BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027377
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5D9C6|MAF1_BOVIN Repressor of RNA polymerase III transcription MAF1 homolog OS=Bos
taurus GN=MAF1 PE=2 SV=1
Length = 260
Score = 130 bits (328), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 127/239 (53%), Gaps = 32/239 (13%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSL 60
MK LE + + IN L + G+ I G +E+YSCK G DK + E ++ ++L
Sbjct: 1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEAL 59
Query: 61 ---DTDSSSPAEF-----------LLSRSSRKALIYLVLTLYHMY-PDYDFSAVKAHQFF 105
T SP+ L + SRK L YL+ TL + PDYDFS ++H+F
Sbjct: 60 SPPQTSGLSPSRLSKSQGGEDEGPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFS 119
Query: 106 TEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDS 165
E S + +F A +E +L L+ A+DE + L EC+IYSYNPD DS
Sbjct: 120 REPSLSWVVNAVNCSLFSAVRE-----DFKALKPQLWNAVDEEICLAECDIYSYNPDLDS 174
Query: 166 DPFLEKGAIWSFNFFFYNRKLKRVVSFRFSCLSNLVAEGFLVNGSTYEDDGEIFDDMDM 224
DPF E G++WSFN+FFYN++LKR+V FSC S ++GSTY E +++DM
Sbjct: 175 DPFGEDGSLWSFNYFFYNKRLKRIV--FFSCRS--------ISGSTYT-PSEAGNELDM 222
>sp|Q9H063|MAF1_HUMAN Repressor of RNA polymerase III transcription MAF1 homolog OS=Homo
sapiens GN=MAF1 PE=1 SV=2
Length = 256
Score = 130 bits (326), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 126/239 (52%), Gaps = 32/239 (13%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSL 60
MK LE + + IN L + G+ I G +E+YSCK G DK + E ++ ++L
Sbjct: 1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEAL 59
Query: 61 ---DTDSSSPAEF-----------LLSRSSRKALIYLVLTLYHMY-PDYDFSAVKAHQFF 105
T SP+ L + SRK L YL+ TL + PDYDFS ++H+F
Sbjct: 60 SPPQTSGLSPSRLSKSQGGEEEGPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFS 119
Query: 106 TEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDS 165
E S + +F A +E L L+ A+DE + L EC+IYSYNPD DS
Sbjct: 120 REPSLSWVVNAVNCSLFSAVRE-----DFKDLKPQLWNAVDEEICLAECDIYSYNPDLDS 174
Query: 166 DPFLEKGAIWSFNFFFYNRKLKRVVSFRFSCLSNLVAEGFLVNGSTYEDDGEIFDDMDM 224
DPF E G++WSFN+FFYN++LKR+V FSC S ++GSTY E +++DM
Sbjct: 175 DPFGEDGSLWSFNYFFYNKRLKRIV--FFSCRS--------ISGSTY-TPSEAGNELDM 222
>sp|Q7ZWL6|MAF1_XENLA Repressor of RNA polymerase III transcription MAF1 homolog
OS=Xenopus laevis GN=maf1 PE=2 SV=1
Length = 245
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 112/215 (52%), Gaps = 28/215 (13%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDY----- 55
MK LE + + +N L + G+ I G +E+YSCK G DK + E +
Sbjct: 1 MKLLENSHFEAVNSQL-CVETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEAL 59
Query: 56 -----------LGKSLDTDSSSPAEFLLSRSSRKALIYLVLTLYHMY-PDYDFSAVKAHQ 103
LGKS D P L + SRK L YL+ TL + PDYDFSA +AH+
Sbjct: 60 SPPQTGISPSRLGKSQGADEEGP---LSDKCSRKTLFYLIATLNESFRPDYDFSAARAHE 116
Query: 104 FFTEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDS 163
F E S N + + A + +SL L+ A+DE + L EC+IYSYNPD
Sbjct: 117 FSREPSLNWVVNAVNSSLVSALGD-----DFTSLRPNLWDAVDEEINLSECDIYSYNPDL 171
Query: 164 DSDPFLEKGAIWSFNFFFYNRKLKRVVSFRFSCLS 198
D DPF E G +WSFN+FFYN+KLKR+V FSC S
Sbjct: 172 DCDPFGEDGNLWSFNYFFYNKKLKRIV--FFSCRS 204
>sp|Q5XIH0|MAF1_RAT Repressor of RNA polymerase III transcription MAF1 homolog
OS=Rattus norvegicus GN=Maf1 PE=2 SV=1
Length = 260
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 120/227 (52%), Gaps = 31/227 (13%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSL 60
MK LE + + IN L + G+ I G +E+YSCK G DK + E ++ ++L
Sbjct: 1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEAL 59
Query: 61 ---DTDSSSPAEF-----------LLSRSSRKALIYLVLTLYHMY-PDYDFSAVKAHQFF 105
T SP+ L + SRK L YL+ TL + PDYDFS ++H+F
Sbjct: 60 SPPQTSGLSPSRLSKSQGGEDESPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFS 119
Query: 106 TEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDS 165
E S +F A +E +L L+ A+DE + L EC+IYSYNPD DS
Sbjct: 120 REPSLRWVVNAVNCSLFSAVRE-----DFKALKPQLWNAVDEEICLAECDIYSYNPDLDS 174
Query: 166 DPFLEKGAIWSFNFFFYNRKLKRVVSFRFSCLSNLVAEGFLVNGSTY 212
DPF E G++WSFN+FFYN++LKR+V FSC S ++GSTY
Sbjct: 175 DPFGEDGSLWSFNYFFYNKRLKRIV--FFSCRS--------ISGSTY 211
>sp|Q9D0U6|MAF1_MOUSE Repressor of RNA polymerase III transcription MAF1 homolog OS=Mus
musculus GN=Maf1 PE=2 SV=1
Length = 258
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 120/227 (52%), Gaps = 31/227 (13%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSL 60
MK LE + + IN L + G+ I G +E+YSCK G DK + E ++ ++L
Sbjct: 1 MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEAL 59
Query: 61 ---DTDSSSPAEF-----------LLSRSSRKALIYLVLTLYHMY-PDYDFSAVKAHQFF 105
T SP+ L + SRK L YL+ TL + PDYDFS ++H+F
Sbjct: 60 SPPQTSGLSPSRLSKSQGGEDESPLSDKCSRKTLFYLIATLNESFRPDYDFSTARSHEFS 119
Query: 106 TEESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDS 165
E S +F A +E +L L+ A+DE + L EC+IYSYNPD DS
Sbjct: 120 REPSLRWVVNAVNCSLFSAVRE-----DFKALKPQLWNAVDEEICLAECDIYSYNPDLDS 174
Query: 166 DPFLEKGAIWSFNFFFYNRKLKRVVSFRFSCLSNLVAEGFLVNGSTY 212
DPF E G++WSFN+FFYN++LKR+V FSC S ++GSTY
Sbjct: 175 DPFGEDGSLWSFNYFFYNKRLKRIV--FFSCRS--------ISGSTY 211
>sp|Q6PGU2|MAF1_DANRE Repressor of RNA polymerase III transcription MAF1 homolog OS=Danio
rerio GN=maf1 PE=2 SV=1
Length = 247
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 116/216 (53%), Gaps = 20/216 (9%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSL 60
MK LE + + IN L + G+ I G +E+YSCK G DK++ E ++ ++L
Sbjct: 1 MKLLENSSFEAINSLLT-IETGDCKIIGRIESYSCKMAGDDKQMFKQFCQEGQPHVLEAL 59
Query: 61 DTDSSS---PAEF----------LLSRSSRKALIYLVLTLYHMY-PDYDFSAVKAHQFFT 106
SS P + L + SRK L YL+ TL + PDYDFS K H F
Sbjct: 60 SPPQSSGISPNKLSHSLDDGEGPLSDKCSRKTLFYLIATLNESFRPDYDFSRTKGHDFSK 119
Query: 107 EESWNTFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSD 166
E S N +F S E Y S L L++ALD+ + L EC+IYSYNPD DSD
Sbjct: 120 EPSVN---WVFNAVNSSLSAAAGEAY--SHLQPQLWEALDKEISLAECDIYSYNPDLDSD 174
Query: 167 PFLEKGAIWSFNFFFYNRKLKRVVSFRFSCLSNLVA 202
P+ E+G +WSFN+FFYN++LKR+V F +S +A
Sbjct: 175 PYGEEGNLWSFNYFFYNKRLKRIVFFTCRSVSLFMA 210
>sp|O14109|MAF1_SCHPO Repressor of RNA polymerase III transcription maf1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=maf1 PE=1 SV=5
Length = 238
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEH---EILDYLG 57
MKFLE LD +N+ L + + I+G E Y+ K T +DK+L ++E+ E L L
Sbjct: 1 MKFLELADLDTVNNAL-SFDADDCRIRGKCELYTTKSTNSDKKLFKAIENRCQEDLFALS 59
Query: 58 KSLDTD------SSSPAEFLLSRSSRKALIYLVLTLYHMYPDYDFSAVKAHQFFTEESWN 111
S + SP L SSR+ +Y+V TL YPD+DFS+++ F+ E S +
Sbjct: 60 SSKSPEYAFSLTQQSPFGPLDQSSSRRTFMYIVATLNASYPDHDFSSLQPTDFYKEPSLS 119
Query: 112 TFKQIFETYMFEASKEWSETYGGSSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEK 171
+ + + G + +++ +D + L +C +YSY PDSDSDP+ +
Sbjct: 120 RVVDSVNSTLNNIGR-------GRLSVNGIWEIIDRHINLSDCSVYSYTPDSDSDPYGDD 172
Query: 172 GAIWSFNFFFYNRKLKRVV 190
IW ++FF+N+ +KR++
Sbjct: 173 ALIWGMSYFFFNKNMKRML 191
>sp|Q54Y76|MAF1_DICDI Repressor of RNA polymerase III transcription OS=Dictyostelium
discoideum GN=maf1 PE=3 SV=1
Length = 278
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 51/245 (20%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILD------ 54
MK+++ L +N +L+ +++G+ + G LEAYSCK G+DK++ SL+ E+ +
Sbjct: 1 MKYIDSLQLIGLNSYLNSIDVGDALLMGELEAYSCKMAGSDKKIYRSLDKELEELSNTNS 60
Query: 55 ---------------------------------YLGKSLDTDSS------SPAEFLLSRS 75
L S+++ S SP + + +
Sbjct: 61 GAMNITNSNNNTNNNNNNNSNSGSSNNNNNNNNTLSVSMNSPSPTSNISVSPFGPMSNST 120
Query: 76 SRKALIYLVLTLYHMYPDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGGS 135
SRK +IYL+ L +PDYDF+ K QF E S N + K++ +
Sbjct: 121 SRKTMIYLIQLLNLSFPDYDFTDSKPEQFQKEPSLNLVINSINANLAGYIKDYYLEFEAK 180
Query: 136 SLLETLYKALDEVVKLPECEIYSYNPDSDSDPFLEKGAIWSFNFFFYNRKLKRVVSFRFS 195
L+ L+ + L +CEIY Y P+ + DPF E G ++SFN+FFYN+ LK+++ F+
Sbjct: 181 -----LWSTLESEISLQKCEIYLYKPE-NGDPFTENGVLFSFNYFFYNKSLKKIIFFKCR 234
Query: 196 CLSNL 200
+S L
Sbjct: 235 YISKL 239
>sp|P41910|MAF1_YEAST Repressor of RNA polymerase III transcription MAF1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAF1 PE=1
SV=1
Length = 395
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 75 SSRKALIYLVLTLYHMYPDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGG 134
SSRK YL+ L YPD+DFS+V+ F + S TF FE ++ G
Sbjct: 230 SSRKIFAYLIAILNASYPDHDFSSVEPTD-FVKTSLKTFISKFENTLYSL---------G 279
Query: 135 SSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFL--EKGAIWSFNFFFYNRKLKRVVSF 192
E +++ ++ + L +C ++ Y+P S+ FL E G +W+ F YNRK KRV
Sbjct: 280 RQPEEWVWEVINSHMTLSDCVLFQYSP---SNSFLEDEPGYLWNLIGFLYNRKRKRVAYL 336
Query: 193 RFSC 196
C
Sbjct: 337 YLIC 340
>sp|Q757K3|MAF1_ASHGO Repressor of RNA polymerase III transcription MAF1 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=MAF1 PE=3 SV=1
Length = 397
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 75 SSRKALIYLVLTLYHMYPDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGG 134
+SR+ YL+ L YPD+DF+++K F ++ KQ+ + E S G
Sbjct: 217 ASRRTFAYLIGILNASYPDHDFASLKPTDFVK----SSRKQLVSKF------ENSIIALG 266
Query: 135 SSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFL--EKGAIWSFNFFFYNRKLKRVVSF 192
E +++ ++ + L +C Y YNP + FL E G +WS +F +N+K KRV F
Sbjct: 267 KQPQEWIWETINAHMDLADCVFYQYNP---QESFLDDEPGHLWSLMWFMFNKKRKRVAYF 323
Query: 193 RFSC 196
S
Sbjct: 324 YLSA 327
>sp|Q6FIZ7|MAF1_CANGA Repressor of RNA polymerase III transcription MAF1 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=MAF1 PE=3 SV=1
Length = 391
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 75 SSRKALIYLVLTLYHMYPDYDFSAVKAHQFFTEESWNTFKQIFETYMFEASKEWSETYGG 134
SSR+ YL+ L YPD+DFS ++ F S +F FE M+ G
Sbjct: 222 SSRRTFAYLIAILNASYPDHDFSLLEPTD-FKRSSIKSFIAKFENSMYSL---------G 271
Query: 135 SSLLETLYKALDEVVKLPECEIYSYNPDSDSDPFL--EKGAIWSFNFFFYNRKLKRVV 190
E +++ ++ + L +C +Y Y P + FL E G +WS FF+N+K KRV
Sbjct: 272 RKPEEWIWEVINSHMTLSDCVLYQYCP---TQSFLDDEPGHLWSLIGFFFNKKRKRVA 326
>sp|Q8SUU2|Y7I4_ENCCU Uncharacterized protein ECU07_1840 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU07_1840 PE=4 SV=1
Length = 161
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 48/195 (24%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSL 60
M++LE + + N L + +EAYSCK + +
Sbjct: 1 MRYLELGCISKTNKLFQKLQDLNPLLNIEIEAYSCKSSRRQR------------------ 42
Query: 61 DTDSSSPAEFLLSRSSRKALIYLVLTLYHMYPDYDFSAVKAHQFFTEESWNTFKQ-IFET 119
R K L YL+ L +PDYDF ESW +F++
Sbjct: 43 ------------GRFVEKPLGYLLSALELRFPDYDFCG---------ESWGSFRRKTLAE 81
Query: 120 YMFEASKEWSETYGGSSLLETLYKALDEV----VKLPECEIYSYNPDSDSDPFLEKGAIW 175
+ E + S T+ S ++ L+ + V L CEI+SY ++ PF + +W
Sbjct: 82 VLNEMTYSISTTHKNSDDVKEFVGFLEVILHRSVSLGGCEIFSY--ENRMGPF--EDCLW 137
Query: 176 SFNFFFYNRKLKRVV 190
F+F F+N+K +RVV
Sbjct: 138 YFSFLFFNKKQRRVV 152
>sp|Q8STI4|YA60_ENCCU Uncharacterized protein ECU10_0060/ECU11_2080i OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU10_0060 PE=4 SV=1
Length = 283
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 48/195 (24%)
Query: 1 MKFLEYTPLDRINDFLDHLNLGERTIKGCLEAYSCKHTGTDKRLSISLEHEILDYLGKSL 60
M++LE + + N L + +EAYSCK + +
Sbjct: 123 MRYLELGCISKTNKLFQKLQDLNPLLNIEIEAYSCKSSRRQR------------------ 164
Query: 61 DTDSSSPAEFLLSRSSRKALIYLVLTLYHMYPDYDFSAVKAHQFFTEESWNTFKQ-IFET 119
R K L YL+ L +PDYDF ESW +F++
Sbjct: 165 ------------GRFVEKPLGYLLSALELRFPDYDFCG---------ESWGSFRRKTLAE 203
Query: 120 YMFEASKEWSETYGGSSLLETLYKALDEV----VKLPECEIYSYNPDSDSDPFLEKGAIW 175
+ E + S T+ S ++ L+ + V L CEI+SY ++ PF + +W
Sbjct: 204 VLNEMTYSISTTHKNSDDVKEFVGFLEVILHRSVSLGGCEIFSY--ENRMGPFED--CLW 259
Query: 176 SFNFFFYNRKLKRVV 190
F+F F+N+K +RVV
Sbjct: 260 YFSFLFFNKKQRRVV 274
>sp|B3ENV8|QUEC_CHLPB 7-cyano-7-deazaguanine synthase OS=Chlorobium phaeobacteroides
(strain BS1) GN=queC PE=3 SV=1
Length = 226
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 18 HLNLGERTIKGCLEAYS--CKHTGTDKRLSISLEHEILDYLGKSLDTDSSSPAE 69
H+N G+RT + L A+ C H +++L + + L+++G S TDSS P E
Sbjct: 31 HVNYGQRTWQKELTAFRRICSHYAIERKLEVDAAY--LEHIGGSSLTDSSIPVE 82
>sp|B2JER3|COBQ_BURP8 Cobyric acid synthase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=cobQ PE=3 SV=1
Length = 484
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 52 ILDYL-GKSLDTDSSSPAEFLLSRSSRKALIYLVLTLYHMYPDYDFSAVKAH 102
++ YL G +LD + P E +++S AL +V L H+ DF A++AH
Sbjct: 218 VVPYLHGLTLDAEDMLPRELRAAQASADALRVVVPALPHISNHTDFDALRAH 269
>sp|Q8AY73|XPO2_ORENI Exportin-2 OS=Oreochromis niloticus GN=cse1l PE=2 SV=1
Length = 971
Score = 30.8 bits (68), Expect = 8.5, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 102 HQFFTEESWNTFKQIFETY------MFEASKEWSETYGGS-SLLETLYKALDEVVKLPEC 154
H+F + E W+ K + +T+ +F+A+ E +T+ + L+ L+ +L + KL
Sbjct: 162 HEFKSNELWSEIKLVLDTFALPLTELFKATIELCQTHATDVNALKVLFSSLTLIAKL--- 218
Query: 155 EIYSYNPDSDSDPFLEKGAIWSFNF 179
YS N + F + W NF
Sbjct: 219 -FYSLNFQDLPEFFEDNMETWMTNF 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,964,270
Number of Sequences: 539616
Number of extensions: 3507140
Number of successful extensions: 7623
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 7583
Number of HSP's gapped (non-prelim): 27
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)