Query 027371
Match_columns 224
No_of_seqs 86 out of 88
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 14:45:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027371.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027371hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zqs_A E3 ubiquitin-protein li 100.0 2.6E-75 8.8E-80 496.3 17.3 178 14-191 1-185 (186)
2 3k1l_B Fancl; UBC, ring, RWD, 100.0 6.9E-52 2.4E-56 380.4 14.6 199 17-222 109-326 (381)
3 2a7l_A Hypothetical ubiquitin- 96.5 0.014 4.7E-07 46.5 9.1 83 17-99 25-135 (136)
4 2h2y_A Ubiquitin-conjugating e 96.5 0.048 1.6E-06 43.1 11.8 86 14-99 20-130 (136)
5 2fo3_A Ubiquitin-conjugating e 96.4 0.039 1.3E-06 42.9 10.9 85 16-100 8-117 (125)
6 2ayv_A Ubiquitin-conjugating e 96.4 0.042 1.4E-06 44.9 11.3 93 7-99 14-130 (166)
7 2aak_A UBC1, ubiquitin conjuga 96.2 0.041 1.4E-06 44.0 10.2 84 16-99 6-113 (152)
8 1zdn_A Ubiquitin-conjugating e 96.2 0.053 1.8E-06 43.7 10.9 90 10-99 9-122 (158)
9 4gpr_A Ubiquitin-conjugating e 96.1 0.058 2E-06 43.1 10.7 85 16-100 6-114 (151)
10 3rcz_B SUMO-conjugating enzyme 96.1 0.046 1.6E-06 44.6 10.0 87 13-99 9-126 (163)
11 2r0j_A Ubiquitin carrier prote 96.1 0.054 1.9E-06 43.2 10.2 83 17-99 4-110 (149)
12 2c4o_A Ubiquitin-conjugating e 96.1 0.072 2.5E-06 43.4 11.1 87 13-99 18-128 (165)
13 2e2c_A Ubiquitin conjugating e 96.0 0.07 2.4E-06 42.9 10.8 88 12-99 7-118 (156)
14 2awf_A Ubiquitin-conjugating e 96.0 0.089 3.1E-06 43.1 11.5 92 8-99 11-140 (172)
15 1z2u_A Ubiquitin-conjugating e 96.0 0.06 2.1E-06 42.9 10.2 84 16-99 6-113 (150)
16 1jat_A Ubiquitin-conjugating e 95.9 0.06 2E-06 43.2 9.7 83 17-99 8-114 (155)
17 2bep_A Ubiquitin-conjugating e 95.8 0.093 3.2E-06 42.3 10.8 84 16-99 10-121 (159)
18 3h8k_A Ubiquitin-conjugating e 95.8 0.094 3.2E-06 42.3 10.8 84 16-99 5-126 (164)
19 2c2v_B Ubiquitin-conjugating e 95.8 0.064 2.2E-06 43.1 9.7 84 16-99 7-114 (154)
20 1zuo_A Hypothetical protein LO 95.8 0.088 3E-06 43.9 10.8 89 12-100 25-154 (186)
21 1ayz_A UBC2, ubiquitin-conjuga 95.7 0.081 2.8E-06 43.3 10.2 84 16-99 6-113 (169)
22 1fxt_A Ubiquitin-conjugating e 95.7 0.097 3.3E-06 41.7 10.1 83 17-99 4-112 (149)
23 1wzv_A Ubiquitin-conjugating e 95.6 0.1 3.4E-06 41.8 10.1 83 16-99 6-114 (155)
24 3bzh_A Ubiquitin-conjugating e 95.6 0.11 3.9E-06 43.5 10.8 87 13-99 47-157 (194)
25 3k9o_A Ubiquitin-conjugating e 95.5 0.15 5.2E-06 42.6 11.3 84 16-99 7-118 (201)
26 2ucz_A UBC7, ubiquitin conjuga 95.5 0.15 5.1E-06 41.2 10.8 84 16-99 6-127 (165)
27 2f4w_A Ubiquitin-conjugating e 95.4 0.15 5.1E-06 42.4 10.7 90 10-99 10-124 (187)
28 2pwq_A Ubiquitin conjugating e 95.4 0.13 4.5E-06 43.9 10.6 91 9-99 18-133 (216)
29 1i7k_A Ubiquitin-conjugating e 95.4 0.13 4.5E-06 42.5 10.3 88 12-99 28-139 (179)
30 1yh2_A HSPC150 protein similar 95.4 0.21 7.2E-06 40.7 11.3 86 14-99 4-117 (169)
31 4ds2_A Ubiquitin-conjugating e 95.3 0.11 3.9E-06 42.1 9.7 83 16-99 10-131 (167)
32 1yrv_A Ubiquitin-conjugating l 95.3 0.15 5.2E-06 41.7 10.3 86 14-99 23-135 (169)
33 2q0v_A Ubiquitin-conjugating e 95.2 0.17 5.8E-06 41.0 10.3 84 16-99 23-136 (156)
34 2gjd_A Ubiquitin-conjugating e 95.2 0.16 5.6E-06 40.8 10.1 84 16-99 6-120 (157)
35 1c4z_D UBCH7, ubiquitin conjug 95.1 0.1 3.5E-06 41.8 8.6 83 17-99 5-112 (154)
36 1y8x_A Ubiquitin-conjugating e 95.1 0.2 6.9E-06 40.5 10.4 87 13-99 5-113 (160)
37 1jat_B Ubiquitin-conjugating e 95.0 0.34 1.2E-05 38.1 11.3 83 17-99 9-121 (138)
38 2grr_A Ubiquitin-conjugating e 95.0 0.098 3.4E-06 42.3 8.3 85 15-99 8-123 (161)
39 3o2u_A NEDD8-conjugating enzym 95.0 0.22 7.6E-06 41.5 10.7 92 8-99 23-142 (190)
40 3rz3_A Ubiquitin-conjugating e 94.9 0.3 1E-05 40.3 11.2 86 14-99 7-130 (183)
41 3e46_A Ubiquitin-conjugating e 94.9 0.24 8.1E-06 43.3 10.9 86 14-99 57-170 (253)
42 3fn1_B NEDD8-conjugating enzym 94.8 0.21 7.3E-06 40.4 9.7 92 8-99 8-129 (167)
43 2f4z_A Tgtwinscan_2721 - E2 do 94.7 0.32 1.1E-05 40.7 11.0 86 14-99 32-155 (193)
44 2a4d_A Ubiquitin-conjugating e 94.6 0.42 1.4E-05 38.9 11.1 84 16-99 27-141 (160)
45 2nvu_C NEDD8-conjugating enzym 94.5 0.39 1.3E-05 39.6 10.8 90 9-99 21-133 (180)
46 3ceg_A Baculoviral IAP repeat- 94.3 0.35 1.2E-05 43.8 11.0 90 10-99 72-202 (323)
47 2onu_A Ubiquitin-conjugating e 94.3 0.22 7.6E-06 39.9 8.7 79 17-96 5-106 (152)
48 2y9m_A Ubiquitin-conjugating e 93.9 0.68 2.3E-05 37.7 11.1 84 16-99 8-130 (172)
49 2z5d_A Ubiquitin-conjugating e 93.9 0.28 9.7E-06 40.6 8.7 86 14-99 25-131 (179)
50 1yf9_A Ubiquitin carrier prote 93.1 0.57 1.9E-05 38.3 9.3 80 16-95 14-114 (171)
51 1tte_A Ubiquitin-conjugating e 93.1 0.21 7.3E-06 42.5 7.0 83 17-99 5-113 (215)
52 2hlw_A Ubiquitin-conjugating e 93.1 0.74 2.5E-05 37.7 10.0 85 15-99 36-151 (170)
53 4ddg_A Ubiquitin-conjugating e 92.8 0.69 2.3E-05 42.5 10.4 84 16-99 5-112 (399)
54 3obq_A Tumor susceptibility ge 87.6 1.9 6.5E-05 34.7 7.5 52 49-100 65-137 (146)
55 1ukx_A GCN2, GCN2 EIF2alpha ki 87.2 7.6 0.00026 29.5 10.5 63 10-72 6-84 (137)
56 2ebk_A RWD domain-containing p 87.1 4.2 0.00014 30.8 8.9 60 14-73 7-78 (128)
57 2ebm_A RWD domain-containing p 86.7 3.2 0.00011 31.4 8.0 59 14-72 10-76 (128)
58 2yz0_A Serine/threonine-protei 80.8 9.2 0.00032 29.2 8.5 60 14-73 10-84 (138)
59 2daw_A RWD domain containing p 73.8 5.8 0.0002 31.4 5.6 24 52-75 76-99 (154)
60 2day_A Ring finger protein 25; 73.7 14 0.00046 27.8 7.5 56 18-73 12-81 (128)
61 3r3q_A Suppressor protein STP2 73.1 4 0.00014 33.3 4.6 47 53-99 83-154 (162)
62 2z6o_A UFM1-conjugating enzyme 70.6 4.3 0.00015 33.7 4.2 21 52-72 84-104 (172)
63 2dax_A Protein C21ORF6; RWD do 63.0 13 0.00044 29.0 5.5 24 52-75 74-97 (152)
64 3ipj_A PTS system, iiabc compo 40.6 22 0.00074 26.3 3.2 34 16-49 6-40 (95)
65 4f98_A Hypothetical protein; P 28.4 82 0.0028 22.2 4.4 32 30-61 27-63 (69)
66 3kpa_A Probable ubiquitin fold 27.4 38 0.0013 27.8 2.8 21 52-72 86-106 (168)
67 3bp3_A Glucose-specific phosph 24.8 36 0.0012 24.3 2.0 27 23-49 11-38 (82)
No 1
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-75 Score=496.28 Aligned_cols=178 Identities=31% Similarity=0.620 Sum_probs=175.7
Q ss_pred hhHHHHHHHHHHhccceeeeecCCcceEEEEEEeCCCCEEEEEEEecCCCCCCCCceeecCCCceecccCccCcHHHHHH
Q 027371 14 SFSRSVYSEIEEVGWEHLVRLSEDLKFLSFRVIDKKGRVHCMEIQLDKNYPRSPPSISADVPYIFNLKWSRKSRLKDLLQ 93 (224)
Q Consensus 14 ~fys~li~Eie~iGW~kl~~id~~ls~i~l~~~D~~gR~H~l~v~l~~~yP~~~P~~~~dlP~~f~~~W~~~ssL~~v~~ 93 (224)
+||++|++||++|||+||+++|++|++|+|+++|++||+|.|+|+|+++||+++|+|++|||++|.++|++++||+++++
T Consensus 1 ~~y~~li~Ei~~iGW~~l~~id~~~~~i~l~~~D~~gR~H~l~v~l~~~yp~~~P~~~~DlP~~~~~~w~~~ssL~~v~~ 80 (186)
T 3zqs_A 1 QFYSSLIEEIGTLGWDKLVYADTCFSTIKLKAEDASGREHLITLKLKAKYPAESPDYFVDFPVPFCASWTPQSSLISIYS 80 (186)
T ss_dssp CCSCSHHHHHHHHCGGGEEEECTTSSEEEEEEECTTSCEEEEEEECCTTTTTSCCEEECCCSSCCCCCCCTTCCHHHHHH
T ss_pred ChHHHHHHHHHHhCCceeeeecCCccEEEEEEEeCCCCeEEEEEEECCCCCCCCCeeEEcCCCCcccccCCCccHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhhhccceeecCCCCCCCceeEEEEeCCceEEEEEEcCCCCCCCCceeeeCCchhhHHHHHHHh
Q 027371 94 QFREHLEKLQEIWNILDEIDKSLWVIDLKNPSRANVCRQINLGYNCIIMLSIHIDDPSSLPECRFMGSDPMVNSLRKTWQ 173 (224)
Q Consensus 94 qF~~~Le~lq~FWd~LdeID~~~wVLEP~~Ptrs~t~RRIaLg~~vsl~ieVdP~~P~~lPe~~FlG~~~~V~~Lr~~l~ 173 (224)
||+++||+||+|||+||+||++||||||++|+||+++|||||||||||+|+|||+||+|+|+|+|+||+++|++||++|+
T Consensus 81 qF~~~Le~lq~Fwd~ldeID~~~wVleP~~Ptr~~~~RRIalg~~vsl~i~vdP~~P~~lPe~~FlG~~~~v~~lr~~~~ 160 (186)
T 3zqs_A 81 QFLAAIESLKAFWDVMDEIDEKTWVLEPEKPPRSATARRIALGNNVSINIEVDPRHPTMLPECFFLGADHVVKPLGIKLS 160 (186)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHSCEEESSSCCTTCCEEEEEEETTEEEEEECCTTSTTSCCEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhcceeccCCCCCccCcEEEEEECCCcEEEEEECCCCCCcCCceEEECChHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCcee-------eecc
Q 027371 174 RNSKRCASSSSFCL-------LRVP 191 (224)
Q Consensus 174 ~n~~~Wd~~~sl~e-------~~fP 191 (224)
+|+++||+++++++ ++||
T Consensus 161 ~nl~~Wd~~~~i~~NL~~il~i~~P 185 (186)
T 3zqs_A 161 RNIHLWDPENSVLQNLKDVLEIDFP 185 (186)
T ss_dssp HHGGGCCTTSCHHHHHHHHHTCCCC
T ss_pred hhHhhcCCCCCHHHHHHHHHCCcCC
Confidence 99999999999998 6766
No 2
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=100.00 E-value=6.9e-52 Score=380.43 Aligned_cols=199 Identities=18% Similarity=0.224 Sum_probs=176.1
Q ss_pred HHHHHHHHHhc--cceeeeecCCcceEEEEEEeCCCCEEEEEEEecCCCCCCCCceeecCCCceec---ccCccCcHHHH
Q 027371 17 RSVYSEIEEVG--WEHLVRLSEDLKFLSFRVIDKKGRVHCMEIQLDKNYPRSPPSISADVPYIFNL---KWSRKSRLKDL 91 (224)
Q Consensus 17 s~li~Eie~iG--W~kl~~id~~ls~i~l~~~D~~gR~H~l~v~l~~~yP~~~P~~~~dlP~~f~~---~W~~~ssL~~v 91 (224)
+.|+.||.+|. -+..+++|.++++|+|..++. .|+|+|+++++ + .-+++++||..+.+ --.+++||+++
T Consensus 109 ~~i~~~~~~l~~~~~~~l~~~~~~s~i~~~~f~~-~~~h~Lel~~~---~--~~v~~h~LP~~~~~~e~l~k~~ssL~~v 182 (381)
T 3k1l_B 109 GNIYYDILALYKSNEYCLQVDEACSMIRFSEFTD-FEQHYLELKIP---S--LLLLDHSLPDCVSLGEMLTKSAGNLEEA 182 (381)
T ss_dssp CCHHHHHHHHHSCSSCEEEECGGGCEEEEEEETT-EEEEEEEEETT---T--CCEEEESSCTTSCHHHHHHHHCCSHHHH
T ss_pred hhHHHHHHHhcCccceEEEecCCccEEEeccccC-ccceEEEEecC---c--eEEecccCCcchhHHHHhcCccccHHHH
Confidence 34668999998 458899999999999999955 99999999998 3 47999999966522 12458999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccceeecCCCCCCCceeEEEEeCCceEEEEEE-cCCCCCCCCceeeeCCchhhHHHHH
Q 027371 92 LQQFREHLEKLQEIWNILDEIDKSLWVIDLKNPSRANVCRQINLGYNCIIMLSI-HIDDPSSLPECRFMGSDPMVNSLRK 170 (224)
Q Consensus 92 ~~qF~~~Le~lq~FWd~LdeID~~~wVLEP~~Ptrs~t~RRIaLg~~vsl~ieV-dP~~P~~lPe~~FlG~~~~V~~Lr~ 170 (224)
++||+++||+||+|||+||+||++||||||++|+|++++||||||+||||+|+| ||++|+|+|+|+|+||+++|++||+
T Consensus 183 ~~qF~~~LE~Lq~FWd~LdeID~~~wVLEP~kPtrs~t~RRIaLgn~vSl~IeV~DP~~Pr~lPe~~FlGpd~~V~~Lr~ 262 (381)
T 3k1l_B 183 LNLFRKLLEDLRPFYDNFMDIDELCHVLQPSPISSKHKTRLFPLKDRVYLKLTIADPFACIASMSLKIIGPTEEVARLRH 262 (381)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHSCCCBSSSCCTTCCEEEEEEETTEEEEEEESCTTSTTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccCCCCCCCCceEEEEeCCCeEEEEEeCCCCCCCcCceeEEECChhHhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHhhcccCCCCCCCcee-------e-eccchhhhhhh----hccccCceeEEEeeccCC-CCCCC
Q 027371 171 TWQRNSKRCASSSSFCL-------L-RVPIGLRLRCR----LSVTEGECRCYCFNKKKT-STLPP 222 (224)
Q Consensus 171 ~l~~n~~~Wd~~~sl~e-------~-~fP~~~~~~~~----~~~~~gec~~~c~~~~~~-~~~~~ 222 (224)
+|++|+++||++++|++ + +||++..+... .+....||+ |||+...+ .++|.
T Consensus 263 ~l~~Nl~~Wd~d~si~eNL~~IL~i~~fP~p~~~~~~~~~e~ee~~~ECa-ICys~~l~~g~lPd 326 (381)
T 3k1l_B 263 VLSDGLSNWDSEMNIHKNLLRMFDLCYFPMPDWSDGPKLDEEDNEELRCN-ICFAYRLDGGEVPL 326 (381)
T ss_dssp HHHHHHHTCCTTSCHHHHHHHHTTCSSCCCCCGGGCCSCTTCCCSCCSCS-SSCCSSCTTCCCCC
T ss_pred HHhhhhhhcCccCCHHHHHHHHhCccccCCCcccccccccccccCCccCc-ccceeecCCCCCcc
Confidence 99999999999999999 4 99997776532 223456886 89998887 78883
No 3
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=96.54 E-value=0.014 Score=46.50 Aligned_cols=83 Identities=11% Similarity=0.173 Sum_probs=61.4
Q ss_pred HHHHHHHHHhcccee--e-----eecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCCc---ee--
Q 027371 17 RSVYSEIEEVGWEHL--V-----RLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPYI---FN-- 79 (224)
Q Consensus 17 s~li~Eie~iGW~kl--~-----~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~~---f~-- 79 (224)
.+|.+|+.++.-+.. + -.+.|+...+..+.... |....++|.+|.+||.+||.+...=|.- .+
T Consensus 25 ~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~ 104 (136)
T 2a7l_A 25 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVY 104 (136)
T ss_dssp HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCC
Confidence 899999999853311 1 23567888888887443 5899999999999999999987544431 11
Q ss_pred -----------cccCccCcHHHHHHHHHHHH
Q 027371 80 -----------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 80 -----------~~W~~~ssL~~v~~qF~~~L 99 (224)
-.|+|..++..|+...+..|
T Consensus 105 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL 135 (136)
T 2a7l_A 105 SNGHICLSILTEDWSPALSVQSVCLSIISML 135 (136)
T ss_dssp TTCBBCCGGGTTTCCTTSCHHHHHHHHHHHT
T ss_pred CCCeEEchhcCCCCCCCCcHHHHHHHHHHHh
Confidence 17999989998888777654
No 4
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=96.46 E-value=0.048 Score=43.07 Aligned_cols=86 Identities=12% Similarity=0.139 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHhccce-----eeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCCce--e--
Q 027371 14 SFSRSVYSEIEEVGWEH-----LVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPYIF--N-- 79 (224)
Q Consensus 14 ~fys~li~Eie~iGW~k-----l~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~~f--~-- 79 (224)
.-..+|.+|+.++.=+. +.-.+.++...+..+.... |....++|.+|.+||.+||.+...=|..+ +
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 99 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVY 99 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 44689999999984331 2223567888888887432 78999999999999999999875544211 1
Q ss_pred -----------cccCccCcHHHHHHHHHHHH
Q 027371 80 -----------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 80 -----------~~W~~~ssL~~v~~qF~~~L 99 (224)
-.|+|..++..|+...+..|
T Consensus 100 ~~G~ICl~iL~~~WsP~~ti~~vL~si~sll 130 (136)
T 2h2y_A 100 SNGDICLSVLGDDYNPSLSISGLILSIISML 130 (136)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCEEECccccCCCCCCCcHHHHHHHHHHHH
Confidence 17999999999888877765
No 5
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=96.41 E-value=0.039 Score=42.90 Aligned_cols=85 Identities=12% Similarity=0.151 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCCce--e----
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPYIF--N---- 79 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~~f--~---- 79 (224)
..+|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.++.+||.+||.+...=|..+ +
T Consensus 8 ~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~ 87 (125)
T 2fo3_A 8 NYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSN 87 (125)
T ss_dssp -CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCC
Confidence 36899999988432 12223567888888887432 78999999999999999999875544211 1
Q ss_pred ---------cccCccCcHHHHHHHHHHHHH
Q 027371 80 ---------LKWSRKSRLKDLLQQFREHLE 100 (224)
Q Consensus 80 ---------~~W~~~ssL~~v~~qF~~~Le 100 (224)
-.|++..++..|+...+..|.
T Consensus 88 G~iCl~iL~~~W~P~~~i~~vl~si~~ll~ 117 (125)
T 2fo3_A 88 GDICLSLLGDDYNPSLSISGLVLSIISMLS 117 (125)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHHHHHHHHC
T ss_pred CEEEchhcCCCCCCCCcHHHHHHHHHHHHh
Confidence 179999999999888877764
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=96.37 E-value=0.042 Score=44.92 Aligned_cols=93 Identities=16% Similarity=0.339 Sum_probs=65.0
Q ss_pred cccCCCchhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC
Q 027371 7 RESANSSSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY 76 (224)
Q Consensus 7 ~~~~~~~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~ 76 (224)
++....+.--.+|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 14 ~~~~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 93 (166)
T 2ayv_A 14 RENLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKI 93 (166)
T ss_dssp -----CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred cccccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCC
Confidence 33444455668999999998432 22334567888888888432 789999999999999999998754442
Q ss_pred ---------c-----eecccCccCcHHHHHHHHHHHH
Q 027371 77 ---------I-----FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ---------~-----f~~~W~~~ssL~~v~~qF~~~L 99 (224)
. +.-.|+|..+|..|+...+..|
T Consensus 94 ~HPNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll 130 (166)
T 2ayv_A 94 YHPNINSQGAICLDILKDQWSPALTISKVLLSISSLL 130 (166)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred cCCcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHH
Confidence 0 1117999999988887777665
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=96.20 E-value=0.041 Score=44.00 Aligned_cols=84 Identities=12% Similarity=0.313 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC---------
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY--------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~--------- 76 (224)
-.+|.+|+.++.=+ .+.-.+.++...+..+... .|....++|.+|.+||.+||.|...=|.
T Consensus 6 ~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 85 (152)
T 2aak_A 6 RKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADG 85 (152)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTS
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCC
Confidence 47899999988422 2233466788888888753 4788999999999999999998754431
Q ss_pred c-----eecccCccCcHHHHHHHHHHHH
Q 027371 77 I-----FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ~-----f~~~W~~~ssL~~v~~qF~~~L 99 (224)
. +.-.|+|..+|..|+...+..|
T Consensus 86 ~iCl~iL~~~W~p~~~i~~vl~~i~~ll 113 (152)
T 2aak_A 86 SICLDILQNQWSPIYDVAAILTSIQSLL 113 (152)
T ss_dssp BBCCGGGTTSCCTTCCHHHHHHHHHHHH
T ss_pred EEechhhcCCCCCCCcHHHHHHHHHHHH
Confidence 0 0116999889988877766655
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=96.18 E-value=0.053 Score=43.72 Aligned_cols=90 Identities=21% Similarity=0.331 Sum_probs=65.6
Q ss_pred CCCchhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC---
Q 027371 10 ANSSSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY--- 76 (224)
Q Consensus 10 ~~~~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~--- 76 (224)
.-++..-++|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 9 ~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 88 (158)
T 1zdn_A 9 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHP 88 (158)
T ss_dssp CSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccC
Confidence 34556688999999998533 12223567888888887433 678999999999999999999865552
Q ss_pred ------ce-----ecccCccCcHHHHHHHHHHHH
Q 027371 77 ------IF-----NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ------~f-----~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+ .-.|+|..++..|+...+..|
T Consensus 89 nv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 122 (158)
T 1zdn_A 89 NVGANGEICVNVLKRDWTAELGIRHVLLTIKCLL 122 (158)
T ss_dssp TBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHH
Confidence 00 117999889988877766655
No 9
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=96.12 E-value=0.058 Score=43.14 Aligned_cols=85 Identities=15% Similarity=0.336 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC---------
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY--------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~--------- 76 (224)
.++|.+|+.++.-+ .+.-.+.|+...+..+... .|....++|.++.+||.+||.|...=|.
T Consensus 6 ~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G 85 (151)
T 4gpr_A 6 MRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNG 85 (151)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCC
Confidence 57999999998533 2233466899999998843 2788999999999999999998755442
Q ss_pred c-----eecccCccCcHHHHHHHHHHHHH
Q 027371 77 I-----FNLKWSRKSRLKDLLQQFREHLE 100 (224)
Q Consensus 77 ~-----f~~~W~~~ssL~~v~~qF~~~Le 100 (224)
. +.-.|++..++..|+...+..|.
T Consensus 86 ~iCl~iL~~~W~p~~~i~~vl~~i~~ll~ 114 (151)
T 4gpr_A 86 VICLDILKDQWSPALTLSRVLLSISSLLT 114 (151)
T ss_dssp BBCCGGGTTTCCTTCCHHHHHHHHHHHHH
T ss_pred EEEcccccCCCCCCCcHHHHHHHHHHHhc
Confidence 0 11279999999988877766653
No 10
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=96.07 E-value=0.046 Score=44.57 Aligned_cols=87 Identities=20% Similarity=0.308 Sum_probs=61.7
Q ss_pred chhHHHHHHHHHHhccce-----eeeecC-----CcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC-
Q 027371 13 SSFSRSVYSEIEEVGWEH-----LVRLSE-----DLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY- 76 (224)
Q Consensus 13 ~~fys~li~Eie~iGW~k-----l~~id~-----~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~- 76 (224)
.+=-.+|.+|+.++.-+. +.-.+. ++......+.... |....++|.++.+||.+||.|...=|.
T Consensus 9 ~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~ 88 (163)
T 3rcz_B 9 SLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLF 88 (163)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 344689999999986442 222222 6777788887543 688999999999999999998755441
Q ss_pred --------ce-----ec--ccCccCcHHHHHHHHHHHH
Q 027371 77 --------IF-----NL--KWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 --------~f-----~~--~W~~~ssL~~v~~qF~~~L 99 (224)
.+ .- .|++..++..|+...+..|
T Consensus 89 HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll 126 (163)
T 3rcz_B 89 HPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLL 126 (163)
T ss_dssp STTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHH
T ss_pred cCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHH
Confidence 01 11 3999999988877766655
No 11
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=96.06 E-value=0.054 Score=43.21 Aligned_cols=83 Identities=20% Similarity=0.370 Sum_probs=60.5
Q ss_pred HHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC---------c
Q 027371 17 RSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY---------I 77 (224)
Q Consensus 17 s~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~---------~ 77 (224)
++|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|. .
T Consensus 4 ~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~ 83 (149)
T 2r0j_A 4 RRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGR 83 (149)
T ss_dssp HHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCB
T ss_pred HHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCE
Confidence 6889999988433 22234566888888876432 789999999999999999998765442 0
Q ss_pred -----eecccCccCcHHHHHHHHHHHH
Q 027371 78 -----FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 -----f~~~W~~~ssL~~v~~qF~~~L 99 (224)
+.-.|+|..++..|+...+..|
T Consensus 84 iCl~iL~~~W~p~~~i~~vl~~i~~ll 110 (149)
T 2r0j_A 84 ICLDILKDKWSPALQIRTVLLSIQALL 110 (149)
T ss_dssp BCCGGGTTTCCTTSCHHHHHHHHHHHH
T ss_pred EechhcCCCCCCCCcHHHHHHHHHHHH
Confidence 1117999999988887776665
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=96.05 E-value=0.072 Score=43.42 Aligned_cols=87 Identities=17% Similarity=0.363 Sum_probs=64.2
Q ss_pred chhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC------
Q 027371 13 SSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY------ 76 (224)
Q Consensus 13 ~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~------ 76 (224)
+.--.+|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~ 97 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 97 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCC
Confidence 34468999999998533 22334667888888887432 688999999999999999999765552
Q ss_pred --------ceecccCccCcHHHHHHHHHHHH
Q 027371 77 --------IFNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 --------~f~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+.-.|+|..+|..|+...+..|
T Consensus 98 ~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll 128 (165)
T 2c4o_A 98 SNGSICLDILRSQWSPALTISKVLLSICSLL 128 (165)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCeEeehhhcCCCCCcCcHHHHHHHHHHHH
Confidence 01127999999988887776665
No 13
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=96.01 E-value=0.07 Score=42.86 Aligned_cols=88 Identities=14% Similarity=0.255 Sum_probs=63.0
Q ss_pred CchhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCCc----
Q 027371 12 SSSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPYI---- 77 (224)
Q Consensus 12 ~~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~~---- 77 (224)
+..--.+|.+|+.++.=+ .+.-.+.++......+... .|....++|.+|.+||.+||.|...=|.-
T Consensus 7 ~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 7 RHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 344568999999988532 1222355788888888743 27889999999999999999987654421
Q ss_pred ----------eecccCccCcHHHHHHHHHHHH
Q 027371 78 ----------FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 ----------f~~~W~~~ssL~~v~~qF~~~L 99 (224)
+.-.|+|..++..|+...+..|
T Consensus 87 ~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll 118 (156)
T 2e2c_A 87 DQSGNICLDILKENWTASYDVRTILLSLQSLL 118 (156)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHT
T ss_pred ccCceEECccccccCCCCCcHHHHHHHHHHHH
Confidence 0116999999988887666555
No 14
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=95.99 E-value=0.089 Score=43.14 Aligned_cols=92 Identities=17% Similarity=0.239 Sum_probs=66.0
Q ss_pred ccCCCchhHHHHHHHHHHhccc-----eeeeec-CCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC
Q 027371 8 ESANSSSFSRSVYSEIEEVGWE-----HLVRLS-EDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY 76 (224)
Q Consensus 8 ~~~~~~~fys~li~Eie~iGW~-----kl~~id-~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~ 76 (224)
.|+.......+|.+|+.++.=+ .+.-.+ .++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 11 ~~~~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i 90 (172)
T 2awf_A 11 SSGLVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 90 (172)
T ss_dssp --CCCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred cCCChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCC
Confidence 3556677788999999998433 122234 57888888887533 789999999999999999998754442
Q ss_pred --------------cee-------------cccCccCcHHHHHHHHHHHH
Q 027371 77 --------------IFN-------------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 --------------~f~-------------~~W~~~ssL~~v~~qF~~~L 99 (224)
.+. -.|+|..+|..|+...+..|
T Consensus 91 ~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll 140 (172)
T 2awf_A 91 WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISML 140 (172)
T ss_dssp CCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHH
Confidence 011 25999889988887776665
No 15
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=95.98 E-value=0.06 Score=42.92 Aligned_cols=84 Identities=19% Similarity=0.419 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC---------
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY--------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~--------- 76 (224)
-++|.+|+.++.=+ .+.-.+.++...+..+... .|....++|.+|.+||.+||.|...=|.
T Consensus 6 ~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 85 (150)
T 1z2u_A 6 LKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 85 (150)
T ss_dssp HHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCC
Confidence 47899999998422 2233456688888887743 2788999999999999999998765442
Q ss_pred -----ceecccCccCcHHHHHHHHHHHH
Q 027371 77 -----IFNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -----~f~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+.-.|+|..++..|+...+..|
T Consensus 86 ~iCl~iL~~~W~p~~~i~~vl~~i~~ll 113 (150)
T 1z2u_A 86 SICLDILRSQWSPALTISKVLLSICSLL 113 (150)
T ss_dssp BBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred eEeeccccCCCCCCCCHHHHHHHHHHHh
Confidence 01117999999988887776665
No 16
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=95.86 E-value=0.06 Score=43.24 Aligned_cols=83 Identities=14% Similarity=0.333 Sum_probs=60.4
Q ss_pred HHHHHHHHHhccc-----eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC---------c
Q 027371 17 RSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY---------I 77 (224)
Q Consensus 17 s~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~---------~ 77 (224)
.+|.+|+.++.=+ .+.-.+.++...+..+... .|....++|.+|.+||.+||.|...=|. .
T Consensus 8 ~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~ 87 (155)
T 1jat_A 8 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGR 87 (155)
T ss_dssp HHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCC
T ss_pred HHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCE
Confidence 7899999988422 2333456688888888743 2788999999999999999998754441 0
Q ss_pred e-----ecccCccCcHHHHHHHHHHHH
Q 027371 78 F-----NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 f-----~~~W~~~ssL~~v~~qF~~~L 99 (224)
+ .-.|++..++..|+...+..|
T Consensus 88 iCl~iL~~~W~p~~~i~~vl~~i~~ll 114 (155)
T 1jat_A 88 ICLDVLKTNWSPALQIRTVLLSIQALL 114 (155)
T ss_dssp BCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred EEchhhccCCCCCCCHHHHHHHHHHHH
Confidence 0 117999999988887766655
No 17
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=95.84 E-value=0.093 Score=42.27 Aligned_cols=84 Identities=20% Similarity=0.341 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhcc-----c---eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC----c-
Q 027371 16 SRSVYSEIEEVGW-----E---HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY----I- 77 (224)
Q Consensus 16 ys~li~Eie~iGW-----~---kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~----~- 77 (224)
-.+|.+|+.++.- . .+.-.+.++...+..+... .|....++|.+|.+||.+||.|...=|. .
T Consensus 10 ~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 89 (159)
T 2bep_A 10 VQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNIS 89 (159)
T ss_dssp HHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCC
Confidence 4789999988843 1 2233466799999888742 2778999999999999999998765431 0
Q ss_pred -----e--e---cccCccCcHHHHHHHHHHHH
Q 027371 78 -----F--N---LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 -----f--~---~~W~~~ssL~~v~~qF~~~L 99 (224)
+ . -.|+|..++..|+...+..|
T Consensus 90 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 121 (159)
T 2bep_A 90 SVTGAICLDILKDQWAAAMTLRTVLLSLQALL 121 (159)
T ss_dssp TTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCCEEeChhhhccCCCCCcHHHHHHHHHHHH
Confidence 1 1 15999999988887777666
No 18
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=95.83 E-value=0.094 Score=42.31 Aligned_cols=84 Identities=15% Similarity=0.255 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhccc-----eeeeecC-CcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC--------
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSE-DLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY-------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~-~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~-------- 76 (224)
.++|.+|+.++.=+ .+.-.+. ++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 5 ~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~ 84 (164)
T 3h8k_A 5 LKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPD 84 (164)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCC
Confidence 57899999998533 1222444 8999999988432 688999999999999999998754441
Q ss_pred ------cee-------------cccCccCcHHHHHHHHHHHH
Q 027371 77 ------IFN-------------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ------~f~-------------~~W~~~ssL~~v~~qF~~~L 99 (224)
.+. -.|+|..++..|+...+..|
T Consensus 85 G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll 126 (164)
T 3h8k_A 85 GRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSML 126 (164)
T ss_dssp SBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHH
T ss_pred CcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHH
Confidence 011 25999889998887777665
No 19
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=95.82 E-value=0.064 Score=43.06 Aligned_cols=84 Identities=17% Similarity=0.308 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC---------
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY--------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~--------- 76 (224)
-++|.+|+.++.-+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 7 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 86 (154)
T 2c2v_B 7 PRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLG 86 (154)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCC
Confidence 37899999988533 12334567888888887422 788999999999999999998765542
Q ss_pred c-----eecccCccCcHHHHHHHHHHHH
Q 027371 77 I-----FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ~-----f~~~W~~~ssL~~v~~qF~~~L 99 (224)
. +.-.|+|..+|..|+...+..|
T Consensus 87 ~iCl~iL~~~W~p~~~i~~vl~~i~~ll 114 (154)
T 2c2v_B 87 RICLDILKDKWSPALQIRTVLLSIQALL 114 (154)
T ss_dssp BBCCHHHHTSCCTTCCHHHHHHHHHHHT
T ss_pred eEEchhccCCCCCCCcHHHHHHHHHHHH
Confidence 0 0127999889988877666554
No 20
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=95.81 E-value=0.088 Score=43.86 Aligned_cols=89 Identities=16% Similarity=0.320 Sum_probs=64.2
Q ss_pred CchhHHHHHHHHHHhcc--------ceeeeecCCcceEEEEEEe--CC----C-----------CEEEEEEEecCCCCCC
Q 027371 12 SSSFSRSVYSEIEEVGW--------EHLVRLSEDLKFLSFRVID--KK----G-----------RVHCMEIQLDKNYPRS 66 (224)
Q Consensus 12 ~~~fys~li~Eie~iGW--------~kl~~id~~ls~i~l~~~D--~~----g-----------R~H~l~v~l~~~yP~~ 66 (224)
+..-..+|.+|+.++.- -.+.-.+.++...++.+.. .. | ....++|.+|.+||.+
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~ 104 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFD 104 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCC
Confidence 34457899999998743 2333356678888888874 21 2 6788999999999999
Q ss_pred CCceeecCCCc------------ee-c---ccCccCcHHHHHHHHHHHHH
Q 027371 67 PPSISADVPYI------------FN-L---KWSRKSRLKDLLQQFREHLE 100 (224)
Q Consensus 67 ~P~~~~dlP~~------------f~-~---~W~~~ssL~~v~~qF~~~Le 100 (224)
||.|..-=|.- +. + .|+|..++..|+...+..|.
T Consensus 105 PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~ 154 (186)
T 1zuo_A 105 PPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLV 154 (186)
T ss_dssp CCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHc
Confidence 99887544421 01 1 59999999999888887764
No 21
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=95.74 E-value=0.081 Score=43.31 Aligned_cols=84 Identities=13% Similarity=0.341 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC---------
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY--------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~--------- 76 (224)
-.+|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 6 ~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G 85 (169)
T 1ayz_A 6 RRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANG 85 (169)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTS
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCC
Confidence 47999999998433 22334667888877777432 788999999999999999998755442
Q ss_pred -----ceecccCccCcHHHHHHHHHHHH
Q 027371 77 -----IFNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -----~f~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+.-.|+|..+|..|+...+..|
T Consensus 86 ~ICl~iL~~~WsP~~~i~~vL~si~~ll 113 (169)
T 1ayz_A 86 EICLDILQNRWTPTYDVASILTSIQSLF 113 (169)
T ss_dssp BBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred eEeehhhccCCCCcCcHHHHHHHHHHHH
Confidence 01116999888988877665554
No 22
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=95.66 E-value=0.097 Score=41.66 Aligned_cols=83 Identities=27% Similarity=0.394 Sum_probs=60.0
Q ss_pred HHHHHHHHHhccc-----eeeeecC-CcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC----c----
Q 027371 17 RSVYSEIEEVGWE-----HLVRLSE-DLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY----I---- 77 (224)
Q Consensus 17 s~li~Eie~iGW~-----kl~~id~-~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~----~---- 77 (224)
.+|.+|+.++.=+ .+.-.+. ++...+..+... .|....++|.+|.+||.+||.|...=+. .
T Consensus 4 ~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~ 83 (149)
T 1fxt_A 4 KRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVT 83 (149)
T ss_dssp HHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCC
Confidence 6889999988432 2233345 789999888742 2788999999999999999998765431 0
Q ss_pred ee-------cccCccCcHHHHHHHHHHHH
Q 027371 78 FN-------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 f~-------~~W~~~ssL~~v~~qF~~~L 99 (224)
-. -.|+|..++..|+...+..|
T Consensus 84 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 112 (149)
T 1fxt_A 84 GAICLDILKNAWSPVITLKSALISLQALL 112 (149)
T ss_dssp CCBCCHHHHTSCCTTCCHHHHHHHHHHHH
T ss_pred CeEeCCcCCCCCCCCCcHHHHHHHHHHHH
Confidence 01 16999889988887766655
No 23
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=95.61 E-value=0.1 Score=41.85 Aligned_cols=83 Identities=16% Similarity=0.255 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhccc-----ee-eeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC--------
Q 027371 16 SRSVYSEIEEVGWE-----HL-VRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY-------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl-~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~-------- 76 (224)
-.+|.+|+.++.-+ .+ .-.+.++...+..+. .. |....++|.++.+||.+||.|...=|.
T Consensus 6 ~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~ 84 (155)
T 1wzv_A 6 SMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDEN 84 (155)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCC
Confidence 36899999988432 22 223567888888887 43 578899999999999999998755442
Q ss_pred ------ce-ecccCccCcHHHHHHHHHHHH
Q 027371 77 ------IF-NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ------~f-~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+ .-.|+|..+|..|+...+..|
T Consensus 85 G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll 114 (155)
T 1wzv_A 85 GQICLPIISSENWKPCTKTCQVLEALNVLV 114 (155)
T ss_dssp CBCCCGGGCTTTCCTTCCHHHHHHHHHHHH
T ss_pred CeEeecCCCccCCCCCCcHHHHHHHHHHHH
Confidence 11 126999889988887766655
No 24
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=95.60 E-value=0.11 Score=43.50 Aligned_cols=87 Identities=16% Similarity=0.337 Sum_probs=63.4
Q ss_pred chhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC------
Q 027371 13 SSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY------ 76 (224)
Q Consensus 13 ~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~------ 76 (224)
+.--.+|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 34578999999998533 12223567888888887543 789999999999999999998754442
Q ss_pred --------ceecccCccCcHHHHHHHHHHHH
Q 027371 77 --------IFNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 --------~f~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+.-.|+|..+|..|+...+..|
T Consensus 127 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll 157 (194)
T 3bzh_A 127 SQGVICLDILKDNWSPALTISKVLLSICSLL 157 (194)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCceechhhhccCCCcCcHHHHHHHHHHHH
Confidence 01116999989988887766655
No 25
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=95.51 E-value=0.15 Score=42.57 Aligned_cols=84 Identities=20% Similarity=0.328 Sum_probs=62.1
Q ss_pred HHHHHHHHHHhccc--------eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC----c-
Q 027371 16 SRSVYSEIEEVGWE--------HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY----I- 77 (224)
Q Consensus 16 ys~li~Eie~iGW~--------kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~----~- 77 (224)
.++|.+|+.++.-+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|. .
T Consensus 7 ~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 86 (201)
T 3k9o_A 7 VQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNIS 86 (201)
T ss_dssp HHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCc
Confidence 47899999988432 23445678999999988432 788999999999999999998755431 0
Q ss_pred ----------eecccCccCcHHHHHHHHHHHH
Q 027371 78 ----------FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 ----------f~~~W~~~ssL~~v~~qF~~~L 99 (224)
+.-.|+|..+|..|+...+..|
T Consensus 87 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 118 (201)
T 3k9o_A 87 SVTGAICLDILKDQWAAAMTLRTVLLSLQALL 118 (201)
T ss_dssp TTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCCeeeCcccccCCCCCCCHHHHHHHHHHHh
Confidence 1127999999988877666555
No 26
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=95.49 E-value=0.15 Score=41.23 Aligned_cols=84 Identities=17% Similarity=0.317 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhccce-----eeeec-CCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC--------
Q 027371 16 SRSVYSEIEEVGWEH-----LVRLS-EDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY-------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~k-----l~~id-~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~-------- 76 (224)
-++|.+|+.++.=+. +.-.+ .++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 6 ~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 85 (165)
T 2ucz_A 6 QKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPN 85 (165)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCC
Confidence 578999999885331 22234 57888888887543 688999999999999999998754431
Q ss_pred ------ce-------------ecccCccCcHHHHHHHHHHHH
Q 027371 77 ------IF-------------NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ------~f-------------~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+ .-.|+|..++..|+...+..|
T Consensus 86 G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll 127 (165)
T 2ucz_A 86 GEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSML 127 (165)
T ss_dssp SBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHH
T ss_pred CcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHH
Confidence 11 126999889988887776665
No 27
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=95.38 E-value=0.15 Score=42.41 Aligned_cols=90 Identities=13% Similarity=0.220 Sum_probs=60.6
Q ss_pred CCCchhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC---
Q 027371 10 ANSSSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY--- 76 (224)
Q Consensus 10 ~~~~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~--- 76 (224)
..+..--.+|.+|+.++.=+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~~~~~ 89 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRF 89 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCSSB
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCCCcee
Confidence 44556678999999998533 22233567888888887432 778899999999999999998754441
Q ss_pred ---------ce---ecccCccCcHHHHHHHHHHHH
Q 027371 77 ---------IF---NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ---------~f---~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+ .-.|+|..++..|+...+..|
T Consensus 90 ~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll 124 (187)
T 2f4w_A 90 KCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFM 124 (187)
T ss_dssp CTTSCBC----------CCTTCCHHHHHHHHHHHH
T ss_pred ccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHh
Confidence 11 126999889988866655554
No 28
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=95.38 E-value=0.13 Score=43.86 Aligned_cols=91 Identities=18% Similarity=0.224 Sum_probs=65.4
Q ss_pred cCCCchhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC--
Q 027371 9 SANSSSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY-- 76 (224)
Q Consensus 9 ~~~~~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~-- 76 (224)
....+.--.+|.+|+.++.-+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 18 ~~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 18 YFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp -CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 334455578999999998533 23334667999999887433 688999999999999999998754431
Q ss_pred --c------eec-----ccCccCcHHHHHHHHHHHH
Q 027371 77 --I------FNL-----KWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 --~------f~~-----~W~~~ssL~~v~~qF~~~L 99 (224)
. +.+ .|+|..+|..|+...+..|
T Consensus 98 PNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL 133 (216)
T 2pwq_A 98 PNISSQTGAICLDVLKNEWSPALTIRTALLSIQALL 133 (216)
T ss_dssp TTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHH
T ss_pred CCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHH
Confidence 1 111 5999989988877766655
No 29
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=95.37 E-value=0.13 Score=42.55 Aligned_cols=88 Identities=14% Similarity=0.211 Sum_probs=61.6
Q ss_pred CchhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCCc----
Q 027371 12 SSSFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPYI---- 77 (224)
Q Consensus 12 ~~~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~~---- 77 (224)
+..--.+|.+|+.++.-+ .+.-.+.++......+.... |....++|.+|.+||.+||.|...=|.-
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 345578999999987533 11223456777777777433 6899999999999999999987654420
Q ss_pred ----------eecccCccCcHHHHHHHHHHHH
Q 027371 78 ----------FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 ----------f~~~W~~~ssL~~v~~qF~~~L 99 (224)
+.-.|++..+|..|+...+..|
T Consensus 108 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll 139 (179)
T 1i7k_A 108 DTQGNISLDILKEKWSALYDVRTILLSIQSLL 139 (179)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccCCeEEcccCcCcCCCCCCHHHHHHHHHHHH
Confidence 1116999989988877666655
No 30
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=95.36 E-value=0.21 Score=40.66 Aligned_cols=86 Identities=15% Similarity=0.276 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC-------
Q 027371 14 SFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY------- 76 (224)
Q Consensus 14 ~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~------- 76 (224)
+--.+|.+|+.++.-+ .+.-.+.++...+..+.... |....++|.+|.+||.+||.|...=|.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 83 (169)
T 1yh2_A 4 QRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDS 83 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCc
Confidence 3457999999998432 12223567888888887532 789999999999999999998755442
Q ss_pred -------cee----cccCccCcHHHHHHHHHHHH
Q 027371 77 -------IFN----LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -------~f~----~~W~~~ssL~~v~~qF~~~L 99 (224)
.+. -.|++..+|..|+...+..|
T Consensus 84 ~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll 117 (169)
T 1yh2_A 84 AGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLM 117 (169)
T ss_dssp TCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHH
T ss_pred CCeEecccccCCcccCCCCCCcHHHHHHHHHHHH
Confidence 111 26999889988876666555
No 31
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=95.34 E-value=0.11 Score=42.14 Aligned_cols=83 Identities=12% Similarity=0.317 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhccce-----------------eeeecCCcceEEEEEEeCC-------CCEEEEEEEecCCCCCCCCcee
Q 027371 16 SRSVYSEIEEVGWEH-----------------LVRLSEDLKFLSFRVIDKK-------GRVHCMEIQLDKNYPRSPPSIS 71 (224)
Q Consensus 16 ys~li~Eie~iGW~k-----------------l~~id~~ls~i~l~~~D~~-------gR~H~l~v~l~~~yP~~~P~~~ 71 (224)
.++|.+|+.++.=+. +.-.+.++...++.+.... |....++|.++.+||.+||.|.
T Consensus 10 ~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~ 89 (167)
T 4ds2_A 10 NKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVR 89 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEE
Confidence 468888888875432 2233667899999988432 7889999999999999999987
Q ss_pred ecCCCcee---------------cccCccCcHHHHHHHHHHHH
Q 027371 72 ADVPYIFN---------------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 72 ~dlP~~f~---------------~~W~~~ssL~~v~~qF~~~L 99 (224)
..=|. |. -.|++..++..++-+....|
T Consensus 90 f~t~i-~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l 131 (167)
T 4ds2_A 90 FVTPV-YSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRV 131 (167)
T ss_dssp ESSCC-CCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHH
T ss_pred EeCCc-ccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHH
Confidence 65552 11 27999888888766555544
No 32
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=95.29 E-value=0.15 Score=41.71 Aligned_cols=86 Identities=16% Similarity=0.235 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC----c--
Q 027371 14 SFSRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY----I-- 77 (224)
Q Consensus 14 ~fys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~----~-- 77 (224)
.-..+|.+|+.++.=+ .+.-.+.++......+.... |....++|.+|.+||.+||.|...=|. .
T Consensus 23 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 102 (169)
T 1yrv_A 23 RAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDP 102 (169)
T ss_dssp HHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccC
Confidence 3468999999988422 22335677999999887432 788999999999999999998754431 1
Q ss_pred ---------ee--cccCccCcHHHHHHHHHHHH
Q 027371 78 ---------FN--LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 78 ---------f~--~~W~~~ssL~~v~~qF~~~L 99 (224)
+. -.|+|..+|..|+...+..|
T Consensus 103 ~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll 135 (169)
T 1yrv_A 103 HTGQPCIDFLDNPEKWNTNYTLSSILLALQVML 135 (169)
T ss_dssp TTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHH
T ss_pred CCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHH
Confidence 11 26999888888877766655
No 33
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=95.23 E-value=0.17 Score=40.95 Aligned_cols=84 Identities=25% Similarity=0.435 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhccce-----eeee-c-C--CcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC-----
Q 027371 16 SRSVYSEIEEVGWEH-----LVRL-S-E--DLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY----- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~k-----l~~i-d-~--~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~----- 76 (224)
-.+|.+|+.++.-+. -+.. + . ++...+..+.... |....++|.+|.+||.+||.+...=|.
T Consensus 23 ~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV 102 (156)
T 2q0v_A 23 SFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCV 102 (156)
T ss_dssp HHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTB
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCC
Confidence 479999999986441 1222 2 2 4888888887432 789999999999999999998754431
Q ss_pred ----ce-----e--cccCccCcHHHHHHHHHHHH
Q 027371 77 ----IF-----N--LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ----~f-----~--~~W~~~ssL~~v~~qF~~~L 99 (224)
.+ . -.|+|..+|..|+...+..|
T Consensus 103 ~~~G~icisCL~iL~~WsP~~ti~~vL~sI~~ll 136 (156)
T 2q0v_A 103 DNCGRVIKNNLHILKNWNRNYTIETILISLRQEM 136 (156)
T ss_dssp CTTSBBCGGGSHHHHTCCTTCCHHHHHHHHHHHT
T ss_pred ccCCeEehhhcccccCCCCcCcHHHHHHHHHHHH
Confidence 11 1 16999989988877666655
No 34
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=95.18 E-value=0.16 Score=40.77 Aligned_cols=84 Identities=20% Similarity=0.375 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhcccee----ee-e-c----CCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC----
Q 027371 16 SRSVYSEIEEVGWEHL----VR-L-S----EDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY---- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~kl----~~-i-d----~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~---- 76 (224)
.++|.+|+.++.-+.. +. . + .++...+..+.... |....++|.+|.+||.+||.|...=+.
T Consensus 6 ~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 85 (157)
T 2gjd_A 6 LQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPN 85 (157)
T ss_dssp HHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCC
Confidence 4789999998853321 11 1 1 35666677776422 678899999999999999998754331
Q ss_pred ----------ceec--ccCccCcHHHHHHHHHHHH
Q 027371 77 ----------IFNL--KWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ----------~f~~--~W~~~ssL~~v~~qF~~~L 99 (224)
.+.- .|+|..+|..|+...+..|
T Consensus 86 v~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll 120 (157)
T 2gjd_A 86 VYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLL 120 (157)
T ss_dssp BCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHH
Confidence 1111 5999999988877766655
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=95.11 E-value=0.1 Score=41.77 Aligned_cols=83 Identities=17% Similarity=0.346 Sum_probs=58.7
Q ss_pred HHHHHHHHHhccc-----eeeee-cCCcceEEEEEEeC----CCCEEEEEEEecCCCCCCCCceeecCCC----------
Q 027371 17 RSVYSEIEEVGWE-----HLVRL-SEDLKFLSFRVIDK----KGRVHCMEIQLDKNYPRSPPSISADVPY---------- 76 (224)
Q Consensus 17 s~li~Eie~iGW~-----kl~~i-d~~ls~i~l~~~D~----~gR~H~l~v~l~~~yP~~~P~~~~dlP~---------- 76 (224)
.+|.+|+.++.-+ .++.. +.++...++.+.-. .|....++|.+|.+||.+||.|...=|.
T Consensus 5 ~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~ 84 (154)
T 1c4z_D 5 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQ 84 (154)
T ss_dssp TTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEECCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCB
T ss_pred HHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEeCCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCE
Confidence 4788999988533 12333 45788888887611 2677889999999999999998765442
Q ss_pred ----cee-cccCccCcHHHHHHHHHHHH
Q 027371 77 ----IFN-LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ----~f~-~~W~~~ssL~~v~~qF~~~L 99 (224)
.+. -.|++..++..|+...+..|
T Consensus 85 iCl~iL~~~~W~p~~~i~~vl~~i~~ll 112 (154)
T 1c4z_D 85 VCLPVISAENWKPATKTDQVIQSLIALV 112 (154)
T ss_dssp BCCTTTSSSSCCTTCCHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 011 26999889988877766555
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=95.10 E-value=0.2 Score=40.47 Aligned_cols=87 Identities=13% Similarity=0.295 Sum_probs=60.5
Q ss_pred chhHHHHHHHHHHhccce--eee--ecCCcceEEEEEEeC----CCCEEEEEEEecCCCCCCCCceeecCCC--------
Q 027371 13 SSFSRSVYSEIEEVGWEH--LVR--LSEDLKFLSFRVIDK----KGRVHCMEIQLDKNYPRSPPSISADVPY-------- 76 (224)
Q Consensus 13 ~~fys~li~Eie~iGW~k--l~~--id~~ls~i~l~~~D~----~gR~H~l~v~l~~~yP~~~P~~~~dlP~-------- 76 (224)
+.--.+|.+|+.++.=.. -+. .+.++....+.+--. .|....++|.+|.+||.+||.|...=|.
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (160)
T 1y8x_A 5 SAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLE 84 (160)
T ss_dssp CHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEECCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred cHHHHHHHHHHHhcCCCCCeEEEeccCCccceEEEEECCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCC
Confidence 445689999999983111 122 246688887776221 1677899999999999999998765552
Q ss_pred -c--e---ecccCccCcHHHHHHHHHHHH
Q 027371 77 -I--F---NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -~--f---~~~W~~~ssL~~v~~qF~~~L 99 (224)
. + .-.|+|..++..|+...+..|
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 113 (160)
T 1y8x_A 85 GNVCLNILREDWKPVLTINSIIYGLQYLF 113 (160)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred CeEEcccchhhccCCCCHHHHHHHHHHHH
Confidence 0 1 126999889988887776655
No 37
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=95.05 E-value=0.34 Score=38.09 Aligned_cols=83 Identities=20% Similarity=0.366 Sum_probs=58.5
Q ss_pred HHHHHHHHHhccce-----eeee-c-C--CcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC------
Q 027371 17 RSVYSEIEEVGWEH-----LVRL-S-E--DLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY------ 76 (224)
Q Consensus 17 s~li~Eie~iGW~k-----l~~i-d-~--~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~------ 76 (224)
.+|.+|+.++.-+. -+.. + . ++...+..+.... |....++|.++.+||.+||.+...=|.
T Consensus 9 ~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 88 (138)
T 1jat_B 9 FRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVN 88 (138)
T ss_dssp HHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEe
Confidence 69999999985441 1223 2 2 3778888877332 788999999999999999988654331
Q ss_pred ----c----ee--cccCccCcHHHHHHHHHHHH
Q 027371 77 ----I----FN--LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ----~----f~--~~W~~~ssL~~v~~qF~~~L 99 (224)
. +. -.|++..++..|+...+..|
T Consensus 89 ~~~G~i~~cL~~l~~W~p~~~i~~vl~~i~~ll 121 (138)
T 1jat_B 89 PTTGEVQTDFHTLRDWKRAYTMETLLLDLRKEM 121 (138)
T ss_dssp TTTCBBCTTSHHHHTCCTTCCHHHHHHHHHHHH
T ss_pred CCCCEEeeecccCCCCCCcCcHHHHHHHHHHHH
Confidence 1 11 17999889988887776666
No 38
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=95.03 E-value=0.098 Score=42.27 Aligned_cols=85 Identities=21% Similarity=0.353 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHhccce-----eeee-----cCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC---
Q 027371 15 FSRSVYSEIEEVGWEH-----LVRL-----SEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY--- 76 (224)
Q Consensus 15 fys~li~Eie~iGW~k-----l~~i-----d~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~--- 76 (224)
--++|.+|+.++.-+. +.-. +.++...+..+... .|....++|.+|.+||.+||.|...=|.
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 4589999999985332 1111 24577777777643 2688899999999999999999765442
Q ss_pred -----------ceec--ccCccCcHHHHHHHHHHHH
Q 027371 77 -----------IFNL--KWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -----------~f~~--~W~~~ssL~~v~~qF~~~L 99 (224)
.+.- .|++..+|..|+...+..|
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll 123 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 123 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHH
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHH
Confidence 1111 5999989988877766654
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=95.00 E-value=0.22 Score=41.47 Aligned_cols=92 Identities=16% Similarity=0.201 Sum_probs=64.7
Q ss_pred ccCCCchhHHHHHHHHHHhccc---eee----eecCCcc---eEEEEEEeCC----CCEEEEEEEecCCCCCCCCceeec
Q 027371 8 ESANSSSFSRSVYSEIEEVGWE---HLV----RLSEDLK---FLSFRVIDKK----GRVHCMEIQLDKNYPRSPPSISAD 73 (224)
Q Consensus 8 ~~~~~~~fys~li~Eie~iGW~---kl~----~id~~ls---~i~l~~~D~~----gR~H~l~v~l~~~yP~~~P~~~~d 73 (224)
.....+.--.+|.+|+.++.=. .+. -.+.|+. ...+.+.... |....++|.+|.+||.+||.|...
T Consensus 23 ~~~~~s~a~~RL~kEl~~l~~~~~i~~~~~~~p~~~nl~~~~~w~~~I~p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 102 (190)
T 3o2u_A 23 IQPNLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCL 102 (190)
T ss_dssp SSCCCCHHHHHHHHHHHTCCCCTTEEEEEEECTTCCCTTSCCEEEEEECCSSSTTTTCCEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCccHHHHHHHHHHHhccCCCCEEEEecCCCCCccCCcCCeEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCceeEEe
Confidence 3445566689999999998511 111 1245677 7777776432 688899999999999999998765
Q ss_pred CCC--------------ceecccCccCcHHHHHHHHHHHH
Q 027371 74 VPY--------------IFNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 74 lP~--------------~f~~~W~~~ssL~~v~~qF~~~L 99 (224)
-|. .+.-.|+|..++..|+...+..|
T Consensus 103 t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 142 (190)
T 3o2u_A 103 KKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLF 142 (190)
T ss_dssp SCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred cCcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHH
Confidence 442 01126999999988877766555
No 40
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=94.93 E-value=0.3 Score=40.30 Aligned_cols=86 Identities=19% Similarity=0.339 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHhcccee----ee-e-cCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC------
Q 027371 14 SFSRSVYSEIEEVGWEHL----VR-L-SEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY------ 76 (224)
Q Consensus 14 ~fys~li~Eie~iGW~kl----~~-i-d~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~------ 76 (224)
.-.++|.+|+.++.=+.. +. . +.++...++.+... .|....++|.+|.+||.+||.|...=|.
T Consensus 7 ~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 86 (183)
T 3rz3_A 7 SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIY 86 (183)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCC
Confidence 446899999999853311 22 2 35788999988743 2688899999999999999998755442
Q ss_pred --------cee-------------cccCccCcHHHHHHHHHHHH
Q 027371 77 --------IFN-------------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 --------~f~-------------~~W~~~ssL~~v~~qF~~~L 99 (224)
.+. -.|+|..++..|+...+..|
T Consensus 87 ~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll 130 (183)
T 3rz3_A 87 ETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLL 130 (183)
T ss_dssp TTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHH
T ss_pred CCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHH
Confidence 111 35999888988887777665
No 41
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=94.86 E-value=0.24 Score=43.33 Aligned_cols=86 Identities=20% Similarity=0.308 Sum_probs=63.4
Q ss_pred hhHHHHHHHHHHhccc--------eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC----
Q 027371 14 SFSRSVYSEIEEVGWE--------HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY---- 76 (224)
Q Consensus 14 ~fys~li~Eie~iGW~--------kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~---- 76 (224)
.-.++|.+|+.+|.-+ .+.-.+.++......+... .|....++|.+|.+||.+||.|...=|.
T Consensus 57 ~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 136 (253)
T 3e46_A 57 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 136 (253)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCC
Confidence 3478999999998432 2344567899999998833 2788999999999999999998754431
Q ss_pred c------e-----ecccCccCcHHHHHHHHHHHH
Q 027371 77 I------F-----NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ~------f-----~~~W~~~ssL~~v~~qF~~~L 99 (224)
. + .-.|+|..+|..|+...+..|
T Consensus 137 V~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll 170 (253)
T 3e46_A 137 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALL 170 (253)
T ss_dssp BCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHH
T ss_pred ccCCCCeeecccccCCCCCCCCHHHHHHHHHHHh
Confidence 0 1 127999999988877666555
No 42
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=94.76 E-value=0.21 Score=40.36 Aligned_cols=92 Identities=16% Similarity=0.280 Sum_probs=63.5
Q ss_pred ccCCCchhHHHHHHHHHHhccce----eee-e-cCCcceEEEEEEeC----CCCEEEEEEEecCCCCCCCCceeecCCC-
Q 027371 8 ESANSSSFSRSVYSEIEEVGWEH----LVR-L-SEDLKFLSFRVIDK----KGRVHCMEIQLDKNYPRSPPSISADVPY- 76 (224)
Q Consensus 8 ~~~~~~~fys~li~Eie~iGW~k----l~~-i-d~~ls~i~l~~~D~----~gR~H~l~v~l~~~yP~~~P~~~~dlP~- 76 (224)
.....+.--.+|.+|+.++.-+. -+. . +.++....+.+-.. .|....++|.++.+||.+||.|...=|.
T Consensus 8 ~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 87 (167)
T 3fn1_B 8 STRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIW 87 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEECCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCC
T ss_pred CccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEECCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcc
Confidence 34455667889999999986441 122 2 34577777776322 2678889999999999999998755441
Q ss_pred -------------ceec------ccCccCcHHHHHHHHHHHH
Q 027371 77 -------------IFNL------KWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -------------~f~~------~W~~~ssL~~v~~qF~~~L 99 (224)
.+.- .|++..++..|+...+..|
T Consensus 88 HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll 129 (167)
T 3fn1_B 88 HPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLF 129 (167)
T ss_dssp CSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTT
T ss_pred cCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHH
Confidence 0111 5999989988876666554
No 43
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=94.71 E-value=0.32 Score=40.69 Aligned_cols=86 Identities=15% Similarity=0.255 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHhcccee------------------eeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCce
Q 027371 14 SFSRSVYSEIEEVGWEHL------------------VRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSI 70 (224)
Q Consensus 14 ~fys~li~Eie~iGW~kl------------------~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~ 70 (224)
.-.++|.+|+.++.=+.. .-.+.++...+..+.... |....++|.+|.+||.+||.|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 346899999998854321 224566888888887432 688999999999999999998
Q ss_pred eecCCC----c------e-----ecccCccCcHHHHHHHHHHHH
Q 027371 71 SADVPY----I------F-----NLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 71 ~~dlP~----~------f-----~~~W~~~ssL~~v~~qF~~~L 99 (224)
...=|. . + .-.|+|..+|..|+...+..|
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll 155 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAML 155 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHH
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHH
Confidence 754431 1 0 115999999988877766655
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=94.62 E-value=0.42 Score=38.92 Aligned_cols=84 Identities=23% Similarity=0.362 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhccc-----eeeee-cC-C--cceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC-----
Q 027371 16 SRSVYSEIEEVGWE-----HLVRL-SE-D--LKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY----- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~i-d~-~--ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~----- 76 (224)
-.+|++|+.++.-+ ..+.. +. + +...+..+.... |....++|.++.+||.+||.+...=|.
T Consensus 27 ~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV 106 (160)
T 2a4d_A 27 NFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGV 106 (160)
T ss_dssp HHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTB
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCE
Confidence 47999999998643 12233 43 3 788888887432 688999999999999999988754331
Q ss_pred -----c-----ee--cccCccCcHHHHHHHHHHHH
Q 027371 77 -----I-----FN--LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -----~-----f~--~~W~~~ssL~~v~~qF~~~L 99 (224)
. +. -.|++..++..|+...+..|
T Consensus 107 ~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll 141 (160)
T 2a4d_A 107 NSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLM 141 (160)
T ss_dssp CTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHH
T ss_pred ECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHH
Confidence 0 11 26999889988877766655
No 45
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=94.47 E-value=0.39 Score=39.65 Aligned_cols=90 Identities=13% Similarity=0.298 Sum_probs=63.0
Q ss_pred cCCCchhHHHHHHHHHHhccc--eeee--ecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC---
Q 027371 9 SANSSSFSRSVYSEIEEVGWE--HLVR--LSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY--- 76 (224)
Q Consensus 9 ~~~~~~fys~li~Eie~iGW~--kl~~--id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~--- 76 (224)
....+.--.+|.+|+.++.=. .-+. .+.++....+.+ ... |....++|.+|.+||.+||.|...=|.
T Consensus 21 ~~~~~~~~~RL~kEl~~l~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HP 99 (180)
T 2nvu_C 21 SKKASAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 99 (180)
T ss_dssp CCSCCHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred cCCccHHHHHHHHHHHhcCCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccC
Confidence 344566789999999998311 1122 246688888776 322 677889999999999999998765442
Q ss_pred -----------ceecccCccCcHHHHHHHHHHHH
Q 027371 77 -----------IFNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -----------~f~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+.-.|+|..++..|+...+..|
T Consensus 100 NV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll 133 (180)
T 2nvu_C 100 NIDLEGNVALNILREDWKPVLTINSIIYGLQYLF 133 (180)
T ss_dssp TBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHH
T ss_pred CCCCCCcEEcccccccCCCCCCHHHHHHHHHHHH
Confidence 01126999889988887776655
No 46
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=94.35 E-value=0.35 Score=43.83 Aligned_cols=90 Identities=19% Similarity=0.329 Sum_probs=64.9
Q ss_pred CCCchhHHHHHHHHHHhccce---------eeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCC
Q 027371 10 ANSSSFSRSVYSEIEEVGWEH---------LVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVP 75 (224)
Q Consensus 10 ~~~~~fys~li~Eie~iGW~k---------l~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP 75 (224)
..++.-..+|.+|+..+.=+. +.-.+.++...++.+.... |....++|.+|.+||.+||.|...=|
T Consensus 72 ~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~ 151 (323)
T 3ceg_A 72 ANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETT 151 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCS
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEecc
Confidence 355677899999999985331 1223567888888887533 68899999999999999999986544
Q ss_pred C----cee----------------------cccCccC-cHHHHHHHHHHHH
Q 027371 76 Y----IFN----------------------LKWSRKS-RLKDLLQQFREHL 99 (224)
Q Consensus 76 ~----~f~----------------------~~W~~~s-sL~~v~~qF~~~L 99 (224)
. .|. -.|+|.. +|..|+...+..|
T Consensus 152 ~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL 202 (323)
T 3ceg_A 152 GGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLI 202 (323)
T ss_dssp TTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHT
T ss_pred CCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHH
Confidence 1 111 1598875 7888877766655
No 47
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=94.28 E-value=0.22 Score=39.88 Aligned_cols=79 Identities=15% Similarity=0.282 Sum_probs=55.4
Q ss_pred HHHHHHHHHh---ccceeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC----c------e
Q 027371 17 RSVYSEIEEV---GWEHLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY----I------F 78 (224)
Q Consensus 17 s~li~Eie~i---GW~kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~----~------f 78 (224)
++|.+|+.++ |. .+.-.+.++...++.+... .|....++|.+|.+||.+||.+...=|. . +
T Consensus 5 ~Rl~kEl~~l~~~~~-~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~i 83 (152)
T 2onu_A 5 TRKQCDFTKLIMAGY-DLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSV 83 (152)
T ss_dssp CHHHHTHHHHHHHTC-CEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBB
T ss_pred HHHHHHHHhcCcCCC-EEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeE
Confidence 4677777666 33 2334567788888888632 2788999999999999999998754331 0 0
Q ss_pred e-----cccCccCcHHHHHHHHH
Q 027371 79 N-----LKWSRKSRLKDLLQQFR 96 (224)
Q Consensus 79 ~-----~~W~~~ssL~~v~~qF~ 96 (224)
. -.|+|..++..|+..+.
T Consensus 84 Cl~il~~~W~p~~~i~~vl~~ii 106 (152)
T 2onu_A 84 CLDVINQTWTPLYSLVNVFEVFL 106 (152)
T ss_dssp CHHHHHHHCCTTCCHHHHHHTHH
T ss_pred ecccccccCCCCCCHHHHHHHHH
Confidence 0 15998888888887653
No 48
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=93.94 E-value=0.68 Score=37.72 Aligned_cols=84 Identities=15% Similarity=0.163 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhcc---------------ceeee--ecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeec
Q 027371 16 SRSVYSEIEEVGW---------------EHLVR--LSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISAD 73 (224)
Q Consensus 16 ys~li~Eie~iGW---------------~kl~~--id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~d 73 (224)
-.+|.+|+.++.= -..+. -+.++...+..+.... |....++|.+|.+||.+||.|...
T Consensus 8 ~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 87 (172)
T 2y9m_A 8 MSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFM 87 (172)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred HHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEe
Confidence 4678888777642 22222 2457888988887433 788999999999999999998765
Q ss_pred C-----CCc-----------ee-cccCccCcHHHHHHHHHHHH
Q 027371 74 V-----PYI-----------FN-LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 74 l-----P~~-----------f~-~~W~~~ssL~~v~~qF~~~L 99 (224)
= |-. +. -.|+|..+|..|+...+..|
T Consensus 88 t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll 130 (172)
T 2y9m_A 88 QNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLL 130 (172)
T ss_dssp TTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHH
T ss_pred eCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHH
Confidence 5 211 11 26999889988887776655
No 49
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=93.86 E-value=0.28 Score=40.63 Aligned_cols=86 Identities=20% Similarity=0.290 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHhccc-eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCC----Ccee----
Q 027371 14 SFSRSVYSEIEEVGWE-HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVP----YIFN---- 79 (224)
Q Consensus 14 ~fys~li~Eie~iGW~-kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP----~~f~---- 79 (224)
.--.+|.+|+.++.=+ .-+....++....+.+... .|....++|.+|.+||.+||.+...=| -...
T Consensus 25 ~a~~RL~kEl~~l~~~g~~v~~~ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ 104 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGT 104 (179)
T ss_dssp HHHHHHHHHHHHHHHSSSCEEEEEETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred HHHHHHHHHHHhcCcCCCEEEECCCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCe
Confidence 3567999999987311 1122234677777777642 278899999999999999999875443 1111
Q ss_pred -------cccCccCcHHHHHHHHHHHH
Q 027371 80 -------LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 80 -------~~W~~~ssL~~v~~qF~~~L 99 (224)
-.|+|..++..|+..|...|
T Consensus 105 ICL~iL~~~WsP~~ti~~iL~s~I~~L 131 (179)
T 2z5d_A 105 VCLDVINQTWTALYDLTNIFESFLPQL 131 (179)
T ss_dssp BCHHHHHHHCCTTCCTTHHHHTHHHHH
T ss_pred EeccccccCCCCCCCHHHHHHHHHHHH
Confidence 15988888888887744433
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=93.13 E-value=0.57 Score=38.34 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhccce-eeeecCCcceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC----c------ee
Q 027371 16 SRSVYSEIEEVGWEH-LVRLSEDLKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY----I------FN 79 (224)
Q Consensus 16 ys~li~Eie~iGW~k-l~~id~~ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~----~------f~ 79 (224)
-.+|.+|+..+.-+. -+..+.++....+.+.... |....++|.++.+||.+||.|...=+. . +.
T Consensus 14 ~~RL~~El~~l~~~~~~v~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iC 93 (171)
T 1yf9_A 14 NRRREMDYMRLCNSTRKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVC 93 (171)
T ss_dssp CHHHHHHHHHHHSSSSCEEECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEe
Confidence 378999999876431 1245788999999887432 788999999999999999998754331 0 10
Q ss_pred -----cccCccCcHHHHHHHH
Q 027371 80 -----LKWSRKSRLKDLLQQF 95 (224)
Q Consensus 80 -----~~W~~~ssL~~v~~qF 95 (224)
-.|++..++..|+..+
T Consensus 94 l~iL~~~W~p~~~i~~vL~si 114 (171)
T 1yf9_A 94 LDVINQTWTPMYQLENIFDVF 114 (171)
T ss_dssp HHHHHHHCCTTCCTHHHHHTH
T ss_pred ccccccCCCCCCcHHHHHHHH
Confidence 1688888888887765
No 51
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=93.13 E-value=0.21 Score=42.51 Aligned_cols=83 Identities=27% Similarity=0.418 Sum_probs=56.5
Q ss_pred HHHHHHHHHhccce-----eeeecC-CcceEEEEEEe---CC--CCEEEEEEEecCCCCCCCCceeecCCC---------
Q 027371 17 RSVYSEIEEVGWEH-----LVRLSE-DLKFLSFRVID---KK--GRVHCMEIQLDKNYPRSPPSISADVPY--------- 76 (224)
Q Consensus 17 s~li~Eie~iGW~k-----l~~id~-~ls~i~l~~~D---~~--gR~H~l~v~l~~~yP~~~P~~~~dlP~--------- 76 (224)
.+|.+|+.++.-+. +.-.+. ++...+..+.. +- |....++|.+|.+||.+||.|...=|.
T Consensus 5 ~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~ 84 (215)
T 1tte_A 5 KRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVT 84 (215)
T ss_dssp HHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCC
Confidence 68999999985331 222233 46677766543 21 567789999999999999998754431
Q ss_pred ------ceecccCccCcHHHHHHHHHHHH
Q 027371 77 ------IFNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ------~f~~~W~~~ssL~~v~~qF~~~L 99 (224)
.+.-.|+|..++..|+...+..|
T Consensus 85 G~ICL~iL~~~WsP~~ti~~VL~sI~sLL 113 (215)
T 1tte_A 85 GAICLDILRNAWSPVITLKSALISLQALL 113 (215)
T ss_dssp SCCCSSTTTCCSCTTCCHHHHHHHHHHHH
T ss_pred CEEECccCCCCCCCcCcHHHHHHHHHHHH
Confidence 01116999989988877766655
No 52
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=93.13 E-value=0.74 Score=37.68 Aligned_cols=85 Identities=21% Similarity=0.322 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHhccc-----eeeee-cCC---cceEEEEEEeCC-----CCEEEEEEEecCCCCCCCCceeecCCC----
Q 027371 15 FSRSVYSEIEEVGWE-----HLVRL-SED---LKFLSFRVIDKK-----GRVHCMEIQLDKNYPRSPPSISADVPY---- 76 (224)
Q Consensus 15 fys~li~Eie~iGW~-----kl~~i-d~~---ls~i~l~~~D~~-----gR~H~l~v~l~~~yP~~~P~~~~dlP~---- 76 (224)
--.+|.+|+.++.-+ ..+.. +.+ +...+..+.... |....++|.++.+||.+||.+...=|.
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 358999999988532 11232 433 788888887432 678899999999999999988654331
Q ss_pred -----------cee--cccCccCcHHHHHHHHHHHH
Q 027371 77 -----------IFN--LKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 -----------~f~--~~W~~~ssL~~v~~qF~~~L 99 (224)
.+. -.|++..++..|+...+..|
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll 151 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLM 151 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHH
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHH
Confidence 011 26999889988887766665
No 53
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=92.82 E-value=0.69 Score=42.51 Aligned_cols=84 Identities=15% Similarity=0.362 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhccc-----eeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceeecCCC---------
Q 027371 16 SRSVYSEIEEVGWE-----HLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISADVPY--------- 76 (224)
Q Consensus 16 ys~li~Eie~iGW~-----kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~dlP~--------- 76 (224)
-++|.+|+.++.-+ .+.-.+.|+...+..+... .|....++|.+|.+||.+||.|...=|.
T Consensus 5 ~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G 84 (399)
T 4ddg_A 5 LKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 84 (399)
T ss_dssp HHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCC
Confidence 47899999998533 1223466788888888743 2688899999999999999998755442
Q ss_pred c-----eecccCccCcHHHHHHHHHHHH
Q 027371 77 I-----FNLKWSRKSRLKDLLQQFREHL 99 (224)
Q Consensus 77 ~-----f~~~W~~~ssL~~v~~qF~~~L 99 (224)
. +.-.|+|..++..|+...+..|
T Consensus 85 ~iCl~il~~~W~p~~~i~~vL~~i~~ll 112 (399)
T 4ddg_A 85 SISLDILRSQWSPALTISKVLLSICSLL 112 (399)
T ss_dssp BBCCGGGTTSCCTTCCHHHHHHHHHHHH
T ss_pred eEeCcccccCCCccccHHHHHHHHHHHH
Confidence 0 1127999989988876666555
No 54
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=87.65 E-value=1.9 Score=34.72 Aligned_cols=52 Identities=21% Similarity=0.294 Sum_probs=37.1
Q ss_pred CCCEEE--EEEEecCCCCCCCCceeecC-------CCce-------e----cccCc-cCcHHHHHHHHHHHHH
Q 027371 49 KGRVHC--MEIQLDKNYPRSPPSISADV-------PYIF-------N----LKWSR-KSRLKDLLQQFREHLE 100 (224)
Q Consensus 49 ~gR~H~--l~v~l~~~yP~~~P~~~~dl-------P~~f-------~----~~W~~-~ssL~~v~~qF~~~Le 100 (224)
+|..+. |.|-++.+||.+||.|.+.- +.+. . -+|++ .++|.++++..+.++.
T Consensus 65 ~g~~y~iPi~Iwlp~~YP~~pP~vfv~pt~~m~I~~~~~Vd~~G~i~lpyL~~W~~~~snL~~ll~~l~~~F~ 137 (146)
T 3obq_A 65 RGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFG 137 (146)
T ss_dssp SSCEEEEEEEEECCTTTTTSCCEEEECCCTTEEECCBTTBCTTCBBCCHHHHTCCTTTCCHHHHHHHHHHHHH
T ss_pred cCccccceEEEEeCccCCCCCCEEEEeCCCCCEECCCCCCCCCCCEecccccccCCCCCCHHHHHHHHHHHHh
Confidence 355555 69999999999999998754 2111 0 17986 7889888877776654
No 55
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=87.18 E-value=7.6 Score=29.49 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=39.9
Q ss_pred CCCchhHHHHHHHHHHhc---cceeeeecCC-------cceEEEEEEe--CCC----CEEEEEEEecCCCCCCCCceee
Q 027371 10 ANSSSFSRSVYSEIEEVG---WEHLVRLSED-------LKFLSFRVID--KKG----RVHCMEIQLDKNYPRSPPSISA 72 (224)
Q Consensus 10 ~~~~~fys~li~Eie~iG---W~kl~~id~~-------ls~i~l~~~D--~~g----R~H~l~v~l~~~yP~~~P~~~~ 72 (224)
.+...+-.....||++|. =+.+..++.. -..+++++.- ..+ -.-.|.|.+|.+||.++|.+..
T Consensus 6 ~~~~~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l 84 (137)
T 1ukx_A 6 SGMESYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDL 84 (137)
T ss_dssp CCCCCHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEE
T ss_pred CCCcchHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEecCCcCCcccceEEEEEEECCCCCCCCCCcEEE
Confidence 344577778888997774 2444445532 2456666652 111 2345788889999999998764
No 56
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.09 E-value=4.2 Score=30.80 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHhc--c-c--eeeeec---CCcceEEEEEEeCC----CCEEEEEEEecCCCCCCCCceeec
Q 027371 14 SFSRSVYSEIEEVG--W-E--HLVRLS---EDLKFLSFRVIDKK----GRVHCMEIQLDKNYPRSPPSISAD 73 (224)
Q Consensus 14 ~fys~li~Eie~iG--W-~--kl~~id---~~ls~i~l~~~D~~----gR~H~l~v~l~~~yP~~~P~~~~d 73 (224)
.+......||++|. . + .+..++ .+...+++++.... .-.-.|.|.+|.+||.++|.+...
T Consensus 7 ~~~e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 7 GMAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CSCHHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred hHHHHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 34455677887763 1 2 333333 22346777765332 234568899999999999987754
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.66 E-value=3.2 Score=31.36 Aligned_cols=59 Identities=15% Similarity=0.289 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHHhc---cceeeeecCCcceEEEEEEeC-----CCCEEEEEEEecCCCCCCCCceee
Q 027371 14 SFSRSVYSEIEEVG---WEHLVRLSEDLKFLSFRVIDK-----KGRVHCMEIQLDKNYPRSPPSISA 72 (224)
Q Consensus 14 ~fys~li~Eie~iG---W~kl~~id~~ls~i~l~~~D~-----~gR~H~l~v~l~~~yP~~~P~~~~ 72 (224)
.+-.....||++|. =+.+..++..-..+++++... ..-.-.|.|.+|.+||.++|.+..
T Consensus 10 ~~~e~q~~EleaL~sIy~d~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l 76 (128)
T 2ebm_A 10 DYGEEQRNELEALESIYPDSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEI 76 (128)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEECCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEE
T ss_pred ChHHHHHHHHHHHHHHccCceEEccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEE
Confidence 46677788987774 245555555446667776532 123456899999999999998764
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=80.78 E-value=9.2 Score=29.17 Aligned_cols=60 Identities=12% Similarity=0.261 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHhc---cceeeeecC--------CcceEEEEEEeCC----CCEEEEEEEecCCCCCCCCceeec
Q 027371 14 SFSRSVYSEIEEVG---WEHLVRLSE--------DLKFLSFRVIDKK----GRVHCMEIQLDKNYPRSPPSISAD 73 (224)
Q Consensus 14 ~fys~li~Eie~iG---W~kl~~id~--------~ls~i~l~~~D~~----gR~H~l~v~l~~~yP~~~P~~~~d 73 (224)
.|-..-..||++|. =+.+..++. .-..+++++.... .-.-.|.|.+|.+||.++|.+...
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 84 (138)
T 2yz0_A 10 QYYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDKEPVESSITLHFAMTPMYPYTAPEIEFK 84 (138)
T ss_dssp HHHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSCSSCCCEEEEEEECCSSTTSSCCEEEEE
T ss_pred chHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCCCCCceEEEEEEECCCCCCCCCCeEEEe
Confidence 44555677887664 234444543 2356677766322 234468888999999999988753
No 59
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=73.79 E-value=5.8 Score=31.42 Aligned_cols=24 Identities=8% Similarity=0.188 Sum_probs=20.5
Q ss_pred EEEEEEEecCCCCCCCCceeecCC
Q 027371 52 VHCMEIQLDKNYPRSPPSISADVP 75 (224)
Q Consensus 52 ~H~l~v~l~~~yP~~~P~~~~dlP 75 (224)
.-.|.|.+|.+||.++|.+.+.-+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 578999999999999998886654
No 60
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=73.71 E-value=14 Score=27.75 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=34.3
Q ss_pred HHHHHHHHhc---cceeeeecC----CcceEEEEEEeC----C---CCEEEEEEEecCCCCCCCCceeec
Q 027371 18 SVYSEIEEVG---WEHLVRLSE----DLKFLSFRVIDK----K---GRVHCMEIQLDKNYPRSPPSISAD 73 (224)
Q Consensus 18 ~li~Eie~iG---W~kl~~id~----~ls~i~l~~~D~----~---gR~H~l~v~l~~~yP~~~P~~~~d 73 (224)
....||++|. =+.+..++. .-..+++++.-. . .-.-.|.|.+|.+||.++|.+...
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~ 81 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIR 81 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEE
Confidence 3556776653 244444542 345677777411 1 123457899999999999887643
No 61
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=73.09 E-value=4 Score=33.30 Aligned_cols=47 Identities=21% Similarity=0.310 Sum_probs=34.9
Q ss_pred EEEEEEecCCCCCCCCceeecCC----------Cc--eec------------ccCc-cCcHHHHHHHHHHHH
Q 027371 53 HCMEIQLDKNYPRSPPSISADVP----------YI--FNL------------KWSR-KSRLKDLLQQFREHL 99 (224)
Q Consensus 53 H~l~v~l~~~yP~~~P~~~~dlP----------~~--f~~------------~W~~-~ssL~~v~~qF~~~L 99 (224)
.-|.|.++.+||.+||.|.+.-+ .. -.+ +|++ .++|.++++..+..+
T Consensus 83 ~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL~~W~p~~s~L~~ll~~l~~lf 154 (162)
T 3r3q_A 83 IPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILHAWDPAAMNLIMVVQELMSLL 154 (162)
T ss_dssp EEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGGGSCCGGGCCHHHHHHHHHHTT
T ss_pred ccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCcccccCCCCcCcHHHHHHHHHHHh
Confidence 66999999999999999988541 10 011 8998 579998887766654
No 62
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=70.59 E-value=4.3 Score=33.73 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=19.1
Q ss_pred EEEEEEEecCCCCCCCCceee
Q 027371 52 VHCMEIQLDKNYPRSPPSISA 72 (224)
Q Consensus 52 ~H~l~v~l~~~yP~~~P~~~~ 72 (224)
...|++.+|.+||..||.|..
T Consensus 84 ~F~L~~~fPe~YP~~PPeV~F 104 (172)
T 2z6o_A 84 EFDIEFDIPITYPTTAPEIAV 104 (172)
T ss_dssp EEEEEEECCTTTTTSCCCCBC
T ss_pred EEEEEEECCCCCCCCCCeeee
Confidence 778999999999999999974
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=62.96 E-value=13 Score=29.01 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=19.0
Q ss_pred EEEEEEEecCCCCCCCCceeecCC
Q 027371 52 VHCMEIQLDKNYPRSPPSISADVP 75 (224)
Q Consensus 52 ~H~l~v~l~~~yP~~~P~~~~dlP 75 (224)
.-.|.|.+|.+||.++|.+.+.-+
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 456788999999999998875544
No 64
>3ipj_A PTS system, iiabc component; iiabc component,PSI, structural genomics, MCSG, structure initiative; 1.20A {Clostridium difficile}
Probab=40.62 E-value=22 Score=26.34 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=27.7
Q ss_pred HHHHHHH-HHHhccceeeeecCCcceEEEEEEeCC
Q 027371 16 SRSVYSE-IEEVGWEHLVRLSEDLKFLSFRVIDKK 49 (224)
Q Consensus 16 ys~li~E-ie~iGW~kl~~id~~ls~i~l~~~D~~ 49 (224)
|..+.++ |+.||.+++.+++...+.|+|++.|.+
T Consensus 6 y~~~A~~Ii~~lG~eNI~~v~~C~TRLR~~lkD~~ 40 (95)
T 3ipj_A 6 YNKIANELIKIIGEDNIISITHCATRLRVMVKDRE 40 (95)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSEEEEEESCGG
T ss_pred HHHHHHHHHHHHCHHHhhhhhhccceeEEEEeCcc
Confidence 5555444 455699999999999999999999984
No 65
>4f98_A Hypothetical protein; PF10976 family protein, DUF2790, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.26A {Pseudomonas aeruginosa}
Probab=28.45 E-value=82 Score=22.25 Aligned_cols=32 Identities=9% Similarity=0.149 Sum_probs=25.6
Q ss_pred eeeeecCC-----cceEEEEEEeCCCCEEEEEEEecC
Q 027371 30 HLVRLSED-----LKFLSFRVIDKKGRVHCMEIQLDK 61 (224)
Q Consensus 30 kl~~id~~-----ls~i~l~~~D~~gR~H~l~v~l~~ 61 (224)
|+++++.. +-...++-+|++|+.|.|+-....
T Consensus 27 kVis~t~~~~~C~Vvpa~MtY~DS~G~~~~l~Y~~~g 63 (69)
T 4f98_A 27 NVLHRTDNSTRTGVVPVTVVYEDHSGELHKIRFLEWG 63 (69)
T ss_dssp EEEEECCCTTCCSEEEEEEEEECTTSCEEEEEEEEEC
T ss_pred eEEEecCCCCccceEccEEEEEcCCCCEEEEEEEeec
Confidence 78888855 446788999999999999877644
No 66
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=27.38 E-value=38 Score=27.85 Aligned_cols=21 Identities=29% Similarity=0.640 Sum_probs=18.3
Q ss_pred EEEEEEEecCCCCCCCCceee
Q 027371 52 VHCMEIQLDKNYPRSPPSISA 72 (224)
Q Consensus 52 ~H~l~v~l~~~yP~~~P~~~~ 72 (224)
+--|++.+|.+||..||.|..
T Consensus 86 eFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 86 EFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp EEEEEEECCTTTTTSCCCCBC
T ss_pred EEEEEEeCCccCCCCCCEeec
Confidence 556899999999999999973
No 67
>3bp3_A Glucose-specific phosphotransferase enzyme IIB component; transcription regulation, inner membrane, kinase, membrane, phosphoprotein; 1.65A {Escherichia coli} PDB: 1o2f_B 3bp8_C
Probab=24.80 E-value=36 Score=24.32 Aligned_cols=27 Identities=22% Similarity=0.305 Sum_probs=24.5
Q ss_pred HHHhc-cceeeeecCCcceEEEEEEeCC
Q 027371 23 IEEVG-WEHLVRLSEDLKFLSFRVIDKK 49 (224)
Q Consensus 23 ie~iG-W~kl~~id~~ls~i~l~~~D~~ 49 (224)
|+.+| .+++.+++...+.++|++.|.+
T Consensus 11 i~~lGG~~NI~~v~~C~TRLR~~lkD~~ 38 (82)
T 3bp3_A 11 VAAFGGKENITNLDACITRLRVSVADVS 38 (82)
T ss_dssp HHHTTCGGGEEEEEECSSEEEEEESCGG
T ss_pred HHHhCCHHHHhhhccccceEEEEEeCcc
Confidence 57787 8999999999999999999985
Done!