Query 027372
Match_columns 224
No_of_seqs 291 out of 1937
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 14:47:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pny_A Isopentenyl-diphosphate 100.0 1.6E-37 5.6E-42 271.4 15.4 155 68-224 18-172 (246)
2 2dho_A Isopentenyl-diphosphate 100.0 1.8E-37 6.2E-42 268.9 12.4 154 69-224 8-161 (235)
3 3dup_A MUTT/nudix family prote 99.9 9.8E-27 3.4E-31 209.9 12.8 120 87-224 88-211 (300)
4 1hzt_A Isopentenyl diphosphate 99.9 1.6E-25 5.5E-30 183.8 9.6 121 86-224 1-121 (190)
5 2fkb_A Putative nudix hydrolas 99.9 4.9E-23 1.7E-27 166.3 14.3 108 81-208 2-109 (180)
6 1q27_A Putative nudix hydrolas 99.8 4.9E-21 1.7E-25 153.4 10.8 98 87-206 5-106 (171)
7 3oga_A Nucleoside triphosphata 99.7 6.7E-16 2.3E-20 122.7 10.8 66 118-193 23-88 (165)
8 1sjy_A MUTT/nudix family prote 99.6 5.6E-15 1.9E-19 115.6 10.5 77 118-209 9-87 (159)
9 3grn_A MUTT related protein; s 99.6 1.1E-14 3.7E-19 114.4 11.4 76 119-209 5-80 (153)
10 3r03_A Nudix hydrolase; struct 99.5 3.6E-14 1.2E-18 109.4 10.2 65 119-194 5-69 (144)
11 1rya_A GDP-mannose mannosyl hy 99.5 5.2E-14 1.8E-18 110.2 11.2 75 121-210 17-91 (160)
12 3eds_A MUTT/nudix family prote 99.5 2.9E-14 1E-18 112.6 9.2 63 115-193 14-76 (153)
13 1f3y_A Diadenosine 5',5'''-P1, 99.5 1.4E-14 4.8E-19 113.5 5.5 61 118-192 10-70 (165)
14 3hhj_A Mutator MUTT protein; n 99.5 1.1E-13 3.8E-18 109.1 10.1 65 119-194 26-90 (158)
15 3exq_A Nudix family hydrolase; 99.5 1.7E-13 5.8E-18 109.3 11.1 77 118-211 6-83 (161)
16 3i7u_A AP4A hydrolase; nudix p 99.5 1.1E-13 3.7E-18 108.6 9.3 72 122-215 4-75 (134)
17 3gwy_A Putative CTP pyrophosph 99.5 9.7E-14 3.3E-18 107.4 9.0 71 123-209 7-78 (140)
18 2kdv_A RNA pyrophosphohydrolas 99.5 2.5E-13 8.6E-18 109.4 10.6 60 119-193 5-64 (164)
19 4dyw_A MUTT/nudix family prote 99.5 3.5E-13 1.2E-17 107.1 11.1 73 119-209 26-98 (157)
20 2rrk_A ORF135, CTP pyrophospho 99.5 2.1E-13 7.2E-18 104.3 9.0 73 121-209 7-79 (140)
21 2pbt_A AP4A hydrolase; nudix p 99.5 2.6E-13 8.8E-18 103.1 9.3 70 122-213 4-73 (134)
22 1ktg_A Diadenosine tetraphosph 99.5 2.4E-13 8.3E-18 103.9 9.1 60 121-194 2-64 (138)
23 3u53_A BIS(5'-nucleosyl)-tetra 99.5 2.1E-13 7.2E-18 107.9 9.0 49 131-193 21-69 (155)
24 3q93_A 7,8-dihydro-8-oxoguanin 99.4 4.4E-13 1.5E-17 109.2 10.6 74 121-211 23-96 (176)
25 3ees_A Probable pyrophosphohyd 99.4 3.6E-13 1.2E-17 104.2 9.5 62 122-194 21-82 (153)
26 2pqv_A MUTT/nudix family prote 99.4 5.8E-13 2E-17 104.3 9.4 57 119-193 16-72 (154)
27 1vcd_A NDX1; nudix protein, di 99.4 9.6E-13 3.3E-17 99.1 10.2 66 123-209 3-68 (126)
28 2o1c_A DATP pyrophosphohydrola 99.4 3.4E-13 1.2E-17 103.7 7.8 57 123-193 10-67 (150)
29 3gg6_A Nudix motif 18, nucleos 99.4 3.4E-13 1.2E-17 105.8 7.7 63 119-193 17-79 (156)
30 2b06_A MUTT/nudix family prote 99.4 6.3E-13 2.2E-17 104.0 9.2 72 119-209 5-80 (155)
31 1nqz_A COA pyrophosphatase (MU 99.4 3.5E-13 1.2E-17 110.2 7.5 64 119-193 32-97 (194)
32 3shd_A Phosphatase NUDJ; nudix 99.4 7.5E-13 2.6E-17 103.3 9.1 70 122-210 5-74 (153)
33 2b0v_A Nudix hydrolase; struct 99.4 1.3E-12 4.3E-17 101.6 9.7 71 123-211 9-79 (153)
34 2azw_A MUTT/nudix family prote 99.4 7.4E-13 2.5E-17 102.1 8.2 58 120-193 16-74 (148)
35 3i9x_A MUTT/nudix family prote 99.4 1.3E-12 4.5E-17 106.7 8.9 74 119-207 24-109 (187)
36 3f6a_A Hydrolase, nudix family 99.4 8.2E-13 2.8E-17 104.4 7.1 59 120-194 4-62 (159)
37 1mut_A MUTT, nucleoside tripho 99.4 5.1E-13 1.7E-17 100.6 5.5 56 127-193 9-64 (129)
38 3fk9_A Mutator MUTT protein; s 99.4 3.2E-12 1.1E-16 105.4 10.2 69 123-212 5-73 (188)
39 1v8y_A ADP-ribose pyrophosphat 99.3 1.7E-12 6E-17 104.0 8.0 69 119-205 30-99 (170)
40 3son_A Hypothetical nudix hydr 99.3 7.3E-13 2.5E-17 103.2 5.3 55 124-193 7-64 (149)
41 3fcm_A Hydrolase, nudix family 99.3 1.8E-12 6.3E-17 106.8 7.9 58 118-190 41-99 (197)
42 3e57_A Uncharacterized protein 99.3 1.6E-12 5.4E-17 112.0 7.3 81 117-207 62-146 (211)
43 2yyh_A MUTT domain, 8-OXO-DGTP 99.3 5.5E-12 1.9E-16 97.1 9.0 58 121-192 8-69 (139)
44 2fvv_A Diphosphoinositol polyp 99.3 4.4E-12 1.5E-16 105.8 7.9 69 119-206 38-107 (194)
45 3id9_A MUTT/nudix family prote 99.3 7.7E-12 2.6E-16 99.7 9.0 59 119-192 20-78 (171)
46 2yvp_A NDX2, MUTT/nudix family 99.3 1.8E-12 6.1E-17 104.8 4.7 60 123-193 42-101 (182)
47 2jvb_A Protein PSU1, mRNA-deca 99.3 3.3E-12 1.1E-16 98.9 5.6 56 123-193 5-61 (146)
48 1k2e_A Nudix homolog; nudix/MU 99.3 3.8E-12 1.3E-16 100.7 5.8 55 124-194 3-57 (156)
49 2w4e_A MUTT/nudix family prote 99.3 6.2E-12 2.1E-16 98.6 7.0 59 123-192 6-64 (145)
50 2fb1_A Conserved hypothetical 99.3 8.5E-12 2.9E-16 106.4 8.0 62 119-192 10-74 (226)
51 3q1p_A Phosphohydrolase (MUTT/ 99.3 6.9E-12 2.4E-16 104.7 7.0 56 121-192 67-122 (205)
52 3h95_A Nucleoside diphosphate- 99.2 2.4E-11 8.1E-16 100.5 9.4 57 123-192 27-84 (199)
53 3cng_A Nudix hydrolase; struct 99.2 3.4E-11 1.2E-15 98.8 9.8 58 122-192 40-97 (189)
54 3gz5_A MUTT/nudix family prote 99.2 2.1E-11 7.3E-16 105.0 8.9 72 121-209 21-97 (240)
55 3f13_A Putative nudix hydrolas 99.2 1.5E-11 5.3E-16 99.7 7.5 56 121-193 15-70 (163)
56 1u20_A U8 snoRNA-binding prote 99.2 6.2E-12 2.1E-16 106.0 5.1 66 129-210 51-117 (212)
57 3o8s_A Nudix hydrolase, ADP-ri 99.2 1.5E-11 5.1E-16 102.7 7.1 55 122-193 70-124 (206)
58 1mk1_A ADPR pyrophosphatase; n 99.2 2.2E-11 7.6E-16 101.6 7.2 67 123-205 44-111 (207)
59 1g0s_A Hypothetical 23.7 kDa p 99.2 5.9E-11 2E-15 99.7 8.4 68 123-205 58-130 (209)
60 1x51_A A/G-specific adenine DN 99.1 3.9E-11 1.3E-15 94.4 5.7 55 127-192 24-83 (155)
61 1vhz_A ADP compounds hydrolase 99.1 8.7E-11 3E-15 97.9 7.8 66 124-206 51-116 (198)
62 2qjt_B Nicotinamide-nucleotide 99.1 1E-10 3.5E-15 103.5 8.3 61 119-192 205-265 (352)
63 1vk6_A NADH pyrophosphatase; 1 99.1 1.7E-10 5.7E-15 101.9 8.6 63 128-208 145-207 (269)
64 2qjo_A Bifunctional NMN adenyl 99.1 1.3E-10 4.4E-15 102.1 7.8 61 120-193 201-261 (341)
65 2a6t_A SPAC19A8.12; alpha/beta 99.1 1.3E-10 4.4E-15 102.3 7.0 58 123-194 102-160 (271)
66 2fml_A MUTT/nudix family prote 99.1 2.8E-10 9.5E-15 99.7 9.0 60 121-192 38-102 (273)
67 3o6z_A GDP-mannose pyrophospha 99.1 1.2E-10 4E-15 96.2 5.3 69 121-205 44-118 (191)
68 3fsp_A A/G-specific adenine gl 99.0 4E-10 1.4E-14 102.7 7.6 60 122-193 240-299 (369)
69 3q91_A Uridine diphosphate glu 99.0 3.7E-10 1.2E-14 96.7 5.0 90 90-205 17-138 (218)
70 3fjy_A Probable MUTT1 protein; 99.0 7.9E-10 2.7E-14 99.6 7.4 63 131-213 35-97 (364)
71 3qsj_A Nudix hydrolase; struct 98.9 6.6E-10 2.3E-14 96.4 5.6 72 120-192 7-92 (232)
72 2dsc_A ADP-sugar pyrophosphata 98.8 2.3E-09 8E-14 89.6 4.3 58 123-193 62-125 (212)
73 1q33_A Pyrophosphatase, ADP-ri 98.8 1.8E-08 6.3E-13 89.4 8.6 42 135-191 140-181 (292)
74 2xsq_A U8 snoRNA-decapping enz 98.7 9.3E-09 3.2E-13 87.7 5.9 44 134-193 65-109 (217)
75 3kvh_A Protein syndesmos; NUDT 98.4 1.1E-07 3.9E-12 82.0 4.1 69 121-210 20-101 (214)
76 3bho_A Cleavage and polyadenyl 98.1 6.4E-06 2.2E-10 71.1 7.4 58 117-190 54-113 (208)
77 3rh7_A Hypothetical oxidoreduc 97.5 6.9E-05 2.4E-09 67.7 4.0 49 124-193 185-234 (321)
78 1zxu_A AT5G01750 protein; PFAM 55.1 7.7 0.00026 32.1 3.0 56 89-157 52-107 (217)
79 3k6e_A CBS domain protein; str 41.3 24 0.00083 27.0 3.7 31 79-109 106-136 (156)
80 3ctu_A CBS domain protein; str 40.9 31 0.0011 25.5 4.2 31 79-109 106-136 (156)
81 3lqn_A CBS domain protein; csg 35.5 36 0.0012 24.9 3.8 31 78-108 106-136 (150)
82 1yav_A Hypothetical protein BS 34.4 36 0.0012 25.3 3.7 32 77-108 104-135 (159)
83 2emq_A Hypothetical conserved 32.6 40 0.0014 24.8 3.6 31 78-108 102-132 (157)
84 3zv0_C H/ACA ribonucleoprotein 31.6 83 0.0028 26.4 5.7 52 87-154 108-161 (195)
85 3ezw_A Glycerol kinase; glycer 30.3 68 0.0023 29.7 5.5 58 125-193 16-73 (526)
86 3ifr_A Carbohydrate kinase, FG 26.3 89 0.003 28.8 5.5 57 125-192 19-75 (508)
87 2p3r_A Glycerol kinase; glycer 25.3 92 0.0031 28.7 5.4 57 125-192 15-71 (510)
88 3h3n_X Glycerol kinase; ATP-bi 24.0 1.1E+02 0.0038 28.1 5.7 57 125-192 17-73 (506)
89 2v2f_A Penicillin binding prot 23.9 42 0.0014 18.6 1.8 14 91-104 7-20 (26)
90 3gby_A Uncharacterized protein 23.4 50 0.0017 23.5 2.6 19 90-108 101-119 (128)
91 4gqw_A CBS domain-containing p 23.3 75 0.0026 22.8 3.6 19 90-108 118-136 (152)
92 2uv4_A 5'-AMP-activated protei 23.1 73 0.0025 23.4 3.6 20 89-108 125-144 (152)
93 2p9m_A Hypothetical protein MJ 22.9 76 0.0026 22.5 3.5 19 90-108 111-129 (138)
94 2ef7_A Hypothetical protein ST 22.7 75 0.0026 22.5 3.4 20 90-109 100-119 (133)
95 3g25_A Glycerol kinase; IDP007 22.5 1.1E+02 0.0036 28.1 5.2 57 125-192 18-74 (501)
96 3kpb_A Uncharacterized protein 22.4 57 0.002 22.7 2.7 20 89-108 94-113 (122)
97 3nqr_A Magnesium and cobalt ef 22.1 56 0.0019 23.3 2.6 19 90-108 101-119 (127)
98 3sl7_A CBS domain-containing p 21.1 59 0.002 24.2 2.7 20 90-109 131-150 (180)
99 3i8n_A Uncharacterized protein 20.9 61 0.0021 23.2 2.6 20 89-108 103-122 (130)
100 2nyc_A Nuclear protein SNF4; b 20.4 64 0.0022 23.0 2.7 20 89-108 115-134 (144)
101 4e1j_A Glycerol kinase; struct 20.2 1.2E+02 0.0043 28.0 5.2 56 126-192 39-94 (520)
102 4esy_A CBS domain containing m 20.2 78 0.0027 23.9 3.2 18 91-108 52-69 (170)
No 1
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=271.37 Aligned_cols=155 Identities=48% Similarity=0.701 Sum_probs=135.0
Q ss_pred ccCCCcccccccHHHHHhhhcCeEEEEcCCCcEEEEEecccccchhhcccCCeeEEEEEEEEEeCCCeEEEEEecCCCCC
Q 027372 68 TMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVT 147 (224)
Q Consensus 68 ~~~~~~~~~~~d~~q~~lm~eE~~~vvD~~d~~iG~~~R~~~Hl~~~i~~~gllHra~sv~lfn~~g~lLLqqRs~~K~t 147 (224)
..|++...+|||+.|+++| +|.|+|||++|+++|.++|+.||+++++ ++|++|++|+|+|+|++|+||||||+..|.+
T Consensus 18 ~~~~~~~~~~~~~~q~~~~-~E~~~lvd~~~~~iG~~~r~~~h~~~~~-~~g~~h~av~v~v~~~~g~lLLqrRs~~K~~ 95 (246)
T 2pny_A 18 GSMSDINLDWVDRRQLQRL-EEMLIVVDENDKVIGADTKRNCHLNENI-EKGLLHRAFSVVLFNTKNRILIQQRSDTKVT 95 (246)
T ss_dssp SCGGGGCCTTSCHHHHHHT-TCEEEEECTTCCEEEEEEHHHHTBHHHH-TTTCCEEEEEEEEECTTCCEEEEEECTTCSS
T ss_pred ccccccccccCCHHHHhhc-cceEEEEcCCCCEEEEEEhHHhcccccc-CCCcEEEEEEEEEEeCCCEEEEEEecCCCCC
Confidence 4566778999999999988 5799999999999999999999988777 4599999999999999999999999999999
Q ss_pred CCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEEEcccCCCeeeeeeeeeC
Q 027372 148 FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHERNVFI 224 (224)
Q Consensus 148 fPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y~a~~~~~wgEhEidyil 224 (224)
|||+|+++||||+++||++..++..+|+.+||+|||+|||||++..++.+++.++++++|.++.+++|++||++|+|
T Consensus 96 ~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf 172 (246)
T 2pny_A 96 FPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLL 172 (246)
T ss_dssp STTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEE
T ss_pred CCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEEEEE
Confidence 99999999999999993211111123348999999999999998766666789999999999988889999999985
No 2
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=100.00 E-value=1.8e-37 Score=268.94 Aligned_cols=154 Identities=56% Similarity=0.865 Sum_probs=123.8
Q ss_pred cCCCcccccccHHHHHhhhcCeEEEEcCCCcEEEEEecccccchhhcccCCeeEEEEEEEEEeCCCeEEEEEecCCCCCC
Q 027372 69 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTF 148 (224)
Q Consensus 69 ~~~~~~~~~~d~~q~~lm~eE~~~vvD~~d~~iG~~~R~~~Hl~~~i~~~gllHra~sv~lfn~~g~lLLqqRs~~K~tf 148 (224)
.|.+..++++|+.|+++| +|.|+|||++|+++|.++|+.||+++++ ++|++|++|+|+|+|.+|+||||||+..|.+|
T Consensus 8 ~~~~~~~~~~~~~q~~~~-~E~~~lvd~~~~~~G~~~r~~~h~~~~~-~~g~~h~av~v~v~~~~g~lLLq~R~~~k~~~ 85 (235)
T 2dho_A 8 HMPEINTNHLDKQQVQLL-AEMCILIDENDNKIGAETKKNCHLNENI-EKGLLHRAFSVFLFNTENKLLLQQRSDAKITF 85 (235)
T ss_dssp -------------CCCSS-CCEEEEECTTCCEEEEEEHHHHTBHHHH-TTTCCEEEEEEEEECTTCCEEEEEECTTCSSS
T ss_pred cCCcccccccChhHHhhc-CcEEEEEcCCCCEEEEEEhHHhcccccc-CCCceEEEEEEEEEcCCCEEEEEEecCcCCCC
Confidence 456678999999999987 5799999999999999999999988776 45999999999999999999999999999999
Q ss_pred CCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEEEcccCCCeeeeeeeeeC
Q 027372 149 PLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHERNVFI 224 (224)
Q Consensus 149 PG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y~a~~~~~wgEhEidyil 224 (224)
||+|+++||||+++||+++.++...|+.+||+|||+|||||.+..++.+++.++++++|.++.+++|++||++|+|
T Consensus 86 pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf 161 (235)
T 2dho_A 86 PGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYIL 161 (235)
T ss_dssp TTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEE
T ss_pred CCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEE
Confidence 9999999999999994422111223458999999999999998766566789999999999988889999999985
No 3
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.94 E-value=9.8e-27 Score=209.87 Aligned_cols=120 Identities=12% Similarity=0.024 Sum_probs=108.2
Q ss_pred hcCeEEEEcCCC-cEEEEEecccccchhhcccCCeeEEEEEEEEEeCCC---eEEEEEecCCCCCCCCceeecCCccCCC
Q 027372 87 FEDECILVDEND-RVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKY---ELLLQQRSGTKVTFPLVWTNTCCSHPLY 162 (224)
Q Consensus 87 ~eE~~~vvD~~d-~~iG~~~R~~~Hl~~~i~~~gllHra~sv~lfn~~g---~lLLqqRs~~K~tfPG~Wd~t~gGh~~~ 162 (224)
.+|.++|||++| +++|.++|..+|+ .|++|++|++++|+.+| +||||||+..|.+|||+||++||||+.+
T Consensus 88 r~E~~~V~~~~~~~~~~~~eR~~~~~------~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~ 161 (300)
T 3dup_A 88 RGELYRVNQSWGEPTLMLLDRAVVPT------FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPA 161 (300)
T ss_dssp CSCEEEECSSTTSCCCEEEEGGGTGG------GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCT
T ss_pred ccccEEeecCCCCeeeEEEEhhhccc------cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCC
Confidence 478999999986 8999999999996 69999999999999888 9999999999999999999999999999
Q ss_pred CCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEEEcccCCCeeeeeeeeeC
Q 027372 163 RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHERNVFI 224 (224)
Q Consensus 163 gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y~a~~~~~wgEhEidyil 224 (224)
||+ +.+||+||+.||+||+.+.+ ..+.+++.+.|.++..++ .++|++|||
T Consensus 162 GEs---------~~eaA~REl~EElGI~~~~~--~~l~~~g~i~y~~~~~~G-~~~E~~~vy 211 (300)
T 3dup_A 162 DLS---------LRQNLIKECAEEADLPEALA--RQAIPVGAITYCMESPAG-IKPDTLFLY 211 (300)
T ss_dssp TSC---------HHHHHHHHHHHHHCCCHHHH--TTCEEEEEEEEEEEETTE-EEEEEEEEE
T ss_pred CCC---------HHHHHHHHHHHHhCCChhhh--hhccccceEEEEEecCCC-eEEEEEEEE
Confidence 999 79999999999999998643 357889999998877655 588998875
No 4
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.92 E-value=1.6e-25 Score=183.78 Aligned_cols=121 Identities=32% Similarity=0.445 Sum_probs=75.2
Q ss_pred hhcCeEEEEcCCCcEEEEEecccccchhhcccCCeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCC
Q 027372 86 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRES 165 (224)
Q Consensus 86 m~eE~~~vvD~~d~~iG~~~R~~~Hl~~~i~~~gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs 165 (224)
|++|+|+|||++|+++|.+.|..||. ..|++|+++.++|++.+|++||+||+..+..+||+|+++.||+++.||+
T Consensus 1 ~~~E~~~v~d~~~~~~g~~~r~~~~~-----~~~~~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt 75 (190)
T 1hzt_A 1 MQTEHVILLNAQGVPTGTLEKYAAHT-----ADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGES 75 (190)
T ss_dssp -----------------------------------CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCC
T ss_pred CCceEEEEECCCCCEeeeEEHhhhcc-----cCCceEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCC
Confidence 67789999999999999999999995 3689999999999999999999999998889999999955999999999
Q ss_pred hhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEEEcccCCCeeeeeeeeeC
Q 027372 166 ELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHERNVFI 224 (224)
Q Consensus 166 ~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y~a~~~~~wgEhEidyil 224 (224)
+.+||+||++|||||.+..+ ..+++.+.|.....+++..+++.++|
T Consensus 76 ---------~~~aa~REl~EEtGl~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (190)
T 1hzt_A 76 ---------NEDAVIRRCRYELGVEITPP----ESIYPDFRYRATDPSGIVENEVCPVF 121 (190)
T ss_dssp ---------HHHHHHHHHHHHHCCCBSCC----EEEETTCEEEEECTTSCEEEEECCEE
T ss_pred ---------HHHHHHHHHHHHHCCCchhh----heeeeeEEEEeeCCCCCcceEEEEEE
Confidence 79999999999999998642 05677777765544445556665543
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.90 E-value=4.9e-23 Score=166.27 Aligned_cols=108 Identities=25% Similarity=0.338 Sum_probs=90.4
Q ss_pred HHHHhhhcCeEEEEcCCCcEEEEEecccccchhhcccCCeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccC
Q 027372 81 VQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHP 160 (224)
Q Consensus 81 ~q~~lm~eE~~~vvD~~d~~iG~~~R~~~Hl~~~i~~~gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~ 160 (224)
++++.|.+|.|+|||++++++|..+|..+|. .+++|+++.++++|.+|++||++|+..+..+||+|+++.||++
T Consensus 2 ~~~~~~~~E~~~i~d~~~~~~g~~~r~~~~~------~~~~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~v 75 (180)
T 2fkb_A 2 EQRRLASTEWVDIVNEENEVIAQASREQMRA------QCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVV 75 (180)
T ss_dssp ------CCCEEEEECTTSCEEEEEEHHHHHH------HTCCEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBC
T ss_pred CccccCCCeeEEEECCCCCEeeEEEHHHhhc------cCceeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCC
Confidence 3556667889999999999999999998774 5899999999999999999999999988889999999559999
Q ss_pred CCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEEE
Q 027372 161 LYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYK 208 (224)
Q Consensus 161 ~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y~ 208 (224)
+.||+ +.+||+||++|||||.+.. +.+++.+.+.
T Consensus 76 e~gE~---------~~~aa~REl~EEtGl~~~~-----~~~l~~~~~~ 109 (180)
T 2fkb_A 76 QADEQ---------LLESARREAEEELGIAGVP-----FAEHGQFYFE 109 (180)
T ss_dssp BTTCC---------HHHHHHHHHHHHHCCBSCC-----CEEEEEEEEE
T ss_pred CCCCC---------HHHHHHHHHHHHHCCCccc-----eEEEEEEEec
Confidence 99999 7999999999999998753 3556666554
No 6
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.85 E-value=4.9e-21 Score=153.37 Aligned_cols=98 Identities=26% Similarity=0.316 Sum_probs=86.1
Q ss_pred hcCeEEEEcCCCcEEEEEecccc---cchhhcccCCeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCcee-ecCCccCCC
Q 027372 87 FEDECILVDENDRVVGHENKYNC---HLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWT-NTCCSHPLY 162 (224)
Q Consensus 87 ~eE~~~vvD~~d~~iG~~~R~~~---Hl~~~i~~~gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd-~t~gGh~~~ 162 (224)
.+|.|+|||.+++++|...|..+ |. . |+++.+++++.+|++||+||+..+..+||+|+ ++ ||++++
T Consensus 5 ~~E~~~~~d~~~~~~g~~~r~~~~l~~~------~---~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~P-gG~ve~ 74 (171)
T 1q27_A 5 SDERLDLVNERDEVVGQILRTDPALRWE------R---VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSV-GGAVQS 74 (171)
T ss_dssp CSSEEEEESSSSCEEEEEESSCTTSCTT------S---CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSE-EEECSS
T ss_pred cceeeeeecCCCCEeceEEhhhhccccc------c---ceEEEEEEECCCCeEEEEEecCCCCCCCCcccccc-CccccC
Confidence 36899999999999999999988 73 2 99999999999999999999988888999999 66 999999
Q ss_pred CCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEE
Q 027372 163 RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRIL 206 (224)
Q Consensus 163 gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~ 206 (224)
||+ +.+||+||++||||+.+... ++.+++.+.
T Consensus 75 gEs---------~~~aa~REl~EEtGl~~~~~---~l~~~~~~~ 106 (171)
T 1q27_A 75 GET---------YEEAFRREAREELNVEIDAL---SWRPLASFS 106 (171)
T ss_dssp SSC---------HHHHHHHHHHHHHSCTTSSS---CEEEEEEEC
T ss_pred CCC---------HHHHHHHHHHHHHCCccccc---ceEEEEEEe
Confidence 999 79999999999999998642 356666654
No 7
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.65 E-value=6.7e-16 Score=122.71 Aligned_cols=66 Identities=20% Similarity=0.193 Sum_probs=55.4
Q ss_pred CCeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 118 LNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 118 ~gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
.+..|+++.++|++.+|++||+||+..+..+||+|.+| ||+++.||+ +.+||+||+.|||||.+..
T Consensus 23 ~~~~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~ 88 (165)
T 3oga_A 23 NAMRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALS-GGGVEPGER---------IEEALRREIREELGEQLIL 88 (165)
T ss_dssp -CCEEEEEEEEEEEETTEEEEEEECC------CCEECC-CEECCTTCC---------HHHHHHHHHHHHHCSSCCE
T ss_pred CCcceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccc
Confidence 47899999999999999999999998888899999999 999999999 7999999999999999864
No 8
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.59 E-value=5.6e-15 Score=115.64 Aligned_cols=77 Identities=25% Similarity=0.275 Sum_probs=64.3
Q ss_pred CCeeEEEEEEEEEeCCCeEEEEEecCC--CCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCC
Q 027372 118 LNLLHRAFSVFLFNSKYELLLQQRSGT--KVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 195 (224)
Q Consensus 118 ~gllHra~sv~lfn~~g~lLLqqRs~~--K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~ 195 (224)
....|+++.++|+|.+|++||+||... +..++|+|+++ ||+++.||+ +.+||+||+.||||+.+..
T Consensus 9 ~~~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~-- 76 (159)
T 1sjy_A 9 VPVELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGEN---------PQDAAVREACEETGLRVRP-- 76 (159)
T ss_dssp CCCCEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECS-EEECCTTSC---------HHHHHHHHHHHHHSCCEEE--
T ss_pred CCeEEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHHCcccee--
Confidence 478899999999999999999999863 55689999998 999999999 7999999999999999753
Q ss_pred CCceeeeeEEEEEc
Q 027372 196 VDEFTPLGRILYKA 209 (224)
Q Consensus 196 ~~~l~~lgri~Y~a 209 (224)
+.+++.+.+..
T Consensus 77 ---~~~l~~~~~~~ 87 (159)
T 1sjy_A 77 ---VKFLGAYLGRF 87 (159)
T ss_dssp ---EEEEEEEEEEC
T ss_pred ---eEEEEEEeccc
Confidence 45666665543
No 9
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.58 E-value=1.1e-14 Score=114.36 Aligned_cols=76 Identities=21% Similarity=0.215 Sum_probs=64.9
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCc
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~ 198 (224)
...|.++.++|+|.+|++||+||...+..++|+|.+| ||+++.||+ +.+||+||+.||+||.+...
T Consensus 5 ~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~~---- 70 (153)
T 3grn_A 5 KPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDES---------LKEGVAREVWEETGITMVPG---- 70 (153)
T ss_dssp SCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCCC----
T ss_pred CceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCC---------HHHHHHhhhhhhhCcEeecc----
Confidence 4578899999999999999999998877899999999 999999999 79999999999999998643
Q ss_pred eeeeeEEEEEc
Q 027372 199 FTPLGRILYKA 209 (224)
Q Consensus 199 l~~lgri~Y~a 209 (224)
.+++.+.+..
T Consensus 71 -~~~~~~~~~~ 80 (153)
T 3grn_A 71 -DIAGQVNFEL 80 (153)
T ss_dssp -SEEEEEEEEC
T ss_pred -eEEEEEEEec
Confidence 3455554443
No 10
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.54 E-value=3.6e-14 Score=109.35 Aligned_cols=65 Identities=22% Similarity=0.210 Sum_probs=58.0
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
...++++.++|++.+|++||+||...+. ++|+|.++ ||+++.||+ +.+||+||+.||+|+.+...
T Consensus 5 ~~~~~~~~~vi~~~~~~vLl~~r~~~~~-~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~ 69 (144)
T 3r03_A 5 LPILLVTAAALIDPDGRVLLAQRPPGKS-LAGLWEFP-GGKLEPGET---------PEAALVRELAEELGVDTRAS 69 (144)
T ss_dssp -CEEEEEEEEEBCTTSCEEEEECCTTSS-STTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGG
T ss_pred CceeEEEEEEEEcCCCEEEEEEeCCCCC-CCCcEECC-CcEecCCCC---------HHHHHHHHHHHHhCceeecc
Confidence 4578888999999999999999997765 99999999 999999999 79999999999999998653
No 11
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.53 E-value=5.2e-14 Score=110.20 Aligned_cols=75 Identities=19% Similarity=0.102 Sum_probs=61.5
Q ss_pred eEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCcee
Q 027372 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (224)
Q Consensus 121 lHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~ 200 (224)
...++.+++++.+|++||+||+.. .++|+|++| ||+++.||+ +.+||+||+.|||||.+.. ..+.
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~--~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~---~~~~ 81 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNR--PAQGYWFVP-GGRVQKDET---------LEAAFERLTMAELGLRLPI---TAGQ 81 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSS--SSTTSEECC-EEECCTTCC---------HHHHHHHHHHHHHSSCCCG---GGSE
T ss_pred cEEEEEEEEEcCCCEEEEEeccCC--CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCCCCCc---ccce
Confidence 446888999998999999999863 379999999 999999999 7999999999999998631 2456
Q ss_pred eeeEEEEEcc
Q 027372 201 PLGRILYKAP 210 (224)
Q Consensus 201 ~lgri~Y~a~ 210 (224)
+++.+.+..+
T Consensus 82 ~~~~~~~~~~ 91 (160)
T 1rya_A 82 FYGVWQHFYD 91 (160)
T ss_dssp EEEEEEEEES
T ss_pred EEEEEeEEEc
Confidence 7777665443
No 12
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.53 E-value=2.9e-14 Score=112.63 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=54.6
Q ss_pred cccCCeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 115 IESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 115 i~~~gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
+.....+|.++.++|+|.+|++||+||+ +|.|.++ ||+++.||+ +.+||+||++|||||.+..
T Consensus 14 ~~~~~~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~ 76 (153)
T 3eds_A 14 LGHELIFXPSVAAVIKNEQGEILFQYPG------GEYWSLP-AGAIELGET---------PEEAVVREVWEETGLKVQV 76 (153)
T ss_dssp HTTSCEEEEEEEEEEBCTTCCEEEECC---------CBBCS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEE
T ss_pred cCCCcEEeeeEEEEEEcCCCeEEEEEcC------CCcEECC-ccccCCCCC---------HHHHHHHHHHHHHCcccee
Confidence 3346789999999999999999999997 7999999 999999999 7999999999999998753
No 13
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.50 E-value=1.4e-14 Score=113.46 Aligned_cols=61 Identities=25% Similarity=0.318 Sum_probs=56.1
Q ss_pred CCeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 118 LNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 118 ~gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
.|.+|+++.++++|.+|++||+||.. +||+|++| ||+++.||+ +.+||+||++|||||.+.
T Consensus 10 ~~~~~~~v~~~i~~~~~~vLl~~r~~----~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~ 70 (165)
T 1f3y_A 10 PEGYRRNVGICLMNNDKKIFAASRLD----IPDAWQMP-QGGIDEGED---------PRNAAIRELREETGVTSA 70 (165)
T ss_dssp CSSCCCEEEEEEECTTSCEEEEEETT----EEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCSE
T ss_pred ccceeeeEEEEEECCCCcEEEEecCC----CCCcEECC-eeccCCCCC---------HHHHHHHHHHHhhCCChh
Confidence 47899999999999999999999973 57999999 999999999 799999999999999864
No 14
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.49 E-value=1.1e-13 Score=109.11 Aligned_cols=65 Identities=22% Similarity=0.266 Sum_probs=57.9
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
...++++.++|++.+|++||+||...+. ++|+|.++ ||+++.||+ +.+||+||+.||+|+.+...
T Consensus 26 ~~~~~~~~~~i~~~~~~vLL~~r~~~~~-~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~ 90 (158)
T 3hhj_A 26 SSLLIVVACALLDQDNRVLLTQRPEGKS-LAGLWEFP-GGKVEQGET---------PEASLIRELEEELGVHVQAD 90 (158)
T ss_dssp -CEEEEEEEEEBCTTSEEEEEECCCTTS-CCCCCBCC-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGG
T ss_pred CceEEEEEEEEEeCCCEEEEEEeCCCCC-CCCEEECC-ceeecCCCC---------HHHHHHHHHHHHhCcEeecc
Confidence 4678888999999999999999987754 89999999 999999999 79999999999999998653
No 15
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.49 E-value=1.7e-13 Score=109.27 Aligned_cols=77 Identities=16% Similarity=0.168 Sum_probs=64.1
Q ss_pred CCeeEEEEEEEEEeCC-CeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCC
Q 027372 118 LNLLHRAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 196 (224)
Q Consensus 118 ~gllHra~sv~lfn~~-g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~ 196 (224)
....|.++.++|++.+ |++||+||.. ..|+|.|.+| ||++++||+ +.+||+||+.|||||.+..
T Consensus 6 ~~~~~~~v~~vi~~~~~~~vLL~~r~~--~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~--- 70 (161)
T 3exq_A 6 TQPVELVTMVMVTDPETQRVLVEDKVN--VPWKAGHSFP-GGHVEVGEP---------CATAAIREVFEETGLRLSG--- 70 (161)
T ss_dssp CCCEEEEEEEEEBCTTTCCEEEECCCC--CTTTCSBBCC-CCBCCTTSC---------HHHHHHHHHHHHHCCEESC---
T ss_pred cCCceEEEEEEEEeCCCCEEEEEEccC--CCCCCCEEcc-ceecCCCCC---------HHHHHHHHHHHhhCcEecC---
Confidence 3568889999999887 7999999983 4588999998 999999999 7999999999999999763
Q ss_pred CceeeeeEEEEEccc
Q 027372 197 DEFTPLGRILYKAPS 211 (224)
Q Consensus 197 ~~l~~lgri~Y~a~~ 211 (224)
+.+++.+.+..+.
T Consensus 71 --~~~~~~~~~~~~~ 83 (161)
T 3exq_A 71 --VTFCGTCEWFDDD 83 (161)
T ss_dssp --CEEEEEEEEECSS
T ss_pred --CcEEEEEecccCC
Confidence 3567777666543
No 16
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.48 E-value=1.1e-13 Score=108.59 Aligned_cols=72 Identities=24% Similarity=0.275 Sum_probs=57.1
Q ss_pred EEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceee
Q 027372 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (224)
Q Consensus 122 Hra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~ 201 (224)
|.+++++|++ +|++||.||. .|.|.+| |||+++||+ +.+||+||++|||||.+.. +.+
T Consensus 4 ~~aag~vv~~-~~~vLL~~r~------~g~W~~P-gG~ve~gEt---------~~~aa~RE~~EEtGl~~~~-----~~~ 61 (134)
T 3i7u_A 4 EFSAGGVLFK-DGEVLLIKTP------SNVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEI-----LDY 61 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECT------TSCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEE
T ss_pred EEEEEEEEEE-CCEEEEEEeC------CCcEECC-eeEecCCCC---------HHHHHHHHHHHhcCceEEE-----eee
Confidence 4566777776 5899999885 3789999 999999999 7999999999999999753 356
Q ss_pred eeEEEEEcccCCCe
Q 027372 202 LGRILYKAPSDGKW 215 (224)
Q Consensus 202 lgri~Y~a~~~~~w 215 (224)
++.+.|..+..+..
T Consensus 62 l~~~~~~~~~~~~~ 75 (134)
T 3i7u_A 62 IGEIHYWYTLKGER 75 (134)
T ss_dssp EEEEEEEEEETTEE
T ss_pred eeeeeEEecCCCce
Confidence 77776665554443
No 17
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.48 E-value=9.7e-14 Score=107.42 Aligned_cols=71 Identities=18% Similarity=0.120 Sum_probs=51.5
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCC-CCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceee
Q 027372 123 RAFSVFLFNSKYELLLQQRSGTKVT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (224)
Q Consensus 123 ra~sv~lfn~~g~lLLqqRs~~K~t-fPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~ 201 (224)
.++.++|++ +|++||+||...+.. ++|+|.+| ||+++.||+ +.+||+||+.||+||.+.. ..+
T Consensus 7 ~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~-----~~~ 70 (140)
T 3gwy_A 7 EVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGES---------LQEALQREIMEEMDYVIEV-----GEK 70 (140)
T ss_dssp EEEEEEEEE-TTEEEEEEC---------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEEE-----EEE
T ss_pred EEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCC---------HHHHHHHHHHHhhCcEEEe-----ceE
Confidence 456667777 799999999987653 89999999 999999999 7999999999999998753 345
Q ss_pred eeEEEEEc
Q 027372 202 LGRILYKA 209 (224)
Q Consensus 202 lgri~Y~a 209 (224)
++.+.|..
T Consensus 71 ~~~~~~~~ 78 (140)
T 3gwy_A 71 LLTVHHTY 78 (140)
T ss_dssp EEEEECCC
T ss_pred EEEEEEEe
Confidence 55554433
No 18
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.47 E-value=2.5e-13 Score=109.43 Aligned_cols=60 Identities=20% Similarity=0.314 Sum_probs=54.7
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
..+|.++.+++++.+|++||++|.. +|.|.++ ||+++.||+ +.+||+||+.|||||.+..
T Consensus 5 ~~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p-~G~~e~gE~---------~~~aa~RE~~EE~G~~~~~ 64 (164)
T 2kdv_A 5 DGYRPNVGIVICNRQGQVMWARRFG-----QHSWQFP-QGGINPGES---------AEQAMYRELFEEVGLSRKD 64 (164)
T ss_dssp SSEEEEEEEEEECTTSEEEEEEETT-----CCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCGGG
T ss_pred CCCCcEEEEEEEccCCEEEEEEEcC-----CCeEECC-eeecCCCCC---------HHHHHHHHHHHHHCCCccc
Confidence 4589999999999999999999974 6899999 999999999 7999999999999999763
No 19
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.47 E-value=3.5e-13 Score=107.06 Aligned_cols=73 Identities=21% Similarity=0.173 Sum_probs=60.5
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCc
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~ 198 (224)
...|.++.++|++ +|+|||+||.... ++|.|.++ ||+++.||+ +.+||+||++|||||.+...
T Consensus 26 ~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~---- 88 (157)
T 4dyw_A 26 EQPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLP-GGKVDWLEP---------VERAVCREIEEELGIALERA---- 88 (157)
T ss_dssp CCCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEEESC----
T ss_pred CCceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECC-cccCCCCCC---------HHHHHHHHHHHHHCcccccC----
Confidence 4578888999998 7999999998654 79999999 999999999 79999999999999998643
Q ss_pred eeeeeEEEEEc
Q 027372 199 FTPLGRILYKA 209 (224)
Q Consensus 199 l~~lgri~Y~a 209 (224)
.+++.+.+..
T Consensus 89 -~~~~~~~~~~ 98 (157)
T 4dyw_A 89 -TLLCVVDHID 98 (157)
T ss_dssp -EEEEEEEEEE
T ss_pred -cEEEEEEeec
Confidence 4455554443
No 20
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.46 E-value=2.1e-13 Score=104.29 Aligned_cols=73 Identities=22% Similarity=0.156 Sum_probs=58.6
Q ss_pred eEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCcee
Q 027372 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (224)
Q Consensus 121 lHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~ 200 (224)
-|+.+.++|++.+|++||+||+..+ .++|+|+++ ||+++.||+ +.+||+||+.||+|+.+.. +.
T Consensus 7 ~~~~~~~~ii~~~~~vLl~~r~~~~-~~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~ 70 (140)
T 2rrk_A 7 KMIEVVAAIIERDGKILLAQRPAQS-DQAGLWEFA-GGKVEPDES---------QRQALVRELREELGIEATV-----GE 70 (140)
T ss_dssp CEEEEEEEEEEETTEEEEEECCSSC-SCCCCEECC-EEECCTTSC---------HHHHHHHHHHHHSCEEEEC-----CE
T ss_pred ccceEEEEEEEcCCEEEEEEcCCCC-CCCCEEECC-ceecCCCCC---------HHHHHHHHHHHHHCCeeec-----cc
Confidence 4566666666788999999998765 489999999 999999999 7999999999999998753 24
Q ss_pred eeeEEEEEc
Q 027372 201 PLGRILYKA 209 (224)
Q Consensus 201 ~lgri~Y~a 209 (224)
+++.+.|..
T Consensus 71 ~~~~~~~~~ 79 (140)
T 2rrk_A 71 YVASHQREV 79 (140)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEec
Confidence 555554443
No 21
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.46 E-value=2.6e-13 Score=103.06 Aligned_cols=70 Identities=24% Similarity=0.285 Sum_probs=56.9
Q ss_pred EEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceee
Q 027372 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (224)
Q Consensus 122 Hra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~ 201 (224)
..++.++|++ +|++||+||.. |.|.+| ||+++.||+ +.+||+||+.||+|+.+.. ..+
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~~ 61 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEI-----LDY 61 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECC-ccccCCCCC---------HHHHHHHHHHHHHCCccEE-----eee
Confidence 3567788888 68999999965 899999 999999999 7999999999999999753 356
Q ss_pred eeEEEEEcccCC
Q 027372 202 LGRILYKAPSDG 213 (224)
Q Consensus 202 lgri~Y~a~~~~ 213 (224)
++.+.|..+..+
T Consensus 62 ~~~~~~~~~~~~ 73 (134)
T 2pbt_A 62 IGEIHYWYTLKG 73 (134)
T ss_dssp EEEEEEEEEETT
T ss_pred eeEEEEEeeCCC
Confidence 776666555443
No 22
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.45 E-value=2.4e-13 Score=103.94 Aligned_cols=60 Identities=30% Similarity=0.330 Sum_probs=50.7
Q ss_pred eEEEEEEEEEeC---CCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 121 LHRAFSVFLFNS---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 121 lHra~sv~lfn~---~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
.++++.+++++. ++++||+||+. .||.|.+| ||++++||+ +.+||+||+.||||+.++.+
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~ 64 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPP-KGHVDPGED---------EWQAAIRETKEEANITKEQL 64 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESS----TTCCEESS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGGE
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCC-ccccCCCCC---------HHHHHHHHHHHHHCCCccce
Confidence 357788888876 46899999973 36899998 999999999 79999999999999976543
No 23
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.45 E-value=2.1e-13 Score=107.89 Aligned_cols=49 Identities=33% Similarity=0.292 Sum_probs=43.3
Q ss_pred eCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 131 NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 131 n~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
|+++++||.||+.. ||.|.+| ||++++||+ +.+||+||++||||+.+..
T Consensus 21 n~~~e~LL~~r~~~----~~~W~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~~~~ 69 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWTPP-KGHVEPGED---------DLETALRETQEEAGIEAGQ 69 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEECS-EEECCSSCC---------HHHHHHHHHHHHHCCCGGG
T ss_pred CCCcEEEEEEecCC----CCCEECC-eeeccCCCC---------HHHHHHHHHHHHHCCcccc
Confidence 55668999999754 5899999 999999999 7999999999999999864
No 24
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.45 E-value=4.4e-13 Score=109.15 Aligned_cols=74 Identities=18% Similarity=0.309 Sum_probs=61.6
Q ss_pred eEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCcee
Q 027372 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (224)
Q Consensus 121 lHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~ 200 (224)
-|+++.+++++.+|++||+||... .++|+|.++ ||+++.||+ +.+||+||+.|||||.+.. +.
T Consensus 23 ~~~~~~~~vi~~~~~vLL~~r~~~--~~~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~ 85 (176)
T 3q93_A 23 ASRLYTLVLVLQPQRVLLGMKKRG--FGAGRWNGF-GGKVQEGET---------IEDGARRELQEESGLTVDA-----LH 85 (176)
T ss_dssp CEEEEEEEEEECSSEEEEEEECSS--TTTTSEECE-EEECCTTSC---------HHHHHHHHHHHHHSCEESC-----CE
T ss_pred CCcEEEEEEEEeCCEEEEEEEcCC--CCCCeEECc-eecCCCCCC---------HHHHHHHHHHHHHCCccee-----eE
Confidence 467777777888899999999654 479999999 999999999 7999999999999999853 46
Q ss_pred eeeEEEEEccc
Q 027372 201 PLGRILYKAPS 211 (224)
Q Consensus 201 ~lgri~Y~a~~ 211 (224)
+++.+.|..+.
T Consensus 86 ~l~~~~~~~~~ 96 (176)
T 3q93_A 86 KVGQIVFEFVG 96 (176)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEEcCC
Confidence 77777766554
No 25
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.44 E-value=3.6e-13 Score=104.17 Aligned_cols=62 Identities=23% Similarity=0.214 Sum_probs=54.0
Q ss_pred EEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 122 Hra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
++.+.++|++.+|++||+||...+ .++|+|.++ ||+++.||+ +.+||+||+.||+|+.+...
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~ 82 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENN-SLAGQWEFP-GGKIENGET---------PEEALARELNEELGIEAEVG 82 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTS-TTTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHSCEEECC
T ss_pred eEEEEEEEEEECCEEEEEEeCCCC-CCCCeEECC-ceeeCCCCC---------HHHHHHHHHHHHHCCccccC
Confidence 556666777788999999998875 589999999 999999999 79999999999999988643
No 26
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.42 E-value=5.8e-13 Score=104.31 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=50.6
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
..+|.++.++|++ +|++||+|| +|.|.+| ||++++||+ +.+||+||+.||||+.+..
T Consensus 16 ~~~~~~~~~ii~~-~~~vLl~~r-------~~~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~ 72 (154)
T 2pqv_A 16 TVFGVRATALIVQ-NHKLLVTKD-------KGKYYTI-GGAIQVNES---------TEDAVVREVKEELGVKAQA 72 (154)
T ss_dssp EEEEEEEEECCEE-TTEEEEEEE-------TTEEECE-EEECBTTCC---------HHHHHHHHHHHHHCCCEEE
T ss_pred ceEeEEEEEEEEE-CCEEEEEec-------CCeEECc-ccCcCCCCC---------HHHHHHHHHHHHhCCeeee
Confidence 4677788888886 689999999 6899998 999999999 7999999999999999763
No 27
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.42 E-value=9.6e-13 Score=99.15 Aligned_cols=66 Identities=32% Similarity=0.375 Sum_probs=55.8
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeee
Q 027372 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 202 (224)
Q Consensus 123 ra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~l 202 (224)
.++.+++++.+|++||+||.. |+|++| |||++.||+ +.+||+||+.||+|+.+.. +.++
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~------g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~~~ 61 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM------GFWVFP-KGHPEPGES---------LEEAAVREVWEETGVRAEV-----LLPL 61 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT------SCEECC-EECCCTTCC---------HHHHHHHHHHHHHCCEEEE-----EEEE
T ss_pred eEEEEEEEcCCCEEEEEEECC------CCccCC-cCcCCCCCC---------HHHHHHHHHHHhhCcEeee-----ccEE
Confidence 367888999999999999974 889999 999999999 7999999999999998753 3556
Q ss_pred eEEEEEc
Q 027372 203 GRILYKA 209 (224)
Q Consensus 203 gri~Y~a 209 (224)
+.+.|..
T Consensus 62 ~~~~~~~ 68 (126)
T 1vcd_A 62 YPTRYVN 68 (126)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 6666654
No 28
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.42 E-value=3.4e-13 Score=103.73 Aligned_cols=57 Identities=21% Similarity=0.310 Sum_probs=51.2
Q ss_pred EEEEEEEEeCC-CeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 123 RAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 123 ra~sv~lfn~~-g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
.++.+++++.+ |++||+||+.. ||+|++| |||++.||+ +.+||+||+.|||||.+..
T Consensus 10 ~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~ 67 (150)
T 2o1c_A 10 VSILVVIYAQDTKRVLMLQRRDD----PDFWQSV-TGSVEEGET---------APQAAMREVKEEVTIDVVA 67 (150)
T ss_dssp EEEEEEEEETTTCEEEEEECSSS----TTCEESE-EEECCTTCC---------HHHHHHHHHHHHHCCCHHH
T ss_pred eEEEEEEEeCCCCEEEEEEecCC----CCceECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccc
Confidence 57888999875 89999999764 7999999 999999999 7999999999999999864
No 29
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.41 E-value=3.4e-13 Score=105.83 Aligned_cols=63 Identities=19% Similarity=0.217 Sum_probs=55.3
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
.-.++++.+++++.+|++||+||... .++|.|.++ |||++.||+ +.+||+||++|||||.+..
T Consensus 17 ~~~~~~v~~~i~~~~~~vLl~~r~~~--~~~~~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~ 79 (156)
T 3gg6_A 17 KNVCYVVLAVFLSEQDEVLLIQEAKR--ECRGSWYLP-AGRMEPGET---------IVEALQREVKEEAGLHCEP 79 (156)
T ss_dssp TTCEEEEEEECBCTTSEEEEEECCCT--TSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEE
T ss_pred CceEEEEEEEEEeCCCEEEEEEecCC--CCCCEEECC-eeeccCCCC---------HHHHHHHHHHHhhCceeEe
Confidence 34667888888999999999999854 389999999 999999999 7999999999999998754
No 30
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.41 E-value=6.3e-13 Score=103.99 Aligned_cols=72 Identities=10% Similarity=0.117 Sum_probs=54.9
Q ss_pred CeeEEEEEEEEEeCCCe----EEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 119 NLLHRAFSVFLFNSKYE----LLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 119 gllHra~sv~lfn~~g~----lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
...|.++.++|++ +|+ +||++|...+ +|| |.+| ||+++.||+ +.+||+||+.||||+.+..
T Consensus 5 ~~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~--~~g-w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~- 69 (155)
T 2b06_A 5 QLTILTNICLIED-LETQRVVMQYRAPENNR--WSG-YAFP-GGHVENDEA---------FAESVIREIYEETGLTIQN- 69 (155)
T ss_dssp GCEEEEEEEEEEE-TTTTEEEEEEEC-------CCE-EECC-CCBCCTTSC---------HHHHHHHHHHHHHSEEEES-
T ss_pred cCcEEEEEEEEEE-CCCCeEEEEEEECCCCC--CCC-Eecc-ceecCCCCC---------HHHHHHHHHHHHhCccccC-
Confidence 4578888888887 566 9999998775 788 9998 999999999 7999999999999998863
Q ss_pred CCCceeeeeEEEEEc
Q 027372 195 PVDEFTPLGRILYKA 209 (224)
Q Consensus 195 ~~~~l~~lgri~Y~a 209 (224)
..+++.+.+..
T Consensus 70 ----~~~~~~~~~~~ 80 (155)
T 2b06_A 70 ----PQLVGIKNWPL 80 (155)
T ss_dssp ----CEEEEEEEEEC
T ss_pred ----CcEEEEEeecc
Confidence 34566655544
No 31
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.41 E-value=3.5e-13 Score=110.24 Aligned_cols=64 Identities=20% Similarity=0.078 Sum_probs=49.8
Q ss_pred CeeEEEEEEEEEeCCC--eEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 119 NLLHRAFSVFLFNSKY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 119 gllHra~sv~lfn~~g--~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
+..|.++.+++ +.+| ++||+||+..+..++|.|+++ ||+++.||+ +.+||+||++|||||.+..
T Consensus 32 ~~~~~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~ 97 (194)
T 1nqz_A 32 HYRRAAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFP-GGSLDAGET---------PTQAALREAQEEVALDPAA 97 (194)
T ss_dssp -CEEEEEEEEE-ESSSSCBBCEEEEC------CCCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGG
T ss_pred CCceEEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCccc
Confidence 55666665555 7788 899999998877789999998 999999999 7999999999999998764
No 32
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.41 E-value=7.5e-13 Score=103.34 Aligned_cols=70 Identities=21% Similarity=0.337 Sum_probs=55.4
Q ss_pred EEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceee
Q 027372 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (224)
Q Consensus 122 Hra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~ 201 (224)
|.++.+++. .+|++||+||. ...+|.|.++ ||+++.||+ +.+||+||++||||+.+.. ..+
T Consensus 5 ~~~v~~ii~-~~~~vLl~~r~---~~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~~ 65 (153)
T 3shd_A 5 HVTVACVVH-AEGKFLVVEET---INGKALWNQP-AGHLEADET---------LVEAAARELWEETGISAQP-----QHF 65 (153)
T ss_dssp EEEEEEEEE-ETTEEEEEEEE---ETTEEEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCC-----CEE
T ss_pred ceEEEEEEE-eCCEEEEEEec---CCCCCCEECC-eEEeCCCCC---------HHHHHHHHHHHHHCccccc-----CcE
Confidence 445555554 57899999998 2357899999 999999999 7999999999999999764 345
Q ss_pred eeEEEEEcc
Q 027372 202 LGRILYKAP 210 (224)
Q Consensus 202 lgri~Y~a~ 210 (224)
++.+.|..+
T Consensus 66 ~~~~~~~~~ 74 (153)
T 3shd_A 66 IRMHQWIAP 74 (153)
T ss_dssp EEEEEECCT
T ss_pred EEEEEEecC
Confidence 666666555
No 33
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.40 E-value=1.3e-12 Score=101.56 Aligned_cols=71 Identities=17% Similarity=0.159 Sum_probs=56.0
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeee
Q 027372 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 202 (224)
Q Consensus 123 ra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~l 202 (224)
.++.+++ +.+|++||+||...+. +|+|.+| ||+++.||+ +.+||+||++|||||.+.. ..++
T Consensus 9 ~~v~~ii-~~~~~vLl~~r~~~~~--~~~w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~-----~~~~ 70 (153)
T 2b0v_A 9 VTVAAVI-EQDDKYLLVEEIPRGT--AIKLNQP-AGHLEPGES---------IIQACSREVLEETGHSFLP-----EVLT 70 (153)
T ss_dssp EEEEEEC-EETTEEEEEEECSSSS--CCEEECS-EEECCTTSC---------HHHHHHHHHHHHHSEEEEE-----EEEE
T ss_pred EEEEEEE-eeCCEEEEEEEcCCCC--CCeEECC-CcCcCCCCC---------HHHHHHHHHHHhhCcEecc-----ceEE
Confidence 3444444 4678999999987654 8999999 999999999 7999999999999999753 3556
Q ss_pred eEEEEEccc
Q 027372 203 GRILYKAPS 211 (224)
Q Consensus 203 gri~Y~a~~ 211 (224)
+.+.|..+.
T Consensus 71 ~~~~~~~~~ 79 (153)
T 2b0v_A 71 GIYHWTCAS 79 (153)
T ss_dssp EEEEEEETT
T ss_pred EEEEEeCCC
Confidence 666665554
No 34
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.39 E-value=7.4e-13 Score=102.13 Aligned_cols=58 Identities=21% Similarity=0.177 Sum_probs=50.4
Q ss_pred eeEEEEEEEEEeC-CCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 120 LLHRAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 120 llHra~sv~lfn~-~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
..|.++.++|+++ +|++||+||. +|.|++| ||+++.||+ +.+||+||+.||||+.+..
T Consensus 16 ~~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~ 74 (148)
T 2azw_A 16 QTRYAAYIIVSKPENNTMVLVQAP------NGAYFLP-GGEIEGTET---------KEEAIHREVLEELGISVEI 74 (148)
T ss_dssp EECCEEEEECEEGGGTEEEEEECT------TSCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE
T ss_pred eeeeEEEEEEECCCCCeEEEEEcC------CCCEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCeeEe
Confidence 4566778888886 7899999984 3899999 999999999 7999999999999998753
No 35
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.37 E-value=1.3e-12 Score=106.68 Aligned_cols=74 Identities=20% Similarity=0.130 Sum_probs=57.7
Q ss_pred CeeEEEEEEEEEe---C----CCeEEEEEecC-----CCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHH
Q 027372 119 NLLHRAFSVFLFN---S----KYELLLQQRSG-----TKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDE 186 (224)
Q Consensus 119 gllHra~sv~lfn---~----~g~lLLqqRs~-----~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EE 186 (224)
...|.++.++|+. . +++|||+||+. .+..++|.|.++ ||+++.||+ +.+||+||++||
T Consensus 24 ~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs---------~~~aa~REl~EE 93 (187)
T 3i9x_A 24 TPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENES---------AEQAAERELEEE 93 (187)
T ss_dssp CCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSC---------HHHHHHHHHHHH
T ss_pred CcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCC---------HHHHHHHHHHHH
Confidence 3456677766654 2 46899999975 455689999999 999999999 799999999999
Q ss_pred hCCCccCCCCCceeeeeEEEE
Q 027372 187 LGICAEDVPVDEFTPLGRILY 207 (224)
Q Consensus 187 lGI~~~~v~~~~l~~lgri~Y 207 (224)
|||.+.. +.+++.+.+
T Consensus 94 tGl~~~~-----~~~l~~~~~ 109 (187)
T 3i9x_A 94 TSLTDIP-----LIPFGVFDK 109 (187)
T ss_dssp HCCCSCC-----CEEEEEECC
T ss_pred HCCCCcc-----eEEEEEEcC
Confidence 9998753 356665443
No 36
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.37 E-value=8.2e-13 Score=104.43 Aligned_cols=59 Identities=22% Similarity=0.143 Sum_probs=52.5
Q ss_pred eeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 120 LLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 120 llHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
..|.++.++|++ +|++||+||.. +|.|.++ ||+++.||+ +.+||+||++|||||.+...
T Consensus 4 ~~~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~ 62 (159)
T 3f6a_A 4 NRHFTVSVFIVC-KDKVLLHLHKK-----AKKMLPL-GGHIEVNEL---------PEEACIREAKEEAGLNVTLY 62 (159)
T ss_dssp CSCEEEEEEEEE-TTEEEEEECSS-----SCCEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCEEC
T ss_pred cceEEEEEEEEE-CCEEEEEEcCC-----CCeEECC-ccCccCCCC---------HHHHHHHHHHHHhCCCceec
Confidence 358889999998 78999999874 6899998 999999999 79999999999999998654
No 37
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.37 E-value=5.1e-13 Score=100.57 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=49.6
Q ss_pred EEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 127 VFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 127 v~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
++|++.+|++||+||...+ .++|+|++| ||+++.||+ +.+||+||+.||+|+.+..
T Consensus 9 ~ii~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~~e~gE~---------~~~aa~RE~~EE~G~~~~~ 64 (129)
T 1mut_A 9 GIIRNENNEIFITRRAADA-HMANKLEFP-GGKIEMGET---------PEQAVVRELQEEVGITPQH 64 (129)
T ss_dssp EECEETTTEEEEEECSSCC-SSSCCEECC-CCCSSSCSS---------TTHHHHHHHHTTTCCSSCE
T ss_pred EEEEecCCEEEEEEeCCCC-CCCCeEECC-ccCcCCCCC---------HHHHHHHHHHHHhCCcccc
Confidence 3456888999999999876 689999998 999999999 6899999999999998753
No 38
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.36 E-value=3.2e-12 Score=105.40 Aligned_cols=69 Identities=17% Similarity=0.199 Sum_probs=54.9
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeee
Q 027372 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 202 (224)
Q Consensus 123 ra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~l 202 (224)
+++.++|++ +|++||+||. .+|+|.+| ||+++.||+ +.+||+||+.|||||.+.. ..++
T Consensus 5 ~v~~~vi~~-~~~vLL~~r~-----~~g~W~lP-GG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~~~ 63 (188)
T 3fk9_A 5 RVTNCIVVD-HDQVLLLQKP-----RRGWWVAP-GGKMEAGES---------ILETVKREYWEETGITVKN-----PELK 63 (188)
T ss_dssp EEEEEEEEE-TTEEEEEECT-----TTCCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEESS-----CEEE
T ss_pred EEEEEEEEE-CCEEEEEEeC-----CCCeEECC-eecccCCCC---------HHHHHHHHHHHHHCCCCCC-----ceEE
Confidence 566777776 6899999984 37999999 999999999 7999999999999998764 2455
Q ss_pred eEEEEEcccC
Q 027372 203 GRILYKAPSD 212 (224)
Q Consensus 203 gri~Y~a~~~ 212 (224)
+.+.+..+.+
T Consensus 64 ~~~~~~~~~~ 73 (188)
T 3fk9_A 64 GIFSMVIFDE 73 (188)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEEecCC
Confidence 5555554443
No 39
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.35 E-value=1.7e-12 Score=104.02 Aligned_cols=69 Identities=17% Similarity=0.125 Sum_probs=56.6
Q ss_pred CeeEE-EEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 027372 119 NLLHR-AFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (224)
Q Consensus 119 gllHr-a~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~ 197 (224)
.+.|+ ++.+++++ +|++||.||.... .++|+|++| ||++++||+ +.+||+||+.||||+ +.
T Consensus 30 ~~~~~~~v~vii~~-~~~vLL~~~~r~~-~~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl-~~----- 91 (170)
T 1v8y_A 30 IVEHKPAVAVIALR-EGRMLFVRQMRPA-VGLAPLEIP-AGLIEPGED---------PLEAARRELAEQTGL-SG----- 91 (170)
T ss_dssp EEEECCEEEEEEEE-TTEEEEEECCBTT-TTBCCBBCS-EEECCTTCC---------HHHHHHHHHHHHHSE-EE-----
T ss_pred EEecCCeEEEEEEE-CCEEEEEEEEeCC-CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCC-Cc-----
Confidence 45565 88889999 8999998876544 578999998 999999999 799999999999999 64
Q ss_pred ceeeeeEE
Q 027372 198 EFTPLGRI 205 (224)
Q Consensus 198 ~l~~lgri 205 (224)
.+.+++.+
T Consensus 92 ~~~~l~~~ 99 (170)
T 1v8y_A 92 DLTYLFSY 99 (170)
T ss_dssp EEEEEEEE
T ss_pred CceeeEEE
Confidence 34556655
No 40
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.34 E-value=7.3e-13 Score=103.21 Aligned_cols=55 Identities=20% Similarity=0.352 Sum_probs=46.8
Q ss_pred EEEEEEE---eCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 124 AFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 124 a~sv~lf---n~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
++.|+++ +.++++||+||.. +|.|.+| |||+++||+ +.+||+||++|||||.+..
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~ 64 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTD-----ADVWQFV-AGGGEDEEA---------ISETAKRESIEELNLDVDV 64 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESS-----SSCEECE-EEECCTTCC---------HHHHHHHHHHHHHTCCSCC
T ss_pred EEEEEEEEecCCCeEEEEEEEcC-----CCCEeCC-ccccCCCCC---------HHHHHHHHHHHHhCCCccc
Confidence 3445555 5678999999976 3999999 999999999 7999999999999999864
No 41
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.34 E-value=1.8e-12 Score=106.81 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=53.1
Q ss_pred CCeeEEEEEEEEEeCCC-eEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC
Q 027372 118 LNLLHRAFSVFLFNSKY-ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC 190 (224)
Q Consensus 118 ~gllHra~sv~lfn~~g-~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~ 190 (224)
....|.+++++|++.+| ++||+||. .+|.|.+| |||++.||+ +.+||+||++|||||.
T Consensus 41 ~~~~h~~~~~vv~~~~~~~vLL~~r~-----~~g~w~lP-gG~ve~gEs---------~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 41 NTIAHLTSSAFAVNKERNKFLMIHHN-----IYNSWAWT-GGHSDNEKD---------QLKVAIKELKEETGVK 99 (197)
T ss_dssp CSSEEEEEEEEEECTTSCEEEEEEET-----TTTEEECE-EEECTTCCB---------HHHHHHHHHHHHHCCS
T ss_pred CCCccEEEEEEEEECCCCEEEEEEec-----CCCCEECC-ccccCCCCC---------HHHHHHHHHHHHHCCC
Confidence 35799999999999886 99999986 46899999 999999999 7999999999999998
No 42
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.33 E-value=1.6e-12 Score=111.98 Aligned_cols=81 Identities=12% Similarity=0.141 Sum_probs=55.8
Q ss_pred cCCeeEEEEEEEEEeCCCeEEEEEecCCCC--CCCCceeecCCccCCCCCC--hhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 117 SLNLLHRAFSVFLFNSKYELLLQQRSGTKV--TFPLVWTNTCCSHPLYRES--ELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 117 ~~gllHra~sv~lfn~~g~lLLqqRs~~K~--tfPG~Wd~t~gGh~~~gEs--~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
..+.+|..+..+|++.+|++||+||...+. .++|.|.+..|||+++||+ +. | -+.+||+||++|||||.+.
T Consensus 62 ~d~~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~-E----tleeAa~REl~EEtGl~v~ 136 (211)
T 3e57_A 62 YDETTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPR-E----AFLKGLEREVNEEVDVSLR 136 (211)
T ss_dssp TCTTEEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHH-H----HHHHHHHHHHHHHEEEEEE
T ss_pred cCCcccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCch-h----hHHHHHHHHHHHHhCCeee
Confidence 457788877777777789999999988763 4789999944999999998 20 1 1589999999999999764
Q ss_pred CCCCCceeeeeEEEE
Q 027372 193 DVPVDEFTPLGRILY 207 (224)
Q Consensus 193 ~v~~~~l~~lgri~Y 207 (224)
.+.++|.+.+
T Consensus 137 -----~~~~ig~~~~ 146 (211)
T 3e57_A 137 -----ELEFLGLINS 146 (211)
T ss_dssp -----EEEEEEEEEC
T ss_pred -----ccEEEEEEec
Confidence 3567776654
No 43
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.32 E-value=5.5e-12 Score=97.13 Aligned_cols=58 Identities=21% Similarity=0.155 Sum_probs=49.1
Q ss_pred eEEEEEEEEEe--CCCe--EEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 121 LHRAFSVFLFN--SKYE--LLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 121 lHra~sv~lfn--~~g~--lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
.+.++.++|++ .+|+ +||+||... |+.|.+| ||+++.||+ +.+||+||+.|||||.+.
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~ 69 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYP----PVGLALP-GGFVEVGER---------VEEAAAREMREETGLEVR 69 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCE
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECc-cccCCCCCC---------HHHHHHHHHHHHHCCCcc
Confidence 45566777776 7888 999999753 5669998 999999999 799999999999999875
No 44
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.30 E-value=4.4e-12 Score=105.75 Aligned_cols=69 Identities=23% Similarity=0.170 Sum_probs=54.8
Q ss_pred CeeEEEEEEEE-EeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 027372 119 NLLHRAFSVFL-FNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (224)
Q Consensus 119 gllHra~sv~l-fn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~ 197 (224)
+..++++.+++ .+.+|++||+||.. .||.|.+| ||+++.||+ +.+||+||++|||||.+..
T Consensus 38 ~~~~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEt---------~~eaa~REl~EEtGl~~~~---- 99 (194)
T 2fvv_A 38 GYKKRAACLCFRSESEEEVLLVSSSR----HPDRWIVP-GGGMEPEEE---------PSVAAVREVCEEAGVKGTL---- 99 (194)
T ss_dssp SCEEEEEEEEESSTTCCEEEEEECSS----CTTSEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEE----
T ss_pred CccccEEEEEEEECCCCEEEEEEEeC----CCCcEECC-CCcCCCCcC---------HHHHHHHHHHHHhCCcccc----
Confidence 56677766655 24578999999874 47999999 999999999 7999999999999998753
Q ss_pred ceeeeeEEE
Q 027372 198 EFTPLGRIL 206 (224)
Q Consensus 198 ~l~~lgri~ 206 (224)
+.+++.+.
T Consensus 100 -~~~l~~~~ 107 (194)
T 2fvv_A 100 -GRLVGIFE 107 (194)
T ss_dssp -EEEEEEEE
T ss_pred -ceEEEEEE
Confidence 34555554
No 45
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.30 E-value=7.7e-12 Score=99.70 Aligned_cols=59 Identities=17% Similarity=0.267 Sum_probs=50.8
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
..++.++.++|++ +|++||+||... +|.|.++ ||+++.||+ +.+||+||++|||||.+.
T Consensus 20 ~~~~~~v~~ii~~-~~~vLL~~r~~~----~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~ 78 (171)
T 3id9_A 20 NIMQVRVTGILIE-DEKVLLVKQKVA----NRDWSLP-GGRVENGET---------LEEAMIREMREETGLEVK 78 (171)
T ss_dssp --CEEEEEEEEEE-TTEEEEEECSST----TCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCEE
T ss_pred CceEEEEEEEEEE-CCEEEEEEEECC----CCeEECC-CccCCCCCC---------HHHHHHHHHHHHHCCccc
Confidence 5677778888887 589999999863 7999999 999999999 799999999999999975
No 46
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.28 E-value=1.8e-12 Score=104.82 Aligned_cols=60 Identities=23% Similarity=0.153 Sum_probs=52.8
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 123 ra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
.++.+++++.+|++||+||.... .++|.|++| ||++++||+ +.+||+||+.||||+.+..
T Consensus 42 ~~v~v~i~~~~~~vLL~~r~~~~-~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~ 101 (182)
T 2yvp_A 42 AASFVLPVTERGTALLVRQYRHP-TGKFLLEVP-AGKVDEGET---------PEAAARRELREEVGAEAET 101 (182)
T ss_dssp EEEEEEEBCTTSEEEEEEEEEGG-GTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCEECSC
T ss_pred CEEEEEEEcCCCEEEEEEeccCC-CCCcEEEec-cccCCCCcC---------HHHHHHHHHHHHhCCCccc
Confidence 47888899999999999987643 478999999 999999999 7999999999999998753
No 47
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.28 E-value=3.3e-12 Score=98.95 Aligned_cols=56 Identities=20% Similarity=0.255 Sum_probs=48.9
Q ss_pred EEEEEEEEeCC-CeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 123 RAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 123 ra~sv~lfn~~-g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
+++.++|++.+ |++||+||.. +|+|.+| |||++.||+ +.+||+||+.||||+.+..
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gEs---------~~~aa~RE~~EEtGl~~~~ 61 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-----SDSWSFP-RGKISKDEN---------DIDCCIREVKEEIGFDLTD 61 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-----SSCCBCC-EECCCSSSC---------HHHHHHHHHHHHTSCCCSS
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-----CCcEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCchH
Confidence 35677888876 8999999863 6899998 999999999 7999999999999999864
No 48
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.27 E-value=3.8e-12 Score=100.74 Aligned_cols=55 Identities=24% Similarity=0.237 Sum_probs=48.6
Q ss_pred EEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 124 AFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 124 a~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
++.++|++ +|++||+||.. +|+|.+| ||++++||+ +.+||+||++||||+.+...
T Consensus 3 ~~~~vi~~-~~~vLL~~r~~-----~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~ 57 (156)
T 1k2e_A 3 VTSGVLVE-NGKVLLVKHKR-----LGVYIYP-GGHVEHNET---------PIEAVKREFEEETGIVVEPI 57 (156)
T ss_dssp EEEEECEE-TTEEEEEECTT-----TCSEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEEC
T ss_pred EEEEEEEE-CCEEEEEEEcC-----CCcEECC-eeecCCCCC---------HHHHHHHHHHHHHCCcceec
Confidence 56778888 89999999864 6899999 999999999 79999999999999998653
No 49
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.27 E-value=6.2e-12 Score=98.56 Aligned_cols=59 Identities=22% Similarity=0.165 Sum_probs=47.7
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 123 ra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
.++.+++++.+|++||.+|.... ..+++|.+| ||++++||+ +.+||+||++||||+.+.
T Consensus 6 ~~v~vi~~~~~~~vLLv~~~r~~-~~~~~w~~P-gG~ve~gEt---------~~~aa~REl~EEtGl~~~ 64 (145)
T 2w4e_A 6 RAVFILPVTAQGEAVLIRQFRYP-LRATITEIV-AGGVEKGED---------LGAAAARELLEEVGGAAS 64 (145)
T ss_dssp EEEEEEEEETTSEEEEEEEEETT-TTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCEECS
T ss_pred CEEEEEEEcCCCEEEEEEEEecC-CCCCEEEeC-CccCCCCCC---------HHHHHHHHHHHhhCCccC
Confidence 47788899999998764432211 245799999 999999999 799999999999999875
No 50
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.26 E-value=8.5e-12 Score=106.45 Aligned_cols=62 Identities=23% Similarity=0.228 Sum_probs=53.6
Q ss_pred CeeEEEEEEEEE---eCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 119 NLLHRAFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 119 gllHra~sv~lf---n~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
...+.++.++|+ +.++++||+||... .++|.|.+| |||+++||+ +.+||+|||.|||||.+.
T Consensus 10 ~~p~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lP-GG~ve~gEs---------~~~Aa~REl~EEtGl~~~ 74 (226)
T 2fb1_A 10 PTFYLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLM-GGFVQKDES---------VDDAAKRVLAELTGLENV 74 (226)
T ss_dssp CCEEEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECE-EEECCTTSC---------HHHHHHHHHHHHHCCCSC
T ss_pred CCCeEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECC-eeccCCCCC---------HHHHHHHHHHHHHCCCCC
Confidence 346778888888 55689999999864 578999999 999999999 799999999999999875
No 51
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.26 E-value=6.9e-12 Score=104.69 Aligned_cols=56 Identities=13% Similarity=0.192 Sum_probs=47.4
Q ss_pred eEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 121 lHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
.+.++.++|++ +|++||+||.. +|.|.+| ||++++||+ +.+||+||++||||+.+.
T Consensus 67 ~~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~v~ 122 (205)
T 3q1p_A 67 PKVDIRAVVFQ-NEKLLFVKEKS-----DGKWALP-GGWADVGYT---------PTEVAAKEVFEETGYEVD 122 (205)
T ss_dssp CEEEEEEEEEE-TTEEEEEEC--------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEE
T ss_pred CcceEEEEEEE-CCEEEEEEEcC-----CCcEECC-cCccCCCCC---------HHHHHHHHHHHHHCCccc
Confidence 34567778887 78999999873 7899999 999999999 799999999999999875
No 52
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.24 E-value=2.4e-11 Score=100.49 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=48.7
Q ss_pred EEEEEEEEeC-CCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 123 RAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 123 ra~sv~lfn~-~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
.++.+++++. ++++||+||.. .++|.|.++ ||+++.||+ +.+||+||++|||||.+.
T Consensus 27 v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lP-GG~ve~gEs---------~~~aA~REl~EEtGl~~~ 84 (199)
T 3h95_A 27 VGVAGAVFDESTRKILVVQDRN---KLKNMWKFP-GGLSEPEED---------IGDTAVREVFEETGIKSE 84 (199)
T ss_dssp CEEEEEEEETTTTEEEEEEESS---SSTTSBBCC-EEECCTTCC---------HHHHHHHHHHHHHCCCEE
T ss_pred ceEEEEEEeCCCCEEEEEEEcC---CCCCCEECC-ccccCCCCC---------HHHHHHHHHHHHhCCccc
Confidence 3556677775 48999999865 368999999 999999999 799999999999999975
No 53
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.23 E-value=3.4e-11 Score=98.79 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=50.7
Q ss_pred EEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 122 Hra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
..++.+++++ +|+|||+||...+ .+|+|.++ ||+++.||+ +.+||+||++|||||.+.
T Consensus 40 ~~~v~~ii~~-~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~ 97 (189)
T 3cng_A 40 KVIVGCIPEW-ENKVLLCKRAIAP--YRGKWTLP-AGFMENNET---------LVQGAARETLEEANARVE 97 (189)
T ss_dssp EEEEEEEEEE-TTEEEEEEESSSS--STTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEE
T ss_pred ceEEEEEEEe-CCEEEEEEccCCC--CCCeEECc-eeeccCCCC---------HHHHHHHHHHHHHCCccc
Confidence 3467777777 7899999998754 48999999 999999999 799999999999999875
No 54
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.23 E-value=2.1e-11 Score=104.97 Aligned_cols=72 Identities=21% Similarity=0.245 Sum_probs=57.0
Q ss_pred eEEEEEEEEE---eCCCeEEEEEecCCCCCCCCceeecCCccCCC--CCChhhhhhhhcHHHHHHHHHHHHhCCCccCCC
Q 027372 121 LHRAFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY--RESELIEENALGVRNAAQRKLLDELGICAEDVP 195 (224)
Q Consensus 121 lHra~sv~lf---n~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~--gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~ 195 (224)
.+.++.++|+ +.+++|||.||.. ..++|.|.+| |||+++ ||+ +.+||+|||.|||||.+..
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~lP-GG~ve~~~gEs---------~~~AA~REl~EEtGl~~~~-- 86 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWGLP-GGFIDETCDES---------LEQTVLRKLAEKTAVVPPY-- 86 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCS--SSSTTCEECS-EEECCTTTCSB---------HHHHHHHHHHHHHSSCCSE--
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcC--CCCCCCEECC-ccccCCCCCcC---------HHHHHHHHHHHHHCCCCCc--
Confidence 4556677776 4456999999984 3579999999 999999 999 7999999999999998742
Q ss_pred CCceeeeeEEEEEc
Q 027372 196 VDEFTPLGRILYKA 209 (224)
Q Consensus 196 ~~~l~~lgri~Y~a 209 (224)
+..++.+.+..
T Consensus 87 ---~~~l~~~~~~~ 97 (240)
T 3gz5_A 87 ---IEQLCTVGNNS 97 (240)
T ss_dssp ---EEEEEEEEESS
T ss_pred ---eeeEEEeCCCc
Confidence 45666665543
No 55
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.23 E-value=1.5e-11 Score=99.67 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=43.5
Q ss_pred eEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 121 lHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
+..++.+++. .+|++||.||. +|.|.+| ||+++.||+ +.+||+||+.|||||.+..
T Consensus 15 ~~~~~~~ii~-~~~~vLL~~r~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~ 70 (163)
T 3f13_A 15 LARRATAIIE-MPDGVLVTASR------GGRYNLP-GGKANRGEL---------RSQALIREIREETGLRINS 70 (163)
T ss_dssp CEEEEEEECE-ETTEEEEEECC---------BBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCE
T ss_pred ceEEEEEEEE-eCCEEEEEEEC------CCeEECC-ceeCCCCCC---------HHHHHHHHHHHHHCcccce
Confidence 3445555554 56788888885 5899999 999999999 7999999999999999754
No 56
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.23 E-value=6.2e-12 Score=106.02 Aligned_cols=66 Identities=23% Similarity=0.174 Sum_probs=52.0
Q ss_pred EEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEE
Q 027372 129 LFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILY 207 (224)
Q Consensus 129 lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gE-s~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y 207 (224)
+++.++++||+|| ++|+|.+| ||++++|| + +.+||+||+.||||+.+..+.+..+.+++.+.+
T Consensus 51 i~~~~~~vLl~~r------~~g~w~~P-GG~ve~gE~t---------~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~ 114 (212)
T 1u20_A 51 RVPIRRVLLMMMR------FDGRLGFP-GGFVDTRDIS---------LEEGLKRELEEELGPALATVEVTEDDYRSSQVR 114 (212)
T ss_dssp TEECCEEEEEEEE------TTSCEECS-EEEECTTTSC---------HHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEE
T ss_pred EEecCCEEEEEEe------CCCeEECC-CcccCCCCCC---------HHHHHHHHHHHHHCCCccccceeeeeEEEeccc
Confidence 4466789999999 48999999 99999999 9 799999999999999987543223345666655
Q ss_pred Ecc
Q 027372 208 KAP 210 (224)
Q Consensus 208 ~a~ 210 (224)
..+
T Consensus 115 ~~~ 117 (212)
T 1u20_A 115 EHP 117 (212)
T ss_dssp CTT
T ss_pred cCC
Confidence 443
No 57
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.22 E-value=1.5e-11 Score=102.72 Aligned_cols=55 Identities=18% Similarity=0.264 Sum_probs=48.4
Q ss_pred EEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 122 Hra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
+.++.++|+++ |+|||+||. +|.|.+| ||++++||+ +.+||+||++||+|+.+..
T Consensus 70 ~~~v~~vv~~~-~~vLLvrr~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~ 124 (206)
T 3o8s_A 70 KLDTRAAIFQE-DKILLVQEN------DGLWSLP-GGWCDVDQS---------VKDNVVKEVKEEAGLDVEA 124 (206)
T ss_dssp EEEEEEEEEET-TEEEEEECT------TSCEECS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEE
T ss_pred CccEEEEEEEC-CEEEEEEec------CCeEECC-eeccCCCCC---------HHHHHHHHHHHHHCCccee
Confidence 45677788874 899999997 6899999 999999999 7999999999999998753
No 58
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.20 E-value=2.2e-11 Score=101.59 Aligned_cols=67 Identities=15% Similarity=0.153 Sum_probs=55.5
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCC-CCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceee
Q 027372 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPL-YRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (224)
Q Consensus 123 ra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~-~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~ 201 (224)
.++.+++++.+|++||.||.... .++|+|.++ ||+++ .||+ +.+||+||+.|||||.+.. +.+
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~-~~~~~w~lP-gG~ve~~gEs---------~~~aa~REl~EEtGl~~~~-----~~~ 107 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHT-YGRRLWELP-AGLLDVAGEP---------PHLTAARELREEVGLQAST-----WQV 107 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETT-TTEEEEECC-EEECCSTTCC---------HHHHHHHHHHHHHCEEEEE-----EEE
T ss_pred CEEEEEEEcCCCEEEEEEeecCC-CCCcEEEeC-CccccCCCCC---------HHHHHHHHHHHHHCCcccc-----cEE
Confidence 47788889999999998877544 468999998 99999 9999 7999999999999998753 345
Q ss_pred eeEE
Q 027372 202 LGRI 205 (224)
Q Consensus 202 lgri 205 (224)
++.+
T Consensus 108 l~~~ 111 (207)
T 1mk1_A 108 LVDL 111 (207)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 59
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.17 E-value=5.9e-11 Score=99.65 Aligned_cols=68 Identities=24% Similarity=0.290 Sum_probs=52.7
Q ss_pred EEEEEEEEe-CCCeEEE--EEecCCCCC--CCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 027372 123 RAFSVFLFN-SKYELLL--QQRSGTKVT--FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (224)
Q Consensus 123 ra~sv~lfn-~~g~lLL--qqRs~~K~t--fPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~ 197 (224)
.++.|++++ .+|++|| |.|...+.. .++.|.+| ||++++||+ +.+||+|||+||||+.+.
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welP-gG~ve~gE~---------~~~aA~REl~EEtGl~~~----- 122 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV-AGMIEEGES---------VEDVARREAIEEAGLIVK----- 122 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCC-----
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeC-cccCCCCcC---------HHHHHHHHHHHHcCcccC-----
Confidence 478888898 5789888 445543221 25789998 999999999 799999999999999875
Q ss_pred ceeeeeEE
Q 027372 198 EFTPLGRI 205 (224)
Q Consensus 198 ~l~~lgri 205 (224)
.+.+++.+
T Consensus 123 ~~~~l~~~ 130 (209)
T 1g0s_A 123 RTKPVLSF 130 (209)
T ss_dssp CEEEEEEE
T ss_pred cEEEeEEE
Confidence 34566655
No 60
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.14 E-value=3.9e-11 Score=94.38 Aligned_cols=55 Identities=20% Similarity=0.185 Sum_probs=45.8
Q ss_pred EEEEeC---CCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHH-HHHHHHHHHHhC-CCcc
Q 027372 127 VFLFNS---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVR-NAAQRKLLDELG-ICAE 192 (224)
Q Consensus 127 v~lfn~---~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~-~AA~REL~EElG-I~~~ 192 (224)
++|.+. +|++||+||.... .++|+|++| ||+++.||+ +. +||+||+.||+| +.+.
T Consensus 24 ~vi~~~~~~~~~vLl~~R~~~~-~~~g~w~~P-gG~~e~gE~---------~~~~a~~REl~EE~g~l~~~ 83 (155)
T 1x51_A 24 CVLEQPGALGAQILLVQRPNSG-LLAGLWEFP-SVTWEPSEQ---------LQRKALLQELQRWAGPLPAT 83 (155)
T ss_dssp EEEEEECSSSEEEEEEECCCCS-TTCSCEECC-EEECCSSHH---------HHHHHHHHHHHHHSCCCCST
T ss_pred EEEEecCCCCCEEEEEECCCCC-CCCceecCC-ccccCCCCC---------HHHHHHHHHHHHHhCCccee
Confidence 344454 5899999998754 589999999 999999999 65 999999999999 7654
No 61
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.14 E-value=8.7e-11 Score=97.85 Aligned_cols=66 Identities=26% Similarity=0.201 Sum_probs=52.7
Q ss_pred EEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeee
Q 027372 124 AFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLG 203 (224)
Q Consensus 124 a~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lg 203 (224)
++.|++++++ ++||.+|.... ..+|.|++| ||++++||+ +.+||+|||+||||+.+.. +.+++
T Consensus 51 av~vl~~~~~-~vLLvrq~r~~-~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~-----~~~l~ 113 (198)
T 1vhz_A 51 AVMIVPIVDD-HLILIREYAVG-TESYELGFS-KGLIDPGES---------VYEAANRELKEEVGFGAND-----LTFLK 113 (198)
T ss_dssp EEEEEEEETT-EEEEEEEEETT-TTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEEEE
T ss_pred EEEEEEEECC-EEEEEEcccCC-CCCcEEEeC-cccCCCCcC---------HHHHHHHHHHHHHCCCcCc-----eEEEE
Confidence 6777778876 99888765432 468899998 999999999 7999999999999998753 45565
Q ss_pred EEE
Q 027372 204 RIL 206 (224)
Q Consensus 204 ri~ 206 (224)
.+.
T Consensus 114 ~~~ 116 (198)
T 1vhz_A 114 KLS 116 (198)
T ss_dssp EEE
T ss_pred EEe
Confidence 553
No 62
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.13 E-value=1e-10 Score=103.52 Aligned_cols=61 Identities=16% Similarity=0.191 Sum_probs=53.4
Q ss_pred CeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 119 gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
...|.++.++|+ .+|++||+||...+ ++|+|.++ ||++++||+ +.+||+||++|||||.+.
T Consensus 205 ~~~~~~v~~vv~-~~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~v~ 265 (352)
T 2qjt_B 205 KPNFVTVDALVI-VNDHILMVQRKAHP--GKDLWALP-GGFLECDET---------IAQAIIRELFEETNINLT 265 (352)
T ss_dssp CCEEEEEEEEEE-ETTEEEEEEESSSS--STTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSCC
T ss_pred CCCceEEEEEEE-ECCEEEEEEEcCCC--CCCeEECC-CCcCCCCCC---------HHHHHHHHHHHhhCCCcc
Confidence 356788888888 57899999998753 58999998 999999999 799999999999999976
No 63
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.10 E-value=1.7e-10 Score=101.90 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=51.0
Q ss_pred EEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEE
Q 027372 128 FLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILY 207 (224)
Q Consensus 128 ~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y 207 (224)
++++.+|++||+||...+ +|+|+++ ||+++.||+ +++||+||+.||+||.+.. +.+++.+.+
T Consensus 145 v~v~~~~~vLL~rr~~~~---~g~w~lP-gG~vE~GEt---------~eeAa~REv~EEtGl~v~~-----~~~~~~~~~ 206 (269)
T 1vk6_A 145 VAIRRDDSILLAQHTRHR---NGVHTVL-AGFVEVGET---------LEQAVAREVMEESGIKVKN-----LRYVTSQPW 206 (269)
T ss_dssp EEEEETTEEEEEEETTTC---SSCCBCE-EEECCTTCC---------HHHHHHHHHHHHHCCEEEE-----EEEEEEEEE
T ss_pred EEEEeCCEEEEEEecCCC---CCcEECC-cCcCCCCCC---------HHHHHHHHHHHHhCceeee-----EEEEEEEec
Confidence 344557899999998653 6999998 999999999 7999999999999998753 456665544
Q ss_pred E
Q 027372 208 K 208 (224)
Q Consensus 208 ~ 208 (224)
.
T Consensus 207 ~ 207 (269)
T 1vk6_A 207 P 207 (269)
T ss_dssp E
T ss_pred C
Confidence 3
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.10 E-value=1.3e-10 Score=102.06 Aligned_cols=61 Identities=10% Similarity=-0.024 Sum_probs=52.7
Q ss_pred eeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 120 LLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 120 llHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
..+.++.+++++ +|++||+||... .++|+|.++ ||++++||+ +.+||+||++||||+.+..
T Consensus 201 ~~~~~v~~vi~~-~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~ 261 (341)
T 2qjo_A 201 PTFITTDAVVVQ-AGHVLMVRRQAK--PGLGLIALP-GGFIKQNET---------LVEGMLRELKEETRLKVPL 261 (341)
T ss_dssp CCEEEEEEEEEE-TTEEEEEECCSS--SSTTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSSCH
T ss_pred CCceEEEEEEEe-CCEEEEEEecCC--CCCCeEECC-CCcCCCCCC---------HHHHHHHHHhhhhCCcccc
Confidence 457788888884 789999999764 358999998 999999999 7999999999999999763
No 65
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.09 E-value=1.3e-10 Score=102.28 Aligned_cols=58 Identities=14% Similarity=0.077 Sum_probs=50.1
Q ss_pred EEEEEEEEeC-CCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 123 RAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 123 ra~sv~lfn~-~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
.++.++|+++ +|++||+||.. .||.|.++ |||+++||+ +.+||+||+.|||||.+..+
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEs---------~~eAA~REl~EEtGl~~~~l 160 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWK----ASSGWGFP-KGKIDKDES---------DVDCAIREVYEETGFDCSSR 160 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESS----TTCCCBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCTTT
T ss_pred CeEEEEEEECCCCEEEEEEEeC----CCCeEECC-cccCCCCcC---------HHHHHHHHHHHHhCCCceee
Confidence 4567888886 48999999965 37999999 999999999 79999999999999998753
No 66
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.08 E-value=2.8e-10 Score=99.69 Aligned_cols=60 Identities=22% Similarity=0.321 Sum_probs=49.1
Q ss_pred eEEEEEEEEEe--C---CCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 121 LHRAFSVFLFN--S---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 121 lHra~sv~lfn--~---~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
.+.++.++|+. . +++|||++|... .++|.|.++ ||++++||+ +.+||+|||.|||||.+.
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lP-GG~ve~gEs---------~~~AA~REl~EEtGl~v~ 102 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALP-GGFVNRNES---------TEDSVLRETKEETGVVIS 102 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECC-EEECCTTSC---------HHHHHHHHHHHHHCCCCC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECC-ccCCCCCcC---------HHHHHHHHHHHHHCCCCC
Confidence 34556666654 2 348999999875 478999999 999999999 799999999999998764
No 67
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.06 E-value=1.2e-10 Score=96.21 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=52.1
Q ss_pred eEEEEEEEEEeC-CCeEEEEEecCCC----CC-CCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 027372 121 LHRAFSVFLFNS-KYELLLQQRSGTK----VT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (224)
Q Consensus 121 lHra~sv~lfn~-~g~lLLqqRs~~K----~t-fPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v 194 (224)
.|.++.++++++ +|++||.++.... .. .++.|.+| ||+++ ||+ +.+||+||+.||||+.+.
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~---------~~~aa~REl~EEtG~~~~-- 110 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDE---------PEVCIRKEAIEETGYEVG-- 110 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSC---------HHHHHHHHHHHHC-CCCS--
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCC---------HHHHHHHHHHHHhCCccC--
Confidence 345788888985 5898887654311 11 57899999 99999 999 799999999999999975
Q ss_pred CCCceeeeeEE
Q 027372 195 PVDEFTPLGRI 205 (224)
Q Consensus 195 ~~~~l~~lgri 205 (224)
.+.+++.+
T Consensus 111 ---~~~~l~~~ 118 (191)
T 3o6z_A 111 ---EVRKLFEL 118 (191)
T ss_dssp ---CEEEEEEE
T ss_pred ---cEEEEEEE
Confidence 34566654
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.02 E-value=4e-10 Score=102.69 Aligned_cols=60 Identities=12% Similarity=0.146 Sum_probs=51.6
Q ss_pred EEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 122 Hra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
..++.++|+|.+|++||+||...+ .++|+|++| ||+++.| + +.+|++||+.||+||.+..
T Consensus 240 ~~~~~~vi~~~~g~vLL~rR~~~g-~~~GlWefP-GG~ve~g-t---------~~~al~REl~EE~Gl~v~~ 299 (369)
T 3fsp_A 240 VPLAVAVLADDEGRVLIRKRDSTG-LLANLWEFP-SCETDGA-D---------GKEKLEQMVGEQYGLQVEL 299 (369)
T ss_dssp EEEEEEEEECSSSEEEEEECCSSS-TTTTCEECC-EEECSSS-C---------THHHHHHHHTTSSSCCEEE
T ss_pred EEEEEEEEEeCCCEEEEEECCCCC-CcCCcccCC-CcccCCC-C---------cHHHHHHHHHHHhCCceee
Confidence 345556677889999999998755 499999999 9999999 8 5899999999999999864
No 69
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.97 E-value=3.7e-10 Score=96.70 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=53.3
Q ss_pred eEEEEcCCCcEEEEEecccccchhhcccCCeeEEEEEEEEEeC-CCeEEEEE--ecCCC---------------------
Q 027372 90 ECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNS-KYELLLQQ--RSGTK--------------------- 145 (224)
Q Consensus 90 ~~~vvD~~d~~iG~~~R~~~Hl~~~i~~~gllHra~sv~lfn~-~g~lLLqq--Rs~~K--------------------- 145 (224)
.+.+.+.||+.. .|.. + ..|.+|.|+++|. ++++||.| |..-.
T Consensus 17 ~~~~~~~~G~~~---~~e~------v----~~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (218)
T 3q91_A 17 NLYFQSMNGAQK---SWDF------M----KTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPR 83 (218)
T ss_dssp -------------------------------CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC----------------
T ss_pred EEEEECCCCCEE---EEEE------E----EcCCeEEEEEEECCCCEEEEEEcccccccccccccccccccccccccccc
Confidence 456667777642 3322 1 1267899999994 57888754 42210
Q ss_pred -------CCCCCceeecCCccCCC-CCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEE
Q 027372 146 -------VTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRI 205 (224)
Q Consensus 146 -------~tfPG~Wd~t~gGh~~~-gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri 205 (224)
...++.|+++ ||++++ ||+ +.+||+|||+||||+.+. ...+.+++.+
T Consensus 84 ~~~~~~~~~~~~~welP-gG~ve~~gEs---------~~eaA~REl~EEtGl~~~---~~~l~~l~~~ 138 (218)
T 3q91_A 84 ELQPALPGSAGVTVELC-AGLVDQPGLS---------LEEVACKEAWEECGYHLA---PSDLRRVATY 138 (218)
T ss_dssp ---------CCEEEECE-EEECCSSSCC---------HHHHHHHHHHHHHCBCCC---GGGCEEEEEE
T ss_pred ccccccccCCCeEEECC-cceeCCCCCC---------HHHHHHHHHHHHhCCccc---cCceEEEEEE
Confidence 1126799999 999999 999 799999999999999973 1345666664
No 70
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.97 E-value=7.9e-10 Score=99.62 Aligned_cols=63 Identities=21% Similarity=0.172 Sum_probs=46.2
Q ss_pred eCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCceeeeeEEEEEcc
Q 027372 131 NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAP 210 (224)
Q Consensus 131 n~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~v~~~~l~~lgri~Y~a~ 210 (224)
+.+.++||.||.. .|.|.+| ||++++||+ +.+||+||++|||||.+.. ..+++.+.|..+
T Consensus 35 ~~~~~vLLv~r~~-----~g~W~lP-gG~ve~gEs---------~~~AA~REl~EEtGl~~~~-----~~~l~~~~~~~~ 94 (364)
T 3fjy_A 35 LDSIEVCIVHRPK-----YDDWSWP-KGKLEQNET---------HRHAAVREIGEETGSPVKL-----GPYLCEVEYPLS 94 (364)
T ss_dssp HTTEEEEEEEETT-----TTEEECC-EEECCTTCC---------HHHHHHHHHHHHHSCCEEE-----EEEEEEEC----
T ss_pred CCceEEEEEEcCC-----CCCEECC-cCCCCCCCC---------HHHHHHHHHHHHhCCeeee-----ccccceEEEecc
Confidence 3445899999843 3899999 999999999 7999999999999998753 346676666665
Q ss_pred cCC
Q 027372 211 SDG 213 (224)
Q Consensus 211 ~~~ 213 (224)
.++
T Consensus 95 ~~g 97 (364)
T 3fjy_A 95 EEG 97 (364)
T ss_dssp ---
T ss_pred CCC
Confidence 443
No 71
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.94 E-value=6.6e-10 Score=96.43 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=53.4
Q ss_pred eeEEEEEEEEEeC-CC--eEEEEEecCCCCCCCCceeecCCccCCCCCChh-----------hhhhhhcHHHHHHHHHHH
Q 027372 120 LLHRAFSVFLFNS-KY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----------IEENALGVRNAAQRKLLD 185 (224)
Q Consensus 120 llHra~sv~lfn~-~g--~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~-----------~~~~~~g~~~AA~REL~E 185 (224)
..+.++-+++.+. +| +|||+||+.....+||.|.++ ||+++++|+.. ..+....+..||+||++|
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~E 85 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAE 85 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHH
Confidence 3444444444443 34 899999999988889999999 99999988731 112233468999999999
Q ss_pred HhCCCcc
Q 027372 186 ELGICAE 192 (224)
Q Consensus 186 ElGI~~~ 192 (224)
|+||.+.
T Consensus 86 E~Gl~l~ 92 (232)
T 3qsj_A 86 EIGWLLA 92 (232)
T ss_dssp HHSCCCS
T ss_pred HhCceec
Confidence 9999864
No 72
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=98.81 E-value=2.3e-09 Score=89.58 Aligned_cols=58 Identities=17% Similarity=0.044 Sum_probs=43.4
Q ss_pred EEEEEEEE--eC--CCeEEEEE--ecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 123 RAFSVFLF--NS--KYELLLQQ--RSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 123 ra~sv~lf--n~--~g~lLLqq--Rs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
.++.|+.+ +. ++++||.+ |.. ..++.|.+| ||++++||+ +.+||+|||+||||+.+..
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~~---~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~ 125 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRPP---MGGYCIEFP-AGLIDDGET---------PEAAALRELEEETGYKGDI 125 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEGG---GTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCEE
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecCC---CCCcEEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccc
Confidence 35665543 32 24777755 432 246799998 999999999 7999999999999998753
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.76 E-value=1.8e-08 Score=89.37 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=38.2
Q ss_pred eEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCc
Q 027372 135 ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICA 191 (224)
Q Consensus 135 ~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~ 191 (224)
++||+||.. +|.|.++ |||+++||+ +.+||+|||.||||+.+
T Consensus 140 ~vLl~~r~~-----~g~W~lP-GG~Ve~GEs---------~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIP-GGMVDPGEK---------ISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEECTT-----TCSEECC-CEECCTTCC---------HHHHHHHHHHHHHSCGG
T ss_pred EEEEEEecC-----CCcEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCcc
Confidence 599999975 3899999 999999999 79999999999999984
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.74 E-value=9.3e-09 Score=87.67 Aligned_cols=44 Identities=25% Similarity=0.267 Sum_probs=38.8
Q ss_pred CeEEEEEecCCCCCCCCceeecCCccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 134 YELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 134 g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gE-s~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
+++||++|. +|.|.+| ||+++.|| + +.+||+||++||||+.+..
T Consensus 65 ~~~ll~~r~------~g~w~lP-GG~ve~gE~t---------~~eaa~REl~EEtGl~~~~ 109 (217)
T 2xsq_A 65 YAILMQMRF------DGRLGFP-GGFVDTQDRS---------LEDGLNRELREELGEAAAA 109 (217)
T ss_dssp EEEEEEEET------TSCEECS-EEECCTTCSS---------HHHHHHHHHHHHHCGGGGG
T ss_pred CcEEEEEcc------CCeEECC-ceecCCCCCC---------HHHHHHHHHHHHHCCCCcc
Confidence 357777774 7899999 99999999 8 7999999999999999874
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.43 E-value=1.1e-07 Score=82.01 Aligned_cols=69 Identities=22% Similarity=0.175 Sum_probs=47.9
Q ss_pred eEEEEEEEEEeCC-C----------eEEEEEecCCCCCCCCceeecCCccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhC
Q 027372 121 LHRAFSVFLFNSK-Y----------ELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELG 188 (224)
Q Consensus 121 lHra~sv~lfn~~-g----------~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gE-s~~~~~~~~g~~~AA~REL~EElG 188 (224)
|..+.++++.-++ + .+|+|.| |.|.|++| ||++++|| + +++|.+|||.||+|
T Consensus 20 ~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R------~~G~weFP-GGkVe~gE~t---------~e~aL~REl~EElg 83 (214)
T 3kvh_A 20 WSHSCHAMLYAANPGQLFGRIPMRFSVLMQMR------FDGLLGFP-GGFVDRRFWS---------LEDGLNRVLGLGLG 83 (214)
T ss_dssp CEEEEEEEEEEEEEEEETTTEEEEEEEEEEEE------TTSCEECS-EEEECTTTCC---------HHHHHHHSCCSCC-
T ss_pred ccEeeEEEEEcCCccccccccchhheEEEeee------eCCEEeCC-CccCCCCCCC---------HHHHHHHHHHHhhC
Confidence 5556677777543 2 3889998 56999999 99999999 7 79999999999999
Q ss_pred C-CccCCCCCceeeeeEEEEEcc
Q 027372 189 I-CAEDVPVDEFTPLGRILYKAP 210 (224)
Q Consensus 189 I-~~~~v~~~~l~~lgri~Y~a~ 210 (224)
+ .+. ...++..+.+.+|
T Consensus 84 ~~~V~-----~~~y~~s~~~~yp 101 (214)
T 3kvh_A 84 CLRLT-----EADYLSSHLTEGP 101 (214)
T ss_dssp --CCC-----GGGEEEEEEC---
T ss_pred Ceeee-----eeeeEEEEeccCC
Confidence 7 343 2234555544443
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.09 E-value=6.4e-06 Score=71.09 Aligned_cols=58 Identities=14% Similarity=0.109 Sum_probs=48.5
Q ss_pred cCCeeEEEEEEEEEeCCC--eEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC
Q 027372 117 SLNLLHRAFSVFLFNSKY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC 190 (224)
Q Consensus 117 ~~gllHra~sv~lfn~~g--~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~ 190 (224)
+.|+...+..|++.+..+ +|||-|+.. +.|.++ ||.+++||+ ..+|.+|||.||+|+.
T Consensus 54 ~~g~R~sV~avil~~~~~~phVLLlq~~~------~~f~LP-GGkle~gE~---------~~eaL~REL~EELg~~ 113 (208)
T 3bho_A 54 KIGMRRTVEGVLIVHEHRLPHVLLLQLGT------TFFKLP-GGELNPGED---------EVEGLKRLMTEILGRQ 113 (208)
T ss_dssp HHCSEEEEEEEEEEEETTEEEEEEEEEET------TEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCC
T ss_pred hhCCceEEEEEEEEcCCCCcEEEEEEcCC------CcEECC-CcccCCCCC---------HHHHHHHHHHHHhCCC
Confidence 458888888888887766 688777743 489999 999999999 5999999999999973
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=97.46 E-value=6.9e-05 Score=67.71 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=36.2
Q ss_pred EEEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHh-CCCccC
Q 027372 124 AFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDEL-GICAED 193 (224)
Q Consensus 124 a~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EEl-GI~~~~ 193 (224)
++++++. .+|+|||+ . -.| |.+| ||+++.+++ ++|+||++||+ |+.++.
T Consensus 185 ~vgaii~-~~g~vLL~----~---~~G-W~LP-G~~~~~~~~-----------~~a~RE~~EEttGl~v~~ 234 (321)
T 3rh7_A 185 RLGAVLE-QQGAVFLA----G---NET-LSLP-NCTVEGGDP-----------ARTLAAYLEQLTGLNVTI 234 (321)
T ss_dssp EEEEEEE-SSSCEEEB----C---SSE-EBCC-EEEESSSCH-----------HHHHHHHHHHHHSSCEEE
T ss_pred eEEEEEE-ECCEEEEe----e---CCC-ccCC-cccCCCChh-----------HHHHHHHHHHhcCCEEee
Confidence 3556665 46999998 1 248 9999 776544433 59999999997 999863
No 78
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=55.06 E-value=7.7 Score=32.09 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=33.5
Q ss_pred CeEEEEcCCCcEEEEEecccccchhhcccCCeeEEEEEEEEEeCCCeEEEEEecCCCCCCCCceeecCC
Q 027372 89 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCC 157 (224)
Q Consensus 89 E~~~vvD~~d~~iG~~~R~~~Hl~~~i~~~gllHra~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~g 157 (224)
..++|+|++|+.+..+.-+.+. +...+.|+|..|+.|+.-|... ..+-..|+..-+
T Consensus 52 ~~f~V~D~~G~~vf~V~~~~~~------------~~~~~~l~D~~G~~l~~i~rk~-~~~~~~~~v~~~ 107 (217)
T 1zxu_A 52 GNFVITDVNGNLLFKVKEPVFG------------LHDKRVLLDGSGTPVVTLREKM-VSMHDRWQVFRG 107 (217)
T ss_dssp CCEEEEETTSCEEEEEECSSTT------------CCSEEEEECTTSCEEEEEEC-------CEEEEEET
T ss_pred CCEEEEeCCCCEEEEEEccccC------------CCCEEEEECCCCCEEEEEEccc-cccCcEEEEEcC
Confidence 3789999999999987543211 1224567888888666554432 245567877533
No 79
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=41.31 E-value=24 Score=26.96 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=22.1
Q ss_pred cHHHHHhhhcCeEEEEcCCCcEEEEEecccc
Q 027372 79 DAVQRRLMFEDECILVDENDRVVGHENKYNC 109 (224)
Q Consensus 79 d~~q~~lm~eE~~~vvD~~d~~iG~~~R~~~ 109 (224)
.+.-..+.+...+.|||++|+++|..++..+
T Consensus 106 ~~~~~~m~~~~~lpVVd~~g~l~GiiT~~Di 136 (156)
T 3k6e_A 106 TEVLHKLVDESFLPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp HHHHHHTTTSSEEEEECTTSBEEEEEEHHHH
T ss_pred HHHHHHHHHcCCeEEEecCCEEEEEEEHHHH
Confidence 3444444444457899999999999998753
No 80
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=40.89 E-value=31 Score=25.51 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=22.1
Q ss_pred cHHHHHhhhcCeEEEEcCCCcEEEEEecccc
Q 027372 79 DAVQRRLMFEDECILVDENDRVVGHENKYNC 109 (224)
Q Consensus 79 d~~q~~lm~eE~~~vvD~~d~~iG~~~R~~~ 109 (224)
.+.-..+.....+.|+|++|+++|..++...
T Consensus 106 ~~a~~~~~~~~~lpVvd~~g~~~Giit~~di 136 (156)
T 3ctu_A 106 TEVLHKLVDESFLPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp HHHHHHTTTSSEEEEECTTSBEEEEEETTHH
T ss_pred HHHHHHHHHcCeEEEEcCCCeEEEEEEHHHH
Confidence 3443444444568899999999999988753
No 81
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=35.53 E-value=36 Score=24.87 Aligned_cols=31 Identities=10% Similarity=-0.021 Sum_probs=22.1
Q ss_pred ccHHHHHhhhcCeEEEEcCCCcEEEEEeccc
Q 027372 78 MDAVQRRLMFEDECILVDENDRVVGHENKYN 108 (224)
Q Consensus 78 ~d~~q~~lm~eE~~~vvD~~d~~iG~~~R~~ 108 (224)
+.+.-..+.....+.|+|++|+++|..++..
T Consensus 106 l~~a~~~~~~~~~l~Vvd~~g~~~Giit~~d 136 (150)
T 3lqn_A 106 FAKALEMTIDHPFICAVNEDGYFEGILTRRA 136 (150)
T ss_dssp HHHHHHHHHHCSEEEEECTTCBEEEEEEHHH
T ss_pred HHHHHHHHHhCCEEEEECCCCcEEEEEEHHH
Confidence 3344444444455889999999999998865
No 82
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=34.42 E-value=36 Score=25.27 Aligned_cols=32 Identities=3% Similarity=-0.116 Sum_probs=23.0
Q ss_pred cccHHHHHhhhcCeEEEEcCCCcEEEEEeccc
Q 027372 77 GMDAVQRRLMFEDECILVDENDRVVGHENKYN 108 (224)
Q Consensus 77 ~~d~~q~~lm~eE~~~vvD~~d~~iG~~~R~~ 108 (224)
.+.+....+.....+.|+|++|+++|..++..
T Consensus 104 ~l~~a~~~m~~~~~lpVvd~~g~~vGiit~~d 135 (159)
T 1yav_A 104 PIMKGFGMVINNGFVCVENDEQVFEGIFTRRV 135 (159)
T ss_dssp BHHHHHHHTTTCSEEEEECTTCBEEEEEEHHH
T ss_pred CHHHHHHHHHhCCEEEEEeCCCeEEEEEEHHH
Confidence 34455555555555888999999999998875
No 83
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=32.56 E-value=40 Score=24.75 Aligned_cols=31 Identities=3% Similarity=-0.007 Sum_probs=22.5
Q ss_pred ccHHHHHhhhcCeEEEEcCCCcEEEEEeccc
Q 027372 78 MDAVQRRLMFEDECILVDENDRVVGHENKYN 108 (224)
Q Consensus 78 ~d~~q~~lm~eE~~~vvD~~d~~iG~~~R~~ 108 (224)
+.+.-..+.....+.|+|++|+++|..++..
T Consensus 102 l~~a~~~m~~~~~l~Vvd~~g~~~Giit~~d 132 (157)
T 2emq_A 102 LMKAVGLIVNHPFVCVENDDGYFAGIFTRRE 132 (157)
T ss_dssp HHHHHHHHHHSSEEEEECSSSSEEEEEEHHH
T ss_pred HHHHHHHHhhCCEEEEEcCCCeEEEEEEHHH
Confidence 4445445554445889999999999998875
No 84
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=31.61 E-value=83 Score=26.43 Aligned_cols=52 Identities=12% Similarity=0.174 Sum_probs=30.7
Q ss_pred hcCeEEEEcCCCcEEEEE-ecccccchhhcccCCeeEEEEEEEEEeCCCeEEEEEe-cCCCCCCCCceee
Q 027372 87 FEDECILVDENDRVVGHE-NKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQR-SGTKVTFPLVWTN 154 (224)
Q Consensus 87 ~eE~~~vvD~~d~~iG~~-~R~~~Hl~~~i~~~gllHra~sv~lfn~~g~lLLqqR-s~~K~tfPG~Wd~ 154 (224)
..|.+.|+|++|+++|.. .....-.+..+ .+|.+.-.+| -....+||-+|.+
T Consensus 108 ~GD~V~V~~~~G~~IAvG~a~~sS~Ei~~~----------------~kG~aVkv~rVimd~~~Yp~~W~~ 161 (195)
T 3zv0_C 108 LYDEIVLITTKGEAIAVAIAQMSTVDLASC----------------DHGVVASVKRCIMERDLYPRRWGL 161 (195)
T ss_dssp TTCEEEEECTTCCEEEEEEESSCHHHHHHC----------------SSSEEEEEEEECBCTTSSCCCCSS
T ss_pred CCCEEEEEcCCCCEEEEEEEcCCHHHHhhc----------------CCcEEEEEEEEEeCCCCcCccccc
Confidence 357899999999998874 33332222222 2333322222 3455789999977
No 85
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=30.30 E-value=68 Score=29.68 Aligned_cols=58 Identities=7% Similarity=0.107 Sum_probs=35.1
Q ss_pred EEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC
Q 027372 125 FSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (224)
Q Consensus 125 ~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~~ 193 (224)
+-++|||.+|+++-..+...+..+|. .|.++..-.+ +-.....++|++.++.|+..++
T Consensus 16 ~Ka~l~d~~G~~va~~~~~~~~~~p~------~G~~Eqdp~~-----~w~~~~~~i~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 16 SRAVVMDHDANIISVSQREFEQIYPK------PGWVEHDPME-----IWATQSSTLVEVLAKADISSDQ 73 (526)
T ss_dssp EEEEEECTTCCEEEEEEEECCCBCSS------TTCCEECHHH-----HHHHHHHHHHHHHHHHTCCGGG
T ss_pred eeeeEEcCCCCEEEEEEEecCcccCC------CCcEEECHHH-----HHHHHHHHHHHHHHHcCCChhh
Confidence 34678999999886554444434442 3444432221 1224556789999999998764
No 86
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=26.26 E-value=89 Score=28.81 Aligned_cols=57 Identities=11% Similarity=-0.047 Sum_probs=34.7
Q ss_pred EEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 125 FSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 125 ~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
+-+.|+|.+|+++-..+......+|. .|..+.+..+ +......++|++.++.|++..
T Consensus 19 ~k~~l~d~~G~il~~~~~~~~~~~p~------~g~~e~dp~~-----~~~~i~~~i~~~~~~~~~~~~ 75 (508)
T 3ifr_A 19 TIAILVRLPDTVVAVASRPTTLSSPH------PGWAEEDPAQ-----WWDNARAVLAELKTTAGESDW 75 (508)
T ss_dssp EEEEEEETTTEEEEEEEEECCCBCSS------TTCCEECHHH-----HHHHHHHHHHHHHHHHCGGGC
T ss_pred eEEEEECCCCCEEEEEEEecceecCC------CCceEECHHH-----HHHHHHHHHHHHHHhcCCChh
Confidence 35678999999887655544433432 3444333222 223456678899988887754
No 87
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=25.34 E-value=92 Score=28.74 Aligned_cols=57 Identities=7% Similarity=0.103 Sum_probs=35.3
Q ss_pred EEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 125 FSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 125 ~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
+-+.|+|.+|+++-..+......+|. .|..+.+... +......++|++.++.|++..
T Consensus 15 ~k~~l~d~~G~il~~~~~~~~~~~p~------~g~~e~dp~~-----~~~~~~~~i~~~~~~~~~~~~ 71 (510)
T 2p3r_A 15 SRAVVMDHDANIISVSQREFEQIYPK------PGWVEHDPME-----IWATQSSTLVEVLAKADISSD 71 (510)
T ss_dssp EEEEEECTTCCEEEEEEEECCCBCSS------TTCCEECHHH-----HHHHHHHHHHHHHHHTTCCGG
T ss_pred eEEEEECCCCCEEEEEEEecccccCC------CCcEEECHHH-----HHHHHHHHHHHHHHHcCCChh
Confidence 35678899999887766555444552 3444433222 222455677888889888764
No 88
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=23.97 E-value=1.1e+02 Score=28.07 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=34.8
Q ss_pred EEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 125 FSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 125 ~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
+-+.|+|.+|+++-..+......+|. .|..+.+... +......++|++.++.|+...
T Consensus 17 ~k~~l~d~~G~il~~~~~~~~~~~p~------~g~~e~dp~~-----~~~~~~~~i~~~~~~~~~~~~ 73 (506)
T 3h3n_X 17 SRAIIFDRNGKKIGSSQKEFPQYFPK------SGWVEHNANE-----IWNSVQSVIAGAFIESGIRPE 73 (506)
T ss_dssp EEEEEEETTSCEEEEEEEECCCBCSS------TTCCEECHHH-----HHHHHHHHHHHHHHHHTCCGG
T ss_pred eEEEEECCCCCEEEEEEEecCccCCC------CCcEEECHHH-----HHHHHHHHHHHHHHHcCCChh
Confidence 35678999999887765554444442 3444433222 222455677888888888754
No 89
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=23.89 E-value=42 Score=18.64 Aligned_cols=14 Identities=7% Similarity=0.306 Sum_probs=11.4
Q ss_pred EEEEcCCCcEEEEE
Q 027372 91 CILVDENDRVVGHE 104 (224)
Q Consensus 91 ~~vvD~~d~~iG~~ 104 (224)
-.|||.||+++...
T Consensus 7 s~IYD~~g~~i~~l 20 (26)
T 2v2f_A 7 SKIYDNKNQLIADL 20 (26)
T ss_pred CEEEeCCCCEeeec
Confidence 46999999998864
No 90
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=23.36 E-value=50 Score=23.48 Aligned_cols=19 Identities=26% Similarity=0.289 Sum_probs=16.7
Q ss_pred eEEEEcCCCcEEEEEeccc
Q 027372 90 ECILVDENDRVVGHENKYN 108 (224)
Q Consensus 90 ~~~vvD~~d~~iG~~~R~~ 108 (224)
.+.|+|++|+++|..++..
T Consensus 101 ~lpVvd~~g~~~Giit~~d 119 (128)
T 3gby_A 101 VVPLADEDGRYEGVVSRKR 119 (128)
T ss_dssp EEEEECTTCBEEEEEEHHH
T ss_pred EEEEECCCCCEEEEEEHHH
Confidence 4889999999999998865
No 91
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=23.31 E-value=75 Score=22.77 Aligned_cols=19 Identities=26% Similarity=0.375 Sum_probs=16.6
Q ss_pred eEEEEcCCCcEEEEEeccc
Q 027372 90 ECILVDENDRVVGHENKYN 108 (224)
Q Consensus 90 ~~~vvD~~d~~iG~~~R~~ 108 (224)
.+.|+|++|+++|..++..
T Consensus 118 ~l~Vvd~~g~~~Giit~~d 136 (152)
T 4gqw_A 118 RLPVVDSDGKLVGIITRGN 136 (152)
T ss_dssp EEEEECTTSBEEEEEEHHH
T ss_pred EEEEECCCCcEEEEEEHHH
Confidence 4789999999999998865
No 92
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=23.11 E-value=73 Score=23.40 Aligned_cols=20 Identities=35% Similarity=0.429 Sum_probs=17.1
Q ss_pred CeEEEEcCCCcEEEEEeccc
Q 027372 89 DECILVDENDRVVGHENKYN 108 (224)
Q Consensus 89 E~~~vvD~~d~~iG~~~R~~ 108 (224)
..+.|+|++|+++|..++..
T Consensus 125 ~~lpVvd~~g~~vGiit~~d 144 (152)
T 2uv4_A 125 HRLVVVDENDVVKGIVSLSD 144 (152)
T ss_dssp SEEEEECTTSBEEEEEEHHH
T ss_pred eEEEEECCCCeEEEEEEHHH
Confidence 35889999999999998864
No 93
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=22.86 E-value=76 Score=22.53 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=16.3
Q ss_pred eEEEEcCCCcEEEEEeccc
Q 027372 90 ECILVDENDRVVGHENKYN 108 (224)
Q Consensus 90 ~~~vvD~~d~~iG~~~R~~ 108 (224)
.+.|+|++|+++|..++..
T Consensus 111 ~l~Vvd~~g~~~Giit~~d 129 (138)
T 2p9m_A 111 QLPVVDKNNKLVGIISDGD 129 (138)
T ss_dssp EEEEECTTSBEEEEEEHHH
T ss_pred EEEEECCCCeEEEEEEHHH
Confidence 4788999999999998764
No 94
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=22.73 E-value=75 Score=22.48 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=17.0
Q ss_pred eEEEEcCCCcEEEEEecccc
Q 027372 90 ECILVDENDRVVGHENKYNC 109 (224)
Q Consensus 90 ~~~vvD~~d~~iG~~~R~~~ 109 (224)
.+.|+|++|+++|..++...
T Consensus 100 ~l~Vvd~~g~~~Giit~~dl 119 (133)
T 2ef7_A 100 HLPVVDDKGNLKGIISIRDI 119 (133)
T ss_dssp EEEEECTTSCEEEEEEHHHH
T ss_pred EEEEECCCCeEEEEEEHHHH
Confidence 48899999999999988653
No 95
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=22.49 E-value=1.1e+02 Score=28.13 Aligned_cols=57 Identities=21% Similarity=0.160 Sum_probs=34.2
Q ss_pred EEEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 125 FSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 125 ~sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
+-+.|+|.+|+++-..+......+|. .|..+.+... +......++|++.++.|++..
T Consensus 18 ~k~~l~d~~G~il~~~~~~~~~~~p~------~g~~e~d~~~-----~~~~~~~~i~~~~~~~~~~~~ 74 (501)
T 3g25_A 18 SRAILFNQKGEIAGVAQREFKQYFPQ------SGWVEHDANE-----IWTSVLAVMTEVINENDVRAD 74 (501)
T ss_dssp EEEEEECTTSCEEEEEEEECCCBCSS------TTCCEECHHH-----HHHHHHHHHHHHHHTTTCCGG
T ss_pred eEEEEEcCCCCEEEEEEeecccccCC------CCcEEECHHH-----HHHHHHHHHHHHHHhcCCCcc
Confidence 35678999999887665544443442 3444433222 222355667888888888754
No 96
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=22.38 E-value=57 Score=22.66 Aligned_cols=20 Identities=30% Similarity=0.370 Sum_probs=17.1
Q ss_pred CeEEEEcCCCcEEEEEeccc
Q 027372 89 DECILVDENDRVVGHENKYN 108 (224)
Q Consensus 89 E~~~vvD~~d~~iG~~~R~~ 108 (224)
..+.|+|++|+++|..++..
T Consensus 94 ~~l~Vvd~~g~~~Givt~~d 113 (122)
T 3kpb_A 94 SGVPVVDDYRRVVGIVTSED 113 (122)
T ss_dssp SEEEEECTTCBEEEEEEHHH
T ss_pred CeEEEECCCCCEEEEEeHHH
Confidence 45889999999999998864
No 97
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=22.10 E-value=56 Score=23.28 Aligned_cols=19 Identities=26% Similarity=0.261 Sum_probs=16.6
Q ss_pred eEEEEcCCCcEEEEEeccc
Q 027372 90 ECILVDENDRVVGHENKYN 108 (224)
Q Consensus 90 ~~~vvD~~d~~iG~~~R~~ 108 (224)
.+.|+|++|+++|..++..
T Consensus 101 ~lpVvd~~g~~~Giit~~d 119 (127)
T 3nqr_A 101 MAIVIDEFGGVSGLVTIED 119 (127)
T ss_dssp EEEEECTTSCEEEEEEHHH
T ss_pred EEEEEeCCCCEEEEEEHHH
Confidence 4789999999999998864
No 98
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=21.06 E-value=59 Score=24.23 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=17.1
Q ss_pred eEEEEcCCCcEEEEEecccc
Q 027372 90 ECILVDENDRVVGHENKYNC 109 (224)
Q Consensus 90 ~~~vvD~~d~~iG~~~R~~~ 109 (224)
.+.|+|++|+++|..++..+
T Consensus 131 ~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 131 RLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp EEEEECTTCBEEEEEEHHHH
T ss_pred EEEEECCCCeEEEEEEHHHH
Confidence 48899999999999988753
No 99
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=20.86 E-value=61 Score=23.16 Aligned_cols=20 Identities=25% Similarity=0.323 Sum_probs=17.0
Q ss_pred CeEEEEcCCCcEEEEEeccc
Q 027372 89 DECILVDENDRVVGHENKYN 108 (224)
Q Consensus 89 E~~~vvD~~d~~iG~~~R~~ 108 (224)
..+.|+|++|+++|..++..
T Consensus 103 ~~~~Vvd~~g~~vGivt~~d 122 (130)
T 3i8n_A 103 QLALVVDEYGTVLGLVTLED 122 (130)
T ss_dssp CEEEEECTTSCEEEEEEHHH
T ss_pred eEEEEEcCCCCEEEEEEHHH
Confidence 35789999999999998864
No 100
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=20.39 E-value=64 Score=22.99 Aligned_cols=20 Identities=25% Similarity=0.366 Sum_probs=17.1
Q ss_pred CeEEEEcCCCcEEEEEeccc
Q 027372 89 DECILVDENDRVVGHENKYN 108 (224)
Q Consensus 89 E~~~vvD~~d~~iG~~~R~~ 108 (224)
..+.|+|++|+++|..++..
T Consensus 115 ~~l~Vvd~~g~~~Giit~~d 134 (144)
T 2nyc_A 115 HRFFVVDDVGRLVGVLTLSD 134 (144)
T ss_dssp SEEEEECTTSBEEEEEEHHH
T ss_pred CEEEEECCCCCEEEEEEHHH
Confidence 35889999999999998864
No 101
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=20.23 E-value=1.2e+02 Score=27.96 Aligned_cols=56 Identities=14% Similarity=0.180 Sum_probs=34.2
Q ss_pred EEEEEeCCCeEEEEEecCCCCCCCCceeecCCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 027372 126 SVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 192 (224)
Q Consensus 126 sv~lfn~~g~lLLqqRs~~K~tfPG~Wd~t~gGh~~~gEs~~~~~~~~g~~~AA~REL~EElGI~~~ 192 (224)
-+.|+|.+|+++-..+......+|. .|..+.+... +......++|++.++.|+...
T Consensus 39 k~~l~d~~G~il~~~~~~~~~~~p~------~g~~e~dp~~-----~~~~i~~~i~~~~~~~~~~~~ 94 (520)
T 4e1j_A 39 RAIVFDGNQKIAGVGQKEFKQHFPK------SGWVEHDPEE-----IWQTVVSTVKEAIEKSGITAN 94 (520)
T ss_dssp EEEEECTTSCEEEEEEEECCCBCSS------TTCCEECHHH-----HHHHHHHHHHHHHHTTTCCGG
T ss_pred EEEEECCCCCEEEEEEEecccccCC------CCcEEECHHH-----HHHHHHHHHHHHHHhcCCCcc
Confidence 4578899999887765554444553 3444433222 222455677888888887654
No 102
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=20.16 E-value=78 Score=23.86 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=16.1
Q ss_pred EEEEcCCCcEEEEEeccc
Q 027372 91 CILVDENDRVVGHENKYN 108 (224)
Q Consensus 91 ~~vvD~~d~~iG~~~R~~ 108 (224)
+.|+|++|+++|..+.+.
T Consensus 52 ~pVvd~~g~lvGiit~~D 69 (170)
T 4esy_A 52 APVVDQNGHLVGIITESD 69 (170)
T ss_dssp EEEECTTSCEEEEEEGGG
T ss_pred EEEEcCCccEEEEEEHHH
Confidence 789999999999998765
Done!