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~------~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 190 GAIAVPTLCIAGDQDGSTPPELVREIADLV----PGARFAEIRGAGHIPCVE------QPEAFNAALRDFLR 251 (251)
T ss_pred hhcCCCeEEEEeccCCcCChHHHHHHHHhC----CCceEEEECCCCCccccc------ChHHHHHHHHHHhC
Confidence 345689999999999999998888777765 467899999999984332 36788888988873
No 39
>PRK11071 esterase YqiA; Provisional
Probab=99.40 E-value=1.2e-12 Score=93.79 Aligned_cols=54 Identities=19% Similarity=0.221 Sum_probs=44.9
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
..|++++||++|++||++.+.++++.. ++.+++|++|.+.- .++..+.+.+|++
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~ggdH~f~~--------~~~~~~~i~~fl~ 189 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEEGGNHAFVG--------FERYFNQIVDFLG 189 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEECCCCcchhh--------HHHhHHHHHHHhc
Confidence 368899999999999999999999843 56688999999422 3689999999975
No 40
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=2.8e-12 Score=108.91 Aligned_cols=160 Identities=19% Similarity=0.237 Sum_probs=110.3
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|...+++++.+.. -+|.+||.|+|+|.||.+++.++...+ ..-++..+..+|..++. +.+..
T Consensus 589 v~D~~~~~~~~~~~~---~iD~~ri~i~GwSyGGy~t~~~l~~~~------------~~~fkcgvavaPVtd~~-~yds~ 652 (755)
T KOG2100|consen 589 VKDQIEAVKKVLKLP---FIDRSRVAIWGWSYGGYLTLKLLESDP------------GDVFKCGVAVAPVTDWL-YYDST 652 (755)
T ss_pred hHHHHHHHHHHHhcc---cccHHHeEEeccChHHHHHHHHhhhCc------------CceEEEEEEecceeeee-eeccc
Confidence 578888888888876 489999999999999999999988752 14566668888877766 33222
Q ss_pred hhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCC-EEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEc
Q 027370 82 HNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPP-IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLY 160 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 160 (224)
...+. ......... ..............+.| .|++||+.|..|.++++.+++++|+..|.++++.+|
T Consensus 653 ~tery-----mg~p~~~~~-------~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vy 720 (755)
T KOG2100|consen 653 YTERY-----MGLPSENDK-------GYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVY 720 (755)
T ss_pred ccHhh-----cCCCccccc-------hhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEe
Confidence 21111 000000000 01111111222222233 599999999999999999999999999999999999
Q ss_pred CCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 161 PGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 161 ~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
|+.+|.+.... ....+...+..|+..+..
T Consensus 721 pde~H~is~~~-----~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 721 PDENHGISYVE-----VISHLYEKLDRFLRDCFG 749 (755)
T ss_pred CCCCccccccc-----chHHHHHHHHHHHHHHcC
Confidence 99999933211 246889999999996543
No 41
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.40 E-value=6.4e-12 Score=99.10 Aligned_cols=69 Identities=16% Similarity=0.231 Sum_probs=52.5
Q ss_pred cCCCCCCEEEEeeCCCCccCchHH-HHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDAS-MAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+..+.+||||++|++|.++|.+.. ..+.+.+.+.-.++++++++++||.. ..+..+++.+.|.+||.+.
T Consensus 288 l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~------~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 288 IPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCP------HDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred hhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCc------cccCHHHHHHHHHHHHHhc
Confidence 345678999999999999998743 23444454444678999999999982 2335789999999999863
No 42
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.39 E-value=8.3e-12 Score=87.67 Aligned_cols=130 Identities=27% Similarity=0.382 Sum_probs=96.6
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhc
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNR 84 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (224)
+.+.+.++.++....|++.+||++.|.||||.+++..+.+. +-.+.+.+..++..+.....
T Consensus 74 aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~-------------~~~l~G~~~~s~~~p~~~~~------ 134 (206)
T KOG2112|consen 74 AADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTY-------------PKALGGIFALSGFLPRASIG------ 134 (206)
T ss_pred HHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcc-------------ccccceeeccccccccchhh------
Confidence 45667777777667789999999999999999999999875 23455566555532211000
Q ss_pred chhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCC
Q 027370 85 GLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKS 164 (224)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~ 164 (224)
.....+... .+|++..||+.|++||..-.+...+.++..+..++++.|+|.+
T Consensus 135 ----------------~~~~~~~~~------------~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~ 186 (206)
T KOG2112|consen 135 ----------------LPGWLPGVN------------YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLG 186 (206)
T ss_pred ----------------ccCCccccC------------cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcc
Confidence 000000000 3799999999999999999999999999888889999999999
Q ss_pred CchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 165 HTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 165 H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
|.. ..+-++++..|+.+
T Consensus 187 h~~----------~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 187 HST----------SPQELDDLKSWIKT 203 (206)
T ss_pred ccc----------cHHHHHHHHHHHHH
Confidence 982 34778899999876
No 43
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.39 E-value=4.7e-12 Score=97.63 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=50.2
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+....+|+++++|++|.++|... +.+.+.+... ..+++.++++++|+... +..+++.+.+.+|+.++
T Consensus 235 l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~~------e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 235 LERWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFLQE------DSGEELAEAVLEFIRAT 301 (302)
T ss_pred hhcCCCceEEEecCCCCcccCch-HHHHhhcccc-cccceeeecCCCccchh------hChHHHHHHHHHHHhcC
Confidence 45677999999999999999755 6677665321 12347899999999332 23679999999999764
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.38 E-value=1.1e-11 Score=96.63 Aligned_cols=63 Identities=21% Similarity=0.321 Sum_probs=51.3
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
..|+|+++|++|.+++.+.++.+++++. ..+++++++++++|..... ...+++++.+.+||++
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~--~~~~~l~~~~g~~H~i~~E-----~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLS--ISNKELHTLEDMDHVITIE-----PGNEEVLKKIIEWISN 332 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhcc--CCCcEEEEECCCCCCCccC-----CCHHHHHHHHHHHhhC
Confidence 5799999999999999999998887653 2468999999999993221 1368999999999863
No 45
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.38 E-value=7.5e-12 Score=99.36 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=58.3
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcC-CCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYP-GKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
+..+.+|+|+++|++|.++|++.++.+++.+...++.+++.+++ ++||...+. ..+++.+.+.+||.+...
T Consensus 305 l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le------~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 305 LARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLL------DDPRYGRLVRAFLERAAR 376 (379)
T ss_pred HhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhc------CHHHHHHHHHHHHHhhhh
Confidence 34678899999999999999999999999997666667888775 999994332 367999999999998643
No 46
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.38 E-value=4.9e-12 Score=93.84 Aligned_cols=62 Identities=13% Similarity=0.243 Sum_probs=50.5
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
+...++|+++++|++|.++|.+..+.+.+.+ .++++++++++||+..+. ..+++.+.+.+|+
T Consensus 184 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e------~p~~~~~~i~~fi 245 (245)
T TIGR01738 184 LQNISVPFLRLYGYLDGLVPAKVVPYLDKLA----PHSELYIFAKAAHAPFLS------HAEAFCALLVAFK 245 (245)
T ss_pred HhcCCCCEEEEeecCCcccCHHHHHHHHHhC----CCCeEEEeCCCCCCcccc------CHHHHHHHHHhhC
Confidence 3467789999999999999988887776654 578999999999993332 4789999999885
No 47
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.37 E-value=4.7e-12 Score=88.99 Aligned_cols=144 Identities=15% Similarity=0.149 Sum_probs=90.3
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
.+|+..+++++... +..=-+++|||-||.+++.++... ..++.++.++|.|+.......-
T Consensus 89 adDL~sV~q~~s~~------nr~v~vi~gHSkGg~Vvl~ya~K~--------------~d~~~viNcsGRydl~~~I~eR 148 (269)
T KOG4667|consen 89 ADDLHSVIQYFSNS------NRVVPVILGHSKGGDVVLLYASKY--------------HDIRNVINCSGRYDLKNGINER 148 (269)
T ss_pred HHHHHHHHHHhccC------ceEEEEEEeecCccHHHHHHHHhh--------------cCchheEEcccccchhcchhhh
Confidence 46888888888652 111256899999999999999874 4477788899988877655311
Q ss_pred hhcchhHHHHHhhccCCC-----CCCCCCccccccC---C--CccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHc
Q 027370 82 HNRGLYRSIFLSIMEGEE-----SLPVFSPAVRIKD---P--SIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKV 151 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~--~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~ 151 (224)
-......+....-+.... .-..+.+....+. . ..-.-.+.+||+|-+||.+|.+||.+.+..|++.+
T Consensus 149 lg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i--- 225 (269)
T KOG4667|consen 149 LGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKII--- 225 (269)
T ss_pred hcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhc---
Confidence 111221111111110100 0011111111100 0 00111346799999999999999999999999998
Q ss_pred CCccEEEEcCCCCCchhh
Q 027370 152 GAKPELVLYPGKSHTDLF 169 (224)
Q Consensus 152 ~~~~~~~~~~~~~H~~~~ 169 (224)
++.+++++||++|.+..
T Consensus 226 -~nH~L~iIEgADHnyt~ 242 (269)
T KOG4667|consen 226 -PNHKLEIIEGADHNYTG 242 (269)
T ss_pred -cCCceEEecCCCcCccc
Confidence 44799999999999533
No 48
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.37 E-value=6.4e-12 Score=98.81 Aligned_cols=69 Identities=19% Similarity=0.310 Sum_probs=53.9
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+....+|+++++|++|.++|++.+..+++.+. +.++++++++ +||...+.+.. ..+++.+.+.+|+.++
T Consensus 282 l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~---~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 282 LKNIKMPILNIYAERDHLVPPDASKALNDLVS--SEDYTELSFP-GGHIGIYVSGK---AQKEVPPAIGKWLQAR 350 (350)
T ss_pred HHhCCCCeEEEecCCCCcCCHHHHHHHHHHcC--CCCeEEEEcC-CCCEEEEECch---hHhhhhHHHHHHHHhC
Confidence 44567899999999999999999999988773 3467888888 68875444322 3579999999999764
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.35 E-value=1.2e-11 Score=96.93 Aligned_cols=66 Identities=14% Similarity=0.271 Sum_probs=53.9
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCC-CCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPG-KSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
...+.+|+|+++|++|.++|.+.+.++++.+ .++.+++++++ +||...+. ..+++.+.+.+||++.
T Consensus 273 l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i---~p~a~l~~i~~~aGH~~~lE------~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 273 PEAIRVPTVVVAVEGDRLVPLADLVELAEGL---GPRGSLRVLRSPYGHDAFLK------ETDRIDAILTTALRST 339 (343)
T ss_pred hhcCCCCeEEEEeCCCEeeCHHHHHHHHHHc---CCCCeEEEEeCCccHHHHhc------CHHHHHHHHHHHHHhc
Confidence 3456789999999999999998888888766 34689999985 99994332 3789999999999865
No 50
>PRK07581 hypothetical protein; Validated
Probab=99.35 E-value=1.7e-11 Score=95.98 Aligned_cols=66 Identities=17% Similarity=0.084 Sum_probs=54.0
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCC-CCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPG-KSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
+.++.+|||+++|++|.++|.+.++.+++.+ .+++++++++ +||..... ..+++.+.|.+||.+..
T Consensus 271 L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i----p~a~l~~i~~~~GH~~~~~------~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 271 LGSITAKTFVMPISTDLYFPPEDCEAEAALI----PNAELRPIESIWGHLAGFG------QNPADIAFIDAALKELL 337 (339)
T ss_pred HhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC----CCCeEEEeCCCCCcccccc------CcHHHHHHHHHHHHHHH
Confidence 4457799999999999999999888887766 5679999999 89984443 36799999999998753
No 51
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.33 E-value=2.3e-11 Score=96.24 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=56.5
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCC-CCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPG-KSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
+..+++|+|+++|+.|.++|.+.++.+++.+...+.+++++++++ .||..... ..+++.+.|.+||++
T Consensus 319 L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le------~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 319 LSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVF------DIHLFEKKIYEFLNR 387 (389)
T ss_pred HhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhc------CHHHHHHHHHHHHcc
Confidence 335688999999999999999999999998876556789999986 89993332 367999999999975
No 52
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.33 E-value=3.5e-11 Score=91.42 Aligned_cols=62 Identities=23% Similarity=0.364 Sum_probs=47.2
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
+....+|+++++|++|.+ +...++.+.+.+ .++++++++++||...+. ..+++.+.|.+|++
T Consensus 227 l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e------~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 227 LSEIKVPTLLTVGEFDTM-TPEAAREMQELI----AGSRLVVFPDGSHMTMIE------DPEVYFKLLSDFIR 288 (288)
T ss_pred hhccCCCEEEEecCCCcc-CHHHHHHHHHhc----cCCeEEEeCCCCCCcccC------CHHHHHHHHHHHhC
Confidence 345678999999999985 556666666654 467899999999983332 36899999999974
No 53
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.32 E-value=5.3e-11 Score=101.47 Aligned_cols=174 Identities=10% Similarity=0.127 Sum_probs=104.2
Q ss_pred cchHHHHHHHHHhcccc-----------cCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecc
Q 027370 2 VKDVSQGISFVFNNIAD-----------YGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSG 70 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~-----------~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 70 (224)
.+|..++|+|+..+... -.=...+|+++|.|+||.+++.+|... ++.+++++..++
T Consensus 305 ~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~-------------pp~LkAIVp~a~ 371 (767)
T PRK05371 305 IESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTG-------------VEGLETIIPEAA 371 (767)
T ss_pred HHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhC-------------CCcceEEEeeCC
Confidence 36889999999864211 011246899999999999999888764 456677776665
Q ss_pred cccchhhhhHhh---------hc--chhHH-HHH----------------hhccC----CCCC-CCCCccccccCCCccc
Q 027370 71 GYNLLNLVDHCH---------NR--GLYRS-IFL----------------SIMEG----EESL-PVFSPAVRIKDPSIRD 117 (224)
Q Consensus 71 ~~~~~~~~~~~~---------~~--~~~~~-~~~----------------~~~~~----~~~~-~~~~~~~~~~~~~~~~ 117 (224)
..+......... .. ..... .+. ..... .... ..+. ..+...+....
T Consensus 372 is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~fW~~rn~~~~ 450 (767)
T PRK05371 372 ISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYN-DFWDDRNYLKD 450 (767)
T ss_pred CCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCcc-HHHHhCCHhhH
Confidence 544322211000 00 00000 000 00000 0000 0000 01111222234
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhChh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 195 (224)
..++++|+|++||..|..|+..++.++++++++.+.++++.+.+ .+|..... ....++.+.+.+|+.+.+..
T Consensus 451 ~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~-----~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 451 ADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNN-----WQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred hhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCc-----hhHHHHHHHHHHHHHhcccc
Confidence 45678999999999999999999999999998878888887765 57862211 12457788899999887653
No 54
>PRK06489 hypothetical protein; Provisional
Probab=99.32 E-value=1.4e-11 Score=97.25 Aligned_cols=65 Identities=15% Similarity=0.225 Sum_probs=52.1
Q ss_pred cCCCCCCEEEEeeCCCCccCchHH--HHHHHHHHHcCCccEEEEcCCC----CCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDAS--MAFADALQKVGAKPELVLYPGK----SHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~--~~~~~~l~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
+..+++|+|+++|++|.++|.+.+ +.+++.+ ++.++++++++ ||.. . +..+++.+.|.+||++
T Consensus 288 L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i----p~a~l~~i~~a~~~~GH~~-~------e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 288 LEKIKAPVLAINSADDERNPPETGVMEAALKRV----KHGRLVLIPASPETRGHGT-T------GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred HHhCCCCEEEEecCCCcccChhhHHHHHHHHhC----cCCeEEEECCCCCCCCccc-c------cCHHHHHHHHHHHHHh
Confidence 445789999999999999998765 6676665 56799999996 9983 2 1478999999999987
Q ss_pred hC
Q 027370 192 ND 193 (224)
Q Consensus 192 ~~ 193 (224)
..
T Consensus 357 ~~ 358 (360)
T PRK06489 357 VP 358 (360)
T ss_pred cc
Confidence 53
No 55
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.31 E-value=1.7e-11 Score=92.29 Aligned_cols=64 Identities=11% Similarity=0.221 Sum_probs=50.8
Q ss_pred ccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 117 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
.+....+|+|+++|++|.++|.+.++.+.+.+ .++++.+++++||+... +..+++.+.+.+|-.
T Consensus 191 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i----~~~~~~~i~~~gH~~~~------e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 191 PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW----PHSESYIFAKAAHAPFI------SHPAEFCHLLVALKQ 254 (256)
T ss_pred HHhhcCCCeEEEecCCCccCCHHHHHHHHHhC----CCCeEEEeCCCCCCccc------cCHHHHHHHHHHHhc
Confidence 34457789999999999999988877776665 67899999999999322 247888888888753
No 56
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.31 E-value=2e-11 Score=93.42 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=46.4
Q ss_pred CCCEEEEeeCCCCccCch-HHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 122 LPPIILFHGTSDYSIPSD-ASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
.+||++++|++|.++++. ..+.+.+.+ ++.++++++++||.... +..+++.+.+.+|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i----p~~~~~~i~~aGH~~~~------e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF----PDHVLVELPNAKHFIQE------DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc----CCCeEEEcCCCcccccc------cCHHHHHHHHHHhc
Confidence 689999999999988664 456666655 56899999999999322 34789999999997
No 57
>PRK10985 putative hydrolase; Provisional
Probab=99.31 E-value=8.2e-11 Score=91.57 Aligned_cols=169 Identities=13% Similarity=0.091 Sum_probs=91.6
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|+..+++++.+.. + ..+++++||||||++++.++..... ...+.+.+.++++++........
T Consensus 114 ~~D~~~~i~~l~~~~---~--~~~~~~vG~S~GG~i~~~~~~~~~~-----------~~~~~~~v~i~~p~~~~~~~~~~ 177 (324)
T PRK10985 114 TEDARFFLRWLQREF---G--HVPTAAVGYSLGGNMLACLLAKEGD-----------DLPLDAAVIVSAPLMLEACSYRM 177 (324)
T ss_pred hHHHHHHHHHHHHhC---C--CCCEEEEEecchHHHHHHHHHhhCC-----------CCCccEEEEEcCCCCHHHHHHHH
Confidence 468888999998743 2 2479999999999988877766421 12367777777766543221111
Q ss_pred hh--cchhHHHHH------------hhccCC----------CCCCCC-----Cc--------cccccCCCccccCCCCCC
Q 027370 82 HN--RGLYRSIFL------------SIMEGE----------ESLPVF-----SP--------AVRIKDPSIRDASSLLPP 124 (224)
Q Consensus 82 ~~--~~~~~~~~~------------~~~~~~----------~~~~~~-----~~--------~~~~~~~~~~~~~~~~~P 124 (224)
.. ...+...+. ...... .....+ .+ ......+....+..+..|
T Consensus 178 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P 257 (324)
T PRK10985 178 EQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKP 257 (324)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCC
Confidence 00 001111000 000000 000000 00 000001112334456789
Q ss_pred EEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 125 IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 125 ~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
+++++|++|.+++.+....+.+. ..++++.+++++||...+.+. ......=+-+.+.+|+..
T Consensus 258 ~lii~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~GH~~~~~g~-~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 258 TLIIHAKDDPFMTHEVIPKPESL----PPNVEYQLTEHGGHVGFVGGT-LLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred EEEEecCCCCCCChhhChHHHHh----CCCeEEEECCCCCceeeCCCC-CCCCCccHHHHHHHHHHH
Confidence 99999999999987766655332 357899999999999544432 111111233446777754
No 58
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.31 E-value=2.8e-11 Score=97.68 Aligned_cols=63 Identities=17% Similarity=0.336 Sum_probs=52.8
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
.+.+|+||++|++|.++|.+.++.+++.+ +++++++++++||...+.. ..+++.+.+.+|++.
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~i----P~a~l~vI~~aGH~~~v~e-----~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKV----PRARVKVIDDKDHITIVVG-----RQKEFARELEEIWRR 478 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhC----CCCEEEEeCCCCCcchhhc-----CHHHHHHHHHHHhhc
Confidence 35789999999999999999999888776 6789999999999944322 367999999999865
No 59
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.31 E-value=3.5e-11 Score=89.30 Aligned_cols=61 Identities=16% Similarity=0.274 Sum_probs=44.3
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
....+|+++++|++|..++ +..+. +.+...+++++++++++|...+. ..+++.+.+.+|++
T Consensus 191 ~~~~~P~l~i~g~~D~~~~-~~~~~----~~~~~~~~~~~~~~~~gH~~~~e------~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 191 QALTIPVLYLCGEKDEKFV-QIAKE----MQKLLPNLTLVIIANAGHNIHLE------NPEAFAKILLAFLE 251 (251)
T ss_pred hCCCCceEEEeeCcchHHH-HHHHH----HHhcCCCCcEEEEcCCCCCcCcc------ChHHHHHHHHHHhC
Confidence 3567899999999997653 33333 33344678999999999983332 35789999999873
No 60
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.30 E-value=3.8e-11 Score=92.85 Aligned_cols=65 Identities=20% Similarity=0.363 Sum_probs=54.1
Q ss_pred cCCCC-CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLL-PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~-~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..++. +|++|++|+.|.++|.+.+..+.+.+ .++++++++++||. +..+..+++.+.|..|+...
T Consensus 259 ~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~----pn~~~~~I~~~gH~------~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 259 IKKIWKCPVLIIWGDKDQIVPLELAEELKKKL----PNAELVEIPGAGHL------PHLERPEEVAALLRSFIARL 324 (326)
T ss_pred hccccCCceEEEEcCcCCccCHHHHHHHHhhC----CCceEEEeCCCCcc------cccCCHHHHHHHHHHHHHHh
Confidence 33455 89999999999999999777776664 78999999999999 33346889999999999875
No 61
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.30 E-value=1.3e-10 Score=86.65 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=43.3
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
..+..+|+++++|++|..+. .+++. .++++++++++||...+. ..+++.+.|.+|+++
T Consensus 184 l~~i~~P~lii~G~~D~~~~-----~~~~~-----~~~~~~~i~~~gH~~~~e------~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 184 LQALTFPFYYLCGERDSKFQ-----ALAQQ-----LALPLHVIPNAGHNAHRE------NPAAFAASLAQILRL 241 (242)
T ss_pred hhccCCCeEEEEeCCcchHH-----HHHHH-----hcCeEEEeCCCCCchhhh------ChHHHHHHHHHHHhh
Confidence 34567899999999997531 22222 267999999999984332 368999999999975
No 62
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.29 E-value=9.2e-12 Score=98.66 Aligned_cols=60 Identities=18% Similarity=0.334 Sum_probs=46.9
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
....+|+++++|++|.++|.++++.+. .++++.+++++||...+. ..+++.+.|.+|+++
T Consensus 311 ~~i~~Pvlii~g~~D~~vp~~~~~~l~-------~~~~~~~~~~~gH~~~~e------~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 311 ASLAIPVLVIWGEQDRIIPAAHAQGLP-------DGVAVHVLPGAGHMPQME------AAADVNRLLAEFLGK 370 (371)
T ss_pred hcCCCCEEEEEECCCCccCHHHHhhcc-------CCCeEEEeCCCCCChhhh------CHHHHHHHHHHHhcc
Confidence 346789999999999999987665432 357899999999984332 357899999999875
No 63
>PLN02511 hydrolase
Probab=99.29 E-value=8.2e-11 Score=93.61 Aligned_cols=171 Identities=17% Similarity=0.200 Sum_probs=92.6
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
.+|+..+++++..... ..+++++||||||++++.++.+.+.. ..+.+.+.++.+.+.......+
T Consensus 156 ~~Dl~~~i~~l~~~~~-----~~~~~lvG~SlGg~i~~~yl~~~~~~-----------~~v~~~v~is~p~~l~~~~~~~ 219 (388)
T PLN02511 156 TGDLRQVVDHVAGRYP-----SANLYAAGWSLGANILVNYLGEEGEN-----------CPLSGAVSLCNPFDLVIADEDF 219 (388)
T ss_pred hHHHHHHHHHHHHHCC-----CCCEEEEEechhHHHHHHHHHhcCCC-----------CCceEEEEECCCcCHHHHHHHH
Confidence 5788999999977432 24799999999999999999876422 1255555555444331100000
Q ss_pred h-------hcch---hHHHHHh---h----c--------cCCCCCC-----------CCC-cc-ccccCCCccccCCCCC
Q 027370 82 H-------NRGL---YRSIFLS---I----M--------EGEESLP-----------VFS-PA-VRIKDPSIRDASSLLP 123 (224)
Q Consensus 82 ~-------~~~~---~~~~~~~---~----~--------~~~~~~~-----------~~~-~~-~~~~~~~~~~~~~~~~ 123 (224)
. ...+ ....+.. . . ....... .+. .. .+...+....+..+.+
T Consensus 220 ~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~v 299 (388)
T PLN02511 220 HKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRV 299 (388)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCC
Confidence 0 0000 0000000 0 0 0000000 000 00 0011122345556789
Q ss_pred CEEEEeeCCCCccCchHH-HHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCC-CCccHHHHHHHHHHHhhC
Q 027370 124 PIILFHGTSDYSIPSDAS-MAFADALQKVGAKPELVLYPGKSHTDLFLQDPLR-GGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 124 P~lii~g~~D~~vp~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~~~~~~~~i~~fl~~~~ 193 (224)
|+|+++|++|+++|.... ...++ ...++++.+++++||...+.. +.. ....=+.+.+.+|++...
T Consensus 300 PtLiI~g~dDpi~p~~~~~~~~~~----~~p~~~l~~~~~gGH~~~~E~-p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 300 PLLCIQAANDPIAPARGIPREDIK----ANPNCLLIVTPSGGHLGWVAG-PEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred CeEEEEcCCCCcCCcccCcHhHHh----cCCCEEEEECCCcceeccccC-CCCCCCCccHHHHHHHHHHHHH
Confidence 999999999999997543 22322 246889999999999843322 210 001114677888887653
No 64
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.28 E-value=4e-11 Score=94.37 Aligned_cols=67 Identities=22% Similarity=0.346 Sum_probs=51.0
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEE-EcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELV-LYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
+..+.+|+|+++|++|.++|.+.++.+++.+......++++ +++++||...+. ..+++.+.|.+||+
T Consensus 284 l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le------~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 284 LSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLV------ETDQVEELIRGFLR 351 (351)
T ss_pred HhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhc------CHHHHHHHHHHHhC
Confidence 44567899999999999999999999999886432222333 457899994332 47899999999974
No 65
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.28 E-value=2.3e-11 Score=88.95 Aligned_cols=116 Identities=21% Similarity=0.224 Sum_probs=71.4
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh--hhhH
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN--LVDH 80 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~ 80 (224)
.|+...++++.+ .+++++++++|+|+||||.+++.++..+ +..+.+.+..+|...... ....
T Consensus 77 ~~~~~~i~~~~~---~~~id~~~i~l~G~S~Gg~~a~~~a~~~-------------p~~~~~~~~~~g~~~~~~~~~~~~ 140 (212)
T TIGR01840 77 ESLHQLIDAVKA---NYSIDPNRVYVTGLSAGGGMTAVLGCTY-------------PDVFAGGASNAGLPYGEASSSISA 140 (212)
T ss_pred HHHHHHHHHHHH---hcCcChhheEEEEECHHHHHHHHHHHhC-------------chhheEEEeecCCcccccccchhh
Confidence 355667777766 4568889999999999999999999876 455777777776432110 0000
Q ss_pred hhh---cchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHc
Q 027370 81 CHN---RGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKV 151 (224)
Q Consensus 81 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~ 151 (224)
... ......+.. ... ..........+|++|+||++|.+||++.++.+++++++.
T Consensus 141 ~~~~~~~~~~~~~~~-~~~----------------~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 141 TPQMCTAATAASVCR-LVR----------------GMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HhhcCCCCCHHHHHH-HHh----------------ccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 000 000000000 000 000111123467899999999999999999999998754
No 66
>PLN02578 hydrolase
Probab=99.27 E-value=6.3e-11 Score=93.33 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=50.1
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
+...++|+++++|++|.++|.+.++.+.+.+ ++.+++++ ++||+. ..+..+++.+.|.+|++
T Consensus 292 l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~----p~a~l~~i-~~GH~~------~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 292 LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY----PDTTLVNL-QAGHCP------HDEVPEQVNKALLEWLS 353 (354)
T ss_pred hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC----CCCEEEEe-CCCCCc------cccCHHHHHHHHHHHHh
Confidence 3456789999999999999998888877765 56788888 589993 23357899999999986
No 67
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.27 E-value=1.5e-10 Score=92.52 Aligned_cols=68 Identities=12% Similarity=0.140 Sum_probs=50.5
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhChh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 195 (224)
+....+|+++++|++|.+++ .....+.+.+ +.++++++++++||..... ..+++.+.+.+|++..+..
T Consensus 321 l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~~aGH~~~~E------~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 321 ASEWKVPTTFIYGRHDWMNY-EGAVEARKRM---KVPCEIIRVPQGGHFVFLD------NPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred cccCCCCEEEEEeCCCCCCc-HHHHHHHHHc---CCCCcEEEeCCCCCeeecc------CHHHHHHHHHHHHHHhccC
Confidence 44567899999999998765 4555554443 3468899999999983332 3679999999999887654
No 68
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.27 E-value=8.3e-12 Score=87.92 Aligned_cols=151 Identities=16% Similarity=0.193 Sum_probs=99.2
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh----hh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN----LV 78 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~ 78 (224)
-|..++++|+-++.+ .|..+++++|-|.||.+|..+|.... .++.+++...-...+.. +.
T Consensus 131 lDs~avldyl~t~~~---~dktkivlfGrSlGGAvai~lask~~-------------~ri~~~ivENTF~SIp~~~i~~v 194 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPD---LDKTKIVLFGRSLGGAVAIHLASKNS-------------DRISAIIVENTFLSIPHMAIPLV 194 (300)
T ss_pred ccHHHHHHHHhcCcc---CCcceEEEEecccCCeeEEEeeccch-------------hheeeeeeechhccchhhhhhee
Confidence 488999999988764 67789999999999999998887753 34444444332222210 00
Q ss_pred hHhhhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEE
Q 027370 79 DHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELV 158 (224)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~ 158 (224)
..+..+ .... .+..+.+ .+. ........|.|++.|..|.+||+.+.+.+++.+.. ..+++.
T Consensus 195 ~p~~~k-~i~~----lc~kn~~---~S~---------~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S--~~Krl~ 255 (300)
T KOG4391|consen 195 FPFPMK-YIPL----LCYKNKW---LSY---------RKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPS--RTKRLA 255 (300)
T ss_pred ccchhh-HHHH----HHHHhhh---cch---------hhhccccCceEEeecCccccCCcHHHHHHHHhCch--hhhhhe
Confidence 000000 0000 0000000 010 01112346999999999999999999999998742 467999
Q ss_pred EcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhChh
Q 027370 159 LYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 159 ~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 195 (224)
.+|++.|.+.+. -+-.++.|.+||.+....
T Consensus 256 eFP~gtHNDT~i-------~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 256 EFPDGTHNDTWI-------CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred eCCCCccCceEE-------eccHHHHHHHHHHHhccC
Confidence 999999997554 357899999999997654
No 69
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.26 E-value=5.2e-11 Score=82.43 Aligned_cols=121 Identities=17% Similarity=0.238 Sum_probs=85.8
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|+..+++|++++..+ ..-..++|+|.|+++++.++.+. +....++..++..+...+
T Consensus 85 ~~Da~aaldW~~~~hp~----s~~~~l~GfSFGa~Ia~~la~r~--------------~e~~~~is~~p~~~~~df---- 142 (210)
T COG2945 85 LEDAAAALDWLQARHPD----SASCWLAGFSFGAYIAMQLAMRR--------------PEILVFISILPPINAYDF---- 142 (210)
T ss_pred HHHHHHHHHHHHhhCCC----chhhhhcccchHHHHHHHHHHhc--------------ccccceeeccCCCCchhh----
Confidence 57999999999997642 22357899999999999999884 344555555543320000
Q ss_pred hhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcC
Q 027370 82 HNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYP 161 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~ 161 (224)
..+...-.|.++++|+.|.++......++++. .+.++++++
T Consensus 143 ----------------------------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~ 183 (210)
T COG2945 143 ----------------------------------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-----IKITVITIP 183 (210)
T ss_pred ----------------------------------hhccCCCCCceeEecChhhhhcHHHHHHhhcC-----CCCceEEec
Confidence 00111126899999999999888777776663 567889999
Q ss_pred CCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 162 GKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 162 ~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
+++|+|.- .-..+.+.+.+|+.
T Consensus 184 ~a~HFF~g-------Kl~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFHG-------KLIELRDTIADFLE 205 (210)
T ss_pred CCCceecc-------cHHHHHHHHHHHhh
Confidence 99999322 25688888999985
No 70
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.25 E-value=2e-11 Score=85.22 Aligned_cols=135 Identities=21% Similarity=0.302 Sum_probs=97.7
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
+.|....++|+.+..+ +.+++.+.|||+|+++++.+..+.. .+++.+.+..+|.|++..+....
T Consensus 118 ~~~~~~gv~filk~~~----n~k~l~~gGHSaGAHLa~qav~R~r------------~prI~gl~l~~GvY~l~EL~~te 181 (270)
T KOG4627|consen 118 MTQFTHGVNFILKYTE----NTKVLTFGGHSAGAHLAAQAVMRQR------------SPRIWGLILLCGVYDLRELSNTE 181 (270)
T ss_pred HHHHHHHHHHHHHhcc----cceeEEEcccchHHHHHHHHHHHhc------------CchHHHHHHHhhHhhHHHHhCCc
Confidence 3567788889887653 3457999999999999999888743 57899999999999888775433
Q ss_pred hhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcC
Q 027370 82 HNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYP 161 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~ 161 (224)
....+ -...+.....+++... ....+.|+|++.|+.|..-..+|.+.|+..++ ..++..++
T Consensus 182 ~g~dl--------gLt~~~ae~~Scdl~~-------~~~v~~~ilVv~~~~espklieQnrdf~~q~~----~a~~~~f~ 242 (270)
T KOG4627|consen 182 SGNDL--------GLTERNAESVSCDLWE-------YTDVTVWILVVAAEHESPKLIEQNRDFADQLR----KASFTLFK 242 (270)
T ss_pred ccccc--------CcccchhhhcCccHHH-------hcCceeeeeEeeecccCcHHHHhhhhHHHHhh----hcceeecC
Confidence 22111 0122333334444433 23345789999999998777899999999984 36899999
Q ss_pred CCCCchhhhc
Q 027370 162 GKSHTDLFLQ 171 (224)
Q Consensus 162 ~~~H~~~~~~ 171 (224)
+.+|..++..
T Consensus 243 n~~hy~I~~~ 252 (270)
T KOG4627|consen 243 NYDHYDIIEE 252 (270)
T ss_pred CcchhhHHHH
Confidence 9999976643
No 71
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.24 E-value=1.8e-10 Score=89.04 Aligned_cols=57 Identities=19% Similarity=0.376 Sum_probs=47.1
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
.+|+|+++|++|.++|.+.+..+++.+ .++++++++++||.. . .++.++.|.+|+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~gH~~-~--------~~~~~~~i~~~~~~ 304 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAF----PEAELKVTNNAGHSA-F--------DPNNLAALVHALET 304 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhC----CCCEEEEECCCCCCC-C--------ChHHHHHHHHHHHH
Confidence 479999999999999999999888875 468999999999992 1 34677888887764
No 72
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.21 E-value=1.1e-11 Score=90.77 Aligned_cols=46 Identities=30% Similarity=0.624 Sum_probs=37.5
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhh
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLF 169 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 169 (224)
...+|+++++|++|.+++.+..+.+.+.+ .+++++++++++|...+
T Consensus 174 ~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 174 RIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVVIPGAGHFLFL 219 (228)
T ss_dssp GSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEETTSSSTHHH
T ss_pred ccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCccHH
Confidence 45689999999999999877777666553 67899999999999433
No 73
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.20 E-value=7.4e-11 Score=89.66 Aligned_cols=163 Identities=15% Similarity=0.064 Sum_probs=87.5
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh-----h
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN-----L 77 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~ 77 (224)
+|+.++++++.+... +. ++++++|||+||.+++.++.. ...+++++..++.+.... .
T Consensus 83 ~d~~~~~~~l~~~~~--g~--~~i~l~G~S~Gg~~a~~~a~~--------------~~~v~~lil~~p~~~~~~~~~~~~ 144 (274)
T TIGR03100 83 ADIAAAIDAFREAAP--HL--RRIVAWGLCDAASAALLYAPA--------------DLRVAGLVLLNPWVRTEAAQAASR 144 (274)
T ss_pred HHHHHHHHHHHhhCC--CC--CcEEEEEECHHHHHHHHHhhh--------------CCCccEEEEECCccCCcccchHHH
Confidence 578889998876431 22 479999999999999988754 246777777776543211 0
Q ss_pred hhHhhhcchh-HHHHHhhccCCCC--------------CCCCC--cccc-ccCCCccccCCCCCCEEEEeeCCCCccCch
Q 027370 78 VDHCHNRGLY-RSIFLSIMEGEES--------------LPVFS--PAVR-IKDPSIRDASSLLPPIILFHGTSDYSIPSD 139 (224)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~~~~~~~--------------~~~~~--~~~~-~~~~~~~~~~~~~~P~lii~g~~D~~vp~~ 139 (224)
.......... ...+.....+... ..... +... ........+....+|+++++|+.|...+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~ 224 (274)
T TIGR03100 145 IRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEF 224 (274)
T ss_pred HHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHH
Confidence 1000000000 0000000000000 00000 0000 000111222345789999999999874311
Q ss_pred H-----HHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 140 A-----SMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 140 ~-----~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
. +..+.+.+. ..++++..+++++|.... +...+++.+.|.+||+
T Consensus 225 ~~~~~~~~~~~~~l~--~~~v~~~~~~~~~H~l~~-----e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 225 ADSVLGEPAWRGALE--DPGIERVEIDGADHTFSD-----RVWREWVAARTTEWLR 273 (274)
T ss_pred HHHhccChhhHHHhh--cCCeEEEecCCCCccccc-----HHHHHHHHHHHHHHHh
Confidence 1 022333231 267899999999997212 1236899999999995
No 74
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=2.8e-10 Score=91.84 Aligned_cols=158 Identities=16% Similarity=0.144 Sum_probs=101.7
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|..++++|+.++.. -+|.+||+|-|+|.||++++....+. +.-++..|.-++..+..-+...+
T Consensus 707 ~eDQVeglq~Laeq~g--fidmdrV~vhGWSYGGYLSlm~L~~~-------------P~IfrvAIAGapVT~W~~YDTgY 771 (867)
T KOG2281|consen 707 VEDQVEGLQMLAEQTG--FIDMDRVGVHGWSYGGYLSLMGLAQY-------------PNIFRVAIAGAPVTDWRLYDTGY 771 (867)
T ss_pred ehhhHHHHHHHHHhcC--cccchheeEeccccccHHHHHHhhcC-------------cceeeEEeccCcceeeeeecccc
Confidence 5789999999988754 47889999999999999999988876 34556566555433322211111
Q ss_pred hhcchhHHHHHhhccCCCCCCCC-CccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEc
Q 027370 82 HNRGLYRSIFLSIMEGEESLPVF-SPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLY 160 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 160 (224)
. ..+......++..-.. +-..... .+..-....|++||--|+.|-+.+...+...+.+.|++.++.+|
T Consensus 772 T------ERYMg~P~~nE~gY~agSV~~~Ve-----klpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~If 840 (867)
T KOG2281|consen 772 T------ERYMGYPDNNEHGYGAGSVAGHVE-----KLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIF 840 (867)
T ss_pred h------hhhcCCCccchhcccchhHHHHHh-----hCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEc
Confidence 1 1111111111111000 0000000 11111135999999999999999999999999999999999999
Q ss_pred CCCCCchhhhcCCCC-CCccHHHHHHHHHHHh
Q 027370 161 PGKSHTDLFLQDPLR-GGKDDLFDHIIAVIHA 191 (224)
Q Consensus 161 ~~~~H~~~~~~~~~~-~~~~~~~~~i~~fl~~ 191 (224)
|+..|. ... +...-+-..+..|+++
T Consensus 841 P~ERHs------iR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 841 PNERHS------IRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred cccccc------cCCCccchhHHHHHHHHHhh
Confidence 999998 222 2344555668888875
No 75
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.16 E-value=2.4e-11 Score=84.72 Aligned_cols=67 Identities=9% Similarity=0.102 Sum_probs=53.3
Q ss_pred cccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 116 RDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 116 ~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..+.+++||+||+||+.|++|+..+..-+-+.. .-.++++.+.++|.+.+ . .++++.+.+.+||++.
T Consensus 210 ~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~----~~a~~~~~peGkHn~hL-r-----ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 210 LVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK----SLAKVEIHPEGKHNFHL-R-----YAKEFNKLVLDFLKST 276 (277)
T ss_pred hhcccccCCeeEeeCCcCCCCCCCCccchhhhc----ccceEEEccCCCcceee-e-----chHHHHHHHHHHHhcc
Confidence 445567899999999999999988777555543 45799999999999433 2 3789999999999864
No 76
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.13 E-value=1e-09 Score=77.98 Aligned_cols=143 Identities=13% Similarity=0.100 Sum_probs=78.8
Q ss_pred HHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcc
Q 027370 6 SQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG 85 (224)
Q Consensus 6 ~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (224)
..+++.+.+.+.+. .++.+.|+|.|+||+.|.+++.+.. ++. +.+.+.......+.......
T Consensus 43 ~~a~~~l~~~i~~~--~~~~~~liGSSlGG~~A~~La~~~~---------------~~a-vLiNPav~p~~~l~~~iG~~ 104 (187)
T PF05728_consen 43 EEAIAQLEQLIEEL--KPENVVLIGSSLGGFYATYLAERYG---------------LPA-VLINPAVRPYELLQDYIGEQ 104 (187)
T ss_pred HHHHHHHHHHHHhC--CCCCeEEEEEChHHHHHHHHHHHhC---------------CCE-EEEcCCCCHHHHHHHhhCcc
Confidence 44555555554433 2345999999999999999987742 333 55666555444433322211
Q ss_pred hhHHHHHhhccCCCCCCCCCccccccCCCcccc-CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCC
Q 027370 86 LYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDA-SSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKS 164 (224)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~ 164 (224)
.... ..+. -.+..........+... .....++++++++.|++++...+...++ .+...+.+|++
T Consensus 105 ~~~~-------~~e~-~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~~-------~~~~~i~~ggd 169 (187)
T PF05728_consen 105 TNPY-------TGES-YELTEEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAVAKYR-------GCAQIIEEGGD 169 (187)
T ss_pred ccCC-------CCcc-ceechHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHHHHhc-------CceEEEEeCCC
Confidence 1000 0000 00111110100000000 1122589999999999999866655543 23445668899
Q ss_pred CchhhhcCCCCCCccHHHHHHHHHH
Q 027370 165 HTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 165 H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
|.+.- -++.+..|.+|+
T Consensus 170 H~f~~--------f~~~l~~i~~f~ 186 (187)
T PF05728_consen 170 HSFQD--------FEEYLPQIIAFL 186 (187)
T ss_pred CCCcc--------HHHHHHHHHHhh
Confidence 99433 458888898886
No 77
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.12 E-value=1.1e-09 Score=85.79 Aligned_cols=159 Identities=14% Similarity=0.157 Sum_probs=87.8
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccc-cchhhhhHhhh
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGY-NLLNLVDHCHN 83 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 83 (224)
...+++|+.+... +|.+||+++|.|+||++|..+|..+ ..++++++...+.. ++..-......
T Consensus 245 ~~aVLd~L~~~p~---VD~~RV~~~G~SfGGy~AvRlA~le-------------~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 245 HQAVLDYLASRPW---VDHTRVGAWGFSFGGYYAVRLAALE-------------DPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp HHHHHHHHHHSTT---EEEEEEEEEEETHHHHHHHHHHHHT-------------TTT-SEEEEES---SCGGH-HHHHTT
T ss_pred HHHHHHHHhcCCc---cChhheEEEEeccchHHHHHHHHhc-------------ccceeeEeeeCchHhhhhccHHHHhc
Confidence 3578899988654 8889999999999999999998654 47899999888754 22221122111
Q ss_pred cc-hhHHHHHhhccCCCC-CCCCCc---cccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEE
Q 027370 84 RG-LYRSIFLSIMEGEES-LPVFSP---AVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELV 158 (224)
Q Consensus 84 ~~-~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~ 158 (224)
.. .+...+....+.... ...+.. .......-+-...+..+|+|.+.|++|+++|.+.+..++.. +.+.+..
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~----s~~gk~~ 384 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES----STDGKAL 384 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT----BTT-EEE
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc----CCCCcee
Confidence 11 122222221111100 000000 00000000000123446999999999999999988877653 4555666
Q ss_pred EcCCCC-CchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 159 LYPGKS-HTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 159 ~~~~~~-H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
.++... |. ..++.+..+.+||++.+
T Consensus 385 ~~~~~~~~~----------gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 385 RIPSKPLHM----------GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp EE-SSSHHH----------HHHHHHHHHHHHHHHHH
T ss_pred ecCCCcccc----------chHHHHHHHHHHHHHhc
Confidence 665443 65 25689999999998763
No 78
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.11 E-value=2.3e-10 Score=84.31 Aligned_cols=56 Identities=23% Similarity=0.447 Sum_probs=44.3
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHH
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHI 185 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i 185 (224)
.+..|+++++|++|.++|.+.+..+.+.+ ++.++++++++||...+.+ .+++.+.|
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~GH~~~~~~------~~~~~~~i 228 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLI----PNSQLVLIEGSGHFAFLEG------PDEFNEII 228 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHS----TTEEEEEETTCCSTHHHHS------HHHHHHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhc----CCCEEEECCCCChHHHhcC------HHhhhhhh
Confidence 46789999999999999999888877665 5689999999999954443 44555444
No 79
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.11 E-value=3.6e-10 Score=85.46 Aligned_cols=62 Identities=16% Similarity=0.369 Sum_probs=45.6
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
..+|+++++|++|-+ ....+.+..+.+ ....+++++++++||. ++.. ..+.+.+.|.+++++
T Consensus 302 ~~~pv~fiyG~~dWm-D~~~g~~~~~~~--~~~~~~~~~v~~aGHh-vylD-----np~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 302 KDVPVTFIYGDRDWM-DKNAGLEVTKSL--MKEYVEIIIVPGAGHH-VYLD-----NPEFFNQIVLEECDK 363 (365)
T ss_pred cCCCEEEEecCcccc-cchhHHHHHHHh--hcccceEEEecCCCce-eecC-----CHHHHHHHHHHHHhc
Confidence 348999999999954 344556555554 2346899999999999 4444 367889999988875
No 80
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.09 E-value=5.3e-09 Score=75.64 Aligned_cols=61 Identities=20% Similarity=0.267 Sum_probs=45.5
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
...+|+.++.|++|..|..++...+.+.. +...++++++ +||+++..+ .+++.+.+.+.+.
T Consensus 174 pl~~pi~~~~G~~D~~vs~~~~~~W~~~t---~~~f~l~~fd-GgHFfl~~~------~~~v~~~i~~~l~ 234 (244)
T COG3208 174 PLACPIHAFGGEKDHEVSRDELGAWREHT---KGDFTLRVFD-GGHFFLNQQ------REEVLARLEQHLA 234 (244)
T ss_pred CcCcceEEeccCcchhccHHHHHHHHHhh---cCCceEEEec-Ccceehhhh------HHHHHHHHHHHhh
Confidence 35589999999999999998888888775 4578999998 589954422 4455555555554
No 81
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.09 E-value=1.6e-09 Score=85.75 Aligned_cols=60 Identities=18% Similarity=0.246 Sum_probs=49.1
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
.+.|+++++|+.|.+++.+.++.+++. .+.++.++++++|... .+..+++.+.|.+|+.+
T Consensus 324 i~vPvLiI~G~~D~~v~~~~~~~~a~~-----~~a~l~vIp~aGH~~~------~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 324 WKTPITVCWGLRDRWLNYDGVEDFCKS-----SQHKLIELPMAGHHVQ------EDCGEELGGIISGILSK 383 (383)
T ss_pred CCCCEEEEeeCCCCCcCHHHHHHHHHh-----cCCeEEEECCCCCCcc------hhCHHHHHHHHHHHhhC
Confidence 578999999999999998877777764 2678999999999832 23478999999999863
No 82
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.06 E-value=6.5e-10 Score=82.10 Aligned_cols=103 Identities=22% Similarity=0.326 Sum_probs=78.6
Q ss_pred HHHHHHH-hcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcc
Q 027370 7 QGISFVF-NNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG 85 (224)
Q Consensus 7 ~al~~l~-~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (224)
..++-+. ...+.+++|.+||+++|.|+||..+..++... ++.+.+.+.++|.-+........
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf-------------PdfFAaa~~iaG~~d~v~lv~~l---- 313 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF-------------PDFFAAAVPIAGGGDRVYLVRTL---- 313 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC-------------chhhheeeeecCCCchhhhhhhh----
Confidence 3455555 34467899999999999999999999998886 56788888888854421111110
Q ss_pred hhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcC
Q 027370 86 LYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYP 161 (224)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~ 161 (224)
.+.|+.++|+.+|.++|.+.++-.++++++...++.+..+.
T Consensus 314 -----------------------------------k~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 314 -----------------------------------KKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred -----------------------------------ccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 12699999999999999999999999998777777766665
No 83
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.04 E-value=1.3e-09 Score=100.19 Aligned_cols=70 Identities=14% Similarity=0.148 Sum_probs=52.8
Q ss_pred ccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcC--------CccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHH
Q 027370 117 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVG--------AKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAV 188 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~--------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~f 188 (224)
.+....+|+|+++|++|..++ +.+.++.+.+.... ..+++++++++||...+. ..+++.+.|.+|
T Consensus 1563 ~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE------~Pe~f~~~I~~F 1635 (1655)
T PLN02980 1563 DLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLE------NPLPVIRALRKF 1635 (1655)
T ss_pred HHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHH------CHHHHHHHHHHH
Confidence 345667899999999998765 66777777664320 126899999999994332 367999999999
Q ss_pred HHhhC
Q 027370 189 IHAND 193 (224)
Q Consensus 189 l~~~~ 193 (224)
|.+..
T Consensus 1636 L~~~~ 1640 (1655)
T PLN02980 1636 LTRLH 1640 (1655)
T ss_pred HHhcc
Confidence 99854
No 84
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.03 E-value=2.1e-09 Score=75.44 Aligned_cols=115 Identities=19% Similarity=0.132 Sum_probs=71.6
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhc
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNR 84 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (224)
...-++.+.+.+.. + .++++|+|||.|+..++.++.... ..++++++..++.......
T Consensus 39 ~~~W~~~l~~~i~~--~-~~~~ilVaHSLGc~~~l~~l~~~~------------~~~v~g~lLVAp~~~~~~~------- 96 (171)
T PF06821_consen 39 LDEWVQALDQAIDA--I-DEPTILVAHSLGCLTALRWLAEQS------------QKKVAGALLVAPFDPDDPE------- 96 (171)
T ss_dssp HHHHHHHHHHCCHC----TTTEEEEEETHHHHHHHHHHHHTC------------CSSEEEEEEES--SCGCHH-------
T ss_pred HHHHHHHHHHHHhh--c-CCCeEEEEeCHHHHHHHHHHhhcc------------cccccEEEEEcCCCccccc-------
Confidence 44455555555442 3 356999999999999999985211 4689999999985321000
Q ss_pred chhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCC
Q 027370 85 GLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKS 164 (224)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~ 164 (224)
........+.+.... ....|.+++.+++|+.||.+.+..+++++ +++++.++++|
T Consensus 97 -----------~~~~~~~~f~~~p~~---------~l~~~~~viaS~nDp~vp~~~a~~~A~~l-----~a~~~~~~~~G 151 (171)
T PF06821_consen 97 -----------PFPPELDGFTPLPRD---------PLPFPSIVIASDNDPYVPFERAQRLAQRL-----GAELIILGGGG 151 (171)
T ss_dssp -----------CCTCGGCCCTTSHCC---------HHHCCEEEEEETTBSSS-HHHHHHHHHHH-----T-EEEEETS-T
T ss_pred -----------chhhhccccccCccc---------ccCCCeEEEEcCCCCccCHHHHHHHHHHc-----CCCeEECCCCC
Confidence 000001111111000 01146799999999999999999999987 46899999999
Q ss_pred Cc
Q 027370 165 HT 166 (224)
Q Consensus 165 H~ 166 (224)
|+
T Consensus 152 Hf 153 (171)
T PF06821_consen 152 HF 153 (171)
T ss_dssp TS
T ss_pred Cc
Confidence 98
No 85
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.03 E-value=7.9e-10 Score=83.05 Aligned_cols=178 Identities=16% Similarity=0.243 Sum_probs=57.0
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|+.++|+|++..... ....++|+|+|||-|..-++.++........ ...+.+.|..++..|........
T Consensus 87 ~~eI~~~v~ylr~~~~g-~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~--------~~~VdG~ILQApVSDREa~~~~~ 157 (303)
T PF08538_consen 87 VEEIAQLVEYLRSEKGG-HFGREKIVLMGHSTGCQDVLHYLSSPNPSPS--------RPPVDGAILQAPVSDREAILNFL 157 (303)
T ss_dssp HHHHHHHHHHHHHHS-------S-EEEEEECCHHHHHHHHHHH-TT-----------CCCEEEEEEEEE---TTSTTTSH
T ss_pred HHHHHHHHHHHHHhhcc-ccCCccEEEEecCCCcHHHHHHHhccCcccc--------ccceEEEEEeCCCCChhHhhhcc
Confidence 47889999999886310 0145699999999999999999887543211 36789999998877665443322
Q ss_pred hhcchhHHHHH---hh-cc--CCCCC-CCC-------Cccc---cc----------------cCCCc-cccCCCCCCEEE
Q 027370 82 HNRGLYRSIFL---SI-ME--GEESL-PVF-------SPAV---RI----------------KDPSI-RDASSLLPPIIL 127 (224)
Q Consensus 82 ~~~~~~~~~~~---~~-~~--~~~~~-~~~-------~~~~---~~----------------~~~~~-~~~~~~~~P~li 127 (224)
..+..+...+. .. .. .+... ... .|.. .. .+... ...-.+..|+|+
T Consensus 158 ~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLv 237 (303)
T PF08538_consen 158 GEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLV 237 (303)
T ss_dssp HH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEE
T ss_pred cchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEE
Confidence 21111111100 00 00 00000 000 0000 00 00000 122235569999
Q ss_pred EeeCCCCccCch-HHHHHHHHHHHcCC----ccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 128 FHGTSDYSIPSD-ASMAFADALQKVGA----KPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 128 i~g~~D~~vp~~-~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
+.+++|+.||.. .-+.+.++++.... ...--++||++|.. .+....+..+.+.+.|..||+
T Consensus 238 l~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~--~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 238 LYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNV--SGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp EEE--TT-------------------------------------------------------------
T ss_pred EecCCCceecccccccccccccccccccccccccccccccccccc--cccccccccccccccccccCC
Confidence 999999999973 44567777654322 23355899999992 111111123467888888874
No 86
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.02 E-value=8.5e-10 Score=78.30 Aligned_cols=132 Identities=14% Similarity=0.257 Sum_probs=92.6
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
.+|+...++||..+ .++.+|+++|..+||.++..+.... ..+.+.+...|....
T Consensus 103 ~~~i~~v~k~lk~~-----g~~kkIGv~GfCwGak~vv~~~~~~--------------~~f~a~v~~hps~~d------- 156 (242)
T KOG3043|consen 103 WKDITAVVKWLKNH-----GDSKKIGVVGFCWGAKVVVTLSAKD--------------PEFDAGVSFHPSFVD------- 156 (242)
T ss_pred hhHHHHHHHHHHHc-----CCcceeeEEEEeecceEEEEeeccc--------------hhheeeeEecCCcCC-------
Confidence 46889999999854 4467999999999998876554442 245555555441100
Q ss_pred hhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcC-CccEEEEc
Q 027370 82 HNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVG-AKPELVLY 160 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~-~~~~~~~~ 160 (224)
.......++|++++.|+.|.++|+....++-+.++++. ...++++|
T Consensus 157 ---------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f 203 (242)
T KOG3043|consen 157 ---------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTF 203 (242)
T ss_pred ---------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEc
Confidence 01222345899999999999999998998888887543 23579999
Q ss_pred CCCCCchhh-----hcCCCCCCccHHHHHHHHHHHhh
Q 027370 161 PGKSHTDLF-----LQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 161 ~~~~H~~~~-----~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+|.+|+|.. .....+...++..+.+++|+++.
T Consensus 204 ~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 204 SGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred CCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 999999753 11122234577888899999875
No 87
>PLN00021 chlorophyllase
Probab=99.01 E-value=7e-09 Score=79.93 Aligned_cols=156 Identities=15% Similarity=0.139 Sum_probs=90.4
Q ss_pred cchHHHHHHHHHhcccc-----cCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh
Q 027370 2 VKDVSQGISFVFNNIAD-----YGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN 76 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~-----~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 76 (224)
++|+.++++|+.+.... ...+.++++++||||||.+++.++........ ...+++++.+.+......
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~--------~~~v~ali~ldPv~g~~~ 170 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSL--------PLKFSALIGLDPVDGTSK 170 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccccc--------ccceeeEEeecccccccc
Confidence 35677888999865432 23567899999999999999999987542210 134566665554221100
Q ss_pred hhhHhhhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCC-----ccC----c-hHHHHHHH
Q 027370 77 LVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDY-----SIP----S-DASMAFAD 146 (224)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~-----~vp----~-~~~~~~~~ 146 (224)
. .. .......+. ........|+||+.+..|. .+| . .+..+|++
T Consensus 171 ~--~~---------------~~p~il~~~----------~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~ 223 (313)
T PLN00021 171 G--KQ---------------TPPPVLTYA----------PHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFN 223 (313)
T ss_pred c--cC---------------CCCcccccC----------cccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHH
Confidence 0 00 000000000 1111245799999999763 222 4 34466777
Q ss_pred HHHHcCCccEEEEcCCCCCchhhhcCC-----------------CCCCccHHHHHHHHHHHhhChh
Q 027370 147 ALQKVGAKPELVLYPGKSHTDLFLQDP-----------------LRGGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~H~~~~~~~~-----------------~~~~~~~~~~~i~~fl~~~~~~ 195 (224)
.+ ..++.+.+.++++|+.+..... .....+.+...+..||...+..
T Consensus 224 ~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 224 EC---KAPAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred hc---CCCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 65 4678999999999996543320 1111234455678888887543
No 88
>PLN02872 triacylglycerol lipase
Probab=98.99 E-value=7.8e-09 Score=82.11 Aligned_cols=71 Identities=24% Similarity=0.357 Sum_probs=55.1
Q ss_pred ccCCC--CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 117 DASSL--LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 117 ~~~~~--~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
.+..+ ..|+++++|++|.+++......+.+.+. ..++++.+++.+|...++... ..+++.+.|.+|+++..
T Consensus 318 ~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp---~~~~l~~l~~~gH~dfi~~~e---ape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 318 DLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELP---SKPELLYLENYGHIDFLLSTS---AKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCC---CccEEEEcCCCCCHHHHhCcc---hHHHHHHHHHHHHHHhh
Confidence 34444 4699999999999999988888888763 235888999999985544322 47789999999998654
No 89
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.99 E-value=1.5e-08 Score=76.96 Aligned_cols=59 Identities=14% Similarity=0.182 Sum_probs=45.9
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
.+|+++|.|++|..+|++..+.+++.+ ...+++.++ +||.-.+ +..+++.+.|.++...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~----~~~~~~~l~-~gH~p~l------s~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRW----PPSQVYELE-SDHSPFF------STPFLLFGLLIKAAAS 269 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhC----CccEEEEEC-CCCCccc------cCHHHHHHHHHHHHHH
Confidence 579999999999999999999888875 344788886 8998322 3467888888776554
No 90
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.96 E-value=1.6e-09 Score=79.07 Aligned_cols=158 Identities=16% Similarity=0.143 Sum_probs=91.8
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
+.|+..|++-+.+..+ +|.+||.+.|.|+||.+++.++.-. ++++......+.....+..-..
T Consensus 157 ~~D~~~ave~~~sl~~---vde~Ri~v~G~SqGGglalaaaal~--------------~rik~~~~~~Pfl~df~r~i~~ 219 (321)
T COG3458 157 FLDAVRAVEILASLDE---VDEERIGVTGGSQGGGLALAAAALD--------------PRIKAVVADYPFLSDFPRAIEL 219 (321)
T ss_pred hHHHHHHHHHHhccCc---cchhheEEeccccCchhhhhhhhcC--------------hhhhcccccccccccchhheee
Confidence 4688888888877544 8889999999999999999887663 4444444444322111111000
Q ss_pred hhcchhH---HHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEE
Q 027370 82 HNRGLYR---SIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELV 158 (224)
Q Consensus 82 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~ 158 (224)
.....+. +++... ... ....+..+... +..+...+++.|+|+..|-.|++||+.-.-+.++++ ...+++.
T Consensus 220 ~~~~~ydei~~y~k~h-~~~-e~~v~~TL~yf--D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l---~~~K~i~ 292 (321)
T COG3458 220 ATEGPYDEIQTYFKRH-DPK-EAEVFETLSYF--DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNAL---TTSKTIE 292 (321)
T ss_pred cccCcHHHHHHHHHhc-Cch-HHHHHHHHhhh--hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcc---cCCceEE
Confidence 1111111 111110 000 00001111111 111334457789999999999999998777777777 3567889
Q ss_pred EcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 159 LYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 159 ~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+|+--+|... ..-..+++..|+...
T Consensus 293 iy~~~aHe~~---------p~~~~~~~~~~l~~l 317 (321)
T COG3458 293 IYPYFAHEGG---------PGFQSRQQVHFLKIL 317 (321)
T ss_pred EeeccccccC---------cchhHHHHHHHHHhh
Confidence 9988889821 223345577777653
No 91
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.93 E-value=9.4e-09 Score=77.52 Aligned_cols=170 Identities=14% Similarity=0.182 Sum_probs=93.7
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCH 82 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (224)
+|+...++|+++... +.++..+|.|+||++.+.+....... ..+.+.+..+-+.++........
T Consensus 132 ~D~~~~l~~l~~~~~-----~r~~~avG~SLGgnmLa~ylgeeg~d-----------~~~~aa~~vs~P~Dl~~~~~~l~ 195 (345)
T COG0429 132 EDIRFFLDWLKARFP-----PRPLYAVGFSLGGNMLANYLGEEGDD-----------LPLDAAVAVSAPFDLEACAYRLD 195 (345)
T ss_pred hHHHHHHHHHHHhCC-----CCceEEEEecccHHHHHHHHHhhccC-----------cccceeeeeeCHHHHHHHHHHhc
Confidence 689999999988542 46899999999996655555543221 23344444444444432222211
Q ss_pred hc---chhHHHHHhhc-----------------------cCCCCCCCCCc-------------cccccCCCccccCCCCC
Q 027370 83 NR---GLYRSIFLSIM-----------------------EGEESLPVFSP-------------AVRIKDPSIRDASSLLP 123 (224)
Q Consensus 83 ~~---~~~~~~~~~~~-----------------------~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 123 (224)
.. .++...+.... ........++. +.+...+....+..+..
T Consensus 196 ~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~ 275 (345)
T COG0429 196 SGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRK 275 (345)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccccccccc
Confidence 11 11111111100 00011111111 12223345566777889
Q ss_pred CEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 124 PIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 124 P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
|+||+|+.+|++++.+..-..... .++++.+...+.+||.-.+.+..... ..=..+.+.+|+...
T Consensus 276 PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~-~~W~~~ri~~~l~~~ 340 (345)
T COG0429 276 PTLIINAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHP-QMWLEQRILDWLDPF 340 (345)
T ss_pred ceEEEecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccc-hhhHHHHHHHHHHHH
Confidence 999999999999987544433332 36889999999999994333222111 112355677777654
No 92
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.92 E-value=4.2e-08 Score=74.05 Aligned_cols=67 Identities=15% Similarity=0.243 Sum_probs=49.6
Q ss_pred ccCCCCCCEEEEeeCCCCccCch-HHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 117 DASSLLPPIILFHGTSDYSIPSD-ASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
...+++.|+++++|+.|.+.+.. +...+.+.+. .-.+..+++|+||+ ...+..+++.+.+.+|+++.
T Consensus 253 ~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp---~l~~~vv~~~~gH~------vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 253 ALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVP---RLTERVVIEGIGHF------VQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccccceEEEEecCcccccchhHHHHHHHhhc---cccceEEecCCccc------ccccCHHHHHHHHHHHHHhh
Confidence 34456789999999999998876 4444444432 23478999999999 22234789999999999874
No 93
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.90 E-value=2.6e-08 Score=77.69 Aligned_cols=170 Identities=14% Similarity=0.219 Sum_probs=100.6
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccch---hhhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLL---NLVD 79 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~ 79 (224)
+|+..++++|+++.. ..+++.+|.||||++...+......+ ..+.+.+.++-++|.. ....
T Consensus 182 ~Dl~~~v~~i~~~~P-----~a~l~avG~S~Gg~iL~nYLGE~g~~-----------~~l~~a~~v~~Pwd~~~~~~~~~ 245 (409)
T KOG1838|consen 182 EDLREVVNHIKKRYP-----QAPLFAVGFSMGGNILTNYLGEEGDN-----------TPLIAAVAVCNPWDLLAASRSIE 245 (409)
T ss_pred HHHHHHHHHHHHhCC-----CCceEEEEecchHHHHHHHhhhccCC-----------CCceeEEEEeccchhhhhhhHHh
Confidence 699999999998764 24799999999999999998875433 2444555555446532 1111
Q ss_pred HhhhcchhHHHHHhhc---------------------cCCCCCCCCC-------------ccccccCCCccccCCCCCCE
Q 027370 80 HCHNRGLYRSIFLSIM---------------------EGEESLPVFS-------------PAVRIKDPSIRDASSLLPPI 125 (224)
Q Consensus 80 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~P~ 125 (224)
.......+.+.+.... ...+..+.++ ...+...+..+.+..+..|+
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~ 325 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPL 325 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccE
Confidence 1111111111110000 0001111111 11223334556667788999
Q ss_pred EEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHH-HHHHHHhhC
Q 027370 126 ILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDH-IIAVIHAND 193 (224)
Q Consensus 126 lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~-i~~fl~~~~ 193 (224)
|++++.+|+++|.+ +.-.. .++ .++++-+.+-..+||.-.+.+ +.+....+++. +.+|+.+-.
T Consensus 326 L~ina~DDPv~p~~-~ip~~-~~~-~np~v~l~~T~~GGHlgfleg--~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 326 LCINAADDPVVPEE-AIPID-DIK-SNPNVLLVITSHGGHLGFLEG--LWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred EEEecCCCCCCCcc-cCCHH-HHh-cCCcEEEEEeCCCceeeeecc--CCCccchhHHHHHHHHHHHHH
Confidence 99999999999985 22221 122 357888888899999954444 22245677777 888887753
No 94
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.88 E-value=1.3e-09 Score=87.64 Aligned_cols=165 Identities=16% Similarity=0.119 Sum_probs=105.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|..++.++|.++.- ..|+++.+.|.|-||.++...+.+. ++.+.+++...+..|+..+-...
T Consensus 481 fdDf~AVaedLi~rgi---tspe~lgi~GgSNGGLLvg~alTQr-------------PelfgA~v~evPllDMlRYh~l~ 544 (648)
T COG1505 481 FDDFIAVAEDLIKRGI---TSPEKLGIQGGSNGGLLVGAALTQR-------------PELFGAAVCEVPLLDMLRYHLLT 544 (648)
T ss_pred hHHHHHHHHHHHHhCC---CCHHHhhhccCCCCceEEEeeeccC-------------hhhhCceeeccchhhhhhhcccc
Confidence 5788899999887642 4678999999999999988766664 56677777777766665443332
Q ss_pred hhcchhHHHHHhhc-cCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEc
Q 027370 82 HNRGLYRSIFLSIM-EGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLY 160 (224)
Q Consensus 82 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 160 (224)
....+...+..... ........++|....... ...||+||..+..|..|-+.+++.|+.+|++.+.++-+++-
T Consensus 545 aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g------~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~ 618 (648)
T COG1505 545 AGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPG------QKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREE 618 (648)
T ss_pred cchhhHhhcCCCCCHHHHHHHHhcCchhcCCcc------ccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEee
Confidence 22222111110000 000112223443322221 24589999999999999999999999999999988888888
Q ss_pred CCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 161 PGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 161 ~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
-++||+ -..+..+ ..+-...+..||.+.
T Consensus 619 t~gGH~---g~~~~~~-~A~~~a~~~afl~r~ 646 (648)
T COG1505 619 TKGGHG---GAAPTAE-IARELADLLAFLLRT 646 (648)
T ss_pred cCCccc---CCCChHH-HHHHHHHHHHHHHHh
Confidence 889998 2222211 123334455666553
No 95
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.87 E-value=2.3e-08 Score=88.66 Aligned_cols=71 Identities=11% Similarity=0.125 Sum_probs=57.6
Q ss_pred ccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEE-EEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 117 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPEL-VLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
.+..+.+|+|+++|+.|.++|++.++.+.+.+ .+.++ .+++++||...+.+.. ..+++...+.+||.++..
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i----~~a~~~~~~~~~GH~g~~~g~~---a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAA----PNAEVYESLIRAGHFGLVVGSR---AAQQTWPTVADWVKWLEG 363 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC----CCCeEEEEeCCCCCEeeeechh---hhhhhChHHHHHHHHhcc
Confidence 35567789999999999999999999887765 45566 5778999997665544 367899999999999864
No 96
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.87 E-value=1.4e-08 Score=77.48 Aligned_cols=66 Identities=23% Similarity=0.318 Sum_probs=55.4
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcC-CccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhChh
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVG-AKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 195 (224)
...|++|.||..|.+||+..+.++++++-+.| .+++++.+++.+|.... ..-......||.++...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~---------~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA---------FASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh---------hcCcHHHHHHHHHHHCC
Confidence 35699999999999999999999999998889 79999999999998322 13446778999988653
No 97
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.82 E-value=1.8e-07 Score=74.86 Aligned_cols=123 Identities=20% Similarity=0.177 Sum_probs=77.5
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcch
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGL 86 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (224)
+.+-||.++.. ...++++.+|+|+||||..|+.+++++ ++.+..++..+|.+-...... .....
T Consensus 272 eLlP~I~~~y~-~~~d~~~~~IaG~S~GGl~AL~~al~~-------------Pd~Fg~v~s~Sgs~ww~~~~~--~~~~~ 335 (411)
T PRK10439 272 ELLPQVRAIAP-FSDDADRTVVAGQSFGGLAALYAGLHW-------------PERFGCVLSQSGSFWWPHRGG--QQEGV 335 (411)
T ss_pred HHHHHHHHhCC-CCCCccceEEEEEChHHHHHHHHHHhC-------------cccccEEEEeccceecCCccC--CchhH
Confidence 34455555321 234677899999999999999999997 567888888887431110000 00000
Q ss_pred hHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCc
Q 027370 87 YRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 166 (224)
+...+ .. .........++|-+|+.|..+ .+.++++++.+++.|.++++.+++| ||.
T Consensus 336 l~~~l----~~------------------~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd 391 (411)
T PRK10439 336 LLEQL----KA------------------GEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHD 391 (411)
T ss_pred HHHHH----Hh------------------cccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcC
Confidence 00000 00 000011136888899988543 4778999999999999999999997 798
Q ss_pred hhh
Q 027370 167 DLF 169 (224)
Q Consensus 167 ~~~ 169 (224)
+..
T Consensus 392 ~~~ 394 (411)
T PRK10439 392 ALC 394 (411)
T ss_pred HHH
Confidence 544
No 98
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.81 E-value=6e-08 Score=73.22 Aligned_cols=63 Identities=11% Similarity=0.262 Sum_probs=51.6
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
....||++++|.++..|+.++-.++.+.. +++++++++++||+ +... ..+++++.|.+|+..+
T Consensus 251 ~~~~pvlfi~g~~S~fv~~~~~~~~~~~f----p~~e~~~ld~aGHw-Vh~E-----~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 251 PYTGPVLFIKGLQSKFVPDEHYPRMEKIF----PNVEVHELDEAGHW-VHLE-----KPEEFIESISEFLEEP 313 (315)
T ss_pred ccccceeEEecCCCCCcChhHHHHHHHhc----cchheeecccCCce-eecC-----CHHHHHHHHHHHhccc
Confidence 34569999999999999988777776654 67899999999999 3322 4689999999999875
No 99
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.81 E-value=4.6e-08 Score=71.45 Aligned_cols=118 Identities=18% Similarity=0.209 Sum_probs=67.7
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCH 82 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (224)
.++.++++++.+...+.|- -.+|+|+|+||.+|+.++.......... ....++..+.++|........
T Consensus 84 ~~~~~sl~~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~-----~~~~~kf~V~~sg~~p~~~~~---- 151 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP---FDGVLGFSQGAALAALLLALQQRGRPDG-----AHPPFKFAVFISGFPPPDPDY---- 151 (212)
T ss_dssp ---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST-------T----SEEEEES----EEE-G----
T ss_pred cCHHHHHHHHHHHHHhcCC---eEEEEeecHHHHHHHHHHHHHHhhcccc-----cCCCceEEEEEcccCCCchhh----
Confidence 4567788888777654331 4789999999999998886543322110 135677888888754322110
Q ss_pred hcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCC
Q 027370 83 NRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPG 162 (224)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~ 162 (224)
.... ....+..|+|.++|++|.+++.+.++.+++.+... .+++..+
T Consensus 152 ----------------------~~~~--------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~- 197 (212)
T PF03959_consen 152 ----------------------QELY--------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHD- 197 (212)
T ss_dssp ----------------------TTTT----------TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEES-
T ss_pred ----------------------hhhh--------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEEC-
Confidence 0000 01123479999999999999999999999998643 5777776
Q ss_pred CCCc
Q 027370 163 KSHT 166 (224)
Q Consensus 163 ~~H~ 166 (224)
+||.
T Consensus 198 gGH~ 201 (212)
T PF03959_consen 198 GGHH 201 (212)
T ss_dssp SSSS
T ss_pred CCCc
Confidence 5777
No 100
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.81 E-value=1.6e-08 Score=73.55 Aligned_cols=117 Identities=20% Similarity=0.237 Sum_probs=66.8
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhc
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNR 84 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (224)
+...++++.+ ++++|++||++.|+|+||.++..++... ++.+.++...+|..- .......
T Consensus 81 i~~lv~~v~~---~~~iD~~RVyv~G~S~Gg~ma~~la~~~-------------pd~faa~a~~sG~~~-~~a~~~~--- 140 (220)
T PF10503_consen 81 IAALVDYVAA---RYNIDPSRVYVTGLSNGGMMANVLACAY-------------PDLFAAVAVVSGVPY-GCAASGA--- 140 (220)
T ss_pred HHHHHHhHhh---hcccCCCceeeEEECHHHHHHHHHHHhC-------------CccceEEEeeccccc-ccccCcc---
Confidence 3444555544 5679999999999999999999998876 466777666666321 1100000
Q ss_pred chhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHH
Q 027370 85 GLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQK 150 (224)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~ 150 (224)
.... ........ .+............ ....|++|+||+.|..|.+..+.++.+++..
T Consensus 141 ~a~~----~m~~g~~~----~p~~~~~a~~~~g~-~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 141 SALS----AMRSGPRP----APAAAWGARSDAGA-YPGYPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred cHHH----HhhCCCCC----ChHHHHHhhhhccC-CCCCCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 0000 00000000 00000000000000 0124899999999999999999988888753
No 101
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.80 E-value=1.6e-07 Score=77.12 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=40.5
Q ss_pred ccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhh
Q 027370 117 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFL 170 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 170 (224)
.+..+++|+|+++|++|.++|.+.+..+.+.+ .+.+..+++++||...+.
T Consensus 410 dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i----~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 410 DLSKVKVPVYIIATREDHIAPWQSAYRGAALL----GGPKTFVLGESGHIAGVV 459 (532)
T ss_pred chhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC----CCCEEEEECCCCCchHhh
Confidence 45567899999999999999999888887765 356778899999995443
No 102
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.78 E-value=2.3e-07 Score=63.74 Aligned_cols=123 Identities=12% Similarity=0.052 Sum_probs=77.9
Q ss_pred CCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCCCC
Q 027370 21 GDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEES 100 (224)
Q Consensus 21 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (224)
..++.++|++||.|+..++.++.+. ...++|.+..+++-.-.+.. ....
T Consensus 56 a~~~~~vlVAHSLGc~~v~h~~~~~-------------~~~V~GalLVAppd~~~~~~------------------~~~~ 104 (181)
T COG3545 56 AAEGPVVLVAHSLGCATVAHWAEHI-------------QRQVAGALLVAPPDVSRPEI------------------RPKH 104 (181)
T ss_pred ccCCCeEEEEecccHHHHHHHHHhh-------------hhccceEEEecCCCcccccc------------------chhh
Confidence 3345699999999999999988774 24688888888732111100 0000
Q ss_pred CCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccH
Q 027370 101 LPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDD 180 (224)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 180 (224)
.-.+.+...... --|.+++.+++|+.+++++++.+++.+ ...++....+||.-...+ .+...+
T Consensus 105 ~~tf~~~p~~~l---------pfps~vvaSrnDp~~~~~~a~~~a~~w-----gs~lv~~g~~GHiN~~sG---~g~wpe 167 (181)
T COG3545 105 LMTFDPIPREPL---------PFPSVVVASRNDPYVSYEHAEDLANAW-----GSALVDVGEGGHINAESG---FGPWPE 167 (181)
T ss_pred ccccCCCccccC---------CCceeEEEecCCCCCCHHHHHHHHHhc-----cHhheecccccccchhhc---CCCcHH
Confidence 111111111111 138999999999999999999999986 347788888999832211 123456
Q ss_pred HHHHHHHHHHh
Q 027370 181 LFDHIIAVIHA 191 (224)
Q Consensus 181 ~~~~i~~fl~~ 191 (224)
....+.+|+.+
T Consensus 168 g~~~l~~~~s~ 178 (181)
T COG3545 168 GYALLAQLLSR 178 (181)
T ss_pred HHHHHHHHhhh
Confidence 66666666654
No 103
>PRK05855 short chain dehydrogenase; Validated
Probab=98.74 E-value=5.4e-08 Score=81.71 Aligned_cols=62 Identities=11% Similarity=-0.041 Sum_probs=48.4
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
..+|+++++|++|.++|......+.+.+ .+.++++++ +||+..+. ..+++.+.+.+|+.+..
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~-~gH~~~~e------~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWV----PRLWRREIK-AGHWLPMS------HPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccC----CcceEEEcc-CCCcchhh------ChhHHHHHHHHHHHhcc
Confidence 5789999999999999998888776554 456777776 68984332 36789999999998753
No 104
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.74 E-value=2.5e-07 Score=70.92 Aligned_cols=55 Identities=18% Similarity=0.399 Sum_probs=41.0
Q ss_pred CEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHH
Q 027370 124 PIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAV 188 (224)
Q Consensus 124 P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~f 188 (224)
.+.++.+++|..||..+...+.+.. +.+++++++| ||...++.. .+.+.+.|.+=
T Consensus 291 ~ii~V~A~~DaYVPr~~v~~Lq~~W----PGsEvR~l~g-GHVsA~L~~-----q~~fR~AI~Da 345 (348)
T PF09752_consen 291 AIIFVAAKNDAYVPRHGVLSLQEIW----PGSEVRYLPG-GHVSAYLLH-----QEAFRQAIYDA 345 (348)
T ss_pred cEEEEEecCceEechhhcchHHHhC----CCCeEEEecC-CcEEEeeec-----hHHHHHHHHHH
Confidence 5789999999999998888777765 6789999987 999655431 34555555543
No 105
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.71 E-value=3.7e-07 Score=71.01 Aligned_cols=149 Identities=17% Similarity=0.167 Sum_probs=82.8
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhh----
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLV---- 78 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 78 (224)
.++.+.++++.+.. | .++|.|+|.|+||++++.++..-.... . ..-.+..+.++++.++....
T Consensus 179 ~qlv~~Y~~Lv~~~---G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~--~------~~~Pk~~iLISPWv~l~~~~~~~~ 245 (374)
T PF10340_consen 179 RQLVATYDYLVESE---G--NKNIILMGDSAGGNLALSFLQYLKKPN--K------LPYPKSAILISPWVNLVPQDSQEG 245 (374)
T ss_pred HHHHHHHHHHHhcc---C--CCeEEEEecCccHHHHHHHHHHHhhcC--C------CCCCceeEEECCCcCCcCCCCCCC
Confidence 45667777777421 2 358999999999999998876532211 1 12235778888877665211
Q ss_pred hHhh---hcch-----hHHHHHhhccC--CCCCCCCCcc---cc-ccCCCccccCCCCCCEEEEeeCCCCccCchHHHHH
Q 027370 79 DHCH---NRGL-----YRSIFLSIMEG--EESLPVFSPA---VR-IKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAF 144 (224)
Q Consensus 79 ~~~~---~~~~-----~~~~~~~~~~~--~~~~~~~~~~---~~-~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~ 144 (224)
.... .... ...+...+..+ ........+. .. .+...+... .....++|+.|+++ +..++.++|
T Consensus 246 ~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I-~~~~~vfVi~Ge~E--vfrddI~~~ 322 (374)
T PF10340_consen 246 SSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDI-LKKYSVFVIYGEDE--VFRDDILEW 322 (374)
T ss_pred ccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHh-ccCCcEEEEECCcc--ccHHHHHHH
Confidence 0000 0000 11111111111 0001111111 11 111222222 22358999999999 559999999
Q ss_pred HHHHHHcCC-----ccEEEEcCCCCCch
Q 027370 145 ADALQKVGA-----KPELVLYPGKSHTD 167 (224)
Q Consensus 145 ~~~l~~~~~-----~~~~~~~~~~~H~~ 167 (224)
++.+...+. ...+.+.+++.|..
T Consensus 323 ~~~~~~~~~~~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 323 AKKLNDVKPNKFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred HHHHhhcCccccCCcceEEEecCCcccc
Confidence 999975443 36888889999984
No 106
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.70 E-value=7.1e-08 Score=71.84 Aligned_cols=157 Identities=14% Similarity=0.168 Sum_probs=88.1
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhc
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNR 84 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (224)
+..++.+|.+ +|+++ ++-++||||||..+..++....... ..+.+..++.+.++++-..........
T Consensus 89 l~~vl~~L~~---~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~--------~~P~l~K~V~Ia~pfng~~~~~~~~~~ 155 (255)
T PF06028_consen 89 LKKVLKYLKK---KYHFK--KFNLVGHSMGGLSWTYYLENYGNDK--------NLPKLNKLVTIAGPFNGILGMNDDQNQ 155 (255)
T ss_dssp HHHHHHHHHH---CC--S--EEEEEEETHHHHHHHHHHHHCTTGT--------TS-EEEEEEEES--TTTTTCCSC-TTT
T ss_pred HHHHHHHHHH---hcCCC--EEeEEEECccHHHHHHHHHHhccCC--------CCcccceEEEeccccCccccccccchh
Confidence 3455555555 45565 8999999999999999988753321 135788899998877654221110000
Q ss_pred chhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeC------CCCccCchHHHHHHHHHHHcCCccEEE
Q 027370 85 GLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGT------SDYSIPSDASMAFADALQKVGAKPELV 158 (224)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~------~D~~vp~~~~~~~~~~l~~~~~~~~~~ 158 (224)
.. . .... ....++...........-......+|-|.|. .|..||..+++.+.--++......+-.
T Consensus 156 ~~-------~-~~~g-p~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~ 226 (255)
T PF06028_consen 156 ND-------L-NKNG-PKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEK 226 (255)
T ss_dssp T--------C-STT--BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEE
T ss_pred hh-------h-cccC-CcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEE
Confidence 00 0 0000 0000110000000000111223579999999 899999998888777666555666777
Q ss_pred EcCC--CCCchhhhcCCCCCCccHHHHHHHHHHH
Q 027370 159 LYPG--KSHTDLFLQDPLRGGKDDLFDHIIAVIH 190 (224)
Q Consensus 159 ~~~~--~~H~~~~~~~~~~~~~~~~~~~i~~fl~ 190 (224)
.+.| +.|.... +..++.+.|.+||-
T Consensus 227 ~v~G~~a~HS~Lh-------eN~~V~~~I~~FLw 253 (255)
T PF06028_consen 227 TVTGKDAQHSQLH-------ENPQVDKLIIQFLW 253 (255)
T ss_dssp EEESGGGSCCGGG-------CCHHHHHHHHHHHC
T ss_pred EEECCCCccccCC-------CCHHHHHHHHHHhc
Confidence 7765 6898322 25699999999984
No 107
>PRK04940 hypothetical protein; Provisional
Probab=98.67 E-value=7.2e-07 Score=62.40 Aligned_cols=54 Identities=13% Similarity=0.041 Sum_probs=41.8
Q ss_pred CEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 124 PIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 124 P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
..+++..+.|++++..++.+.+... .+..+.+|++|.+.- -++.+..|.+|+.+
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~GGdH~f~~--------fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEELHPY------YEIVWDEEQTHKFKN--------ISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHhccC------ceEEEECCCCCCCCC--------HHHHHHHHHHHHhc
Confidence 5689999999999888777665421 168899999999433 45899999999853
No 108
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.64 E-value=8.7e-07 Score=63.25 Aligned_cols=116 Identities=20% Similarity=0.178 Sum_probs=75.8
Q ss_pred EEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCCCCCCCCC
Q 027370 26 IYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFS 105 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (224)
=+|+|+|+|+.++..++...... ... ...+.++-.+.++|........+..
T Consensus 106 DGllGFSQGA~laa~l~~~~~~~---~~~--~~~P~~kF~v~~SGf~~~~~~~~~~------------------------ 156 (230)
T KOG2551|consen 106 DGLLGFSQGAALAALLAGLGQKG---LPY--VKQPPFKFAVFISGFKFPSKKLDES------------------------ 156 (230)
T ss_pred ccccccchhHHHHHHhhcccccC---Ccc--cCCCCeEEEEEEecCCCCcchhhhh------------------------
Confidence 47999999999999888722111 000 1135567777778733221111100
Q ss_pred ccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHH
Q 027370 106 PAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHI 185 (224)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i 185 (224)
.......+|.|.+.|+.|.+||...++.+++.+. +..+..-+ +||.. | ......+.|
T Consensus 157 ----------~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~----~a~vl~Hp-ggH~V-----P---~~~~~~~~i 213 (230)
T KOG2551|consen 157 ----------AYKRPLSTPSLHIFGETDTIVPSERSEQLAESFK----DATVLEHP-GGHIV-----P---NKAKYKEKI 213 (230)
T ss_pred ----------hhccCCCCCeeEEecccceeecchHHHHHHHhcC----CCeEEecC-CCccC-----C---CchHHHHHH
Confidence 1112234899999999999999999999999873 33555555 78982 2 245888889
Q ss_pred HHHHHhhC
Q 027370 186 IAVIHAND 193 (224)
Q Consensus 186 ~~fl~~~~ 193 (224)
++|+....
T Consensus 214 ~~fi~~~~ 221 (230)
T KOG2551|consen 214 ADFIQSFL 221 (230)
T ss_pred HHHHHHHH
Confidence 99998753
No 109
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.57 E-value=5.8e-07 Score=73.62 Aligned_cols=142 Identities=13% Similarity=0.086 Sum_probs=90.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|..++.++|.+... .++++|+++|.|+||+++..++-.. +..+++++...+..|+...+...
T Consensus 508 f~DFIa~a~~Lv~~g~---~~~~~i~a~GGSAGGmLmGav~N~~-------------P~lf~~iiA~VPFVDvltTMlD~ 571 (682)
T COG1770 508 FTDFIAAARHLVKEGY---TSPDRIVAIGGSAGGMLMGAVANMA-------------PDLFAGIIAQVPFVDVLTTMLDP 571 (682)
T ss_pred HHHHHHHHHHHHHcCc---CCccceEEeccCchhHHHHHHHhhC-------------hhhhhheeecCCccchhhhhcCC
Confidence 4688888888887643 5678999999999999999887765 57788888888876655433221
Q ss_pred hhc---chhHHHHHhhcc-CCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCC---c
Q 027370 82 HNR---GLYRSIFLSIME-GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGA---K 154 (224)
Q Consensus 82 ~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~---~ 154 (224)
... .-+..+...... -......++|..... ....|++|++.|-+|+.|...+..++.++|++... +
T Consensus 572 slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~-------a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~p 644 (682)
T COG1770 572 SLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVE-------AQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNP 644 (682)
T ss_pred CCCCCccchhhhCCcCCHHHHHHHhhcCchhccc-------cCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCc
Confidence 100 001111000000 000111223322221 13458999999999999999999999999986543 3
Q ss_pred cEEEEcCCCCCc
Q 027370 155 PELVLYPGKSHT 166 (224)
Q Consensus 155 ~~~~~~~~~~H~ 166 (224)
.-++.=..+||.
T Consensus 645 lLlkt~M~aGHg 656 (682)
T COG1770 645 LLLKTNMDAGHG 656 (682)
T ss_pred EEEEecccccCC
Confidence 445554679997
No 110
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=5.6e-07 Score=73.31 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=92.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|..++.+||.++.- ..+++..+.|.|+||.++..++-++ ++.+.+++.-.|..|+.......
T Consensus 530 f~Dfia~AeyLve~gy---t~~~kL~i~G~SaGGlLvga~iN~r-------------PdLF~avia~VpfmDvL~t~~~t 593 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGY---TQPSKLAIEGGSAGGLLVGACINQR-------------PDLFGAVIAKVPFMDVLNTHKDT 593 (712)
T ss_pred HHHHHHHHHHHHHcCC---CCccceeEecccCccchhHHHhccC-------------chHhhhhhhcCcceehhhhhccC
Confidence 5788899999988753 5678999999999999998877665 57788888888877766544322
Q ss_pred hhcchhHHHHHh--hccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHc-------C
Q 027370 82 HNRGLYRSIFLS--IMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKV-------G 152 (224)
Q Consensus 82 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~-------~ 152 (224)
..... ..-+.. ......+.-.+++..-.+..... ..-|.+||..+.+|..|++.++..+.++++.. .
T Consensus 594 ilplt-~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q---~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~ 669 (712)
T KOG2237|consen 594 ILPLT-TSDYEEWGNPEDFEDLIKISPYSPVDNIKKQ---VQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQT 669 (712)
T ss_pred ccccc-hhhhcccCChhhhhhhheecccCccCCCchh---ccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcC
Confidence 11111 000000 00011111111111111111000 03478999999999999998999999888743 2
Q ss_pred CccEEEEcCCCCCc
Q 027370 153 AKPELVLYPGKSHT 166 (224)
Q Consensus 153 ~~~~~~~~~~~~H~ 166 (224)
.++-+++..++||+
T Consensus 670 ~pvll~i~~~agH~ 683 (712)
T KOG2237|consen 670 NPVLLRIETKAGHG 683 (712)
T ss_pred CCEEEEEecCCccc
Confidence 45788899999998
No 111
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.56 E-value=2.4e-06 Score=63.31 Aligned_cols=130 Identities=14% Similarity=0.113 Sum_probs=77.9
Q ss_pred cchHHHHHHHHHhccccc-----CCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh
Q 027370 2 VKDVSQGISFVFNNIADY-----GGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN 76 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~-----~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 76 (224)
++++...++|+.+..... ..|.++++|+|||.||-++..+++.+..... ..++++++.+.+.-....
T Consensus 64 ~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~--------~~~~~ali~lDPVdG~~~ 135 (259)
T PF12740_consen 64 VASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL--------DLRFSALILLDPVDGMSK 135 (259)
T ss_pred HHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhccccc--------ccceeEEEEecccccccc
Confidence 456788999988765432 2577899999999999999998887532111 246777777766210000
Q ss_pred hhhHhhhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCc---------cCc-hHHHHHHH
Q 027370 77 LVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYS---------IPS-DASMAFAD 146 (224)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~---------vp~-~~~~~~~~ 146 (224)
. ....|...... ....+...|++++-.+-... .|. .+-.+|++
T Consensus 136 ~------------------------~~~~P~v~~~~---p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~ 188 (259)
T PF12740_consen 136 G------------------------SQTEPPVLTYT---PQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFD 188 (259)
T ss_pred c------------------------cCCCCccccCc---ccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHH
Confidence 0 00111111110 11111236999887776642 233 35577777
Q ss_pred HHHHcCCccEEEEcCCCCCchhh
Q 027370 147 ALQKVGAKPELVLYPGKSHTDLF 169 (224)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~H~~~~ 169 (224)
.+ ..+.-..+.++.||++++
T Consensus 189 ~~---~~p~~~~v~~~~GH~d~L 208 (259)
T PF12740_consen 189 EC---KPPSWHFVAKDYGHMDFL 208 (259)
T ss_pred hc---CCCEEEEEeCCCCchHhh
Confidence 76 456667777999999544
No 112
>COG0627 Predicted esterase [General function prediction only]
Probab=98.52 E-value=4.2e-07 Score=69.77 Aligned_cols=146 Identities=16% Similarity=0.160 Sum_probs=89.7
Q ss_pred cEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh------hhcchhHHHHHhhccCC
Q 027370 25 RIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC------HNRGLYRSIFLSIMEGE 98 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 98 (224)
+..|+||||||+-|+.+|++++ ++++.+..++|..+........ ........++... ..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~p-------------d~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~--~~ 217 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHP-------------DRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPD--SD 217 (316)
T ss_pred CceeEEEeccchhhhhhhhhCc-------------chhceeccccccccccccccccccccccccCccHHHhcCCC--cc
Confidence 7999999999999999999973 4566666666655443111100 0111111111111 11
Q ss_pred CCCCCCCccccccC---C---CccccCCCCCCEEEEeeCCCCccC--chHHHHHHHHHHHcCCccEEEEcCCCCCchhhh
Q 027370 99 ESLPVFSPAVRIKD---P---SIRDASSLLPPIILFHGTSDYSIP--SDASMAFADALQKVGAKPELVLYPGKSHTDLFL 170 (224)
Q Consensus 99 ~~~~~~~~~~~~~~---~---~~~~~~~~~~P~lii~g~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 170 (224)
..+...++...... . .........+++++-+|..|.+.. ....+.|.+++.+.|.+..++..++.+|.+.+.
T Consensus 218 ~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w 297 (316)
T COG0627 218 PAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYFW 297 (316)
T ss_pred ccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHHH
Confidence 12333333333321 0 000001134678888999998764 245788999999889898999999999997664
Q ss_pred cCCCCCCccHHHHHHHHHHHhhC
Q 027370 171 QDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 171 ~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
+..++....|+....
T Consensus 298 --------~~~l~~~~~~~a~~l 312 (316)
T COG0627 298 --------ASQLADHLPWLAGAL 312 (316)
T ss_pred --------HHHHHHHHHHHHHHh
Confidence 478888888887764
No 113
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.45 E-value=3.9e-06 Score=56.88 Aligned_cols=96 Identities=20% Similarity=0.217 Sum_probs=63.4
Q ss_pred CCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCCCC
Q 027370 21 GDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEES 100 (224)
Q Consensus 21 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (224)
++..+.++.|+||||-++..++... ...+.+++.++ |++.+.
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~-------------~A~i~~L~clg--YPfhpp----------------------- 127 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADEL-------------QAPIDGLVCLG--YPFHPP----------------------- 127 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhh-------------cCCcceEEEec--CccCCC-----------------------
Confidence 3445799999999999999888653 23355555444 222111
Q ss_pred CCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCc
Q 027370 101 LPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 166 (224)
...+.....++...+.|++|++|+.|++-..++.-.++ + ..+.+++++++++|.
T Consensus 128 -------GKPe~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~--l---s~~iev~wl~~adHD 181 (213)
T COG3571 128 -------GKPEQLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA--L---SDPIEVVWLEDADHD 181 (213)
T ss_pred -------CCcccchhhhccCCCCCeEEeecccccccCHHHHHhhh--c---CCceEEEEeccCccc
Confidence 11111112455566789999999999986666553332 2 467999999999998
No 114
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.45 E-value=1.6e-06 Score=68.67 Aligned_cols=72 Identities=14% Similarity=0.190 Sum_probs=56.8
Q ss_pred cCCCC-CCEEEEeeCCCCccCchHHHHHHHHHHHcC-CccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 118 ASSLL-PPIILFHGTSDYSIPSDASMAFADALQKVG-AKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 118 ~~~~~-~P~lii~g~~D~~vp~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+..++ +|+|.+-|+.|.++|+.++..+.+.+...+ ..++.+..+++||..++.+.. ..+++...|.+||.++
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r---~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSR---FREEIYPLVREFIRRN 406 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChh---hhhhhchHHHHHHHhC
Confidence 34567 899999999999999999999998764333 345677778899997776544 3678899999999763
No 115
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.45 E-value=1.5e-07 Score=72.81 Aligned_cols=50 Identities=24% Similarity=0.155 Sum_probs=38.3
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeec
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLS 69 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 69 (224)
-|...+++||.+..+ +|++||+++|+||||..++.++.- .++|+..+..+
T Consensus 208 ~ddmr~lDfL~slpe---VD~~RIG~~GfSmGg~~a~~LaAL--------------DdRIka~v~~~ 257 (390)
T PF12715_consen 208 WDDMRALDFLASLPE---VDPDRIGCMGFSMGGYRAWWLAAL--------------DDRIKATVANG 257 (390)
T ss_dssp HHHHHHHHHHCT-TT---EEEEEEEEEEEGGGHHHHHHHHHH---------------TT--EEEEES
T ss_pred HHHHHHHHHHhcCcc---cCccceEEEeecccHHHHHHHHHc--------------chhhHhHhhhh
Confidence 356679999988765 889999999999999999998877 46787776544
No 116
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.44 E-value=2.3e-07 Score=69.64 Aligned_cols=53 Identities=23% Similarity=0.312 Sum_probs=41.1
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccch
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLL 75 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 75 (224)
+.+.+|.++ +++++++.+|+|+||||..|+.++.++ ++.+..++..+|.++..
T Consensus 101 el~p~i~~~---~~~~~~~~~i~G~S~GG~~Al~~~l~~-------------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEAN---YRTDPDRRAIAGHSMGGYGALYLALRH-------------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHH---SSEEECCEEEEEETHHHHHHHHHHHHS-------------TTTESEEEEESEESETT
T ss_pred cchhHHHHh---cccccceeEEeccCCCcHHHHHHHHhC-------------ccccccccccCcccccc
Confidence 455566654 345555599999999999999999997 57788999999866554
No 117
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.43 E-value=6.3e-06 Score=67.50 Aligned_cols=49 Identities=29% Similarity=0.248 Sum_probs=39.9
Q ss_pred ccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhh
Q 027370 117 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLF 169 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 169 (224)
++.++++|+|++.|+.|.++|.+.+....+.+ +.+++++..+ +||.-..
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~---gs~~~fvl~~-gGHIggi 484 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDAVYRSALLL---GGKRRFVLSN-SGHIQSI 484 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHHHHHHHHHc---CCCeEEEecC-CCccccc
Confidence 45568899999999999999999999998876 4467877775 7898443
No 118
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.42 E-value=1.8e-06 Score=67.49 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=103.7
Q ss_pred CcchHHHHHHHHHhcccc-cCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeec-ccccchhhh
Q 027370 1 MVKDVSQGISFVFNNIAD-YGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLS-GGYNLLNLV 78 (224)
Q Consensus 1 ~~~D~~~al~~l~~~~~~-~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 78 (224)
|++-+..|++-+++...+ .+.+.++.+|.|.|-=|+.+...|.. ..++++++... ...++...+
T Consensus 148 Mtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~--------------D~RV~aivP~Vid~LN~~~~l 213 (367)
T PF10142_consen 148 MTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV--------------DPRVKAIVPIVIDVLNMKANL 213 (367)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc--------------CcceeEEeeEEEccCCcHHHH
Confidence 445667788888777644 36677799999999999999998885 46788777654 222333222
Q ss_pred hHhhh-cc-hhHHHHHhhccCCCCCCCCCcc---ccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCC
Q 027370 79 DHCHN-RG-LYRSIFLSIMEGEESLPVFSPA---VRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGA 153 (224)
Q Consensus 79 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~ 153 (224)
..... .. .+...+..+....-.....+|. .....+++....+...|.||+.|..|+.-.++.+.-|.+.|. .
T Consensus 214 ~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~---G 290 (367)
T PF10142_consen 214 EHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP---G 290 (367)
T ss_pred HHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC---C
Confidence 21111 11 1110011110000000000111 011122333334446899999999999999999999999984 4
Q ss_pred ccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 154 KPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 154 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
++.++.+|+++|... ..++.+.+..|+....
T Consensus 291 ~K~lr~vPN~~H~~~---------~~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 291 EKYLRYVPNAGHSLI---------GSDVVQSLRAFYNRIQ 321 (367)
T ss_pred CeeEEeCCCCCcccc---------hHHHHHHHHHHHHHHH
Confidence 779999999999921 2588888999998753
No 119
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.40 E-value=9.7e-06 Score=61.11 Aligned_cols=143 Identities=15% Similarity=0.104 Sum_probs=79.7
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHC 81 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (224)
++|+..+++|+.+. + .++++|+||||||.+++.++.+. +..+.+++..++..........+
T Consensus 83 ~~Dv~~ai~~L~~~----~--~~~v~LvG~SmGG~vAl~~A~~~-------------p~~v~~lVL~~P~~~g~~~l~~~ 143 (266)
T TIGR03101 83 KEDVAAAYRWLIEQ----G--HPPVTLWGLRLGALLALDAANPL-------------AAKCNRLVLWQPVVSGKQQLQQF 143 (266)
T ss_pred HHHHHHHHHHHHhc----C--CCCEEEEEECHHHHHHHHHHHhC-------------ccccceEEEeccccchHHHHHHH
Confidence 46788888888764 2 24899999999999999988775 35677788777755544443332
Q ss_pred hhcchhHHHHHhhccC-----------CCC--CCC--CCccccccC--CCccccCCCCCCEEEEeeCCCC-ccCchHHHH
Q 027370 82 HNRGLYRSIFLSIMEG-----------EES--LPV--FSPAVRIKD--PSIRDASSLLPPIILFHGTSDY-SIPSDASMA 143 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~-----------~~~--~~~--~~~~~~~~~--~~~~~~~~~~~P~lii~g~~D~-~vp~~~~~~ 143 (224)
................ .+. ... +.+.....- ..+........+++++..+.+. --+.....+
T Consensus 144 lrl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (266)
T TIGR03101 144 LRLRLVARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSR 223 (266)
T ss_pred HHHHHHHHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHH
Confidence 2211111111100000 000 000 011100000 0011111124577888764321 222356788
Q ss_pred HHHHHHHcCCccEEEEcCCC
Q 027370 144 FADALQKVGAKPELVLYPGK 163 (224)
Q Consensus 144 ~~~~l~~~~~~~~~~~~~~~ 163 (224)
+++++++.|..++...++|.
T Consensus 224 l~~~~~~~g~~v~~~~~~~~ 243 (266)
T TIGR03101 224 LGEQWVQSGVEVTVDLVPGP 243 (266)
T ss_pred HHHHHHHcCCeEeeeecCCc
Confidence 99999999999999999986
No 120
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.38 E-value=5e-07 Score=75.19 Aligned_cols=58 Identities=36% Similarity=0.503 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecc
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSG 70 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 70 (224)
+.|...|++|+++++..+|+||++|.|+|+|+||..+...+..... ...+..+|..+|
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~-----------~~LF~raI~~SG 243 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSS-----------KGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGG-----------TTSBSEEEEES-
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccc-----------cccccccccccc
Confidence 4699999999999999999999999999999999999988877321 246777887777
No 121
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.36 E-value=2.5e-06 Score=64.86 Aligned_cols=145 Identities=17% Similarity=0.205 Sum_probs=80.1
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh-h---
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN-L--- 77 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~--- 77 (224)
.+|..++|+|+.++. -+..||+++|.|.+|..++.+|... ++.+++++...+..+... .
T Consensus 83 ~~D~~d~I~W~~~Qp----ws~G~VGm~G~SY~G~~q~~~A~~~-------------~p~LkAi~p~~~~~d~~~~~~~~ 145 (272)
T PF02129_consen 83 AQDGYDTIEWIAAQP----WSNGKVGMYGISYGGFTQWAAAARR-------------PPHLKAIVPQSGWSDLYRDSIYP 145 (272)
T ss_dssp HHHHHHHHHHHHHCT----TEEEEEEEEEETHHHHHHHHHHTTT--------------TTEEEEEEESE-SBTCCTSSEE
T ss_pred HHHHHHHHHHHHhCC----CCCCeEEeeccCHHHHHHHHHHhcC-------------CCCceEEEecccCCcccccchhc
Confidence 368999999999873 2345899999999999999998854 456777766655444322 0
Q ss_pred ---------hhH---h------hhcc-----hhH----------HHHHhhccCC----C--CCCCCCccccccCCCcccc
Q 027370 78 ---------VDH---C------HNRG-----LYR----------SIFLSIMEGE----E--SLPVFSPAVRIKDPSIRDA 118 (224)
Q Consensus 78 ---------~~~---~------~~~~-----~~~----------~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~ 118 (224)
..+ . .... ... .......... . ...... ............
T Consensus 146 gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~~~~ 224 (272)
T PF02129_consen 146 GGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYD-PFWQERSPSERL 224 (272)
T ss_dssp TTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSS-HHHHTTBHHHHH
T ss_pred CCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcC-HHHHhCChHHHH
Confidence 000 0 0000 000 0000000000 0 000000 000111111223
Q ss_pred CCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcC-CccEEEEcCCCCCc
Q 027370 119 SSLLPPIILFHGTSDYSIPSDASMAFADALQKVG-AKPELVLYPGKSHT 166 (224)
Q Consensus 119 ~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~ 166 (224)
.++.+|+|++.|-.|.... ..+.+.+++++..+ .+.++++-| .+|+
T Consensus 225 ~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 225 DKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGP-WTHG 271 (272)
T ss_dssp GG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEES-ESTT
T ss_pred hhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeC-CCCC
Confidence 5677999999999996655 78888889987666 456777766 5675
No 122
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.33 E-value=1.8e-05 Score=58.74 Aligned_cols=61 Identities=23% Similarity=0.467 Sum_probs=41.5
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
...+|+++++|+.|.+.|......+.+.+.. ..++.++++++|.....+ .+.+.+.+.+|+
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~------p~~~~~~i~~~~ 279 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN---DARLVVIPGAGHFPHLEA------PEAFAAALLAFL 279 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC---CceEEEeCCCCCcchhhc------HHHHHHHHHHHH
Confidence 4568999999999966665554445444321 479999999999943332 446666666643
No 123
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.32 E-value=7.7e-06 Score=63.99 Aligned_cols=72 Identities=18% Similarity=0.137 Sum_probs=48.8
Q ss_pred ccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccH---HHHHHHHHHHhh
Q 027370 117 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDD---LFDHIIAVIHAN 192 (224)
Q Consensus 117 ~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~---~~~~i~~fl~~~ 192 (224)
++..++||++++.|++|.++|.......++.+ +.++++...+ .||.......|.....+. .-.+...|+...
T Consensus 325 dL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~---~g~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 325 DLGDITCPVYNLAAEEDHIAPWSSVYLGARLL---GGEVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred chhhcccceEEEeecccccCCHHHHHHHHHhc---CCceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhh
Confidence 45568899999999999999998887777665 4466766664 899966655443321111 223667777653
No 124
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.31 E-value=2.6e-05 Score=65.23 Aligned_cols=40 Identities=18% Similarity=0.062 Sum_probs=33.3
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.+|+.++++|+.++.. .+ .+|+++|+|+||.+++.++...
T Consensus 79 ~~D~~~~i~~l~~q~~---~~-~~v~~~G~S~GG~~a~~~a~~~ 118 (550)
T TIGR00976 79 AADGYDLVDWIAKQPW---CD-GNVGMLGVSYLAVTQLLAAVLQ 118 (550)
T ss_pred chHHHHHHHHHHhCCC---CC-CcEEEEEeChHHHHHHHHhccC
Confidence 5799999999987632 22 5899999999999999998875
No 125
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.24 E-value=7.3e-07 Score=73.56 Aligned_cols=43 Identities=40% Similarity=0.687 Sum_probs=40.2
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
+.|+..|++|+++++..+|+|+++|+|+|+|+||.++..++..
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 4699999999999999999999999999999999999988776
No 126
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.24 E-value=8.5e-06 Score=61.64 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=35.7
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCch
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTD 167 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 167 (224)
..++.+..|.+|.+||.+..+++.++......++++.. +|-.|.|
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPHAF 265 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCCC
Confidence 56899999999999999999999888754334556555 7888874
No 127
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.23 E-value=2e-05 Score=58.82 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=54.0
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
.+|-+.++++.|.+++.+..+++++..++.|.+++...+++..|...+-. ..++..+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~-----~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRK-----HPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhccc-----CHHHHHHHHHhhC
Confidence 47999999999999999999999999999999999999999999944322 3678888887774
No 128
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.17 E-value=7e-06 Score=66.72 Aligned_cols=47 Identities=19% Similarity=0.351 Sum_probs=41.0
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhh
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLF 169 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 169 (224)
..+.|+|++.|.+|..++....+++.++++ ..++++++.+++|.+-.
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMq---A~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQ---AEVELHVIGGADHSMAI 348 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhh---ccceEEEecCCCccccC
Confidence 345799999999999999999999999986 45689999999999544
No 129
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.17 E-value=6.1e-05 Score=58.23 Aligned_cols=65 Identities=22% Similarity=0.311 Sum_probs=49.2
Q ss_pred cCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEE-cCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 118 ASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVL-YPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 118 ~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~-~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
+..++.|+|++.-+.|.+.|+++.++.++.+...+. +++ -...||.-++.. .+.+...|..||+.
T Consensus 302 l~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i~S~~GHDaFL~e------~~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREIDSPYGHDAFLVE------SEAVGPLIRKFLAL 367 (368)
T ss_pred HhcCccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEecCCCCchhhhcc------hhhhhHHHHHHhhc
Confidence 445778999999999999999999999999865543 434 355789844432 45677888888864
No 130
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.15 E-value=2e-06 Score=68.57 Aligned_cols=43 Identities=35% Similarity=0.539 Sum_probs=39.6
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
+.|+..||+|++++++.+|.|+++|.|+|+|+||+.++.++.-
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~ 200 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV 200 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC
Confidence 4689999999999999999999999999999999999877654
No 131
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.14 E-value=6.6e-05 Score=56.45 Aligned_cols=122 Identities=20% Similarity=0.157 Sum_probs=70.6
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchh
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLY 87 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (224)
.+-|+.+..... -+.+.-+|+|.|+||.++++.++++ ++.+..++..+|.+......... +
T Consensus 162 LlP~v~~~yp~~-~~a~~r~L~G~SlGG~vsL~agl~~-------------Pe~FG~V~s~Sps~~~~~~~~~~-~---- 222 (299)
T COG2382 162 LLPYVEERYPTS-ADADGRVLAGDSLGGLVSLYAGLRH-------------PERFGHVLSQSGSFWWTPLDTQP-Q---- 222 (299)
T ss_pred hhhhhhccCccc-ccCCCcEEeccccccHHHHHHHhcC-------------chhhceeeccCCccccCcccccc-c----
Confidence 344555543322 2345789999999999999999997 56788888888744322111100 0
Q ss_pred HHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCch
Q 027370 88 RSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTD 167 (224)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 167 (224)
.............. ....-++...++.+.+ ....+++++.+++.+.+..+..|+| ||.+
T Consensus 223 ----------~~~~~~l~~~~a~~--------~~~~~~l~~g~~~~~~--~~pNr~L~~~L~~~g~~~~yre~~G-gHdw 281 (299)
T COG2382 223 ----------GEVAESLKILHAIG--------TDERIVLTTGGEEGDF--LRPNRALAAQLEKKGIPYYYREYPG-GHDW 281 (299)
T ss_pred ----------cchhhhhhhhhccC--------ccceEEeecCCccccc--cchhHHHHHHHHhcCCcceeeecCC-CCch
Confidence 00000000000000 0111233333333433 4677889999999999999999998 9995
Q ss_pred hh
Q 027370 168 LF 169 (224)
Q Consensus 168 ~~ 169 (224)
..
T Consensus 282 ~~ 283 (299)
T COG2382 282 AW 283 (299)
T ss_pred hH
Confidence 44
No 132
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.07 E-value=2.6e-06 Score=60.38 Aligned_cols=127 Identities=18% Similarity=0.204 Sum_probs=72.1
Q ss_pred cCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCC
Q 027370 19 YGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGE 98 (224)
Q Consensus 19 ~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (224)
..+|+.++.|+||||||+-|+..+++. +.+.+.+..+.+..+.... .+-+..+..+.+.+
T Consensus 136 ~pld~~k~~IfGHSMGGhGAl~~~Lkn-------------~~kykSvSAFAPI~NP~~c-------pWGqKAf~gYLG~~ 195 (283)
T KOG3101|consen 136 VPLDPLKVGIFGHSMGGHGALTIYLKN-------------PSKYKSVSAFAPICNPINC-------PWGQKAFTGYLGDN 195 (283)
T ss_pred ccccchhcceeccccCCCceEEEEEcC-------------cccccceeccccccCcccC-------cchHHHhhcccCCC
Confidence 358888999999999999998877775 3445555555554433221 11222233333332
Q ss_pred -CCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCch-HHHHHHHHHHHcC-CccEEEEcCCCCCchhhh
Q 027370 99 -ESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSD-ASMAFADALQKVG-AKPELVLYPGKSHTDLFL 170 (224)
Q Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~-~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~ 170 (224)
..+..+++....... .....-+||=+|..|...+-. .-+.+.+++++.. .++.++..+|-+|.+.+.
T Consensus 196 ka~W~~yDat~lik~y-----~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyfI 265 (283)
T KOG3101|consen 196 KAQWEAYDATHLIKNY-----RGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYFI 265 (283)
T ss_pred hHHHhhcchHHHHHhc-----CCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceeee
Confidence 122233332222211 111234899999999886611 1234445544222 568888999999996553
No 133
>COG3150 Predicted esterase [General function prediction only]
Probab=98.05 E-value=1.5e-05 Score=54.41 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=30.3
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
|...+++.+.+...+++.. ...|+|.|.||+.|.+++.+..
T Consensus 41 ~p~~a~~ele~~i~~~~~~--~p~ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 41 DPQQALKELEKAVQELGDE--SPLIVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred CHHHHHHHHHHHHHHcCCC--CceEEeecchHHHHHHHHHHhC
Confidence 4456666666655554433 4999999999999999998854
No 134
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.05 E-value=7.3e-05 Score=56.01 Aligned_cols=43 Identities=30% Similarity=0.470 Sum_probs=33.0
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
|+.-..+-+.....++++|++||++.|.|.||.++..++...+
T Consensus 124 dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p 166 (312)
T COG3509 124 DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYP 166 (312)
T ss_pred HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCc
Confidence 4433344444445578999999999999999999999988763
No 135
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.97 E-value=0.00013 Score=54.18 Aligned_cols=40 Identities=25% Similarity=0.293 Sum_probs=33.4
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecc
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSG 70 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 70 (224)
.+.++.++.+|+|||+||.+++...++. +..+..++..++
T Consensus 131 ~y~~~~~~~~i~GhSlGGLfvl~aLL~~-------------p~~F~~y~~~SP 170 (264)
T COG2819 131 RYRTNSERTAIIGHSLGGLFVLFALLTY-------------PDCFGRYGLISP 170 (264)
T ss_pred ccccCcccceeeeecchhHHHHHHHhcC-------------cchhceeeeecc
Confidence 3568889999999999999999998886 466777777776
No 136
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.96 E-value=3.7e-05 Score=49.35 Aligned_cols=61 Identities=25% Similarity=0.301 Sum_probs=50.1
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..|+|++.++.|+.+|.+.++.+++++ .+.+++.+++.||..... ...-+.+.+.+||...
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l----~~s~lvt~~g~gHg~~~~------~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL----PGSRLVTVDGAGHGVYAG------GSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC----CCceEEEEeccCcceecC------CChHHHHHHHHHHHcC
Confidence 489999999999999999999999987 447999999999994321 1446677788999864
No 137
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.91 E-value=0.00015 Score=57.05 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=35.0
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcC
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYP 161 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~ 161 (224)
+-....|+..|..+|.+.-+.+++.+++.|-+++++.+.
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIk 332 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIK 332 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence 456778999999999999999999999999999999983
No 138
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.90 E-value=0.00018 Score=50.80 Aligned_cols=138 Identities=19% Similarity=0.215 Sum_probs=73.0
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccc--cchhhhhH
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGY--NLLNLVDH 80 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~ 80 (224)
.|+.+.+++..+. ++. ++++|+|.|+|+-+...+.-+.+... ..+++.++.+++.. ++.--...
T Consensus 52 ~Dl~~~i~~y~~~---w~~--~~vvLiGYSFGADvlP~~~nrLp~~~---------r~~v~~v~Ll~p~~~~dFeihv~~ 117 (192)
T PF06057_consen 52 ADLARIIRHYRAR---WGR--KRVVLIGYSFGADVLPFIYNRLPAAL---------RARVAQVVLLSPSTTADFEIHVSG 117 (192)
T ss_pred HHHHHHHHHHHHH---hCC--ceEEEEeecCCchhHHHHHhhCCHHH---------HhheeEEEEeccCCcceEEEEhhh
Confidence 4566666666553 334 48999999999988876655532221 24566666655422 11100000
Q ss_pred hhhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEc
Q 027370 81 CHNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLY 160 (224)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 160 (224)
++ ........+.+....... ...|++.++|++|.-.... .+. ..+++.+..
T Consensus 118 ---------wl----g~~~~~~~~~~~pei~~l-------~~~~v~CiyG~~E~d~~cp-------~l~--~~~~~~i~l 168 (192)
T PF06057_consen 118 ---------WL----GMGGDDAAYPVIPEIAKL-------PPAPVQCIYGEDEDDSLCP-------SLR--QPGVEVIAL 168 (192)
T ss_pred ---------hc----CCCCCcccCCchHHHHhC-------CCCeEEEEEcCCCCCCcCc-------ccc--CCCcEEEEc
Confidence 00 010001000111111000 1259999999988542221 121 357899999
Q ss_pred CCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 161 PGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 161 ~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
||+.|+. ...+++.+.|++-+++
T Consensus 169 pGgHHfd--------~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 169 PGGHHFD--------GDYDALAKRILDALKA 191 (192)
T ss_pred CCCcCCC--------CCHHHHHHHHHHHHhc
Confidence 9877761 1356777777776654
No 139
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.87 E-value=0.00023 Score=52.20 Aligned_cols=157 Identities=16% Similarity=0.221 Sum_probs=85.2
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhc
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNR 84 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (224)
...++.+|.++ |+++ ++-++||||||.-...++....... .-+.+..++.+.+.++...+...-...
T Consensus 122 lk~~msyL~~~---Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dk--------s~P~lnK~V~l~gpfN~~~l~~de~v~ 188 (288)
T COG4814 122 LKKAMSYLQKH---YNIP--KFNAVGHSMGGLGLTYYMIDYGDDK--------SLPPLNKLVSLAGPFNVGNLVPDETVT 188 (288)
T ss_pred HHHHHHHHHHh---cCCc--eeeeeeeccccHHHHHHHHHhcCCC--------CCcchhheEEecccccccccCCCcchh
Confidence 34566677664 4455 8999999999999999988754332 135677888888877622221100000
Q ss_pred chhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCC------CCccCchHHHHHHHHHHHcCCccEEE
Q 027370 85 GLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTS------DYSIPSDASMAFADALQKVGAKPELV 158 (224)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~------D~~vp~~~~~~~~~~l~~~~~~~~~~ 158 (224)
.. ...... ..+.........-..-.....-+|++.|+- |..||...+.....-+...+...+-.
T Consensus 189 ~v--------~~~~~~--~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~ 258 (288)
T COG4814 189 DV--------LKDGPG--LIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIES 258 (288)
T ss_pred ee--------eccCcc--ccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEE
Confidence 00 000000 000000000000000011224689999985 66778777776666665555444444
Q ss_pred EcCC--CCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 159 LYPG--KSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 159 ~~~~--~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
+|+| +.|.-.. +...+.+.+..||-+
T Consensus 259 ~~~Gk~a~Hs~lh-------en~~v~~yv~~FLw~ 286 (288)
T COG4814 259 LYKGKDARHSKLH-------ENPTVAKYVKNFLWE 286 (288)
T ss_pred eeeCCcchhhccC-------CChhHHHHHHHHhhc
Confidence 5654 6776211 256889999999864
No 140
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.81 E-value=2.7e-05 Score=60.21 Aligned_cols=42 Identities=19% Similarity=0.126 Sum_probs=33.7
Q ss_pred chHHHHHHHHHhc---c-cccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 3 KDVSQGISFVFNN---I-ADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 3 ~D~~~al~~l~~~---~-~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
.|+...++++.+. . -.-.+|+.+|.++|||.||+.++.++..
T Consensus 134 ~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 134 LDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred ccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccc
Confidence 5888899999877 2 1223788899999999999999988754
No 141
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.77 E-value=0.00059 Score=52.41 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=34.7
Q ss_pred CcchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 1 MVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 1 ~~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
+++|..+.++|+++... |+.+++|++.|||.||.++..++..+
T Consensus 194 Lv~~~~a~v~yL~d~~~--G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 194 LVKDYQACVRYLRDEEQ--GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHhccc--CCChheEEEeeccccHHHHHHHHHhc
Confidence 46788899999987543 67788999999999999998755543
No 142
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.76 E-value=0.00057 Score=50.53 Aligned_cols=44 Identities=16% Similarity=0.270 Sum_probs=35.3
Q ss_pred cchHHHHHHHHHhccccc-----CCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 2 VKDVSQGISFVFNNIADY-----GGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~-----~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
++++..+++|+.+.+... ..+.+++.++|||.||-.|..+|+..
T Consensus 93 i~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~ 141 (307)
T PF07224_consen 93 IKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGY 141 (307)
T ss_pred HHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcc
Confidence 567889999998775432 24556999999999999999999864
No 143
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.75 E-value=0.00012 Score=55.98 Aligned_cols=66 Identities=21% Similarity=0.432 Sum_probs=52.3
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
.|+|++||..|..||...+..+++..... +.+...+++++|....... +..++..+++.+|+.+..
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNP---PAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCcc---HHHHHHHHHHHHHHHHhc
Confidence 69999999999999999999999887533 6788889999999443211 123488999999998763
No 144
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.73 E-value=0.00054 Score=54.54 Aligned_cols=75 Identities=17% Similarity=0.277 Sum_probs=56.2
Q ss_pred CccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 114 SIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 114 ~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
+...+..+..|+.+.+|++|.++.++..+.+...+..... ....-+++-.|.+..++.. ..+++.+.|++.++..
T Consensus 324 P~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~d---a~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 324 PEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLD---AKEEVYDPVIERLRLF 398 (403)
T ss_pred CCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCccceeeeeccC---cHHHHHHHHHHHHHhh
Confidence 3455666788999999999999999888877776643322 2333379999998776644 4789999999998864
No 145
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.72 E-value=0.00014 Score=52.57 Aligned_cols=63 Identities=21% Similarity=0.357 Sum_probs=46.8
Q ss_pred CCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCC----CCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 120 SLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPG----KSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 120 ~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~----~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
....|++.+.+.+|+.+|....+.|..... +.+.+.+.++. -||+- ++..+ .|.+.+++++|+
T Consensus 214 aVrtPi~~~~~~DD~w~P~As~d~f~~~y~--nApl~~~~~~~~~~~lGH~g-yfR~~----~Ealwk~~L~w~ 280 (281)
T COG4757 214 AVRTPITFSRALDDPWAPPASRDAFASFYR--NAPLEMRDLPRAEGPLGHMG-YFREP----FEALWKEMLGWF 280 (281)
T ss_pred HhcCceeeeccCCCCcCCHHHHHHHHHhhh--cCcccceecCcccCcccchh-hhccc----hHHHHHHHHHhh
Confidence 345799999999999999998898888764 35667777655 48883 33222 378888888886
No 146
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.71 E-value=9.6e-05 Score=56.27 Aligned_cols=39 Identities=26% Similarity=0.424 Sum_probs=28.9
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
++...++++.+. .+.+.++++++|||+||+++..++.+.
T Consensus 95 ~la~~l~~L~~~---~g~~~~~i~lIGhSlGa~vAg~~a~~~ 133 (275)
T cd00707 95 ELAKFLDFLVDN---TGLSLENVHLIGHSLGAHVAGFAGKRL 133 (275)
T ss_pred HHHHHHHHHHHh---cCCChHHEEEEEecHHHHHHHHHHHHh
Confidence 344555555442 345667999999999999999998875
No 147
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.69 E-value=0.00014 Score=53.61 Aligned_cols=60 Identities=17% Similarity=0.259 Sum_probs=38.1
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccc
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNL 74 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 74 (224)
+..+++.|.+....-...+++|+|+||||||.++-.++...... ...++.++.++.+..-
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~----------~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYD----------PDSVKTIITLGTPHRG 125 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccc----------cccEEEEEEEcCCCCC
Confidence 34556666554422234567999999999998887776543211 2457777777654433
No 148
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.63 E-value=5.6e-05 Score=63.28 Aligned_cols=43 Identities=37% Similarity=0.577 Sum_probs=39.7
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
+.|...|++|+++++..+|.|+++|.|+|||+||..+..++..
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC
Confidence 3589999999999999999999999999999999999887765
No 149
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.63 E-value=0.00012 Score=53.97 Aligned_cols=59 Identities=19% Similarity=0.242 Sum_probs=45.0
Q ss_pred EEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 125 IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 125 ~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
+.++.+++|..||......+.+.. +++++...+ +||...++. ..+.+.+.|.+-|++.+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~W----Pg~eVr~~e-gGHVsayl~-----k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIW----PGCEVRYLE-GGHVSAYLF-----KQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhC----CCCEEEEee-cCceeeeeh-----hchHHHHHHHHHHHhhh
Confidence 577889999999997667676654 678888888 799865543 25688888988887654
No 150
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.63 E-value=0.00039 Score=51.30 Aligned_cols=60 Identities=22% Similarity=0.286 Sum_probs=36.2
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHc-CCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKV-GAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
.|..+.....|...... .....+++... ..+++++.++ ++|.+++. + ...++.+.|.+||
T Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~--~---~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 169 VPITLFYALDDPLVSMD-RLEEADRWWDYTSGDVEVHDVP-GDHFSMLK--P---HVAEIAEKIAEWL 229 (229)
T ss_dssp SEEEEEEECSSSSSSHH-CGGHHCHHHGCBSSSEEEEEES-SETTGHHS--T---THHHHHHHHHHHH
T ss_pred CcEEEEecCCCccccch-hhhhHHHHHHhcCCCcEEEEEc-CCCcEecc--h---HHHHHHHHHhccC
Confidence 57888888888775443 11122223322 3467888888 49996553 2 3567777777665
No 151
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.63 E-value=0.00065 Score=49.70 Aligned_cols=140 Identities=19% Similarity=0.193 Sum_probs=75.3
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCH 82 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (224)
+|+..+++|+.+.. + .+++|+-.|..|-+|..++.. ..+.-++...|..++...+....
T Consensus 86 ~sL~~V~dwl~~~g----~--~~~GLIAaSLSaRIAy~Va~~---------------i~lsfLitaVGVVnlr~TLe~al 144 (294)
T PF02273_consen 86 ASLLTVIDWLATRG----I--RRIGLIAASLSARIAYEVAAD---------------INLSFLITAVGVVNLRDTLEKAL 144 (294)
T ss_dssp HHHHHHHHHHHHTT---------EEEEEETTHHHHHHHHTTT---------------S--SEEEEES--S-HHHHHHHHH
T ss_pred HHHHHHHHHHHhcC----C--CcchhhhhhhhHHHHHHHhhc---------------cCcceEEEEeeeeeHHHHHHHHh
Confidence 57888999998643 3 479999999999999988875 24666777778888877666554
Q ss_pred hcchhHHHHHhhccCCCCCCCCCc------------cccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHH
Q 027370 83 NRGLYRSIFLSIMEGEESLPVFSP------------AVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQK 150 (224)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~ 150 (224)
...+..........+ .......- ......++........+|++.+++++|.+|...+..++...+.
T Consensus 145 ~~Dyl~~~i~~lp~d-ldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~- 222 (294)
T PF02273_consen 145 GYDYLQLPIEQLPED-LDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNIN- 222 (294)
T ss_dssp SS-GGGS-GGG--SE-EEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-T-
T ss_pred ccchhhcchhhCCCc-ccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcC-
Confidence 444332222111111 00000000 0000011223333456899999999999987777776666552
Q ss_pred cCCccEEEEcCCCCCc
Q 027370 151 VGAKPELVLYPGKSHT 166 (224)
Q Consensus 151 ~~~~~~~~~~~~~~H~ 166 (224)
...++++..+|+.|.
T Consensus 223 -s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 223 -SNKCKLYSLPGSSHD 237 (294)
T ss_dssp -T--EEEEEETT-SS-
T ss_pred -CCceeEEEecCccch
Confidence 356899999999998
No 152
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.62 E-value=0.00079 Score=54.47 Aligned_cols=72 Identities=17% Similarity=0.299 Sum_probs=49.0
Q ss_pred cccCCCCCCEEEEeeCCCCccCchHHHHHHH-------HHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHH
Q 027370 116 RDASSLLPPIILFHGTSDYSIPSDASMAFAD-------ALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAV 188 (224)
Q Consensus 116 ~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~-------~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~f 188 (224)
-++..+.+|++++.|..|.++|++|+.-+.. .++..|...-+.+-+.-||.-++.+.. ...+-.+++.+-
T Consensus 291 ~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~~---VarkEH~~i~~~ 367 (581)
T PF11339_consen 291 VDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSGK---VARKEHREIASN 367 (581)
T ss_pred eehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEeccH---hhHHHHHHHHHH
Confidence 4556788999999999999999999955433 344555555666678899997776533 233444444444
Q ss_pred HH
Q 027370 189 IH 190 (224)
Q Consensus 189 l~ 190 (224)
|+
T Consensus 368 ld 369 (581)
T PF11339_consen 368 LD 369 (581)
T ss_pred HH
Confidence 43
No 153
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.56 E-value=0.00037 Score=55.46 Aligned_cols=92 Identities=18% Similarity=0.193 Sum_probs=49.1
Q ss_pred CCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCCCC
Q 027370 21 GDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEES 100 (224)
Q Consensus 21 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (224)
+|.++|+++|||.||..++.++.. ..++++.+.+-++.- ++.
T Consensus 225 lD~~~i~~~GHSFGGATa~~~l~~--------------d~r~~~~I~LD~W~~--Pl~---------------------- 266 (379)
T PF03403_consen 225 LDLSRIGLAGHSFGGATALQALRQ--------------DTRFKAGILLDPWMF--PLG---------------------- 266 (379)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHH---------------TT--EEEEES---T--TS-----------------------
T ss_pred cchhheeeeecCchHHHHHHHHhh--------------ccCcceEEEeCCccc--CCC----------------------
Confidence 566789999999999999988777 357777777665321 000
Q ss_pred CCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCch
Q 027370 101 LPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTD 167 (224)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 167 (224)
.... .....|+|+++++. .. .......+.+ +........+..+.|+.|..
T Consensus 267 -----~~~~---------~~i~~P~L~InSe~-f~-~~~~~~~~~~-~~~~~~~~~~~ti~gt~H~s 316 (379)
T PF03403_consen 267 -----DEIY---------SKIPQPLLFINSES-FQ-WWENIFRMKK-VISNNKESRMLTIKGTAHLS 316 (379)
T ss_dssp -----GGGG---------GG--S-EEEEEETT-T---HHHHHHHHT-T--TTS-EEEEEETT--GGG
T ss_pred -----cccc---------cCCCCCEEEEECcc-cC-ChhhHHHHHH-HhccCCCcEEEEECCCcCCC
Confidence 0000 11236999998775 22 1222222322 33344567889999999994
No 154
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.52 E-value=0.00011 Score=54.55 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=27.1
Q ss_pred CccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 153 AKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 153 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
.+.++.+++.+||+ +.. .....+...+..|+.++.
T Consensus 294 Gk~Q~~vL~~~GH~-v~E-----D~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 294 GKFQLQVLPLCGHF-VHE-----DSPHKVAECLCVFWIRNR 328 (343)
T ss_pred cceeeeeecccCce-ecc-----CCcchHHHHHHHHHhhhc
Confidence 46799999999999 222 245788899999998874
No 155
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.51 E-value=0.00031 Score=56.59 Aligned_cols=39 Identities=23% Similarity=0.321 Sum_probs=28.7
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
++.+.++++.+. ++++.+++.|+||||||++|..++...
T Consensus 102 ~la~lI~~L~~~---~gl~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 102 DVAKFVNWMQEE---FNYPWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred HHHHHHHHHHHh---hCCCCCcEEEEEECHHHHHHHHHHHhC
Confidence 345555655443 345567999999999999999988764
No 156
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.48 E-value=0.0015 Score=47.93 Aligned_cols=60 Identities=17% Similarity=0.203 Sum_probs=44.3
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
..+-+.+.+|..|.+||......+.+.+.+ .++++.+ .+..|.|+... .+.+.+.+.+.+
T Consensus 241 n~d~l~Fyygt~DgW~p~~~~d~~kdd~~e--ed~~Lde-dki~HAFV~~~------~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 241 NLDSLWFYYGTNDGWVPSHYYDYYKDDVPE--EDLKLDE-DKIPHAFVVKH------AQYMANAVFDMI 300 (301)
T ss_pred cCcEEEEEccCCCCCcchHHHHHHhhhcch--hceeecc-ccCCcceeecc------cHHHHHHHHHhh
Confidence 456889999999999998888888877743 3566666 78999976643 556666666543
No 157
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.41 E-value=0.00036 Score=51.31 Aligned_cols=55 Identities=16% Similarity=0.359 Sum_probs=39.2
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecc
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSG 70 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 70 (224)
....|++|+.+....++ .++++.|||.||++|.+++....... ..++..++...|
T Consensus 67 ~q~~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~~---------~~rI~~vy~fDg 121 (224)
T PF11187_consen 67 QQKSALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDEI---------QDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHHH---------hhheeEEEEeeC
Confidence 45678888887765443 35999999999999999988732211 246767776665
No 158
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.38 E-value=0.003 Score=45.60 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=28.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
++|+..++++|.-.. . ...|+++|||-|..-.++++.+
T Consensus 90 ~edl~~l~~Hi~~~~----f-St~vVL~GhSTGcQdi~yYlTn 127 (299)
T KOG4840|consen 90 VEDLKCLLEHIQLCG----F-STDVVLVGHSTGCQDIMYYLTN 127 (299)
T ss_pred HHHHHHHHHHhhccC----c-ccceEEEecCccchHHHHHHHh
Confidence 367777888775431 1 2379999999999999998843
No 159
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.24 E-value=0.00076 Score=50.52 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=30.1
Q ss_pred HHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 9 ISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 9 l~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
..|+.+.+++++++ ++++.+|||.|+-.|+.++..+
T Consensus 90 ~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~ 125 (297)
T PF06342_consen 90 QNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTH 125 (297)
T ss_pred HHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcC
Confidence 35666666777887 7999999999999999999886
No 160
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.21 E-value=0.0048 Score=46.60 Aligned_cols=61 Identities=15% Similarity=0.196 Sum_probs=43.1
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
..+|+|++.|+.-+. .+.+..+..++. ..++++..++++|=. .. ++...++.+.+.=|+.-
T Consensus 218 ~~c~vLlvvG~~Sp~--~~~vv~~ns~Ld--p~~ttllkv~dcGgl-V~-----eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 218 LGCPVLLVVGDNSPH--VDDVVEMNSKLD--PTKTTLLKVADCGGL-VL-----EEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp CCS-EEEEEETTSTT--HHHHHHHHHHS---CCCEEEEEETT-TT--HH-----HH-HHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCcc--hhhHHHHHhhcC--cccceEEEecccCCc-cc-----ccCcHHHHHHHHHHHcc
Confidence 448999999999866 678888888884 356889999988766 22 22467888888888763
No 161
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.19 E-value=0.00073 Score=45.80 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=26.5
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhh
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAV 47 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~ 47 (224)
..+.+.+..++++ ..+|.+.|||+||.+|..++.....
T Consensus 50 ~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 50 ILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhh
Confidence 3444444333333 3589999999999999998887543
No 162
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.10 E-value=0.00062 Score=52.65 Aligned_cols=144 Identities=15% Similarity=0.181 Sum_probs=82.9
Q ss_pred CcchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeec-ccccchhhhh
Q 027370 1 MVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLS-GGYNLLNLVD 79 (224)
Q Consensus 1 ~~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~ 79 (224)
|+.-+..|++-.++.+.++.++ ...|.|.|--|+.+.+.|... +++-+++... ...+....+.
T Consensus 213 Mv~a~srAMdlAq~eL~q~~Ik--~F~VTGaSKRgWttwLTAIaD--------------prv~aIvp~v~D~Lni~a~L~ 276 (507)
T COG4287 213 MVYAVSRAMDLAQDELEQVEIK--GFMVTGASKRGWTTWLTAIAD--------------PRVFAIVPFVYDNLNIEAQLL 276 (507)
T ss_pred HHHHHHHHHHHHHhhhhheeee--eEEEeccccchHHHHHHHhcC--------------cchhhhhhhHHhhcccHHHHH
Confidence 3445677888888888777776 899999999999999888874 3333333322 1111211111
Q ss_pred Hhhh-c---------chhHHHHHhhccCC---CCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHH
Q 027370 80 HCHN-R---------GLYRSIFLSIMEGE---ESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFAD 146 (224)
Q Consensus 80 ~~~~-~---------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~ 146 (224)
.... . .++.+.+....... ...+..+|...... ....+...|-+|+.|..|...+++.+..|++
T Consensus 277 hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~~IiDPlay~~t---ry~~RLalpKyivnaSgDdff~pDsa~lYyd 353 (507)
T COG4287 277 HIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLLEIIDPLAYRNT---RYQLRLALPKYIVNASGDDFFVPDSANLYYD 353 (507)
T ss_pred HHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHHHhhcHHHHhhh---hhhhhccccceeecccCCcccCCCccceeec
Confidence 1100 0 01111110000000 00111122221111 1112344699999999999999999999999
Q ss_pred HHHHcCCccEEEEcCCCCCc
Q 027370 147 ALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~H~ 166 (224)
.+ ...+-++.+|++.|.
T Consensus 354 ~L---PG~kaLrmvPN~~H~ 370 (507)
T COG4287 354 DL---PGEKALRMVPNDPHN 370 (507)
T ss_pred cC---CCceeeeeCCCCcch
Confidence 88 356789999999998
No 163
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.10 E-value=0.001 Score=53.90 Aligned_cols=23 Identities=13% Similarity=0.437 Sum_probs=20.1
Q ss_pred CcEEEEeeChhHHHHHHHHHhhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
++++|+||||||.++..++..++
T Consensus 162 ~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred CCEEEEEECHhHHHHHHHHHHCC
Confidence 48999999999999999887654
No 164
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.07 E-value=0.00019 Score=49.40 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=72.0
Q ss_pred CcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchh-HHHHHhhccCCCCCC
Q 027370 24 NRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLY-RSIFLSIMEGEESLP 102 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 102 (224)
....+.|-||||..|+.+..++ +..+.+++.++|.|+...+...+.....+ ..... + ...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrh-------------P~lftkvialSGvYdardffg~yyddDv~ynsP~d-y-----lpg 161 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRH-------------PHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSD-Y-----LPG 161 (227)
T ss_pred CCccccccchhhhhhhhhheeC-------------hhHhhhheeecceeeHHHhccccccCceeecChhh-h-----ccC
Confidence 4588899999999999999987 56788999999999988766554333221 11100 0 000
Q ss_pred CCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCch
Q 027370 103 VFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTD 167 (224)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 167 (224)
...|-....- ...-+.+..|..|+.. .+...+.+.+.....+..+.++.|-.|-+
T Consensus 162 ~~dp~~l~rl--------r~~~~vfc~G~e~~~L--~~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 162 LADPFRLERL--------RRIDMVFCIGDEDPFL--DNNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred CcChHHHHHH--------hhccEEEEecCccccc--cchHHHHHHhccccccHHHHHhccccccc
Confidence 0011111100 1135777888888774 45556666665555677778888877874
No 165
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.83 E-value=0.0022 Score=44.29 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=20.3
Q ss_pred CCcEEEEeeChhHHHHHHHHHhh
Q 027370 23 PNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
..+|.+.|||+||.+|..++...
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~ 49 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDL 49 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHH
Confidence 45899999999999999988775
No 166
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.77 E-value=0.0046 Score=50.80 Aligned_cols=69 Identities=17% Similarity=0.245 Sum_probs=53.9
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCC--------ccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGA--------KPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~--------~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
-++++.||..|.+||+..+..|++++.+.-. =.++..+||++|+..-.. ...-+.+..+.+|+++-..
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g----~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG----PDPFDALTALVDWVENGKA 429 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC----CCCCCHHHHHHHHHhCCCC
Confidence 3799999999999999999999999864321 278899999999943221 1244899999999998644
Q ss_pred h
Q 027370 195 E 195 (224)
Q Consensus 195 ~ 195 (224)
+
T Consensus 430 P 430 (474)
T PF07519_consen 430 P 430 (474)
T ss_pred C
Confidence 3
No 167
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.72 E-value=0.0014 Score=52.67 Aligned_cols=37 Identities=41% Similarity=0.710 Sum_probs=33.8
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHH
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSC 40 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~ 40 (224)
|..-|++|+++++..+|.|+++|.|+|.|+|+.-+..
T Consensus 198 DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~a 234 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVA 234 (601)
T ss_pred HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhh
Confidence 7788999999999999999999999999999977653
No 168
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.70 E-value=0.0037 Score=45.07 Aligned_cols=39 Identities=26% Similarity=0.359 Sum_probs=31.0
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.|+.+|.++-.++.. +. ..++|+|||+|+.+...++...
T Consensus 78 ~DV~~AF~~yL~~~n--~G--RPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 78 SDVRAAFDYYLANYN--NG--RPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHhcC--CC--CCEEEEEeChHHHHHHHHHHHH
Confidence 588888888877643 12 4799999999999999987764
No 169
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.65 E-value=0.054 Score=45.05 Aligned_cols=55 Identities=15% Similarity=0.053 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeeccccc
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYN 73 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 73 (224)
++|..+.|+||.++.. ...+|+++|.|.+|...+++|..+ ++.++.++...+..+
T Consensus 106 ~~Dg~D~I~Wia~QpW----sNG~Vgm~G~SY~g~tq~~~Aa~~-------------pPaLkai~p~~~~~D 160 (563)
T COG2936 106 AEDGYDTIEWLAKQPW----SNGNVGMLGLSYLGFTQLAAAALQ-------------PPALKAIAPTEGLVD 160 (563)
T ss_pred ccchhHHHHHHHhCCc----cCCeeeeecccHHHHHHHHHHhcC-------------Cchheeecccccccc
Confidence 5789999999999653 235799999999999999988875 456677776666554
No 170
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.59 E-value=0.046 Score=41.42 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=45.7
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
.++|+|++.|+.-+. .+....+..++. ...+.+..+.++|=. +.+++..++.+.+.=|+.-.
T Consensus 245 lkc~vllvvGd~Sp~--~~~vv~~n~~Ld--p~~ttllk~~d~g~l------~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 245 LKCPVLLVVGDNSPH--VSAVVECNSKLD--PTYTTLLKMADCGGL------VQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred ccccEEEEecCCCch--hhhhhhhhcccC--cccceEEEEcccCCc------ccccCchHHHHHHHHHHccC
Confidence 458999999999866 566777777663 346788888888776 33345778888888888753
No 171
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.54 E-value=0.0036 Score=53.17 Aligned_cols=40 Identities=20% Similarity=0.381 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcccc-cCCC---CCcEEEEeeChhHHHHHHHHHh
Q 027370 5 VSQGISFVFNNIAD-YGGD---PNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 5 ~~~al~~l~~~~~~-~~~~---~~~i~l~G~S~GG~la~~~a~~ 44 (224)
+.+|+++|.+..+. ...+ |.-|+++||||||.+|-.++..
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 45677788766543 1233 5669999999999999766544
No 172
>PLN02408 phospholipase A1
Probab=96.48 E-value=0.004 Score=48.91 Aligned_cols=37 Identities=19% Similarity=0.370 Sum_probs=25.4
Q ss_pred HHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 9 ISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 9 l~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
++.|.+..++++....+|++.|||+||.+|...|..-
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3444444444443334699999999999999988764
No 173
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.48 E-value=0.0071 Score=46.03 Aligned_cols=121 Identities=11% Similarity=0.177 Sum_probs=69.6
Q ss_pred CCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhcchhHHHHHhhccCCC
Q 027370 20 GGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEE 99 (224)
Q Consensus 20 ~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (224)
+++.+++.|+|||.||..+...... ...++..|.+.++.
T Consensus 237 nl~~s~~aViGHSFGgAT~i~~ss~--------------~t~FrcaI~lD~WM--------------------------- 275 (399)
T KOG3847|consen 237 NLDTSQAAVIGHSFGGATSIASSSS--------------HTDFRCAIALDAWM--------------------------- 275 (399)
T ss_pred chhhhhhhheeccccchhhhhhhcc--------------ccceeeeeeeeeee---------------------------
Confidence 3677899999999999988766554 24566666554421
Q ss_pred CCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhh----------
Q 027370 100 SLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLF---------- 169 (224)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---------- 169 (224)
-|.... .......|+|++. .+|.. ..++....+++...+..-.+..+.|+-|-...
T Consensus 276 -----~Pl~~~------~~~~arqP~~fin-v~~fQ--~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i 341 (399)
T KOG3847|consen 276 -----FPLDQL------QYSQARQPTLFIN-VEDFQ--WNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWI 341 (399)
T ss_pred -----cccchh------hhhhccCCeEEEE-ccccc--chhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHH
Confidence 011000 0111235899888 44432 33445555555444445588889999997211
Q ss_pred ---h--cCCCC--CCccHHHHHHHHHHHhhChh
Q 027370 170 ---L--QDPLR--GGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 170 ---~--~~~~~--~~~~~~~~~i~~fl~~~~~~ 195 (224)
+ +.+.+ +.-+-.++..++||+++...
T Consensus 342 ~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~d~ 374 (399)
T KOG3847|consen 342 GKVFKVKGETDPYEAMQIAIRASLAFLQKHLDL 374 (399)
T ss_pred HHHhccCCCCChHHHHHHHHHHHHHHHHhhhhh
Confidence 1 11111 11244567788899887543
No 174
>PLN02454 triacylglycerol lipase
Probab=96.47 E-value=0.0046 Score=49.27 Aligned_cols=21 Identities=33% Similarity=0.502 Sum_probs=18.7
Q ss_pred cEEEEeeChhHHHHHHHHHhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~ 45 (224)
+|++.|||+||.+|+..|..-
T Consensus 229 sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHH
Confidence 599999999999999988654
No 175
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.30 E-value=0.0064 Score=45.00 Aligned_cols=22 Identities=27% Similarity=0.428 Sum_probs=19.6
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.++++.|||+||.+|..++...
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHH
Confidence 4799999999999999888764
No 176
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.22 E-value=0.0055 Score=47.90 Aligned_cols=28 Identities=36% Similarity=0.551 Sum_probs=22.0
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
..+++.+++.|+|||+||++|..++...
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~ 171 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYL 171 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHT
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhc
Confidence 4568889999999999999999887764
No 177
>PLN02571 triacylglycerol lipase
Probab=96.19 E-value=0.0073 Score=48.19 Aligned_cols=21 Identities=24% Similarity=0.411 Sum_probs=18.8
Q ss_pred cEEEEeeChhHHHHHHHHHhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~ 45 (224)
+|++.|||+||.+|...|...
T Consensus 227 sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDI 247 (413)
T ss_pred cEEEeccchHHHHHHHHHHHH
Confidence 699999999999999988764
No 178
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.10 E-value=0.0087 Score=48.02 Aligned_cols=43 Identities=19% Similarity=0.390 Sum_probs=29.2
Q ss_pred CCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccc
Q 027370 23 PNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGY 72 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 72 (224)
.++++|+||||||.++..++....... |....|+.++.+++++
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~-------W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEE-------WKDKYIKRFISIGTPF 160 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchh-------hHHhhhhEEEEeCCCC
Confidence 468999999999999998877653210 1123466666666544
No 179
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.09 E-value=0.011 Score=43.51 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=25.8
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
..+++|.+..........+|.++|||+||.++-.+...
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHHH
Confidence 34556655554444444589999999999998655543
No 180
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.01 E-value=0.14 Score=39.89 Aligned_cols=128 Identities=14% Similarity=0.149 Sum_probs=70.4
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhhhHhhhc
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNR 84 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (224)
+.++++++.+.. . .+++|+||+.|+.+++.+..... ...+.++|.++.............
T Consensus 180 i~Aa~~~~~~~~----~--~~ivlIg~G~gA~~~~~~la~~~------------~~~~daLV~I~a~~p~~~~n~~l~-- 239 (310)
T PF12048_consen 180 IEAAIAFAQQQG----G--KNIVLIGHGTGAGWAARYLAEKP------------PPMPDALVLINAYWPQPDRNPALA-- 239 (310)
T ss_pred HHHHHHHHHhcC----C--ceEEEEEeChhHHHHHHHHhcCC------------CcccCeEEEEeCCCCcchhhhhHH--
Confidence 344555555432 2 36999999999999999988753 234667777776322211100000
Q ss_pred chhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCccCchHHHHHHHHHHH--cCCccEEEEcCC
Q 027370 85 GLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQK--VGAKPELVLYPG 162 (224)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~vp~~~~~~~~~~l~~--~~~~~~~~~~~~ 162 (224)
..+.....|+|=+++.+... ........+.+.. .....+-..+.+
T Consensus 240 -------------------------------~~la~l~iPvLDi~~~~~~~--~~~~a~~R~~~a~r~~~~~YrQ~~L~~ 286 (310)
T PF12048_consen 240 -------------------------------EQLAQLKIPVLDIYSADNPA--SQQTAKQRKQAAKRNKKPDYRQIQLPG 286 (310)
T ss_pred -------------------------------HHhhccCCCEEEEecCCChH--HHHHHHHHHHHHHhccCCCceeEecCC
Confidence 01112237999888777322 1122222222211 223455566667
Q ss_pred CCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 163 KSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 163 ~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..|.... ..+.+.+.|..||.++
T Consensus 287 ~~~~~~~-------~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 287 LPDNPSG-------WQEQLLRRIRGWLKRH 309 (310)
T ss_pred CCCChhh-------HHHHHHHHHHHHHHhh
Confidence 6665211 1344999999999875
No 181
>PLN02802 triacylglycerol lipase
Probab=96.00 E-value=0.0098 Score=48.47 Aligned_cols=37 Identities=24% Similarity=0.271 Sum_probs=24.8
Q ss_pred HHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 9 ISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 9 l~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
++-+.+..+++....-+|+|.|||+||.+|...+..-
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3334443334433323799999999999999888654
No 182
>PLN02324 triacylglycerol lipase
Probab=95.93 E-value=0.011 Score=47.19 Aligned_cols=21 Identities=29% Similarity=0.336 Sum_probs=18.7
Q ss_pred cEEEEeeChhHHHHHHHHHhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~ 45 (224)
+|++.|||+||.+|.+.|..-
T Consensus 216 sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHH
Confidence 699999999999999888653
No 183
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=95.90 E-value=0.011 Score=48.89 Aligned_cols=73 Identities=25% Similarity=0.322 Sum_probs=51.7
Q ss_pred CCCEEEEeeCCCCccCchH-HHHHHHHHHHc-C--CccEEEEcCCCCCchhhhc--------CCCCCCccHHHHHHHHHH
Q 027370 122 LPPIILFHGTSDYSIPSDA-SMAFADALQKV-G--AKPELVLYPGKSHTDLFLQ--------DPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~-~~~~~~~l~~~-~--~~~~~~~~~~~~H~~~~~~--------~~~~~~~~~~~~~i~~fl 189 (224)
-.|++|+||+.|.++|..+ ++.|+...+.. | ...++++++++.|++.+.. .|+.....+.++.|..+|
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L 634 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHL 634 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHh
Confidence 4699999999999999964 45565554432 2 3688999999999986643 233333466777788888
Q ss_pred HhhCh
Q 027370 190 HANDK 194 (224)
Q Consensus 190 ~~~~~ 194 (224)
.....
T Consensus 635 ~~G~~ 639 (690)
T PF10605_consen 635 KSGAA 639 (690)
T ss_pred hcCCC
Confidence 87543
No 184
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.87 E-value=0.021 Score=44.47 Aligned_cols=65 Identities=17% Similarity=0.227 Sum_probs=42.3
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchhhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLV 78 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 78 (224)
+++..+.+|.+... .++|+|++||||.++++..+.+-..+.... ....++.++..++-.+..-+.
T Consensus 176 aLe~~lr~La~~~~-----~~~I~ilAHSMGtwl~~e~LrQLai~~~~~-----l~~ki~nViLAaPDiD~DVF~ 240 (377)
T COG4782 176 ALERLLRYLATDKP-----VKRIYLLAHSMGTWLLMEALRQLAIRADRP-----LPAKIKNVILAAPDIDVDVFS 240 (377)
T ss_pred HHHHHHHHHHhCCC-----CceEEEEEecchHHHHHHHHHHHhccCCcc-----hhhhhhheEeeCCCCChhhHH
Confidence 45666777766532 358999999999999998766543332221 135677778777766554443
No 185
>PLN02719 triacylglycerol lipase
Probab=95.71 E-value=0.019 Score=46.93 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=19.3
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
-+|.+.|||+||.+|...|..-
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHH
Confidence 4799999999999999988654
No 186
>PLN02761 lipase class 3 family protein
Probab=95.70 E-value=0.015 Score=47.60 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=19.1
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
-+|++.|||+||.+|...|..-
T Consensus 294 ~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHH
Confidence 3799999999999999888653
No 187
>PLN02753 triacylglycerol lipase
Probab=95.70 E-value=0.019 Score=47.03 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=25.7
Q ss_pred HHHHHHhcccccCC---CCCcEEEEeeChhHHHHHHHHHhh
Q 027370 8 GISFVFNNIADYGG---DPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 8 al~~l~~~~~~~~~---~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
+++.|++...+++. ..-+|++.|||+||.+|+..|..-
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 34444444444432 234799999999999999988653
No 188
>PLN02310 triacylglycerol lipase
Probab=95.61 E-value=0.017 Score=45.97 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=18.7
Q ss_pred CcEEEEeeChhHHHHHHHHHh
Q 027370 24 NRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~ 44 (224)
-+|.+.|||+||.+|+..+..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 379999999999999988865
No 189
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.54 E-value=0.0072 Score=49.77 Aligned_cols=48 Identities=27% Similarity=0.342 Sum_probs=44.0
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhh
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFL 170 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 170 (224)
..||+.|+.+..|+. .+.+.-|+++++..|..+.+.+.++..|+|..+
T Consensus 786 qLPp~~i~ac~mDP~--LDD~vmfA~kLr~lG~~v~l~vle~lPHGFLnf 833 (880)
T KOG4388|consen 786 QLPPVHIVACAMDPM--LDDSVMFARKLRNLGQPVTLRVLEDLPHGFLNF 833 (880)
T ss_pred cCCCceEEEeccCcc--hhHHHHHHHHHHhcCCceeehhhhcCCccceeH
Confidence 678999999999988 789999999999999999999999999997554
No 190
>PLN00413 triacylglycerol lipase
Probab=95.52 E-value=0.023 Score=46.01 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=18.6
Q ss_pred CcEEEEeeChhHHHHHHHHHh
Q 027370 24 NRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~ 44 (224)
.++++.|||+||.+|...+..
T Consensus 284 ~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 284 SKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CeEEEEecCHHHHHHHHHHHH
Confidence 479999999999999988764
No 191
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.51 E-value=0.026 Score=40.06 Aligned_cols=67 Identities=18% Similarity=0.243 Sum_probs=51.1
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcC-CccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVG-AKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
.++|-|=|+.|.++...|+..-.+-+.... .....++.+|+||..++.+.- ..+++...|.+|+.++
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~r---wr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSR---WREEIYPRIREFIRQH 202 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchh---hhhhhhHHHHHHHHhC
Confidence 578889999999999998887776664322 235667789999997776654 3678888999998763
No 192
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=95.31 E-value=0.04 Score=40.43 Aligned_cols=21 Identities=19% Similarity=0.392 Sum_probs=17.4
Q ss_pred cEEEEeeChhHHHHHHHHHhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~ 45 (224)
+|-|+||||||.++-++....
T Consensus 76 kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHHC
T ss_pred EEEEEEcCCcCHHHHHHHHHc
Confidence 899999999999998887643
No 193
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.25 E-value=0.051 Score=44.37 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=36.4
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccc
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGY 72 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 72 (224)
+.|+...++++..... ..+..+++++|.|.||++|+++-...+ ..+.+.+..+++.
T Consensus 93 LaD~a~F~~~~~~~~~--~~~~~pwI~~GgSY~G~Laaw~r~kyP-------------~~~~ga~ASSapv 148 (434)
T PF05577_consen 93 LADLAYFIRYVKKKYN--TAPNSPWIVFGGSYGGALAAWFRLKYP-------------HLFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHHHHHHHHHTT--TGCC--EEEEEETHHHHHHHHHHHH-T-------------TT-SEEEEET--C
T ss_pred HHHHHHHHHHHHHhhc--CCCCCCEEEECCcchhHHHHHHHhhCC-------------CeeEEEEecccee
Confidence 5688888888875432 123458999999999999999988874 4555565555433
No 194
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.20 E-value=0.029 Score=45.98 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=19.0
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
-+|+|.|||+||.+|+..|..-
T Consensus 318 ~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHH
Confidence 3699999999999999888653
No 195
>PLN02162 triacylglycerol lipase
Probab=94.99 E-value=0.039 Score=44.66 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=18.3
Q ss_pred CcEEEEeeChhHHHHHHHHHh
Q 027370 24 NRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~ 44 (224)
.++++.|||+||.+|..++..
T Consensus 278 ~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 278 LKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred ceEEEEecChHHHHHHHHHHH
Confidence 479999999999999987653
No 196
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=94.92 E-value=0.11 Score=37.27 Aligned_cols=23 Identities=17% Similarity=0.319 Sum_probs=19.5
Q ss_pred CcEEEEeeChhHHHHHHHHHhhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
.++.++|||+||.++..++....
T Consensus 64 ~~~~l~g~s~Gg~~a~~~a~~l~ 86 (212)
T smart00824 64 RPFVLVGHSSGGLLAHAVAARLE 86 (212)
T ss_pred CCeEEEEECHHHHHHHHHHHHHH
Confidence 46999999999999988887643
No 197
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.83 E-value=0.071 Score=43.89 Aligned_cols=65 Identities=17% Similarity=0.084 Sum_probs=48.4
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHH-----------------cC---------C-----ccEEEEcCCCCCchhhh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQK-----------------VG---------A-----KPELVLYPGKSHTDLFL 170 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~-----------------~~---------~-----~~~~~~~~~~~H~~~~~ 170 (224)
..++||.+|+.|.+|+.-..+++.+.++= .+ . +.++..+.++||+-...
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 46999999999999999888888877740 01 1 45666778999983332
Q ss_pred cCCCCCCccHHHHHHHHHHHhh
Q 027370 171 QDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 171 ~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..+++.+.+..|+...
T Consensus 444 ------~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 444 ------QPAVALTMINRFLRNR 459 (462)
T ss_pred ------HHHHHHHHHHHHHcCC
Confidence 3678888999998653
No 198
>PLN02934 triacylglycerol lipase
Probab=94.81 E-value=0.041 Score=44.99 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=18.6
Q ss_pred CcEEEEeeChhHHHHHHHHHh
Q 027370 24 NRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~ 44 (224)
.++++.|||+||.+|..++..
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CeEEEeccccHHHHHHHHHHH
Confidence 489999999999999988754
No 199
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=94.79 E-value=0.21 Score=46.64 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=19.6
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.++.++|||+||.++..++.+.
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l 1154 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARL 1154 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHH
Confidence 3799999999999999998864
No 200
>PF03283 PAE: Pectinacetylesterase
Probab=94.60 E-value=0.12 Score=41.01 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=28.2
Q ss_pred HHHHHHHHHhc-ccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 5 VSQGISFVFNN-IADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 5 ~~~al~~l~~~-~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
+.++++||.++ . -++++|+|.|.|+||.-++..+-.
T Consensus 140 ~~avl~~l~~~gl----~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 140 LRAVLDDLLSNGL----PNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHhcC----cccceEEEeccChHHHHHHHHHHH
Confidence 56788898886 3 246799999999999988866544
No 201
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=94.58 E-value=0.15 Score=37.91 Aligned_cols=49 Identities=14% Similarity=0.046 Sum_probs=31.1
Q ss_pred CCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccch
Q 027370 23 PNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLL 75 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 75 (224)
..+|.|++||||+.+.+.+.......... +.....+..++...+-++..
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~----~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGER----PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccc----hhhHhhhheEEEECCCCCHH
Confidence 45899999999999999876654322211 00013566777777655543
No 202
>PLN02847 triacylglycerol lipase
Probab=94.34 E-value=0.05 Score=45.35 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=18.4
Q ss_pred cEEEEeeChhHHHHHHHHHhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~ 45 (224)
++++.|||+||.+|..++...
T Consensus 252 kLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred eEEEeccChHHHHHHHHHHHH
Confidence 799999999999999887653
No 203
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.31 E-value=0.06 Score=42.76 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=35.6
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccC
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKEST 51 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~ 51 (224)
+.|....+.++++. ++....+|+.+|.|.||++++++=+..++...+
T Consensus 148 LADfA~ll~~lK~~---~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~G 194 (492)
T KOG2183|consen 148 LADFAELLTFLKRD---LSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLG 194 (492)
T ss_pred HHHHHHHHHHHhhc---cccccCcEEEecCchhhHHHHHHHhcChhhhhh
Confidence 35677777777765 345567899999999999999988877655544
No 204
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.29 E-value=0.56 Score=34.24 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=25.5
Q ss_pred EEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCc
Q 027370 126 ILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 126 lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 166 (224)
..+.|++|.+.|++..+.+.+. .+.+..+ +++|.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~------~~~~~~~-~~~Hy 202 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQG------RCTIVEI-DAPHY 202 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhC------cCcEEEe-cCCCc
Confidence 4788999999999888877653 1345555 47998
No 205
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=94.26 E-value=0.11 Score=40.51 Aligned_cols=52 Identities=19% Similarity=0.102 Sum_probs=38.1
Q ss_pred HHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccc
Q 027370 6 SQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNL 74 (224)
Q Consensus 6 ~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 74 (224)
..+++|..+ .++..++.|++.|+|-||.-++++|... +.+++++.....-|+
T Consensus 296 DaVvQfAI~---~Lgf~~edIilygWSIGGF~~~waAs~Y--------------PdVkavvLDAtFDDl 347 (517)
T KOG1553|consen 296 DAVVQFAIQ---VLGFRQEDIILYGWSIGGFPVAWAASNY--------------PDVKAVVLDATFDDL 347 (517)
T ss_pred HHHHHHHHH---HcCCCccceEEEEeecCCchHHHHhhcC--------------CCceEEEeecchhhh
Confidence 345555555 4567788999999999999999999874 567777776653333
No 206
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.95 E-value=0.092 Score=41.33 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=20.4
Q ss_pred cEEEEeeChhHHHHHHHHHhhhhc
Q 027370 25 RIYLMGQSAGAHISSCALLEQAVK 48 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~~~~ 48 (224)
+|.+.|||+||.+|...|..-...
T Consensus 172 ~i~vTGHSLGgAlA~laa~~i~~~ 195 (336)
T KOG4569|consen 172 SIWVTGHSLGGALASLAALDLVKN 195 (336)
T ss_pred EEEEecCChHHHHHHHHHHHHHHc
Confidence 799999999999999988765433
No 207
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=93.38 E-value=0.12 Score=45.08 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=21.2
Q ss_pred CCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 21 GDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 21 ~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.+..+++++||||||.++..++...
T Consensus 552 ~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred CCCCcEEEEecCHHHHHHHHHHHhc
Confidence 3456899999999999999998763
No 208
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=93.23 E-value=0.17 Score=42.11 Aligned_cols=43 Identities=30% Similarity=0.417 Sum_probs=37.1
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
++++.-|+-|+.++..-+|-..+||+++|+|+||++...++++
T Consensus 447 leEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 447 LEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred HHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHH
Confidence 4677889999999988888888999999999999998766654
No 209
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=92.67 E-value=0.25 Score=38.96 Aligned_cols=40 Identities=25% Similarity=0.245 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhh
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
..+...++.+.....+. +++.++||||||.++.+++....
T Consensus 110 ~~ql~~~V~~~l~~~ga--~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 110 GEQLFAYVDEVLAKTGA--KKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred HHHHHHHHHHHHhhcCC--CceEEEeecccchhhHHHHhhcC
Confidence 34555666665554444 58999999999999998777643
No 210
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.63 E-value=0.12 Score=38.86 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=20.1
Q ss_pred cEEEEeeChhHHHHHHHHHhhhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQAV 47 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~~~ 47 (224)
.+.|.|+|+||++|..+|.+-..
T Consensus 66 Py~L~G~S~GG~vA~evA~qL~~ 88 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQLEA 88 (257)
T ss_pred CEEEEeeccccHHHHHHHHHHHh
Confidence 69999999999999999887543
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=92.62 E-value=0.16 Score=41.18 Aligned_cols=24 Identities=17% Similarity=0.140 Sum_probs=20.8
Q ss_pred CcEEEEeeChhHHHHHHHHHhhhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQAV 47 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~~~ 47 (224)
++++|++|||||.+.++++..+..
T Consensus 182 kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 182 KKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred CceEEEecCCccHHHHHHHhcccc
Confidence 589999999999999998876544
No 212
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=91.74 E-value=0.24 Score=41.57 Aligned_cols=21 Identities=10% Similarity=0.034 Sum_probs=18.5
Q ss_pred CcEEEEeeChhHHHHHHHHHh
Q 027370 24 NRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~ 44 (224)
++++|+||||||.+++.+...
T Consensus 213 kKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 213 KKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CeEEEEEeCCchHHHHHHHHh
Confidence 589999999999999988763
No 213
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=91.25 E-value=0.44 Score=33.88 Aligned_cols=40 Identities=25% Similarity=0.199 Sum_probs=26.4
Q ss_pred CcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecc
Q 027370 24 NRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSG 70 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 70 (224)
.+++|+|.|+|+.++..++..... ......++.+++.+..
T Consensus 81 ~kivl~GYSQGA~V~~~~~~~~~l-------~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 81 TKIVLAGYSQGAMVVGDALSGDGL-------PPDVADRIAAVVLFGD 120 (179)
T ss_dssp SEEEEEEETHHHHHHHHHHHHTTS-------SHHHHHHEEEEEEES-
T ss_pred CCEEEEecccccHHHHHHHHhccC-------ChhhhhhEEEEEEecC
Confidence 489999999999999988766100 0001356667766654
No 214
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=91.20 E-value=4.3 Score=30.42 Aligned_cols=67 Identities=15% Similarity=0.040 Sum_probs=42.2
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCC-ccEEEEcCCCCCchhhhcCCCCCCcc--HHHHHHHHHHHhhC
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGA-KPELVLYPGKSHTDLFLQDPLRGGKD--DLFDHIIAVIHAND 193 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~--~~~~~i~~fl~~~~ 193 (224)
..+++|-=.+|.+ +++..+.+.++.... -++....+ ++|.....++..-...+ .-.+.+..|+++..
T Consensus 164 ~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~-G~HLTPl~q~~~~~~g~~ftP~da~~q~~k~~~ 233 (250)
T PF07082_consen 164 RRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLP-GNHLTPLGQDLKWQVGSSFTPLDAVGQWLKQEV 233 (250)
T ss_pred ccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCC-CCCCCcCcCCcCCccCCccCchHHHHHHHHHHH
Confidence 4677777777766 889999888875433 35666666 68985443322111122 33677888887754
No 215
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=91.07 E-value=0.73 Score=36.82 Aligned_cols=34 Identities=35% Similarity=0.558 Sum_probs=24.2
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHH
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCA 41 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~ 41 (224)
.|....+++..++ |+. .++.|+|.|+|+-+--..
T Consensus 310 ~Dl~r~i~~y~~~---w~~--~~~~liGySfGADvlP~~ 343 (456)
T COG3946 310 ADLSRLIRFYARR---WGA--KRVLLIGYSFGADVLPFA 343 (456)
T ss_pred HHHHHHHHHHHHh---hCc--ceEEEEeecccchhhHHH
Confidence 4666666666653 444 489999999999876543
No 216
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.91 E-value=0.28 Score=37.17 Aligned_cols=22 Identities=36% Similarity=0.483 Sum_probs=19.6
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.+|.+.|||.||.+|.++..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 4899999999999999888774
No 217
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.91 E-value=0.28 Score=37.17 Aligned_cols=22 Identities=36% Similarity=0.483 Sum_probs=19.6
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.+|.+.|||.||.+|.++..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 4899999999999999888774
No 218
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.86 E-value=0.85 Score=35.96 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=56.5
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
.+.+.+.+..|.++|.++.++|++..++.|.+++..-+.++-|...+-. ......+.+.+|+++...
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~-----~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRS-----FPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeecc-----CcHHHHHHHHHHHHhccc
Confidence 4678888999999999999999988888899999999999999953333 357899999999998643
No 219
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.70 E-value=0.59 Score=34.55 Aligned_cols=26 Identities=27% Similarity=0.318 Sum_probs=21.3
Q ss_pred CCCcEEEEeeChhHHHHHHHHHhhhh
Q 027370 22 DPNRIYLMGQSAGAHISSCALLEQAV 47 (224)
Q Consensus 22 ~~~~i~l~G~S~GG~la~~~a~~~~~ 47 (224)
..++++|+|+|+|+.++...+.+...
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 44689999999999999988776543
No 220
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=89.40 E-value=1.3 Score=35.91 Aligned_cols=63 Identities=13% Similarity=0.087 Sum_probs=43.3
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHc----------------------CCccEEEEcCCCCCchhhhcCCCCCCcc
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKV----------------------GAKPELVLYPGKSHTDLFLQDPLRGGKD 179 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 179 (224)
..++||.+|..|.+||.-.++.+.+++.=. ..+.++..+.++||+-..-+ .+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dq------P~ 403 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQ------PE 403 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHS------HH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhC------HH
Confidence 368999999999999999999998887410 02456788899999933322 56
Q ss_pred HHHHHHHHHHH
Q 027370 180 DLFDHIIAVIH 190 (224)
Q Consensus 180 ~~~~~i~~fl~ 190 (224)
+..+.+.+||+
T Consensus 404 ~a~~m~~~fl~ 414 (415)
T PF00450_consen 404 AALQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 88888888875
No 221
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=88.36 E-value=0.83 Score=36.84 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=43.0
Q ss_pred CCCEEEEeeCCCCccCchH-HHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 122 LPPIILFHGTSDYSIPSDA-SMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..|++|+.|.-|.+ .++ ...+.+.+...|..+-....||.|+.. ..++.+..+.+.+.|++||...
T Consensus 189 p~P~VIv~gGlDs~--qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~---~~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSL--QEDLYRLFRDYLAPRGIAMLTVDMPGQGESP---KWPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS---GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT---TT-S-S-CCHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchh--HHHHHHHHHHHHHhCCCEEEEEccCCCcccc---cCCCCcCHHHHHHHHHHHHhcC
Confidence 35999999999987 544 444445566778888888899999872 3345566789999999999875
No 222
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=88.11 E-value=0.99 Score=37.00 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=31.1
Q ss_pred HHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 9 ISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 9 l~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
++-|++.++.+|.+.+.++|.|.|||-.-|++++...
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 4455666678899999999999999999999998763
No 223
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=87.16 E-value=1.4 Score=31.28 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=19.0
Q ss_pred CCcEEEEeeChhHHHHHHHHHh
Q 027370 23 PNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~ 44 (224)
..++.++|||+|..++...+..
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhh
Confidence 4589999999999999887665
No 224
>PLN02633 palmitoyl protein thioesterase family protein
Probab=86.27 E-value=2.1 Score=33.19 Aligned_cols=52 Identities=13% Similarity=0.346 Sum_probs=33.5
Q ss_pred CccCchHHHHHHH------HHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhChh
Q 027370 134 YSIPSDASMAFAD------ALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDKE 195 (224)
Q Consensus 134 ~~vp~~~~~~~~~------~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 195 (224)
.++|.++...|.+ .+.+. ..+.++..+| .|.. + ..+.+.+.+..||.++...
T Consensus 243 ~vvpl~et~lY~eD~iGLktLD~~-GkL~f~~v~G-~Hl~-~-------s~~~~~~~i~pyL~~~~~~ 300 (314)
T PLN02633 243 HLLSVQQTKLYTEDWIGLKTLDDA-GKVKFVSVPG-GHLI-M-------ADEDVVKYVVPYLQDQQSA 300 (314)
T ss_pred eeechhhcchhhhhhhhHHHHHHC-CCeEEEecCC-chhh-c-------CHHHHHHHHHHHhhccchh
Confidence 4666666666655 22333 3578888887 5983 2 1457788899999876543
No 225
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=85.98 E-value=1.8 Score=35.87 Aligned_cols=41 Identities=20% Similarity=0.392 Sum_probs=27.0
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
+|+..+++...+...++ ...+++|+|+|+||..+..++..-
T Consensus 152 ~d~~~~l~~f~~~~p~~--~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDL--RANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred HHHHHHHHHHHHhCccc--cCCCEEEEeecchhhhHHHHHHHH
Confidence 34444554433333333 335899999999999998887664
No 226
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=85.42 E-value=1.5 Score=33.99 Aligned_cols=37 Identities=24% Similarity=0.400 Sum_probs=28.3
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHH
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~ 43 (224)
+-+..|+.++..+.+ .. ++|+++|+|-|++.+=.+|.
T Consensus 105 ~nI~~AYrFL~~~ye--pG--D~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 105 QNIREAYRFLIFNYE--PG--DEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHHHHHHhcC--CC--CeEEEeeccchhHHHHHHHH
Confidence 456788888888764 23 48999999999999865553
No 227
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=85.41 E-value=2.2 Score=33.38 Aligned_cols=64 Identities=17% Similarity=0.213 Sum_probs=48.7
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHc---------------C-----Cc-cEEEEcCCCCCchhhhcCCCCCCccH
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKV---------------G-----AK-PELVLYPGKSHTDLFLQDPLRGGKDD 180 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 180 (224)
..++||..|+.|.+|+.-.++.+.+.+.-. | .+ .++..+.++||+- .. ..++
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV-~~------qP~~ 305 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA-EY------RPNE 305 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCC-Cc------CHHH
Confidence 369999999999999999999999888511 1 12 6667777999982 11 3678
Q ss_pred HHHHHHHHHHhh
Q 027370 181 LFDHIIAVIHAN 192 (224)
Q Consensus 181 ~~~~i~~fl~~~ 192 (224)
.++-+.+|+...
T Consensus 306 al~m~~~fi~~~ 317 (319)
T PLN02213 306 TFIMFQRWISGQ 317 (319)
T ss_pred HHHHHHHHHcCC
Confidence 888899998753
No 228
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=84.92 E-value=1.7 Score=33.15 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=17.3
Q ss_pred CcEEEEeeChhHHHHHHHHHhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~ 45 (224)
+-+.++|+|+||.+.=.++.+-
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c 101 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRC 101 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-
T ss_pred cceeeeeeccccHHHHHHHHHC
Confidence 3599999999999987777764
No 229
>PLN02606 palmitoyl-protein thioesterase
Probab=84.48 E-value=3.1 Score=32.18 Aligned_cols=23 Identities=9% Similarity=0.075 Sum_probs=18.7
Q ss_pred CcEEEEeeChhHHHHHHHHHhhh
Q 027370 24 NRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
+-+.++|+|+||.+.=.++.+.+
T Consensus 95 ~G~naIGfSQGglflRa~ierc~ 117 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCD 117 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCC
Confidence 35899999999999887777643
No 230
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=84.11 E-value=0.78 Score=36.82 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=40.9
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
...+|+|+|++|+. .+..|. +.+...+..+.+.||++|+..+ .........+....|.+|-.=
T Consensus 351 ~~rmlFVYG~nDPW----~A~~f~--l~~g~~ds~v~~~PggnHga~I-~~L~~~~r~~a~a~l~~WaGv 413 (448)
T PF05576_consen 351 GPRMLFVYGENDPW----SAEPFR--LGKGKRDSYVFTAPGGNHGARI-AGLPEAERAEATARLRRWAGV 413 (448)
T ss_pred CCeEEEEeCCCCCc----ccCccc--cCCCCcceEEEEcCCCcccccc-cCCCHHHHHHHHHHHHHHcCC
Confidence 34699999999976 333331 1112356777788999999443 333344566777788888763
No 231
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=82.06 E-value=2.7 Score=32.20 Aligned_cols=36 Identities=31% Similarity=0.455 Sum_probs=26.7
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHH
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~ 43 (224)
.+..++.++.++.+ .. ++|+++|.|-|+..|=.++.
T Consensus 76 ~I~~ay~~l~~~~~--~g--d~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 76 RIRDAYRFLSKNYE--PG--DRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred HHHHHHHHHHhccC--Cc--ceEEEEecCccHHHHHHHHH
Confidence 45677778766653 22 48999999999999876664
No 232
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=81.26 E-value=5.7 Score=23.74 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=28.0
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.+.+-++|+++...- -.|+++.|+|-|-|=.+|..+++..
T Consensus 22 ~V~~qI~yvk~~~~~--~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 22 NVENQIEYVKSQGKI--NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHC-----TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC--CCCceEEEEecCCcccHHHHHHHHh
Confidence 466778888875532 2357999999999999998887763
No 233
>PLN02209 serine carboxypeptidase
Probab=80.93 E-value=3.9 Score=33.62 Aligned_cols=63 Identities=19% Similarity=0.211 Sum_probs=48.7
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHc---------------C-----Cc-cEEEEcCCCCCchhhhcCCCCCCccH
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKV---------------G-----AK-PELVLYPGKSHTDLFLQDPLRGGKDD 180 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 180 (224)
..++||..|+.|.+|+.-.++.+.+.++=. | .+ .++..+.++||+- .. ..++
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV-p~------qP~~ 423 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-EY------LPEE 423 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc-Cc------CHHH
Confidence 358999999999999999999999888511 1 22 6677788899982 21 4678
Q ss_pred HHHHHHHHHHh
Q 027370 181 LFDHIIAVIHA 191 (224)
Q Consensus 181 ~~~~i~~fl~~ 191 (224)
.++-+.+|+..
T Consensus 424 al~m~~~fi~~ 434 (437)
T PLN02209 424 SSIMFQRWISG 434 (437)
T ss_pred HHHHHHHHHcC
Confidence 89999999865
No 234
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=80.66 E-value=4.4 Score=33.29 Aligned_cols=64 Identities=17% Similarity=0.213 Sum_probs=48.9
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHc---------------C-----Cc-cEEEEcCCCCCchhhhcCCCCCCccH
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKV---------------G-----AK-PELVLYPGKSHTDLFLQDPLRGGKDD 180 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 180 (224)
..++||..|+.|.+||.-.++.+.+.++=. | .+ .++..+.++||+- .. ..++
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmV-p~------qP~~ 419 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA-EY------RPNE 419 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCC-CC------CHHH
Confidence 469999999999999999999998887411 1 12 6667788899982 11 3678
Q ss_pred HHHHHHHHHHhh
Q 027370 181 LFDHIIAVIHAN 192 (224)
Q Consensus 181 ~~~~i~~fl~~~ 192 (224)
.++-+..|+..+
T Consensus 420 al~m~~~Fi~~~ 431 (433)
T PLN03016 420 TFIMFQRWISGQ 431 (433)
T ss_pred HHHHHHHHHcCC
Confidence 899999998754
No 235
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=80.37 E-value=1.7 Score=35.76 Aligned_cols=43 Identities=26% Similarity=0.342 Sum_probs=33.2
Q ss_pred chHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 3 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
+|+..+.+.+.+...++.-..++.+|+|.|.||+-+..+|..-
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 5777777777776666554446899999999999998887653
No 236
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=79.75 E-value=2 Score=33.01 Aligned_cols=71 Identities=14% Similarity=0.181 Sum_probs=51.5
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCC-ccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhChhH
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGA-KPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHANDKEA 196 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 196 (224)
+-.+-+-||+|.+.-..|+++-.+-+..-.. ..+.+.-++.||.-++.+.. ..+++...|.+|+.+++...
T Consensus 340 ~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsr---fr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 340 VALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSR---FREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred eeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccch---HHHHHHHHHHHHHHHhCccc
Confidence 4578889999999887787776665532211 24567779999997665544 36788999999999987643
No 237
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=76.06 E-value=11 Score=29.87 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=27.3
Q ss_pred CcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccc
Q 027370 24 NRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGY 72 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 72 (224)
.+|.|+|||+|+-+....+..-..+.. ...+..++.+.++.
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~--------~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKA--------FGLVENVVLMGAPV 260 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccc--------cCeEeeEEEecCCC
Confidence 469999999999999887766443311 23355666665543
No 238
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=75.99 E-value=6.7 Score=32.37 Aligned_cols=64 Identities=11% Similarity=0.175 Sum_probs=46.3
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcC---------------------CccEEEEcCCCCCchhhhcCCCCCCccHH
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVG---------------------AKPELVLYPGKSHTDLFLQDPLRGGKDDL 181 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 181 (224)
.+++|..|+.|.+||.-.++.+.+.+.-.. .+..+..+.|+||+-... ..++.
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~------~p~~a 437 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYD------KPESA 437 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCC------CcHHH
Confidence 689999999999999988888877663110 013446677999982222 25677
Q ss_pred HHHHHHHHHhh
Q 027370 182 FDHIIAVIHAN 192 (224)
Q Consensus 182 ~~~i~~fl~~~ 192 (224)
..-+.+|+..+
T Consensus 438 l~m~~~fl~g~ 448 (454)
T KOG1282|consen 438 LIMFQRFLNGQ 448 (454)
T ss_pred HHHHHHHHcCC
Confidence 88899999875
No 239
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=75.72 E-value=5.4 Score=29.70 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=25.8
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
-+++++.++ ++.++.-.+.|-|+|+.++..++...
T Consensus 16 GVl~~L~e~----gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 16 GVLSLLIEA----GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHc----CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 356666654 35444568999999999999988764
No 240
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=75.64 E-value=14 Score=22.15 Aligned_cols=62 Identities=19% Similarity=0.245 Sum_probs=36.9
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHH
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVI 189 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl 189 (224)
.=++|+||-.+.. ..-..+++.+.+.|. .+..+.--||+...-..-..+..+++.+++..|+
T Consensus 17 ~~v~i~HG~~eh~---~ry~~~a~~L~~~G~--~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 17 AVVVIVHGFGEHS---GRYAHLAEFLAEQGY--AVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred EEEEEeCCcHHHH---HHHHHHHHHHHhCCC--EEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4588999987744 334456666765554 5556666677732211112234677788877776
No 241
>PLN02209 serine carboxypeptidase
Probab=74.76 E-value=6.5 Score=32.36 Aligned_cols=67 Identities=13% Similarity=0.016 Sum_probs=37.1
Q ss_pred HHHHHHHHHhcccccC-CCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccc
Q 027370 5 VSQGISFVFNNIADYG-GDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNL 74 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~-~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 74 (224)
+.+.+++|+.....++ ....+++|+|.|.||..+..+|..-........ ...-.+++++...|..+.
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~---~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICC---NPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhccccc---CCceeeeeEEecCcccCh
Confidence 3444555544333221 233479999999999988877765322211000 012356777777765543
No 242
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=74.70 E-value=5.2 Score=31.37 Aligned_cols=49 Identities=14% Similarity=0.063 Sum_probs=29.1
Q ss_pred CCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeeccccc
Q 027370 22 DPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYN 73 (224)
Q Consensus 22 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 73 (224)
...+.+|.|.|.||..+..+|..-....... ....-.++|+....|..+
T Consensus 49 ~~~~fyI~GESYaG~YiP~la~~I~~~n~~~---~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 49 FSNPLYVVGDSYSGMIVPALVQEISQGNYIC---CEPPINLQGYMLGNPVTY 97 (319)
T ss_pred ccCCeEEEeeccccchHHHHHHHHHhhcccc---cCCceeeeEEEeCCCCCC
Confidence 4457999999999999888776532211100 001234666666655443
No 243
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=73.32 E-value=6.1 Score=32.68 Aligned_cols=42 Identities=12% Similarity=0.095 Sum_probs=29.8
Q ss_pred cchHHHHHHHHHhcccccCCC-CCcEEEEeeChhHHHHHHHHHhhh
Q 027370 2 VKDVSQGISFVFNNIADYGGD-PNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~-~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
+.|+...|+.+... ++.. +.+.+.+|.|.-|.+++++=...+
T Consensus 152 LaDla~fI~~~n~k---~n~~~~~~WitFGgSYsGsLsAW~R~~yP 194 (514)
T KOG2182|consen 152 LADLAEFIKAMNAK---FNFSDDSKWITFGGSYSGSLSAWFREKYP 194 (514)
T ss_pred HHHHHHHHHHHHhh---cCCCCCCCeEEECCCchhHHHHHHHHhCc
Confidence 45666666666543 3333 248999999999999999877654
No 244
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=70.38 E-value=5 Score=32.46 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=39.1
Q ss_pred HHHHHHHHHhcccccC-CCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccch
Q 027370 5 VSQGISFVFNNIADYG-GDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLL 75 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~-~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 75 (224)
+.+..++|+.....++ ....+++|+|.|.||..+..+|..-......... ..-.+++++...|..+..
T Consensus 116 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~---~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 116 AEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQ---PKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--S---TTSEEEEEEEESE-SBHH
T ss_pred HHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccc---cccccccceecCcccccc
Confidence 3444444444433222 2334899999999999998877654333222111 134578888877766553
No 245
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=65.00 E-value=16 Score=28.23 Aligned_cols=41 Identities=20% Similarity=0.248 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhh
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
+.+-++|......-- -.|+|+.++|.|.|=.++...+....
T Consensus 24 V~~QI~y~k~~gp~~-ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 24 VLQQIDYVKAAGPIK-NGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHhcCCcc-CCCceEEEEecCCcccHHHHHHHHhC
Confidence 455677777654322 24689999999999999999887754
No 246
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.62 E-value=14 Score=31.50 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=18.5
Q ss_pred CCcEEEEeeChhHHHHHHHHHhh
Q 027370 23 PNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
...|+-+||||||.++=.+++..
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred CCceEEEecccchHHHHHHHHHH
Confidence 45799999999998887766653
No 247
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=64.09 E-value=12 Score=28.15 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=22.5
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
-+++.+.+....+ ..+ .+.|-|+|+.++..++..
T Consensus 17 GVl~aL~e~g~~~--~~d--~i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 17 GVAVCLKKYAPHL--LLN--KISGASAGALAACCLLCD 50 (245)
T ss_pred HHHHHHHHhCccc--CCC--eEEEEcHHHHHHHHHHhC
Confidence 3556666653211 122 399999999999988865
No 248
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=63.83 E-value=7.9 Score=31.83 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=28.2
Q ss_pred CCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccc
Q 027370 23 PNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGY 72 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 72 (224)
..+++|+|.|.||..+..+|..-....... ....-.++|+....|..
T Consensus 164 ~~~~yi~GESYaG~yvP~la~~i~~~n~~~---~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQEISQGNYIC---CEPPINLQGYMLGNPVT 210 (433)
T ss_pred CCCEEEEccCccceehHHHHHHHHhhcccc---cCCcccceeeEecCCCc
Confidence 457999999999998887776532211100 00123466666666544
No 249
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.01 E-value=7.9 Score=28.38 Aligned_cols=26 Identities=8% Similarity=0.221 Sum_probs=22.5
Q ss_pred CCCCcEEEEeeChhHHHHHHHHHhhh
Q 027370 21 GDPNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 21 ~~~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
..++.++++.||.||...+.++.+.+
T Consensus 187 a~~~sv~vvahsyGG~~t~~l~~~f~ 212 (297)
T KOG3967|consen 187 AKAESVFVVAHSYGGSLTLDLVERFP 212 (297)
T ss_pred cCcceEEEEEeccCChhHHHHHHhcC
Confidence 45678999999999999999988764
No 250
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=61.90 E-value=14 Score=30.34 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=19.7
Q ss_pred CCCCCcEEEEeeChhHHHHHHHHHhhh
Q 027370 20 GGDPNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 20 ~~~~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
++.+ -++.|.|+|+.+++.++....
T Consensus 99 gl~p--~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 99 NLLP--RIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred CCCC--CEEEEECHHHHHHHHHHcCCH
Confidence 4554 379999999999998887543
No 251
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=60.72 E-value=28 Score=26.65 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=17.6
Q ss_pred CCcEEEEeeChhHHHHHHHHHh
Q 027370 23 PNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~ 44 (224)
++-+.++|.|+||.++=.++..
T Consensus 91 sqGynivg~SQGglv~Raliq~ 112 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQF 112 (296)
T ss_pred cCceEEEEEccccHHHHHHHHh
Confidence 3468999999999888766655
No 252
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=59.84 E-value=18 Score=26.72 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=22.7
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
.+++.+.+. ++.+ -.++|.|+|+.+++.++..
T Consensus 17 GvL~aL~e~----gi~~--~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 17 GFLAALLEM----GLEP--SAISGTSAGALVGGLFASG 48 (221)
T ss_pred HHHHHHHHc----CCCc--eEEEEeCHHHHHHHHHHcC
Confidence 345555543 4443 4699999999999988863
No 253
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=57.93 E-value=10 Score=27.10 Aligned_cols=32 Identities=22% Similarity=0.129 Sum_probs=22.9
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
.+++.+.+. ++.+ -.+.|-|+||.+++.++..
T Consensus 16 Gvl~~L~e~----~~~~--d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 16 GALKALEEA----GILK--KRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHHc----CCCc--ceEEEECHHHHHHHHHHcC
Confidence 345555443 3443 6799999999999988864
No 254
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=55.40 E-value=4.8 Score=32.32 Aligned_cols=17 Identities=24% Similarity=0.526 Sum_probs=14.4
Q ss_pred CcEEEEeeChhHHHHHH
Q 027370 24 NRIYLMGQSAGAHISSC 40 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~ 40 (224)
++|.++|||.||.++-.
T Consensus 150 ~kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARY 166 (405)
T ss_pred ceeeeeeeecCCeeeeE
Confidence 48999999999977653
No 255
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=54.48 E-value=46 Score=20.08 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=20.9
Q ss_pred CCCCEEEEeeCCCCccCchHHHHHHHHHHH
Q 027370 121 LLPPIILFHGTSDYSIPSDASMAFADALQK 150 (224)
Q Consensus 121 ~~~P~lii~g~~D~~vp~~~~~~~~~~l~~ 150 (224)
..||++++.+.+...++....+-+.+.+++
T Consensus 37 ~~PPtFv~f~N~~~~~~~sY~ryL~n~lRe 66 (80)
T PF14714_consen 37 TRPPTFVLFVNDPELLPESYKRYLENQLRE 66 (80)
T ss_dssp TTTTEEEEEES-CCC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 458999999998888887777766666654
No 256
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=54.03 E-value=12 Score=29.34 Aligned_cols=18 Identities=22% Similarity=0.370 Sum_probs=15.9
Q ss_pred EEEEeeChhHHHHHHHHH
Q 027370 26 IYLMGQSAGAHISSCALL 43 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~ 43 (224)
=.+.|.|+||.+++.++.
T Consensus 34 D~i~GTStGgiIA~~la~ 51 (312)
T cd07212 34 DWIAGTSTGGILALALLH 51 (312)
T ss_pred cEEEeeChHHHHHHHHHc
Confidence 368999999999999886
No 257
>PRK10279 hypothetical protein; Provisional
Probab=53.98 E-value=23 Score=27.57 Aligned_cols=31 Identities=16% Similarity=0.106 Sum_probs=22.7
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
+++.+.+. ++. --.++|.|+|+.++..++..
T Consensus 23 VL~aL~E~----gi~--~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 23 VINALKKV----GIE--IDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHHHc----CCC--cCEEEEEcHHHHHHHHHHcC
Confidence 45555443 455 36799999999999998864
No 258
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=53.32 E-value=30 Score=28.70 Aligned_cols=58 Identities=16% Similarity=0.070 Sum_probs=33.7
Q ss_pred HHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeeccccc
Q 027370 10 SFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYN 73 (224)
Q Consensus 10 ~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 73 (224)
+|+.+..+ .....++|.|.|.+|+.+..+|..--...... ....-.++|+..-.|..+
T Consensus 157 ~wf~kfPe---y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~---~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 157 KWFEKFPE---YKSNDFYIAGESYAGHYVPALAQEILKGNKKC---CKPNINLKGYAIGNGLTD 214 (454)
T ss_pred HHHHhChh---hcCCCeEEecccccceehHHHHHHHHhccccc---cCCcccceEEEecCcccC
Confidence 45554432 33447999999999998887776532222111 111245677766666544
No 259
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=50.80 E-value=16 Score=25.66 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=22.8
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
+++.+.+. ++. -=.+.|.|+|+.+++.++...
T Consensus 18 vl~~L~e~----g~~--~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 18 VLRALEEE----GIE--IDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHC----CCC--eeEEEEeCHHHHHHHHHHcCC
Confidence 45555543 343 357999999999999888653
No 260
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=50.49 E-value=15 Score=25.61 Aligned_cols=20 Identities=30% Similarity=0.174 Sum_probs=16.4
Q ss_pred cEEEEeeChhHHHHHHHHHh
Q 027370 25 RIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~ 44 (224)
--.+.|-|.||.+++.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 35699999999999887765
No 261
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=49.78 E-value=17 Score=25.40 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=23.8
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.+++.+.+. ++. .-.+.|-|+|+.++..++...
T Consensus 15 Gvl~aL~e~----gi~--~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 15 GVAKALRER----GPL--IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHc----CCC--CCEEEEECHHHHHHHHHHcCC
Confidence 345556554 344 467999999999999888753
No 262
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=49.35 E-value=16 Score=28.53 Aligned_cols=31 Identities=26% Similarity=0.099 Sum_probs=22.2
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
+++.+.+. |+. --.++|.|+|+.++..++..
T Consensus 33 vL~aLee~----gi~--~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEA----GIP--VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHc----CCC--CCEEEEECHHHHHHHHHHcC
Confidence 34444443 454 35789999999999998865
No 263
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=49.09 E-value=18 Score=25.34 Aligned_cols=32 Identities=19% Similarity=0.057 Sum_probs=23.1
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
.++++|.+. ++.+ -.+.|.|+|+.++..++..
T Consensus 17 Gvl~~L~~~----~~~~--d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 17 GVLKALEEA----GIPI--DIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHHc----CCCe--eEEEEECHHHHHHHHHHcC
Confidence 455666554 3433 4799999999999988864
No 264
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=48.12 E-value=62 Score=20.60 Aligned_cols=53 Identities=19% Similarity=0.288 Sum_probs=32.5
Q ss_pred chHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 138 SDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 138 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
+..+..|.+-++..|.++++.. .+.++..+++.++ +.-+++...+..|+.+..
T Consensus 10 ~r~AqaF~DYl~sqgI~~~i~~-~~~~~~~lwl~de--~~~~~a~~el~~Fl~nP~ 62 (101)
T PF12122_consen 10 PRAAQAFIDYLASQGIELQIEP-EGQGQFALWLHDE--EHLEQAEQELEEFLQNPN 62 (101)
T ss_dssp HHHHHHHHHHHHHTT--EEEE--SSSE--EEEES-G--GGHHHHHHHHHHHHHS-S
T ss_pred HHHHHHHHHHHHHCCCeEEEEE-CCCCceEEEEeCH--HHHHHHHHHHHHHHHCCC
Confidence 4688999999988887777666 4455554554322 245677888889998764
No 265
>COG4566 TtrR Response regulator [Signal transduction mechanisms]
Probab=48.11 E-value=41 Score=24.28 Aligned_cols=53 Identities=13% Similarity=0.282 Sum_probs=28.9
Q ss_pred CCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 133 DYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 133 D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
|-..|--.+.++.+++.+.|...-++++ .||+++-+. -+++-.-..+||.+..
T Consensus 55 DvrMPg~sGlelq~~L~~~~~~~PVIfi--TGhgDIpma------V~AmK~GAvDFLeKP~ 107 (202)
T COG4566 55 DVRMPGMSGLELQDRLAERGIRLPVIFL--TGHGDIPMA------VQAMKAGAVDFLEKPF 107 (202)
T ss_pred ecCCCCCchHHHHHHHHhcCCCCCEEEE--eCCCChHHH------HHHHHcchhhHHhCCC
Confidence 4445556666666666666655555555 456654332 3344444555555543
No 266
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=47.91 E-value=35 Score=28.56 Aligned_cols=46 Identities=20% Similarity=0.207 Sum_probs=36.9
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHHHhhhhcccCCCCCCccccccceeeeecccccchh
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLN 76 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 76 (224)
-|+-.+++-+..|-|-||--++..|.+. +..+.+++.-.+..++..
T Consensus 109 ~Yg~~p~~sY~~GcS~GGRqgl~~AQry-------------P~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 109 FYGKAPKYSYFSGCSTGGRQGLMAAQRY-------------PEDFDGILAGAPAINWTH 154 (474)
T ss_pred HhCCCCCceEEEEeCCCcchHHHHHHhC-------------hhhcCeEEeCCchHHHHH
Confidence 3567788999999999999999999987 466777777777665544
No 267
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=47.80 E-value=18 Score=27.61 Aligned_cols=23 Identities=22% Similarity=0.122 Sum_probs=18.6
Q ss_pred CCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 20 GGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 20 ~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
++. -=.+.|.|+|+.++..++..
T Consensus 36 gi~--~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 36 GIP--IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred CCC--ccEEEEECHHHHHHHHHHcC
Confidence 454 35689999999999999865
No 268
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=47.63 E-value=1.1e+02 Score=22.60 Aligned_cols=122 Identities=19% Similarity=0.321 Sum_probs=63.6
Q ss_pred cchHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHH-HhhhhcccCCCCCCcccccc-ceee-eecccccchhhh
Q 027370 2 VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCAL-LEQAVKESTGESISWSASHI-KYYF-GLSGGYNLLNLV 78 (224)
Q Consensus 2 ~~D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a-~~~~~~~~~~~~~~~~~~~i-~~~~-~~~~~~~~~~~~ 78 (224)
.+|+...++.|++....++-+ +.++++||..--.....++ +.+-.. ...+ ..++ ...+...+....
T Consensus 117 k~DYe~~v~aik~~~ppl~k~-e~~vlmgHGt~h~s~~~YacLd~~~~----------~~~f~~v~v~~ve~yP~~d~vi 185 (265)
T COG4822 117 KNDYEICVEAIKDQIPPLNKD-EILVLMGHGTDHHSNAAYACLDHVLD----------EYGFDNVFVAAVEGYPLVDTVI 185 (265)
T ss_pred hhhHHHHHHHHHHhcCCcCcC-eEEEEEecCCCccHHHHHHHHHHHHH----------hcCCCceEEEEecCCCcHHHHH
Confidence 368888999998877644433 5788999865544443333 222111 1122 1122 223322333333
Q ss_pred hHhhhcchhHHHHHhhccCCCCCCCCCccccccCCCccccCCCCCCEEEEeeCCCCc-cCchHHHHHHHHHHHcCCccEE
Q 027370 79 DHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYS-IPSDASMAFADALQKVGAKPEL 157 (224)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~-vp~~~~~~~~~~l~~~~~~~~~ 157 (224)
........ ..+ ...|.+++.|++-.. .-.+....+...+.+.|.+++.
T Consensus 186 ~~l~~~~~------------~~v-------------------~L~PlMlvAG~Ha~nDMasddedswk~il~~~G~~v~~ 234 (265)
T COG4822 186 EYLRKNGI------------KEV-------------------HLIPLMLVAGDHAKNDMASDDEDSWKNILEKNGFKVEV 234 (265)
T ss_pred HHHHHcCC------------ceE-------------------EEeeeEEeechhhhhhhcccchHHHHHHHHhCCceeEE
Confidence 33322111 000 125999998875322 1234457788888888887754
Q ss_pred EEcCCCCCc
Q 027370 158 VLYPGKSHT 166 (224)
Q Consensus 158 ~~~~~~~H~ 166 (224)
++ .|.|-.
T Consensus 235 ~l-~GLGE~ 242 (265)
T COG4822 235 YL-HGLGEN 242 (265)
T ss_pred Ee-ecCCCc
Confidence 43 455554
No 269
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=46.45 E-value=19 Score=27.09 Aligned_cols=25 Identities=16% Similarity=0.573 Sum_probs=18.8
Q ss_pred HHHHHHHHhcccccCCCCCcEEEEeeCh
Q 027370 6 SQGISFVFNNIADYGGDPNRIYLMGQSA 33 (224)
Q Consensus 6 ~~al~~l~~~~~~~~~~~~~i~l~G~S~ 33 (224)
..|++|+.+. ++++.++++++|.|-
T Consensus 167 ~~Al~~L~~~---~~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 167 GAALRYLMER---WGIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHH---HT--GGGEEEEESSG
T ss_pred HHHHHHHHHH---hCCCHHHEEEEeCCC
Confidence 4688999884 468888999999994
No 270
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=46.41 E-value=20 Score=27.18 Aligned_cols=34 Identities=21% Similarity=0.046 Sum_probs=23.4
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.+++.+.+.. +. .-=.++|.|+|+.+++.++...
T Consensus 15 Gvl~al~e~~----~~-~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 15 GVLDAFLEAG----IR-PFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHHcC----CC-CCCEEEEECHHHHhHHHHHhCC
Confidence 3555665542 32 1237899999999999888754
No 271
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=46.34 E-value=19 Score=27.62 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=18.6
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHHH
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a~ 43 (224)
.+|+.| -.++|||+|-..|+.++.
T Consensus 78 ~~Gi~p--~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 78 SWGVRP--DAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HcCCcc--cEEEecCHHHHHHHHHhC
Confidence 456764 689999999988887664
No 272
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=45.81 E-value=28 Score=29.64 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=20.3
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
.+|+.| -+++|||+|=..++.++.-
T Consensus 261 ~~GI~P--dav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 261 EFAIKP--DFALGYSKGEASMWASLGV 285 (538)
T ss_pred hcCCCC--CEEeecCHHHHHHHHHhCC
Confidence 567875 5899999999998877754
No 273
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=45.47 E-value=1.1e+02 Score=25.16 Aligned_cols=67 Identities=18% Similarity=0.122 Sum_probs=38.1
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
..|++|++|..|.... +.-..+.+.+.+.|..+-...++|.|.. . ..+...........+++|+...
T Consensus 193 ~~P~Vli~gG~~~~~~-~~~~~~~~~La~~Gy~vl~~D~pG~G~s--~-~~~~~~d~~~~~~avld~l~~~ 259 (414)
T PRK05077 193 PFPTVLVCGGLDSLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFS--S-KWKLTQDSSLLHQAVLNALPNV 259 (414)
T ss_pred CccEEEEeCCcccchh-hhHHHHHHHHHhCCCEEEEECCCCCCCC--C-CCCccccHHHHHHHHHHHHHhC
Confidence 3689999998885411 2234456666666766555556654433 1 1122222344557788888764
No 274
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.47 E-value=21 Score=26.09 Aligned_cols=32 Identities=16% Similarity=0.043 Sum_probs=23.1
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
+++.+.+. ++. --.+.|.|+|+.+++.++...
T Consensus 16 vl~aL~e~----g~~--~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 16 VLKALAEA----GIE--PDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHc----CCC--CCEEEEECHHHHHHHHHHcCC
Confidence 45555554 333 347999999999999988764
No 275
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=45.18 E-value=1.2e+02 Score=23.59 Aligned_cols=18 Identities=39% Similarity=0.580 Sum_probs=14.8
Q ss_pred CcEEEEeeChhHHHHHHH
Q 027370 24 NRIYLMGQSAGAHISSCA 41 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~ 41 (224)
-|++|+|.|.|++-+...
T Consensus 109 PkL~l~GeSLGa~g~~~a 126 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAA 126 (289)
T ss_pred CeEEEeccCccccchhhh
Confidence 489999999999877543
No 276
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=45.01 E-value=18 Score=28.13 Aligned_cols=18 Identities=33% Similarity=0.346 Sum_probs=15.6
Q ss_pred EEEEeeChhHHHHHHHHH
Q 027370 26 IYLMGQSAGAHISSCALL 43 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~ 43 (224)
=.+.|.|.||.+|+.++.
T Consensus 43 Dli~GTStGgiiA~~la~ 60 (308)
T cd07211 43 DYICGVSTGAILAFLLGL 60 (308)
T ss_pred CEEEecChhHHHHHHHhc
Confidence 358999999999998875
No 277
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=43.86 E-value=23 Score=27.23 Aligned_cols=24 Identities=13% Similarity=-0.038 Sum_probs=18.5
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHHH
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a~ 43 (224)
.+|+. ...++|||+|-..|+.++.
T Consensus 72 ~~g~~--P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 72 ALLPR--PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred hcCCC--CcEEeecCHHHHHHHHHhC
Confidence 44664 5789999999988887664
No 278
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=43.50 E-value=22 Score=27.40 Aligned_cols=19 Identities=32% Similarity=0.288 Sum_probs=16.5
Q ss_pred EEEEeeChhHHHHHHHHHh
Q 027370 26 IYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~ 44 (224)
=.+.|.|.||.+++.++..
T Consensus 36 D~i~GTSaGaiia~~la~g 54 (288)
T cd07213 36 DLFAGTSAGSLIALGLALG 54 (288)
T ss_pred eEEEEeCHHHHHHHHHHcC
Confidence 4789999999999998764
No 279
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=43.38 E-value=22 Score=27.17 Aligned_cols=24 Identities=21% Similarity=0.133 Sum_probs=18.2
Q ss_pred ccC-CCCCcEEEEeeChhHHHHHHHHH
Q 027370 18 DYG-GDPNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 18 ~~~-~~~~~i~l~G~S~GG~la~~~a~ 43 (224)
+++ +. .-.++|||+|=..|+.++.
T Consensus 78 ~~g~i~--p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 78 EQGGLK--PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HcCCCC--CCEEeecCHHHHHHHHHhC
Confidence 344 65 4689999999988877664
No 280
>COG1647 Esterase/lipase [General function prediction only]
Probab=42.95 E-value=62 Score=24.11 Aligned_cols=41 Identities=20% Similarity=0.308 Sum_probs=31.7
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCc
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 166 (224)
.-+|++||=--. ....+.+.+.+++.|-.|..=.|||-||.
T Consensus 16 ~AVLllHGFTGt---~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~ 56 (243)
T COG1647 16 RAVLLLHGFTGT---PRDVRMLGRYLNENGYTVYAPRYPGHGTL 56 (243)
T ss_pred EEEEEEeccCCC---cHHHHHHHHHHHHCCceEecCCCCCCCCC
Confidence 468999987663 26788899999988887777778876665
No 281
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=42.19 E-value=22 Score=29.03 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=17.2
Q ss_pred EEEEeeChhHHHHHHHHHhh
Q 027370 26 IYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~~ 45 (224)
-++.|.|+|+.+++.++...
T Consensus 97 ~iI~GtSAGAivaalla~~t 116 (407)
T cd07232 97 NVISGTSGGSLVAALLCTRT 116 (407)
T ss_pred CEEEEECHHHHHHHHHHcCC
Confidence 45999999999999998754
No 282
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=42.10 E-value=27 Score=27.15 Aligned_cols=23 Identities=26% Similarity=0.185 Sum_probs=19.0
Q ss_pred CCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 20 GGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 20 ~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
++. .-.|.|.|+|+.++..+|..
T Consensus 37 gi~--~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 37 GIP--IDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred CCC--ccEEEecCHHHHHHHHHHcC
Confidence 454 47799999999999998864
No 283
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=41.87 E-value=29 Score=26.02 Aligned_cols=20 Identities=30% Similarity=0.356 Sum_probs=17.1
Q ss_pred EEEEeeChhHHHHHHHHHhh
Q 027370 26 IYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~~ 45 (224)
-.++|-|+|+.++..++...
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 38999999999999888653
No 284
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=41.67 E-value=15 Score=28.70 Aligned_cols=54 Identities=15% Similarity=0.194 Sum_probs=34.3
Q ss_pred CEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 124 PIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 124 P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
--.++.|+.+ ..+++.+.+++.+..++..-...+-|.. + -+...+.+.+++...
T Consensus 157 ~q~visG~~~------~l~~~~~~l~~~~~~~~~l~v~~afHs~-~--------m~~~~~~~~~~l~~~ 210 (318)
T PF00698_consen 157 RQVVISGERE------ALEALVERLKAEGIKAKRLPVSYAFHSP-L--------MEPAADEFREALESI 210 (318)
T ss_dssp TEEEEEEEHH------HHHHHHHHHHHTTSEEEEESSSSETTSG-G--------GHHHHHHHHHHHHTS
T ss_pred cccccCCCHH------HHHHHHHHhhccceeEEEeeeeccccCc-h--------hhhhHHHHHhhhhcc
Confidence 3456666554 5566777777777666666677777772 1 246666777777663
No 285
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=41.06 E-value=28 Score=23.92 Aligned_cols=18 Identities=33% Similarity=0.549 Sum_probs=15.9
Q ss_pred cEEEEeeChhHHHHHHHH
Q 027370 25 RIYLMGQSAGAHISSCAL 42 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a 42 (224)
--.+.|.|+|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 467899999999999887
No 286
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=41.05 E-value=25 Score=28.00 Aligned_cols=18 Identities=33% Similarity=0.634 Sum_probs=15.9
Q ss_pred EEEEeeChhHHHHHHHHH
Q 027370 26 IYLMGQSAGAHISSCALL 43 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~ 43 (224)
=.+.|.|.||.+|+.++.
T Consensus 43 DlIaGTStGgIIAa~la~ 60 (344)
T cd07217 43 DFVGGTSTGSIIAACIAL 60 (344)
T ss_pred cEEEEecHHHHHHHHHHc
Confidence 378999999999999875
No 287
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=37.28 E-value=33 Score=27.18 Aligned_cols=18 Identities=17% Similarity=-0.112 Sum_probs=14.9
Q ss_pred EEEEeeChhHHHHHHHHH
Q 027370 26 IYLMGQSAGAHISSCALL 43 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~ 43 (224)
-+++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999988887764
No 288
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=37.11 E-value=27 Score=26.31 Aligned_cols=19 Identities=26% Similarity=0.254 Sum_probs=16.3
Q ss_pred EEEEeeChhHHHHHHHHHh
Q 027370 26 IYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~ 44 (224)
=.+.|.|.||.+|+.++..
T Consensus 36 d~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 36 DLIAGTSTGGIIALGLALG 54 (258)
T ss_pred ceeeeccHHHHHHHHHhcC
Confidence 3589999999999988765
No 289
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=36.89 E-value=1.9e+02 Score=21.98 Aligned_cols=42 Identities=14% Similarity=0.213 Sum_probs=26.5
Q ss_pred CCEEEEeeCCCCcc-CchHHHHHHHHHHHcCCccEEEEcCCCCCc
Q 027370 123 PPIILFHGTSDYSI-PSDASMAFADALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 123 ~P~lii~g~~D~~v-p~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 166 (224)
++++++||..+..+ .......+++.+.+.|..+-...++ ||+
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~--G~G 69 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYR--GMG 69 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCC--CCC
Confidence 57888998877553 2233456677777666655555555 555
No 290
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.64 E-value=25 Score=27.44 Aligned_cols=17 Identities=24% Similarity=0.169 Sum_probs=15.0
Q ss_pred EEEeeChhHHHHHHHHH
Q 027370 27 YLMGQSAGAHISSCALL 43 (224)
Q Consensus 27 ~l~G~S~GG~la~~~a~ 43 (224)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 78999999999998763
No 291
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.19 E-value=38 Score=25.49 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=22.1
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHH
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~ 43 (224)
-+++.+.+....+ -.+--.+.|-|+|+.++..++.
T Consensus 16 GVl~~L~e~g~~l--~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRHGKKL--LKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHcCchh--hccCCEEEEECHHHHHHHHHhc
Confidence 3556666543211 0012379999999999999874
No 292
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=34.60 E-value=31 Score=27.55 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=16.3
Q ss_pred EEEEeeChhHHHHHHHHHh
Q 027370 26 IYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~ 44 (224)
=.+.|.|.||.+|+.++..
T Consensus 45 DliaGTStGgiiA~~la~~ 63 (349)
T cd07214 45 DVIAGTSTGGLITAMLTAP 63 (349)
T ss_pred CEEeeCCHHHHHHHHHhcC
Confidence 3689999999999988864
No 293
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=33.17 E-value=82 Score=23.32 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcccc-cCCCCCcEEEEeeChhHHH
Q 027370 5 VSQGISFVFNNIAD-YGGDPNRIYLMGQSAGAHI 37 (224)
Q Consensus 5 ~~~al~~l~~~~~~-~~~~~~~i~l~G~S~GG~l 37 (224)
++.+++|+.....+ -....+.+.++|.| ||..
T Consensus 109 LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 109 QKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred HHHHHHhcccCcccccccCCCcEEEEEeC-CcHh
Confidence 57889999663210 01233579999998 5444
No 294
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=32.46 E-value=42 Score=26.14 Aligned_cols=24 Identities=25% Similarity=0.178 Sum_probs=19.0
Q ss_pred CCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 20 GGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 20 ~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
++.+ -.+.|.|+|+.+++.++...
T Consensus 95 ~l~~--~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 95 DLLP--RVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred CCCC--CEEEEEcHHHHHHHHHHcCC
Confidence 3544 36999999999999988764
No 295
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.83 E-value=45 Score=25.19 Aligned_cols=37 Identities=19% Similarity=0.084 Sum_probs=23.2
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
-+++.+.++... +-.+--.++|-|+|+..+..++...
T Consensus 21 GVl~~L~e~g~~--l~~~~~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 21 GVASCLLEHAPF--LVANARKIYGASAGALTATALVTGV 57 (249)
T ss_pred HHHHHHHhcCCc--ccccCCeEEEEcHHHHHHHHHHcCC
Confidence 355666554211 1111356889999999999887653
No 296
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=31.66 E-value=41 Score=21.40 Aligned_cols=34 Identities=26% Similarity=0.464 Sum_probs=25.2
Q ss_pred CCEEEEe---eCCCCccCchHHHHHHHHHHHcCCccEEE
Q 027370 123 PPIILFH---GTSDYSIPSDASMAFADALQKVGAKPELV 158 (224)
Q Consensus 123 ~P~lii~---g~~D~~vp~~~~~~~~~~l~~~~~~~~~~ 158 (224)
.|.|++. ..+| +|-++..-+..++.+.|..++.+
T Consensus 62 vPl~L~~G~H~~~D--ipge~~~SW~~~l~~~g~~v~~~ 98 (103)
T cd03413 62 MPLMLVAGDHAHND--MAGDEPDSWKSILEAAGIKVETV 98 (103)
T ss_pred Eehhheecccchhc--CCCCCchhHHHHHHHCCCeeEEE
Confidence 5888884 4567 77777778888888888776644
No 297
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=31.08 E-value=78 Score=26.02 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=23.5
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhh
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLF 169 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 169 (224)
..+++++|+.|+..... ..+. ....+...+++|+.|+.-+
T Consensus 377 tnviFtNG~~DPW~~lg----v~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG----VTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S----SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCccccc----CCCC---CCCCcccEEECCCeeeccc
Confidence 47999999999884443 1111 2345666788999999533
No 298
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.84 E-value=39 Score=26.67 Aligned_cols=17 Identities=24% Similarity=0.366 Sum_probs=14.6
Q ss_pred EEEeeChhHHHHHHHHH
Q 027370 27 YLMGQSAGAHISSCALL 43 (224)
Q Consensus 27 ~l~G~S~GG~la~~~a~ 43 (224)
.+.|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 68999999999987653
No 299
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=30.79 E-value=50 Score=26.03 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=18.3
Q ss_pred CCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 20 GGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 20 ~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
++.+ -++.|.|+|+.++..++..
T Consensus 94 gl~p--~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 94 QLLP--RVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCC--CEEEEECHHHHHHHHHHcC
Confidence 4554 3599999999999988865
No 300
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=30.73 E-value=46 Score=27.05 Aligned_cols=24 Identities=25% Similarity=0.319 Sum_probs=19.0
Q ss_pred CCCCCcEEEEeeChhHHHHHHHHHhh
Q 027370 20 GGDPNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 20 ~~~~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
|+-| -+|.|.|+|+.+++.++...
T Consensus 109 gl~p--~~i~GtS~Gaivaa~~a~~~ 132 (391)
T cd07229 109 GLLP--RIITGTATGALIAALVGVHT 132 (391)
T ss_pred CCCC--ceEEEecHHHHHHHHHHcCC
Confidence 4554 35999999999999998753
No 301
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=30.29 E-value=42 Score=26.35 Aligned_cols=21 Identities=19% Similarity=0.132 Sum_probs=17.2
Q ss_pred CCcEEEEeeChhHHHHHHHHH
Q 027370 23 PNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~ 43 (224)
....++.|||+|=+.|+.++.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 346799999999999887664
No 302
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.18 E-value=51 Score=24.93 Aligned_cols=19 Identities=32% Similarity=0.253 Sum_probs=16.4
Q ss_pred EEEEeeChhHHHHHHHHHh
Q 027370 26 IYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~ 44 (224)
-.++|-|+|+..+..++..
T Consensus 34 ~~i~GtSAGAl~aa~~asg 52 (252)
T cd07221 34 RMFFGASAGALHCVTFLSG 52 (252)
T ss_pred CEEEEEcHHHHHHHHHHhC
Confidence 4699999999999988764
No 303
>PRK10673 acyl-CoA esterase; Provisional
Probab=29.96 E-value=2.2e+02 Score=20.78 Aligned_cols=62 Identities=16% Similarity=0.145 Sum_probs=35.2
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
.+|++++||-.+.. ..-..+.+.+. ...+++.+.--||+... .+..-..+++.+++.++++.
T Consensus 16 ~~~iv~lhG~~~~~---~~~~~~~~~l~---~~~~vi~~D~~G~G~s~--~~~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGSL---DNLGVLARDLV---NDHDIIQVDMRNHGLSP--RDPVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCch---hHHHHHHHHHh---hCCeEEEECCCCCCCCC--CCCCCCHHHHHHHHHHHHHH
Confidence 47999999976643 22233444443 23455555555665221 11112346778888888875
No 304
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=29.94 E-value=26 Score=29.31 Aligned_cols=22 Identities=27% Similarity=0.273 Sum_probs=18.2
Q ss_pred cEEEEeeChhHHHHHHHHHhhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~~ 46 (224)
+-+|.|.|+||.+|..++.+..
T Consensus 203 P~IIsGsS~GaivAsl~~v~~~ 224 (543)
T KOG2214|consen 203 PNIISGSSAGAIVASLVGVRSN 224 (543)
T ss_pred chhhcCCchhHHHHHHHhhcch
Confidence 4678999999999998887653
No 305
>cd01785 PDZ_GEF_RA Ubiquitin-like domain of PDZ_GEF_RA. PDZ_GEF_RA PDZ-GEF is a guanine nucleotide exchange factor (GEF) characterised by the presence of a PSD-95/DlgA/ZO-1 (PDZ) domain, a Ras-association (RA) domain and a region related to a cyclic nucleotide binding domain (RCBD). RA-GEF exchanges nucleotides of both Rap1 and Rap2, but is also thought to mediate cAMP-induced Ras activation. The RA domain interacts with Rap1 and also contributes to the membrane localization of RA-GEF. This domain may function in a positive feedback loop.
Probab=29.67 E-value=37 Score=20.43 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=14.0
Q ss_pred CCCCCchHHHHhhhhcC
Q 027370 206 RKRLVPEPLLRMARLIS 222 (224)
Q Consensus 206 ~~~~~~~~~~~~~~~~~ 222 (224)
..+++|+-|..||.+|+
T Consensus 59 KQrRLPdql~~La~RI~ 75 (85)
T cd01785 59 KQRRLPDQLQNLAERIQ 75 (85)
T ss_pred eeccCCHHHHHHHHhhc
Confidence 45678999999999886
No 306
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=29.11 E-value=48 Score=29.50 Aligned_cols=18 Identities=22% Similarity=0.100 Sum_probs=15.9
Q ss_pred EEEEeeChhHHHHHHHHH
Q 027370 26 IYLMGQSAGAHISSCALL 43 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~ 43 (224)
=+|.|.|+||.++..+|.
T Consensus 68 d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 68 DVISGTSAGGINGVLLAY 85 (739)
T ss_pred ceEEeeCHHHHHHHHHHc
Confidence 568999999999998886
No 307
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=28.86 E-value=38 Score=19.81 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=16.2
Q ss_pred ccCCCCCcEEEEeeC-hhHHHHH
Q 027370 18 DYGGDPNRIYLMGQS-AGAHISS 39 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S-~GG~la~ 39 (224)
.+++++++++++|.| .--..+.
T Consensus 16 ~~~~~~~~~~~VGD~~~~Di~~a 38 (75)
T PF13242_consen 16 RLGVDPSRCVMVGDSLETDIEAA 38 (75)
T ss_dssp HHTSGGGGEEEEESSTTTHHHHH
T ss_pred HcCCCHHHEEEEcCCcHhHHHHH
Confidence 446788999999999 5554443
No 308
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=28.11 E-value=1.3e+02 Score=21.09 Aligned_cols=68 Identities=9% Similarity=0.155 Sum_probs=43.6
Q ss_pred CEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcC-----CCCCchh-hhcCCCCCCccHHHHHHHHHHHhhCh
Q 027370 124 PIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYP-----GKSHTDL-FLQDPLRGGKDDLFDHIIAVIHANDK 194 (224)
Q Consensus 124 P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~-----~~~H~~~-~~~~~~~~~~~~~~~~i~~fl~~~~~ 194 (224)
.+||++++.|..+ ..-++.++..|++.|..+++.-.. +..|.+- ..+.+. ....+.+.+.+|+.++..
T Consensus 2 k~LIlYstr~GqT-~kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI--~~~h~~~~~~~Fv~k~~e 75 (175)
T COG4635 2 KTLILYSTRDGQT-RKIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASI--RYGHFHEAVQSFVKKHAE 75 (175)
T ss_pred ceEEEEecCCCcH-HHHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecch--hhhhhHHHHHHHHHHHHH
Confidence 4899999999652 245666777788888777766542 3334431 122111 245788889999998743
No 309
>COG3675 Predicted lipase [Lipid metabolism]
Probab=28.05 E-value=28 Score=26.87 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=22.1
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHH
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 43 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~ 43 (224)
-++|+.+.+.. . -++++.|||-||+++...+.
T Consensus 163 q~~~lleeiP~---~-Yrig~tghS~g~aii~vrGt 194 (332)
T COG3675 163 QEQTLLEEIPQ---G-YRIGITGHSSGGAIICVRGT 194 (332)
T ss_pred HHHHHHHhccc---c-eEEEEEeecCCccEEEEecc
Confidence 45666665532 0 26899999999998865544
No 310
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=27.54 E-value=29 Score=23.81 Aligned_cols=12 Identities=50% Similarity=0.628 Sum_probs=10.8
Q ss_pred EEEEeeChhHHH
Q 027370 26 IYLMGQSAGAHI 37 (224)
Q Consensus 26 i~l~G~S~GG~l 37 (224)
..++|.|+|+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 789999999976
No 311
>PRK01253 preprotein translocase subunit SecG; Reviewed
Probab=27.51 E-value=50 Score=18.31 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=24.4
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHH
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSC 40 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~ 40 (224)
..++|..+......++|..+.++|...|+.+.+.
T Consensus 15 GL~ryy~ed~~~iKi~P~~Vi~~~~~~~~~v~~L 48 (54)
T PRK01253 15 GLIRYFEEETEAIKIDPKTVIAIGLALGIFVLVL 48 (54)
T ss_pred hhhhhhhcccCccccCCeeeeeeHHHHHHHHHHH
Confidence 4566666655566688888888888888877654
No 312
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=26.34 E-value=1.8e+02 Score=20.42 Aligned_cols=37 Identities=11% Similarity=0.068 Sum_probs=23.2
Q ss_pred HHHHHHHHhcccccCCCCCcEEEEeeC-hhHHHHHHHHHh
Q 027370 6 SQGISFVFNNIADYGGDPNRIYLMGQS-AGAHISSCALLE 44 (224)
Q Consensus 6 ~~al~~l~~~~~~~~~~~~~i~l~G~S-~GG~la~~~a~~ 44 (224)
..+++.+.+... .+...++.|+|-+ ++|..+..++..
T Consensus 29 ~a~v~l~~~~~~--~l~gk~vlViG~G~~~G~~~a~~L~~ 66 (168)
T cd01080 29 AGILELLKRYGI--DLAGKKVVVVGRSNIVGKPLAALLLN 66 (168)
T ss_pred HHHHHHHHHcCC--CCCCCEEEEECCcHHHHHHHHHHHhh
Confidence 456666666543 2555699999999 566645444443
No 313
>COG4939 Major membrane immunogen, membrane-anchored lipoprotein [Function unknown]
Probab=26.23 E-value=2.1e+02 Score=19.17 Aligned_cols=46 Identities=15% Similarity=0.246 Sum_probs=34.2
Q ss_pred cCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHhh
Q 027370 136 IPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHAN 192 (224)
Q Consensus 136 vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~~ 192 (224)
.|.+.-..+++.|-+.+.+-++.++.|+.|. .+++.+.+.+-|++.
T Consensus 91 gp~~~f~~laD~Lve~q~p~~VdvVsGATvS-----------s~~F~~~~~~llq~A 136 (147)
T COG4939 91 GPVQGFSTLADKLVEVQDPNEVDVVSGATVS-----------SKEFKEAVWNLLQKA 136 (147)
T ss_pred CHHHHHHHHHHHHHhcCCccceeeeeccccc-----------hHHHHHHHHHHHHHH
Confidence 4456667788888777777789999999998 567777777766653
No 314
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.12 E-value=1e+02 Score=20.19 Aligned_cols=30 Identities=13% Similarity=0.333 Sum_probs=20.8
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHH
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHIS 38 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la 38 (224)
+...++.|..... ..+.|+++|||--|.+.
T Consensus 44 ~~~~sl~~av~~l-----~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVL-----GVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhh-----CCCEEEEEccCCCcHHH
Confidence 4667777776643 24589999997666554
No 315
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=26.04 E-value=1.8e+02 Score=20.39 Aligned_cols=33 Identities=9% Similarity=0.288 Sum_probs=21.9
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHh
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~ 44 (224)
++..+++.|.+ .++|+++|....+.++..+..+
T Consensus 19 ~~~~~~~~l~~--------a~~I~i~G~G~S~~~A~~~~~~ 51 (179)
T TIGR03127 19 ELDKLADKIIK--------AKRIFVAGAGRSGLVGKAFAMR 51 (179)
T ss_pred HHHHHHHHHHh--------CCEEEEEecCHHHHHHHHHHHH
Confidence 34455555533 3589999998877777666554
No 316
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=24.19 E-value=1.5e+02 Score=23.40 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=27.6
Q ss_pred EEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCc
Q 027370 125 IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 125 ~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 166 (224)
+.+++| .| ++.+.++.+.+.+++.-+++++.++.|....
T Consensus 267 vTi~~G-~~--~~~~~a~~l~~~l~~~~p~~eve~~~GgQ~~ 305 (313)
T PF13684_consen 267 VTIYYG-ED--VSEEEAEALAEFLEEKYPDVEVEVYDGGQPL 305 (313)
T ss_pred EEEEec-CC--CCHHHHHHHHHHHHHHhCCeEEEEEECCCcc
Confidence 455555 66 5567888888888765567888888876655
No 317
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=24.13 E-value=74 Score=25.81 Aligned_cols=19 Identities=26% Similarity=0.322 Sum_probs=16.0
Q ss_pred EEEEeeChhHHHHHHHHHh
Q 027370 26 IYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 26 i~l~G~S~GG~la~~~a~~ 44 (224)
-.++|-|+|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 4599999999999988754
No 318
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.81 E-value=1.2e+02 Score=21.65 Aligned_cols=32 Identities=6% Similarity=0.165 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHH
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCA 41 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~ 41 (224)
...+++|..... + .+.|+|+|||-=|.+...+
T Consensus 67 ~~asleyAv~~L---~--v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVL---K--VKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhc---C--CCEEEEecCCCchHHHHHH
Confidence 556777766643 2 4589999999877766543
No 319
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=23.52 E-value=94 Score=22.68 Aligned_cols=27 Identities=22% Similarity=0.420 Sum_probs=17.6
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHH
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAH 36 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~ 36 (224)
.+++++.+ .+++++++++.+|.|.==.
T Consensus 189 ~ai~~l~~---~~~i~~~~~~~~GD~~ND~ 215 (254)
T PF08282_consen 189 SAIKYLLE---YLGISPEDIIAFGDSENDI 215 (254)
T ss_dssp HHHHHHHH---HHTTSGGGEEEEESSGGGH
T ss_pred HHHHHHhh---hcccccceeEEeecccccH
Confidence 45666654 4467777888888887443
No 320
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=23.29 E-value=3.2e+02 Score=22.32 Aligned_cols=65 Identities=17% Similarity=0.104 Sum_probs=32.8
Q ss_pred CCCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 122 LPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 122 ~~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
.++++++||-.+.. ..-..+++.+.+.|..+ +.+.--||+...-........+...+++..+++.
T Consensus 136 ~~~Vl~lHG~~~~~---~~~~~~a~~L~~~Gy~V--~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~ 200 (395)
T PLN02652 136 RGILIIIHGLNEHS---GRYLHFAKQLTSCGFGV--YAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEK 200 (395)
T ss_pred ceEEEEECCchHHH---HHHHHHHHHHHHCCCEE--EEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 35789999987642 23345667776555544 4444445552111000111234555566555554
No 321
>PRK10834 vancomycin high temperature exclusion protein; Provisional
Probab=23.25 E-value=1.4e+02 Score=22.47 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=30.0
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCc
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 166 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 166 (224)
.+.+++.|++.. -..+++..+.+.+.+.|.+.+-.+.+..+..
T Consensus 82 ~~~ilvSGg~~~-~~~~Ea~~M~~yLi~~GVp~e~Ii~e~~s~n 124 (239)
T PRK10834 82 VNYLLLSGDNAL-QSYNEPMTMRKDLIAAGVDPSDIVLDYAGFR 124 (239)
T ss_pred CCEEEEeCCCCC-CCCCHHHHHHHHHHHcCCCHHHEEecCCCCC
Confidence 467888887643 2457788888888888877666666665554
No 322
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=23.18 E-value=71 Score=22.93 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=19.8
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHHH
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCAL 42 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~a 42 (224)
.++++++++.++|.|..+..++..+
T Consensus 153 ~~~~~~~~~~~igDs~~d~~aa~~a 177 (213)
T TIGR01449 153 RLGVAPQQMVYVGDSRVDIQAARAA 177 (213)
T ss_pred HcCCChhHeEEeCCCHHHHHHHHHC
Confidence 4567888999999999887776544
No 323
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=22.84 E-value=86 Score=21.18 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=26.7
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHc-CCccEEEEcCC
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKV-GAKPELVLYPG 162 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~-~~~~~~~~~~~ 162 (224)
+++||+++.+. ---.+....|++.|+.. |.++.+..+..
T Consensus 1 ~kVfI~Ys~d~-~~h~~~V~~la~~L~~~~g~~V~lD~~~~ 40 (150)
T PF08357_consen 1 RKVFISYSHDS-EEHKEWVLALAEFLRQNCGIDVILDQWEL 40 (150)
T ss_pred CeEEEEeCCCC-HHHHHHHHHHHHHHHhccCCceeecHHhh
Confidence 36788887744 22235578888888887 88877777653
No 324
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=22.83 E-value=1.7e+02 Score=23.97 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=24.7
Q ss_pred HHHHHHhcccccCCCCCcEEEEeeChhHHHHHHHHHhhh
Q 027370 8 GISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 8 al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~ 46 (224)
+.+++.+..++-.++ -|+-+|.|.|..++..++...+
T Consensus 81 a~~~v~~l~~~g~i~--Gvi~~GGs~GT~lat~aMr~LP 117 (403)
T PF06792_consen 81 AARFVSDLYDEGKID--GVIGIGGSGGTALATAAMRALP 117 (403)
T ss_pred HHHHHHHHHhcCCcc--EEEEecCCccHHHHHHHHHhCC
Confidence 334444444332344 5889999999999998887544
No 325
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.78 E-value=1.9e+02 Score=22.74 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=24.2
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeC--hhHHHHHHHHHh
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQS--AGAHISSCALLE 44 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S--~GG~la~~~a~~ 44 (224)
..++.+.... ..+.-++++++|.| ||--++.++...
T Consensus 145 aii~lL~~~~--i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 145 GCLRLLEDTC--GDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHhC--CCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4445454331 23455689999997 999999888654
No 326
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=22.73 E-value=3.2e+02 Score=20.07 Aligned_cols=67 Identities=16% Similarity=0.101 Sum_probs=30.8
Q ss_pred CCEEEEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchhhhcCCCCCCccHHHHHHHHHHHh
Q 027370 123 PPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGKDDLFDHIIAVIHA 191 (224)
Q Consensus 123 ~P~lii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~i~~fl~~ 191 (224)
+|++++||.-... ...-..+.+.+...+..+-....+|.|+.............+.+.+++..+++.
T Consensus 26 ~~vl~~hG~~g~~--~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 26 IKLLLLHGGPGMS--HEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK 92 (288)
T ss_pred CeEEEEcCCCCcc--HHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH
Confidence 6899999964322 222233444444334444444444444331100000001245667777777664
No 327
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=21.48 E-value=2.2e+02 Score=21.94 Aligned_cols=23 Identities=22% Similarity=0.387 Sum_probs=18.3
Q ss_pred CCcEEEEeeChhHHHHHHHHHhh
Q 027370 23 PNRIYLMGQSAGAHISSCALLEQ 45 (224)
Q Consensus 23 ~~~i~l~G~S~GG~la~~~a~~~ 45 (224)
.++|+++|....|.+|..+..+.
T Consensus 130 A~rI~~~G~g~S~~vA~~~~~~l 152 (281)
T COG1737 130 ARRIYFFGLGSSGLVASDLAYKL 152 (281)
T ss_pred CCeEEEEEechhHHHHHHHHHHH
Confidence 46899999888888888776653
No 328
>PF12531 DUF3731: DNA-K related protein ; InterPro: IPR021030 Proteins in this family are bacterial proteins of approximately 250 amino acids in length. There are two conserved sequence motifs: RPG and WRR. The proteins in this family are frequently annotated as DNA-K related proteins however there is little accompanying literature to confirm this.
Probab=21.41 E-value=86 Score=23.71 Aligned_cols=63 Identities=21% Similarity=0.293 Sum_probs=41.0
Q ss_pred EEeeCCCCccCchHHHHHHHHHHHcCCccEEEEcCCCCCchh----hhcCCCCCCccHHHHHHHHHHHhhC
Q 027370 127 LFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDL----FLQDPLRGGKDDLFDHIIAVIHAND 193 (224)
Q Consensus 127 ii~g~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~----~~~~~~~~~~~~~~~~i~~fl~~~~ 193 (224)
.++|..|.+||++.+..+.+.+-+... ...+.++-... ..++...+-.+++.+.|+++|.+.-
T Consensus 148 p~yGs~h~Vvp~~~~~~wl~~ll~~dw----k~~~~a~fA~~q~aR~TgDR~rDl~~~~R~~v~~~L~~~~ 214 (249)
T PF12531_consen 148 PFYGSAHNVVPPEVAEQWLDALLALDW----KKPPPAAFAAVQMARMTGDRARDLPDALRQKVIEKLKASK 214 (249)
T ss_pred cccCCcccccCHHHHHHHHHHHHhcCC----CCCchHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHhCC
Confidence 467999999999999999998854331 11121211111 1334444557889999999998853
No 329
>PHA01735 hypothetical protein
Probab=21.23 E-value=83 Score=18.35 Aligned_cols=13 Identities=15% Similarity=0.319 Sum_probs=11.2
Q ss_pred chHHHHHHHHHhc
Q 027370 3 KDVSQGISFVFNN 15 (224)
Q Consensus 3 ~D~~~al~~l~~~ 15 (224)
.|..+|.+|+.++
T Consensus 33 aDL~AA~d~Lk~N 45 (76)
T PHA01735 33 ADLRAACDWLKSN 45 (76)
T ss_pred HHHHHHHHHHHHC
Confidence 4889999999886
No 330
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=21.21 E-value=93 Score=22.27 Aligned_cols=24 Identities=17% Similarity=0.153 Sum_probs=18.4
Q ss_pred ccCCCCCcEEEEeeChhHHHHHHH
Q 027370 18 DYGGDPNRIYLMGQSAGAHISSCA 41 (224)
Q Consensus 18 ~~~~~~~~i~l~G~S~GG~la~~~ 41 (224)
.+++++++++++|.|..+..++.-
T Consensus 143 ~~~~~~~~~l~igD~~~Di~aA~~ 166 (205)
T TIGR01454 143 LLDVPPEDAVMVGDAVTDLASARA 166 (205)
T ss_pred HcCCChhheEEEcCCHHHHHHHHH
Confidence 457888899999999876666543
No 331
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.91 E-value=66 Score=22.65 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=17.6
Q ss_pred CcEEEEeeChhHHHHHHHHHh
Q 027370 24 NRIYLMGQSAGAHISSCALLE 44 (224)
Q Consensus 24 ~~i~l~G~S~GG~la~~~a~~ 44 (224)
+.|.++.+|||-++|-.++..
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg 77 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQG 77 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhh
Confidence 368999999999999887654
No 332
>PRK15219 carbonic anhydrase; Provisional
Probab=20.89 E-value=1.5e+02 Score=22.47 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=23.1
Q ss_pred hHHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHH
Q 027370 4 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCA 41 (224)
Q Consensus 4 D~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~ 41 (224)
|+..+++|..... +.+.|+|+|||-=|.+...+
T Consensus 128 ~~~~slEyAv~~L-----~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 128 DLLGSMEFACAVA-----GAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred chhhHHHHHHHHc-----CCCEEEEecCCcchHHHHHH
Confidence 4567788877753 24589999999877666543
No 333
>PLN02382 probable sucrose-phosphatase
Probab=20.80 E-value=98 Score=25.43 Aligned_cols=29 Identities=17% Similarity=0.452 Sum_probs=22.3
Q ss_pred HHHHHHHHhcccccCCCCCcEEEEeeChh
Q 027370 6 SQGISFVFNNIADYGGDPNRIYLMGQSAG 34 (224)
Q Consensus 6 ~~al~~l~~~~~~~~~~~~~i~l~G~S~G 34 (224)
..|++++.+.....++++++++.+|.|.=
T Consensus 177 g~Al~~L~~~~~~~gi~~~~~iafGDs~N 205 (413)
T PLN02382 177 GQALAYLLKKLKAEGKAPVNTLVCGDSGN 205 (413)
T ss_pred HHHHHHHHHHhhhcCCChhcEEEEeCCHH
Confidence 35788888865444788889999999953
No 334
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
Probab=20.77 E-value=2.3e+02 Score=25.34 Aligned_cols=42 Identities=24% Similarity=0.405 Sum_probs=32.3
Q ss_pred chHHHHHHHHHhcccccCCCCC-----cEEEE---------eeChhHHHHHHHHHh
Q 027370 3 KDVSQGISFVFNNIADYGGDPN-----RIYLM---------GQSAGAHISSCALLE 44 (224)
Q Consensus 3 ~D~~~al~~l~~~~~~~~~~~~-----~i~l~---------G~S~GG~la~~~a~~ 44 (224)
+.+..|+.|++++..+++++++ .|.+- |=|+|..++..+...
T Consensus 638 ESa~~A~s~vrs~a~~~~i~~~~fek~dIHiHVPeGAtPKDGPSAGitm~TAlvS~ 693 (782)
T COG0466 638 ESAQAALSYVRSRAEKLGIDPDFFEKRDIHIHVPEGATPKDGPSAGITMATALVSL 693 (782)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccccceEEECCCCCCCCCCcchHHHHHHHHHHH
Confidence 5678899999999998887652 34443 889999998876654
No 335
>PLN03006 carbonate dehydratase
Probab=20.26 E-value=1.3e+02 Score=23.50 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHH
Q 027370 5 VSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCA 41 (224)
Q Consensus 5 ~~~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~ 41 (224)
...+|+|....+ + .+.|+|+|||-=|.+...+
T Consensus 158 ~~aSLEYAV~~L---~--V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTL---N--VENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHh---C--CCEEEEecCCCchHHHHHh
Confidence 456777776653 2 3589999999877666543
No 336
>PRK10976 putative hydrolase; Provisional
Probab=20.14 E-value=73 Score=23.96 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=22.1
Q ss_pred HHHHHHHhcccccCCCCCcEEEEeeChhHHHHHHH
Q 027370 7 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCA 41 (224)
Q Consensus 7 ~al~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~ 41 (224)
.+++++.+ .+|+++++++.+|.|.==.-.+..
T Consensus 193 ~al~~l~~---~lgi~~~~viafGD~~NDi~Ml~~ 224 (266)
T PRK10976 193 HALEAVAK---KLGYSLKDCIAFGDGMNDAEMLSM 224 (266)
T ss_pred HHHHHHHH---HcCCCHHHeEEEcCCcccHHHHHH
Confidence 46667766 457888899999999754444433
No 337
>PRK02399 hypothetical protein; Provisional
Probab=20.12 E-value=2.2e+02 Score=23.39 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=18.8
Q ss_pred cEEEEeeChhHHHHHHHHHhhh
Q 027370 25 RIYLMGQSAGAHISSCALLEQA 46 (224)
Q Consensus 25 ~i~l~G~S~GG~la~~~a~~~~ 46 (224)
-|+-+|.|.|..++..++...+
T Consensus 98 gviglGGs~GT~lat~aMr~LP 119 (406)
T PRK02399 98 GVIGLGGSGGTALATPAMRALP 119 (406)
T ss_pred EEEEecCcchHHHHHHHHHhCC
Confidence 6899999999999998887654
Done!