BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027382
(224 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/224 (89%), Positives = 210/224 (93%), Gaps = 1/224 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN Y D+NQKIDYVFK+VLIGDSAVGKSQLLARFARNEF VDSKATIGVEFQTKTLSID
Sbjct: 1 MSN-YVDFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSID 59
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 60 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 119
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLGSLRAVP EDAQEFAQRENLFFMETSALE+TNVETAFLTVLTEIYR+I
Sbjct: 120 IVIMLIGNKCDLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVI 179
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
SKK+LTAN+E D G S LLKGTRIIVPG DQ A K GCC+SS
Sbjct: 180 SKKTLTANEELDTNGTSGLLKGTRIIVPGHDQAPAKKGGCCMSS 223
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/224 (87%), Positives = 209/224 (93%), Gaps = 1/224 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61 QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
SKKSL A +E D+ N L KGT I+VPGQDQ+S ++GCC +S
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSG-RKGCCFAS 223
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/221 (90%), Positives = 211/221 (95%), Gaps = 2/221 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARFARNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WL+ELRGHADKN
Sbjct: 61 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLT+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SKKSLTA+D+ D GNS+LLKGTRII+P + Q S + GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSE-QESGKRGGCC 219
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/222 (87%), Positives = 210/222 (94%), Gaps = 1/222 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RN+F+VDSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHAD N
Sbjct: 61 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLG+L+AVPTEDAQEFAQRENLFFMETSALE+TNVETAFLT+LTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
SKK+LTANDE D G S LLKGTRIIVP QD ++ K+ GCC
Sbjct: 181 SKKTLTANDEADPGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/223 (87%), Positives = 209/223 (93%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGD+NQKIDYVFKVVLIGDSAVGKSQLLARFARNEF+VDSKATIGVEFQTKTL+ID
Sbjct: 1 MSNLYGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61 QKAVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DLGSLRAVPTEDAQEFA+RENLFFMETSALEATNVETAFLTVLT+IY+II
Sbjct: 121 IVIMLIGNKSDLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKII 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
SKK+LTAN + D G+S LLKGT+IIVPG ++A K GCC S
Sbjct: 181 SKKTLTANTDTDSTGSSTLLKGTKIIVPGGPDSAAQKGGCCGS 223
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/221 (89%), Positives = 209/221 (94%), Gaps = 4/221 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARFARNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQER AVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WL+ELRGHADKN
Sbjct: 61 NKTVKAQIWDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLT+LTEIYRII
Sbjct: 119 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 178
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SKKSLTA+D+ D GNS+LLKGTRII+P + Q S + GCC
Sbjct: 179 SKKSLTADDD-DADGNSSLLKGTRIIIPSE-QESGKRGGCC 217
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/224 (85%), Positives = 212/224 (94%), Gaps = 3/224 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYG+YNQKIDYVFKVVLIGDSAVGK+QLLARFA+N+FSVDSKATIGVEFQTKTL ID
Sbjct: 87 MSNLYGEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIID 146
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD+MA+WL+ELRGHADKN
Sbjct: 147 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKN 206
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+MLIGNKCDLG+LRAVPTEDA+EFAQRENLFFMETSALE+TNVETAFLT+LTEIYR+I
Sbjct: 207 IVVMLIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLI 266
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR---GCC 221
SKK+LTAND+ D +G S LLKGT+IIVP Q+ N+ K+ GCC
Sbjct: 267 SKKTLTANDDADPSGISGLLKGTKIIVPSQEINAGEKKGKGGCC 310
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/226 (85%), Positives = 211/226 (93%), Gaps = 2/226 (0%)
Query: 1 MSNLY-GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI 59
MSN Y GDY+QKIDYVFKVVLIGDSAVGKSQLLARFARNEF++DSKATIGVEFQTKTL I
Sbjct: 1 MSNFYKGDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVI 60
Query: 60 DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADK 119
DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL ELRGHADK
Sbjct: 61 DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADK 120
Query: 120 NIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI 179
NIVIML+GNK DLG+L+AVPTEDA+EFA+RENLFFMETSALEATNVETAFL+VLTEIYRI
Sbjct: 121 NIVIMLVGNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRI 180
Query: 180 ISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNS-ASKRGCCLSS 224
ISKK+L AN+E + GNS+LLKGT+IIVPG++ S SK CCLSS
Sbjct: 181 ISKKTLVANEEVESGGNSSLLKGTKIIVPGKEPKSEGSKYNCCLSS 226
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 209/222 (94%), Gaps = 1/222 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYG+YN KIDYVFKVVL+GDSAVGK+QLLARFA+N+F+VDSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGEYNHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+R SFD+MA+WL+ELRGHADKN
Sbjct: 61 KKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+MLIGNKCDLG+LRAVPTEDA+EFAQRENLFFMETSALE+TNVETAFLT+LTEIYR++
Sbjct: 121 IVVMLIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
SKK+LTAND+ D +G S LLKGT+IIVP QD N+ K+ GCC
Sbjct: 181 SKKTLTANDDADPSGISGLLKGTKIIVPSQDINAGEKKGGCC 222
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/222 (85%), Positives = 205/222 (92%), Gaps = 4/222 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN Y DYNQKIDYVFK+VLIGDSAVGKSQ LARFARNEF+ DSKATIGVEFQTKTL++D
Sbjct: 1 MSN-YVDYNQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMD 59
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+ARWL+ELRGHADK+
Sbjct: 60 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKS 119
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
I+IMLIGNKCDLGSLRAVPTEDA+EFAQRENLFFMETSALEATNVETAF TVLTEIYRII
Sbjct: 120 IIIMLIGNKCDLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRII 179
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
SKK+L ND+ D GN + KGTRI+VP Q QNS K+GCC+
Sbjct: 180 SKKTLAGNDKSD--GNPGVFKGTRILVPSQAQNS-EKKGCCM 218
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/222 (85%), Positives = 206/222 (92%), Gaps = 4/222 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN Y DYNQKIDYVFK+VLIGDSAVGKSQLLARFARNEF+VDSKATIGVEFQTKTL++
Sbjct: 1 MSN-YVDYNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMH 59
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADK+
Sbjct: 60 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKS 119
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
I+IMLIGNKCDLGSLRAVP EDA+EFAQRENLFFMETSALEATNVETAFLT+LTEIYRII
Sbjct: 120 IIIMLIGNKCDLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRII 179
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
SK++L NDE + NS KGTRI+VP Q+QNS K+GCC+
Sbjct: 180 SKRTLAGNDESN--ENSGAFKGTRILVPSQEQNS-EKKGCCM 218
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/223 (82%), Positives = 204/223 (91%), Gaps = 1/223 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNL ++NQKIDYVFKVVLIGDSAVGKSQLL+RFARNEFS+DSKATIGVEFQTKTL+ID
Sbjct: 1 MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDH+ARWL+ELRGHADKN
Sbjct: 61 QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DLGSLR VPTEDA+EFAQ ENL FMETSALEATNVE AF T+LTEIYR+I
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
SKK+L ANDE D G+S+LLKGT+I+VPGQ+ +AS GCC S
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASS-GCCRS 222
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/225 (83%), Positives = 203/225 (90%), Gaps = 3/225 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARFARNEFS+DSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM +WL+ELRGHAD+N
Sbjct: 61 NKIIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLGSLRAVP EDA+E AQRENLFFMETSALE+TNVET FLT+LTEIYRI
Sbjct: 121 IVIMLIGNKCDLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIH 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQD-QNSASKRGCCLSS 224
+KKSLT +D D G S LLKG+RIIVP Q+ N K GCC +S
Sbjct: 181 AKKSLTTSD--DDIGGSGLLKGSRIIVPNQEIYNGGKKGGCCFAS 223
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/225 (83%), Positives = 205/225 (91%), Gaps = 3/225 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGDY+QKIDYVFKVVLIGDSAVGK+QLLARFARNEFS+DSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDYHQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM RWL+ELRGHAD+N
Sbjct: 61 NKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLGSLRAVP EDA+E AQRENLFFMETSALE+TNVET FLT+LTEIYRI
Sbjct: 121 IVIMLIGNKCDLGSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIH 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQD-QNSASKRGCCLSS 224
+KKSLTA+D+ + S LLKG+RIIVP Q+ N K GCC +S
Sbjct: 181 AKKSLTASDDDNWG--SGLLKGSRIIVPNQEIDNGGKKGGCCFAS 223
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/219 (82%), Positives = 203/219 (92%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YG+ QKIDYVFKVVLIGDSAVGKSQLLARFARNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIM
Sbjct: 68 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DLG+LR VPTEDA+EFA+RENLFFMETSALE+TNVE AF+TVLTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
L AN+E D +GNS+LLKGT+I+VPGQ+ +K CC+S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/223 (82%), Positives = 203/223 (91%), Gaps = 1/223 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNL ++NQKIDYVFKVVLIGDSAVGKSQLL+RFARNEFS+DSKATIGVEFQTKTL+ID
Sbjct: 1 MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDH+ARWL+ELRGHADKN
Sbjct: 61 QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DLGSLR VPTEDA+EFAQ ENL FMETSALEATNVE AF T+LTEIYR+I
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
SKK+L ANDE D G+S+LLKGT+ +VPGQ+ +AS GCC S
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKXVVPGQEPQAASS-GCCRS 222
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/220 (80%), Positives = 204/220 (92%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
+G+ Q+IDYVFKVVLIGDSAVGKSQLLARFARNEF++DSKATIGVEFQT+TL+ID +TV
Sbjct: 7 HGELGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIM
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DLG+LR+V TEDA+EFA+RENLFFMETSALEA NVE AF+TVLTEIYR++SKK+
Sbjct: 127 LIGNKSDLGTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L AN+E D +GNS+LLKGT+I+VPGQ+ SK CC+SS
Sbjct: 187 LVANEESDSSGNSSLLKGTKIVVPGQEPPPTSKATCCMSS 226
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/220 (80%), Positives = 199/220 (90%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YG+ Q+IDYVFKVVLIGDSAVGKSQLLARFARNEFS+DSKATIGVEFQT+TL +D +T+
Sbjct: 7 YGEVGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTI 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMARWL+ELR HADKN+VIM
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIM 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DLG+LR VPTEDA+EFA RE+LFFMETSALEATNVE AF T LTEIYR +SKK+
Sbjct: 127 LIGNKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L AN+E D +GNS+LLKGT+IIVPGQ+ +K CC+SS
Sbjct: 187 LVANEETDSSGNSSLLKGTKIIVPGQEPAPPAKAACCMSS 226
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/224 (79%), Positives = 205/224 (91%), Gaps = 1/224 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS ++NQKIDYVFKVVLIGDSAVGKSQLLARF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1 MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HKT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKN
Sbjct: 61 HKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DLG+LRAVPTEDA+EFAQRENLFFMETSAL++ NVE +FLTVLTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
SKK+L AN+E + G+S+LL+GT+I+V G++ S K GCC +S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGK-GCCGTS 223
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/220 (80%), Positives = 202/220 (91%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
+G+ Q+IDYVFKVVLIGDSAVGKSQLLARFARN+F++DSKATIGVEFQT+TL+ID + V
Sbjct: 7 HGELGQRIDYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIM
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DLG+LRAVP EDA+EFA+RENLFFMETSALEA NVE AF+TVLTEIYR +SKK+
Sbjct: 127 LMGNKSDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L AN+E D +GNS+LLKGT+I+VPGQ+ S K CC+SS
Sbjct: 187 LVANEEPDSSGNSSLLKGTKIVVPGQEPPSTLKATCCMSS 226
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/224 (79%), Positives = 204/224 (91%), Gaps = 1/224 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS ++NQKIDYVFKVVLIGDSAVGKSQLLARF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1 MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKN
Sbjct: 61 RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DLG+LRAVPTEDA+EFAQRENLFFMETSAL++ NVE +FLTVLTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
SKK+L AN+E + G+S+LL+GT+I+V G++ S K GCC +S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGK-GCCGTS 223
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/215 (80%), Positives = 196/215 (91%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++IDYVFKVVLIGDSAVGKSQLLARFARNEFS+DSKATIGVEFQT+TL +D +T+KAQIW
Sbjct: 13 KRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIW 72
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMARWL+ELR HADKN+VIMLIGNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNK 132
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DLG+LR VPTEDA+EFA RE+LFFMETSALEATNVE AF T LTEIYR +SKK+L AN+
Sbjct: 133 SDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANE 192
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
E D +GNS+LLKGT+IIVPGQ+ +K CC+SS
Sbjct: 193 ETDSSGNSSLLKGTKIIVPGQEPAPPAKAACCMSS 227
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/222 (78%), Positives = 203/222 (91%), Gaps = 3/222 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNL ++NQKIDYVFK+VLIGDSAVGKSQLLARFARNEF++DSKATIGVEFQTKT+ +D
Sbjct: 1 MSNLQANFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+A+WL+ELR HAD N
Sbjct: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML+GNK DL SLRAVP EDA+EFAQ+ENLFFMETSALEATNVE+AF++VLTEIYR++
Sbjct: 121 IVIMLVGNKSDLESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQD-QNSASKRGCC 221
SKKSL ANDE+ GN++LLKG +I++PGQ+ + A+ CC
Sbjct: 181 SKKSLVANDEY--GGNNSLLKGNKIVIPGQEPEMQATNSSCC 220
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/219 (80%), Positives = 200/219 (91%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YG+ QKIDYVFKVVLIGDSAVGKSQLLA FARNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTV 67
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQ DTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIM
Sbjct: 68 KAQTRDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DLG+LR VPTEDA+EFA+RENLFFMETSALE+TN+E AF+TVLTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKN 187
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
L AN+E D +GNS+LLKGT+I+VPGQ+ +K CC+S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/220 (79%), Positives = 201/220 (91%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
+G+ Q+IDYVFKVVLIGDSA GKSQLLARFARN+F++DSKATIGVEFQT+TL+ID + V
Sbjct: 7 HGELGQRIDYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIM
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DLG+LRAVP EDA+EFA+RENLFFMETSALEA NVE AF+TVLTEIYR +SKK+
Sbjct: 127 LMGNKSDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L AN+E D +GNS+LLKGT+I+VPGQ+ S K CC+SS
Sbjct: 187 LVANEEPDSSGNSSLLKGTKIVVPGQEPPSTLKATCCMSS 226
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/224 (79%), Positives = 202/224 (90%), Gaps = 1/224 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ YGDY +IDYVFK+VLIGDSAVGKSQLLARFARNEFS+DSKATIGVEFQT+TL ID
Sbjct: 1 MAGSYGDYGPRIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ARWL+ELRGHAD N
Sbjct: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLG+LRAVP EDA+EFAQRE LFF+ETSALEA NVE+AFLTVLT+IYRII
Sbjct: 121 IVIMLIGNKCDLGNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRII 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
SKK+L AND+ GNS LL GT+++VPG++Q+ ++ C SS
Sbjct: 181 SKKALIANDDQG-NGNSALLTGTKLVVPGEEQDVSTNNKYCCSS 223
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/224 (80%), Positives = 202/224 (90%), Gaps = 2/224 (0%)
Query: 2 SNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH 61
S+L YNQKIDYVFK+VLIGDSAVGKSQLLARFARNEFS+DSKATIGVEFQTKTL IDH
Sbjct: 3 SSLQATYNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDH 62
Query: 62 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNI 121
KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+A+WL+ELR HAD NI
Sbjct: 63 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNI 122
Query: 122 VIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIIS 181
VIMLIGNK DLG+LRAVPTEDA+EFAQ+ENLFFMETSALEATNVE+AFL+VLTEIYR+IS
Sbjct: 123 VIMLIGNKSDLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVIS 182
Query: 182 KKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCCLSS 224
KK+L AN E + G+S+LLKGT I+VP Q+ S + CC +S
Sbjct: 183 KKALIAN-EQESGGSSSLLKGTNIVVPEQEPVSGGRSFSCCGTS 225
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/195 (89%), Positives = 192/195 (98%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYG+YNQKIDYVFKVVLIGDSAVGK+QLLARFA+N+FSVDSKATIGVEFQTKTL ID
Sbjct: 2 MSNLYGEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIID 61
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD+MA+WL+ELRGHADKN
Sbjct: 62 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKN 121
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+MLIGNKCDLG+LRAVPTEDA+EFAQRENLFFMETSALE+TNVETAFLT+LTEIYR+I
Sbjct: 122 IVVMLIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLI 181
Query: 181 SKKSLTANDEHDVAG 195
SKK+LTAND+ D +G
Sbjct: 182 SKKTLTANDDADPSG 196
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/199 (86%), Positives = 190/199 (95%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGD+NQKIDYVFKVVLIGDSAVGK+QLLARF+RN+F+VDSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMA+WL+ELRGHAD N
Sbjct: 61 SKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDL +L+AVPTEDAQEFAQRENLFFMETSALE+TNVETAFLT+LTEIYR+I
Sbjct: 121 IVIMLIGNKCDLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLI 180
Query: 181 SKKSLTANDEHDVAGNSNL 199
KK+LTAND+ D +G+S
Sbjct: 181 GKKTLTANDDTDPSGSSGF 199
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/221 (78%), Positives = 195/221 (88%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQ+IDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSK+TIGVEFQT+TL IDHKTV
Sbjct: 3 YGDANQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 62
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 63 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 122
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L GNKCDL + R VPTEDA+EFA++E LFF+ETSALEATNVETAF+TVLTEIY I++KK+
Sbjct: 123 LTGNKCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKN 182
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
LTA DE+ GNS L G +IIVPG Q +KR CC SS
Sbjct: 183 LTA-DENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 222
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 195/218 (89%), Gaps = 1/218 (0%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
D N KIDYVFKVVLIGDSAVGKSQ+L+RFAR+EFS+DSKATIGVEFQT+T+ I+HK+VKA
Sbjct: 2 DMNPKIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKA 61
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD NIVIML+
Sbjct: 62 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLV 121
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNKCDL +LRAVPTEDA+EFAQ+E LFF+ETSA+EATNVETAFLTVLTEI++I+SKKSL
Sbjct: 122 GNKCDLDNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLI 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A+ + GN L GT I+VPGQ+Q++ +K+ C +S
Sbjct: 182 ASQDQG-NGNHASLSGTSIVVPGQEQDTTTKKKSCCTS 218
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 197/223 (88%), Gaps = 3/223 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ YGDY+Q+IDY+FKVV+IGDSAVGKSQ+L+RFA+NEFS+DSK+TIGVEFQT+T++ID
Sbjct: 1 MASPYGDYDQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KT+K QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+ARWL+ELRGHAD N
Sbjct: 61 NKTIKTQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDL +RAVP EDA+EFAQRE LFF ETSALEA NVETAF+T LTEIYRI+
Sbjct: 121 IVIMLIGNKCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIV--PGQDQNSASKRGCC 221
S+K+LTAN+E + GN+ L GT+I + P Q + KR CC
Sbjct: 181 SRKALTANEE-ERNGNAAALTGTKIALSSPEQPVMTVKKRSCC 222
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 192/221 (86%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD N KIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSK+TIGVEFQT+TL IDHKTV
Sbjct: 7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNKCDL + R VPTEDA+EFA++E LFF+ETSALEATNVE+AF TVLTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
L A DE GNS L G +II+PG Q +KR CC +S
Sbjct: 187 LAA-DESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/223 (75%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I
Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD+N
Sbjct: 61 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DL RAVPTEDA+EFAQ+E LFF+ETSA+EATNVE AFLTVLTEI+ I+
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+KK+L A DE+ GN L G +I+VPG Q K+ CC S
Sbjct: 181 NKKNLAA-DENQSNGNPASLTGKKILVPGPGQVIPGKKACCSS 222
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 192/217 (88%), Gaps = 2/217 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
NQ+IDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSK+TIGVEFQT+TL IDHKTVKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL + R VPTEDA+EFA++E LFF+ETSALEATNVETAF+TVLTEIY I++KK+LTA
Sbjct: 134 KCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA- 192
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
DE+ GNS L G +IIVPG Q +KR CC SS
Sbjct: 193 DENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 229
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 166/223 (74%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL+I
Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQ 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD+N
Sbjct: 61 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DL RAVPTEDA+EFAQ+E LFF+ETSA+EATN+E AFLTVLTEI+ I+
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+KK+L A+D GN L G +I+VPG Q K+ CC S
Sbjct: 181 NKKNLAADDNQS-NGNPASLTGKKILVPGPGQVIPEKKACCSS 222
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 167/217 (76%), Positives = 189/217 (87%), Gaps = 1/217 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQKIDYVFKVVLIGDSAVGKSQ+LARFARN+FS+DSKATIGVEFQT+TL I+HK+V
Sbjct: 6 YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSV 65
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR SFDH+ RWL+ELR HADKNIVI+
Sbjct: 66 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVII 125
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RAVPTEDA+EFA++E LFF+ETSAL+ATNVETAF+TVLTEI+ I++KK+
Sbjct: 126 LIGNKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKN 185
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
L A DE+ GNS L G +IIVPG Q K CC
Sbjct: 186 LAA-DENQGNGNSASLSGKKIIVPGPAQEIPKKSMCC 221
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 188/217 (86%), Gaps = 1/217 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDHK+V
Sbjct: 7 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RAVPTEDA+EFAQ+E LFF+ETSAL+ATNVE AF+TVLTEI+ I++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
L A E + GN L G +II+PG Q +K CC
Sbjct: 187 LVAG-EDQINGNPASLSGKKIIIPGPAQEIPAKSKCC 222
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 191/217 (88%), Gaps = 2/217 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
NQ+IDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSK+TIGVEFQT+TL IDHKTVKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL + R VPT DA+EFA++E LFF+ETSALEATNVETAF+TVLTEIY I++KK+LTA
Sbjct: 134 KCDLENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA- 192
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
DE+ GNS L G +IIVPG Q +KR CC SS
Sbjct: 193 DENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 229
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 188/219 (85%), Gaps = 1/219 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I HK+V
Sbjct: 7 YGDQSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGA+LVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNKCDL S R VPTEDA+EFAQ+E LFF+ETSALE+TNVETAFLTVLTEI+ I++KK+
Sbjct: 127 LVGNKCDLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKT 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
L D + GN L G +I+VPG Q K CC S
Sbjct: 187 LAGAD-NQTNGNPASLGGKKIVVPGPAQVIPEKSKCCSS 224
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 188/221 (85%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I HK+V
Sbjct: 7 YGDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ RWL+ELRGHADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RAVPTEDA+EFA++E LFF+ETSALEATNVE AFLTVLTEI+ I++KK+
Sbjct: 127 LIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
L A E GN L G RI +PG Q +K CC SS
Sbjct: 187 LVAG-EDQANGNPASLTGKRITIPGPAQEIPAKSNMCCKSS 226
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 187/217 (86%), Gaps = 1/217 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQK+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I HK+V
Sbjct: 7 YGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL + R VPTEDA+EFA++E LFF+ETSALEATNVETAF+TVLTEI+ I++KK+
Sbjct: 127 LIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
L A D GN+ L G +IIVPG Q + CC
Sbjct: 187 LAAGDNQG-NGNAASLSGKQIIVPGTAQEIPKRSMCC 222
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 187/217 (86%), Gaps = 1/217 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQK+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I HK++
Sbjct: 7 YGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSI 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL + R VPTEDA+EFA++E LFF+ETSALEATNVETAF+TVLTEI+ II+KK+
Sbjct: 127 LIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
L A+D NS L G +IIVPG Q + CC
Sbjct: 187 LAASDNQG-NDNSASLSGKKIIVPGPAQEIPKRSMCC 222
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/217 (75%), Positives = 187/217 (86%), Gaps = 1/217 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDHK+V
Sbjct: 7 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RAVPTED EFAQ+E LFF+ETSAL+ATNVE+AF+T+LTEI+ I++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
L A E+ GN L G +II+PG Q SK CC
Sbjct: 187 LIAG-ENQSNGNPASLSGKKIIIPGPAQEIPSKSKCC 222
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/223 (73%), Positives = 189/223 (84%), Gaps = 1/223 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ YGD +QKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TL I
Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD+N
Sbjct: 61 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML GNK DL RAVPTEDA+EFAQ+E LFF+ETSA+EAT +E AFLTVLTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+KK+L A DE+ N L G +I+VPG Q K+ CC S
Sbjct: 181 NKKNLAA-DENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 189/220 (85%), Gaps = 1/220 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQ+IDYVFKVVLIGDSAVGKSQ+LARF+RNEFS+DSK+TIGVEFQT+TL IDHKTV
Sbjct: 7 YGDANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DL + R VPTEDA+EFA++E LFF+ETSAL+ATNVE +F+TVLTEIY I++KK+
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L A DE GNS L G +I++PG Q +K C S
Sbjct: 187 LAA-DESQGNGNSASLLGQKIVIPGPGQEVPAKSSMCCQS 225
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 188/220 (85%), Gaps = 1/220 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQ+IDYVFKVVLIGDSAVGKSQ+LARF+RNEFS+DSK+TIGVEFQT+TL IDHKTV
Sbjct: 7 YGDANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DL + R VPTEDA+EFA++E LFF+ETSAL+ATNVE +F+TVLTEIY ++KK+
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L A DE GNS L G +II+PG Q +K C S
Sbjct: 187 LAA-DESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 338 bits (868), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 188/220 (85%), Gaps = 1/220 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQ+IDYVFKVVLIGDSAVGKSQ+LARF+ NEFS+DSK+TIGVEFQT+TL IDHKTV
Sbjct: 7 YGDANQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DL + R VPTEDA+EFA++E LFF+ETSAL+ATNVE +F+TVLTEIY I++KK+
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L A DE GNS L G +II+PG Q +K C S
Sbjct: 187 LAA-DESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/220 (72%), Positives = 188/220 (85%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD NQKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I HK+V
Sbjct: 7 YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RAVPTEDA+EFA++E LFF+ETSALE+TNVE AF+TVLTEI+ I+++K+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKN 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L A + +++L G +II+PG Q +K C S+
Sbjct: 187 LAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCST 226
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 162/198 (81%), Positives = 182/198 (91%), Gaps = 1/198 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
NQ+IDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSK+TIGVEFQT+TL IDHKTVKAQI
Sbjct: 12 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 71
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+LIGN
Sbjct: 72 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 131
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL S R VPTEDA+EFA++E LFF+ETSALEATNVETAF+TVLTEIY I++KK+LTA
Sbjct: 132 KCDLESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA- 190
Query: 189 DEHDVAGNSNLLKGTRII 206
DE+ GNS L G +II
Sbjct: 191 DENQGNGNSASLSGQKII 208
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 159/224 (70%), Positives = 192/224 (85%), Gaps = 4/224 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N Y +Y+ KIDYVFKVVLIGDSAVGKSQLLARF+RNEFS++SKATIGVEFQT+T+ +D
Sbjct: 1 MANAYNEYDNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HKT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TK+QSFDH+ RWL+ELR HAD N
Sbjct: 61 HKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DL +LR V T+ A+EFA++E+L F+ETSA+E+TNVETAF TVL+EIY+++
Sbjct: 121 IVIMLIGNKSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQN-SASKRGCCLS 223
SKK+L A++ GNS LL GT+I + +D A K GCC S
Sbjct: 181 SKKALLADENQ---GNSPLLPGTKIKLADKDDVIGAKKAGCCSS 221
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/176 (88%), Positives = 171/176 (97%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N++G++NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFS+DSKATIGVEFQT+TL+ID
Sbjct: 1 MANMHGEFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+ARWL+ELRGHADKN
Sbjct: 61 KRTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETS LE+ NVE+AF TVLTEI
Sbjct: 121 IVIMLIGNKSDLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 189/221 (85%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LAR+AR+EFS+DSKATIGVEFQT+TL IDHK+V
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RA+PTEDA+EFA++E LFF+ETSA ATNVE+AF TVLTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186
Query: 185 LTANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCCLSS 224
L A+++ + GN L G +I IVPG Q +K C +S
Sbjct: 187 LAASEDQE-NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 329 bits (843), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 189/221 (85%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LAR+AR+EFS+DSKATIGVEFQT+TL IDHK+V
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RA+PTEDA+EFA++E LFF+ETSA ATNVE+AF TVL+EI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKS 186
Query: 185 LTANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCCLSS 224
L A+++ + GN L G +I IVPG Q +K C +S
Sbjct: 187 LAASEDQE-NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/214 (73%), Positives = 185/214 (86%), Gaps = 3/214 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDHK+VKAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GA+LVYD+TKRQSFDH+ RWL+ELRGHADKNIVIML+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL RAV TEDA+EFA++ENLFF+ETSAL+ATNVE AF TVL+EI++I SKK++ A+
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADP 184
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + A S L G +++VPG Q K CC S
Sbjct: 185 KANGAAPS--LAGKKVVVPGPAQE-IPKSKCCSS 215
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 326 bits (835), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/213 (74%), Positives = 184/213 (86%), Gaps = 3/213 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDHK+VKAQIWD
Sbjct: 7 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWD 66
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GA+LVYD+TKRQSFDH+ RWL+ELRGHADKNIVIML+GNK
Sbjct: 67 TAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKS 126
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAV +EDA+EFA++ENLFF+ETSAL+ATNVE AF TVLTEI++I SKK++ A+ +
Sbjct: 127 DLEEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADPK 186
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ A S L G ++IVPG Q K CC S
Sbjct: 187 ANGAAPS--LAGKKVIVPGPAQE-IPKSKCCSS 216
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 154/213 (72%), Positives = 184/213 (86%), Gaps = 3/213 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDH++VKAQIWD
Sbjct: 7 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWD 66
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GA+LVYD+T+RQSFDH+ RWLDELR HADKNIVIML+GNK
Sbjct: 67 TAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKS 126
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAV TEDA+EFA++ENLFF+ETSAL+ATNVE+AF TVLTEI++I SKK++ + +
Sbjct: 127 DLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEPK 186
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ G + + GT+++VPG Q K CC S
Sbjct: 187 SN--GAAPAMPGTKVLVPGPAQE-IPKSKCCSS 216
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/213 (74%), Positives = 183/213 (85%), Gaps = 3/213 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I+HK+VKAQIWD
Sbjct: 7 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIWD 66
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GA+LVYD+TKRQSFDH+ RWL+ELRGHADKNIVIML+GNK
Sbjct: 67 TAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKS 126
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAV TEDA+EFA++ENLFF+ETSAL+ATNVE AF TVLTEI++I SKK++ A+
Sbjct: 127 DLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADPR 186
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ A S L G ++IVPG Q K CC S
Sbjct: 187 ANGAAPS--LAGKKVIVPGPAQE-IPKSKCCSS 216
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/213 (72%), Positives = 184/213 (86%), Gaps = 3/213 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDH++VKAQIWD
Sbjct: 7 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWD 66
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GA+LVYD+T+RQSFDH+ RWLDELR HADKNIVIML+GNK
Sbjct: 67 TAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKS 126
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAV TEDA+EFA++ENLFF+ETSAL+ATNVE+AF TVLTEI++I SKK++ + +
Sbjct: 127 DLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEPK 186
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ G + + GT+++VPG Q K CC S
Sbjct: 187 SN--GVAPAMAGTKVLVPGPAQE-IPKSKCCSS 216
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/213 (71%), Positives = 184/213 (86%), Gaps = 3/213 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDH++VKAQIWD
Sbjct: 7 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWD 66
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GA+LVYD+T+RQSFDH+ RWLDELR HADKNIVIML+GNK
Sbjct: 67 TAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKS 126
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAV TEDA+EFA++ENLFF+ETSAL+ATNVE++F TVLTEI++I SKK++ + +
Sbjct: 127 DLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVSEPK 186
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ G + + GT+++VPG Q K CC S
Sbjct: 187 SN--GAAPAMPGTKVLVPGPAQE-IPKSKCCSS 216
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 185/214 (86%), Gaps = 3/214 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDHK+VKAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GA+LVYD+TKRQSFDH+ RWL+ELRGHADKNI+IML+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL RAV TEDA+EFA++ENLFF+ETSAL+ATNVE+AF TVL+EI++I SKK++ +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVTDP 184
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + G + L G +++VPG Q K CC S
Sbjct: 185 KAN--GAAPPLAGKKVLVPGPAQE-IPKSKCCGS 215
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/213 (73%), Positives = 183/213 (85%), Gaps = 3/213 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDHK+VKAQIWD
Sbjct: 6 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIWD 65
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GA+LVYD+TKRQSFDH+ RWL+ELRGHADKNIVIML+GNK
Sbjct: 66 TAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKS 125
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAV TEDA+EFA++EN+FF+ETSAL+ATNVE AF TVL+EI++I SKK++ A E
Sbjct: 126 DLEDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKKNIAA--E 183
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G++ L G +++VPG Q K CC S
Sbjct: 184 PKANGSAPSLAGKKVLVPGPAQE-IPKSKCCSS 215
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/182 (84%), Positives = 171/182 (93%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL I HK+V
Sbjct: 7 YGDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ RWL+ELRGHADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RAVPTEDA+EFA++E LFF+ETSALEATNVE AFLTVLTEI+ I++KK+
Sbjct: 127 LIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKN 186
Query: 185 LT 186
L+
Sbjct: 187 LS 188
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/224 (70%), Positives = 187/224 (83%), Gaps = 4/224 (1%)
Query: 2 SNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH 61
S YGD +QKIDYVFK+VLIGDS VGKSQ+L+R+ARNEFS+DSKATIGVEFQT+TL +DH
Sbjct: 3 SGGYGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDH 62
Query: 62 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNI 121
K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWL+ELRGHADKNI
Sbjct: 63 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNI 122
Query: 122 VIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIIS 181
VI+L+GNK DL RA+ TEDA+EFA+ E LFF+ETSAL A NVETAF TVLTEI+ I++
Sbjct: 123 VIILVGNKSDLEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVN 182
Query: 182 KKSLTANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCCLSS 224
KK+L A + + G+ L G +I IVPG Q +K G C +S
Sbjct: 183 KKNLVAGEGN---GDPGSLAGKKIDIVPGPAQVVPTKSGMCCNS 223
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 181/214 (84%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQLLARFAR+EFS+DSKATIGVEFQT+TLSI+ K++KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWL+ELR HADKNIVI+LIGNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAVPTEDA+EFA++E LFF+ETSAL ATNVE +F T++TEIY ++KK+L + +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVEN 192
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ N L G +I++PG Q+ +K C SS
Sbjct: 193 QGDSNNPGSLAGKKIVIPGSGQDIPAKTSTCCSS 226
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 189/224 (84%), Gaps = 4/224 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N Y +Y+ KIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+T+ +D
Sbjct: 1 MANGYNEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HKT+KAQIWDTAGQERYRAVTSAYYRGAVGAM+VYD+TK QSFDH+ RWL+ELR HAD N
Sbjct: 61 HKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DL +LR V T+ A+E+A+++ L F+ETSA+E+TNVETAF TVL+EIY+ +
Sbjct: 121 IVIMLIGNKSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
SKK+L A++ G + LL GT+I + +D +K+ GCC S
Sbjct: 181 SKKALIADENQ---GGAPLLPGTKITLTDKDDVIGTKKAGCCSS 221
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/224 (68%), Positives = 188/224 (83%), Gaps = 4/224 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N Y +Y+ KIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+T+ +D
Sbjct: 1 MANGYHEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HKT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TK+QSFDH+ RWL+ELR HAD N
Sbjct: 61 HKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DL +LR V T+ A+ +A++E L F+ETSA+E+TNVETAF VL+EIY+I+
Sbjct: 121 IVIMLIGNKSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
SK +L A++ G + LL GT+I + +D SKR GCC S
Sbjct: 181 SKNALIADENQ---GGTPLLSGTKINLTDKDDVIGSKRAGCCSS 221
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 182/215 (84%), Gaps = 4/215 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQLLARFAR+EFS+DSKATIGVEFQT+TLSI+ K++KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWL+ELR HADKNIVI+LIGNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAVPTEDA+EFA++E LFF+ETSAL ATNVE +F T++T+IY ++KK+L + +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
+ G+ L G +I++PG Q +K CC SS
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTSS 224
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 316 bits (809), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/223 (67%), Positives = 184/223 (82%), Gaps = 14/223 (6%)
Query: 3 NLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHK 62
N + D NQKIDYVFKVVLIGDSAVGKSQLLARF+RNEF+++SKATIGVEFQT+T+ +DHK
Sbjct: 2 NGFVDMNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHK 61
Query: 63 TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIV 122
T+KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+TKR +F+H+ RWL+EL+ HAD NIV
Sbjct: 62 TIKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIV 121
Query: 123 IMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
+ML+GNK DLG+LRAV E+A++ A+RE LFFMETSALEATNV++AF +VLTEIYRI+SK
Sbjct: 122 VMLVGNKSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSK 181
Query: 183 KSLTANDEHDVAGNSNLLKGTRIIVPGQ----DQNSASKRGCC 221
KSL+ AG S +I +PG + SK GCC
Sbjct: 182 KSLSEG-----AGGSQ-----QIPIPGTTLLLSEKKESKTGCC 214
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/223 (67%), Positives = 184/223 (82%), Gaps = 14/223 (6%)
Query: 3 NLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHK 62
N + D NQKIDYVFKVVLIGDSAVGKSQLLARF+RNEF+++SKATIGVEFQT+T+ +DHK
Sbjct: 2 NGFVDMNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHK 61
Query: 63 TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIV 122
T+KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+TKR +F+H+ RWL+EL+ HAD NIV
Sbjct: 62 TIKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIV 121
Query: 123 IMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
+ML+GNK DLG+LRAV E+A++ A+RE LFFMETSALEATNV++AF +VLTEIYRI+SK
Sbjct: 122 VMLVGNKSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSK 181
Query: 183 KSLTANDEHDVAGNSNLLKGTRIIVPGQ----DQNSASKRGCC 221
KSL+ AG S ++ +PG + SK GCC
Sbjct: 182 KSLSEG-----AGGSQ-----QVPIPGTTLLLSEKKESKTGCC 214
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 182/215 (84%), Gaps = 4/215 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQLLARFAR+EFS+DSKATIGVEFQT+TLSI+ K++KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWL+ELR HADKNIVI+LIGNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAVPTEDA+EFA++E LFF+ETSAL ATNVE +F T++T+IY ++KK+L + +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECD 192
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
+ G+ L G +I++PG Q +K CC SS
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTSS 224
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 181/215 (84%), Gaps = 4/215 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQLLARFAR+EFS+DSKATIGVEFQT+TLSI+ K++KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWL+ELR HADKNIVI+LIGNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAVPTEDA+EFA++E LFF+ETSAL ATNVE +F T++T+IY ++KK+L + +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
+ G+ L G +I++P Q +K CC SS
Sbjct: 193 SNNPGS---LAGKKILIPASGQEIPAKTSTCCTSS 224
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 184/221 (83%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFK+VLIGDS VGKSQ+L+R+ARNEFS+DSKATIGVEFQT+TL IDHK+V
Sbjct: 7 YGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWL+ELR +ADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DL RA+ EDA++FA++E LFF+ETSAL A NVE+AF TVLTEI+ I++KKS
Sbjct: 127 LVGNKSDLEDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKS 186
Query: 185 LTANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCCLSS 224
L A E + G+ L G +I IVPG Q +K C ++
Sbjct: 187 LVAG-EGEGNGDPGSLAGKKIDIVPGPGQVIPTKNKLCCNT 226
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 187/219 (85%), Gaps = 7/219 (3%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
D++ KIDYVFKVVLIGDSAVGKSQLL+RFAR+EF+++SK+TIGVEFQT+T+S+D KT+KA
Sbjct: 3 DFDVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKA 62
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T++Q+F+H+ARWL+ELR HAD N+VIM++
Sbjct: 63 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMV 122
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL + RA+ E+ +EF+++E L+FMETSAL++TNVETAF TVLTEIY+I+SKKSL
Sbjct: 123 GNKSDLSNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLA 182
Query: 187 ANDEHDVAGNSNLLK----GTRIIVPGQDQNSASKRGCC 221
A+D + G +N++ G +I++ + + KR CC
Sbjct: 183 ADDPN--GGLANVMPPVPSGNKILL-DDELTAVKKRACC 218
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 186/219 (84%), Gaps = 7/219 (3%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
D++ KIDYVFKVVLIGDSAVGKSQLL+RFAR+EF+++SK+TIGVEFQT+T+S+D KT+KA
Sbjct: 3 DFDVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKA 62
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T++Q+F+H+ARWL+ELR HAD N+VIM++
Sbjct: 63 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMV 122
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL + R + E+ +EF+++E L+FMETSAL++TNVETAF TVLTEIY+I+SKKSL
Sbjct: 123 GNKSDLSNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLA 182
Query: 187 ANDEHDVAGNSNLLK----GTRIIVPGQDQNSASKRGCC 221
A+D + G +N++ G +I++ + + KR CC
Sbjct: 183 ADDPN--GGLANVMPPVPSGNKILL-DDELTAVKKRACC 218
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ +A+RE L F+ETSALEATNVE AF T+L+EIYRIISKKSLT+
Sbjct: 126 KTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLTSE 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ +N+ +G I+V G + N +K+ CC SS
Sbjct: 186 E----PAPANIKEGKMIVVGGSEAN--TKKPCCSSS 215
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 171/214 (79%), Gaps = 17/214 (7%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+K+DYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL IDHK
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK------- 57
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
YRAVTSAYYRGA+GA+LVYD+TKRQSFDH+ RWL+ELRGHADKNIVIML+GNK
Sbjct: 58 -------YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 110
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL RAV TEDA+EFA++ENLFF+ETSAL+ATNVE AF TVL+EI++I SKK++ A+
Sbjct: 111 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADP 170
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + A S L G +++VPG Q K CC S
Sbjct: 171 KANGAAPS--LAGKKVVVPGPAQE-IPKSKCCSS 201
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 172/212 (81%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA+GA+LVYD+TK +FD+++RWL ELR HAD NIVIMLIGNK DL
Sbjct: 70 GQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDAQ +A++E L F+ETSALEATNVE AF T+L+EIYRIISKKSL N E
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSL--NSEEP 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A N N+ +G I+V + N +K+ CC SS
Sbjct: 188 AAAN-NIKEGKTIVVGESEAN--TKKACCSSS 216
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 174/216 (80%), Gaps = 6/216 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV TEDAQ +A++E L F+ETSALEATNVE AF T+L EIYRIISKKSL++ND
Sbjct: 127 TDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSLSSND 186
Query: 190 EHDVAGNSNLLK-GTRIIVPGQDQNSASKRGCCLSS 224
+N++K G I V G + + +K CC SS
Sbjct: 187 PA-----ANIIKEGKTITVGGAPEPNTNKPSCCTSS 217
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 171/210 (81%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA+GA+LVYD+TK +FD+++RWL ELR HAD NIVIMLIGNK DL
Sbjct: 70 GQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDAQ +A++E L F+ETSALEATNVE AF T+L+EIYRIISKKSL N E
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSL--NSEEP 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
A N N+ +G I+V + N +K+ CCL
Sbjct: 188 AAAN-NIKEGKTIVVGESEAN--TKKACCL 214
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 170/214 (79%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL +D KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVI++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVILMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV ED Q A+RE+L F+ETSALEATNVE AF T+LTEIY IISKK+L A
Sbjct: 126 KSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKALAA- 184
Query: 189 DEHDVAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
+ AGNS L +GT I V D + +KR CC
Sbjct: 185 --QEAAGNSTLPGQGTTINVA--DTSGNTKRSCC 214
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/215 (65%), Positives = 174/215 (80%), Gaps = 5/215 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ TVKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV TEDAQ ++++E L F+ETSALEATNVE AF T+L EIYRIISKKSL++N+
Sbjct: 127 TDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKSLSSNE 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
++N+ + I V G Q++ASK CC SS
Sbjct: 187 ----PASANIKESMTITV-GGPQSNASKPSCCTSS 216
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 178/225 (79%), Gaps = 4/225 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ G+ ++ IDY+FK+V+ GDS VGKSQLL RF +NEF + SK TIGVEF T+T+ +D
Sbjct: 1 MAQWQGNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK VKAQIWDTAGQERY+A+T+AYYRGA GA+L YD+TK+Q+FDH+ +WLDELR HADKN
Sbjct: 61 HKLVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
I++ML+GNK DL SLRAVPTE A++FAQ+E LFF+ETSAL+++NVE+AF+ +L+++YR +
Sbjct: 121 ILVMLVGNKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTV 180
Query: 181 SKKSLTANDEHDVAGNSNL-LKGTRIIVPGQD---QNSASKRGCC 221
S+K + + NL L+GT+I VP Q+ QN+ + CC
Sbjct: 181 SRKHILVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCC 225
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/215 (64%), Positives = 174/215 (80%), Gaps = 6/215 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ FA++E L F+ETSALEATNVE AF T+L EIYRIISKK+L+++
Sbjct: 126 KTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSD 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
D + + +G ++V G D N +K+ CC S
Sbjct: 186 D----PAPAGIKEGKTLVVDGSDTN--TKKTCCSS 214
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 168/214 (78%), Gaps = 3/214 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQIW
Sbjct: 10 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 69
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD+TK +FD++ RWL ELR HAD NIVIMLIGNK
Sbjct: 70 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNK 129
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV TEDAQ +A++E L F+ETSALEATNVE AF T L EIYRIISKKSL+ +
Sbjct: 130 TDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTAN 189
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
E A N +K + I G + + + + CC S
Sbjct: 190 EPAAAAN---IKEGKTIAIGGSETTNTNKPCCTS 220
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/225 (58%), Positives = 178/225 (79%), Gaps = 4/225 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ G+ ++ IDY+FK+V+ GDS VGKSQLL RF +NEF + SK TIG+EF T+T+ +D
Sbjct: 1 MAQWQGNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK VKAQIWDTAGQERY+A+T+AYYRGA GA+L YD+TK+Q+FDH+ +WLDELR HADKN
Sbjct: 61 HKLVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
I++ML+GNK DL SLRAVPTE A++FAQ+E LFF+ETSAL+++NVE+AF+ +L+++YR +
Sbjct: 121 ILVMLVGNKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTV 180
Query: 181 SKKSLTANDEHDVAGNSNL-LKGTRIIVPGQD---QNSASKRGCC 221
S+K + + NL L+GT+I VP Q+ QN+ + CC
Sbjct: 181 SRKHILVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCC 225
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF +DSK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIML GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V EDAQ A++E L F+ETSALEA+NVE AF T+L +IY+IISKK+LTA
Sbjct: 126 KSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKALTA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A ++ L +GT I + N +KR CC
Sbjct: 185 --QEAANSTGLPQGTTITIANLSSN-INKRACC 214
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 138/208 (66%), Positives = 172/208 (82%), Gaps = 4/208 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
D +KIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF DSK+TIGVEFQT+T++I+ K +KA
Sbjct: 24 DVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIKA 83
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+ARW++ELR HAD +IVIML+
Sbjct: 84 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLV 143
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTEDA EFA+ + LFF ETSAL NVE+AFL +L EI R++SKK+L
Sbjct: 144 GNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALE 203
Query: 187 ANDEHDVAGNSNL--LKGTRI-IVPGQD 211
+ G++N+ LKGT++ I+ G +
Sbjct: 204 CGLGKE-NGDTNVASLKGTKVDIILGPE 230
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 175/216 (81%), Gaps = 4/216 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ +A++E L F+ETSALEA NVE AF T+L+E+YRIISKKS++++
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
N+N+ +G I V +++A K+ CC SS
Sbjct: 186 ---QTTANANIKEGQTIDVAATSESNA-KKPCCSSS 217
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D Q A++E L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AG S +GT I V D ++ +KRGCC
Sbjct: 185 --QEAAGTSLPGQGTTINVA--DSSANTKRGCC 213
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 174/215 (80%), Gaps = 4/215 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLIGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV TEDAQ +A++E L F+ETSALEA NVE AF T+L+EIYRIISKKS++++
Sbjct: 127 TDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISSD- 185
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ N+N+ +G I V + S +K+ CC SS
Sbjct: 186 --QASANANVKEGQTIDVAASSE-SNTKKPCCSSS 217
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 171/220 (77%), Gaps = 5/220 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
D +KIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF DSK+TIGVEFQT+T++I+ K +KA
Sbjct: 24 DVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKA 83
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+ARW++ELR HAD +IVIML+
Sbjct: 84 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLV 143
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTEDA EFA+ + LFF ETSAL NVE+AFL +L EI R++SKK+L
Sbjct: 144 GNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALE 203
Query: 187 A-----NDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
N +++V + N K I+ P + + K C
Sbjct: 204 CGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKLSSC 243
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 175/216 (81%), Gaps = 4/216 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ +A++E L F+ETSALEA NVE AF T+L+EIYRIISKKS++++
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISSD 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
N+++ +G I V +++A K+ CC SS
Sbjct: 186 ---QTTANASIKEGQTIDVAATSESTA-KKPCCSSS 217
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 170/214 (79%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTEDA++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 182
Query: 189 DEHDVAGNSNLLKGTRIIVP-GQDQNSASKRGCC 221
+ G N L R +V + Q++ +K+GCC
Sbjct: 183 E-----GGQNPLGERRQVVEISKTQDTETKQGCC 211
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 165/213 (77%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D Q A+RE L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AG L G + D + +KRGCC
Sbjct: 186 E----AGVGTTLPGQGTTINVGDASGNTKRGCC 214
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 165/213 (77%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FKVVLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ A+RE L F+ETSALEA NVE AF T+L +IY IISKK+L A
Sbjct: 126 KSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G L +GT I V N A R CC
Sbjct: 186 EANSSTG---LPQGTTINVSNMSSN-AGNRSCC 214
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 166/199 (83%), Gaps = 1/199 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T++I K +KAQI
Sbjct: 23 HEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQI 82
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ARW++ELR HAD +IVIML+GN
Sbjct: 83 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGN 142
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL RAVP+EDA EF++ + LFF ETSAL NVETAF VL EIY ++SKK+L +
Sbjct: 143 KADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECD 202
Query: 189 DEHDVAGNSNLLKGTRIIV 207
+ + SN LKG++I V
Sbjct: 203 GKSNGCDASN-LKGSKIDV 220
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 167/212 (78%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RW+ EL+ H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTEDA+ FA+REN FFMETSALEA NVE AF VLT+IYR++SKK+L D D
Sbjct: 130 RHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A KG I V G+D SA K+ C SS
Sbjct: 188 PAAPP---KGQTINVGGKDDVSAVKKSACCSS 216
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 170/213 (79%), Gaps = 3/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TKTL++D K VKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D NIV+MLIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL L AVPTED + FA+RE+L+FMETSALEATNVE AF VLT+IYRI+SK+++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D +G + KG I V +D + + GCC
Sbjct: 187 DSGSSSGLPS--KGQTINVK-EDSSVLKRFGCC 216
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 171/212 (80%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ID KTVKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LV+D+TKRQ+FD++ RWL ELR HAD NIV+M++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VP ED+Q F+++E+L F+ETSALEA NVE AF TVL+EI++I+SKK+L A +
Sbjct: 130 NHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESAS 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
G S ++GT I V + S + +G C SS
Sbjct: 190 ANGRS--MQGTTINVA---EPSTNTKGSCCSS 216
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 166/199 (83%), Gaps = 1/199 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T++I K +KAQI
Sbjct: 19 HEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQI 78
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ARW++ELR HAD +IVIML+GN
Sbjct: 79 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGN 138
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL RAVP+EDA EF++ + LFF ETSAL NVETAF VL EIY ++SKK+L +
Sbjct: 139 KADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECD 198
Query: 189 DEHDVAGNSNLLKGTRIIV 207
+ + SN LKG++I V
Sbjct: 199 GKSNGCDASN-LKGSKIDV 216
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 165/213 (77%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D Q A+RE L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A +L G + D + +KRGCC
Sbjct: 186 E----AAVGTILPGQGTTINVGDASGNTKRGCC 214
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 165/213 (77%), Gaps = 3/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FKVVLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ A+RE L F+ETSALEA NV+ AF T+L +IY IISKK+L A
Sbjct: 126 KSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++ L +GT I V N+ R CC
Sbjct: 185 --QEATSSTGLPQGTTINVSNMAGNAGGNRSCC 215
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D +G + L ++ Q+ +K+GCC
Sbjct: 183 D----SGQAGLGDRRPVVDINPSQDPETKQGCC 211
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 171/214 (79%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 182
Query: 189 DEHDVAGNSNLLKGTRIIVP-GQDQNSASKRGCC 221
+ G+ N+L G R ++ + ++ K+GCC
Sbjct: 183 E-----GSQNVLGGERKVLEISKSADAEQKKGCC 211
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 164/213 (76%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D Q A+RE L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A L G + D + +KRGCC
Sbjct: 186 E----AAVGTTLPGQGTTINVGDASGNTKRGCC 214
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 168/215 (78%), Gaps = 4/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+ L ID KTVKAQI
Sbjct: 135 NNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQI 194
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TK+QSFD + RWL ELRGHAD NIV+M++GN
Sbjct: 195 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGN 254
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+VP ED + F+++E L F+ETSALEA NVE AF T+L+EI++ +SKK+L A
Sbjct: 255 KSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQ 314
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G S ++GT I V + ++ +K CC S
Sbjct: 315 ASASTNGRS--MQGTTINV--AESSTVTKGSCCSS 345
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RW+ ELR H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTEDA+ FA+REN FFMETSALEA NVE AF VLT+IY ++SKK+L D+
Sbjct: 130 RHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKALDIGDD-- 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ +G I V G+D SA K+ C SS
Sbjct: 188 ---PAAPPRGQTISVGGKDDVSAVKKSACCSS 216
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 172/215 (80%), Gaps = 4/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ +A++E L F+ETSALEATNV+ AF T+L+EIYRIISKK+L++
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTLSSE 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ A ++ G I+V G D S K CC S
Sbjct: 186 ES---AAPVSVKDGKTIVVGGPDP-STKKTTCCSS 216
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 167/214 (78%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL +D KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV ED A++E L F+ETSALEATN+E AF T+LTEIY IISKK+L A
Sbjct: 126 KSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKTLAA- 184
Query: 189 DEHDVAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
+ A NS + +GT I V D + +K+GCC
Sbjct: 185 --QEAAANSTVPGQGTTINVA--DASGNTKKGCC 214
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 168/210 (80%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+T+ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+ +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V T+DAQ F+++E L F+ETSALEATNVE AF ++LTEIYRI+SKK+L + D
Sbjct: 130 KHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKALASEDPVL 189
Query: 193 VAGNSNLLKGTRIIV-PGQDQNSASKRGCC 221
V +G IIV P QD N+ K+ CC
Sbjct: 190 VGPG----EGKAIIVGPEQDANT-KKKACC 214
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 163/203 (80%), Gaps = 1/203 (0%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+KIDYVFKVV+IGDSAVGK+QLL+RF +NEF DSK+TIGVEFQT+T++I K VKAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIW 74
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAMLVYD+TKR +FDH+ARW++ELR HAD +IVI LIGNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNK 134
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL RAVPTEDA EFA+ + LFF ETSAL NV+ AF +L EIY +ISKKSL
Sbjct: 135 ADLVDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECGG 194
Query: 190 EHDVAGNSNLLKGTRI-IVPGQD 211
+S +L+G++I ++ G D
Sbjct: 195 HKTNGADSVMLRGSKIDVISGSD 217
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 166/209 (79%), Gaps = 6/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+T+ ++ KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V TEDAQ FA++E L F+ETSALEATNVE AF T+L EI+RIISKK+L + +
Sbjct: 130 KHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKALASEE--- 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A + + +G I+V D N +K+ CC
Sbjct: 187 -AAGAGIKEGKTIVVADPDTN--TKKACC 212
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 168/212 (79%), Gaps = 4/212 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RN+F+++SK+TIGVEF TK+L ID K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D N+V+MLIGNKCDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L VPTED + FA+RE+L+FMETSAL+ATNVE+AF VL++IYRI+SK+S+ A D
Sbjct: 131 RHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEAG---D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ S L + +D +S KR GCC S
Sbjct: 188 IGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 169/210 (80%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + +A+RE+L+FMETSALEATNVE AF VLT+IYRI+SKKS+ DE
Sbjct: 131 RHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEG- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A +S KG RI V +D SA KR GCC
Sbjct: 190 -AASSVPAKGERINV--KDDASALKRVGCC 216
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 170/209 (81%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA+RE+L+FMETSALEATNV+ AF VLT+IYRI+SKK++ A D D
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEAGD--D 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A ++ KG +I V G+D ++ + GCC
Sbjct: 189 GAASAVPSKGEKIDV-GKDVSAMKRVGCC 216
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++D+K+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D +G + L ++ Q+ +K+GCC
Sbjct: 183 D----SGQAGLGDRRPVVDINPSQDPETKQGCC 211
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/215 (62%), Positives = 169/215 (78%), Gaps = 7/215 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K+ ++D++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTEDA+ FA +L F+ETSAL++TNVE AF T+LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALDGG 182
Query: 189 DEHDVA--GNSNLLKGTRIIVPGQDQNSASKRGCC 221
D+H V+ G+S L I P +NS CC
Sbjct: 183 DQHQVSQPGSSQPLH----ITPTA-ENSTKDTKCC 212
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 168/215 (78%), Gaps = 4/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+ L ID KTVKAQI
Sbjct: 6 NNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TK+QSFD + RWL ELRGHAD NIV+M++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+VP ED + F+++E L F+ETSALEA NVE AF T+L+EI++ +SKK+L A
Sbjct: 126 KSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G S ++GT I V + ++ +K CC S
Sbjct: 186 ASASTNGRS--MQGTTINVA--ESSTVTKGSCCSS 216
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 169/213 (79%), Gaps = 6/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G +L +I P + Q+S K+GCC
Sbjct: 183 E-----GGQQVLDRRPVIDPSK-QDSEQKQGCC 209
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 169/210 (80%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + +A+RE+L+FMETSALEATNVE AF VLT+IYRI+SKKS+ DE
Sbjct: 131 RHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEG- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A +S KG RI V +D SA KR GCC
Sbjct: 190 -AASSVPAKGERINV--KDDASALKRVGCC 216
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEI+RI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D N L +++ + Q+ SK+GCC
Sbjct: 183 DSA-----QNPLSDRKVVEITKTQDPESKQGCC 210
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D AG + L ++ + ++ +K+GCC
Sbjct: 183 D----AGQTVLGDRRDMVRIDESEDPKTKQGCC 211
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 168/209 (80%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL I+ KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+Q+F+++ RWL ELR HAD NIVIM++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VP ED Q A++E L F+ETSALEA NVE AF T+L++I++IISKK+L A +
Sbjct: 130 NHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKALAA---QE 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
AG+ +GT I V D + +K+GCC
Sbjct: 187 AAGSGPPTQGTTINVA--DSSGNTKKGCC 213
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/197 (67%), Positives = 161/197 (81%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T+ I K +KAQI
Sbjct: 2 QEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQI 61
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRAVTSAYYRGA+GAMLVYD+TKR +FDH+ARW++ELR HAD +IVIMLIGN
Sbjct: 62 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGN 121
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTEDA EFA+ + LFF ETSAL NV+ AF +L EIY +I KKSL
Sbjct: 122 KADLVDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLECG 181
Query: 189 DEHDVAGNSNLLKGTRI 205
+ + A ++ L+G++I
Sbjct: 182 NGNPHAADAITLRGSKI 198
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 168/213 (78%), Gaps = 6/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G +L +I P + Q+S K GCC
Sbjct: 183 E-----GGQQVLDRRPVIDPSK-QDSEQKPGCC 209
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 168/207 (81%), Gaps = 2/207 (0%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
+ + KIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF DSK+TIGVEFQT+T++I+ K +KA
Sbjct: 16 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKA 75
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD++KRQSFDH+ARW+DELR HAD +IVIMLI
Sbjct: 76 QIWDTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLI 135
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL- 185
GNK DL R V EDA EFA+ + LFF ETSAL NVE+AF +L EI+R+ISK+SL
Sbjct: 136 GNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLE 195
Query: 186 TANDEHDVAGNSNLLKGTRI-IVPGQD 211
N + + N LKG++I ++ G +
Sbjct: 196 CGNGKANADNNLATLKGSKIDVISGAE 222
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 164/209 (78%), Gaps = 6/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELRGH D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEVGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
L KG I V D ++ K GCC
Sbjct: 190 ----GALPKGQTINVK-DDVSAVKKVGCC 213
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 167/211 (79%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL I+ KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+Q+F+++ RWL ELR HAD NIVIM++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VP ED Q A++E L F+ETSALEA NVE AF T+L +I++IISKK+L A +
Sbjct: 130 NHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAA---QE 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
AG+ +GT I V D +KRGCC S
Sbjct: 187 AAGSGPPTQGTTINVT--DSAVNTKRGCCSS 215
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 163/213 (76%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VL GDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D Q A+RE L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A L G + D + +KRGCC
Sbjct: 186 E----AAVGTTLPGQGTTINVGDASGNTKRGCC 214
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 167/212 (78%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TED+ FA+REN FFMETSALE+ NVE+AF VLT+IYR++SKK+L D+
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDP- 179
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ L KG I V +D SA K+G C S+
Sbjct: 180 ----AALPKGQTINVGSRDDVSAVKKGGCCSA 207
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA+RE+L+FMETSALEATNV++AF VLT+IYRI+SKK++ DE
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSKKAMETGDE-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V +D ++ + GCC S
Sbjct: 189 AAASAVPSKGEKIDVS-KDVSAMKRVGCCSS 218
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 170/213 (79%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEI+RI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D ++N L +++ + +S K+GCC
Sbjct: 183 D-----SSANQLGDRKVVEITKTPDSEKKQGCC 210
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL GDS VGKS LL+RF RN+FS DS+ATIGVEF T+++ D K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ TE+A+ FA+REN FFMETSALEA NV+ AF VLT+IYR++SKK+L A D+
Sbjct: 131 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L KG I V G+D SA K+ GCC
Sbjct: 191 TA----LPKGQMINVGGRDDISAVKKPGCC 216
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----AALPKGQTINVGTKDDVSAVKKVGCC 215
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 168/213 (78%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D + + GT I + +++ +K GCC
Sbjct: 183 D----GAQATIGAGTNISLSKPAEDATAKSGCC 211
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 166/209 (79%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR VPT+DAQ F+++E L F+ETSALE+TNVE AF +LTEIYRI+SKK+L A++E
Sbjct: 130 KHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL-ASEEST 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G +GT I+ + K+GCC
Sbjct: 189 TEGPG---QGTNIVPLDSNSPDLKKKGCC 214
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 169/215 (78%), Gaps = 6/215 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S+K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
D + + + GT I + + A+K G CC
Sbjct: 183 D----SAQATIASGTNITLTPPPSDEAAKGGGKCC 213
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA++E+L+FMETSALEATNVE AF VLT+IY I+SKK++ +D D
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSD--D 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V G+D ++ K GCC S
Sbjct: 189 GAASAVPSKGEKIDV-GKDVSAMKKGGCCSS 218
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 169/210 (80%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + FA+RE+L+FMETSALEATNVE AF VL++IY I+SKK++ A +
Sbjct: 131 RHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKKAVEAGE--- 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+G+S+ + + ++ +S KR GCC
Sbjct: 188 -SGSSSAVPSIGQTINVKEDSSVFKRFGCC 216
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL I+ +T+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+Q+F+++ RWL ELR HAD NIVIM++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VP ED Q A++E L F+ETSALEA NVE AF T+L +I++IISKK+L A +
Sbjct: 130 NHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAA---QE 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
AG+ +GT I V D +KRGCC S
Sbjct: 187 AAGSGPPTQGTTINVT--DSAVNTKRGCCSS 215
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEI+RI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D ++N L +++ + +S K GCC
Sbjct: 183 D-----SSANQLGDRKVVEITKTPDSEKKPGCC 210
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 164/209 (78%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+RE+ FFMETSALE+ NVE AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ L KG I V D ++ K GCC
Sbjct: 189 ---PAALPKGQTINVGKDDVSAVKKVGCC 214
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 168/207 (81%), Gaps = 2/207 (0%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
+ + KIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF DSKATIGVEFQT+T++I+ K +KA
Sbjct: 19 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKA 78
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+ARW++ELR HAD +IVIMLI
Sbjct: 79 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLI 138
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI-YRIISKKSL 185
GNK DL R V +EDA EFA+ + LFF ETSAL NVE+AFL +L EI R++SK+SL
Sbjct: 139 GNKGDLVDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSL 198
Query: 186 TANDEHDVAGNSNLLKGTRI-IVPGQD 211
+ + N LKG++I ++ G +
Sbjct: 199 SDCNHGKKTNGGNSLKGSKIDVISGPE 225
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D+++KVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H + NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALEA NVE AF VL++IYR+ SKK+L D+H
Sbjct: 131 RHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDH- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D S K+ GCC S
Sbjct: 190 ----TTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 170/213 (79%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS GKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEGE 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+G +++ + +II + Q++ +K GCC
Sbjct: 183 -----SGGASVGERRQIIDIEKTQDTENKGGCC 210
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 167/215 (77%), Gaps = 4/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + DY+FK+VLIGDS VGKS + +RF RNEF ++SK+TIGVEF T+ L ID KTVKAQI
Sbjct: 6 NNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TK+QSFD + RWL ELRGHAD NIV+M++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+VP ED + F+++E L F+ETSALEA NVE AF T+L+EI++ +SKK+L A
Sbjct: 126 KSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G S ++GT I V + ++ +K CC S
Sbjct: 186 ASASTNGRS--MQGTTINVA--ESSTVTKGSCCSS 216
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 168/211 (79%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL I+ KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+Q+F+++ RWL ELR HAD NIVIM++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VP ED Q A++E L F+ETSALEA NVE AF TVL++I++IISKK+L A +
Sbjct: 130 NHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAA---QE 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
AG+ +GT I V D ++ K GCC S
Sbjct: 187 AAGSGPPGQGTTINVA--DSSANMKGGCCSS 215
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA++E+L+FMETSALEATNVE AF VLT+IY ++SKK++ +D D
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSKKAMETSD--D 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V G+D ++ K GCC S
Sbjct: 189 GAASAVPSKGEKIDV-GKDVSAMKKGGCCSS 218
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 168/209 (80%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + +A++E+L FMETSALEATNVE AF VLT+IYRI SKK + A ++
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
GN+++ KG +I V D ++ K GCC
Sbjct: 189 --GNASVPKGEKIEVK-NDVSALKKLGCC 214
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 168/211 (79%), Gaps = 4/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL I+ KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LV+D+TKRQ+FD++ RWL ELR HAD NIV+M++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VP ED F+++E L F+ETSALEA NVE AF TVL+EI++I+SKK+L A +
Sbjct: 130 NHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESAS 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G S ++GT I V + +A+K CC S
Sbjct: 190 TNGRS--MQGTTINVA--EAPAATKGSCCSS 216
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 170/221 (76%), Gaps = 5/221 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ GD + DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID
Sbjct: 1 MAGYKGD--DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNID 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D N
Sbjct: 59 AKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+MLIGNK DL L AVPTED + FA++E+L+FMETSALEATNVE AF VL++IYRI+
Sbjct: 119 IVVMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIV 178
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SK+++ A A +S + + I D + K GCC
Sbjct: 179 SKRTVEAGKN---ASSSAVPSKGQTINVKDDSSVLKKIGCC 216
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 169/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA+RE+L+FMETSALEATNV+ AF VLT+IYRI+SKK++ DE
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGDEG- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V +D ++ + GCC S
Sbjct: 190 -AASAVPSKGEKIDVS-KDVSAMKRVGCCSS 218
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 170/214 (79%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++++D K VKAQI
Sbjct: 6 DEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +++++ RWL EL+ H D NIV+ML+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVMLVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TED Q F++RE L+FMETSALE+TNVE AF +LT+IYR++SKK+L
Sbjct: 126 KSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKALDVG 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
++ A KG I V G+D +A+K+ GCC
Sbjct: 186 EDPSAAP----AKGQTINVGGKDDVTATKKVGCC 215
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIM +GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VL++IYR++S+K+L D+
Sbjct: 131 RHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----AALPKGQTINVGSKDDVSAVKKVGCC 215
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VLT+IY ++SKK+L D+
Sbjct: 131 RHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKALEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----AALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE+ FFMETSALEA NVE+AF VLT+IYR++SKK+L D D
Sbjct: 130 RHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
A +G I V G+D SA K+ GCC S
Sbjct: 188 PAAPP---RGQTINVGGKDDVSAVKKAGCCSS 216
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 171/214 (79%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S+K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKAL--- 179
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
++ + +N+ GT I + + A+K G CC
Sbjct: 180 -DNGESAQANIGAGTNISLSKPADDGAAKGGKCC 212
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 169/215 (78%), Gaps = 6/215 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S+K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
D + + + GT I + + A+K G CC
Sbjct: 183 D----SAQATIGSGTNITLTPPPSDEAAKGGGKCC 213
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 167/214 (78%), Gaps = 8/214 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV ED Q A++E L F+ETSALEA N+E AF T+LTEIY IISKK+L A
Sbjct: 126 KSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
+ +SNL +GT I V D ++ +R CC
Sbjct: 186 E-----ASSNLPGQGTTINVA--DASANQRRSCC 212
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TED+ FA+REN FFMETSALE+ NVE AF VLT+IYR++SKK+L D+
Sbjct: 131 RHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----TALPKGQTIDVGSRDDVSAVKKSGCC 215
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 167/213 (78%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D +++E L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AG S +GT I V D + +K+GCC
Sbjct: 186 EA--TAGASVPGQGTTINVA--DTSGNTKKGCC 214
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 164/212 (77%), Gaps = 4/212 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+ +F+++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V TEDA+ F +RE L F+ETSALEATNVE AF +LTEIY I+SKK+L + D
Sbjct: 130 RHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALASEDGPA 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A S GT I V + K CC S+
Sbjct: 190 AAPTS----GTAIKVTEAAPEAKKKSTCCSSA 217
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 174/219 (79%), Gaps = 9/219 (4%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ +++ DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KTVK
Sbjct: 2 GNRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNKCDL LRAVPT++A+ FA++ NL F+ETSAL++TNVETAF +LTEIYRI+S+KSL
Sbjct: 122 VGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSL 181
Query: 186 TANDEHDVAGNSNLLK--GTRIIVPGQ-DQNSASKRGCC 221
+GNS G+ I + +NS +K+ CC
Sbjct: 182 PD------SGNSGAGPDDGSTIDIGSTVTENSGNKKPCC 214
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 168/209 (80%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL +D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + +A++E+L FMETSALEATNVE AF VLT+IYRI SKK + A ++
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
GN+++ KG +I V D ++ K GCC
Sbjct: 189 --GNASVPKGEKIEVK-NDVSALKKLGCC 214
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA++E+L+FMETSALEATNVE +F VLT+IY +ISKK++ +D D
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAMETSD--D 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V G+D ++ K GCC S
Sbjct: 189 GAASAVPSKGEKIDV-GKDVSAMKKGGCCSS 218
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 167/214 (78%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D +N+ GT + + +A K G CC
Sbjct: 183 D----GAQANIAAGTSLSLSKPADENADKGGKCC 212
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 169/211 (80%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+Q+F+++ RWL ELR HAD NIVIM++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V ED Q A++E L F+ETSALEA NVE AF TVL++I++IISKK+L A +
Sbjct: 130 NHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAA---QE 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
AG+ +GT I + D ++ +KRGCC S
Sbjct: 187 AAGSGPPGQGTTINIA--DPSANTKRGCCSS 215
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 163/209 (77%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA FA+REN FFMETSALE+ NVE AF VLT+I+R++S+K+L D+
Sbjct: 131 RHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDVGDD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ L KG I V D ++ K GCC
Sbjct: 189 ---PAALPKGQTITVGKDDVSAVKKVGCC 214
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 164/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL GDS VGKS LL+RF RN+FS DS++TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D N VIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ TE+ ++FA+REN FFMETSALEA NVE AF VLT+IYR++SKK+L A D+
Sbjct: 131 NHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPT 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L KG I V +D SA K+ GCC
Sbjct: 191 TA----LPKGQMINVGSRDDVSAVKKSGCC 216
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 167/214 (78%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIM +GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VL++IYR++S+K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
D+ + L KG I V +D SA K+ GCC
Sbjct: 187 DDP-----AALPKGQTINVGSKDDVSAVKKVGCC 215
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 74 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 133
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 134 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 193
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA+RE LFFMETSALEATNVE AF VLT+IY I+SKK+L +++ +
Sbjct: 194 RHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSKKALETSEQAN 253
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G++ +G +I V G+D ++ + GCC S
Sbjct: 254 --GSAVPSQGEKIDV-GKDVSAVKRGGCCSS 281
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 163/213 (76%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV EDAQ A++E L F+ETSALEA NVE AF T+L +IY IISKK+L A
Sbjct: 126 KADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ N L GT I V N +KR CC
Sbjct: 185 --QEATSNPGLPHGTTINVANISGNY-NKRSCC 214
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 167/213 (78%), Gaps = 6/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V ED + A++E L F+ETSALEATN+E AF T+L+EIY IISKK+L A
Sbjct: 126 KSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AGN L G + D ++ +++GCC
Sbjct: 185 --QEAAGN---LPGQGTAINISDSSATNRKGCC 212
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 168/207 (81%), Gaps = 2/207 (0%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
+ + KIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF +SK+TIGVEFQT++++I+ K +KA
Sbjct: 16 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKA 75
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+ARW+DELR HAD +IVIMLI
Sbjct: 76 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLI 135
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R V EDA EFA+ + LFF ETSAL NVE++F +L EI+R+ISK+SL
Sbjct: 136 GNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLE 195
Query: 187 A-NDEHDVAGNSNLLKGTRI-IVPGQD 211
N + + N LKG++I ++ G +
Sbjct: 196 CDNGKANADNNVATLKGSKIDVISGAE 222
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 167/212 (78%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TED+ FA+RE+ FFMETSALE+ NVE+AF VLT+IYR++SKK+L D+
Sbjct: 131 RHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ L KG I V +D SA K+G C S+
Sbjct: 189 ---PAALPKGQTINVGSRDDVSAVKKGGCCSA 217
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 168/207 (81%), Gaps = 2/207 (0%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
+ + KIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF +SK+TIGVEFQT++++I+ K +KA
Sbjct: 16 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKA 75
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+ARW+DELR HAD +IVIMLI
Sbjct: 76 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLI 135
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R V EDA EFA+ + LFF ETSAL NVE++F +L EI+R+ISK+SL
Sbjct: 136 GNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLE 195
Query: 187 A-NDEHDVAGNSNLLKGTRI-IVPGQD 211
N + + N LKG++I ++ G +
Sbjct: 196 CDNGKANADNNVATLKGSKIDVISGAE 222
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDAQ FA++EN FFMETSALE+ NVE AF VLT+IYR++ +K+L ++
Sbjct: 131 RHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D SA K+ GCC S
Sbjct: 190 ----AALPKGQTINVGNKDDVSAMKKVGCCSS 217
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 167/215 (77%), Gaps = 7/215 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + DY+FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+EFA + L F+ETSAL+A+NVE AF LTEIYRI+S K++
Sbjct: 123 KSDLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIEQG 182
Query: 189 DEHDVAGNSNLLKGTRIIV-PGQDQNSASKRG-CC 221
+ G +GT I + P ASK+G CC
Sbjct: 183 EPSQGPG-----QGTSIPLGPSHPPGDASKKGQCC 212
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE+ FFMETSALEA NVE AF VLT+IYR++SKK+L D+
Sbjct: 130 RHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKALDIGDDP- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ +G I V G+D SA K+ GCC S
Sbjct: 189 ----AAPPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA F++REN +FMETSALE+ NVE+AF VLT+IYR++SKK+L D+
Sbjct: 131 RHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 189 ---PAALPKGQTINVGSRDDVSAVKKAGCC 215
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 166/212 (78%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ ++ K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RW+ ELR H D NIV+ML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTEDA+ FA+R+N FFMETSALEA NVE AF VL +IYR++SKK+L D D
Sbjct: 130 RHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A +G I V G+D SA K+ C SS
Sbjct: 188 PAAPP---RGHTINVGGKDDVSAVKKSACCSS 216
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 174/219 (79%), Gaps = 9/219 (4%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ +++ DY+F+VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KTVK
Sbjct: 2 GNRDEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNKCDL LRAVPT++A+ FA++ NL F+ETSAL++TNVETAF +LTEIYRI+S+KSL
Sbjct: 122 VGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSL 181
Query: 186 TANDEHDVAGNSNLLK--GTRIIVPGQ-DQNSASKRGCC 221
+GNS G+ I + +NS +K+ CC
Sbjct: 182 PD------SGNSGAGPDDGSTIDIGSTVTENSGNKKPCC 214
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 164/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL GDS VGKS LL+RF RN+FS DS+ATIGVEF T+++ D K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ TE+A+ FA+REN FFMETSALEA NV+ AF VLT+IYR++SKK+L A D+
Sbjct: 131 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L KG I V +D SA K+ GCC
Sbjct: 191 TA----LPKGQMINVGSRDDISAVKKPGCC 216
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 165/212 (77%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TED+ FA+REN FFMETSALE+ NVE AF VLT+IYR++SKK+L D+
Sbjct: 131 RHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D SA K+ GCC S
Sbjct: 190 ----AALPKGQTINVGSRDDVSAVKKSGCCSS 217
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 169/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +++++ +WL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TEDA+ FA+ E+L+FMETSALEATNV+ AF VLT+IY I+SKK++ ND D
Sbjct: 131 RHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETND--D 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ + KG +I + +D + K GCC S
Sbjct: 189 AAASAVIAKGEKIDIS-KDVSEVKKGGCCSS 218
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 172/216 (79%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KTVK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E D++ ++N++ I VP + + K CC
Sbjct: 182 SERQESDMSPSNNVVN---IQVPPTE--NKPKMQCC 212
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 169/221 (76%), Gaps = 5/221 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ GD + DY+FK+V IGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L ID
Sbjct: 1 MAGYKGD--DEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDID 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D N
Sbjct: 59 AKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+MLIGNK DL L AVPTED + FA++E+L+FMETSALEATNVE AF VL++IYRI+
Sbjct: 119 IVVMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIV 178
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SK+++ A + A +S + + I D + K GCC
Sbjct: 179 SKRAVEAGNN---ASSSAVPSKGQTINVKDDSSVLKKIGCC 216
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 167/213 (78%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK++LIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D A+++ L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AG S +GT I V D + +K+GCC
Sbjct: 186 EA--TAGASVPGQGTTINVA--DTSGNTKKGCC 214
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KMQCC 213
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KMQCC 213
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +F+++ RWL ELR HAD+NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTEDA++FA+ +L F+ETSAL+ATNVE AF +LTEIY+I+S K+
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G+ N L G I + + +K GCC
Sbjct: 183 PSGSTEGHQN-LSGQSISLSQTANDPQAKSGCC 214
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 167/209 (79%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+T +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + +A++E+L FMETSALEATNVE AF VLT+IYRI SKK + A ++
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
GN+++ KG +I V D ++ K GCC
Sbjct: 189 --GNASVPKGEKIEVK-NDVSALKKLGCC 214
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 165/211 (78%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +N F++DSK+TIGVEF T+TL +++K +KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIV+MLIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKTDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V EDA FA+ E LFF+ETSAL+ATNVE AF TVL EIYRIISKK L++ E
Sbjct: 136 RHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSS--EES 193
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G+ NL +G I V + + + R CC S
Sbjct: 194 GLGSGNLREGQSIQVSATNSGALTSR-CCSS 223
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 167/207 (80%), Gaps = 2/207 (0%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
+ + KIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF DSKATIGVEFQT+T++I+ K +KA
Sbjct: 19 NVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKA 78
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+ARW++ELR HAD +IVIMLI
Sbjct: 79 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLI 138
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI-YRIISKKSL 185
GNK D R V +EDA EFA+ + LFF ETSAL NVE+AFL +L EI R++SK+SL
Sbjct: 139 GNKGDFVDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSL 198
Query: 186 TANDEHDVAGNSNLLKGTRI-IVPGQD 211
+ + N LKG++I ++ G +
Sbjct: 199 SDCNHGKKTNGGNSLKGSKIDVISGPE 225
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 47 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 106
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 107 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 166
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 167 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 226
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 227 SDRRENDMSPSNNVVP---IHVPPTTENK-PKVQCC 258
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/226 (57%), Positives = 172/226 (76%), Gaps = 5/226 (2%)
Query: 1 MSNLYGDYNQK-IDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI 59
M+ GD + + IDY+FKVV+IGDS VGKSQLL RF RNEF + SKATIGVEF TKT+ +
Sbjct: 1 MAQFQGDLDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLM 60
Query: 60 DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADK 119
DHK VKAQIWDTAGQERY+A+T+AYYRGA GA+L YD+TKR +F+H+ +WLDEL HADK
Sbjct: 61 DHKLVKAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADK 120
Query: 120 NIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI 179
NIV+ML+GNK DL S+R VP E+A++ A+++ FF+ETSAL++ NVE AFL +L++IY
Sbjct: 121 NIVVMLVGNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVT 180
Query: 180 ISKKSLTANDEHDVAGNSNL-LKGTRIIVPGQD---QNSASKRGCC 221
+SKK +TA+ NL +GT+++V Q+ Q S + CC
Sbjct: 181 MSKKHITADGRERNWDKVNLEFEGTKLLVSSQEPECQKSKKRFSCC 226
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 117 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 176
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 177 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 236
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE+ FFMETSALE+ NVE+AF VLT+IYR++SKK+L D D
Sbjct: 237 RHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD--D 294
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
A +G I V G+D SA K+ GCC S
Sbjct: 295 PAAPP---RGQTINVGGKDDVSAVKKSGCCSS 323
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 166/211 (78%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS GKS LL+RF RNEFS++SK+TIGVEF T+++S+D KTVKAQIWDTA
Sbjct: 226 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 285
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ +++RWL ELR HAD NIVIML+GNK DL
Sbjct: 286 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 345
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L ++D D
Sbjct: 346 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSD--D 403
Query: 193 VAGNSNLLKGTRIIV-PGQDQNSASKR-GCC 221
V S G I V P D A+K+ GCC
Sbjct: 404 VIKPSG---GETITVQPSADDGGATKKNGCC 431
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 166/211 (78%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF+RNEF+++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 12 DYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D+NIVIML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VLTEIY+++ +K+L D+
Sbjct: 132 RHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDP- 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ L KG I V D ++ K GCC S
Sbjct: 191 ----AALPKGQTINVGKDDVSAVKKVGCCSS 217
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 163/213 (76%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++KRQ++D++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D G +I + A CC
Sbjct: 183 DAAQAPTG-----GVKIDMAPSGTPDAKGNKCC 210
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 169/214 (78%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 182
Query: 189 DEHDVAGNSNLLKGTRIIVP-GQDQNSASKRGCC 221
+ G+ +L R ++ + ++ K+GCC
Sbjct: 183 E-----GSGPVLGNDRKVLEISKSADAEQKKGCC 211
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA++E+L+FMETSALEATNVE AF VLT++Y ++SKK++ +D D
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSKKAMETSD--D 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V G+D ++ K GCC S
Sbjct: 189 GAASAVPSKGEKIDV-GKDVSAMKKGGCCSS 218
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 47 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 106
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 107 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 166
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 167 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 226
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D + ++N++ I VP +N K CC
Sbjct: 227 SDRRENDTSPSNNVVP---IHVPPTTENK-PKVQCC 258
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 166/209 (79%), Gaps = 11/209 (5%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQTKT++I+ K +KAQIW
Sbjct: 4 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIW 63
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ARW++ELR HAD +IVIMLIGNK
Sbjct: 64 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNK 123
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL R V TEDA EFA+ + LFF ETSA NV +AFL +L EI +++SK+SL N+
Sbjct: 124 GDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLECNN 183
Query: 190 ------EHDVAGNSNLLKGTRI-IVPGQD 211
HDVA LKG +I I+ G +
Sbjct: 184 GIKGNGNHDVAA----LKGEKIDIISGSE 208
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 167/214 (78%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSA +A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + GT I + ++SA+K G CC
Sbjct: 183 DTPSMPQT-----GTNIALSNPTEDSAAKNGKCC 211
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 164/213 (76%), Gaps = 3/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV T+DAQ A+RE L F+ETSALEA NVE AF T+L +IY+I+SKK+L A
Sbjct: 126 KSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A ++L GT I V + K CC
Sbjct: 185 --QGAASTTSLPHGTTINVSNMSGSVEKKSACC 215
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +SK CC
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGQKSSKLQCC 215
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ EDA FAQR+N FFMETSALE+ NVE AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L +G I V +D SA K+ GCC S
Sbjct: 190 ----AALPRGQTINVGSRDDVSAVKKAGCCSS 217
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 168/214 (78%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + + + GT I + + ASK G CC
Sbjct: 183 D----SAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L++D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA++E+L+FMETSALEATNVE +F VLT+IY I+SKK++ A D
Sbjct: 131 RHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKAMEAGD--G 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A S KG +I V +D ++ K GCC S
Sbjct: 189 TAAASVPPKGEKIDVS-KDVSAVKKAGCCSS 218
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE+ FFMETSALE+ NVE+AF VLT+IYR++SKK+L D D
Sbjct: 130 RHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
A +G I V G+D SA K+ GCC S
Sbjct: 188 PAAPP---RGQTINVGGKDDVSAVKKSGCCSS 216
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 170/216 (78%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KTVK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E D++ ++N++ + Q + K CC
Sbjct: 182 SERQESDMSPSNNVVN-----IQVQPTENKPKMQCC 212
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 3 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 123 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 182
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 183 SDRRENDMSPSNNVVP---IHVPPTTENKP-KMQCC 214
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 166/209 (79%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V T+DAQ F+++E L F+ETSALE+TNVE AF +LTEIYRI+SKK+L A++E+
Sbjct: 130 KHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL-ASEENT 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G +GT I+ + K+GCC
Sbjct: 189 TEGPG---QGTNIVPLDSNAPDLKKKGCC 214
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 166/213 (77%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVY MTKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +EDAQ A++E+L F+ETSALEA NVE AF T+L +IY+IIS+K+L A
Sbjct: 126 KSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A ++L GT I V N K+ CC
Sbjct: 185 --QEAASTTSLPHGTTINVSNLSSN-VEKKTCC 214
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D N VIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+RE+ FFMETSALE+ NVE AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVGDD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
++ L KG I V +D SA K+ GCC S
Sbjct: 189 ---STYLPKGQTINVGSRDDVSAVKKAGCCSS 217
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 162/202 (80%), Gaps = 10/202 (4%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQTKT++I+ K +KAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIW 74
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ARW++ELR HAD +IVIMLIGNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNK 134
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL R V TEDA EFA+ + LFF ETSA NV +AFL +L EI +++SK+SL N+
Sbjct: 135 GDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLECNN 194
Query: 190 ------EHDVAGNSNLLKGTRI 205
HDVA LKG +I
Sbjct: 195 GIKGNGNHDVAA----LKGEKI 212
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 166/209 (79%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V T+DAQ F+++E L F+ETSALE+TNVE AF +LTEIYRI+SKK+L A++E+
Sbjct: 130 KHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL-ASEENT 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G +GT I+ + K+GCC
Sbjct: 189 TEGPG---QGTNIVPLDSNAPDLKKKGCC 214
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T+DA+ FA+REN FFMETSALE+ NV+ AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----AALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 171/218 (78%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ +++ DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KTVK
Sbjct: 2 GNRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNKCDL LRAVPT++A+ FA++ NL F+ETSAL++TNVETAF +LTEIYRI+S++ L
Sbjct: 122 VGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQL 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
E +V N ++ + +N +R CC S
Sbjct: 182 REPAEDEVTIRPNNVETINVKPTVSTEN--VRRQCCNS 217
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ HD + +N++ + + P D ++K CC
Sbjct: 182 SDRSAHDESPGNNVVDIS--VPPTTDGQKSNKLQCC 215
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D SK CC
Sbjct: 182 AERSAHDESPGNNVVDIS--VPPTTDGQRGSKLQCC 215
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 169/211 (80%), Gaps = 8/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K +KAQ+WDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D N+VIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ F++REN+FFMETSAL+ATNVE AF VLT+IYR++S+K+L D
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKAL------D 184
Query: 193 VAGNS-NLLKGTRIIVPGQDQNSASK-RGCC 221
G+ +L KG I + +D +A K GCC
Sbjct: 185 GTGDPMSLPKGQTIDIGNKDDVTAVKSSGCC 215
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RW+ EL+ H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA++EN FFMETSALE+ NVE AF VLT+IY ++SKK+L D D
Sbjct: 130 RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A KG I V G+D SA K+ C SS
Sbjct: 188 PAAPP---KGQTINVGGKDDVSAVKKSACCSS 216
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +F+++ RWL ELR HAD+NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTEDA++FA+ +L F+ETSAL+ATNVE AF +LTEIY+I+S K+
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G+ N L G I + + +K GCC
Sbjct: 183 PSGSNEGHQN-LSGQSISLSQTANDPQAKSGCC 214
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 34 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 93
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 94 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 153
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE+ FFMETSALE+ NVE+AF VLT+IYR++SKK+L D D
Sbjct: 154 RHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD--D 211
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
A +G I V G+D SA K+ GCC S
Sbjct: 212 PAAPP---RGQTINVGGKDDVSAVKKSGCCSS 240
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 164/212 (77%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL EL+ H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV +EDA+ FA+REN FFMETSALEA NVE AF VL++IYR++SKK+L D D
Sbjct: 130 RHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A KG I V +D SA K+ C SS
Sbjct: 188 PAAPP---KGKTISVGSKDDVSAVKKSACCSS 216
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D SK CC
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGQKGSKLQCC 215
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 168/214 (78%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D +N+ GT I + + ++K G CC
Sbjct: 183 D----GAQANIGAGTNISLSKPADDGSAKGGKCC 212
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 167/214 (78%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + + GT I + + ASK G CC
Sbjct: 183 D----GAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 167/214 (78%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D +++ G I + +SA K G CC
Sbjct: 183 D----GAQASIGTGPSIALSKPADDSAEKSGKCC 212
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D ++K CC
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGQKSNKLQCC 215
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 149/175 (85%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ID KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
KCDL LRAV ED Q A+RE L F+ETSALEATN+E AF T+LTEIY IISKK
Sbjct: 126 KCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKK 180
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T DA+ FA+REN FFMETSALE+ NV+ AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----AALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 162/209 (77%), Gaps = 6/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+ +F+++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V T+D+Q F ++E L F+ETSALE+TNVE AF +LTEIY I+SKK+L + D+
Sbjct: 130 RHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKALASEDKPQ 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
KGTRI+V K CC
Sbjct: 190 PD------KGTRIVVSETQPEEKKKSACC 212
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 168/213 (78%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIML GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMLAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V EDAQ A++E L +ETSALEA+NVE AF T+L +IY+IISKK+L A
Sbjct: 126 KTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A ++ L +GT I + G + +K+ CC
Sbjct: 185 --QEAANSTGLPQGTTINI-GNLSTNINKKACC 214
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE FFMETSALE+ NVE+AF VLT+IYR++SKK+L D D
Sbjct: 130 RHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
A +G I V G+D SA K+ GCC S
Sbjct: 188 PAAPP---RGQTINVGGKDDVSAVKKAGCCSS 216
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 171/217 (78%), Gaps = 6/217 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LR+VPT++A+ FA+R +L F+ETSAL+ TNVETAF +LTEIYRI+S++ +
Sbjct: 122 VGNKSDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPM 181
Query: 186 -TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ DE GNS ++ I P + N+ SK CC
Sbjct: 182 HDSPDEDSPPGNSGPIQ----ISP-TEPNAGSKSNCC 213
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 166/213 (77%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV EDA+ A++E L F+ETSALEA N+E AF ++L +IY IISKK+L A
Sbjct: 126 KSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A ++ L +GT I V N +KR CC
Sbjct: 185 --QEAANSTGLPQGTTINVANLSGN-VNKRPCC 214
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/215 (60%), Positives = 169/215 (78%), Gaps = 7/215 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIV--PGQDQNSASKRGCC 221
D + + GT I + P D+++ S + CC
Sbjct: 183 D----GAQATIGAGTNISLSKPADDESAKSGK-CC 212
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 166/212 (78%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T+DA+ FA+REN FFMETSALE+ NV+ AF VLT+IYR++SKK+L D+
Sbjct: 131 RHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSKKTLEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ L KG I V +D SA K+ C S+
Sbjct: 190 ----AALPKGQTINVGSKDDVSAVKKVGCYSA 217
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 166/209 (79%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L++D K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + FA+RE+L+FMETSALEATNVE AF VL++IYRI+SKK++ A +
Sbjct: 131 RHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAGEGGS 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++ + + +D + + GCC
Sbjct: 191 SSSVPSVGQTINV---KEDSSVLKRFGCC 216
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 166/209 (79%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V T+DAQ F+++E L F+ETSALE+TNVE AF +LTEIYRI+SKK+L A++E+
Sbjct: 130 KHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL-ASEENT 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G +GT IVP K+GCC
Sbjct: 189 TEGPG---QGTN-IVPLDSNAPDLKKGCC 213
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
HD + +N++ + + P D +K CC S
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQRPNKLQCCQS 217
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 168/212 (79%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H + NIV+ML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDAQ FA+RE L+F+ETSALE+TNVE AF VLT+IYRI+SKK+L ++++
Sbjct: 130 RHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKALDVSEDNA 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A +G I V D + K GCC +S
Sbjct: 190 AAPP----QGQTINVK-DDVTATKKVGCCSTS 216
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D+++KVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H + NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALEA NVE AF VL++IYR+ SKK+L D+
Sbjct: 131 RHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D S K+ GCC S
Sbjct: 190 ----ATLPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNKCDL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF +LTEIY I+S+K +
Sbjct: 122 VGNKCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D NS + ++ P D + K CC
Sbjct: 182 -----KDAPQNSEISSQPIVVGPTVDSDVKKKPQCC 212
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 172/218 (78%), Gaps = 5/218 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KTVK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ ++D++ ++N++ + Q + K CC S
Sbjct: 182 SDRRDNDMSPSNNVVS-----IQVQPTENKPKMQCCQS 214
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRG VGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +SK CC
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGQKSSKLQCC 215
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 165/209 (78%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V +DAQ FA++E L F+ETSALE+TNVE AF +LTEIYRI+SKK+L A++E+
Sbjct: 130 RHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL-ASEENA 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G +GT I+ + K+GCC
Sbjct: 189 TEGPG---QGTNIVPLDSNSPDLKKKGCC 214
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 172/216 (79%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE+AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++D + + + +K I + D + K+ CC
Sbjct: 182 RNDTDNDPSPSGDNVKP--ISIAPTDSSDTRKKQCC 215
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T+DA+ FA+REN FFMETSALE+ NV+ +F VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----AALPKGQTINVGSRDDVSAVKKVGCC 215
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T+DA+ FA+REN FFMETSALE+ NV+ AF VLT+IYR++S+K+L D+
Sbjct: 131 RHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDDP- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ L KG I V +D SA K+ GCC
Sbjct: 190 ----AALPKGQTINVGSRDDVSAVKKSGCC 215
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 62 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 121
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 122 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 181
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 182 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 241
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D SK CC
Sbjct: 242 ADRAAHDESPGNNVVDIS--VPPTTDGQKPSKLQCC 275
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT+D++ FA++ NL F+ETSAL+ATNVE AF +LTEIY I+S+K++ +D
Sbjct: 130 RHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTIVNDDHVA 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SN+ T + P + + K GCC
Sbjct: 190 KVPTSNV--QTITVAPSEATDDKKKGGCC 216
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 9 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 68
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 128
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 129 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 188
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 189 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 222
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T++ + FA+RE+L+FMETSALE+TNVE AF VLT+IYRI+SK+S+ A D+
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD-- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
S KG +I + +D SA K+G C S
Sbjct: 190 --AGSGPGKGEKINI--KDDVSAVKKGGCCS 216
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T++ + FA+RE+L+FMETSALE+TNVE AF VLT+IYRI+SK+S+ A D+
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD-- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
S KG +I + +D SA K+G C S
Sbjct: 190 --AGSGPGKGEKINI--KDDVSAVKKGGCCS 216
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPTKLQCC 215
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV ED + FA+REN +FMETSALE+TNVE AF VL++IYRI+SKK+L ++
Sbjct: 130 RHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGEDPA 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
+ KG I V +D +A K+ GCC
Sbjct: 190 AVPS----KGQTIHVGNKDDVTAMKKVGCC 215
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTGNKP-KMQCC 213
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 165/214 (77%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K +KAQI
Sbjct: 7 DEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVLKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++M RWL ELR H D NIV+ML+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVMLVGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TE+A FA+RE FFMETSALE+ NVE AF VLT+IY ++SKK+L
Sbjct: 127 KADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSKKALEIG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
D+ + L KG I V +D SA K+ GCC
Sbjct: 187 DD-----PAALPKGQTINVGSRDDVSAVKKDGCC 215
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 166/213 (77%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +DAQ A++E L F+ETSALEA NVE AF T+L +IY IISKK+L A
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A + NL GT I V G + +KR CC
Sbjct: 186 E----AASINLPHGTTINV-GDLSGNMNKRTCC 213
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 170/212 (80%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL I+ KTVKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LV+D+TKRQ+FD++ RWL ELR HAD NIV+M++GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VP ED+Q F+++E L F+ETSALEA NVE AF TVL+EI++I+SKK+L A +
Sbjct: 130 NHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESAA 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
G S ++GT I V + S + +G C SS
Sbjct: 190 ANGRS--MQGTTINVA---EPSTNAKGSCCSS 216
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 173/210 (82%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L +D K +KAQIWDTA
Sbjct: 15 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTA 74
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ RWL ELR H D++IV+ML+GNK DL
Sbjct: 75 GQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLVGNKSDL 134
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T+DA+EFA+ E+++FMETSAL+ATNV+++F VLT+IY+I+SKK++ A++E
Sbjct: 135 RHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEASEE-- 192
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
G + KG +I V +D SA KR GCC
Sbjct: 193 --GAAAPGKGEKINV--KDDVSAMKRVGCC 218
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL+ TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 170/214 (79%), Gaps = 7/214 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TKT ++ K VKAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+L+YD+T+ +F++ ARWL ELRGH D NIV+MLIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL L AV TE+A+ FA+RE+L+FMETSAL+ATNVE+AF VL++I++I+SK+S+
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRSV--- 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
D G+S L G + ++ S KR GCC
Sbjct: 184 ---DGGGDSTELPGKGETINVKEDGSVLKRMGCC 214
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D + CC
Sbjct: 182 AERSAHDESPGNNVVDIS--VPPTTDSQRGGRLQCC 215
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 167/211 (79%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA+RE+L+FMETSALEATNV+ AF VL +IY I+SKK++ D +
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGD--N 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V +D ++ + GCC S
Sbjct: 189 AAASAVPSKGEKIDV-NKDVSAKKRVGCCSS 218
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 168/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T ++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
HD + +N++ + + P D +K CC S
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQRPNKLQCCQS 217
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 165/211 (78%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS GKS LL+RF RNEFS++SK+TIGVEF T+++S+D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ +++RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L ++D D
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSD--D 185
Query: 193 VAGNSNLLKGTRIIV-PGQDQNSASKR-GCC 221
V S G I V P D +K+ GCC
Sbjct: 186 VIKPSG---GETITVQPSADDGGQTKKNGCC 213
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/207 (62%), Positives = 164/207 (79%), Gaps = 5/207 (2%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
V VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
LRAVPT++A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L D +
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGD----S 178
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRGCC 221
G + L G R I + ++ SK+GCC
Sbjct: 179 GQAPLSSG-RTIEVSKAPDTESKQGCC 204
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 166/209 (79%), Gaps = 2/209 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + HD
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHD 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +N++ + + P D ++K CC
Sbjct: 189 ESPGNNVVDIS--VPPTTDGQKSNKLQCC 215
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 153/175 (87%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L++D K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
L AVPTED + FA+RE+L+FMETSALEATNVE AF VL++IYRI+SKK++ A
Sbjct: 131 RHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEA 185
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++ NVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D SK CC
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGQKGSKLQCC 215
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 168/211 (79%), Gaps = 4/211 (1%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
+FK+V++GDS VGKSQLL RF +NEF + SK TIGVEF T+T+ +DHK VKAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERY+A+T+AYYRGA A+L YD+TK+Q+FDH+ +WLDELR H DKNI++ML+GNK DL S
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
LRAVPTE A++FAQ+E LFF+ETSAL+++NVE+AF+ +L+++YR +S+K + +
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLILVDGHESNW 180
Query: 195 GNSNL-LKGTRIIVPGQD---QNSASKRGCC 221
NL L+GT+I VP Q+ QN+ + CC
Sbjct: 181 DKVNLELEGTKIKVPSQEPECQNAKKRFNCC 211
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 167/211 (79%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + FA+RE+L+FMETSALEATNV+ AF VL +IY I+SKK++ D +
Sbjct: 131 RHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGD--N 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
A ++ KG +I V +D ++ + GCC S
Sbjct: 189 AAASAVPSKGEKIDV-NKDVSAMKRVGCCSS 218
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 167/214 (78%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPT++A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + + GT I + + ASK G CC
Sbjct: 183 D----GAQATIGAGTNISLSKAADDEASKGGKCC 212
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 164/209 (78%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+T+ ++ KTVKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIML GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV ++DAQ A++E L F+ETSALEA NVE AF T+L +IY+IISKK+L A +
Sbjct: 130 NHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKALAAQES-- 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A +++ GT I V + K+ CC
Sbjct: 188 -ASTTSVPHGTTINVSNM-SGTVEKKSCC 214
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 159/212 (75%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+T+ +D KTVKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K+ +FD++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T+ AQ FA+ NL FMETSAL+A+NVE AF ++LT+IYRI+S K+L N
Sbjct: 130 KHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKALDQNQ--- 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
L G R + GCC S+
Sbjct: 187 ---GPGLTPGPRETITVSKSEEKKNGGCCASN 215
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 168/212 (79%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D +IVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
G LRAV TEDA+ +A++E+ FF+ETSALE+TNVE AF VLT+IY ++S+K+L DE
Sbjct: 131 GHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGDE-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ + KG I V G+D SA K G C S+
Sbjct: 189 ---AATVPKGQTINV-GKDDVSAIKIGGCCSA 216
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 170/210 (80%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK VLIGDS VGKS LL+RF +NEF ++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 16 DYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ARWL ELR H D +IV+ML+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNKSDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED +E+A+ E+L+FMETSAL+ATNVE AF VLT+IY+ +SKK++ A+D+
Sbjct: 136 RHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTVEASDD-- 193
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
G++ +KG +I V +D SA KR GCC
Sbjct: 194 --GSNAPIKGEKINV--KDDVSALKRIGCC 219
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 33 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 92
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 93 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 152
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 153 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 212
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 213 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 246
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 171/225 (76%), Gaps = 5/225 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ GD ++ IDY+FKVV++GDS VGKSQLL RF RNEF + SKATIGVEF TKT+ +D
Sbjct: 1 MAQWQGDSDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK VKAQIWDTAGQERY+A+T+AYYRGA GA+L YD+T RQSFDH+ +WLDELR HAD N
Sbjct: 61 HKVVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-N 119
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
I++ML+GNK DL S RAVP E+A++FA+++ LFF+ETSAL++ NVE+AFL +L++IY +
Sbjct: 120 IIVMLVGNKSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATV 179
Query: 181 SKKSLTANDEHDVAGNSNL-LKGTRIIVPGQD---QNSASKRGCC 221
KK + A NL L+G +I V Q+ Q + + CC
Sbjct: 180 GKKHIIAEGAELNWDKVNLELEGIKIKVSSQEAECQKAKRRFDCC 224
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADCAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 168/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ HD + +N++ + + P D K CC S
Sbjct: 182 SDRSGHDESPGNNVVDIS--LPPTTDSQRGGKLPCCQS 217
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADCAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 169/219 (77%), Gaps = 2/219 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF VLTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
HD + +N++ + + P D +K CC S
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTSDGQKGNKIQCCQSP 218
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ET+AL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 170/218 (77%), Gaps = 7/218 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVETAF +LTEIY+I+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQI 181
Query: 186 --TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +DE+ + N I V D ++ K+ CC
Sbjct: 182 RDSPDDENSPSNNVQT-----ITVAPTDNSADKKQKCC 214
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 50 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 109
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 110 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 169
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 170 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 229
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D ++K CC
Sbjct: 230 ADRSAHDESPGNNVVDIS--VPPTTDGQKSNKLQCC 263
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 168/214 (78%), Gaps = 7/214 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TKT ++ K VKAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+L+YD+T+ +F++ ARWL ELRGH D NIV+MLIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL L AV TE+A+ FA+RE+L+FMETSAL+ATNVE AF VLT+I++I+SK+S+
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSV--- 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
D G S L G + ++ S KR GCC
Sbjct: 184 ---DGGGESADLPGKGETINVKEDGSVLKRMGCC 214
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 166/211 (78%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK V+IGDS VGKS LL+RF +NEF ++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 16 DYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ARWL ELR H D +IV+ML+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVVMLVGNKSDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED QE+A+ E+L+FMETSAL+ATNV+ AF VLT+IYRI S+K++ A D+
Sbjct: 136 RHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGDD-- 193
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G+S KG I V D +S + GCC S
Sbjct: 194 --GSSAPSKGENINVK-DDVSSLKRAGCCSS 221
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 167/214 (78%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPT++A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + + GT I + + A+K G CC
Sbjct: 183 D----GAQATIGAGTNISLSKAADDEAAKGGKCC 212
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 166/211 (78%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK V+IGDS VGKS LL+RF +NEF ++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 16 DYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ARWL ELR H D +IV+ML+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNKSDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED QE+A+ E+L+FMETSAL+ATNV+ AF VLT+IYRI S+K++ A D+
Sbjct: 136 RHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGDD-- 193
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G+S KG I V D +S + GCC S
Sbjct: 194 --GSSAPSKGENINVK-DDVSSLKRAGCCSS 221
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 166/214 (77%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + + G I + +SA K G CC
Sbjct: 183 D----GPQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L +D K +KAQIWDTA
Sbjct: 15 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTA 74
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ RWL ELR H D++IV+ML+GNK DL
Sbjct: 75 GQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVMLVGNKSDL 134
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T+DA+EFA+ E+++FMETSAL+ATNV+++F VLT+IY+I+SKK++ +E
Sbjct: 135 RHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEVPEEGA 194
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
VA KG +I V +D SA KR GCC
Sbjct: 195 VAPG----KGEKINV--KDDVSAMKRVGCC 218
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 168/218 (77%), Gaps = 3/218 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
HD + +N++ I VP +K CC S
Sbjct: 182 ADRSAHDESPGNNVVD---ISVPPTTDGQKNKLPCCQS 216
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 168/220 (76%), Gaps = 18/220 (8%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR++ ED + A++E L F+ETSALEA+N+E AF ++L+EIY I+SKK+L A
Sbjct: 126 KSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQ-------DQNSASKRGCC 221
+ AG+ + VPGQ D + ++RGCC
Sbjct: 185 --QEAAGS--------MAVPGQGTAINISDTYATNRRGCC 214
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ WL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TEDA+ FA++E+L+FMETSALEATNVE AF VLT+I+ I+SKK++ A E
Sbjct: 131 RHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASE-- 188
Query: 193 VAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
++N+ KG +I + G+D ++ K GCC
Sbjct: 189 ---SANVPSKGDKIDI-GKDVSAVKKGGCC 214
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 165/218 (75%), Gaps = 12/218 (5%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D+KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+L YD+TK Q+FD++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPT+DA+ FA L F+ETSAL+A+NVE AF LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKAL--- 179
Query: 189 DEHDVAGNSNLLKGTRIIV-----PGQDQNSASKRGCC 221
++D +GT I + PG D A K CC
Sbjct: 180 -DNDAGSAGAPGQGTSIPLSSSNPPGGD---AKKGQCC 213
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 168/212 (79%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T++ + FA+RE+L+FMETSALE+TNVE AF VLT+IYRI+SK+++ A ++
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRAVEAGED-- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
S KG +I + +D SA K+G C SS
Sbjct: 190 --AASGPGKGEKINI--KDDVSAVKKGGCCSS 217
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 164/212 (77%), Gaps = 3/212 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q DY+FK+VLIGDS VGK+ +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQIW
Sbjct: 7 QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LR+V ED Q A+ E L F+ETSALEATNVE AF TVL EIY IISKK+L A
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQ- 185
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A ++ + G + +D + A KRGCC
Sbjct: 186 --EAAAANSAIPGQGTTINVEDTSGAGKRGCC 215
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+ +K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D SK CC
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGLKGSKFQCC 215
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 161/219 (73%), Gaps = 17/219 (7%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQIW
Sbjct: 7 QDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LR+V ED Q A+ E L F+ETSALEATNVE AF TVL EIY IISKK+L A +
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQE 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQ-------DQNSASKRGCC 221
+PGQ D + A KRGCC
Sbjct: 187 AAAAN----------SAIPGQGTTINVGDTSGAGKRGCC 215
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T++L+ID KTVKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K Q++ ++ RWL ELR HAD+NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN-DEH 191
LRAVPT++A+ F+ L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL + D
Sbjct: 128 KHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADPI 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ N+L + P D + S CC
Sbjct: 188 KPSTGDNIL-----VTPSVDPQAQSGSKCC 212
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 167/211 (79%), Gaps = 3/211 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +N F++DSK+TIGVEF T+T+ +D KT+KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIV+MLIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKIDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V EDA FA+ E LFF+ETSAL+ATNVE AF TVL EIYRIISKK L++ +
Sbjct: 136 RHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPLSSEESG- 194
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+G+ NL +G I V + ++ + R CC S
Sbjct: 195 -SGSGNLREGQSIQVSATNSSALTSR-CCSS 223
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 161/209 (77%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H + NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA FA+RE FFMETSALE+ NVE AF VLT+IY ++S+K+L D+
Sbjct: 131 RHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKALDVGDD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ L KG I V D ++ K GCC
Sbjct: 189 ---PAALPKGQTINVGKDDVSAVKKVGCC 214
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
HD + +N++ + + P D +K CC S
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGQKGNKLQCCQS 217
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 175/216 (81%), Gaps = 6/216 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ +A++E L F+ETSALEATNVE AF T+L+EIYRI+SKKSL++
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSE 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ +++ G I+V G + + +K+ CC SS
Sbjct: 186 ----ESAPASIKDGKTIVVGGPEPD--TKKTCCSSS 215
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ +L F+ETSAL++TNVETAF +LTEIY I+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ D + ++N+ T + P D ++ K CC
Sbjct: 182 RDSPGDDESPSTNV--QTITVAPTTDADTKKKLACC 215
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 164/212 (77%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS+++K+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDAQ FA+RE +FMETSALE+ NVE +F VLT+ YR++S+K L D+
Sbjct: 131 RHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPT 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
V L KG I + +D SA K+ GCC S
Sbjct: 191 V-----LPKGQTIDIGSKDDVSAVKKAGCCSS 217
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD +IVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 166/210 (79%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+T+ +D KT+KAQIWDTA
Sbjct: 10 DFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +FD++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+RAVP +DAQ+FA++E L FMETSALE+TNVE +F ++LTEIY+I+ +KSL A +
Sbjct: 130 SHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAEEAAS 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
+ +GT I V + A KR CCL
Sbjct: 190 AGPS----QGTPINVSDA-ETIAKKRSCCL 214
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF ++LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ H+ + +N++ + + P D +K CC S
Sbjct: 182 SDRSAHEDSPGNNVVDIS--VPPTMDGQRGNKLPCCQS 217
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L +D K +KAQIWDTA
Sbjct: 15 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTA 74
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ RWL ELR H D++IV+MLIGNK DL
Sbjct: 75 GQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLIGNKSDL 134
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T+DA+E+A+ E+++FMETSAL+ATNV+ AF VLT+IY+I+SKK++ A +E
Sbjct: 135 RHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKKTVEALEE-- 192
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
G + KG +I V +D SA KR GCC
Sbjct: 193 --GAAGPGKGEKINV--KDDVSAMKRVGCC 218
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 12 IDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDT 71
+ YV VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+K+QIWDT
Sbjct: 8 VSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 67
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 127
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
L LRAVPT++A++FA NL F+ETSAL+A+NVE AF +LTEI+RI+S K+L + D
Sbjct: 128 LRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESGD-- 185
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
++N L +++ + +S K GCC
Sbjct: 186 ---SSANQLGDRKVVEITKTPDSEKKPGCC 212
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 165/211 (78%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS GKS LL+RF RNEFS++SK+TIGVEF T+++S+D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ +++RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L ++D D
Sbjct: 128 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSD--D 185
Query: 193 VAGNSNLLKGTRIIV-PGQDQNSASKR-GCC 221
V S G I V P D +K+ GCC
Sbjct: 186 VIKPSG---GETITVQPSADDGGQTKKNGCC 213
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 168/219 (76%), Gaps = 2/219 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S++ +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
HD + +N++ + + P D +K CC S
Sbjct: 182 ADRSAHDDSPGNNVVDIS--VPPTMDGQRGNKLPCCQSP 218
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYR +TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 166/214 (77%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + + G I + +SA K G CC
Sbjct: 183 D----GPQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 166/211 (78%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K+QS+ H+ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ FA NL F+ETSA++A+NVE+AF +LT+IYRI+S K+L ++ D
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSG--D 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
G ++ T + P D + S G CC
Sbjct: 186 SVGPTS--GSTITVTPTADDGAKSNAGGKCC 214
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 163/211 (77%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKT-LSIDHKTVKAQIWDT 71
DY+FKVVL GDS VGKS LL+RF RN+FS DS++TIGVEF T+ + +D K VKAQIWDT
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIVKAQIWDT 70
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D N VIML+GNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKAD 130
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
L LRA+ TE+ ++FA+REN FFMETSALEA NVE AF VLT+IYR++SKK+L A D+
Sbjct: 131 LNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDP 190
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L KG I V +D SA K+ GCC
Sbjct: 191 TTA----LPKGQMINVGSRDDVSAVKKSGCC 217
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 130/215 (60%), Positives = 168/215 (78%), Gaps = 7/215 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S+K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKAL--- 179
Query: 189 DEHDVAGNSNLLKGTR--IIVPGQDQNSASKRGCC 221
D+ + A N + G R + + A + CC
Sbjct: 180 DQGESAQNP--IGGERRTLEITNSADTEAKQGKCC 212
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 163/212 (76%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL EL+ H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVP EDA+ FA+RE +F ETSALEA NVE AF VLT+IYR++SKK+L D+
Sbjct: 130 RHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDDP- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ +G I V +D SA K+ GCC S
Sbjct: 189 ----AAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 160/201 (79%), Gaps = 10/201 (4%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++IDYVFKVV+IGDSAVGK+Q+L+RF ++EF DSK+TIGVEFQT+T++I K +KAQIW
Sbjct: 14 ERIDYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIW 73
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAML+YD+TKR +FDH+ RW+DELR HAD +IVIMLIGNK
Sbjct: 74 DTAGQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNK 133
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAVP EDA EFA+ + LFF ETSA NV++AF +L EIY + KK+L +
Sbjct: 134 VDLVDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKALECGN 193
Query: 190 EHDVAGNSNL-----LKGTRI 205
GNSN+ LKG++I
Sbjct: 194 -----GNSNVADAITLKGSKI 209
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+F+VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 VDRPGHDESPGNNVVDIS--VPPTTDGLKGNKFQCC 215
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 163/212 (76%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL EL+ H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE FFMETSALEA NVE AF VLT+IYR++SKK+L D D
Sbjct: 130 RHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
A +G I V +D SA K+ GCC S
Sbjct: 188 PAAPP---RGQTINVGSKDDVSAVKKAGCCSS 216
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 168/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ H+ + +N++ + + P D K CC S
Sbjct: 182 SDRSGHEESPGNNVVDIS--LPPTTDSQRGGKLPCCQS 217
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++D + + + +K I + D + KR CC
Sbjct: 182 RNDADNDPSPSGDNVKA--ISIAPTDSSDTRKRQCC 215
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++D + + + +K I + D + KR CC
Sbjct: 182 RNDADNDPSPSGDNVKA--ISIAPTDSSDTRKRQCC 215
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 165/211 (78%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++S+D KT+KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+AQ FA NL F+ETSA++A+NVETAF +LT+IYRI+S K+L ++ D
Sbjct: 128 RHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESS--AD 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
G ++ T + P D S + G CC
Sbjct: 186 AVGPTS--GSTITVTPTSDDASKASGGGKCC 214
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/227 (58%), Positives = 170/227 (74%), Gaps = 19/227 (8%)
Query: 9 NQKIDYVFK--------------VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQT 54
N + D++FK +VLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFAT 62
Query: 55 KTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELR 114
+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR
Sbjct: 63 RSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELR 122
Query: 115 GHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
HAD NIVIML+GNK DL LRAVPT++A++FA NL F+ETSAL+A+NVE AF +LT
Sbjct: 123 DHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 182
Query: 175 EIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
EIYRI+S K+L D +G + L G R I + ++ SK+GCC
Sbjct: 183 EIYRIVSSKALDNGD----SGQAPLSSG-RTIEVSKAPDTESKQGCC 224
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 170/216 (78%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD IVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+ +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KMQCC 213
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 172/216 (79%), Gaps = 5/216 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TK+L+ID+K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +++++ RWL ELR H D NIV+MLIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL L AV T++A+ A+RE L+FMETSALEATNVE AF LT+IYRI+SKK++ A
Sbjct: 127 KSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
DE A +S KG I + +D+ S+ K+ GCC S
Sbjct: 187 DEG--ATSSAPPKGETINI--KDEGSSWKKFGCCSS 218
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 165/213 (77%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNE ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +DAQ A++E L F+ETSALEA NVE AF T+L +IY IISKK+L A
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A + NL GT I V G + +KR CC
Sbjct: 186 E----AASINLPHGTTINV-GDLSGNMNKRTCC 213
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRSAHDESPGNNVVDIS--VPPTTDGQKGNKLQCC 215
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 173/224 (77%), Gaps = 9/224 (4%)
Query: 1 MSNLYGDYNQK--IDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLS 58
MS G Y + DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L
Sbjct: 1 MSAAAGGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQ 60
Query: 59 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD 118
+D K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ RWL ELR H D
Sbjct: 61 VDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTD 120
Query: 119 KNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
+IV MLIGNK DL L AV TED +EFA+ E+++FMETSAL+ATNV+ AF VLT+IY+
Sbjct: 121 PSIVCMLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQ 180
Query: 179 IISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
I++KK + A ++ G++ KG +I V +D SA KR GCC
Sbjct: 181 IVNKKPVEAPED----GSAGPGKGEKINV--KDDVSAMKRVGCC 218
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE +F +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
H+ + +N++ + + P D + K CC
Sbjct: 182 ADRAAHEDSPGNNVVDIS--VTPTMDGQRSVKLQCC 215
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+ L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ HD + +N++ + + P + +K CC S
Sbjct: 182 SDRSAHDESPGNNVVDIS--LPPTTEGQRGNKLPCCQS 217
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/212 (60%), Positives = 169/212 (79%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + +A++E+L+FMETSALEATNVE AF VLT+IYRI+SKK++ +
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAEN-- 188
Query: 193 VAGNSNL-LKGTRIIVPGQDQNSASKRGCCLS 223
GN+++ KG +I + D ++ + GCC S
Sbjct: 189 --GNASVPAKGEKIDLK-NDVSALKRVGCCSS 217
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 165/211 (78%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL EL+ H D NIV+ML+GNK L
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSVL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LRAV +D Q F+++E LFFMETSALE+TNVE AF +LT+IYR++SKK+L D
Sbjct: 130 RHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKALDVGEDPS 189
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
V G KG I V +D +A+K+ GCC
Sbjct: 190 AVPG-----KGQTISVGNKDDVTATKKVGCC 215
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 167/209 (79%), Gaps = 7/209 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L+++ K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TEDA+ FA+ E+L+FMETSALE+TNVE AF VLT+IY ++SKK++ A ++
Sbjct: 131 RHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+GN KG +I V D ++ K GCC
Sbjct: 189 -SGNVP-SKGEKIDV---DVSAVKKTGCC 212
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE +F +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
H+ + +N++ + + P D + K CC
Sbjct: 182 ADRAAHEDSPGNNVVDIS--VTPTMDGQRSIKLQCC 215
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 164/209 (78%), Gaps = 11/209 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +++KT+KAQIWDTA
Sbjct: 8 DFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+AQ+FA+ +L F+ETSALEA NV+ AF T+LT+IY I+S+K + A ++ D
Sbjct: 128 KHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQVAAPEKPD 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+I P + QNS K G C
Sbjct: 188 T-----------VIDPTKPQNSKEKSGGC 205
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 167/213 (78%), Gaps = 5/213 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIM +GNKCDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGNKCDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ ++++ L F+ETSAL++TNVETAF +LTEIY I+S+ S TAN D
Sbjct: 129 RHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSS-TAN---D 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSAS-KRGCCLSS 224
V L + T I DQ AS KR CC S+
Sbjct: 185 VPSAPELGERTTIKPTEGDQQQASGKRQCCRSN 217
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+T+ +D KT+KAQIWDTA
Sbjct: 10 DFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +FD++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+RAVP +DAQ+FA++E L FMETSALE+TNVE +F ++LTEIY+I+ +KSL A +
Sbjct: 130 SHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAEEAAS 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
+ +GT I + A KR CCL
Sbjct: 190 AGPS----QGTPINASDA-ETIAKKRSCCL 214
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 167/214 (78%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL +D KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV ED A++E L F+ETSALEATN+E AF T+LTEIY IISKK+L A
Sbjct: 126 KSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
+ A NS + +GT I V D + + +GCC
Sbjct: 186 ---EAAANSTVPGQGTTINVA--DASGNTSKGCC 214
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 165/209 (78%), Gaps = 2/209 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + H
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHG 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +N++ + + P D ++K CC
Sbjct: 189 ESPGNNVVDIS--VPPTTDGQKSNKLQCC 215
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/185 (68%), Positives = 157/185 (84%), Gaps = 2/185 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ GD + DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID
Sbjct: 1 MAGYKGD--DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNID 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D N
Sbjct: 59 AKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+MLIGNK DL L AVPTED + FA++E+L+FMETSALEATNVE AF VL++IYRI+
Sbjct: 119 IVVMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIV 178
Query: 181 SKKSL 185
SK+++
Sbjct: 179 SKRTV 183
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 11/212 (5%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+IDYVFK+V+IGD AVGKSQLL+ FARNEFS+DSK TIGVEF T+++ + K VKAQIWD
Sbjct: 9 RIDYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWD 68
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERY A+TSAYYRGA GA+LVYD+T+ +F+ + RWL ELR H D NIVIML+GNK
Sbjct: 69 TAGQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKA 128
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL LRAV TEDA+ FA++E++FFMETSA + TNV+T+F T+LT+IYRI+SKKSL A+
Sbjct: 129 DLRHLRAVSTEDAKAFAEKESIFFMETSA-QDTNVKTSFETLLTDIYRILSKKSLVADTY 187
Query: 191 HDVAGNSNLLKGTRIIV-PGQDQNSASKRGCC 221
D + LL GT+I V PG GCC
Sbjct: 188 VDSLTVARLLGGTKISVGPG---------GCC 210
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 173/218 (79%), Gaps = 8/218 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +F+++ RWL ELR HAD NIVIML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV T+DA+ +A++ NL F+ETSAL++TNVE AF T+LTEIYR++S++ + A
Sbjct: 124 KSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAG 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-----GCC 221
+ D + ++ +G ++IV +D+ A++R G C
Sbjct: 184 ESGD---SPSVGQGEKVIVSREDETKAAERKSKCSGSC 218
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L +D K +KAQIWDTA
Sbjct: 15 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTA 74
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ RWL ELR H D +IV MLIGNK DL
Sbjct: 75 GQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNKSDL 134
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED +EFA+ E+++FMETSAL+ATNV+ AF VLT+IY+I++KK + A ++
Sbjct: 135 RHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPED-- 192
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
G++ KG +I V +D SA KR GCC
Sbjct: 193 --GSAGPGKGEKINV--KDDVSAMKRVGCC 218
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T++ + FA+RE+L+FMETSALE+TNVE AF VLT+IYRI+SK+++ A ++
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRAVEAGEDS- 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
S KG +I + +D SA K+G C SS
Sbjct: 191 ---ASGPGKGEKINM--KDDVSAVKKGGCCSS 217
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 163/212 (76%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL EL+ H D NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV EDA+ FA+RE FFMETSALE+ NVE AF VLT+IYR++SKK+L D D
Sbjct: 130 RHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKALDIGD--D 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
A +G I V +D SA K+ GCC S
Sbjct: 188 PAAPP---RGQTINVGSKDDVSAVKKAGCCSS 216
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+F ++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPT+DA+ FA L F+ETSAL+A+NVE AF LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDQD 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
G +GT I + +K+G CC
Sbjct: 183 TSGPAPG-----QGTSIPLSASTPAGEAKKGQCC 211
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 162/204 (79%), Gaps = 4/204 (1%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
+VLIGDS VGKS LL+RF RNEF++D+K+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L + D +G +
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----SGQA 197
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
L ++ Q+ +K+GCC
Sbjct: 198 GLGDRRPVVDINPSQDPETKQGCC 221
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 167/208 (80%), Gaps = 4/208 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
+ FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++ E+D+
Sbjct: 260 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDM 319
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++N++ I VP +N K CC
Sbjct: 320 SPSNNVVP---IHVPPTTENKP-KVQCC 343
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 160/194 (82%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELRGHAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LR+VPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNL 199
E DV SN+
Sbjct: 182 RDPPEGDVIRPSNV 195
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 157/209 (75%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V TE AQ F +RE L F+ETSALE+TNVE AF +LTEIY I+SKK L + D
Sbjct: 130 KHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G + +I D K GCC
Sbjct: 190 KIGEG---RDVIVIDNAHDDGGKKKGGCC 215
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 163/209 (77%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +N FS+DSK+TIGVEF T+T ++ KT+KAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIWDTA 76
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIVIMLIGNK DL
Sbjct: 77 GQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNKTDL 136
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V T+ A FA+ E L F+ETSAL+ATNV+ AF TVL EI+R+ISKK+LT D
Sbjct: 137 RHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALTTED--- 193
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+G + +G I+V G + S S R CC
Sbjct: 194 -SGAGVVGEGQSILVSGGEPTSVSSR-CC 220
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 166/209 (79%), Gaps = 7/209 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L+++ K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TEDA+ FA+ E+L+FMETSALE+TNVE AF VLT+IY ++SKK++ A +
Sbjct: 131 RHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGQD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+GN KG +I V D ++ K GCC
Sbjct: 189 -SGNVP-SKGEKIDV---DVSAVKKTGCC 212
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 162/204 (79%), Gaps = 5/204 (2%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
+VLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+K+QIWDTAGQERY
Sbjct: 29 LVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 88
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 89 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 148
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A++FA NL F+ETSAL+A+NVE AF +LTEI+RI+S K+L + D
Sbjct: 149 VPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSA-----Q 203
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
N L +++ + Q+ SK+GCC
Sbjct: 204 NPLSDRKVVEITKTQDPESKQGCC 227
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/199 (65%), Positives = 159/199 (79%), Gaps = 4/199 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF +N FS+DSK+TIGVEF T+T+ ++ KT+KAQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +FD++ RWL ELR HAD NIVIMLIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNKMDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V EDA FA+RE L F+ETSAL+ATNV+ AF TVL EIYRIISKK+L+ +D
Sbjct: 136 KHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALSTDD--- 192
Query: 193 VAGNSNLLKGTRIIVPGQD 211
+G + +G I V D
Sbjct: 193 -SGAGAVKEGQSIQVSAGD 210
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T++ + FA+RE+L+FMETSALE+TNVE AF VL +IYRI+SK+++ A ++
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRAVEAGED-- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
S +G +I + +D SA K+G C SS
Sbjct: 190 --AASGPGRGEKINI--KDDVSAVKKGGCCSS 217
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 163/204 (79%), Gaps = 4/204 (1%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 31 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 90
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 91 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 150
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K++ E +G +
Sbjct: 151 VPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAII---EGGDSGQA 207
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
L G R I + ++ SK+GCC
Sbjct: 208 TLSSG-RTIEVSKTPDTESKQGCC 230
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 509 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 568
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D +IVIML+GNK DL
Sbjct: 569 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGNKGDL 628
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV +DA+ FA+REN FFMETSALE+ NVE AF VLT+IY+++S+K+L D+
Sbjct: 629 RHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIGDD-- 686
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D SA K+ GCC S
Sbjct: 687 ---PAALPKGQTINVGTKDDVSAVKKAGCCSS 715
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 173/224 (77%), Gaps = 7/224 (3%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+ GD + DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TK+L+ID
Sbjct: 1 MAGYRGD--DEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNID 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+T AYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D N
Sbjct: 59 GKVIKAQIWDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+ML+GNK DL L AV TE+A+ A+RE L+FMETSALEATNVE AF LT+IYRI+
Sbjct: 119 IVVMLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIV 178
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
SKK++ A DE A ++ KG I + +D+ SA K+ GCC S
Sbjct: 179 SKKAVEAGDEG--ATSTAPPKGQTINI--KDEGSAWKKFGCCSS 218
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK V+IGDS VGKS LL+RF +NEF ++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 17 DYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 76
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +FD++ARWL ELR H D +IV+ML+GNK DL
Sbjct: 77 GQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVMLVGNKSDL 136
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED QE+A+ E+L+FMETSAL+ATNV+ AF VLT+IY+I S+K++ A ++
Sbjct: 137 RHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRKTVDAGED-- 194
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
G++ KG +I V +D SA KR GCC
Sbjct: 195 --GSAAPSKGEKINV--KDDVSALKRVGCC 220
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 165/210 (78%), Gaps = 4/210 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KT+KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-H 191
LRAVPTEDA+ +A+R++L F+ETSAL++TNVETAF +LTEIY+I+S+K L +D
Sbjct: 128 RHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQLGDSDRGG 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D+ N + PG N K GCC
Sbjct: 188 DLPDNDVVDIHVPDSTPG---NQRKKSGCC 214
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 165/212 (77%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D +IVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGNKGDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV +DA+ FA+REN FFMETSALE+ NVE AF VLT+IY+++S+K+L D+
Sbjct: 131 RHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIGDD-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D SA K+ GCC S
Sbjct: 189 ---PAALPKGQTINVGTKDDVSAVKKAGCCSS 217
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D+KT+K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++++ FA+R L F+ETSAL++TNVE AF+ +LTEIY+I+S+K++
Sbjct: 122 VGNKSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + +S++ T I P +KR CC S
Sbjct: 182 RDGGNGEDSPSSDVKPIT--IPPTHGYTEPNKRKCCQS 217
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 164/213 (76%), Gaps = 6/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D K VKAQI
Sbjct: 7 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIM +GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDA+ FA+REN +FMETSALE+ NVE AF VLT+IY ++S+K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKALDIG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D+ + L KG I V D ++ K GCC
Sbjct: 187 DDP-----AALPKGETINVK-DDVSAVKKVGCC 213
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 163/213 (76%), Gaps = 2/213 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ ID+KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K SF+++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K D LRAVPTED + FA L F+ETSALEATNV+ AF +LT IY+I+S KSL A
Sbjct: 123 KTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL-AE 181
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ DV + +G I + + + SK CC
Sbjct: 182 EGADVGKKFDPREGNNITLSQEGRKEESKT-CC 213
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 166/218 (76%), Gaps = 3/218 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D K +K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEI+RI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
HD + +N++ I VP +K CC S
Sbjct: 182 ADRSAHDESPGNNVVD---ISVPPTTDGQKNKLPCCQS 216
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 165/214 (77%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D+KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A++FA L F+ETSAL+A+NVE AF LTEIYRI+S K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALDQG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
++ + + + PG A+K+G CC
Sbjct: 183 EQTAGPSQGSAIPLSSSTPPGD----ATKKGQCC 212
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 164/214 (76%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSA +A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + GT I + + A + G CC
Sbjct: 183 DAQAIPQG-----GTTIPLSKTADDGAGQGGKCC 211
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 165/215 (76%), Gaps = 3/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+Q+ DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+T ++ KT+KAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V ED Q A++E L F+ETSALEATNVE AF T+L EIY IISKK+L A
Sbjct: 126 KSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ A ++ + G + D + +KR CC S
Sbjct: 186 ---EAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 160/213 (75%), Gaps = 10/213 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK VLIGDS VGKS LL RF RNEF+++SK+TIGVEF T+ + +D+K +KAQIWDTA
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+TK+ SFD++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGNKTDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-- 190
LRAV TE+AQ FA NL F+ETSA++A+NVE AF TVLTEI+RI+S +++ DE
Sbjct: 128 LHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGGDEGA 187
Query: 191 HDVAGNSNLLKGTRIIVP--GQDQNSASKRGCC 221
H AG T I P G S S CC
Sbjct: 188 HPSAGQ------TLNIAPTIGDSGKSKSSGQCC 214
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 168/212 (79%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + +A++E+L+FMETSALEATNVE AF VLT+IY I+SKK++ +
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGAEN-- 188
Query: 193 VAGNSNL-LKGTRIIVPGQDQNSASKRGCCLS 223
GN+++ KG +I + D ++ + GCC S
Sbjct: 189 --GNASVPAKGEKIDLK-NDVSALKRVGCCSS 217
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 164/211 (77%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS GKS LL+RF RNEFS+DS++TIGVEF T+++++D KT+KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ +++RWL ELR HAD NIV+ML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ FA NL F+ETSAL+A+NVE AF +LTEIY I+S K+L ++D D
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSD--D 185
Query: 193 VAGNSNLLKGTRIIV-PGQDQNSASKR-GCC 221
V S G I V P D +K+ GCC
Sbjct: 186 VIKPSG---GETISVQPSTDDGGQTKKGGCC 213
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LR V TED Q ++++E L+FMETSALE+ NVE +F +LT+IYR++SKK+L D
Sbjct: 130 RHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGEDPS 189
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V G KG I V D + K GCC
Sbjct: 190 AVPG-----KGQTINVSKDDVTATKKVGCC 214
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KT+KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD+TK S+ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ F+ L F+ETSAL+ATNVE+AF T LT+IYRI+S+++L N +
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTLEQNADPI 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
+ TR I P D ++++ G CC
Sbjct: 188 KPPTGD----TRTINPSVDNSASAPSGKCC 213
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 160/209 (76%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+T+++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ FA L F+ETSAL+A+NVE+AF T+LT+IYRI+S K+L + +
Sbjct: 128 KHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTLEQSSDPI 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A S+ I V AS CC
Sbjct: 188 KAPTSDT-----IPVAIDSAAPASGSKCC 211
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 25 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 84
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 85 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 144
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 145 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 204
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D N+ I V + ++ CC
Sbjct: 205 RDPPEGDTIRPQNV---EPIDVKPTMNSEGMRKPCC 237
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 159/194 (81%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNL 199
E DV SN+
Sbjct: 182 RDPPEGDVIRPSNV 195
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 163/213 (76%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD TK+Q+F + RWL ELR HADKNIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K D +R V T DA EFA L F+ETSAL+ATNVE AF +LTEIYRI+S K+L
Sbjct: 123 KIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + + N L ++I + Q++ +K+ CC
Sbjct: 180 --ENGSSSQNPLGDRKVIEISKTQDADAKQKCC 210
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 154/187 (82%), Gaps = 2/187 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK VLIGDS VGKS LL RF RNEF+++SK+TIGVEF T+ + +D+K +KAQIWDTA
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+TK+ SFD++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-- 190
LRAV TE+AQ FA NL F+ETSA++A+NVE AF TVLTEI+RI+S +SL A D+
Sbjct: 128 LHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGV 187
Query: 191 HDVAGNS 197
H AG +
Sbjct: 188 HPTAGQT 194
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 167/211 (79%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KTVKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++H+ RWL ELR HAD +IVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLVGNKNDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA++ NL F+ETSAL++TNVE+AF +LT+IY I+S+K + + + D
Sbjct: 129 RHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQMANDGDAD 188
Query: 193 VAGNSNLLKGTRIIVPGQD--QNSASKRGCC 221
+A L +I +P + ++ + + CC
Sbjct: 189 IAA---LKNENKITIPPNESRKDPPASKKCC 216
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 161/213 (75%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D+KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPT+DA+ FA +L F+ETSAL+ATNVE AF +LTEIY I+S KS
Sbjct: 123 KSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAEE 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D + +G I Q+ +GCC
Sbjct: 183 DGKKF----DPREGGTNITLSQEGPKGESKGCC 211
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 167/216 (77%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D +N+ I V + ++ CC
Sbjct: 182 RDPPEGDTIRPTNV---EAIDVKPTVNTDSVRKQCC 214
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 166/212 (78%), Gaps = 11/212 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDSAVGKS LL+R+ARNEF+++SKATIGVEFQT+++ ID K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD++++ +FD++ RWLDELR H+D ++V+ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN---D 189
++R V E+A AQ E + F+ETSA++ATNV AF +V+ EIYR++SKK LT++
Sbjct: 130 DNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPLTSSVSMK 189
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ V G+S L G I P KR CC
Sbjct: 190 SNTVLGSSQRLAGIDDIQP--------KRNCC 213
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LR V TED Q ++++E L+FMETSALE+ NVE +F +LT+IYR++SKK+L D
Sbjct: 130 RHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGEDPS 189
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V G KG I V D + K GCC
Sbjct: 190 AVPG-----KGQTINVSKDDVTATKKVGCC 214
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + +VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 44 GTRGHPLQSLIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 103
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 104 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 163
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 164 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 223
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 224 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 255
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 164/211 (77%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL EL+ H D NIV+ML+GNK L
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSVL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LRAV +D Q F+++E LFFMETSALE+TNVE AF + T+IYR++SKK+L D
Sbjct: 130 RHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKALDVGEDPS 189
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
V G KG I V +D +A+K+ GCC
Sbjct: 190 AVPG-----KGQTISVGNKDDVTATKKVGCC 215
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 167/210 (79%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+ F +NEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ WL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TEDA+ FA++E+L+FMETSA EATNVE AF VLT+I+ I+SKK++ A E
Sbjct: 131 RHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSKKAMEAASE-- 188
Query: 193 VAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
++N+ KG +I + G+D ++ K GCC
Sbjct: 189 ---SANVPSKGDKIDI-GKDVSAVKKGGCC 214
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 168/212 (79%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + +A++E+L+FMETSALEATNVE AF VLT+IYRI+SKK++ +
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAEN-- 188
Query: 193 VAGNSNL-LKGTRIIVPGQDQNSASKRGCCLS 223
G +++ KG +I + D ++ + GCC S
Sbjct: 189 --GTASVPAKGEKIDLK-NDVSALKRVGCCSS 217
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D N+ I V + ++ CC
Sbjct: 182 RDPPEGDTIRPQNV---EPIDVKPTMNSEGMRKQCC 214
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 150/173 (86%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++S+D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
LRAVPT++A+ FA NL F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL
Sbjct: 128 KHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 166/209 (79%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ + KT+KAQIWDTA
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K++SF + +WL ELR HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TE+ +EFA++ +L F+ETSAL+ATNVE AF +LTEIYRI+ KK+LT +E +
Sbjct: 129 KHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALT--NEKN 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ L + + P +D+ + K+ CC
Sbjct: 187 PSFKPALGESVVVRDPAEDKGTHKKK-CC 214
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 165/206 (80%), Gaps = 4/206 (1%)
Query: 16 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQE 75
F VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSL 135
RYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL L
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 136 RAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAG 195
RAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++ E+D++
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSP 180
Query: 196 NSNLLKGTRIIVPGQDQNSASKRGCC 221
++N++ I VP +N K CC
Sbjct: 181 SNNVVP---IHVPPTTENKP-KVQCC 202
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/212 (60%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T++ + FA+RE+L+FMETSALE+TNVE AF VL +IYRI+ K+++ A ++
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRAVEAGED-- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
S +G +I + +D SA K+G C SS
Sbjct: 190 --AASGPGRGEKINI--KDDVSAVKKGGCCSS 217
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D N+ +I V ++ CC
Sbjct: 182 RDPPEGDTIRPQNV---EQIEVKPTMNAEGMRKQCC 214
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 168/215 (78%), Gaps = 3/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF TKTL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVI++IGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V +D Q A++E L F+ETSAL+ATN++ AF T+LTEIY IISKK+L A
Sbjct: 126 KSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + +GT I V +S ++RGCC S
Sbjct: 186 EAAASITHPG--QGTTINVSDTSGDS-NRRGCCSS 217
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/224 (56%), Positives = 173/224 (77%), Gaps = 8/224 (3%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N +Y DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++
Sbjct: 1 MTNREDEY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVE 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD N
Sbjct: 57 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSN 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL+++NVE AF T+LT IY I+
Sbjct: 117 IVIMLVGNKSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIV 176
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
S++ ++ + D + SN++ T + P QNS++K CC S+
Sbjct: 177 SQRQMSGRSDSDFSPASNVVPIT--VEP--TQNSSNKGACCQSN 216
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/212 (60%), Positives = 167/212 (78%), Gaps = 9/212 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LRAVPT++A+ F+ NL F+ETSAL+A+NVE+AF +LT+IYRI+S K+L ++ D
Sbjct: 128 KHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGDVI 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
AG +L + P D A K+G CC
Sbjct: 188 KPAGGETIL-----VAPTADDGGA-KQGSKCC 213
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 164/212 (77%), Gaps = 5/212 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q DY+FKVVLIGDSAVGKS LL+R+ARNEF+ +SKATIGVEFQT+++ ID K +KAQIW
Sbjct: 7 QSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKELKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQER+RAVTSAYYRGAVGA++VYD+T+R +F++++RW DEL+ H+D N+V+ML+GNK
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVMLVGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL +R V E+A A++ ++FMETSALEA NV AF TVL EI++I+SKK+LTA+
Sbjct: 127 SDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKALTADP 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
GN+ + G R+ G D + CC
Sbjct: 187 NK---GNTVVASGQRL--AGSDDTTPRTTACC 213
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D N+ +I V ++ CC
Sbjct: 182 RDPPEGDTIRPHNV---EQIEVKPTMNAEGMRKQCC 214
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 159/194 (81%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LR+VPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNL 199
E DV SN+
Sbjct: 182 RDPPEGDVIRPSNV 195
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 161/209 (77%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L V TED + FA++E+L+FMETSALEATNVE AF VLT+IYRI+SK+++ A D
Sbjct: 131 RHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDR-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A S + + I +D + ++ CC
Sbjct: 189 -ASTSVVPSQGQTINVNEDSSVLNRYRCC 216
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 165/207 (79%), Gaps = 4/207 (1%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
V VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQ
Sbjct: 171 VSPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 230
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 231 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 290
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++ E+D++
Sbjct: 291 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS 350
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRGCC 221
++N++ I VP +N K CC
Sbjct: 351 PSNNVVP---IHVPPTTENK-PKVQCC 373
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 167/216 (77%), Gaps = 7/216 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G ++ DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ I KTVK
Sbjct: 2 GTSDEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T++ +F+++ RWL ELR H D NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPTE+A FA+REN +FMETSALE+ NV+ AF+ VL+EIY ++S+K+L
Sbjct: 122 VGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTL 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
++ L +G I + D ++ K GCC
Sbjct: 182 EKGNDPGA-----LPQGQTINL--GDVSAVKKPGCC 210
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 164/211 (77%), Gaps = 8/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEFS D+K+TIGVEF T++++++ K +KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD++KR S++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL--TANDE 190
LRAVPT++A+ FA L F+ETSAL+A+NV++AF T LT+IYRI+S ++L +AN
Sbjct: 128 KHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTLESSANPI 187
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+GN T + P D N+ GCC
Sbjct: 188 EAPSGN------TVSVGPSLDSNAKQSNGCC 212
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 164/204 (80%), Gaps = 4/204 (1%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++ E+D++ ++
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 235
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
N++ I VP +N K CC
Sbjct: 236 NVVP---IHVPPTTENK-PKMQCC 255
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 172/221 (77%), Gaps = 9/221 (4%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N +Y DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++
Sbjct: 1 MTNREDEY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVE 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD N
Sbjct: 57 SKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSN 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL+++NVE AF T+LT IY I+
Sbjct: 117 IVIMLVGNKSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIV 176
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
S++ ++ + D + +SN++ T + P Q+ ASK+G C
Sbjct: 177 SQRQMSGRSDADFSPSSNVVPIT--VQPTQN---ASKQGAC 212
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 163/209 (77%), Gaps = 6/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ F+ L F+ETSAL+A+NVE+AF T+LT++YRI+S KSL + +
Sbjct: 128 KHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSLEQSSDPI 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A S+ I D ++ +K G C
Sbjct: 188 RAPTSD------TIPVAIDSSAPTKNGSC 210
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/224 (56%), Positives = 168/224 (75%), Gaps = 10/224 (4%)
Query: 6 GDYNQKIDYVFK--------VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTL 57
G + + DY+FK VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++
Sbjct: 2 GTRDDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 61
Query: 58 SIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHA 117
+D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HA
Sbjct: 62 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA 121
Query: 118 DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
D NIVIML+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIY
Sbjct: 122 DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIY 181
Query: 178 RIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
RI+S+K + HD + +N++ + + P D +K CC
Sbjct: 182 RIVSQKQIADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 223
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 159/207 (76%), Gaps = 5/207 (2%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
+ K L DS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQ
Sbjct: 5 IRKPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 64
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 65 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 124
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L + D
Sbjct: 125 LRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSQAPL 184
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRGCC 221
G+ +I Q +S SK+GCC
Sbjct: 185 GDRR-----PVIDVSQTPDSESKQGCC 206
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 164/211 (77%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LRAV TE+A+ FA + L F+ETSAL+A+NVE+AF +LT+IYRI+S KSL ++ D
Sbjct: 128 KHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVI 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
+G +L + P D A + G CC
Sbjct: 188 KPSGGETIL-----VTPTADDGGAKQGGKCC 213
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 160/209 (76%), Gaps = 6/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF VDSK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++D + RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ F+ L F+ETSAL+A+NV++AF T+LT IYRI+S KSL + +
Sbjct: 128 KHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSLEQSADPI 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A S+ I D ++ S+ CC
Sbjct: 188 RAPTSD------TIPVAIDSSAPSQSKCC 210
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 166/216 (76%), Gaps = 1/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIY I+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ D + SN ++ T + P D + + CC
Sbjct: 182 HDSPSSDGSHPSNNVQ-TIHVAPTTDDDRKKRVQCC 216
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 164/213 (76%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD TK Q+F + RWL ELR HADKNIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K D +RA+ T+ EFA+ L F+ETSAL+ATNVE AF +LTEIYRI+S K+L
Sbjct: 123 KIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E+ +G N L +++ + Q++ +K+ CC
Sbjct: 180 -ENGTSGQ-NPLGDRKVVEITKSQDADAKQKCC 210
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/199 (65%), Positives = 159/199 (79%), Gaps = 4/199 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +DAQ A++E L F+ETSALEA NVE AF T+L +IY IISKK+L A
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIV 207
+ A + NL GT I V
Sbjct: 186 E----AASINLPHGTTINV 200
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ ID KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K SF+++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K D LRAVPTED + FA L F+ETSALEATNV+ AF +LT IY+I+S KSL A
Sbjct: 123 KTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL-AE 181
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ DV + +G I + Q+ + CC
Sbjct: 182 EGADVGKKFDPREGNNISLS-QEGAKKEDKSCC 213
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 162/214 (75%), Gaps = 7/214 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTL---SIDHKTVKAQIW 69
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ ++D KT+KAQIW
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGKTIKAQIW 69
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIVIML+GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIVIMLVGNK 129
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LR V TE AQ F +RE L F+ETSAL++TNVE AF +LTEIY I+SKK L + D
Sbjct: 130 SDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVSKKVLDSED 189
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G L I++ Q + A K+G C S
Sbjct: 190 NRPKIGEGRDL----IVIDKQHDDGAKKKGGCCS 219
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 167/214 (78%), Gaps = 10/214 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL +D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T++ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + +A++E+L+FMETSALEATNVE AF VLT+IY I+SKK++ +
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAV------E 184
Query: 193 VAGN---SNLLKGTRIIVPGQDQNSASKRGCCLS 223
VA N S KG +I + D ++ + GCC S
Sbjct: 185 VAENGTTSVPAKGEKIDLK-NDVSALKRVGCCSS 217
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 166/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E V NL + P + ++ CC
Sbjct: 182 RDPPEGSVI-RPNLENID--VKPTNPTTDSVRKQCC 214
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D N+ I V + ++ CC
Sbjct: 182 RDPPEGDTIRPQNV---EPIDVKPTMNSEGMRKQCC 214
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 7/215 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+T+ +D T+KAQI
Sbjct: 5 NDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKAQI 64
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +S++ + +WL ELR HAD NIVIMLIGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLIGN 124
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT-- 186
KCDL LR V TEDA+ FA E L F ETSALE+TNVE AF +LTE+++I+SKKS +
Sbjct: 125 KCDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKSQSNE 184
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ND+ G+S + + D SK CC
Sbjct: 185 SNDQSQRHGSSTIE-----VNAINDGVKKSKSQCC 214
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 163/216 (75%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K S++++ RWL ELR HAD+NI+IML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LR++PTE+A+ FA+R L F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E DV R G D A +R CC
Sbjct: 182 RDPPEGDVIRPDAEPADVR--AAGAD---AVRRNCC 212
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 166/207 (80%), Gaps = 4/207 (1%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
+ K+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQ
Sbjct: 31 IIKMVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 90
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 91 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 150
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++ E+D++
Sbjct: 151 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS 210
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRGCC 221
++N++ I VP +N K CC
Sbjct: 211 PSNNVVP---IHVPPTTENKP-KMQCC 233
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 158/205 (77%), Gaps = 7/205 (3%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERYR
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYR 75
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRAV
Sbjct: 76 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 135
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSN 198
PTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L + G N
Sbjct: 136 PTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGE-----GGQN 190
Query: 199 LLKGTRII--VPGQDQNSASKRGCC 221
+L G R + + K GCC
Sbjct: 191 VLGGERKVLEISKSADEGQKKNGCC 215
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 165/209 (78%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
RAVPT++A+ FA++ L F+ET AL++TNVE AF T+LTEIYRI+ +K ++ E+D
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRREND 180
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++N++ I VP +N K CC
Sbjct: 181 MFPSNNVVP---IHVPPTTENKP-KVQCC 205
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D N+ I V + ++ CC
Sbjct: 182 RDPPEGDTIRPQNV---EPIDVKPTMSSEGMRKQCC 214
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 165/209 (78%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RN FS+DSK+TIGVEF T+T+ ++ K VKAQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIV+MLIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+V EDA FA+RE L F+ETSAL+ATNV+ AF TVLTEIYRIISKK+L A++
Sbjct: 136 KHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKALAADEAG- 194
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
AG + +G I V D +S + R CC
Sbjct: 195 -AGAGAVREGQSIQVSATDSSSFTSR-CC 221
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 164/214 (76%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
D + + + GT I + + A+K G CC
Sbjct: 183 D----SAQATIGAGTNISLSKPADDDAAKGGKCC 212
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 166/213 (77%), Gaps = 11/213 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL--TANDE 190
LRAVPTE+A+ F+ L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL +A+
Sbjct: 128 KHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADPI 187
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
G+ T + P D NSA+ +G CC
Sbjct: 188 KPPTGD------TLTVSPSVD-NSANAQGGKCC 213
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 164/211 (77%), Gaps = 9/211 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL ++
Sbjct: 128 KHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESS---- 183
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
SN+ I G Q++ ++G CC
Sbjct: 184 ---TSNIEPPKESISVGITQDTKQQQGKTCC 211
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 163/210 (77%), Gaps = 2/210 (0%)
Query: 12 IDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDT 71
I + K VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDT
Sbjct: 8 ISLICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD 127
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
L LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + H
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAH 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D + +N++ + + P D ++K CC
Sbjct: 188 DESPGNNVVDIS--VPPTTDGQKSNKLQCC 215
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 164/211 (77%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K Q+++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LRAV T++A++FA L F+ETSAL+A+NVE+AF +LT+IYRI+S KSL ++ D
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVI 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSA-SKRGCC 221
+G +L + P D A S CC
Sbjct: 188 KPSGGETIL-----VAPTADDGGAKSSSKCC 213
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 36 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 95
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 96 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 155
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 156 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 215
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E D N+ I V + ++ CC
Sbjct: 216 RDPPEGDTIRPQNV---EPIDVKPTMNSEGMRKQCC 248
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 163/213 (76%), Gaps = 8/213 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ + KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD N VIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TE+A FA++ NL F+ETSALEAT V+TAF +LTEIY+++S+K++ A +
Sbjct: 130 RHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRKTIQAEEN-- 187
Query: 193 VAGNSNLLKGTRIIVPGQD----QNSASKRGCC 221
++L G I + ++ Q K GCC
Sbjct: 188 --ATASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 155/200 (77%), Gaps = 11/200 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L V TED + FA++E+L+FMETSALEATNVE AF VLT+IYRI+SK+++ A D
Sbjct: 131 RHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPS 190
Query: 193 VAGNSNLLKGTRIIVPGQDQ 212
+ +VP Q Q
Sbjct: 191 TS-----------VVPSQGQ 199
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 162/209 (77%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF++++K+TIGVEF T+T+S+D KT+KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ F+ L F+ETSAL+A+NVE+AF T+LT+I+RI+S KSL + +
Sbjct: 128 KHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGDAI 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + L + P D ++A CC
Sbjct: 188 KPSSGDTL----TVSPSVDTSNAQASKCC 212
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 163/215 (75%), Gaps = 9/215 (4%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD TK Q+F + RWL ELR HADKNIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K D +RA+ T+ EFA+ L F+ETSAL+ATNVE AF +LTEIYRI+S K+L
Sbjct: 123 KIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE-- 180
Query: 189 DEHDVAGNS--NLLKGTRIIVPGQDQNSASKRGCC 221
GNS N L +++ + Q++ +K+ CC
Sbjct: 181 -----NGNSGQNPLGDRKVVEITKSQDADAKQKCC 210
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 165/218 (75%), Gaps = 8/218 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++S++ KTVK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ +A+R L F+ETSAL++TNVE AF +LTEIY+ +S K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
D G S GT I P D K+ CC+
Sbjct: 182 -GTDRQGYGGGS----GTIIPSPASD---PPKKQCCIP 211
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 171/221 (77%), Gaps = 7/221 (3%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN D + +++ VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D
Sbjct: 1 MSNNQNDEDTTPEFL---VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 57
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD N
Sbjct: 58 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN 117
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+
Sbjct: 118 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIV 177
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
S+K ++ E+D++ ++N++ I VP +N K CC
Sbjct: 178 SQKQMSDRRENDMSPSNNVVP---IHVPPTTENKP-KMQCC 214
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 165/218 (75%), Gaps = 8/218 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++S++ KTVK
Sbjct: 1 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 60
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 120
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ +A+R L F+ETSAL++TNVE AF +LTEIY+ +S K +
Sbjct: 121 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 180
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
D G S GT I P D K+ CC+
Sbjct: 181 -GTDRQGYGGGS----GTIIPSPASD---PPKKQCCIP 210
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 161/205 (78%), Gaps = 2/205 (0%)
Query: 17 KVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQER 76
KVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLR 136
YRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LR
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 137 AVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGN 196
AVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + HD +
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPG 180
Query: 197 SNLLKGTRIIVPGQDQNSASKRGCC 221
+N++ + + P D +K CC
Sbjct: 181 NNVVDIS--VPPTTDGQKPNKLQCC 203
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 168/214 (78%), Gaps = 4/214 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y+ +VF VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQ
Sbjct: 72 YSTLFCFVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 131
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+G
Sbjct: 132 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 191
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++
Sbjct: 192 NKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSD 251
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E+D++ ++N++ I V +N K CC
Sbjct: 252 RRENDMSPSNNVVP---IHVSPTTENKP-KVQCC 281
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 160/209 (76%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L V TED + FA++E+L+FMETSALEATNVE AF VLT+IYRI+SK+++ A D
Sbjct: 131 RHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDR-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A S + I +D + ++ CC
Sbjct: 189 -ASTSVAPSQGQTINVNEDSSVLNRYRCC 216
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 164/204 (80%), Gaps = 4/204 (1%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++ E+D++ ++
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 180
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
N++ I VP +N K CC
Sbjct: 181 NVVP---IHVPPTTENKP-KMQCC 200
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E V NL + P + ++ CC
Sbjct: 182 RDPPEGSVI-RPNLENID--VKPTNPTTDSVRKQCC 214
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 167/215 (77%), Gaps = 4/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY+FK+VLIGDS VGKS LL+RF RNEFS+++K+TIGVEF T+++ +D K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H + +V+ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TE+A EFA++E+++FMETSALE+ NV+ AF+ VLT+IY ++S+K+L
Sbjct: 124 KADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETV 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQN--SASKRGCC 221
D D L KG I++ +D + + K GCC
Sbjct: 184 D--DDPSTKALPKGETIVIGTKDDDVSAVKKSGCC 216
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 162/205 (79%), Gaps = 6/205 (2%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
+VLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 9 MVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERY 68
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 128
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A++FA NL F+ETSAL+A+NVE AF +LTEIYRI+S K+L + G+
Sbjct: 129 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGE-----GSG 183
Query: 198 NLLKGTRIIVP-GQDQNSASKRGCC 221
+L R ++ + ++ K+GCC
Sbjct: 184 PVLGNDRKVLEISKSADAEQKKGCC 208
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E V NL + P + ++ CC
Sbjct: 182 RDPPEGSVI-RPNLENID--VKPTNPATDSVRKQCC 214
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 165/211 (78%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA+LVYD++++Q+F + RWL+EL H+D N+V +L+GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND--E 190
+R VPT + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K +++ + +
Sbjct: 132 KGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQELNK 191
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D A SN G ++++P ++Q + K GCC
Sbjct: 192 QDPASLSN---GKKVVIPSEEQGESKKGGCC 219
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/215 (62%), Positives = 168/215 (78%), Gaps = 3/215 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS L +RF RNEF ++SK+TIGVEF T+TL ++ + VKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD+TK SF+++ RWL ELR HAD NIVIMLIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LR V TEDAQ +A++E L F+ETSALEATNV+ AF T+L +IYRIISKKSL+++
Sbjct: 127 TDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKSLSSSS 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
A N+ +G I + G Q + SK CC +S
Sbjct: 187 TDPSA--PNIKQGNTITIEGGLQPNTSK-SCCTTS 218
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 164/204 (80%), Gaps = 4/204 (1%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K ++ E+D++ ++
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 182
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
N++ I VP +N K CC
Sbjct: 183 NVVP---IHVPPTTENKP-KVQCC 202
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 159/196 (81%), Gaps = 3/196 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYR +TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 63 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 122
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + HD
Sbjct: 123 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHD 182
Query: 193 VAGNSNLLKGTRIIVP 208
+ +N++ I VP
Sbjct: 183 ESPGNNVVD---ISVP 195
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 164/211 (77%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K Q+++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
LRAV T++A++FA L F+ETSAL+A+NVE+AF +LT+IYRI+S KSL ++ D
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVI 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSA-SKRGCC 221
+G +L + P D A S CC
Sbjct: 188 KPSGGETIL-----VAPTADDGGAKSGSKCC 213
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 158/194 (81%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++S +TIGVEF T+++ +D KT+K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LR+VPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNL 199
E DV SN+
Sbjct: 182 RDPPEGDVIRPSNV 195
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 167/215 (77%), Gaps = 4/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY+FK+VLIGDS VGKS LL+RF RNEFS+++K+TIGVEF T+++ +D K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H + +V+ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TE+A E+A++EN++FMETSALE+ NV AF+ VLT+IY ++S+K+L
Sbjct: 124 KADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLETM 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQN--SASKRGCC 221
D D + L KG I++ +D + + K GCC
Sbjct: 184 D--DDPNSKALPKGETIVIGTKDDDVSAVKKSGCC 216
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ K +KAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 68
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD++K +FD+++RWL ELR HAD NI IML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLVGNK 128
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV T+DA +FA+ E L ++ETSALEATNVE AF +L +IYR ISKK + A+D
Sbjct: 129 TDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPV-ASD 187
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E + +G I V D NS K+ CC
Sbjct: 188 EGGAGAAGGVKEGKTINVAAGDANS-EKKQCC 218
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 164/213 (76%), Gaps = 8/213 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ + KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD N VIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TE+A FA++ NL F+ETSALEAT V++AF +LTEIY+++S+K++ A +
Sbjct: 130 RHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRKTIQAEEN-- 187
Query: 193 VAGNSNLLKGTRIIVPGQD----QNSASKRGCC 221
+++L G I + ++ Q K GCC
Sbjct: 188 --ASASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 166/216 (76%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G +++ DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ I K VK
Sbjct: 2 GAVDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD T+ +F+++ RWL ELR H D +VIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL L+AV TE+A FA++EN++FMETSALE+ NV+ AF+ VLT+IY ++SKK+L
Sbjct: 122 VGNKADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTL 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G++++ KG I + D + K GCC
Sbjct: 182 EKEN-----GSASVPKGETINIGKDDVSDVKKSGCC 212
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 160/205 (78%), Gaps = 5/205 (2%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 9 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 68
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRA 128
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L + D +
Sbjct: 129 VPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQA 184
Query: 198 NLLKGTRIIVPGQDQNSASKRG-CC 221
+ GT I + + ASK G CC
Sbjct: 185 TIGAGTNISLSKAADDEASKSGKCC 209
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 164/218 (75%), Gaps = 18/218 (8%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + +A+RE+L+F+ETSALEA NVE AF VLT+IY I+SKK+
Sbjct: 131 RHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKA-------- 182
Query: 193 VAGNSNLLKGTRIIVPGQ-------DQNSASKRGCCLS 223
V G N G+ VP Q D++ ++ CC S
Sbjct: 183 VEGGEN---GSASAVPAQGEKINIKDESGLNRIKCCSS 217
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 168/221 (76%), Gaps = 8/221 (3%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N +Y DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++
Sbjct: 1 MTNREDEY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVE 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD N
Sbjct: 57 GKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSN 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML+GNK DL LRAVP ++A+ A++ L F+ETSAL+++NVE AF T+LT IY I+
Sbjct: 117 IVIMLVGNKSDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIV 176
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
S++ +T + D + NSN++ T + P QN+A CC
Sbjct: 177 SQRQMTGRSDTDFSPNSNVVPIT--VQP--TQNAAKSSACC 213
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/230 (57%), Positives = 168/230 (73%), Gaps = 23/230 (10%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI--------- 59
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL +
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLSLSLN 65
Query: 60 -DH-------KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLD 111
D+ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL
Sbjct: 66 LDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLR 125
Query: 112 ELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLT 171
ELR HAD NIVIM+ GNK DL LR+V ED + A++E L F+ETSALEATN+E AF T
Sbjct: 126 ELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQT 185
Query: 172 VLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+L+EIY IISKK+L A + AGN L G + D ++ +++GCC
Sbjct: 186 ILSEIYHIISKKALAA---QEAAGN---LPGQGTAINISDSSATNRKGCC 229
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 154/181 (85%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 5 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 64
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+GNK DL
Sbjct: 65 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 124
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR+VPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K + E D
Sbjct: 125 RHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGD 184
Query: 193 V 193
V
Sbjct: 185 V 185
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 168/221 (76%), Gaps = 8/221 (3%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M+N +Y DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++
Sbjct: 1 MTNREDEY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVE 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD N
Sbjct: 57 GKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSN 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL+++NVE AF T+LT IY I+
Sbjct: 117 IVIMLVGNKSDLRHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIV 176
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
S++ ++ + D + SN++ I Q S+SK CC
Sbjct: 177 SQRQMSGRTDSDFSPASNVVP----ISVEPTQTSSSKGSCC 213
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 161/212 (75%), Gaps = 3/212 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+ +DY+FKVVLIGD+ VGKS LL+RF RNEFS++SK+TIGVEF T+++ + K +KAQIW
Sbjct: 7 RPVDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+TK+ SFD++ RWL EL+ HAD NIVIML+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL L+AV T+DA FA+ L F+ETSAL+ +NVE AF ++L+EIYR+ SKK+L
Sbjct: 127 SDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGS 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A N+ T +I P D+ K CC
Sbjct: 187 TSNFAPNAT---QTIVINPPADEGKTEKAKCC 215
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 161/211 (76%), Gaps = 8/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL--TANDE 190
LRAVPT++A+ FA L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL +A+
Sbjct: 128 KHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADPI 187
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G+S + P D N CC
Sbjct: 188 KPPTGDS------ITVSPSVDTNQQQGGKCC 212
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 166/216 (76%), Gaps = 1/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIM
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQ 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LTEIY I+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ D + SN ++ T + P D++ + CC
Sbjct: 182 HDSPTSDGSHPSNNVQ-TIHVAPTTDEDRRKRVQCC 216
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 165/211 (78%), Gaps = 9/211 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGK+ LL+RF RNEF+++SK+TIGVEF T+++ +D+KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K Q+++++ RWL ELR HAD NIV+ML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-- 190
LRAVPTE+A++FA L F+ETSAL+++NVE AF +LTEIYRI+S K+L ++++
Sbjct: 128 RHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDVI 187
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
AG + + P +D+ GCC
Sbjct: 188 RPTAGQT-----INVNQPTEDEKQGG--GCC 211
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 164/216 (75%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E + N+ I V + ++ CC
Sbjct: 182 RDPPEGETIRPQNV---EAIDVKPTVNTESVRKQCC 214
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 168/216 (77%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G +++ DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ ++K +K
Sbjct: 56 GAKDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIK 115
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +F++ RWL ELR HA+ NIV+ML
Sbjct: 116 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVML 175
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNKCDL LR V E+A+EFA++ +L F+ETSAL+++ V+TAF +LTEIY++++KK +
Sbjct: 176 VGNKCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQM 235
Query: 186 TANDEHDVAGNSNLLKGTRIIV-PGQDQNSASKRGC 220
+ N + + N+ +G RI + G D+ S C
Sbjct: 236 SGNGNNSL----NIGQGERIALNSGGDKASGDGSAC 267
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 162/212 (76%), Gaps = 1/212 (0%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ K +KAQIW
Sbjct: 8 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 67
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD++K +F++++RWL ELR HAD NI IML+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLVGNK 127
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV T+DAQ FA+ E L ++ETSALEATNVE AF +L +IYR ISKK + A+D
Sbjct: 128 TDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPV-ASD 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E + +G I V +A K+ CC
Sbjct: 187 ESGQGAAGGVKEGKTINVATGGDAAAEKKQCC 218
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 160/204 (78%), Gaps = 2/204 (0%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + HD + +
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 180
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
N++ + + P D +K CC
Sbjct: 181 NVVDIS--VPPTTDGQKPNKLQCC 202
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 166/218 (76%), Gaps = 8/218 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++S++ KTVK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ +A+R L F+ETSAL++TNVE AF +LTEIY+ +S K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+D G S GT I P + K+ CC S
Sbjct: 182 -GSDRQGYGGGS----GTIIPAPPTE---PPKKQCCNS 211
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 164/214 (76%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D+KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K+Q+++++ RWL ELR HAD NIVIML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV T+DA++FA L F+ETSAL+A+NVE AF L EIYRI+S K+L
Sbjct: 123 KSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALDQG 182
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
+ G +G+ I + + + K G CC
Sbjct: 183 EPSQGPG-----QGSAIPLGPSNMPADKKSGQCC 211
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSN 198
PT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + HD + +N
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN 180
Query: 199 LLKGTRIIVPGQDQNSASKRGCC 221
++ + + P D SK CC
Sbjct: 181 VVDIS--VPPTTDGQKPSKLQCC 201
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ D++FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIW
Sbjct: 5 EEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+ K S+++++RWL ELR HAD NIVIML+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAVP E+A +FA+ +L F+ETSAL++TNVE AF +LT IYR++S++S+ A +
Sbjct: 125 SDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKAGE 184
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++ G P + + +G C
Sbjct: 185 SDKTTPSDTIVVG-----PTDSSTTETSKGGC 211
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 165/218 (75%), Gaps = 8/218 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++S++ KTVK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ +A+R L F+ETSAL++TNVE AF +LTEIY+ +S K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
D G S GT I P + K+ CC S
Sbjct: 182 -GTDRQGYGGGS----GTIIPAPPTE---PPKKQCCNS 211
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 160/215 (74%), Gaps = 4/215 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RFAR+EFS+D+++TIGVEF TKT+ +D K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLVKAQIW 68
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F++ RWL ELR H D NIV+ML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVMLVGNK 128
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAVP E+A+ FA+R F METSALE+TNVE AF VL EIYR++SKK+L D
Sbjct: 129 ADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKALDIGD 188
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ + + +D+ S G C S+
Sbjct: 189 DPAAPPRGKTIN----VGAAKDEVSPVNTGGCCSA 219
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 159/209 (76%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGD+ VGKS LL+RF RNEFS++SK+TIGVEF T+++ + K +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+ SFD++ RWL EL+ HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L+AV T+DA FA+ L F+ETSAL+ +NVE AF ++L+EIYR+ SKK+L +
Sbjct: 129 QHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSN 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A N+ T +I P D+ K CC
Sbjct: 189 FAPNAT---QTIVINPPADEGKTEKAKCC 214
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 165/209 (78%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF++++K+TIGVEF T++++++ KT+KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD++K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ FA L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL +++
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSEDPI 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + ++ + + DQN + CC
Sbjct: 188 KPTSGDTIQVSHSV----DQNQSQGGKCC 212
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 165/219 (75%), Gaps = 3/219 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G +++ DY+FKVVLIGDS VGKS LLARF RNEF+++SK+TIGVEF T+++ ++ K +K
Sbjct: 2 GTGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K+ ++ ++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVP ++A FA+ NL F+ETSAL++TNVETAF +LTEIY I+S+K +
Sbjct: 122 VGNKSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
E D +N+ I V + ++ CC SS
Sbjct: 182 RDPPEGDTIRPTNI---EPIDVKPTVNSDNVRKQCCQSS 217
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 165/211 (78%), Gaps = 9/211 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGK+ LL+RF RNEF+++SK+TIGVEF T+++ +D+KTVK+QIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K Q+++++ RWL ELR HAD NIV+ML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-- 190
LRAVPTE+A++FA L F+ETSAL+++NVE AF +LTEIYRI+S K+L ++++
Sbjct: 128 RHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDVI 187
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
AG + + P +D+ GCC
Sbjct: 188 RPTAGQT-----INVNQPTEDEKQGG--GCC 211
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 160/209 (76%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FKVVLIGDS VGKS LL+RFARNEF+ DSK+TIGVEF T+++ D KT+K+QIWDTAG
Sbjct: 8 YLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWDTAG 67
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QERYRA+TSAYYRGAVGA+LVYD++++++F+ + RWL ELR HAD +IVIML+GNK DL
Sbjct: 68 QERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNKSDLK 127
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
SLRAVPTE+A+EFA R L FMETSAL+ NVETAF +L +Y+++S K++ N+ + V
Sbjct: 128 SLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAME-NESNRV 186
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKRG-CC 221
A G I V N+ G CC
Sbjct: 187 ATGPG--AGKSITVAPTTTNAKPASGKCC 213
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 169/223 (75%), Gaps = 4/223 (1%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + ++ DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYSEDDKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL R VPT + ++ A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRK 182
Query: 184 SLTANDEHDVAGNSNLLKGTRIIVPG---QDQNSASKRGCCLS 223
+ + E + G L G +++ G Q+ N+ +K+GCC S
Sbjct: 183 VILSQ-ELNKPGAPELGNGKTVVLQGDGNQEGNAETKKGCCSS 224
>gi|218201822|gb|EEC84249.1| hypothetical protein OsI_30694 [Oryza sativa Indica Group]
Length = 214
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 117/147 (79%), Positives = 135/147 (91%)
Query: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLR 136
YRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIMLIGNK DLG+LR
Sbjct: 68 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLR 127
Query: 137 AVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGN 196
VPTEDA+EFA+RENLFFMETSALE+TNVE AF+TVLTEIYRI+SKK+L AN+E D +GN
Sbjct: 128 VVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGN 187
Query: 197 SNLLKGTRIIVPGQDQNSASKRGCCLS 223
S+LLKGT+I+VPGQ+ +K CC+S
Sbjct: 188 SSLLKGTKIVVPGQEPAPPTKASCCMS 214
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 159/204 (77%), Gaps = 5/204 (2%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERYR
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRAV
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 124
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSN 198
PTE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L D + +
Sbjct: 125 PTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGD----SAQAT 180
Query: 199 LLKGTRIIVPGQDQNSASKRG-CC 221
+ GT I + + ASK G CC
Sbjct: 181 IGAGTNISLSKPADDDASKGGKCC 204
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 164/209 (78%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KTVKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVP ++A+ FA++ L F+ETSAL+++NVE AF T+LTEIYRI+S++ ++ +
Sbjct: 129 RHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMSGRGDDS 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +S ++ T + P QNS + CC
Sbjct: 189 FSPSSKVVPIT--VQP--TQNSGKQSACC 213
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 164/206 (79%), Gaps = 3/206 (1%)
Query: 16 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQE 75
F++VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSL 135
RYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL L
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 136 RAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAG 195
RAVPT++A+ FA++ NL F+ETSAL++TNVETAF +LTEIY+I+S+K + + + D +
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDDNSP 184
Query: 196 NSNLLKGTRIIVPGQDQNSASKRGCC 221
++N+ I V D + ++ CC
Sbjct: 185 SNNV---QTIHVAPTDNAAPRQQKCC 207
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 167/222 (75%), Gaps = 5/222 (2%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + ++ DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+F + RWL+EL H+D N+V
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL LR V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+++ + + D A SN G ++++P Q + K GCC S
Sbjct: 183 VMSSQELNKQDPASLSN---GKKVVIPSDGQGESKKGGCCSS 221
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/232 (55%), Positives = 169/232 (72%), Gaps = 25/232 (10%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+ + ++FKVVLIGDS GKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIW
Sbjct: 11 RPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 70
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD++K Q++D++ RWL ELR HAD NIVIML+GNK
Sbjct: 71 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNK 130
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT--------------- 174
DL LRAVPTE+A++FA NL F+ETSAL+A+NVE AF +LT
Sbjct: 131 SDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGISKRRSLTA 190
Query: 175 -----EIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
EIYRI+S K+L +G +++ + +II + Q++ +K GCC
Sbjct: 191 ILFFVEIYRIVSSKALEGE-----SGGASVGERRQIIDIEKTQDTENKGGCC 237
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 153/178 (85%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF++++K+TIGVEF T+++++D KT+KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD++K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
LRAVPTE+A+ FA L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL +D+
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSDD 185
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 164/216 (75%), Gaps = 11/216 (5%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGK+ LL+RF RNEF+++SK+TIGVEF T+++ +D K +KAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +++ + RWL ELR HAD NIVIML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAVPT++A++FA L F+ETSAL+ATNV+ +F +LTEIYRI+S K+L ++
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESS 183
Query: 189 DEHDVAGNSNLLK---GTRIIVPGQDQNSASKRGCC 221
+ N +K G I+V + GCC
Sbjct: 184 N--------NTIKPTSGQTILVSQTPDEQTKQGGCC 211
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 149/173 (86%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
LRAVPT++A+ FA L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL
Sbjct: 128 KHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL 180
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 166/220 (75%), Gaps = 5/220 (2%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + N+ DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYSEDNKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++ Q+F + RWL+EL H+D N+V
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL +R VPT + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+T+ + + D A SN G ++++P + ++ GCC
Sbjct: 183 VMTSQELNKQDPASLSN---GKKVVIPSEGESKTGGGGCC 219
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 160/212 (75%), Gaps = 1/212 (0%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ K +KAQIW
Sbjct: 17 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 76
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD++K +F++++RWL ELR HAD NI IML+GNK
Sbjct: 77 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGNK 136
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV T+D Q FA+ E L ++ETSALEATNVE AF +L +IYR ISKK++ +D
Sbjct: 137 TDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALDD 196
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +G I V D S K+ CC
Sbjct: 197 GGAGGAGGGVKEGKTINVAASD-TSGEKKQCC 227
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 161/216 (74%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K S++++ RWL ELR HAD+NI+IML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LR++PTE+A+ FA+ L F+ETSAL++TNVE AF +LTEIYRI+S++ +
Sbjct: 122 VGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E DV R Q + +R CC
Sbjct: 182 RDPPEGDVIRPDAEPADVR-----PSQADSVRRQCC 212
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 161/216 (74%), Gaps = 7/216 (3%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RFAR+EFS+++++TIGVEF TKT+ +D + VKAQIW
Sbjct: 14 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIW 73
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA++VYD+T+R +F++ RWL ELR H D NIV+ML+GNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGNK 133
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAVP EDA+ FA+ F METSALEATNVE AF VL +IYR++S+ +L D
Sbjct: 134 ADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIGD 193
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQ--NSASKRGCCLS 223
+ + +G I V +D + GCC S
Sbjct: 194 DP-----AAPPRGRTIDVSAKDDAVTPVNSSGCCSS 224
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 163/218 (74%), Gaps = 18/218 (8%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQ RYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 71 GQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + +A+RE+L+F+ETSALEA NVE AF VLT+IY I+SKK+
Sbjct: 131 RHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKA-------- 182
Query: 193 VAGNSNLLKGTRIIVPGQ-------DQNSASKRGCCLS 223
V G N G+ VP Q D++ ++ CC S
Sbjct: 183 VEGGEN---GSASAVPAQGEKINIKDESGLNRIKCCSS 217
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 159/210 (75%), Gaps = 11/210 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL GDS VGKS LL+RF RN+FS DS+ATIGVEF T+++ D K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQE SAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 124
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ TE+A+ FA+REN FFMETSALEA NV+ AF VLT+IYR++SKK+L A D+
Sbjct: 125 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L KG I V G+D SA K+ GCC
Sbjct: 185 TA----LPKGQMINVGGRDDISAVKKPGCC 210
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 165/209 (78%), Gaps = 2/209 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D+KTVKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL EL+ HAD+NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGNKNDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LT+IY I+S+K + + ++D
Sbjct: 129 RHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSEGDND 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + + + T I P ++ K C
Sbjct: 189 PSPSRDNIPIT--IAPTDPTDNRKKSCAC 215
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 166/222 (74%), Gaps = 5/222 (2%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + ++ DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+F + RWL+EL H+D N+V
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL LR V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+++ + + D A SN G ++++P Q K GCC S
Sbjct: 183 VMSSQELNKQDPASLSN---GKKVVIPSDGQGEFKKGGCCSS 221
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 163/211 (77%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA+LVYD++++Q+F + RWL+EL H+D N+V +L+GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND--E 190
+R VPT + + A+ + LFFMETSA +++NV AF TV+ EIY I+S+K +++ + +
Sbjct: 132 KDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKVMSSQELNK 191
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D A SN G ++++P + Q A K GCC
Sbjct: 192 QDPASLSN---GKKVVIPSEAQGEAKKGGCC 219
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/173 (68%), Positives = 149/173 (86%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
L AV TED + +A++E+L+FMETSALEATNVE AF VLT+IY I+SKK++
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAV 183
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q DY+FKVVLIGDSAVGKS LL+R+ARNEF+ +SKATIGVEFQT+++ ID K VKAQIW
Sbjct: 7 QSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQER+RAVTSAYYRGAVGA++V+D+T+R +F++++RWLDEL+ H+D ++V+ML+GNK
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVMLVGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL +R V E+A A+ + FMETSALE+ NV AF TVL EI++I+SKK+LTA+
Sbjct: 127 SDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKALTADP 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
N+ + G R+ G D + GCC
Sbjct: 187 NK---SNTVVASGQRL--AGGDDTTPRTGGCC 213
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 159/203 (78%), Gaps = 5/203 (2%)
Query: 20 LIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRA 79
+IGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVP 139
+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRAVP
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 140 TEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNL 199
TE+A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K+L + D + + +
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----SAQATI 176
Query: 200 LKGTRIIVPGQDQNSASKRG-CC 221
GT I + + A+K G CC
Sbjct: 177 GAGTNISLSKPADDDAAKGGKCC 199
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 150/178 (84%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+ DSK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K+ +F ++ARWL ELR HAD +IV+ML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
LRAV T++A++FA L F+ETSAL+A+NVE AF +LT+IYRI+S KSL A DE
Sbjct: 128 KHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDAADE 185
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 161/213 (75%), Gaps = 7/213 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K VKAQ+WDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQVWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+++ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENL-FFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
LRAV TED+ F E FFMETSALE+ NVE AF VLT+IYR++SKK+L D+
Sbjct: 131 RHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGDDP 190
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D S K+ GCC S
Sbjct: 191 -----TALPKGQTINVGSRDDVSPVKKSGCCSS 218
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/225 (57%), Positives = 165/225 (73%), Gaps = 15/225 (6%)
Query: 9 NQKIDYVFK------------VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKT 56
N + D++FK VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T++
Sbjct: 3 NDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRS 62
Query: 57 LSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGH 116
+ ID KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K SF++++RWL ELR H
Sbjct: 63 IQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRDH 122
Query: 117 ADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
AD NIVIML+GNK D LRAV TED + FA L F+ETSALEATNV+ AF +LT I
Sbjct: 123 ADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTSI 182
Query: 177 YRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
Y+I+S KSL +E DV+ + +G I + Q+++ ++GCC
Sbjct: 183 YQIVSSKSLA--EEGDVSKKFDPSQGNNISLS-QEKSQEEQKGCC 224
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 160/211 (75%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ F+ L F+ETSAL+A+NVE AF T+LT+IYRI+S K+L
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKAL-----EQ 182
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
A + +G I V A+K G CC
Sbjct: 183 AADSIKPTQGDSIPVRPTLDAPANKEGGKCC 213
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 163/218 (74%), Gaps = 5/218 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ D K +KAQI
Sbjct: 6 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++KR SF++ RWL ELR HAD+NIVIML+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TE+ Q++A L F+ETSAL+A++VE AF+ +LT+IYR++ K+ L +
Sbjct: 126 KSDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLASG 185
Query: 189 DEHDVAGNSNLL----KGTRIIVPG-QDQNSASKRGCC 221
D S + +G I V N +SKR CC
Sbjct: 186 DPTVAKSASGAVYQAGRGETISVGNLSHDNRSSKRKCC 223
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 159/209 (76%), Gaps = 2/209 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ K +KAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTA 76
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NI IML+GNK DL
Sbjct: 77 GQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTDL 136
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T+DA +A+ E L ++ETSALEA NVE AF +L +IYR ISKK++ + E D
Sbjct: 137 KHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVAS--EED 194
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A + + +G I V + K+ CC
Sbjct: 195 RAAAAGVKEGKTINVAATASDGGEKKQCC 223
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 162/211 (76%), Gaps = 10/211 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV T++A+ FA +L F+ETSAL+A+NVE AF +LTEIYRI+S K L N EH
Sbjct: 127 RHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPEN-EH- 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
G S +G +P DQ + G CC
Sbjct: 185 --GGSIPDRG----IPLSDQPKNDQGGGKCC 209
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 159/212 (75%), Gaps = 11/212 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL---TAND 189
LRAV T++A+ F+ L F+ETSAL+A+NVE+AF T+LT+IYRI+S KSL T N
Sbjct: 128 KHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSTNNI 187
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E G S + P D + CC
Sbjct: 188 EPPKEGIS--------VGPSLDSTATQGSKCC 211
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D+KTVKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAV A+LVYD+ K +++++ RWL EL+ HAD+NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGNKNDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +LT+IY I+S+K + + ++D
Sbjct: 129 RHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSEGDND 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + + + T I P +S K C
Sbjct: 189 PSPSRDNIPIT--IAPTDPTDSRKKSCAC 215
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 163/212 (76%), Gaps = 11/212 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDSAVGKS LL+R+ARNEF+++SKATIGVEFQT+++ I K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +F+++ RWLDELR H+D ++V+ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL---TAND 189
++R V E+A AQ E + F+ETSA++ATNV AF +V+ EIYR++SKK L T+
Sbjct: 130 DNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPLASSTSMK 189
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ V G+S L G P K+ CC
Sbjct: 190 SNTVLGSSQRLAGIDDTQP--------KKNCC 213
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 165/218 (75%), Gaps = 5/218 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KTVK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ +A++ L F+ETSAL++TNVE AF +LTEIY+ +S K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHV 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ ++ G+ IV +K+ CC S
Sbjct: 182 GGDNRAAIS-----TPGSNGIVISPTAEPQTKKQCCSS 214
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 161/206 (78%), Gaps = 9/206 (4%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+KIDYVFKVV+IGDSAVGK+QLL+RF +NEF DSK+TIGVEFQT+T+++ K VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIW 82
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAM+VYD+TKR SFDH+ARW++ELR HAD + VIML+GNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 130 CDLG-SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR--IISKKSLT 186
DL RAVPTEDA EFA+ + LFF E SAL NV+ AF +L EI+ ++S+K++
Sbjct: 143 ADLAVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAME 202
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQD 211
++ G L G+RI ++ G D
Sbjct: 203 SD-----GGAPVKLDGSRIDVISGSD 223
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 160/209 (76%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KTVKAQIWDTA
Sbjct: 34 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 93
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++ + RWL ELR HAD+NIVIML+GNK DL
Sbjct: 94 GQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSDL 153
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ +A++ L F+ETSAL++TNVE AF +LTEIY+ +S K +D
Sbjct: 154 RHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFGGDDRVQ 213
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V+ GT IV + +K+ CC
Sbjct: 214 VSP-----VGTNGIVISPTTDPQTKKQCC 237
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
GD Q DY+FK+VLIGDS+VGKS LLARFARNEF +SK+TIGVEFQT+ L ID K +K
Sbjct: 5 GDDGQSQDYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTIL 124
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL R V T + Q A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 125 VGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVF 184
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQ-DQNSASKRGCCLS 223
+ ++ S L G +++ G+ +Q S+ R CC S
Sbjct: 185 QSLEQKKSELQS-LSSGKAVVLQGEANQTSSGGRWCCSS 222
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 162/212 (76%), Gaps = 8/212 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF TK++ + KT+KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK SF+++ RWL ELR HAD N VIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A FA++ NL F+ETSALEA V++AF +LTEIY+++S+K++ A +E+
Sbjct: 130 RHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQA-EENQ 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR---GCC 221
++ + G I++ K+ CC
Sbjct: 189 IS----IPSGDNIVITSDKTEEGVKKKKSSCC 216
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 168/213 (78%), Gaps = 7/213 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ + KT+KAQI
Sbjct: 6 DEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +F+++ RWL ELR HA+ NIV+ML+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV T++A F+++ NL F+ETSAL+A+ V+TAF +LTEIYR++S++++ A
Sbjct: 126 KSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMQAE 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ N+ + G +I + Q+ K+GCC
Sbjct: 186 EN----ANAPMSAGHKISLS---QSGDKKKGCC 211
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 163/216 (75%), Gaps = 7/216 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KTVK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ +A+R L F+ETSAL++TNVE AF +LTEIYR +S + +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTRQV 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + +N I ++ +K+ CC
Sbjct: 182 PPDRIVPIHSQNN-------ITLSSTNDAQNKKQCC 210
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 158/210 (75%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++++D KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ F+ L F+ETSAL+ NVE AF +LT+IYRI+S K+L A D
Sbjct: 128 KHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEA--APD 185
Query: 193 VAGNSNLLKGTRI-IVPGQDQNSASKRGCC 221
V S G I I P + N+ K G
Sbjct: 186 VIKPSG---GESITIAPSSNTNANEKSGLI 212
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 161/206 (78%), Gaps = 9/206 (4%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+KIDYVFKVV+IGDSAVGK+QLL+RF NEF DSK+TIGVEFQT+T+++ K VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIW 82
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAM+VYD+TKR SFDH+ARW++ELR HAD + VIML+GNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 130 CDLG-SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR--IISKKSLT 186
DL RAVPTEDA EFA+ + LFF E SAL NV+ AF +L EI+ ++S+K++
Sbjct: 143 ADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAME 202
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQD 211
++ G + L G+RI ++ G D
Sbjct: 203 SD-----GGATVKLDGSRIDVISGSD 223
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 160/209 (76%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+GNK DL
Sbjct: 69 GQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TE+A+ FA+R L F+ETSAL++TNV+ AF +LTEIYRI+S+K + E D
Sbjct: 129 RHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDPPEGD 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V N+ I V ++ CC
Sbjct: 189 VIRPHNV---EPIDVKPTMNTDGVRKQCC 214
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 162/212 (76%), Gaps = 8/212 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF TK++ + KT+KAQIWDTA
Sbjct: 174 DYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 233
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK SF+++ RWL ELR HAD N VIML+GNK DL
Sbjct: 234 GQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNKSDL 293
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A FA++ NL F+ETSALEA V++AF +LTEIY+++S+K++ A +E+
Sbjct: 294 RHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQA-EENQ 352
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR---GCC 221
++ + G I++ K+ CC
Sbjct: 353 IS----IPSGDNIVITSDKTEEGVKKKKSSCC 380
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 157/204 (76%), Gaps = 2/204 (0%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FA++ L F+ETSAL++T VE AF +LTEIYRI+S+K + HD + +
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIADRSAHDESPGN 180
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
N++ + + P D K CC
Sbjct: 181 NVVDIS--LPPTTDSQRGDKLPCC 202
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 164/218 (75%), Gaps = 7/218 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KT+K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ F+++ L F+ETSAL++TNVE AF +LTEIY I+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQI 181
Query: 186 --TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ NDE G + I++ + + CC
Sbjct: 182 NDSNNDEEVKDG-----QPVDIVISSTNPQPNKQSQCC 214
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 164/218 (75%), Gaps = 8/218 (3%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++S++ KTVK
Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ +A+R L F+ETSAL++TNVE AF +LTEIY+ +S K +
Sbjct: 122 VGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ + G ++ P K+ CC S
Sbjct: 182 GSDRQGYGGGGGTIIPAPPTEPP--------KKQCCNS 211
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 166/217 (76%), Gaps = 4/217 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVI+L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILL 121
Query: 126 IGNKCDLGSLRAV-PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
+GNK DL LRAV P +A+ FA+R +L F+ETSAL++TNVE AF +LTEIYRI+S+K
Sbjct: 122 VGNKSDLRHLRAVCPLTEARAFAER-HLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ 180
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ HD + +N++ + + P D +K CC
Sbjct: 181 IADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGD+ VGKS LL+RF RNEFS++SK+TIG EF T+++ + K +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+ SFD++ RWL EL+ HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L+AV T+DA FA+ L F+ETSAL+ + VE AF ++L+EIYR+ SKK+L +
Sbjct: 129 QHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKALEKGSTSN 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A N+ T +I P D+ K CC
Sbjct: 189 FAPNAT---QTIVINPPADEGKTEKAKCC 214
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 160/213 (75%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+L YD+TKRQ+FD++ RWL ELR H D NIVI+L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D Q ++E L F+ETSALEA NV+ AF T+LT+IY IISKK+L A
Sbjct: 126 KSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A S L G + D ++ KRGCC
Sbjct: 186 ----EAAASTALPGQGTTINVSDNSANVKRGCC 214
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 164/212 (77%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ KTVKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVP ++A+ FA++ L F+ETSAL+++NVE AF T+LT IY I+S++ ++ + D
Sbjct: 128 RHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMSGRSDSD 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ SN++ T + P Q + S +G C S
Sbjct: 188 FSPASNVVPIT--VEPTQ---TLSNKGVCCQS 214
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 164/213 (76%), Gaps = 6/213 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ + KT+KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K +F+++ RWL ELR HA+ NIV+MLIGNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V E+A EFA++ NL F+ETSAL+A+ V++AF +LTEIYR++S+K++ AN
Sbjct: 129 RHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAAN---- 184
Query: 193 VAGNSNLLKGTRIIVPG--QDQNSASKRGCCLS 223
A +L +G I + D ++ SK C S
Sbjct: 185 TATGPDLSRGETIALSSARDDASNRSKSSCAGS 217
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 158/207 (76%), Gaps = 5/207 (2%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
V ++VLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQ
Sbjct: 19 VLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 78
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERYRA+TSAYYRGAVGA+LVYD TK+Q+F + RWL ELR HADKNIVIML+GNK D
Sbjct: 79 ERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGNKIDEKH 138
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
+R V T DA EFA L F+ETSAL+ATNVE AF +LTEIYRI+S K+L + +
Sbjct: 139 MRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL-----ENGS 193
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ N L ++I + Q++ +K+ CC
Sbjct: 194 SSQNPLGDRKVIEISKTQDADAKQKCC 220
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 161/209 (77%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+GNK DL
Sbjct: 69 GQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TE+A+ FA+R L F+ETSAL++TNV+ AF +LTEIYRI+S+K + E D
Sbjct: 129 RHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDPPEGD 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
N+ I V + + ++ CC
Sbjct: 189 TIRPQNV---EPIDVKPTMSSDSVRKQCC 214
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 158/201 (78%), Gaps = 7/201 (3%)
Query: 17 KVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQER 76
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQER
Sbjct: 13 PVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLR 136
YRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LR
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132
Query: 137 AVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGN 196
AVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K + HD +
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPG 192
Query: 197 SNLLKGTRIIVP----GQDQN 213
+N++ I VP GQ N
Sbjct: 193 NNVVD---ISVPPTTDGQKPN 210
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ K +KAQIW
Sbjct: 8 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 67
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD++K +F++++RWL ELR HAD N IML+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLVGNK 127
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV T+DA+ FA+ E L ++ETSALEATNVE AF +L +IYR +SKK + A+D
Sbjct: 128 TDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKPV-ASD 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E AG + +G I V +A K+ CC
Sbjct: 187 EVG-AGQGGVKEGKTIDVATGADAAAHKKQCC 217
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
GD Q DY+FK+VL+GDS+VGKS LLARFARNEF +SK+TIGVEFQT+ L ID K +K
Sbjct: 5 GDDGQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL R V T + Q A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 125 VGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVF 184
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQ-DQNSASKRGCCLS 223
+ ++ S L G +++ G+ +Q S+ R CC S
Sbjct: 185 QSLEQKKSELQS-LSNGKAVVLQGETNQTSSGGRWCCSS 222
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 166/213 (77%), Gaps = 6/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ + KT+KAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +F+++ RWL ELR HA+ NIV+ML+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV T++A F+++ NL F+ETSAL+A+ V+TAF +LTEIYR++S++++ A
Sbjct: 126 KSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D A L G I + +++ +R CC
Sbjct: 185 --EDGANAPQLSSGQTISLNAENK---PRRNCC 212
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 165/216 (76%), Gaps = 5/216 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G +++ DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ I K VK
Sbjct: 2 GAADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD T+ +F+++ RWL ELR H D +VIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL L AV TE+A FA++EN++FMETSALE+ NV++AF+ VLT+IY ++SK++L
Sbjct: 122 VGNKTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRAL 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G++++ KG I + D + K CC
Sbjct: 182 EKEN-----GSASVPKGETINIGRDDVSEVKKSTCC 212
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 166/224 (74%), Gaps = 6/224 (2%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + + DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL R VPT + + A+ + LFF+ETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQ--NSASKRGCCLS 223
+ + + + DV+ N T +++ G+DQ K GCC S
Sbjct: 183 VMISQELKKQDVSWMEN--GKTTVVIQGEDQVEGEPKKGGCCSS 224
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/171 (70%), Positives = 145/171 (84%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ + VKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGA+GA+LVYD+TK SF+++ RWL ELR HAD NIVIMLIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
DL LR V TEDAQ +A++E L F+ETSALEATNV+ AF T+L +IYRII
Sbjct: 127 TDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 164/215 (76%), Gaps = 11/215 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDSAVGKS LL+R+ARNEF ++SKATIGVEFQT+++ D K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +F+ + RWLDEL+ H+D NIV ML+GNKCDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+LR VP E+++ A+ E LFF+ETSAL ATNV AF V+ E+Y +S+K+L ++
Sbjct: 128 ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD---- 183
Query: 193 VAGNSNLL--KGTRI-IVPGQD---QNSASKRGCC 221
+ S LL + T++ +VP D + K CC
Sbjct: 184 -SYKSKLLSNRSTKVSLVPNGDAATKTELKKYACC 217
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 166/224 (74%), Gaps = 4/224 (1%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + ++ DY+FK+VLIGDSAVGKS LLARFARNEF SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYSEDDKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + +WL+EL H+D N+V
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRK 182
Query: 184 SLTANDEHDVAGNSNLLKGTRIIVPG---QDQNSASKRGCCLSS 224
+ + E + G L G +++ G Q+ N+ +K+G C SS
Sbjct: 183 VMMSQ-ELNKPGAPELGNGKTVVLKGDGDQEGNAGTKKGWCCSS 225
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 162/216 (75%), Gaps = 3/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L +D KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQSFD++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRA+ ++ + A++E LFF+ETSA+EA NVE AF T++TE+Y I+++K+L
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRKAL 182
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A + + L I+ +KR CC
Sbjct: 183 AAKEAAAATAS---LPSQGKIISIDSTAGNTKRACC 215
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 162/216 (75%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIG S VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL ELR HAD NIVI L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRL 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+G K L LRAVPT++A+ F+++ NL F+ TSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGTKSALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N + + + P D + +K CC
Sbjct: 182 ADRAAHDESPGNNFVDIS--VPPTTDGQNPNKLQCC 215
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 163/213 (76%), Gaps = 7/213 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDSAVGKS LL+R+ARNEF ++SKATIGVEFQT+++ D K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +F+ + RWLDEL+ H+D NIV ML+GNKCDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+LR VP E+++ A+ E LFF+ETSAL ATNV AF V+ E+Y +S+K+L + D +
Sbjct: 128 ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNS-DSYK 186
Query: 193 VAGNSNLLKGTRI-IVPGQD---QNSASKRGCC 221
SN + T++ +VP D + K CC
Sbjct: 187 PKLLSN--RSTKVSLVPNGDAATKTGLKKYACC 217
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 165/213 (77%), Gaps = 6/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ + KT+KAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +F+++ RWL ELR HA+ NIV+ML+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV T++A F+++ NL F+ETSAL+A+ V+T+F +LTEIYR++S++++ A
Sbjct: 126 KSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRRNMAAE 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ GN L + I D + +R CC
Sbjct: 186 E----GGNQPQLSTGQTISLNND--NKPRRNCC 212
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 169/223 (75%), Gaps = 6/223 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G +++ DY+FKVVLIGDS VGKS LLARF RNEF+++SK+TIGVEF T+++ ++ K +K
Sbjct: 2 GTGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K+ ++ ++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVP ++A FA+ NL F+ETSAL++TNVETAF +LTEI+R +S + +
Sbjct: 122 VGNKSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSAS----KRGCCLSS 224
+ D ++ + +K RI + N ++ K+ CC +S
Sbjct: 182 DSMDGDEI--DKVCMKPIRIDATTANTNDSAAFQIKQFCCNAS 222
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 157/215 (73%), Gaps = 4/215 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RFAR+EFS+++++TIGVEF TKT+ +D K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA++VYD+++R +FD+ RWL ELR H D NIV+ML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLVGNK 128
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV EDA FA+R F METSAL+ATNVE AF VL +IY ++S+ +L D
Sbjct: 129 ADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGD 188
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ + + +D+ S G C SS
Sbjct: 189 DPAAPPRGKTID----VSAAKDEVSPVNAGGCCSS 219
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 151/182 (82%), Gaps = 1/182 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
GD N+ DY+FKVVLIGDS VGKS LL+RF RNEFS+DSK+TIGVEF TK++ + KT+K
Sbjct: 3 GDDNE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HA+ NIV+ML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL RAVPTE+A A++ NL F+ETSAL+A+ V+ AF +LTEIYR+++KK L
Sbjct: 122 VGNKSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQL 181
Query: 186 TA 187
+
Sbjct: 182 AS 183
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +K+QIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKSQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA+GA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + + ++E+L+F+ETSALEA+NVE AF VLT+IY ++SKK++ +
Sbjct: 131 RHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSKKAVEGAEN-- 188
Query: 193 VAGNSNL-LKGTRIIVPGQDQNSASKRGCC 221
G +++ KG +I + D ++ + GCC
Sbjct: 189 --GTASVPAKGEKIDLK-NDVSALKRVGCC 215
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 158/209 (75%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D+KTVKAQIWDTA
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K ++++ WL EL+ HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPT++A+ FA++ L F+E SAL++TNVE AF +LTEIYRI+S++ L
Sbjct: 129 RHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGGQPES 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++ +++ Q A + CC
Sbjct: 189 EFSHGTTIEPIKVL---PTQQGARETPCC 214
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 163/213 (76%), Gaps = 8/213 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQIWDT 71
DY++K+VLIGDS VGKS +L+RF R+EF+++SK+TIGVEF TK++ +D K +KAQIWDT
Sbjct: 9 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 68
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+TKRQSF+++ RWL ELR HAD NIVI+L+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSD 128
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
L LRAV E+A +FA RE+L F+ETSAL+ATNVE AF +L EIY + KK + N +
Sbjct: 129 LKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQ- 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQNS---ASKRGCC 221
+ +G +I + + +S S+RGCC
Sbjct: 188 ---STTQPGRGQKIHLDEERTDSQIRQSRRGCC 217
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 163/221 (73%), Gaps = 11/221 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS +L+RF R EF+++S++TIGVEF TK++ I K VKAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++KR SFD+ ARWL ELR HAD +IV+ML+GNKCDL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNKCDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ E+A++F +L F+ETSALEATNVE AF +L +IY++ S K +
Sbjct: 136 SHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQAAGA 195
Query: 193 VAGNSNLLKG---TRIIVPG------QDQNSASKRGCCLSS 224
AG+ ++++ R+ + G Q Q+ SK CC +S
Sbjct: 196 AAGDPSMVEQQERMRVQLEGATTGALQQQHHHSK--CCSTS 234
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 161/204 (78%), Gaps = 4/204 (1%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D+KTVKAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD NIVIML+GNK DL LRA
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FA++ L F+ETSAL++TNVETAF +L+EIYRI+S++ +T E + G S
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQAESEF-GPS 208
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
+ ++ +++ Q+ A CC
Sbjct: 209 STIEPIQVLPTQQEGRQAP---CC 229
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 157/204 (76%), Gaps = 5/204 (2%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD TK Q+F + RWL ELR HADKNIVIML+GNK D +RA
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
+ T+ EFA+ L F+ETSAL+ATNVE AF +LTEIYRI+S K+L E+ +G
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL----ENGTSGQ- 185
Query: 198 NLLKGTRIIVPGQDQNSASKRGCC 221
N L +++ + Q++ +K+ CC
Sbjct: 186 NPLGDRKVVEITKSQDADAKQKCC 209
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 149/178 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L ++ KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQSFD++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+GNK DL LRAV ++ + A++E LFF+ETSA+EA NVE AF T++TE+Y I+++K
Sbjct: 123 VGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/167 (69%), Positives = 145/167 (86%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 18 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 77
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 78 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 137
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI 179
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI
Sbjct: 138 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 148/178 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L ID KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAV A+LVYD+TKRQSFD++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+GNK DL LRA+ ++ + A++E LFF+ETSA+EA NVE AF T++TE+Y I+++K
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRK 180
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 165/224 (73%), Gaps = 7/224 (3%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + + DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V
Sbjct: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL R VPT + + A+ + LFFMETSAL+++NV +AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQ--NSASKRGCCLS 223
+ + + + D N G +++ D+ SK+GCC S
Sbjct: 183 VMMSQELKKQDTPWTEN---GKTVVLQEGDREVEVESKKGCCSS 223
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 161/223 (72%), Gaps = 5/223 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MSENTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K +S++ ++RWL ELR HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPTE+A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRI-IVPG-QDQNSASKRGCC 221
SK L D +D G+S G I + P Q++ S CC
Sbjct: 181 SKHQL---DTNDTVGSSKPSGGPTISLTPAPQEKRSGKNSNCC 220
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 151/181 (83%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYR
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+GNK DL LR+V
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 208
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSN 198
PT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K + E DV SN
Sbjct: 209 PTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSN 268
Query: 199 L 199
+
Sbjct: 269 V 269
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI 59
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 158/209 (75%), Gaps = 7/209 (3%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K DY+FKVVL GDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ ID +T+KAQIWD
Sbjct: 12 KYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQIWD 71
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRA+T+AYYRGAVGA+LVYD+TKR++F+++ WL ELRGHA+ +IVIML+GNKC
Sbjct: 72 TAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGNKC 131
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL LR + TEDA+ +A+R LFFMETSALE+T VE AF ++L I+ + +N +
Sbjct: 132 DLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIFEAVRSHPPASNVD 191
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRG 219
++ N I+ P D +SK G
Sbjct: 192 MKMSPYPN----QPIVSPNTD---SSKSG 213
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 156/203 (76%), Gaps = 3/203 (1%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYR
Sbjct: 19 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 78
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+GNK DL LRAV
Sbjct: 79 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 138
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSN 198
PT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K + E D N
Sbjct: 139 PTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDTIRPQN 198
Query: 199 LLKGTRIIVPGQDQNSASKRGCC 221
+ +I V ++ CC
Sbjct: 199 V---EQIEVKPTMNAEGVRKQCC 218
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 167/220 (75%), Gaps = 5/220 (2%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
Y Q DY+FK+VLIGDSAVGKS LLAR+ARNEF +SK+TIGVEFQT+T+ ID K +
Sbjct: 4 YAGEEQTEDYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEI 63
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQER+RAVTSAYYRGAVGA++VYD+++RQ+FD+++RWLDEL H+D N+V +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTV 123
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
++GNK DL R V TE+ A+ +N++F+ETSAL++TNV+ AF TV+ EIY I+S+K
Sbjct: 124 IVGNKTDLLDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILSRKV 183
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG---CC 221
L+ ++ + SN T ++ + +++A + G CC
Sbjct: 184 LSCQEQKLESKISN--GKTVVLQEAESESTAKQTGKLWCC 221
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 9/212 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF+ SKATIGVEFQT++++I+ K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+T+R +FD++ RWL EL H+D + ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
G +R VP E+ + A+ E LFFMETSAL+ATNV TAF V+ EIY +S+K L + D +
Sbjct: 131 GDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVLNS-DSYK 189
Query: 193 VAGNSNLLKGTRIIVPG---QDQNSASKRGCC 221
L R+ + G +Q S+ GCC
Sbjct: 190 AE-----LSLNRVSIDGDSKDEQKQGSRFGCC 216
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 161/218 (73%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
GD Q DY+FK+VL+GDS+VGKS LLARFARNEF +SK+TIGVEFQT+ L ID K +K
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 125 VGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVF 184
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ ++ +L G +++ ++ ++ R CC S
Sbjct: 185 QSQEQK--RSEQSLSNGKPVMLSDSNEPTSGGRWCCSS 220
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 9/212 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEFS+ SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+++R +FD++ RWL EL H+D + ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R VP E+ + A+ E LFFMETSAL+ATNV TAF V+ EIY +S+K L + D +
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKILNS-DSYK 189
Query: 193 VAGNSNLLKGTRIIVPG---QDQNSASKRGCC 221
L R+ + G D+ S+ GCC
Sbjct: 190 AE-----LSLNRVSIDGDSKDDKKQTSRFGCC 216
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 152/209 (72%), Gaps = 6/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL+GDS VGKS LL+RF RNEF ++SK+TIGVEF T+T+ I +K +KAQIWDTA
Sbjct: 9 DYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T + +F ++ +WL ELR HAD NIVIML+GNKCDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNKCDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR + AQ+FA E+L F+ETSAL+ATNVETAF+ L+ +Y ++SK +E
Sbjct: 129 AQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQAVNAEETS 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
N ++L + + K CC
Sbjct: 189 NKQNRSIL------ISAAEDGFRPKSKCC 211
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 164/217 (75%), Gaps = 18/217 (8%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+K+QIWDTAGQERY
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 78
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 79 RAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 138
Query: 138 VPTEDAQEFAQRE---------NLFFMETSALEATNVETAFLTVLT----EIYRIISKKS 184
VPTE+A++FA + NL F+ETSAL+A+NVE AF +LT EI+RI+S K+
Sbjct: 139 VPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKA 198
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
L + D ++N L +++ + +S K+GCC
Sbjct: 199 LESGD-----SSANQLGDRKVVEITKTPDSEKKQGCC 230
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 162/222 (72%), Gaps = 1/222 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPTE+A+ FAQ NL F+E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPG-QDQNSASKRGCC 221
SK L N++ V + T + P Q + + + GCC
Sbjct: 181 SKHQLDTNEQGGVNKPTTAGGPTISLTPAPQSKKNKNNGGCC 222
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 156/215 (72%), Gaps = 4/215 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RFAR+EFS+++++TIGVEF TKT+ +D K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA++VYD+++R +FD+ RWL E R H D NIV+ML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLVGNK 128
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV EDA FA+R F METSAL+ATNVE AF VL +IY ++S+ +L D
Sbjct: 129 ADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGD 188
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ + + +D+ S G C SS
Sbjct: 189 DPAAPPRGKTID----VSAAKDEVSPVNAGGCCSS 219
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 163/214 (76%), Gaps = 6/214 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D K VKAQIW
Sbjct: 6 EEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQIW 65
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA++VYD+ K +++++ RWL EL+ HAD NIVIML GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGNK 125
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
CDL LRAV TE+A++FA++ +L F+ETSAL++TNVE AF +LTEIY I+ +K+
Sbjct: 126 CDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKAPADGG 185
Query: 190 EHDVAGNSNLLKGTRIIV--PGQDQNSASKRGCC 221
+ S T++I +D+ S SK CC
Sbjct: 186 QGGGGSVSE----TKVIKIDDQKDEKSGSKMKCC 215
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 162/212 (76%), Gaps = 5/212 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY++K+VLIGDS VGKS LL+RF RNEFS+++K+TIGVEF T+T+ + KT+KAQ+W
Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 67
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+ K+ ++ + RW+ ELR +AD+NI IML+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNK 127
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LR V T++A+EF+++ L F+ETSAL+++NVE AF +LT+IY I+S+ S +
Sbjct: 128 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTGP 187
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + N+ II+P + A+K GCC
Sbjct: 188 QTTIDSNTET-----IILPTTSEPPAAKSGCC 214
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 167/225 (74%), Gaps = 11/225 (4%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
Y + + DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K +
Sbjct: 4 YNEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEI 63
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQER+RAVTSAYYRGAVGA++VYD+++RQ+FD + RWL+EL H+D N+V +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKV 183
Query: 185 LTAND--EHDVA----GNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + + +H+V G S +++G + GQ SK+GCC S
Sbjct: 184 MMSQELTKHEVPRIENGKSVVIQGENLEADGQ-----SKKGCCSS 223
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 161/217 (74%), Gaps = 10/217 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VL+GDSAVGKS LLARFARNEF +SK+TIGVEFQT+ L I+ K VKAQIWDTA
Sbjct: 12 DYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL+ H+D N+V +L+GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K + + H+
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMS---HE 188
Query: 193 VAGNSNLLKGTRIIVPGQDQN------SASKRGCCLS 223
+ L G +++ G D+N S GCC S
Sbjct: 189 LKKQDAPLDGKTVVLQG-DENQERATESPKSGGCCSS 224
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 166/224 (74%), Gaps = 7/224 (3%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + + DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V
Sbjct: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQNSA--SKRGCCLS 223
+ + + + DV + + G +++ G+ A SK+GCC S
Sbjct: 183 VMISQELNKQDV---TRIENGKTVVLQGEGDVEAAQSKKGCCSS 223
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
GD Q DY+FK+VL+GDS+VGKS LLARFARNEF +SK+TIGVEFQT+ L ID K +K
Sbjct: 5 GDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+T+RQ+FD + RWL+EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVVTIL 124
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
IGNK DL R V + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 125 IGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILSRKVF 184
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG---CCLS 223
+ ++ S L + +V D SA+ G CC S
Sbjct: 185 QSQEQKKSELQS--LSNGKAVVLQSDAPSATSSGGRWCCSS 223
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 17/220 (7%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS +L+RF RNEF++DSK+TIGVEF T++L +D KT+KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K+ SF ++ RWL EL+ HAD NIVIML+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQREN-----------LFFMETSALEATNVETAFLTVLTEIYRIIS 181
LRAVPT +AQ + + ++ + F+ETSAL++TNVE AF +LT+IY++++
Sbjct: 129 KHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLVA 188
Query: 182 KKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
K+L D + G I V + K GCC
Sbjct: 189 TKALEGGD------SIKPTNGETINVQPTSDSDNKKAGCC 222
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 162/222 (72%), Gaps = 6/222 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
GD Q DY+FK+VL+GDS+VGKS LLARFARNEF +SK+TIGVEFQT+ L ID K +K
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+T+RQ+FD + RWL+EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
IGNK DL R V T + + A+ + LFFMETSAL+++NV+ AF TV+ EIY I+S+K
Sbjct: 125 IGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILSRKVF 184
Query: 186 TANDEH--DVAGNSNLLKGTRIIVPGQDQNSA-SKRGCCLSS 224
++ D+ SN G +++ A S RG C SS
Sbjct: 185 QCQEQKRSDLQSLSN---GKAVVLQTDAPKEANSGRGWCCSS 223
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 148/176 (84%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT++L ID K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R +FD ++RWLDEL+ H D + +ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++RAV E+ + A+ + LFFMETSAL++TNV TAF V+ EIY +S+K L ++
Sbjct: 131 ENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVLNSD 186
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF R+ F ++SK+TIGVEF T+ ++ID K +KAQIWDTA
Sbjct: 14 DYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTA 73
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+ K QSF ++ WL+ELR HA+KNIV+ML+GNKCDL
Sbjct: 74 GQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDL 133
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V TEDA+ FAQ++ L F+ETSAL++TNVE AF +L +IY I+S N +
Sbjct: 134 RHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVSSHPPVNNVDMK 193
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGC 220
++ ++N I+ P D S +R C
Sbjct: 194 MSLHNN----QPIVSPNADNASGGRRCC 217
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 148/177 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L +D KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQSF+++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
+GNK DL LRA+ ++ + A++E LFF+ETSA+EA NVE AF T++TE+Y I+++
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNR 179
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF R+ F ++SK+TIGVEF T+ ++ID K +KAQIWDTA
Sbjct: 14 DYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTA 73
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+ K QSF ++ WL+ELR HA+KNIV+ML+GNKCDL
Sbjct: 74 GQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDL 133
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V TEDA+ FAQ++ L F+ETSAL++TNVE AF +L +IY I+S N +
Sbjct: 134 RHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNNIDMK 193
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGC 220
++ ++N I+ P D S +R C
Sbjct: 194 MSLHNN----QPIVSPNADNASGGRRCC 217
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 160/221 (72%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPTE+A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SK L N++ + SN + P + ++S + CC
Sbjct: 181 SKHQLDTNEQGGLKAPSNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 148/177 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGD+ VGKS +L+RF RN FS+DSK+TIGVEF TK+L ++ KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQSFD++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
+GNK DL LRAV ++ + A++E LFF+ETSA+EA NVE AF T++TE+Y I+++
Sbjct: 123 VGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNR 179
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 160/221 (72%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPTE+A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SK L N++ + SN + P + ++S + CC
Sbjct: 181 SKHQLDTNEQGGLKAASNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 147/178 (82%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L ID KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAV A+LVYD+TKRQSFD++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+GNK DL LRA+ ++ + A++E LFF+ET A+EA NVE AF T++TE+Y I+++K
Sbjct: 123 VGNKSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRK 180
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 156/211 (73%), Gaps = 8/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RN+F+++SK+TIGVEF T+++ D KT+KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++K +++++ RWL+ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIIS--KKSLTANDE 190
LRAVPTE A A++ L F+ETSAL++TNVE AF +LTEI+ I++ K+ T D
Sbjct: 128 RHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQLETKKDS 187
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V G T ++ G D CC
Sbjct: 188 QSVDGE------TEVVQVGGDPAPKKAGACC 212
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/167 (68%), Positives = 144/167 (86%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 6 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 65
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 66 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 125
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI 179
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI
Sbjct: 126 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 146/172 (84%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 20 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 79
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 80 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 139
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIY
Sbjct: 140 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 162/210 (77%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FKVV+IGDS VGK+ +L RF R+EF++DSK+TIGVEF T+T++ID+K +KAQIWDTA
Sbjct: 6 DFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIWDTA 65
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+L+YD+T QS+ +++RWL EL+ HAD NIV+ML+GNKCDL
Sbjct: 66 GQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNKCDL 125
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY-RIISKKSLTANDEH 191
LRAVPTE+A++FA + L F+ETSAL+ T+V AF +LTEIY R+ + +++ AN E
Sbjct: 126 KHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAENVHANLED 185
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +GT I + Q +S K C
Sbjct: 186 ----SRKPQQGTTISLTPQPGDSDKKSSSC 211
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 161/224 (71%), Gaps = 7/224 (3%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS+ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MSDNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPT++A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRII--VPG-QDQNSASKRGCC 221
SK L +D N+N G I P Q++ S S CC
Sbjct: 181 SKHQLDTSD----GANANKPSGGPTISLTPAPQEKKSKSSSNCC 220
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 165/216 (76%), Gaps = 11/216 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEFS +SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 53 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 112
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R +F+ + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 113 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 172
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++RAV E+ + A+ E LFF+ETSAL++TNV+TAF V+ +IY +S+K L ++ D
Sbjct: 173 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 232
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR----GCCLSS 224
L R+ + +D NSASK+ CC S+
Sbjct: 233 E------LTVNRVSLV-KDDNSASKQSSGFSCCSST 261
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 161/209 (77%), Gaps = 6/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF+ +SKATIGVEFQT+ + ID K VKAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD++ARWL+EL+ HAD N+V ML+GNK DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+R VP ED ++ A+ E LFF+ETSAL+ TNV AF V+ EIY +SKK L + D +
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNS-DSYK 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ N +K I+ G+D +K CC
Sbjct: 187 SELSLNRVK----IMDGEDP-PKTKYSCC 210
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 165/216 (76%), Gaps = 11/216 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEFS +SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R +F+ + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++RAV E+ + A+ E LFF+ETSAL++TNV+TAF V+ +IY +S+K L ++ D
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR----GCCLSS 224
L R+ + +D NSASK+ CC S+
Sbjct: 190 E------LTVNRVSLV-KDDNSASKQSSGFSCCSST 218
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 157/215 (73%), Gaps = 4/215 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FKVVLIGDS VGKS LL+RFAR+EFS+++++TIGVEF TKT+ +D K VKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA++VYD+T+R +FD+ RWL ELR H D NIV+ML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGNK 128
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LRAV EDA FA+R F METSAL+ATNV+ AF VL +IY ++S+ +L +
Sbjct: 129 ADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNALDIGE 188
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
+ + + +D+ S G C S+
Sbjct: 189 DPAAPPRGKTID----VGAAKDEVSPVNTGGCCSA 219
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 159/212 (75%), Gaps = 9/212 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+++R +FD++ RWL EL H+D + ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R VP E+ + A+ E LFFMETSAL++TNV TAF V+ EIY +S+K L + D +
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNS-DSYK 189
Query: 193 VAGNSNLLKGTRIIVPG---QDQNSASKRGCC 221
L R+ + G DQ +++ GCC
Sbjct: 190 AE-----LSLNRVSIEGDSKDDQKQSNRFGCC 216
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 6/223 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MADNSDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
I+I L+GNK DL LRAVPTE+A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRI-IVPG-QDQNSASKRGCC 221
SK L ND + +N G I + P Q++ + + GCC
Sbjct: 181 SKHQLENND----SKQTNTAGGPTISLTPAPQEKKNKNNGGCC 219
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 159/217 (73%), Gaps = 10/217 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VL GDSAVGKS LLARFARNEF DSK+TIGVE QT+ L I+ K VKAQIWDTA
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL+ H+D N+V +L+GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K + + H+
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMS---HE 188
Query: 193 VAGNSNLLKGTRIIVPGQDQN------SASKRGCCLS 223
+ L G +++ G D+N S GCC S
Sbjct: 189 LKKQDAPLDGKTVVLQG-DENQERATESPKSGGCCSS 224
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/219 (58%), Positives = 159/219 (72%), Gaps = 13/219 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL+GDS VGKS LL+RF RN FS+DSK+TIGVEF T+T+ +D KT+KAQIWDTA
Sbjct: 17 DYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 76
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD-KNIVIMLIGNKCD 131
GQERYRA+TSAYYRGA GA+LVYD+T+ +F+ ARWL ELR HAD + +ML+GNK D
Sbjct: 77 GQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTD 136
Query: 132 L---GS------LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
L GS RAVP DA A+RE L F+ETSAL+ATNV+ AF T+LTEIYR +S+
Sbjct: 137 LARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSR 196
Query: 183 KSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
K+L A+ D AG + +G I V D + R CC
Sbjct: 197 KALAASSAGDDAG--AVGEGQAIQVSASDSAGLTTR-CC 232
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 148/186 (79%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 130 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 189
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 190 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 249
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LT +R +
Sbjct: 250 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGRHRAWPRAGW 309
Query: 186 TANDEH 191
+ H
Sbjct: 310 GGHQPH 315
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 163/219 (74%), Gaps = 4/219 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF N+F+++SK+TIGVEF T+T+ +++K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K+ S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+A+ FAQ L F ETSAL + NV+ AF ++T IY++ISK +
Sbjct: 125 GNKSDLSHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVD 184
Query: 187 ANDEHDVAGN--SNLLKGTRI-IVPGQDQNS-ASKRGCC 221
+++ +GN SN +KG I + P ++ + +S CC
Sbjct: 185 LGSDNNGSGNGASNNIKGPTISLTPTPNEKTKSSSNNCC 223
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 161/222 (72%), Gaps = 3/222 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS+ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MSDNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPT++A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPG-QDQNSASKRGCC 221
SK L N+ + GN T + P Q++ S + CC
Sbjct: 181 SKHQLDTNEGSN--GNKPSGGPTISLTPAPQEKKSKNNSNCC 220
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/231 (53%), Positives = 164/231 (70%), Gaps = 31/231 (13%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 138 VPTEDAQEFA---------------------------QRENLFFMETSALEATNVETAFL 170
VPT++A+ FA ++ L F+ETSAL++TNVE AF
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEKNGLSFIETSALDSTNVEAAFQ 186
Query: 171 TVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
T+LTEIYRI+S+K ++ E+D++ ++N++ I VP +N K CC
Sbjct: 187 TILTEIYRIVSQKQMSDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 233
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 157/213 (73%), Gaps = 10/213 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 13 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 72
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+++R +FD++ RWL EL H+D + ML+GNKCDL
Sbjct: 73 GQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 132
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R VP E+ + A+ E LFFMETSAL++TNV TAF V+ EIY +S+K L + D +
Sbjct: 133 DNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKILNS-DSYK 191
Query: 193 VAGNSNLLKGTRIIVPGQD----QNSASKRGCC 221
L R+ + D Q S+ GCC
Sbjct: 192 AE-----LSLNRVSIDDSDSKDGQKQTSRFGCC 219
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 165/216 (76%), Gaps = 11/216 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEFS +SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R +F+ + RWLD+L+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++RAV E+ + A+ E LFF+ETSAL++TNV+TAF V+ +IY +S+K L ++ D
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR----GCCLSS 224
L R+ + +D NSASK+ CC S+
Sbjct: 190 E------LTVNRVSLV-KDDNSASKQSSGFSCCSST 218
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/227 (53%), Positives = 167/227 (73%), Gaps = 10/227 (4%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + + DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V
Sbjct: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQ-----NSASKRGCCLS 223
+ + + + DV + + G +++ G+ + ++ SK+ CC S
Sbjct: 183 VMMSQELNKQDV---TRIENGKTVVLQGEGEGDGEADAQSKKRCCSS 226
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 161/223 (72%), Gaps = 6/223 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MTDNADDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPT++A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRI-IVPG-QDQNSASKRGCC 221
SK L E++ N G I + P +++NS S CC
Sbjct: 181 SKHQL----ENNADSNKQSTSGPTISLTPAPKEKNSKSNSNCC 219
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 146/175 (83%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+ L ID K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD + RWLDEL+ H D + +ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
++RAV ++ + A+ E LFFMETSAL++TNV+TAF V+ EIY +S+K L +
Sbjct: 131 ENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLNS 185
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 156/209 (74%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++ K+VLIGDS VGK+ LL+RFAR++F+ DSK+TIGVEF TKTL I+ KTVKAQIWDTA
Sbjct: 7 DFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA+GA+L+YD+T +F+ ++RWL ELR +AD NIV+ML+GNK DL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TED F+Q+ENL F+ETSA ATNV+ AF T++TEI +SK+++ + D
Sbjct: 127 QELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVSPDSPA 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G + KG I D + K CC
Sbjct: 187 KVGPN---KGVTITSTTAD-DKKKKNTCC 211
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQIWDT 71
DY++K+VLIGDS VGKS +L+RF R+EF+++SK+TIGVEF TK++ +D K +KAQIWDT
Sbjct: 9 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 68
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+TKRQSF+++ RWL ELR HAD NIVI+L+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSD 128
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
L LRAV E+A +FA RE+L F+ETSAL+ATNVE AF +L EIY + KK + N +
Sbjct: 129 LKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQ 187
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 166/216 (76%), Gaps = 11/216 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEFS +SKATIGVEFQT++++I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R +F+ + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++RAV ++ + A+ E LFF+ETSAL++TNV+TAF V+ +IY +S+K L ++ D
Sbjct: 130 ENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR----GCCLSS 224
L R+ + +D NSASK+ CC S+
Sbjct: 190 ------KLTVNRVSLV-KDDNSASKQSSGFSCCSST 218
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 146/173 (84%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KTVK
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVETAF T+LTE R
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEEQR 174
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 146/176 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL R+ARNEF+ +SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+ +F+++ RWLDEL H+D + MLIGNKCDL
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
S+RAV E+ + A+ E LFFMETSAL++TNV+TAF V+ EIY IS+K L ++
Sbjct: 129 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSD 184
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK++ ID +T+KAQI
Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+T+AYYRGAVGA+LVYD+TKR++F+++ WL ELR + + ++V+ML+GN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGN 129
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL LR V TEDA+ +A+R LFFMETSALE+T VE AF +L I+ + +N
Sbjct: 130 KCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAVRSHPPVSN 189
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++ +N I+ P D +S S R CC
Sbjct: 190 VDMKMSPYNN----QPIVSPNTD-SSKSGRRCC 217
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 145/175 (82%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FKVV+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT++L ID K VKAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QER+RAVTSAYYRGAVGA++VYD+++R +FD + RWLDEL+ H D + +ML+GNKCDL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V E+ + A+ E LFFMETSAL++TNV+TAF V+ EIY +S+K L ++
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSD 188
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 158/213 (74%), Gaps = 10/213 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF+ SKATIGVEFQT+T+ ID K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+++R +FD++ RWL EL H+D + ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R VP E+ + A+ E LFFMETSAL++TNV TAF V+ EIY +S+K L + D +
Sbjct: 131 ENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNS-DSYK 189
Query: 193 VAGNSNLLK----GTRIIVPGQDQNSASKRGCC 221
N + G++ GQ Q S+ GCC
Sbjct: 190 AELTLNRVSIHNDGSK---DGQKQ--GSRFGCC 217
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 146/176 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL R+ARNEF+ +SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+ +F+++ RWLDEL H+D + MLIGNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
S+RAV E+ + A+ E LFFMETSAL++TNV+TAF V+ EIY IS+K L ++
Sbjct: 130 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSD 185
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 145/172 (84%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 20 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 79
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAG ERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 80 AQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 139
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIY
Sbjct: 140 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 145/175 (82%), Gaps = 4/175 (2%)
Query: 3 NLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHK 62
N+ G+Y D +FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++S+D K
Sbjct: 37 NMAGEY----DLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTK 92
Query: 63 TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIV 122
T+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K ++ ++ RWL EL+ HAD NIV
Sbjct: 93 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIV 152
Query: 123 IMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
IML+GNK DL LRAVPTE+A++FA E L F+ETSAL+A+NVE AF T+LT Y
Sbjct: 153 IMLVGNKSDLRHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 169/216 (78%), Gaps = 12/216 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDSAVGKS LL+R++RNEF ++S+ATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGAM+VYD++++Q+F+++ RWL+ELR ++D ++V ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
SLR V E+A + A+RE LFF+ETSAL++TNV AF TV+ EI+ ++SKK L+++
Sbjct: 130 ESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSD---- 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-----GCCLS 223
+ + L GT+ + G + ++SK CC S
Sbjct: 186 -SSKAGTLSGTKKL--GLENGNSSKPQDSGLSCCSS 218
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 162/216 (75%), Gaps = 10/216 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF+ SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +F+ + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
S+RAV E+ + A+ E LFFMETSAL++TNV+TAF V+ +IY IS+K L ++
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSD---- 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG----CCLSS 224
+ L R+ + +D N +S +G CC SS
Sbjct: 186 -TYKTELSMKNRVSLV-KDDNKSSTQGFGFSCCSSS 219
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 144/169 (85%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVETAF +LT
Sbjct: 122 VGNKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 156/218 (71%), Gaps = 8/218 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS +L+RF R EF+++S++TIGVEF TK++ I K VKAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++KR SF++ ARWL ELR HAD +IV+ML+GNKCDL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV ++A++F +L F+ETSALEATNVE AF +L +IY++ S K D
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLRAGAD 192
Query: 193 VAGNSNLLKGTRIIVPG------QDQNSASKRGCCLSS 224
+ R+ + G Q Q SK CC SS
Sbjct: 193 TPSIEEQQERMRVQLEGATSGGQQIQTHHSK--CCASS 228
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 157/202 (77%), Gaps = 2/202 (0%)
Query: 20 LIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRA 79
LIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVP 139
+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+GNK DL LRAVP
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 140 TEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNL 199
T++A+ FA+R L F+ETSAL++TNVETAF +LTEIYRI+S+K + + + N+
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIVILQKEILIRPHNV 183
Query: 200 LKGTRIIVPGQDQNSASKRGCC 221
+ + P ++ ++ CC
Sbjct: 184 EQID--VKPTGERGQWFRKQCC 203
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 169/216 (78%), Gaps = 12/216 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDSAVGKS LL+R++RNEF ++S+ATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGAM+VYD++++Q+F+++ RWL+ELR ++D ++V ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
SLR V E+A + A+RE LFF+ETSAL++TNV AF TV+ EI+ ++SKK L+++
Sbjct: 130 ESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSD---- 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-----GCCLS 223
+ + L GT+ + G + ++SK CC S
Sbjct: 186 -SSKARTLSGTKKL--GLENGNSSKPQDSGLSCCSS 218
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 143/176 (81%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+VLIGDSAVGKS LL+RFARNEF +SKATIGVEFQT+T+ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA++VYD+++R +FD + RWLDEL D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
SLR V TE+ + FA+ E LFFMETSAL++TNV+ AF V+ EIY IS+K L ++
Sbjct: 130 ESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSD 185
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 144/176 (81%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL R+ARNEF++ SKATIGVEFQT+TL ID K VKAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA++VYD+T+R +FD + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++RAV E+ + A+ E +FFMETSAL+ATNV AF V+ EIY +S+K L ++
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSD 177
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 160/223 (71%), Gaps = 5/223 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K ++++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPTE+A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRI-IVPG-QDQNSASKRGCC 221
SK L D +D N G I + P Q++ S + CC
Sbjct: 181 SKHQL---DTNDGGSNKPTTGGPTISLTPAPQEKRSKNNSNCC 220
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 145/176 (82%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L ++ KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQSF+++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIIS 181
+GNK DL LR+V + + A++E LFF+ETSA+EA NVE AF T++ E+Y I++
Sbjct: 123 VGNKSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVN 178
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 157/211 (74%), Gaps = 4/211 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+FK+VLIGDS VGKS LL+RF R+ F+++SK+TIGVEF T+ ++ID K +KAQIW
Sbjct: 11 EEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQIW 70
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+ QSF ++ WL EL HA+KNIV+ML+GNK
Sbjct: 71 DTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGNK 130
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
CDL LR+V TEDA+ FAQ++ L F+ETSAL++TNVE AF +L IY I+S N
Sbjct: 131 CDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVSSHPPVNNI 190
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGC 220
+ ++ ++N I+ P D S +R C
Sbjct: 191 DMKMSLHNN----QPIVSPNADNASGGRRCC 217
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 159/221 (71%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGA+GA++VYD+ K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPT++A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IVIELVGNKSDLDHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SK L N++ + +N + P + + + GCC
Sbjct: 181 SKHQLDTNEQGGLKAATNGPTISLTPAPKERNRNKNNGGCC 221
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 153/216 (70%), Gaps = 4/216 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS +L+RF R EF+++S++TIGVEF TK++ I K VKAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++KR SF++ ARWL ELR HAD +IV+ML+GNKCDL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV ++A++F +L F+ETSALEATNVE AF +L +IY++ S K D
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLRAGAD 192
Query: 193 VAGNSNLLKGTRIIVPGQ----DQNSASKRGCCLSS 224
+ R+ + G Q CC SS
Sbjct: 193 TPSIEEQQERMRVQLEGATSGGQQIQTHHSNCCASS 228
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 149/197 (75%), Gaps = 4/197 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DYVFKVV+IGDS VGK+QLL RF R+EF +DSK+TIG+EFQT+T+ + K VKAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRAVTSAYYRGA+GAMLVYD+T+R SF+H ARW+ ELR HADK+IV++LIGNK DL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 133 G----SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
RAV E+A FA+ + LFF E SAL NVE AFL +L EI+ +S++ L +
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPLEVD 191
Query: 189 DEHDVAGNSNLLKGTRI 205
D +LKGTR+
Sbjct: 192 DGGAGGDGELMLKGTRL 208
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 158/216 (73%), Gaps = 4/216 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY+ +Y++K+VLIGDS VGKS LL+RF R+EF++DS++TIGVEF T+TL ID K VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKA 66
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K +S++ ++RWL EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELV 126
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT++A+ FA +L F E SAL + NV+ +F +L IY +ISK L
Sbjct: 127 GNKSDLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLE 186
Query: 187 ANDEHDVAGNSNLLKGTRIIVP-GQDQNSASKRGCC 221
+D+ +S T + P Q++ S + CC
Sbjct: 187 TDDQPSAKPSSG---ATISLTPVPQEKKSKNNANCC 219
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 145/175 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+ L ID K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD + RWLDEL+ H D + +ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
++RAV ++ + A+ E LFFMETSAL++TNV+ AF V+ EIY +S+K L +
Sbjct: 131 ENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVLNS 185
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 161/223 (72%), Gaps = 10/223 (4%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI- 59
MS + DY DY+FKVVLIGDS VGKS LL+RF RNEF +SK+TIGVEF T+ + +
Sbjct: 1 MSKDHDDY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVC 56
Query: 60 -DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD 118
+ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +S+D++ +WL ELR HAD
Sbjct: 57 LEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHAD 116
Query: 119 KNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
NIVI L+GNK DL LR+V E A EF+ E L F+ETSA E+TNV+ AF LT++Y
Sbjct: 117 SNIVITLVGNKTDLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYH 176
Query: 179 IISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
IISKKS ++ + D G + +++ + I +N + CC
Sbjct: 177 IISKKSCSSAEVDDKNGGAGIIE-VKAISESSKKNPSK---CC 215
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 145/176 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+ + ID K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD + RWLDEL+ H+D + +ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V ED A+ E LFFMETSAL++TNV+ AF V+ EIY +S+K L ++
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSD 186
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 160/234 (68%), Gaps = 29/234 (12%)
Query: 13 DYVFKVVLIGDSAVGKS-------------------------QLLARFARNEFSVDSKAT 47
DY+FKVVLIGDS VGKS LL+RF RNEF++++K+T
Sbjct: 8 DYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKST 67
Query: 48 IGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA 107
IGVEF T+++++D KT+KAQIWDTAGQERYRA+T+AYYRGAVGA+LVYD+ K ++ +
Sbjct: 68 IGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDVT 127
Query: 108 RWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVET 167
RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA L F+ETSAL+A+NVE+
Sbjct: 128 RWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNVES 187
Query: 168 AFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
AF T+LT+IYRI+S KSL + + + + + + P D N+ CC
Sbjct: 188 AFQTILTDIYRIVSSKSLEQSSDPIKPSSGDSIT----VAPSVDSNTNQNSKCC 237
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 161/216 (74%), Gaps = 10/216 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF+ SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +F+ + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
S+RAV E+ + A+ E LFFMETSAL++TNV+TAF V+ +IY +S+K L ++
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQLNSD---- 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG----CCLSS 224
+ L R+ + +D N S +G CC SS
Sbjct: 186 -TYKTELSMKNRVSLV-KDDNKGSTQGFGFSCCSSS 219
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 148/176 (84%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD + RWLDEL+ H+D + +ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V E+A+ A+ E LFFMETSAL++TNV+ AF V+ EIY +S+K L ++
Sbjct: 130 ENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSD 185
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 165/217 (76%), Gaps = 5/217 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY++K+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + K +KAQI
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQI 64
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++KR SF+++ RWL ELR HAD NIV++L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL +LR V E+A F++RE + ME SAL ++NV+ AF +L+EIY + S++ LTAN
Sbjct: 125 KSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTAN 184
Query: 189 DEHDVAGNSNLL--KGTRIIVPGQDQNS--ASKRGCC 221
+HD+ + L +G R+ D NS + KR CC
Sbjct: 185 -QHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 161/212 (75%), Gaps = 7/212 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + ++K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+TK+ SF+++ +WL ELR +AD NIVI+L+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
L LR + DA ++A++E L F+ETSALEATNVE AF +L EIY + KK T ND++
Sbjct: 129 LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKNDDN 188
Query: 192 DVAGNSNLLKGTRIIV-PGQDQNSASKRG-CC 221
S +G +I V D+N K+ CC
Sbjct: 189 ----LSIQPRGKKINVDDDNDKNETKKKNKCC 216
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 147/176 (83%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD + RWLDEL+ H+D + +ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V E+ + A+ E LFFMETSAL++TNV+ AF V+ EIY +S+K L ++
Sbjct: 130 ENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSD 185
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 143/176 (81%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+VLIGDSAVGKS LLARFARNEF +SKATIGVEFQT+ + I+ K +KAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R SFD + RWL+EL H D ML+GNKCDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V E+ + A+ E+LFFMETSAL++TNVE AF V+ EIY +S+K+L ++
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNSD 187
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 145/180 (80%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
GD Q DY+FK+VL+GDS+VGKS LLARFARNEF +SK+TIGVEFQT+ L ID K +K
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL+EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL R V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K L
Sbjct: 125 VGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKDL 184
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 167/215 (77%), Gaps = 10/215 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDSAVGKS LL R+ARNEF+ +SKATIGVEFQT+++ I+ K VKAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA+GA++VYD+T++Q+F+++++WLDELR + ++V ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R V E+ +E A+ ENLFFMETSAL +TNV+TAF V+ EI+ S++ + D++D
Sbjct: 131 TNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVP--DDYD 188
Query: 193 VAGNSNLLKGTRIIVPG-----QDQNSASKR-GCC 221
+ + +G ++ + G Q+ A++R CC
Sbjct: 189 --KDDRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 144/172 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAG ERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVI L
Sbjct: 62 AQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXL 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIY
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 164/216 (75%), Gaps = 8/216 (3%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+IDYVFKVV++GDSAVGK+QLL RF ++EF +DSK+TIGVEFQT+TL++ K VKAQIWD
Sbjct: 26 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 85
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GAM+VYD+T+R++F+++ARW++ELR HAD + V+ LIGNK
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 145
Query: 131 DL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
D+ S R V ++A FA+ + LFF E SAL NVE AFLT+L EI+ ++S+++L ++
Sbjct: 146 DMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALELDE 205
Query: 190 EHDV------AGNSNL-LKGTRIIVPGQDQNSASKR 218
+ AG L LKGT + V + SA K+
Sbjct: 206 ARRMRNGGAGAGGEVLSLKGTTLDVGSIMETSAMKK 241
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/161 (69%), Positives = 139/161 (86%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++S+D KTVKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K ++ ++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
VPTE+A+ F+ L F+ETSAL+A+NVE+AF T+LT++YR
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 160/222 (72%), Gaps = 3/222 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y+FK+VLIGDS+VGK+ LL+RF R+EF+ DS+ATIGVEF T+TL I+
Sbjct: 1 MADTADDYSYDYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEIN 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+T+AYYRGAVGA++VYD++ S++ ++RWL E++ HAD N
Sbjct: 61 GKRIKAQIWDTAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVI L+GNK DL LRAVPTE+A+ FA NL F E SAL A NVE F ++ IY ++
Sbjct: 121 IVIALVGNKSDLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPG-QDQNSASKRGCC 221
SK+ DE+ VA N +L T + P +D+ + CC
Sbjct: 181 SKRKFDM-DENGVA-NKDLNSKTITLTPAPKDKKVSKNSNCC 220
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 157/223 (70%), Gaps = 5/223 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID
Sbjct: 1 MADNSDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K +S++ ++RWL EL+ HAD N
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
I+I L+GNK DL LRAVPTE+A+ FA NL F E SAL + NV+ +F +L IY +I
Sbjct: 121 IIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCCL 222
SK L ND + +N G I + P + G L
Sbjct: 181 SKHQLENND----SKQTNTAGGPTISLTPAPQEKKNKNNGWLL 219
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 147/181 (81%), Gaps = 1/181 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ +IDYVFKVV++GDSAVGK+QLL RFA++EF +DSK+TIGVEFQT+TL++ K VK
Sbjct: 16 GEKEGEIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVK 75
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRAVTSAYYRGA+GAM+VYD+T+R +FDH+ RW++ELR HAD + V+ L
Sbjct: 76 AQIWDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVAL 135
Query: 126 IGNKCDLGS-LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
+GNK D + R VP ++A FA+ + LFF E SAL NVE AFL +L E++ ++S+++
Sbjct: 136 VGNKADAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRA 195
Query: 185 L 185
L
Sbjct: 196 L 196
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 141/165 (85%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVI L+GNK DL
Sbjct: 63 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKSDL 122
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIY
Sbjct: 123 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 154/211 (72%), Gaps = 10/211 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+VLIGDSAVGKS LL+RFARNEF +SKATIGVEFQT+ + ID K VKAQIWDTA
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R +FD RWLDEL H D V ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R V E+ + A+ E LFFMETSAL++TNV TAF V+ EIY +S+K L + D +
Sbjct: 131 ENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNS-DSYK 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
+ N V D ++SK+G CC
Sbjct: 190 AELSENR-------VSLADGGASSKKGFSCC 213
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 163/215 (75%), Gaps = 9/215 (4%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +F+ + WL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIMLIGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQREN-LFFMETSALEATNVETAFLTVLTEIYR-IISKKSLT 186
K DL RAV TEDAQ F R+ L F+ETSAL+ATNVE AF T+L + IISKKSL+
Sbjct: 124 KTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISKKSLS 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ DE + +K I+V G + N +K+ CC
Sbjct: 184 S-DEPAPSVIKEAVK--HIVVGGSEAN--TKKPCC 213
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK+V+IGDSAVGKS LL+RFARNEF +SKATIGVEFQT+ + ID K +KAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QER+RAVTSAYYRGAVGA++VYD+T+R SFD + RWLDEL H D I ML+GNKCDL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
S+R V ++ + A+ E+LFFMETSAL++TNVE AF V+ EIY +S+K L ++
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILNSD 188
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 154/206 (74%), Gaps = 22/206 (10%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
D +KIDYVFKVV+IGDSAVGK+Q+L+RF++NE T++I+ K +KA
Sbjct: 18 DMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIKA 61
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQSFDH+A+W++ELR HAD +IVIML+
Sbjct: 62 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLV 121
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LR VPTEDA EFA+ + LFF ETSAL NVE AF+ +L EI ++SKK+L
Sbjct: 122 GNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKALE 181
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQD 211
+ +A LKG++I ++ G +
Sbjct: 182 CGNVKGIA-----LKGSKIDVISGAE 202
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 146/176 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V E+ + A+ E LFFMETSAL++TNV+ AF V+ EIY +S+K L ++
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSD 185
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 156/216 (72%), Gaps = 5/216 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY+ +Y++K+VLIGDS VGKS LL+RF R+EF+++S++TIGVEF T+TL ID + VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKA 66
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K +S++ ++RWL EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELV 126
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+A+ FA +L F E SAL + NV+ +F +L IY +ISK L
Sbjct: 127 GNKSDLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 187 ANDEHDVAGNSNLLKGTRIIVPG-QDQNSASKRGCC 221
ND+ G T + P Q++ + CC
Sbjct: 187 TNDQ----GAQKPSGPTISLTPAPQEKKGKNNSNCC 218
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 145/176 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+++R +FD++ RWL EL H+D + ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R VP E+ + A+ E LFFMETSAL++TNV TAF V+ EIY +S+K L ++
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNSD 186
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 151/194 (77%), Gaps = 5/194 (2%)
Query: 29 SQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGA 88
S LL+RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 89 VGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQ 148
VGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LRAVPTE+A+ FA
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 149 RENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVP 208
+L F+ETSAL+A+NVE AF +LTEIYRI+S K+L + D + + + GT I +
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----SAQATIGAGTNISLS 183
Query: 209 GQDQNSASKRG-CC 221
+ A+K G CC
Sbjct: 184 KPADDDAAKGGKCC 197
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 166/215 (77%), Gaps = 10/215 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDSAVGKS LL R+ARNEF+ +SKATIGVEFQT+++ I+ K VKAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA+GA++VYD+T++Q+F+++++WLDELR + ++V ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+R V E+ +E A+ ENLFFMETSAL +TNV+TAF V+ EI+ S++ + D++D
Sbjct: 131 TDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVP--DDYD 188
Query: 193 VAGNSNLLKGTRIIVPG-----QDQNSASKR-GCC 221
+ + +G ++ + G Q+ A++R CC
Sbjct: 189 --KDDRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 139/161 (86%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++++D KTVKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K ++ ++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
VPTE+A+ F+ L F+ETSAL+A+NVE+AF T+LT++YR
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 143/169 (84%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LT
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 149/186 (80%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF R+ F ++SK+TIGVEF T+ ++ID K +KAQIWDTA
Sbjct: 25 DYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTA 84
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+ K QSF ++ WL+ELR HA+KNIV+ML+GNKCDL
Sbjct: 85 GQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDL 144
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V TEDA+ FAQ++ L F+ETSAL++TNVE AF +L +IY I+S N +
Sbjct: 145 RHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNNIDMK 204
Query: 193 VAGNSN 198
++ ++N
Sbjct: 205 MSLHNN 210
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 145/176 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF + SKATIGVEFQT+ + ID K VKAQIWDTA
Sbjct: 7 EYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+++R +F+ +ARWLDEL+ H D + ML+GNKCDL
Sbjct: 67 GQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGNKCDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V TE+ + A+ E LFFMETSAL+ATNV+TAF V+ EI+ +S+K L ++
Sbjct: 127 ENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVLHSD 182
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 142/176 (80%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+VLIGDSAVGKS LL+RFARNEF +SKATIGVEFQT+ + ID K +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD + RWL EL D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V TE+ + A+ E LFFMETSAL+ATNV+TAF V+ EIY IS+K L ++
Sbjct: 130 ENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSD 185
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 163/224 (72%), Gaps = 7/224 (3%)
Query: 3 NLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHK 62
++Y + + DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 2 DVYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
Query: 63 TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIV 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + +WL+EL H+D N+V
Sbjct: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVV 121
Query: 123 IMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
+L+GNK DL R V T + + A+ ++LFFMETSAL+++NV AF TV+ EIY I+S+
Sbjct: 122 TILVGNKSDLKDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSR 181
Query: 183 KSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSA-----SKRGCC 221
K ++ +E + + G +++ G A + GCC
Sbjct: 182 KVMS--NEFNKQDAPLMGNGKTVVLQGDGSQEAIAEPRNGGGCC 223
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/157 (71%), Positives = 136/157 (86%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 12 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ RWL ELR H D NIV+MLIGNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVMLIGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAF 169
L AV T+D + FA+RE+L+FMETSALEATNVE AF
Sbjct: 132 RHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 143/169 (84%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
+GNK DL LR+VPT++A+ FA+R L F+ETSAL++TNVETAF +LT
Sbjct: 122 VGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 145/176 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF++ SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA+LVYD+++R +FD++ RWL EL H+D + ML+GNKCDL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R VP E+ + A+ E LFFMETSAL++TNV TAF V+ EIY +S+K L ++
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNSD 186
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 163/215 (75%), Gaps = 7/215 (3%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+IDYVFKVV++GDSAVGK+QLL RF ++EF +DSK+TIGVEFQT+TLS+ K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GAM+VYD+T+R++F+++ARW++ELR HAD + V+ LIGNK
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 131 DL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
D+ R V ++A FA+ + LFF E SAL NV+ AFLT+L EI+ ++S+++L ++
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 190 EHDV----AGNSNL--LKGTRIIVPGQDQNSASKR 218
+ AG + LKGT + V + SA K+
Sbjct: 198 ARRMRDGGAGGGEVLSLKGTTLDVGSIMETSAMKK 232
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY DY+FK+VLIGDS VGKS LL+RF +EF+V+SK+TIGVEF T+T+ ++
Sbjct: 1 MSN--EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVE 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD+N
Sbjct: 59 GKKVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADEN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
+ + LIGNK DL LRAVPT++A+ +AQ + F ETSAL A NV+ AF ++T IY+++
Sbjct: 119 VAVGLIGNKSDLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMV 178
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCC 221
SK + D + +G + +G I + P ++ + CC
Sbjct: 179 SKNQV---DLSEKSGGGTMPRGPTISLTPASNEKTKKSNNCC 217
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 156/216 (72%), Gaps = 3/216 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF T+T+ ++ K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD+N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT++A+ FAQ L F ETSAL + NV+ AF ++T IY+++SK +
Sbjct: 125 GNKSDLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVD 184
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCC 221
N+ + AG + KG I + P + + CC
Sbjct: 185 LNEYGNNAGQA--PKGPTISLTPAPAKKNKKSDNCC 218
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 145/193 (75%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
+ G+ + DY+FK+VL+GDS VGKS LL+RF RNEF ++SK+TIGVEF T+T+ + +K
Sbjct: 1 MSGETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKI 60
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T ++D++ +WL ELR HAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVI 120
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
ML+GNKCDL LR AQ+FA++E L F+ETSAL ATNVE AF+ L +Y ++SK
Sbjct: 121 MLVGNKCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSKL 180
Query: 184 SLTANDEHDVAGN 196
+ A +
Sbjct: 181 KMACTPSQSAAAS 193
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 156/206 (75%), Gaps = 6/206 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF+ SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +F+ +ARWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++RAV E+ + A+ + LFFMETSAL +TNV+TAF V+ +IY S+K L + D H
Sbjct: 130 DNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQLNS-DMHK 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR 218
LK + +D N SK+
Sbjct: 189 TE-----LKWNSRVSLVKDDNKGSKQ 209
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 156/224 (69%), Gaps = 7/224 (3%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY+ +Y+FK+VL+G+S+VGKS LL+RF R+EF+++SK TIGVEF T+T+ +D
Sbjct: 1 MSNSAEDYSYDYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVD 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRAVT+AYYRGAVGA+LVYD++ S++ +RWL EL+ HAD N
Sbjct: 61 GKRIKAQIWDTAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADAN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+ L+GNK DL LRAVPT++A+ FA + L F E SAL + NVE AF ++ IY ++
Sbjct: 121 IVVELVGNKSDLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMV 180
Query: 181 SKKSLTANDEHDVAGNSN--LLKGTRI-IVPGQDQNSASKRGCC 221
SK ND GN N + G I + P + K CC
Sbjct: 181 SKHQFDMND----YGNDNKPITGGQTITLTPTPKDSKIKKDSCC 220
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 161/211 (76%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF+++SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 8 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD +ARWLDEL+ H++ + ML+GNK DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R V E+ + A+ E LFF+ETSAL++TNV+ AF V+ EIY IS+K L + D +
Sbjct: 128 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNS-DSYK 186
Query: 193 VAGNSNLLKGTRIIVPGQD--QNSASKRGCC 221
+ N + ++ G D + + S+ CC
Sbjct: 187 AELSVNRVS---LVSNGADGAKQANSRYSCC 214
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 154/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ + N+ L + PGQ+ KR CC+S
Sbjct: 182 ---QNSIRTNAITLGSAQ---PGQEPGPGEKRACCIS 212
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 148/184 (80%), Gaps = 4/184 (2%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTV 64
GDY DY+FK+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + ++K +
Sbjct: 1 GDY---YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKII 57
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK+ SF+++ +WL ELR +AD NIVI+
Sbjct: 58 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVIL 117
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L+GNK DL LR + DA ++A++E L F+ETSALEATNVE AF +L EIY + KK
Sbjct: 118 LVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQ 177
Query: 185 LTAN 188
T N
Sbjct: 178 ATKN 181
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 156/217 (71%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPT++A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ N+ L T+ PGQD +S K+ CC+S
Sbjct: 182 ---QNSTRTNTITLGDTQ---PGQDPSSGEKKACCIS 212
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 139/166 (83%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS +L+RF R EF+++S++TIGVEF TK++ I K VKAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++KR SF++ ARWL ELR HAD +IV+ML+GNKCDL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
LRAV ++A++F +L F+ETSALEATNVE AF +L +IY+
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYK 178
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 158/213 (74%), Gaps = 9/213 (4%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ ++VFKVVLIG+S VGKS LL+RF +NEFS DS+ TIGVEF T+T+ ++ T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAG ERYRA+TSAYYRGAVGA+LVYD++K +++ RWL EL HAD +IV+ML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL ++R+VPTEDA++FA++ L F ETSALE+ NVE AF TVLTEI++ ++ K +T
Sbjct: 124 KSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEVT-- 181
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G+ + + ++ P + Q K+ CC
Sbjct: 182 -----RGSISAVTLSQPKTPAETQE--EKKTCC 207
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 157/209 (75%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK V++GDS VGK+ +L+RF RNEFS+DSK+TIGV+F TK +++D+K VKAQ+WDTA
Sbjct: 8 DYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQ+RYRA+T+AYYRGAVGA+LVYD+T+R ++D++ RWL ELR AD N VIML+GNK DL
Sbjct: 68 GQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+RAV TE+A F+ L F+ETSAL+++NV+ AF TV+ +I++I+S + L E++
Sbjct: 128 KHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQL-ERSENE 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V+ G I + + +K GCC
Sbjct: 187 VSAPG---AGAPIKIDNSTETQTTKGGCC 212
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 154/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ N+ L G + GQ+ S KR CC+S
Sbjct: 182 ---QNSTRTNAITLGGAQ---GGQEPGSGEKRACCIS 212
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 163/219 (74%), Gaps = 7/219 (3%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+IDYVFKVV++GDSAVGK+QLL RF ++EF +DSK+TIGVEFQT+TLS+ K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GAM+VYD+T+R++F+++ARW++ELR HAD + V+ LIGNK
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 131 DL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
D+ R V ++A FA+ + LFF E SAL NV+ AFLT+L EI+ ++S+++L ++
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 190 EHDV----AGNSNL--LKGTRIIVPGQDQNSASKRGCCL 222
+ AG + LKGT + + SA K+ +
Sbjct: 198 ARRMRDGGAGGVQVLSLKGTTLNFGSIMETSAMKKSLAV 236
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/228 (53%), Positives = 164/228 (71%), Gaps = 15/228 (6%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+IDYVFKVV++GDSAVGK+QLLARF R+EF++DSK+TIGVEFQT+TL++ K VKAQIWD
Sbjct: 29 EIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQIWD 88
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD-KNIVIMLIGNK 129
TAGQERYRAVTSAYYRGA+GAM+VYD+T+R +F+H+ARW++ELR HAD + V+ LIGNK
Sbjct: 89 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIGNK 148
Query: 130 CDL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
D+ R V ++A A+ + LFF E SAL NVE AFLT+L E++ ++S+++L +
Sbjct: 149 ADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRALELD 208
Query: 189 DEHDVAGNSNL-----------LKGTRIIVPGQDQNSASKRG--CCLS 223
+ + G+ LKGT + V + SA KR C S
Sbjct: 209 EARRMRGDQGQGDGGRGGEVLSLKGTAVDVGSIMETSAMKRSSQCACS 256
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + ++K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+TK+ SF+++ +WL ELR +AD NIVI+L+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
L LR + +A +FA++E L F+ETSALEATNVE AF +L EIY + KK T N++
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNED 187
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 161/211 (76%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FKVV+IGDSAVGKS LL+R+ARNEF+++SKATIGVEFQT+++ ID K VKAQIWDTA
Sbjct: 95 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 154
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+++R +FD +ARWLDEL+ H++ + ML+GNK DL
Sbjct: 155 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 214
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R V E+ + A+ E LFF+ETSAL++TNV+ AF V+ EIY IS+K L + D +
Sbjct: 215 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNS-DSYK 273
Query: 193 VAGNSNLLKGTRIIVPGQD--QNSASKRGCC 221
+ N + ++ G D + + S+ CC
Sbjct: 274 AELSVNRVS---LVSNGADGAKQANSRYSCC 301
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 153/219 (69%), Gaps = 4/219 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY D +FK+VLIGDS VGKS LL+RF +NEF++DSK+TIGVEF T+TL ID K +KA
Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+++ FAQ L F ETSAL + NV+ AF ++ IY+ +SK +
Sbjct: 125 GNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMD 184
Query: 187 ANDEH---DVAGNSNLLKGTRIIVPGQDQN-SASKRGCC 221
D +V G S T + P ++N + S CC
Sbjct: 185 LGDSSTNGNVNGASAPNGPTISLTPTPNENKNGSGNNCC 223
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 156/213 (73%), Gaps = 11/213 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
++VFKVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+++ +D T+KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD+TK +++ + RWL EL HAD +IV+ML+GNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R VPTE+A++FA +L FMETSALE+TNVE+AFL VLT I++ ++ K +T
Sbjct: 128 ATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRGSISA 187
Query: 193 VA-GNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
V G ++ G + RGCC +S
Sbjct: 188 VTLGQTH----------GPSREFQESRGCCKNS 210
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/170 (68%), Positives = 138/170 (81%), Gaps = 5/170 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL+GDS VGKS LL+RF RN FS+DSK+TIGVEF T+T+ +D KT+KAQIWDTA
Sbjct: 18 DYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 77
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD-KNIVIMLIGNKCD 131
GQERYRAVTSAYYRGAVGA+LVYD+TK +F + ARWL ELR HAD + +ML+GNK D
Sbjct: 78 GQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVGNKTD 137
Query: 132 L----GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
L G LRAVP D A+RE L F+ETSAL+ATNV+ AF+T+LTEIY
Sbjct: 138 LAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIY 187
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 160/216 (74%), Gaps = 10/216 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEF+ SKATIGVE +T+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
QER+RAVTSAYYRGAVGA++VYD+++R +F+ + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
S+RAV E+ + A+ E LFFMETSAL++TNV+TAF V+ +IY IS+K L ++
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSD---- 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRG----CCLSS 224
+ L R+ + +D N +S +G CC SS
Sbjct: 186 -TYKTELSMKNRVSLV-KDDNKSSTQGFGFSCCSSS 219
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 156/213 (73%), Gaps = 12/213 (5%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ ++VFKVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+T+ +++ T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAG ERYRA+TSAYYRGAVGA+LVYD+TK +++ + RWL EL HAD +IV+MLIGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL S R+VPTE+A++FA+++ L F+ETSAL++TNVE AF TVL EI++ +S K +
Sbjct: 124 KSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVRG 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V NS + T K+ CC
Sbjct: 184 PMSAVTLNSPKAEDTE------------KKPCC 204
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 155/221 (70%), Gaps = 3/221 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY DY+FK+VLIGDS VGKS LL+RF NEF++DSK+TIGVEF T+T+ +D
Sbjct: 1 MSN--EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVD 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N
Sbjct: 59 GKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
+ + LIGNK DL LRAVPTE+A++FA L F ETSAL + NV+ AF ++T I++ +
Sbjct: 119 VAVGLIGNKSDLAHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKV 178
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SK + ++ + N + P + + S+S CC
Sbjct: 179 SKHQVELSNANKPGAGPNGPTISLTPAPNEKKKSSSNN-CC 218
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 155/213 (72%), Gaps = 11/213 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
++VFKVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+++ +D T+KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD+TK +++ + RWL EL HAD +IV+ML+GNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++R VPTE+A++FA L FMETSALE+TNVE+AFL VLT I++ ++ K +T
Sbjct: 128 ATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRGSISA 187
Query: 193 VA-GNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
V G ++ G + RGCC +S
Sbjct: 188 VTLGQTH----------GPSREFQESRGCCKNS 210
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + ++K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+TK+ SF+++ +WL ELR +AD NIVI+L+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
L LR + +A +FA++E L F+ETSALEATNVE AF +L EIY + KK T N++
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNED 187
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 158/226 (69%), Gaps = 13/226 (5%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+Q DY+FK+VLIGDS VGKS LL+RF ++EF+ D K TIGVEF T+++ D+K +KAQI
Sbjct: 5 DQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKAQI 64
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERY A+TSAYYRGAVGA+L+YD+TK SF ++ +WLDE+R HA+ +IV+ML+GN
Sbjct: 65 WDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLVGN 124
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA- 187
K DL LR V EDA FA++ N+ F+ETSAL+A+NVE F ++TEIY++++K+S+
Sbjct: 125 KSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSMVPE 184
Query: 188 NDEHDVAGNS-NLLKGTRIIV-----------PGQDQNSASKRGCC 221
N+E V+ LK ++ P N S CC
Sbjct: 185 NNESQVSNKKGESLKSNKLQTKMNQSRGVSNQPNNKDNQQSNDQCC 230
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 154/220 (70%), Gaps = 6/220 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY D +FK+VLIGDS VGKS LL+RF +NEF++DSK+TIGVEF T+TL ID K +KA
Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+++ FAQ L F ETSAL + NV+ AF ++ IY+ +SK +
Sbjct: 125 GNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMD 184
Query: 187 ANDEHDVAGNSN---LLKGTRI-IVPGQDQN-SASKRGCC 221
D GN+N G I + P ++N A+ CC
Sbjct: 185 LGDSS-ANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 153/213 (71%), Gaps = 8/213 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ ++VFKVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+T+ + +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAG ERYRA+TSAYYRGAVGA+LVYD+TK +++ + RWL EL HAD +IV+ML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DLGS R+VP E+A++FA++ L F+ETSALE+TNVETAF VL EI+R +S K +
Sbjct: 124 KTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKVLRG 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V+ S VP + K+ CC
Sbjct: 184 SISAVSLASP--------VPRAAGDPEEKKPCC 208
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + ++K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+TK+ SF+++ +WL ELR +AD NIVI+L+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
L LR + +A +FA++E L F+ETSALEATNVE AF +L EIY + KK T N++
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNED 187
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 147/177 (83%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N+ ++VFKVVLIG+S VGKS LL+RFA+NEF+ DS+ TIGVEF T+T+ ++ T+KAQI
Sbjct: 8 NEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKAQI 67
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAG ERYRA+TSAYYRGAVGA+LVYD+TK +++ + RWL EL HAD ++V+ML+GN
Sbjct: 68 WDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLVGN 127
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
K DL S R+VPTE+A++FA+++ L F+ETSALE+TNVE AF VL+EI+R +S K +
Sbjct: 128 KSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKV 184
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 155/217 (71%), Gaps = 5/217 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF N+F+++SK+TIGVEF T+T+ ++ K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT++A+ FAQ L F ETSAL++ NV+ AF ++T IY+++SK +
Sbjct: 125 GNKSDLDHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQV- 183
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQDQN-SASKRGCC 221
D D N KG I + P ++N S CC
Sbjct: 184 --DLGDANTQGNAPKGPTISLTPAPNENKKKSANNCC 218
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 156/217 (71%), Gaps = 5/217 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF +EF+V+SK+TIGVEF T+T+ ++ K VKA
Sbjct: 6 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKA 65
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD+N+ + LI
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLI 125
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT++A+ +AQ + F ETSAL A NV+ AF ++T IY+++SK +
Sbjct: 126 GNKSDLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQV- 184
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQDQNSASK-RGCC 221
D + G+ + +G I + P + S K CC
Sbjct: 185 --DLSENNGSGTVPRGPTISLAPAPSEKSKKKTNNCC 219
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/183 (64%), Positives = 144/183 (78%), Gaps = 10/183 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL+GDS VGKS LL+RF RN FS+DSK+TIGVEF T+T+ +D KT+KAQIWDTA
Sbjct: 17 DYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 76
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD-KNIVIMLIGNKCD 131
GQERYRA+TSAYYRGA GA+LVYD+T+ +F+ ARWL ELR HAD + +ML+GNK D
Sbjct: 77 GQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTD 136
Query: 132 L---GS------LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
L GS RAVP DA A+RE L F+ETSAL+ATNV+ AF T+LTEIYR +S+
Sbjct: 137 LARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSR 196
Query: 183 KSL 185
K+L
Sbjct: 197 KAL 199
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 154/217 (70%), Gaps = 4/217 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY D++FK+VLIGDS VGKS LL+RF NEF++DSK TIGVEF T+T+ ++ K +KA
Sbjct: 5 DYGYDYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+T+AYYR AVGA++VYD+TK S+++ WL EL+ +AD+N+ + LI
Sbjct: 65 QIWDTAGQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL RAVPT++A+ +AQ L F ETSAL A NV+ AF ++T IY++ISK L
Sbjct: 125 GNKSDLDHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLD 184
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQDQ-NSASKRGCC 221
ND N+N KG I + P ++ + S CC
Sbjct: 185 LNDAS--GNNANAPKGPTISLTPAPNEKHKKSTNNCC 219
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 154/211 (72%), Gaps = 8/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKV LIGDS VGKS L RF RNEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK--SLTANDE 190
L AV TED A+RE+L FMETSALEATNV+ AF VL++ +++++ L D+
Sbjct: 131 RHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLARRLWKLVIIDQ 190
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V S + ++ D ++ K GCC
Sbjct: 191 DAVPSKSEKIDVSK------DVSAVKKVGCC 215
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 153/220 (69%), Gaps = 6/220 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY D +FK+VLIGDS VGKS LL+RF +NEF++DSK+TIGVEF T+TL ID K +KA
Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+++ FAQ L F ETSAL + NV+ AF ++ IY+ +SK +
Sbjct: 125 GNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMD 184
Query: 187 ANDEHDVAGNSN---LLKGTRI-IVPGQDQN-SASKRGCC 221
D GN+N G I + P ++N A+ CC
Sbjct: 185 LGDSS-ANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 153/210 (72%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FK+VLIGDS VGK+ LL+RF +NEF++DSK TIGVEF TKT+ ++K +KAQIWDTA
Sbjct: 10 DFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQE+YRA+T+AYYRGAVGA+ +YD+TK+Q+FD++ +WL ELR +AD NI+ MLIGNKCDL
Sbjct: 70 GQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLIGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+R V TEDA +FA+ NL FMETSA +A NV+ AF ++TEIY + + N+E
Sbjct: 130 QEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTRP---NEEKK 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASK-RGCC 221
A G II + A K + CC
Sbjct: 187 KAQPQQ--NGNNIIKDFKQPTQAEKEKKCC 214
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 152/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPT++A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ + + S PGQ+ KR CC+S
Sbjct: 184 SSRTNAITLGS--------AQPGQEPGPGEKRACCIS 212
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 158/220 (71%), Gaps = 9/220 (4%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF +EF ++SK+TIGVEF T+T+ +D K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K+ S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT++A++FAQ L F ETSAL + NV+ AF ++T IY++ISK +
Sbjct: 125 GNKSDLSHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQV- 183
Query: 187 ANDEHDVAGNSNLL---KGTRI-IVPGQDQ-NSASKRGCC 221
+ V N+N L KG I + P ++ +S CC
Sbjct: 184 ---DLGVDNNNNTLNAPKGPTISLTPAPNEKKKSSSNNCC 220
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY+ +Y++K+VLIGD VGKS LL+RF R+EF+++S++TIGVEF T+TL ID + VKA
Sbjct: 7 DYSYDYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKA 66
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD+ K +S++ ++RWL EL+ HAD NIVI L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELV 126
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+A+ FA +L F E SAL + NV+ +F +L IY +ISK L
Sbjct: 127 GNKSDLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
Query: 187 ANDEHDVAGNSNLLKGTRIIVPG-QDQNSASKRGCC 221
ND+ G T + P Q++ + CC
Sbjct: 187 TNDQ----GAQKPSGPTISLTPAPQEKKGKNNSNCC 218
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 149/203 (73%), Gaps = 3/203 (1%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VL S + KS LL+RF RNEFS++SK+TIGVEF T+++ + K +KAQIWDTAGQERYR
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD+TK+ SFD++ RWL EL+ HAD NIVIML+GNK DL L+AV
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAV 141
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSN 198
T+DA FA+ L F+ETSAL+ +NVE AF ++L+EIYR+ SKK+L + A N+
Sbjct: 142 TTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSNFAPNAT 201
Query: 199 LLKGTRIIVPGQDQNSASKRGCC 221
T +I P D+ K CC
Sbjct: 202 ---QTIVINPPADEGKTEKAKCC 221
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 156/218 (71%), Gaps = 5/218 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF T+T+ ++ K +KA
Sbjct: 6 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKA 65
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K ++++ WL EL+ +AD N+ I LI
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLI 125
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+A+ FA LFF ETSAL + NV+ AF ++ +IY++++K +
Sbjct: 126 GNKSDLEHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVD 185
Query: 187 ANDEHDVAGNSNLLKGTRI---IVPGQDQNSASKRGCC 221
+ + G+S KG I VPG+ + + CC
Sbjct: 186 LGE--NAKGSSGAPKGPTISLAPVPGEKKKKSKSNSCC 221
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ N+ L G + GQ+ KR CC+S
Sbjct: 182 ---QNSTRTNAITLGGAQ---AGQEPGPGEKRACCIS 212
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
++FKVVLIG S G+S LL+RF RNEF++DSK+T G++F T+++ +D KT+KAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QER RA TSAYYR A+GA+LV+D+ K +++++ RWL E R HAD NIVIML+ NK DL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
LRAVPT++A+ FA++ L F+E+SAL TNVE AF T+LTEIYR +S+K ++ E+D+
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQISDRRENDM 180
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +SN++ I VP + S K CC
Sbjct: 181 SPSSNMVP---IHVPPTTE-SKPKMQCC 204
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 154/204 (75%), Gaps = 7/204 (3%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
+VLIGDS VGKS LL R+ +NEF+++SK+TIGVEF T+++ D+KT+KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD++K +++++ +WL ELR HAD +IVIML+GNK DL LR
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR-IISKKSLTANDEHDVAGN 196
VPTE+A+ FAQR NL F+ETSAL +TNVETAF T+L EIY+ ++ A D+ D N
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVRTLGGGAADDKD---N 177
Query: 197 SNLLKGTRIIVPGQDQNSASKRGC 220
N+ G + V D K+ C
Sbjct: 178 KNVETGVVVTV---DTGGEKKKDC 198
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 155/217 (71%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPT++A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+++ N+ L + PGQ+ S K+ CC+S
Sbjct: 182 ---QNNARANAITLGSAQ---PGQELGSEEKKACCIS 212
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 154/220 (70%), Gaps = 6/220 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY D +FK+VLIGDS VGKS LL+RF +NEF++DSK+TIGVEF T+TL I+ K +KA
Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+++ FAQ L F ETSAL + NV+ AF ++ IY+ +SK +
Sbjct: 125 GNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMD 184
Query: 187 ANDEHDVAGNSN---LLKGTRI-IVPGQDQN-SASKRGCC 221
D GN+N G I + P ++N A+ CC
Sbjct: 185 LGDS-SANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 143/174 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
++VFKVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+++ +D T+KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD+TK +++ + RWL EL HAD +IV+ML+GNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
++R VPTE+A++FA L FMETSALE+TNVE+AFL VLT I++ ++ K +T
Sbjct: 128 ATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVT 181
>gi|224105831|ref|XP_002333760.1| predicted protein [Populus trichocarpa]
gi|222838434|gb|EEE76799.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/152 (75%), Positives = 133/152 (87%), Gaps = 2/152 (1%)
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
Q RYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+A+WL+ELR HAD NIVIMLIGNK DLG
Sbjct: 1 QFRYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGNKSDLG 60
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
+LRAVPTEDA+EFAQ+ENLFFMETSALEATNVE+AFL+VLTEIYR+ISKK+L AN E +
Sbjct: 61 TLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIAN-EQES 119
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKR-GCCLSS 224
G+S+LLKGT I+VP Q+ S + CC +S
Sbjct: 120 GGSSSLLKGTNIVVPEQEPVSGGRSFSCCGTS 151
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 140/175 (80%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK+VLIGDSAVGKS LL+RFARNEF +SKATIGVEFQT+ + ID K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QER+RAVTSAYYRGA GA++VYD+++R +F+ + RWLDEL D + ML+GNKCDL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
++R V E+ + A+ E LFFMETSAL++TNV+TAF V+ EIY IS+K L ++
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSD 186
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 155/217 (71%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPT++A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+++ N+ L + PGQ+ S ++ CC+S
Sbjct: 182 ---QNNSRANAVTLSNAQ---PGQELGSVERKACCIS 212
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 150/218 (68%), Gaps = 14/218 (6%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQN 183
Query: 187 ANDEHDVA-GNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + GN+ GQD KR CC+S
Sbjct: 184 STRTSAITLGNAQ---------AGQDPGPGEKRACCIS 212
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 157/218 (72%), Gaps = 8/218 (3%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY +Y+FK+VLIGDS VGKS LL+RF RNEF+++S++TIGVEF T+T+ ID K VKA
Sbjct: 6 DYTYDYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKA 65
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA+LVYD++K +S++++++WL EL+ +AD+NIVI L+
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELV 125
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT++A++F+ L F E SAL A NV+ +F +L I+ ++SK
Sbjct: 126 GNKSDLDHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFD 185
Query: 187 AND---EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D G + L T PG +Q S +K CC
Sbjct: 186 MTDYSGPKPSGGPTISLTPT----PGNEQ-SKNKSNCC 218
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 12 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 67
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 68 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 127
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 128 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 185
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ + N+ L + GQ+ KR CC+S
Sbjct: 186 ---QNSIRTNAITLGSAQ---AGQEPGPGEKRACCIS 216
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ + N+ L + GQ+ KR CC+S
Sbjct: 182 ---QNSIRTNAITLGSAQ---AGQEPGPGEKRACCIS 212
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 152/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + +A S GQ+ + KR CC+S
Sbjct: 184 STRTNAIALGS--------AQAGQEPGAGQKRACCIS 212
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 146/175 (83%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY++K+VLIGDS VGKS LL+RF RNEFS+++K+TIGVEF T+T+ + KT+KAQ+W
Sbjct: 7 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+ K+ ++ + RWL ELR +AD+NI IML+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
DL LR V T++A+EF+++ L F+ETSAL+++NVE AF +LT+IY ++S+ S
Sbjct: 127 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRPS 181
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 156/216 (72%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA + +T ++A + F TEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+D + +N++ + + P D SK CC
Sbjct: 182 AERSANDESPGNNVVDIS--VPPTTDGQRGSKLQCC 215
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/182 (59%), Positives = 145/182 (79%), Gaps = 2/182 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF T+T+ ++
Sbjct: 1 MSN--EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVE 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELRG+AD N
Sbjct: 59 GKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADAN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
+ + LIGNK DL +RAVPT++A+ FAQ L F ETSAL+++NV+ AF ++T IY+++
Sbjct: 119 VAVGLIGNKSDLDHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMV 178
Query: 181 SK 182
SK
Sbjct: 179 SK 180
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 154/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ--- 180
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + +S + G+ GQ+ S KR CC+S
Sbjct: 181 ---RQNSSRSSAITLGS--AQAGQEPGSGEKRTCCIS 212
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 155/209 (74%), Gaps = 4/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+ K+VLIGDS VGK+ LLARF R++F+ +SK+TIGVEF +KT+ I+ KT+KAQIWDTA
Sbjct: 7 DYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA+GA+L+YD+T +F+ + +WL ELR +AD+ I++ML+GNKCDL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKCDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
RAV + +A EFA+ +NL F+ETSA EATNV AF T++ EI ++K+++ A ++ +
Sbjct: 127 SEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAAEEKAN 186
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V +G I + K+GCC
Sbjct: 187 VQETPR--QGVSITATKSPEE--KKKGCC 211
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 157/211 (74%), Gaps = 8/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
++VFKVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+T+ ID+ T+KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD++K +++ RWL EL HAD +IV+ML+GNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+LR VPT++A++FA+++ L FMETSAL++TNVE AF VLT I+ ++ + +T
Sbjct: 128 ENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVT------ 181
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
G+ + + + I P + ++GCC S
Sbjct: 182 -RGSISAVTLSSPIGPSSEAQE-ERKGCCRS 210
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 152/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK++
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQNQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + +A S GQ+ KR CC++
Sbjct: 184 SPRSNAIALGS--------AQAGQEPGPGQKRACCIN 212
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 150/218 (68%), Gaps = 14/218 (6%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQN 183
Query: 187 ANDEHDVA-GNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + GN+ GQD KR CC+S
Sbjct: 184 STRTSAITLGNAQ---------AGQDPGLGEKRACCIS 212
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 154/217 (70%), Gaps = 4/217 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF T+T+ ++ K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K ++++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT +A+ FA L F ETSAL + NV+ AF ++T IY+++SK +
Sbjct: 125 GNKSDLAHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVD 184
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQDQN-SASKRGCC 221
D + A + KG I + P ++N +S CC
Sbjct: 185 LGDSGNNAAAA--PKGPTISLTPTPNENKKSSSSNCC 219
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 151/217 (69%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ + + S GQ+ KR CC+S
Sbjct: 184 SSRTNAITLGS--------AQAGQEPGPGEKRACCIS 212
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 151/218 (69%), Gaps = 14/218 (6%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQRQN 183
Query: 187 ANDEHDVA-GNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + + GN+ GQD KR CC++
Sbjct: 184 STRANAITLGNAE---------AGQDSGPGEKRACCIN 212
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 150/217 (69%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + + S GQ+ KR CC+S
Sbjct: 184 STRTNAITLGS--------AQAGQEPGPGEKRACCIS 212
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 154/217 (70%), Gaps = 4/217 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF T+T+ ++ K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K ++++ WL EL+ +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPT++A+ FA L F ETSAL + NV+ AF ++T IY+++SK +
Sbjct: 125 GNKSDLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVD 184
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQDQN-SASKRGCC 221
D + + KG I + P ++N +S CC
Sbjct: 185 LGDSNTSGATA--PKGPTISLTPAPNENKKSSSNNCC 219
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 139/174 (79%), Gaps = 1/174 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VL+GDS VGKS LL RF RNEF +DSK+TIGVEF TKT+ + D K VKAQIWDT
Sbjct: 10 DYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVKAQIWDT 69
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERY+A+T+AYYRGA GA+LVYD+T+R S +++ RWL ELR H D +V+ML+GNKCD
Sbjct: 70 AGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVMLVGNKCD 129
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
L LR V E ++ A+ E L F+ETSAL++TNVE AF ++ EIYR++ KK+L
Sbjct: 130 LRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKAL 183
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 150/217 (69%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK ++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + + S GQ+ S KR CC+S
Sbjct: 184 STRTNAITLGS--------AQGGQEPGSGEKRACCIS 212
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 159/220 (72%), Gaps = 19/220 (8%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DYVFKVV+IGDS VGKSQLL FARN +++SK+TIGVEF T+++ + K VKAQIW
Sbjct: 6 KEYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFM------ETSALEATNVETAFLTVLTEIYRIISKK 183
DL LRAV TEDA+ FA+ E+ FFM ETSAL + AF VLT+IYRI S+K
Sbjct: 125 ADLRHLRAVATEDAKAFAEMESTFFMGNIRYGETSAL-----KEAFKNVLTDIYRIASQK 179
Query: 184 SLTANDEHDVAGNSNLLKGTRIIVPG--QDQNSASKRGCC 221
+L+AN A ++L +++ Q+ SKR CC
Sbjct: 180 NLSAN-----AAQTHLQGQGKVVQNDDVQEPQGKSKRSCC 214
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 151/217 (69%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + ++ S GQ+ KR CC+S
Sbjct: 184 SARTNAISLGS--------AQAGQEAGPGEKRACCIS 212
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 151/196 (77%), Gaps = 3/196 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DYVFK+V++GDSAVGK+QLL RF R+EF +DSK+TIG+EFQT+T+ I VKAQIWDTA
Sbjct: 4 DYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRAVTSAYYRGA+GAMLVYD+T R++FDH RW+ ELR HADK+IV+ML+GNK DL
Sbjct: 64 GQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKADL 123
Query: 133 ---GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
RAV ++A FA+ + LFF E SAL NVE AFLT+L EI+ I+S+K+L A
Sbjct: 124 ARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDAAA 183
Query: 190 EHDVAGNSNLLKGTRI 205
E + LKGT++
Sbjct: 184 ETGGTTDVLALKGTKL 199
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 151/217 (69%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + +A S GQ+ KR CC++
Sbjct: 184 SPRSNAIALGS--------AQAGQEPGPGQKRACCIN 212
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+++ N+ +L GQ+ KR CC+S
Sbjct: 182 ---QNNARTNAVILGSGP---AGQELGPGEKRACCIS 212
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 156/222 (70%), Gaps = 12/222 (5%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G ++ ++VFKVVLIG+S VGK+ LL+RF RNEF+ DS+ TIGVEF T+TL+ID VK
Sbjct: 2 GSEEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
+QIWDTAG ERYRA+TSAYYRGAVGA+LVYD+TK QS++ + RWL EL HAD +IV+ML
Sbjct: 62 SQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVML 121
Query: 126 IGNKCDL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY-RIISKK 183
+GNKCDL + VP+E+A+ +A+R L F+ETSAL+ATNVE AF ++L +IY R++ K
Sbjct: 122 VGNKCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLKSK 181
Query: 184 SLTANDEHDVAGNSNLLKGTRIIVPGQDQN--SASKRGCCLS 223
T NL K P Q + KR CC S
Sbjct: 182 GETQQ-----PSTINLSKEAS---PTQSITLVTEQKRSCCQS 215
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 154/216 (71%), Gaps = 11/216 (5%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ ++ +FK+VLIGDS VGK+ L +RF EF+++SK+TIGV+F TK + ID K VKAQI
Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQI 64
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD++K +F ++ RWLDELR +A ++VIML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGN 124
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL LR V TEDA+ FA+++ + FMETSAL A NVE AF L IY ++SK+
Sbjct: 125 KCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRPSFNA 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQN---SASKRGCC 221
DE ++ +NL P ++ N + K+ CC
Sbjct: 185 DEGNIIPTNNL--------PVEEPNLKETTKKKFCC 212
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY D +FK+VLIGDS VGKS LL+RF +NEF++DSK+TIGVEF T+TL ID K +KA
Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+++ FAQ L F ETSAL + NV+ AF ++ IY+ +SK +
Sbjct: 125 GNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMD 184
Query: 187 ANDEHDVAGNSN 198
D GN N
Sbjct: 185 LGDSS-TNGNVN 195
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 158/214 (73%), Gaps = 7/214 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY++K+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ K +KAQIWDTA
Sbjct: 9 DYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD++KR SF+++ RWL ELR HAD NIV++L+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGNKSDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV E+A F+++E + ME SAL ++NVE AF +L+EIY + S++ + ++HD
Sbjct: 129 KHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIA--NQHD 186
Query: 193 VAGNSNLL--KGTRIIVPGQDQNSAS---KRGCC 221
+ + + +G R+ D +S K CC
Sbjct: 187 LTKTTLPIGSQGVRVDPVRVDLDSKGLKRKSSCC 220
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/157 (68%), Positives = 135/157 (85%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
VPT++A+ FA++ NL F+ETSAL++TNVE AF +LT
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 149/217 (68%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ V S GQ+ KR CC+S
Sbjct: 184 NARTNAVTLGSG--------PAGQELGPGEKRACCIS 212
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 137/172 (79%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK+VLIGDSAVGKS LL+RFARNEF +SKATIGVE QT+ + ID K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QER+RAVTSAYYRGA GA++VYD+++R +F+ + RWLDEL D + ML+GNKCDL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
++R V E+ + A+ E LFFMETSAL++TNV+TAF V+ EIY IS+K L
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 149/222 (67%), Gaps = 17/222 (7%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF TK L ID+ TVKAQIWDT+
Sbjct: 6 DYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQIWDTS 65
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T AYYRGAVGA+LVYD+T++ SF ++ WL ELR HAD NIVIML+GNK DL
Sbjct: 66 GQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGNKVDL 125
Query: 133 G-SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
S R V TED A++E F+ETSAL+ATNV+ AF TV IY + KK+ N
Sbjct: 126 SESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKT---NQSA 182
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKR------------GCC 221
D A N G RI + S R GCC
Sbjct: 183 DAATNQP-TAGERIQLRPPSVRGLSSREEKGQQKKENGGGCC 223
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 147/216 (68%), Gaps = 12/216 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
+ + S GQD KR CC+
Sbjct: 184 STRTSAITLGS--------AQAGQDPGPGEKRACCI 211
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 148/193 (76%), Gaps = 7/193 (3%)
Query: 31 LLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVG 90
LL+RF RNEF+++SK+TIGVEF T+++++D KTVKAQIWDTAGQERYRA+TSAYYRGAVG
Sbjct: 18 LLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAVG 77
Query: 91 AMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRE 150
A+LVYD+ K Q+++++ RWL ELR HAD NIVIML+GNK DL LRAV T++A++FA
Sbjct: 78 ALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATEN 137
Query: 151 NLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHDVAGNSNLLKGTRIIVPG 209
L F+ETSAL+A+NVE+AF +LT+IYRI+S KSL ++ D +G +L + P
Sbjct: 138 GLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGETIL-----VAPT 192
Query: 210 QDQNSA-SKRGCC 221
D A S CC
Sbjct: 193 ADDGGAKSGSKCC 205
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 152/211 (72%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+VLIGDSAVGKS LL+RF+R+EF +SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA++VYD+T+ +F+ + RWL EL H D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+RAV E+ + A+ E LFFMETSAL+ATNV+ AF V+ EI+ +S+K L ++
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSD---- 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR--GCC 221
A + L +V QD + +S R CC
Sbjct: 186 -AYKAELSVNRVSLVNNQDGSESSWRNPSCC 215
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEF+ DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPT++A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ + N+ L + GQ+ KR CC+S
Sbjct: 182 ---QNSIRTNAITLGSAQ---AGQELGPGEKRACCIS 212
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF T+T+ ++
Sbjct: 1 MSN--EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVE 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K ++++ WL ELR +AD N
Sbjct: 59 GKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
+ + LIGNK DL LRAVPT++A+ FAQ L F ETSAL + NV+ AF ++T IY+++
Sbjct: 119 VAVGLIGNKSDLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMV 178
Query: 181 SK 182
SK
Sbjct: 179 SK 180
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 144/177 (81%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ ++VFKVVLIG+S VGKS LL+RF +NEFS DS+ TIGVEF T+T+ ++ T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAG ERYRA+TSAYYRGAVGA+LVYD+TK +++ + RWL EL HAD+++V+ML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
K DL S R+VP+E+A++FA + L F+ETSALE+TNVE AF VL EI+R +S + +
Sbjct: 124 KTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREV 180
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 153/213 (71%), Gaps = 3/213 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY DY+FK+VLIGDS VGKS LL+RF NEF+++SK+TIGVEF T+T+ ++
Sbjct: 1 MSN--EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEME 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K ++++ WL ELR +AD N
Sbjct: 59 GKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
+ + LIGNK DL LRAVPT++A+ FA L F ETSAL + NV+ AF ++T IY+++
Sbjct: 119 VAVGLIGNKSDLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMV 178
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRI-IVPGQDQ 212
SK + D + N+ KG I + P ++
Sbjct: 179 SKHQVDLGDSGNNDINNGTPKGPTISLTPAPNE 211
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 155/216 (71%), Gaps = 12/216 (5%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ ++VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+TL++D VK+QIW
Sbjct: 6 EEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQIW 65
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAG ERYRA+TSAYYRGAVGA+LVYD+TK QS++++ RWL EL HAD +IV+ML+GNK
Sbjct: 66 DTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGNK 125
Query: 130 CDL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY-RIISKKSLTA 187
CDL + VP+E+A+ +A++ L F+ETSAL+ATNVE AF T+L +IY R++ K
Sbjct: 126 CDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLKLKGGIQ 185
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQD--QNSASKRGCC 221
NL K P Q Q + KR CC
Sbjct: 186 Q-----PSTINLSKEAS---PTQSITQVTEQKRSCC 213
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 152/211 (72%), Gaps = 7/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+VLIGDSAVGKS LL+RF+R+EF +SKATIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGA GA++VYD+T+ +F+ + RWL EL H D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+RAV E+ + A+ E LFFMETSAL+ATNV+ AF V+ EI+ +S+K L ++
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSD---- 185
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR--GCC 221
A + L +V QD + +S R CC
Sbjct: 186 -AYKAELSVNRVSLVNNQDGSESSWRNPSCC 215
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 107/157 (68%), Positives = 135/157 (85%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRA
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 176
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
VPT++A+ FA++ NL F+ETSAL++TNVE AF +LT
Sbjct: 177 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 213
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 142/192 (73%), Gaps = 3/192 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY D +FK+VLIGDS VGKS LL+RF +NEF++DSK+TIGVEF T+TL ID K +KA
Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL LRAVPTE+++ FA L F ETSAL + NV+ AF ++ IY+ +SK +
Sbjct: 125 GNKSDLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM- 183
Query: 187 ANDEHDVAGNSN 198
D D A N N
Sbjct: 184 --DLGDSAANGN 193
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y+++ DY+FK VLIGDSAVGKS LL+RF+R+EF +DSK TIGVEF + + + K +KAQ
Sbjct: 5 YDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +FD++ +WL ELR ++V++L+G
Sbjct: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVG 124
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK D+ LR V +D + A+ E L+FMETSALE NVE AF+ ++T I+ I S+KSL A
Sbjct: 125 NKSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEA 184
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
L + ++ D+ SA+K+ CC
Sbjct: 185 KKNETTISTIKALPVGKEVINIDDEVSATKQASYCC 220
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 142/177 (80%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DYVFKVV+IGDSAVGK+QLL RF ++EF +DSK+TIG+EFQT+T+ I K VKAQIWDTA
Sbjct: 5 DYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTA 64
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRAVTSAYYRGA+GAMLVYD+T R+SF H ARWL +LR HAD +IV+MLIGNK DL
Sbjct: 65 GQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNKADL 124
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
RAV ++A FA+ + LFF E SAL NVE AFL +L EI+ I+S++SL D
Sbjct: 125 SHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMD 181
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 144/187 (77%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ KT+KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD++K +++++ +WL ELR H+D++IV+MLIGNKCDL LR V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSN 198
PT++A+EFA RE LFF ETSAL+ATNV+ AF+ VL + ++ K + + N
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKDAGHNVATKFTSTATSNVTTSNGQ 180
Query: 199 LLKGTRI 205
L TR
Sbjct: 181 LGHQTRF 187
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 153/216 (70%), Gaps = 9/216 (4%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ ++V+KVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+T+ +D T+KAQI
Sbjct: 4 DESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAG ERYRA+TSAYYRGAVGA+LVYD++K +++ RWL EL HAD +IV+ML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL +LR VP+E+AQ FA+ + + FMETSAL++TNVE AF VL+ I + ++ + +T
Sbjct: 124 KRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQKKVASQQVTRG 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
V +S + G K GCC SS
Sbjct: 184 SISAVTLSSPI---------GATDTQERKGGCCKSS 210
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 156/208 (75%), Gaps = 6/208 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RN+F +++K+TIGVEF T+++ I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD-KNIVIMLIG 127
WDTAGQERYRA+TSAYYRG +GA++VYD+ K Q+F+++ RWL ELR HAD ++I IML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL LRAVPT++A FA+R + F+ETSAL++TNVE A +LT IY+ +S K
Sbjct: 126 NKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK-YGV 184
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQDQNSA 215
N++ G ++ VP +QNS+
Sbjct: 185 NEKPVYGGLGTVMPS----VPTTEQNSS 208
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 151/216 (69%), Gaps = 12/216 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
+++ N+ L GQ+ KR CC+
Sbjct: 182 ---QNNARTNAITLGSG---PTGQELGPGEKRACCI 211
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 156/212 (73%), Gaps = 9/212 (4%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDTA 72
+ + VVLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + + K +KAQIWDTA
Sbjct: 3 FFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTA 62
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+ +F+++ +WL ELR +AD NIVI+L+GNK DL
Sbjct: 63 GQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDL 122
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR + DA +FA++E L F+ETSALEATNVE AF +L EIY + KK T +++
Sbjct: 123 KHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSED-- 180
Query: 193 VAGNSNL-LKGTRIIV--PGQDQNSASKRGCC 221
N N+ +G +I V + +K CC
Sbjct: 181 ---NVNIQPRGKKINVDNDNDEDEKKTKTKCC 209
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 145/194 (74%), Gaps = 19/194 (9%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN + DY DY+FK+VLIGDS VGKS +L+RF RNEFSV+SK+TIGVEF T+++ I+
Sbjct: 1 MSNEHDDY----DYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIE 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR---------------QSFDH 105
K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK+ ++F
Sbjct: 57 KKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFAD 116
Query: 106 MARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 165
+ +WL ELR HAD IVIML GNKCDL LR+V T+DA+ +A +E+L F+ETSAL + N+
Sbjct: 117 VEKWLAELRDHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNI 176
Query: 166 ETAFLTVLTEIYRI 179
+ AF VL+ I+ +
Sbjct: 177 DAAFQKVLSVIHEV 190
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 153/203 (75%), Gaps = 5/203 (2%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
+VLIGDS VGKS LL R+ +NEF+++SK+TIGVEF TK++ D+KT+KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RAVTSA YRGAVGA+LVYD++K +++++ +WL ELR AD +IVIML+GNK DL LR
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A+ FAQR NL F+ETSA ++TNVE+AF T+L EIY+ + + + + D+ S
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDDS----KS 176
Query: 198 NLLKGTRIIVPGQDQNSASKRGC 220
+ +G I+V D+ K C
Sbjct: 177 SKPEGGEIVV-NVDEGGGDKSKC 198
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 152/218 (69%), Gaps = 3/218 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ +++K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS-- 184
GNK DL LRAVPT++A+ FA + F ETSAL + NV+ AF ++ I++++SK
Sbjct: 125 GNKSDLAHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVD 184
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASK-RGCC 221
L + ++V N T + P ++ K CC
Sbjct: 185 LNGSGSNNVGSNGGPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 164/223 (73%), Gaps = 10/223 (4%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+IDYVFKVV++GD+AVGK+QLLARFAR+EF++DSK TIGVEFQT+TL++ K VK QIWD
Sbjct: 26 EIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWD 85
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGA+GAM+VYD+T+R +F+H+ARW++ELR HAD + V+ LIGNK
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKA 145
Query: 131 DL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN- 188
D+ + R VP ++A A+ + LFF E SAL NVE AFLT+L E++ +S+++L +
Sbjct: 146 DMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALELDE 205
Query: 189 ------DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG--CCLS 223
D+ D G LKGT + V + SA KR C S
Sbjct: 206 ARRMRGDQGDGGGEVLSLKGTAVDVGSIMETSAMKRSSQCACS 248
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 155/220 (70%), Gaps = 8/220 (3%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ +Y+FK+V+IGDSAVGKS LL RF RNEF+ +KATIGV+F TK++ ID+KT+ AQ W
Sbjct: 5 EEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQER+RAVTS YYRGAVGAM+VYD+T + SF ++ RWL+ELR A+++I+IM++GNK
Sbjct: 65 DTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII-SKKSLTAN 188
DL R VPT++AQ FA+ + F+ETSAL +TNV +F +LT+IY ++ SKK + +
Sbjct: 125 SDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVVD 184
Query: 189 DEHD--VAGNSNLLKGTRIIVPGQDQNSAS-----KRGCC 221
D + V L P N+ S K GCC
Sbjct: 185 DTQNWLVPNQGKKLTPLSDPAPQLTANTTSTHQEKKSGCC 224
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 152/217 (70%), Gaps = 13/217 (5%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPT++A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-- 181
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
++ N+ L + GQ+ KR CC+S
Sbjct: 182 ---QNSTRTNAITLSSAQ---AGQEPGPG-KRACCIS 211
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 150/212 (70%), Gaps = 8/212 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
++VFKVVLIG+S VGKS LL+RF +NEF DS+ TIGVEF T+T+ +++ +KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD++K +++ RWL EL HAD +IV+ML+GNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
S R VPTE+AQ FA + L FMETSAL++TNVE+AF VLT I++ ++ + +T
Sbjct: 128 QSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHKKVASREVTRGSISA 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
V L G + + ++GCC S
Sbjct: 188 VT-----LSGP---IGLNSEQQEERKGCCKGS 211
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/156 (67%), Positives = 134/156 (85%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D+KTVKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD NIVIML+GNK DL LRAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
PT++A+ FA+R L F+ETSAL++TNVETAF +L+
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/225 (52%), Positives = 156/225 (69%), Gaps = 17/225 (7%)
Query: 9 NQKIDYVFKVVL--------IGDSAVGKSQLLA----RFARNEFSVDSKATIGVEFQTKT 56
N + D++FK + S + SQ++ RF RNEF++DSK+TIGVEF T++
Sbjct: 3 NDEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATRS 62
Query: 57 LSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGH 116
+ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD TK+Q+F + RWL ELR H
Sbjct: 63 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREH 122
Query: 117 ADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
ADKNIVIML+GNK D +R V T DA EFA L F+ETSAL+ATNVE AF +LTEI
Sbjct: 123 ADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEI 182
Query: 177 YRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
YRI+S K+L + + + + L ++I + Q++ +K+ CC
Sbjct: 183 YRIVSSKAL-----ENGSSSQSPLGDRKVIEISKTQDADAKQKCC 222
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 159/212 (75%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ + + +L+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHCCVLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TED + +A++E+L+FMETSALEATNVE +F VLT+IYRI+SKK++ +
Sbjct: 131 RHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSKKAVEGAEN-- 188
Query: 193 VAGNSNL-LKGTRIIVPGQDQNSASKRGCCLS 223
GN+++ KG +I + D ++ + GCC S
Sbjct: 189 --GNASVPAKGEKIDLK-NDVSALKRVGCCSS 217
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 151/206 (73%), Gaps = 6/206 (2%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIGDS VGKS LL+RF N+F+++SK+TIGVEF T+T+ ++ K +KAQIWDTAGQERY
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LIGNK DL LRA
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRA 147
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPT++A+ FAQ L F ETSAL++ NVE AF ++T IY+++SK + D +GN+
Sbjct: 148 VPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSKHQVDLGD----SGNN 203
Query: 198 NLLKGTRI-IVPGQDQNSASKRG-CC 221
N KG I + P +++ G CC
Sbjct: 204 NAPKGPTISLTPAPNEHKKKSSGNCC 229
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 145/210 (69%), Gaps = 10/210 (4%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
V +VVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKAQIWDTAG
Sbjct: 34 VGRVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 93
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+GNK DL
Sbjct: 94 ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQ 153
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
R VPTE+A FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+ + +
Sbjct: 154 AREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAIT 213
Query: 195 -GNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
GN+ GQD KR CC+S
Sbjct: 214 LGNAQ---------AGQDPGPGEKRACCIS 234
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 153/218 (70%), Gaps = 3/218 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ +++K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS-- 184
GNK DL LRAVPT++A+ FA + F ETSAL + NV+ AF ++ I++++SK
Sbjct: 125 GNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVD 184
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASK-RGCC 221
L+ + +++ N T + P ++ K CC
Sbjct: 185 LSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 153/220 (69%), Gaps = 12/220 (5%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + ++VFKVVLIG+S VGK+ LL+RF RNEF+ DS+ TIGVEF T+TL+ID VK
Sbjct: 2 GSEEEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
+QIWDTAG ERYRA+TSAYYRGAVGA+LVYD+TK QS++ + RWL EL HAD +IV+ML
Sbjct: 62 SQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVML 121
Query: 126 IGNKCDL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY-RIISKK 183
+GNK DL + VP+E+A+ +A+R L F+ETSAL+ATNVE AF T+L +IY R++ K
Sbjct: 122 VGNKSDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSK 181
Query: 184 SLTANDEHDVAGNSNLLKGTRIIVPGQD--QNSASKRGCC 221
NL K P Q Q + KR CC
Sbjct: 182 GGIQQ-----PSTINLSKEAS---PTQSITQVTEQKRSCC 213
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 137/167 (82%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY++K+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ ++ K +KAQ+WDTA
Sbjct: 10 DYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK+++F + RWL E+R HAD IV+ML+GNKCDL
Sbjct: 70 GQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI 179
LRAV ++DA+++ L F+E SAL+ATNVE AF +T+++ +
Sbjct: 130 KHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHV 176
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 151/215 (70%), Gaps = 15/215 (6%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGK+ LL RF RNEF+++SK+TIGVEF T+++ +D+K +KAQIWDT
Sbjct: 6 DYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIWDTG 65
Query: 73 GQERYRAVTS-----AYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
Y TS +YYRGAVGA+L YD++K +F+ ++RWL ELR HAD NIVIML+G
Sbjct: 66 ---NYFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIMLVG 122
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-T 186
NK DL LRAVPT++A++FA L F+ETSAL+ATNVE +F +LTEI+RI+S K+L T
Sbjct: 123 NKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKALET 182
Query: 187 ANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+N+ G G I+V GCC
Sbjct: 183 SNNAIKPTG------GQTILVSQSPDEPKPSGGCC 211
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 142/189 (75%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ ++VFKVVLIG+S VGKS LL+R+ +NEF+ DS+ TIGVEF T+T+ ++ T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAG ERYRA+TSAYYRGAVGA+LVYD+TK ++D M RWL EL HA+ NIV+ML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL R+VPTE+A+ FA+ L F+E+SALE+TNVE AF VL EI + K L
Sbjct: 124 KTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQG 183
Query: 189 DEHDVAGNS 197
V+ NS
Sbjct: 184 ANRGVSLNS 192
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 138/178 (77%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + ++VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VK
Sbjct: 1 GSHMEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 60
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML
Sbjct: 61 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 120
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 121 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 146/206 (70%), Gaps = 8/206 (3%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIG+S VGK+ LL+RF RNEF DS+ TIGVEF T+T+++ +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LV+D+TK Q++ RWL EL HA+ IV+ML+GNK DL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI +SK+ +++ N+
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQRQSSSRT-----NA 175
Query: 198 NLLKGTRIIVPGQDQNSASKRGCCLS 223
L G + GQ+Q KR CC+S
Sbjct: 176 ITLGGAQ---AGQEQGPGEKRACCIS 198
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 154/213 (72%), Gaps = 11/213 (5%)
Query: 12 IDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDT 71
I +FK+VLIGDS VGK+ L +RF +EF+++SK+TIGV+F TK + ID K VKAQIWDT
Sbjct: 8 IGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQIWDT 67
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD++K +F ++ +WL+EL+ +A +++IMLIGNKCD
Sbjct: 68 AGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGNKCD 127
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
L LR V TEDA +A+++ + FMETSAL++ NVE AF + +IY +ISK +E
Sbjct: 128 LKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISKHPSFNMNET 187
Query: 192 DVAGNSNLLKGTRIIVPGQDQN---SASKRGCC 221
++ +NL P Q+ N SA ++ CC
Sbjct: 188 NIIPTNNL--------PIQEPNIKQSAKRKFCC 212
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 153/218 (70%), Gaps = 3/218 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ +++K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK--S 184
GNK DL LRAVPT++A+ FA + F +TSAL + NV+ AF ++ I++++SK
Sbjct: 125 GNKSDLAHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVD 184
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASK-RGCC 221
L+ + +++ N T + P ++ K CC
Sbjct: 185 LSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 137/177 (77%), Gaps = 4/177 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 21 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 76
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 77 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 136
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 137 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 138/167 (82%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
+ VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D+KTVKAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ERYRA+TSAYYRGAVGA+LVYD+ K ++++ RWL EL+ HAD NI+IML+GNK DL
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIIS 181
LRAVPT++A+ FA++ L F+ETSAL++TNVE AF +L+ I++
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNILSAPNLILT 183
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 137/177 (77%), Gaps = 4/177 (2%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 153/223 (68%), Gaps = 11/223 (4%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M + DYN +VFKVVLIG+S VGK+ LL+RF RNEF+ DS+ TIGVEF T+T+ +
Sbjct: 1 MGSAEEDYN----FVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVG 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
VKAQIWDTAG ERYRA+TSAYYRGAVGA++V+D+TK Q++D + RWL EL HA+ +
Sbjct: 57 DAVVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEAS 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+ML+GNK DL R VP E+A+ FA L F+ETSAL++TNVE AF T+L EI+ +
Sbjct: 117 IVVMLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKV 176
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
K+ ++ + V+ S T P Q A +R CC+
Sbjct: 177 QKQKQRSSQSNTVSLASESPAST---APVQ----AERRPCCVP 212
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 152/218 (69%), Gaps = 3/218 (1%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DY DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ +++K +KA
Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKA 64
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LI
Sbjct: 65 QIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLI 124
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS-- 184
GNK DL LRAVPT++A+ FA + F TSAL + NV+ AF ++ I++++SK
Sbjct: 125 GNKSDLAHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVD 184
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASK-RGCC 221
L+ + +++ N T + P ++ K CC
Sbjct: 185 LSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 151/205 (73%), Gaps = 24/205 (11%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
QKIDYVFKVV+IGDSAVGK+Q+L+RFA+NEF DSK+TIGVEFQT+T++I+ K +KAQIW
Sbjct: 35 QKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIW 94
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ARW++ELR HAD +IVIMLIGNK
Sbjct: 95 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIMLIGNK 154
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL R V T+ + FF+ +I +++SK+SL +N+
Sbjct: 155 GDLVDQRVVHTDKCCGVCRGSGPFFLRD----------------FKINKVVSKRSLESNN 198
Query: 190 EHDVAGNSNL--LKGTRI-IVPGQD 211
G +N+ LKG++I I+ G +
Sbjct: 199 -----GKNNIATLKGSKIDIISGPE 218
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 147/183 (80%), Gaps = 3/183 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY++K+VLIGDS VGKS LL+RF RNEF++++K+TIGVEF T+T+ + KT+KAQIWDTA
Sbjct: 12 DYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN--IVIMLIGNKC 130
GQERYRA+TSAYYRGAVGA+LVYD+ K+ ++ + RWL ELR +AD+N I IML+GNK
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVGNKS 131
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS-LTAND 189
DL LR V T++A+EFA++ L F+ETSAL+++NV+ AF T+LT+I +S+ + + A
Sbjct: 132 DLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPTPIGAPS 191
Query: 190 EHD 192
HD
Sbjct: 192 GHD 194
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 152/221 (68%), Gaps = 12/221 (5%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS DY DY+FKVVL GDS VGKS LL RF +N+F+ DSK TIGVEF T+++SI
Sbjct: 1 MSKAEDDY----DYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISIS 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K +KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T +QSF+ + RW+ E+R +ADK+
Sbjct: 57 GKIIKAQIWDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKD 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIM+IGNK DL LRA+ TE Q+ AQ + FME SA + TNV+ AF ++ +IY+ +
Sbjct: 117 IVIMIIGNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNL 176
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+K+ + + G L+ I G K+GCC
Sbjct: 177 TKQLQKYDQMSHLQGEKLDLE---ITTSGN-----KKQGCC 209
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 152/214 (71%), Gaps = 3/214 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
++ + DY+FK VLIGDSAVGKS LL+RF+R+EF +DSK TIGVEF + + + K +KAQ
Sbjct: 6 FDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F+++ +WL ELR ++VI+L+G
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DLG R V E+ + A+ E L FMETSALE NVE AFL ++T+I+ + S+K+L A
Sbjct: 126 NKSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKNLEA 185
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V L+ G II + ++ + CC
Sbjct: 186 KLNEPV---KPLIIGKEIIHVDHEVSATKQSSCC 216
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 144/206 (69%), Gaps = 8/206 (3%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+GNK DL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+ ++ + + S
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQNSSRTNAITLGS 180
Query: 198 NLLKGTRIIVPGQDQNSASKRGCCLS 223
GQ+ KR CC+S
Sbjct: 181 --------AQAGQEPGPGEKRACCIS 198
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/182 (62%), Positives = 141/182 (77%), Gaps = 4/182 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DYVFKVV+IGDS VGK+QLL RF R +F +DSK+TIG+EFQT+T+ I + VKAQIW
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIW 61
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAMLVYD+T+R SF H ARW+ ELR HADK+IV+ L+GNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNK 121
Query: 130 CDLGSL----RAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
DL + R V ++A+ FA+ + LFF E SAL NVE AFL +L EI+ +S+K L
Sbjct: 122 ADLATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPL 181
Query: 186 TA 187
A
Sbjct: 182 EA 183
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 136/162 (83%), Gaps = 1/162 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ + + K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDT 68
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA+LVYD+TK+ +F+++ +WL ELR +AD NIVI+L+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVL 173
L LR + DA +FA++E L F+ETSALEATNVE AF +L
Sbjct: 129 LKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 160/218 (73%), Gaps = 10/218 (4%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
++++ DY+FK VLIGDS VGKS LL+RFA++EF +DSK TIGVEF + + + K +KAQ
Sbjct: 5 FDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQ 64
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GAMLVYD+++R S++++++WL ELR +++V++L+G
Sbjct: 65 IWDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVG 124
Query: 128 NKCDL-GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
NKCDL G R V E+ + FA+ E L FMETSAL+ NVE FL ++T IY + S+K+L
Sbjct: 125 NKCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLA 184
Query: 187 AN-DEHDVAGNSNLLKGTRIIVPGQDQNSASKRG--CC 221
A DE + NLL G I + D+ +A+K+ CC
Sbjct: 185 AKMDEKPI----NLLNGKEIHIA--DEVTATKQSSTCC 216
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 142/181 (78%), Gaps = 1/181 (0%)
Query: 6 GD-YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
GD Y+++ DY+FK VLIGDSAVGKS LL+RF+R+EF +DSK TIGVEF + + + K +
Sbjct: 2 GDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLI 61
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +FD++ +WL ELR + + +V++
Sbjct: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVV 121
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L GNKCDL R V E+ + A+ E L FMETSALE NVE AFL ++T+I+ I S+KS
Sbjct: 122 LAGNKCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKS 181
Query: 185 L 185
L
Sbjct: 182 L 182
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 152/215 (70%), Gaps = 10/215 (4%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
+ + D+++K+VLIG+S VGKS LL RF RNEF + ++TIGVEF T+++ + K ++AQ
Sbjct: 1 HEEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQ 60
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQERYRA+T+AYYRGAVGA++VYD+TK +F + RWL EL+ +AD IVIM+IG
Sbjct: 61 IWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIG 120
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL R V A+EF Q++NLFF ETSAL+ TNVETAF ++L EI+ K++ +A
Sbjct: 121 NKADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASA 176
Query: 188 NDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCC 221
+E +SN + +VP + +K GCC
Sbjct: 177 VEE-----SSNDKPAEKPDVVPIEPSPKENKGGCC 206
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 10/210 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D+++K+VLIG+S VGKS LL RF RNEF + ++TIGVEF T+++ + K ++AQIWDTA
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA++VYD+TK +F + RWL EL+ +AD IVIM+IGNK DL
Sbjct: 67 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
R V A+EF Q++NLFF ETSAL+ TNVETAF ++L EI+ K++ +A +E
Sbjct: 127 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEE-- 180
Query: 193 VAGNSNLLKGTRI-IVPGQDQNSASKRGCC 221
+SN + +VP + +K GCC
Sbjct: 181 ---SSNDKPAEKPDVVPIEPSPKENKGGCC 207
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 141/182 (77%), Gaps = 2/182 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ ++
Sbjct: 1 MSN--EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVE 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N
Sbjct: 59 NKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
+ + LIGNK DL LRAVPT++A+ FA + F ETSAL + NV+ AF ++ I++++
Sbjct: 119 VAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMV 178
Query: 181 SK 182
SK
Sbjct: 179 SK 180
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 147/195 (75%), Gaps = 8/195 (4%)
Query: 31 LLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQIWDTAGQERYRAVTSAYYRGAV 89
+L+RF R+EF+++SK+TIGVEF TK++ +D K +KAQIWDTAGQERYRA+TSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 90 GAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQR 149
GA+LVYD+TKRQSF+++ RWL ELR HAD NIVI+L+GNK DL LRAV E+A +FA R
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 150 ENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPG 209
E+L F+ETSAL+ATNVE AF +L EIY + KK + N + + +G +I +
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQ----STTQPGRGQKIHLDE 176
Query: 210 QDQNS---ASKRGCC 221
+ +S S+RGCC
Sbjct: 177 ERTDSQIRQSRRGCC 191
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 140/185 (75%), Gaps = 5/185 (2%)
Query: 40 FSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTK 99
S++SK+TIGVEF T+++ +D K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T+
Sbjct: 1 MSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR 60
Query: 100 RQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSA 159
+F+++ RW+ EL+ H D NIVIML+GNK DL LRAV TEDA+ FA++EN FFMETSA
Sbjct: 61 HVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSA 120
Query: 160 LEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG 219
LE+ NVE AF VLT+IY ++SKK+L D D A KG I V G+D SA K+
Sbjct: 121 LESMNVENAFTEVLTQIYHVVSKKALDIGD--DPAAPP---KGQTINVGGKDDVSAVKKS 175
Query: 220 CCLSS 224
C SS
Sbjct: 176 ACCSS 180
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 152/217 (70%), Gaps = 8/217 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL RF RNEF+ +KATIGV+F TK++ ID+K + AQ WDTA
Sbjct: 7 EYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQCWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTS YYRGAVGAM+VYD+T + SF ++ RWL+ELR A+ +I+IM++GNK DL
Sbjct: 67 GQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVGNKSDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII-SKKSLTANDEH 191
R VPT++A+ FA+ + F+ETSAL +TNV AF T+LT+I+ ++ SKK + +D
Sbjct: 127 EMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSKKPVVVDDVQ 186
Query: 192 D--VAGNSNLLKGTRIIVPGQDQNSAS-----KRGCC 221
+ V L P +AS K GCC
Sbjct: 187 NWLVPNQGKKLTPLSDPAPQLTTTTASTHQQKKGGCC 223
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 151/214 (70%), Gaps = 3/214 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
++++ DY+FK VLIGDS VGKS +L+RFA++EF +DSK TIGVEF + + + K +KAQ
Sbjct: 5 FDEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GAMLVYD++ R S++++++WL ELR +++V++L+G
Sbjct: 65 IWDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVG 124
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NKCDL R V E+ + FA+ E L FMETSAL+ NVE FL ++T IY + S+K+L A
Sbjct: 125 NKCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAA 184
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
E NLL G I + + + CC
Sbjct: 185 KMEEQPI---NLLNGKEIHIADEVTATKQTSTCC 215
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 149/209 (71%), Gaps = 8/209 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D+++K+VLIG+S VGKS LL RF RNEF + ++TIGVEF T+++ + K ++AQIWDTA
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA++VYD+TK +F + RWL EL+ +AD IVIM+IGNK DL
Sbjct: 67 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
R V A+EF Q++NLFF ETSAL+ TNVETAF ++L EI+ K++ +A +E
Sbjct: 127 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEE-- 180
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ N + +VP + +K GCC
Sbjct: 181 -SSNDKPTEKPD-VVPIEPSPKENKGGCC 207
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 157/216 (72%), Gaps = 22/216 (10%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA+ AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAE------------------AAFQTILTEIYRIVSQKQM 163
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 164 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 195
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 135/170 (79%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
+VLIGDS VGKS LL R+ + EF+++SK+TIGVEF TKT+ D+K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RAVTSAYYRGAVGA+LVYD++K +++ + +WL ELR AD IVIML+GNK DL LR
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
VPTE+A+ FAQR NL F+ETSA +TNVE AF T+L EIY+ + + + A
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVRNTAPA 170
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 138/183 (75%), Gaps = 4/183 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M + DYN +VFKVVLIG+S VGK+ LL+RF RNEF+ DS+ TIGVEF T+T+ +
Sbjct: 1 MGSAEEDYN----FVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVG 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
VKAQIWDTAG ERYRA+TSAYYRGAVGA++V+D+TK Q++D + RWL EL HA+ N
Sbjct: 57 DAVVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEAN 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IV+ML+GNK DL R VP E+A+ FA L F+ETSAL++TNVE AF T+L EI+ +
Sbjct: 117 IVVMLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKV 176
Query: 181 SKK 183
++
Sbjct: 177 QQQ 179
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 142/206 (68%), Gaps = 8/206 (3%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+GNK DL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+ + V S
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNNARTNAVTLGS 180
Query: 198 NLLKGTRIIVPGQDQNSASKRGCCLS 223
GQ+ KR CC+S
Sbjct: 181 G--------PAGQELGPGEKRACCIS 198
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 149/212 (70%), Gaps = 5/212 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ D+++K+VL+G+S VGKS LL RF RNEF D ++TIGVEF T++++ K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+T+AYYRGA+GA++VYD+TK+ SF+ + +WL EL +ADK +V M+IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
CDL R V T + +E A++ N FF ETSAL+ +NVE AF+T+L +IY SK
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSV----- 179
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + + N+ + T I G N ++ CC
Sbjct: 180 DGEQSSNNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 151/204 (74%), Gaps = 3/204 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y+++ DY+FK VLIGDSAVGKS LL+RF+R+EF +DSK TIGV+F + + + KT+KAQ
Sbjct: 6 YDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+L+YD+T+R +F ++ +WL ELRG + V++L+G
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DLG R V E+ + A+ E L+F+ETSALE NVE AFL+++ I+ ++++K +
Sbjct: 126 NKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLD 185
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQD 211
N + G+ N ++ PG++
Sbjct: 186 N---RLNGDGNNESNGAVVPPGKE 206
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 141/176 (80%), Gaps = 1/176 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVL+GDS VGKS LL+RF RN F +++K+TIGVEF T+++ I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADK-NIVIMLIG 127
WDTAGQERYRA+T AYYRGA+G ++VYD+ K Q+F ++ +WL ELR HAD+ NI IML+G
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
NK DL LRAVPT++A +A R ++ F+ETSAL++TNVE A +LT+IY+ +S K
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTK 181
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 149/216 (68%), Gaps = 7/216 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+V+IGDSAVGKS LL RF RNEF+ +KATIGV+F TK++ I++K + AQ WDTA
Sbjct: 8 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQCWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTS YYRGAVGAM+VYD+T + SF ++ RWL+ELR AD +I+IM++GNK DL
Sbjct: 68 GQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
S R V T++AQ FAQ + F+ETSAL ++NV AF +LT+IY +K D+
Sbjct: 128 DSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQVVMDDGQ 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSAS-------KRGCC 221
+ G +I + S++ K+GCC
Sbjct: 188 EWLKPSTSSGHKITPLAETPVSSTTSTHQEKKKGCC 223
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 135/160 (84%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+V+IGDS VGK+ +L+RF ++EFS++SK TIGVEF TKT+ D+K +KAQIWDTA
Sbjct: 9 DYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQE+YRA+T+AYYRGAVGA+ ++D+TK+ +FD++ +WL+EL+ +AD NIVIML+GNKCDL
Sbjct: 69 GQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLVGNKCDL 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTV 172
RAV TEDA FA+R L ++ETSAL++TNV+ AF V
Sbjct: 129 NENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRV 168
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 150/204 (73%), Gaps = 3/204 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y+++ DY+FK VLIGDSAVGKS LL+RF+R+EF +DSK TIGV+F + + + KT+KAQ
Sbjct: 6 YDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+L+YD+T+R +F ++ +WL ELRG + V++L+G
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DLG R V E+ + A+ E L+F+ETSALE NVE AFL+++ I+ ++++K+
Sbjct: 126 NKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKTAVD 185
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQD 211
N + G+ N +I P ++
Sbjct: 186 NRPN---GDGNNESNGAVIPPSKE 206
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 151/204 (74%), Gaps = 3/204 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y+++ DY+FK VLIGDSAVGKS LL+RF+R+EF +DSK TIGV+F + + + KT+KAQ
Sbjct: 6 YDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+L+YD+T+R +F ++ +WL ELRG + V++L+G
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DLG R V E+ + A+ E L+F+ETSALE NVE AFL+++ I+ ++++K +
Sbjct: 126 NKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLD 185
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQD 211
N + G+ N ++ PG++
Sbjct: 186 N---RLNGDGNNESNGAVVPPGKE 206
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 151/204 (74%), Gaps = 3/204 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y+++ DY+FK VLIGDSAVGKS LL+RF+R+EF +DSK TIGV+F + + + KT+KAQ
Sbjct: 6 YDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+L+YD+T+R +F ++ +WL ELRG + V++L+G
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DLG R V E+ + A+ E L+F+ETSALE NVE AFL+++ I+ ++++K +
Sbjct: 126 NKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLD 185
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQD 211
N + G+ N ++ PG++
Sbjct: 186 N---RLNGDGNNESNGAVVPPGKE 206
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 146/210 (69%), Gaps = 10/210 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D+++K+VLIG+S VGKS LL RF RNEF + ++TIGVEF T+++ + K ++AQIWDTA
Sbjct: 31 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 90
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA++VYD+TK +F + RWL EL+ +AD IVIM+IGNK DL
Sbjct: 91 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 150
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI-ISKKSLTANDEH 191
R + A+EF Q++NLFF ETSAL+ TNVETAF ++L EI++ S T+ND+
Sbjct: 151 AQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASTVEETSNDKP 210
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ +V + SK GCC
Sbjct: 211 AEKPD---------VVAIEPSPKESKGGCC 231
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 140/205 (68%), Gaps = 8/205 (3%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
+VLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+GNK DL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNS 197
VPTE+A FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+ + + S
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTSAITLGS 180
Query: 198 NLLKGTRIIVPGQDQNSASKRGCCL 222
GQD KR CC+
Sbjct: 181 --------AQAGQDPGPGEKRACCI 197
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 151/213 (70%), Gaps = 7/213 (3%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ D+++K+VL+G+S VGKS LL RF RNEF D ++TIGVEF T++++ K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+T+AYYRGA+GA++VYD+TK+ SF+ + +WL EL +ADK +V M+IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
CDL R V T + +E A++ N FF ETSAL+ +NVE AF+T+L +IY SK + +
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK---SVDG 181
Query: 190 EHDVAGNSNLLK-GTRIIVPGQDQNSASKRGCC 221
E N+N +K T I G N ++ CC
Sbjct: 182 EQ---SNTNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 151/213 (70%), Gaps = 7/213 (3%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ D+++K+VL+G+S VGKS LL RF RNEF D ++TIGVEF T++++ K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+T+AYYRGA+GA++VYD+TK+ SF+ + +WL EL +ADK +V M+IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
CDL R V T + +E A++ N FF ETSAL+ +NVE AF+T+L +IY SK + +
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK---SVDG 181
Query: 190 EHDVAGNSNLLK-GTRIIVPGQDQNSASKRGCC 221
E N+N +K T I G N ++ CC
Sbjct: 182 EQ---SNTNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 131/167 (78%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VL+GDS VGKS LL RF +NEF + + TIGVEF TK++ I+ + VKAQIWDTA
Sbjct: 11 DYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T AYYR AVGA+L+YD+T RQSF+++ +W EL H++ N V++L+GNKCDL
Sbjct: 71 GQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI 179
RA+ E+A++FAQ N+ F+ETSAL A NV AF ++TEI++I
Sbjct: 131 SDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI 177
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 154/215 (71%), Gaps = 5/215 (2%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
++++ DY+FK VLIGDS VGKS L++RFA++EF +DSK TIGVEF + + + K +KAQ
Sbjct: 7 FDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 66
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GAMLVYD+TKR +F ++ +WL ELR +++V++L+G
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVG 126
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL R V E+ + FA+ E L FMETSAL+ NV+ AFL ++T+I+ IIS+KSL
Sbjct: 127 NKSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSL-- 184
Query: 188 NDEHDVAGNS-NLLKGTRIIVPGQDQNSASKRGCC 221
E + G + NL G I + + + + CC
Sbjct: 185 --ETKMNGTALNLPSGKEIHIADEVTATKQAKYCC 217
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 156/225 (69%), Gaps = 12/225 (5%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
+SN + DY+ KVVL GDS VGK+ LL+RF RNEFS++S++TIGVEF T+++ ID
Sbjct: 17 LSNPPNYSEDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHID 76
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KT+KAQIWDTAGQ+RYRA+T+AYYR AVG + VYD+ KR +FD++ +WL E R D +
Sbjct: 77 GKTLKAQIWDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDD 136
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
+++ML+GNK DL LRAV +++A+ +A++ N+ ++ETSAL+ T+V+ AF ++L EIY I
Sbjct: 137 VILMLVGNKTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTI 196
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQD---QNSASKRGCCL 222
S+K L D G NL +V D + KR CC+
Sbjct: 197 SQKGL-----KDDTGGFNLPS----VVDSMDIGITETEEKRKCCV 232
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
Query: 43 DSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQS 102
+SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +
Sbjct: 14 ESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLT 73
Query: 103 FDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEA 162
++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ NL F+ETSA+++
Sbjct: 74 YENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSAMDS 133
Query: 163 TNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
TNVE AF +LTEIYRI+S+K + HD + +N++ + + P D +K CC
Sbjct: 134 TNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDIS--VPPTTDGQRPNKLQCCQ 191
Query: 223 S 223
S
Sbjct: 192 S 192
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 143/205 (69%), Gaps = 32/205 (15%)
Query: 17 KVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQER 76
++VLIGDS VGKS LL+RF RNEF++DSK+TIGVEF T+++ +D KT+K+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLR 136
YRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK DL LR
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 137 AVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGN 196
AVPTE+A++FA+ I+RI+S K+L + D
Sbjct: 151 AVPTEEAKQFAK---------------------------IFRIVSSKALDSGD-----SA 178
Query: 197 SNLLKGTRIIVPGQDQNSASKRGCC 221
N L +++ + Q+ SK+GCC
Sbjct: 179 QNPLSDRKVVEITKTQDPESKQGCC 203
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 129/155 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSAL 160
+GNK DL LRAVPT++A+ FA++ NL F+ +L
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIRDLSL 156
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/166 (63%), Positives = 133/166 (80%), Gaps = 1/166 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+ KVVLIGDS VGKS LL+RFA+NEF+++SK TIGVEF TKT+ K +KAQIWDTA
Sbjct: 10 DYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAV A LVYD+TK +F ++ +WL EL+ +AD NIV+ML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLVGNKTDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
+LRAV EDAQ +A++ L F+ETSAL++TNV AF ++ +IY
Sbjct: 130 NNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQII-QIYH 174
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 156/217 (71%), Gaps = 7/217 (3%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
+ ++ DY+FK VLIGDS VGKS LL+RFA++EF +DSK TIGVEF + + + K +KAQ
Sbjct: 8 FEEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 67
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R S++ + RWL ELR + +V++L+G
Sbjct: 68 IWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG 127
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NKCDLG R V E+A+ FA+ E L FMETSAL+ NVE FL ++T I+ I +++SL A
Sbjct: 128 NKCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA 187
Query: 188 N-DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
DE + NL G I + D+ +A+K+ C S
Sbjct: 188 KMDETPI----NLSNGKEIHIA--DEVTATKQAPCCS 218
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 147/218 (67%), Gaps = 15/218 (6%)
Query: 7 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKA 66
DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + +KA
Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAG E YR T YYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+
Sbjct: 64 QIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 122
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
GNK DL R VPT++A+ FA+ L F+ETSAL++TNVE AF TVL EI+ +SK+
Sbjct: 123 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 182
Query: 187 ANDEHDVA-GNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ + GN+ GQD + KR CC++
Sbjct: 183 STRSIPITLGNAQ---------AGQDPSPGEKRPCCIN 211
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 130/180 (72%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D + KVVLIGDS VGK+ L+RF R EF SK TIGVEF TK L+I+ +K QIWDTA
Sbjct: 12 DMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKCQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA+LVYD+T+ SF+ + RWL+ELR HA ++V+ML+GNK DL
Sbjct: 72 GQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLVGNKTDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
R V + QE AQRE L F+ETSAL+ +NVE AF V EI+ I+ K+ L + D
Sbjct: 132 VDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLESQAAED 191
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 153/215 (71%), Gaps = 5/215 (2%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
++++ DY+FK VLIGDS VGKS L++RFA++EF +DSK TIGVEF + + + K +KAQ
Sbjct: 7 FDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 66
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GAMLVYD+TKR +F ++ +WL ELR +++V++L+G
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVG 126
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL R V E+ + A+ E L FMETSAL+ NV+ AFL ++T+I+ IIS+KSL
Sbjct: 127 NKSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSL-- 184
Query: 188 NDEHDVAGNS-NLLKGTRIIVPGQDQNSASKRGCC 221
E + G + NL G I + + + + CC
Sbjct: 185 --ETKMNGTALNLPSGKEIHIADEVTATKQAKYCC 217
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 154/212 (72%), Gaps = 3/212 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q+ ++FK+VLIGDS+VGKS +L+RF + +F+ DS+ TIGVEF T++L+ + K ++AQIW
Sbjct: 7 QEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DT GQERY+++TSAYYRGAVGAML+YD+TK+++F+++ +W+ EL+ +A+ N+V MLIGNK
Sbjct: 67 DTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL + R VP++ A +FA+ + FME SA + TNV+ AF ++ EIY++I+K+SL N
Sbjct: 127 ADLKAQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSLAENQ 186
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + +I Q Q + S+ CC
Sbjct: 187 DQSIQQQMQSRNNMQI---QQSQCNQSQDTCC 215
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 135/170 (79%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ +++K +KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LIGNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
LRAVPT++A+ FA + F ETSAL + NV+ AF ++ I++++SK
Sbjct: 128 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK 177
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
D++FK+VL+GDS VGKS L+ RF +NEF+ DSK+TIGVEF TKT+ I D K VKAQIWDT
Sbjct: 7 DFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDT 66
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYR++ S+YYRGAVGA+LVYD+T R SF+H+ WL E+ +A+K+ +IML+GNK D
Sbjct: 67 AGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMD 126
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
L R V D + FA++ L F+ETSAL+AT V+TAF +L EIY+ +KK L +
Sbjct: 127 LHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKS 182
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 152/226 (67%), Gaps = 11/226 (4%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y ++ DY+FK VLIGDSAVGKS LL+RF+++EF DSK TIGVEF + + + K +KAQ
Sbjct: 6 YEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+L+YD+T+R +FD++ +WL ELR A+ V++L+G
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL R V ++ + A+ E LFF+ETSALE NVE AFL ++ I+ +++++ +
Sbjct: 126 NKSDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQRIASD 185
Query: 188 NDEHDVA-------GNSNLLKGTRIIVPGQD----QNSASKRGCCL 222
N + A GN +L + IV + Q +S CC
Sbjct: 186 NKSNGAATAHINGNGNGTVLPVGKEIVNIHEVTATQPLSSSSNCCF 231
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/226 (50%), Positives = 159/226 (70%), Gaps = 17/226 (7%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQI 68
++ D++FK+VLIGDS VGKS LL+RF +NEF+++SKATIGVEF TK+ S+++ ++VK QI
Sbjct: 8 EEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQI 67
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+T+ YYRGAVGA+LVYD+TK ++F+ + RWL EL +A+ IVI+L+GN
Sbjct: 68 WDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGIVILLVGN 127
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR V E+A EFA +NL F+ETSAL ++NV+ AF ++ +I++ S + + +
Sbjct: 128 KTDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEASSRLIVPD 187
Query: 189 -DEHDVAGNSNLL-----KGTRIIVPGQDQNSASKRG-------CC 221
DE + S + KG ++ QD N KRG CC
Sbjct: 188 KDEQNKNQRSKSMEMKKGKGVQLHEQNQDNN---KRGNSKVRGRCC 230
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 132/168 (78%), Gaps = 1/168 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VLIGD+ VGKS LL R+ +N+F ++S++TIGVEF T+ L + D VKAQIWDT
Sbjct: 13 DYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQIWDT 72
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+T+AYYR AVGA++VYD++K SF+++ +W+ ELR HAD NI I LIGNK D
Sbjct: 73 AGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGNKSD 132
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRI 179
L LRAV EDAQ+ AQ + F+ETSAL + NV+ AF+ ++ EIYR+
Sbjct: 133 LKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRL 180
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 127/166 (76%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY++K+VLIG+S VGKS LL RF RNEF + ++TIGVEF T+++ + K ++AQIWDTA
Sbjct: 7 DYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA++VYD+TK SF + RWL EL+ +AD IV+M++GNK DL
Sbjct: 67 GQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVGNKADL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
R V A+ F + + LFF ETSAL+ TNVETAF +L EIY+
Sbjct: 127 SQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIYK 172
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
++++ DY+FK VLIGDS VGKS LL+RFA++EF +DSK TIGVEF + + + K +KAQ
Sbjct: 7 FDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 66
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R S++ + RWL ELR + +V++L+G
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG 126
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NKCDLG R V E+A+ FA+ E L FMETSAL+ NVE FL ++T I+ I +++SL A
Sbjct: 127 NKCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA 186
Query: 188 N-DEHDVAGNSN 198
DE + SN
Sbjct: 187 KMDETPINHLSN 198
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 139/171 (81%), Gaps = 2/171 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY+F VLIGD+ VGK+ +L R+A+NEF D+K+T+GVEF +K ++ID+KT+KAQIW
Sbjct: 8 ERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTIKAQIW 65
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+T R +FD++ WL EL ++D ++ I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMTIVLVGNK 125
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
CDL +LR + +++A +FA++ N+ F+ETSA ++T ++ AF T+L+ IY I
Sbjct: 126 CDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/164 (60%), Positives = 129/164 (78%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+D + + IG L +RF RNEF++DSK+TIGVEF T+++ +D KT+KAQIWD
Sbjct: 15 PLDIAAQSLTIGALPPVTVPLQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 74
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRA+TSAYYRGAVGA+LVYD++K Q+++++ RWL ELR HAD NIVIML+GNK
Sbjct: 75 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 134
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
DL LRAVPT++A+ FA +L F+ETSAL+A+NVE AF +LT
Sbjct: 135 DLRHLRAVPTDEAKSFASENHLSFIETSALDASNVELAFQNILT 178
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FKVV+IGDS VGKS LL R+ + +F+++SK TIGVEF TK++ D K VKAQIWDT
Sbjct: 11 DYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDKKVVKAQIWDT 70
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+T+AYYRGAVGA+LVYD+T SF H++ WL EL+ +AD NIVI+L+GNK D
Sbjct: 71 AGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNIVILLVGNKTD 130
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIIS 181
L R V E+A +A + +L F+ETSAL+ +NV+ AF ++ EIY++IS
Sbjct: 131 LKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 151/227 (66%), Gaps = 12/227 (5%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
Y ++ DY+FK VLIGDSAVGKS LL+RF+++EF DSK TIGVEF + + + K +KAQ
Sbjct: 6 YEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+GA+L+YD+T+R +FD++ +WL ELR A+ V++L+G
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVG 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL R V ++ + A+ E L+F+ETSALE NVE AFL ++ I+ +++++ +
Sbjct: 126 NKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIASE 185
Query: 188 NDEHDVA-----GNSN---LLKGTRII----VPGQDQNSASKRGCCL 222
N + A GN N L G I+ V +S CC
Sbjct: 186 NKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCCF 232
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 143/186 (76%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FK+VLIGDS VGKS LL R+ +N+F ++S++TIGVEF T+++ ++ + V+AQIWDTA
Sbjct: 12 DHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYR AVGA+LVYD+TK ++ ++ RW+ ELR HA+ +I ++L+GNK DL
Sbjct: 72 GQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
S RAV E+A +A+ N+ F+ETSAL+ATNVE AF+ V+ +IY+ K+ N++
Sbjct: 132 KSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQTQIKEGQDDNNQDQ 191
Query: 193 VAGNSN 198
N++
Sbjct: 192 YTQNND 197
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 146/209 (69%), Gaps = 6/209 (2%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
++K+V+IG+S VGKS LL RF RNEF + K TIGVEF T+T+ + KT++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
E+YRA+T AYYRGA GAM VYD++K+ SFD + RW++EL+ D +I IM++GNK DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
R V T D EFAQ+ + FF+ETSALE TNVE AF +L +IY+ KK+ T ++ +
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIYK---KKNATLKNDSVPS 184
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRG--CC 221
NS ++ + Q Q++ ++ G CC
Sbjct: 185 DNSKPKTEEKVDIS-QTQSAQTQGGKKCC 212
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 144/214 (67%), Gaps = 5/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N+ DY+FKV+ GDS+VGKS +++R RN FS K T+GVEF T+ KT+ AQI
Sbjct: 6 NEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTIAAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDT G ERY + T + YRG GA+LVYD+T+R++F+++ +WL ELR HA+ N VIMLIGN
Sbjct: 66 WDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V TEDAQ+FA++E L FMETSA ++TNV+ A +L EI+R+ S+K L +
Sbjct: 126 KSDLQHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKELHSE 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCL 222
+ + V+ + + + + + GCCL
Sbjct: 186 ESNGVSTQDG-----KPTFGAKTRTNTQRTGCCL 214
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%)
Query: 39 EFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMT 98
+FS++SK+TIGVEF T+++ +D K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T
Sbjct: 15 KFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 74
Query: 99 KRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETS 158
+ +F+++ RWL ELR H D +IVIML+GNK DL LRAV +DA+ FA+REN FFMETS
Sbjct: 75 RHVTFENVERWLKELRDHTDSHIVIMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETS 134
Query: 159 ALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
ALE+ NVE AF VLT+IY+++S+K+L D+
Sbjct: 135 ALESMNVENAFTEVLTQIYQVVSRKALDIGDD 166
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 130/169 (76%), Gaps = 4/169 (2%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS DY DY+FK+VL GDS VGKS LL RF +N+F+ DSK TIGVEF T++++I
Sbjct: 1 MSKADDDY----DYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITIS 56
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
K VKAQIWDTAGQERYRA+T+AYYRGA+GA+LVYD+T +QSF+ + +W+ E+R +ADK+
Sbjct: 57 GKVVKAQIWDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKD 116
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAF 169
IVIM+IGNK DL LRA+ TE Q+ AQ + FME SA + TNV+ AF
Sbjct: 117 IVIMIIGNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAF 165
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 130/165 (78%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FK+VLIGDS VGKS L++RF +++FS++ + TIGVEF TKT+ I K +KAQIWDTA
Sbjct: 11 DFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA GA++V+D+TK+ SF+++A+W EL+ H+D IV MLIGNKCDL
Sbjct: 71 GQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
R + + A +FAQ ++ ++ETSAL +TNVE AF ++ IY
Sbjct: 131 ADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 175
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 132/171 (77%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+V+IGDSAVGKS LL RF RNEF+ +KATIGV+F TK++ I+ K + AQ WDTA
Sbjct: 7 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQCWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTS YYRGA+GAM+VYD+T + SF ++ RWL+ELR A+ +I++M++GNK DL
Sbjct: 67 GQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGNKSDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
S R V T +AQ FA+ + F+ETSAL +TNV +F +LT+IY +K
Sbjct: 127 ESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQK 177
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 123/144 (85%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQR 149
+GNK DL LRAVPT++A+ FA++
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEK 145
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 123/144 (85%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQR 149
+GNK DL LRAVPT++A+ FA++
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEK 145
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 133/177 (75%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY+FK VL GDS VGKS LL+RF++NEF DS+ TIGVEF + + + K VK QI
Sbjct: 6 DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQER+RA+TS+YYRGA+GA+LVYD+T+ +FD++ +WL ELR + +VI+L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
KCDL R V E+A+ A+ ENLFFMETSA + NVE AFL ++ I+ I S+K+L
Sbjct: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 147/210 (70%), Gaps = 18/210 (8%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK+VLIG+ VGKS LL+RF RNEF++ SK TIGVEF TK +S++ K VK QIWDTAG
Sbjct: 7 YLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAG 66
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
ER+R S+YYRGA+GA+LVYD++K ++++ + +WL LR HA+++IVI L+GNK DL
Sbjct: 67 MERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS 126
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
AVPT++A+ +A+R ++ F+ETSAL+ TNVE AF ++TEIY+++S+K D
Sbjct: 127 --HAVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEKY------KDH 178
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+G I+P N+ K CC
Sbjct: 179 SGT---------IIPSTASNTP-KNQCCFP 198
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDTA 72
Y FK+VL+GDS VGKS L+ RF +NEF+ DSK+TIGVEF TKT+ I D K VKAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYR++ S+YYRGAVGA+LVYD+T R SF+H+ WL E+ +A+K+ +IML+GNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
R V D + FA++ L F+ETSAL+AT V+TAF +L EIY+ +KK
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 146/209 (69%), Gaps = 6/209 (2%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
++K+V+IG+S VGKS LL RF RNEF + K TIGVEF T+T+ + KT++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
E+YRA+T AYYRGA GAM VYD++K+ SFD + RW++EL+ D +I IM++GNK DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
R V T D EFAQ+ + FF+ETSAL+ TNVE AF +L +IY+ KK+ T ++ +
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK---KKNATLKNDSVPS 184
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRG--CC 221
NS ++ + Q Q++ ++ G CC
Sbjct: 185 DNSKPKTEEKVDIS-QTQSAQTQGGKKCC 212
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 129/164 (78%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY++KVV+IGDS VGKS LL RF R+EF + K+TIGVEF +K + + +TV+ QIWDTA
Sbjct: 7 DYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGA+GA+LVYD+TK+ SF+ + RWL ELR +ADK +V M++GNKCDL
Sbjct: 67 GQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
+R V ++ ++ A++ FF ETSAL+ NVETAF+ ++ +I
Sbjct: 127 EQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKI 170
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 123/144 (85%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQR 149
+GNK DL LRAVPT++A+ FA++
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEQ 145
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 146/209 (69%), Gaps = 6/209 (2%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
++K+V+IG+S VGKS LL RF RNEF + K TIGVEF T+T+ + KT++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
E+YRA+T AYYRGA GAM VYD++K+ SFD + RW++EL+ D +I IM++GNK DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKADLKQ 127
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
R V T D EFAQ+ + FF+ETSAL+ TNVE AF +L +IY+ KK+ T ++ +
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK---KKNATLKNDSVPS 184
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRG--CC 221
NS ++ + Q Q++ ++ G CC
Sbjct: 185 DNSKPKTEEKVDIS-QTQSAQTQGGKKCC 212
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 145/209 (69%), Gaps = 6/209 (2%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
++K+V+IG+S VGKS LL RF RNEF + K TIGVEF T+T+ + KT++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
E+YRA+T AYYRGA GAM VYD++K+ SFD + RW++EL+ D +I IM++GNK DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
R V T D EFAQ+ + FF+ETSAL+ TNVE AF +L +IY+ KK+ T + +
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK---KKNATLKSDSVPS 184
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRG--CC 221
NS ++ + Q Q++ ++ G CC
Sbjct: 185 DNSKPKTEEKVDIS-QTQSAQTQGGKKCC 212
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTL-SIDHKTVKAQIWDT 71
DY+FK+V++GDS VGKS LL R+ +NEF+V+S T+G+EF TKT+ + ++ ++AQIWDT
Sbjct: 6 DYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQIWDT 65
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
GQERYR++TSAYYRGAVGA++VYD+T ++SFD++ WL ELR A+ NIV++L+GNK D
Sbjct: 66 CGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVGNKID 125
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
L R V EDA +FAQ + + F+ETSALE +NV+ AF ++ EI+R+++++S
Sbjct: 126 LKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQS 178
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 125/149 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RN+F+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFF 154
GNK DL LRAVPT++A+ FA++ + +
Sbjct: 122 AGNKSDLRHLRAVPTDEARAFAEKNTILY 150
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 128/164 (78%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY++KVV+IGDS VGKS LL RF R+EF + K+TIGVEF +K + + +TV+ QIWDTA
Sbjct: 7 DYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTA 66
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGA+GA+LVYD+TK+ SF+ + RWL ELR +ADK +V M++GNKCDL
Sbjct: 67 GQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDL 126
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
+R V ++ ++ A++ FF ETSA + NVETAF+ ++ +I
Sbjct: 127 EQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKI 170
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 145/209 (69%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGK+ +L RF NEF ++SK TIGVEF TKT K+VK QIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RA+T+AYYRGAVGA + YD+T+ +F + +WL EL+ HAD NIVI++IGNK D
Sbjct: 70 GQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGNKIDA 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
RAV T++AQ++ + + + F+ETSAL+ TN++ AF ++ I+ I K++ +
Sbjct: 130 VDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNIKKVVQ-- 187
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+A LL+ ++ Q ++ ++ GCC
Sbjct: 188 MATEQVLLEKPKVT---QSKSKKNREGCC 213
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 123/156 (78%)
Query: 18 VVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERY 77
VVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKAQIWDTAG ERY
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 78 RAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRA 137
RA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+GNK DL R
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 152
Query: 138 VPTEDAQEFAQRENLFFMETSALEATNVETAFLTVL 173
VPT++A+ FA+ L F+ETSAL++TNVE AF TVL
Sbjct: 153 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ D++FK+VLIGDS VGK+ +L RF N+F ++SK TIGVEF TKTL K+VK QI
Sbjct: 6 DEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+T+AYYRGAVGA + YD+T+ +F + +WL EL+ HAD NIVI++IGN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K D RAV T++A F +++ + F+ETSAL+ TN++ AF ++ I+ I K TA
Sbjct: 126 KTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSK--TAK 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V + +L + P Q ++ S GCC
Sbjct: 184 KVVQVETDPVVLSEQK--TP-QSKSKKSSEGCC 213
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 130/162 (80%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FK+VLIGDS VGKS LL+RF +++F D K TIGVEF T+++ D+K +KAQIWDTA
Sbjct: 11 DFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERY+++T+AYYRGAVGA+L+YD+TK SF ++ +WL+E+R HA+ +IVIML+GNK DL
Sbjct: 71 GQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
LR V E+A FA+ N+ F+E SAL+++NVE +F ++T
Sbjct: 131 KHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLIT 172
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 125/155 (80%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VLIG+S VGK+ LL+RF RNEF+ DS+ TIGVEF T+T+ + VKAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TSAYYRGAVGA++V+D+TK Q++D + RWL EL HA+ +IV+ML+GNK DL R V
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVL 173
PTE+A+ FA+ + L F+ETSAL++TNVE AF TVL
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDT 71
DY+FK+VLIGDS VGKS LL RF + F +DSK+TIGVEF TK + + + K KAQIWDT
Sbjct: 8 DYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQIWDT 67
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGA GA++VYD+ RQSF ++RWL EL + D N+VI+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLAGNKSD 127
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
L +LR V TEDA+ FA+ NL F ETS L + NVETAF +L+ I
Sbjct: 128 LVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 118/142 (83%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
+ F VVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 134 SLRAVPTEDAQEFAQRENLFFM 155
LRAVPT++A+ FA R N F
Sbjct: 121 HLRAVPTDEAKAFAGRTNSFLF 142
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 128/165 (77%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D+++K+VL+G+S VGKS LL RF RNEF D ++TIGVEF T+++ K ++AQIWDTA
Sbjct: 10 DFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNIRAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGA+GA++VYD+TK+ SF+ + RWL+EL +AD+ ++ M+IGNK DL
Sbjct: 70 GQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQMIIGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
R V TE+ ++ A+ FF ETSAL+ NVE AF+T+L +IY
Sbjct: 130 NQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIY 174
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 127/163 (77%), Gaps = 2/163 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
++V+KVVLIG+S VGKS LL+RF +NEF+ DS+ TIGVEF T+T+ ++ TVKAQIWDTA
Sbjct: 8 NFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G ERYRA+TSAYYRGAVGA+LVYD++K +++ RWL EL HAD +IV+ML+GNK DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGNKRDL 127
Query: 133 GSLRAVPTEDAQEFAQRE--NLFFMETSALEATNVETAFLTVL 173
+LR VP+E + E L FMETSAL++TNVE AF VL
Sbjct: 128 ENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 130/172 (75%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D ++KVV+IGDS VGKS L+ RF +N+F+ D+K TIGVEF K++ D T+K QIWDTA
Sbjct: 4 DVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWDTA 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RA+++AYYRGA GA++VYD+T ++SFD++ +W E+ + + +L+GNKCDL
Sbjct: 64 GQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKCDL 123
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LR V T + FA++ N+ FMETSAL++TNV+ AF T+L EIY+ S+KS
Sbjct: 124 NHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKS 175
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 130/161 (80%)
Query: 16 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQE 75
F VVLIGDS VGK+ +L+RFA +EF++DSKAT+GVEF K + +++ +KAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSL 135
RYR++TSAYYRGAVGA++VYD+T R SF+++ WL ELR H+D ++V++LIGNKCDL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 136 RAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
R++ T++A+ +A++ N+ F+ETSA E T ++ AF VL +
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 93/141 (65%), Positives = 118/141 (83%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
++ DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T+++ +D K +KAQI
Sbjct: 7 DEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVLKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQR 149
K DL LRAV TE+ FA+R
Sbjct: 127 KADLRHLRAVSTEETTNFAER 147
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 145/209 (69%), Gaps = 18/209 (8%)
Query: 15 VFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQ 74
+ VVLIG+ VGKS LL+RF RNEF++ SK TIGVEF TK +S++ K VK QIWDTAG
Sbjct: 22 IISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGM 81
Query: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGS 134
ER+R S+YYRGA+GA+LVYD++K ++++ + +WL LR HA+++IVI L+GNK DL
Sbjct: 82 ERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS- 140
Query: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVA 194
AVPT++A+ +A+R ++ F+ETSAL+ TNVE AF ++TEIY+++S+K +H
Sbjct: 141 -HAVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEKY----KDHS-- 193
Query: 195 GNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
GT I+P N+ K CC
Sbjct: 194 -------GT--IIPSTASNTP-KNQCCFP 212
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 141/192 (73%), Gaps = 9/192 (4%)
Query: 34 RFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAM 92
RF R+EF+++SK+TIGVEF TK++ + + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 93 LVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENL 152
LVYD+TK+ +F+++ +WL ELR +AD NIVI+L+GNK DL LR + DA +FA++E L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 153 FFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNL-LKGTRIIV-PGQ 210
F+ETSALEATNVE AF +L EIY + KK T +++ N N+ +G +I V
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSED-----NVNIQPRGKKINVDDDN 190
Query: 211 DQNS-ASKRGCC 221
D+N K CC
Sbjct: 191 DENEKKPKTKCC 202
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 118/136 (86%)
Query: 39 EFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMT 98
+F++DSK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 99 KRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETS 158
K Q+++++ RWL ELR HAD NIVIML+GNK DL LRAVPTE+A++FA NL F+ETS
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETS 125
Query: 159 ALEATNVETAFLTVLT 174
AL+A+NVE AF +LT
Sbjct: 126 ALDASNVELAFQNILT 141
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K VK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPVKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D SAS GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGPSASAGGCC 210
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 137/212 (64%), Gaps = 10/212 (4%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I DV
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVF------DV 178
Query: 194 AGNSNLLKGTRIIVP----GQDQNSASKRGCC 221
+ S +K +P G+D SAS GCC
Sbjct: 179 SNESYGIKVGYGGIPGPSGGRDGPSASAGGCC 210
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 141/216 (65%), Gaps = 7/216 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+R+ +NEF + SKATIGVE + + I+ KTV+AQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGA+GA+LVYD+ K SF ++ +W++ELR HA ++ I+LIGNK DL
Sbjct: 76 GQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDL 135
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-H 191
LR + ++FA + FMETSAL++TNV AF + I+ + + L + + H
Sbjct: 136 KHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEKSGQAH 195
Query: 192 DVA-GNSNLLKGTRIIVPGQDQNSASKR-----GCC 221
+ G S ++K +P R CC
Sbjct: 196 EKPNGESIVIKAELAELPATPNGKEHARTRQSKSCC 231
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 126/169 (74%), Gaps = 5/169 (2%)
Query: 56 TLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRG 115
++ +D K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RW+ EL+
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKD 60
Query: 116 HADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTE 175
H D NIVIML+GNK DL LRAV TEDA+ FA++EN FFMETSALE+ NVE AF VLT+
Sbjct: 61 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQ 120
Query: 176 IYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
IY ++SKK+L D D A KG I V G+D SA K+ C SS
Sbjct: 121 IYHVVSKKALDIGD--DPAAPP---KGQTINVGGKDDVSAVKKSACCSS 164
>gi|351726934|ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory protein [Glycine max]
Length = 211
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL+ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEHARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D SAS GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGPSASAGGCC 210
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D ++K+VLIGDS VGK+ +L +F R EF DSK TIGVEF +K + ID KTVKAQIWDTA
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGAM++YD+TK +F+++ +W+ EL+ +AD ++ IM++GNK D
Sbjct: 69 GQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQ 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+R V T+ A +AQR + F+ETSA + TNVE AF +L +IY+ T
Sbjct: 129 KHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTKF 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V +++++K + GCC
Sbjct: 189 VVADTDVVKPEK------------SSGCC 205
>gi|242097064|ref|XP_002439022.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
gi|241917245|gb|EER90389.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
Length = 209
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 136/195 (69%), Gaps = 14/195 (7%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DYVFK+V+IGDSAVGK+QLL RF R+EF +DSK+TIG+EFQT+T+ I VKAQIWDTA
Sbjct: 4 DYVFKIVVIGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G YYRGA+GAMLVYD+T R H ARW+ ELR HADK+IV+ML+GNK DL
Sbjct: 64 GAR-------TYYRGALGAMLVYDVTSR----HAARWVTELRAHADKSIVVMLVGNKADL 112
Query: 133 -GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
G++R T FA+ + LFF E SAL NVE AFLT+L EI+ +S+K L A +
Sbjct: 113 AGAVRWRQTRRPL-FAEEQGLFFSEASALSGDNVERAFLTLLQEIHANVSRKRLEAAPDE 171
Query: 192 DVAGNSNL-LKGTRI 205
D L LKGT++
Sbjct: 172 DTGAADVLALKGTKL 186
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQIWDT 71
DY+FK+VLIGDS VGKS LL RF + F +DSK+TIGVEF TK +++ + KT KAQIWDT
Sbjct: 8 DYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQIWDT 67
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGA GA++VYD+ +QSF +++RWL EL + D N++I L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVGNKSD 127
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEH 191
L LR V +ED + +A NL F ETS L N++TAF +L+ I K TA+ E
Sbjct: 128 LTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSICENHEKFGDTAHGEQ 187
>gi|75337332|sp|Q9SJZ5.1|RAA4E_ARATH RecName: Full=Putative Ras-related protein RABA4e; Short=AtRABA4e
gi|4544452|gb|AAD22360.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 176
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 128/176 (72%), Gaps = 25/176 (14%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+++DYVFKVVL GDSAVGKSQL ARF R+EFS+DSKATI FQ
Sbjct: 4 EEVDYVFKVVLNGDSAVGKSQLRARFTRDEFSMDSKATIRCRFQYSN------------- 50
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
+ YY+GAVGAMLVYDMT R+SF+H+ +WL+ELR HADKNIVI+LIGNK
Sbjct: 51 ------------APYYKGAVGAMLVYDMTIRESFEHIPQWLEELRVHADKNIVIILIGNK 98
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
DL + R+VP EDA+EFA++E LFF+ETSAL +TNVE +F T+LTEI+ ++KK+L
Sbjct: 99 TDLENQRSVPVEDAKEFAEKEGLFFLETSALNSTNVENSFNTLLTEIFNKVNKKNL 154
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQ 67
+Q DY+FK+VLIGDS VGKS LL RF + F +DSK+TIGVEF TKT+++++ K KAQ
Sbjct: 4 DQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKAQ 63
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQERYRA+TSAYYRGA+GA++VYD+ + SF ++++WL EL +AD NI I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLVG 123
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
NK DL LR V ED + FA+ +L F ETS L + NV+ AF +L++I
Sbjct: 124 NKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|168048429|ref|XP_001776669.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671961|gb|EDQ58505.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 161
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/163 (61%), Positives = 126/163 (77%), Gaps = 5/163 (3%)
Query: 59 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD 118
+D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +++++ RWL ELR HAD
Sbjct: 2 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHAD 61
Query: 119 KNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
NIVIML+GNK DL LR V T+DAQ F+++E L F+ETSALE+TNVE AF +LTEIYR
Sbjct: 62 SNIVIMLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYR 121
Query: 179 IISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
I+SKK+L A++E+ G +GT IVP K+GCC
Sbjct: 122 IVSKKAL-ASEENTTEGPG---QGTN-IVPLDSNAPDLKKGCC 159
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D SA GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGGSAQAGGCC 210
>gi|357448155|ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago truncatula]
gi|355483401|gb|AES64604.1| Small GTP binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D SA+ GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGPSAAGGGCC 210
>gi|388514081|gb|AFK45102.1| unknown [Lotus japonicus]
Length = 211
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKDLGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D SAS GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGPSASAGGCC 210
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 155/216 (71%), Gaps = 4/216 (1%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQ 67
++++ DY+FK VLIGDS VGKS L++RFA++EF +DSK TIGVEF + + + K +KAQ
Sbjct: 6 FDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 65
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQER+RA+TS+YYRGA+G MLVYD+T+R +F ++ +WL ELR ++++V++L+
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVA 125
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL R V E+ +EFA+ E L FMETSAL+ NVE AFL ++T+I+ IIS+KSL
Sbjct: 126 NKSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQKSL-- 183
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
E + G + L + D+ +A+K+ C S
Sbjct: 184 --ETKMNGPTTLSVPIGKEIQVADEVTATKQANCCS 217
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 138/209 (66%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ + FA+ L FME SA A NVE AF++ + IY+ I + +N+ +
Sbjct: 125 HRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFISTASTIYKKIQEGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D +S+ GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGSSSQAGGCC 210
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 131/171 (76%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D++FK++LIGDS VGK+ +L RF +NEF +DSK TIGVEF TKT+++++K+VK QIWDTA
Sbjct: 10 DFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T+AYYRGAVGA + YD+T+ +F ++ +WL E++ +A KNIVIM+IGNK D
Sbjct: 70 GQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGNKIDQ 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+ R V + +A + Q+ + ++ETSA NVE AF +++EI+ +S K
Sbjct: 130 ANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSK 180
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 138/205 (67%), Gaps = 6/205 (2%)
Query: 19 VLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYR 78
VL GDS VGKS LL+RF++NEF DS+ TIGVEF + + + K VK QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 79 AVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAV 138
A+TS+YYRGA+GA+LVYD+T+ +FD++ +WL ELR + +VI+L+GNKCDL R V
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 139 PTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD--VAGN 196
E+A+ A+ ENLFFMETSA + NVE AFL ++ I+ I S+K+L + + + VA
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVA-- 178
Query: 197 SNLLKGTRIIVPGQDQNSASKRGCC 221
G II + + CC
Sbjct: 179 --FPNGKEIISIHEVTPTKPNSNCC 201
>gi|388501410|gb|AFK38771.1| unknown [Medicago truncatula]
Length = 211
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R +T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRPITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKENGLIFMEASAKAAQNVEEAFIKTAGTIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D SA+ GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGPSAAGGGCC 210
>gi|255637328|gb|ACU18994.1| unknown [Glycine max]
Length = 211
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D AS GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGPFASAGGCC 210
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 140/214 (65%), Gaps = 11/214 (5%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L F+ETSA A NVE AF+ EIY+ I +N+ +
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184
Query: 193 V-----AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AGN+ G + + PG+ +A CC
Sbjct: 185 IKVGYGAGNA----GPQTVKPGEG-GAAKSSSCC 213
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D ++K+VLIGDS VGK+ +L +F R EF DSK TIGVEF +K + +D KT+KAQIWDTA
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIWDTA 68
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGAM++YD+TK +F+++ +W+ EL+ +AD ++ IM++GNK D
Sbjct: 69 GQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQ 128
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
+R V T+ A +AQR + F+ETSA + TNVE AF +L +IY+ T
Sbjct: 129 KHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTKF 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
V +++++K + GCC
Sbjct: 189 VVADTDVVKPEK------------SSGCC 205
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D +A GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGATAQSGGCC 210
>gi|297790260|ref|XP_002863031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308833|gb|EFH39290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 123/174 (70%), Gaps = 17/174 (9%)
Query: 55 KTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELR 114
+ ++++ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR
Sbjct: 2 RVITVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 61
Query: 115 GHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
HAD NIVIM+ GNK DL LR+V ED Q A+ E L F+ETSALEATNVE AF TVL
Sbjct: 62 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 121
Query: 175 EIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQ-------DQNSASKRGCC 221
EIY IISKK+L A + +PGQ D + A KRGCC
Sbjct: 122 EIYHIISKKALAAQEAAAAN----------SAIPGQGTTINVGDTSGAGKRGCC 165
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQ 67
+Q DY+FK+VLIGDS VGKS LL RF + F +DSK+TIGVEF TK +++++ K KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKAQ 63
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQERYRA+TSAYYRGA+GA++VYD+ + SF +++WL EL +AD NI I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLVG 123
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
NK DL LR V ED + FA +L F ETS L + NV+ AF +L++I
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI 172
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 137/210 (65%), Gaps = 3/210 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L F+ETSA A NVE AF+ EIY+ I +N+ +
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184
Query: 193 V-AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G G + + PG+ +A CC
Sbjct: 185 IKVGYGGGNAGPQTVKPGEG-GAAKSSSCC 213
>gi|388493968|gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKENGLIFMEASAKTTQNVEEAFIKTAGTIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D SA+ GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGPSAAGGGCC 210
>gi|15235981|ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName: Full=Ras-related protein RABB1c; Short=AtRABB1c; AltName:
Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis thaliana]
gi|5281023|emb|CAB45962.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis thaliana]
gi|297313917|gb|EFH44340.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|332658457|gb|AEE83857.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
Length = 211
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D +++ GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGSTSQGGGCC 210
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 140/214 (65%), Gaps = 7/214 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQ 67
+Q DY+FK+VLIGDS VGKS LL RF + F +DSK+TIGVEF TK + +++ K KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKAQ 63
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQERYRA+TSAYYRGA+GA++VYD+ + SF +++WL EL +AD NI I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLVG 123
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTA 187
NK DL LR V ED + FA +L F ETS L + NV+ AF +L+ RI K +
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLS---RISEKHTRFD 180
Query: 188 NDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ V+G S + K T IV G K CC
Sbjct: 181 SSTFPVSG-STMPKNT--IVLGVKAMRKKKISCC 211
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 6/208 (2%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
+ +VV+IG+S VGKS LL RF RNE+ + K TIGVEF T+T+ D KT++AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE+YRA+T AYYRGA GA+ VYD++K+ +F + RW+ EL+ ++VIM++GNK DL
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
R V + +EFAQR N FFMETSAL NVE AF +L IY+ KK+ T E
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIYK---KKNTTITPEKTA 197
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
++ R+ + Q+S K+ CC
Sbjct: 198 ETQKPSVED-RVNI--NKQSSEEKKKCC 222
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ + IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIRTASTIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G G+D ++ GCC
Sbjct: 185 IKVGYGGIPGPS---GGRDGAASQGGGCC 210
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 121/158 (76%)
Query: 20 LIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRA 79
L DS VGKS L++RF +++FS++ + TIGVEF TKT+ I K +KAQIWDTAGQERYRA
Sbjct: 1104 LACDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRA 1163
Query: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVP 139
+TSAYYRGA GA++V+D+TK+ SF+++A+W EL+ H+D IV MLIGNKCDL R +
Sbjct: 1164 ITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNIS 1223
Query: 140 TEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY 177
+ A +FAQ ++ ++ETSAL +TNVE AF ++ IY
Sbjct: 1224 KDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 1261
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 130/184 (70%), Gaps = 4/184 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSI-DHKTVKAQ 67
+Q DY+FK+VLIGDS VGKS LL RF + F +DSK+TIGVEF TK +++ + K KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIG 127
IWDTAGQERYRA+TSAYYRGA GA++VYD+ +QSF +++RWL EL + D N++I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 128 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAF---LTVLTEIYRIISKKS 184
NK DL LR V ED + +A+ NL F ETS L N++T F L ++ + + S
Sbjct: 124 NKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTFTELLNLICDNHEKFGDTS 183
Query: 185 LTAN 188
+TAN
Sbjct: 184 VTAN 187
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 119/142 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + D++FKVVLIGDS VGKS LL+RF RN+F+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIM
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMP 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFA 147
NK DL LRAVPT++A+ FA
Sbjct: 122 ADNKSDLRHLRAVPTDEARAFA 143
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 139/214 (64%), Gaps = 15/214 (7%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKADLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
RAV TE+ ++FA+ L FMETSA A NVE AF+ ++I++ I E V
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQKI---------EEGV 175
Query: 194 AGNSNLLKGTRIIV----PGQDQNSASKR--GCC 221
SN G +I V PG +S+ + GCC
Sbjct: 176 FDVSNEASGIKIGVLPNHPGHRGDSSGPQSGGCC 209
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 125/169 (73%), Gaps = 9/169 (5%)
Query: 54 TKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDEL 113
T+++ I KTVKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T++ +F+++ RWL EL
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKEL 60
Query: 114 RGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVL 173
R H D NIVIML+GNK DL LRAVPTE+A FA+REN +FMETSALE+ NV+ AF+ VL
Sbjct: 61 RDHTDANIVIMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVL 120
Query: 174 TEIYRIISKKSL-TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+EIY ++S+K+L ND + + G D ++ K GCC
Sbjct: 121 SEIYNVVSRKTLEKGNDPGALPQGQTINLG--------DVSAVKKPGCC 161
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKSDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I +N+ +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + G+ G+D SA GCC
Sbjct: 185 IKVGYGGIPGSS---GGRDGASAQAGGCC 210
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2 homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 138/214 (64%), Gaps = 11/214 (5%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV TE+ ++FA+ L F+ETSA A NVE AF+ EIY+ I +N+ +
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184
Query: 193 V-----AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AGN+ G + PG+ S CC
Sbjct: 185 IKVGYGAGNA----GPQAAKPGEGDARKSS-SCC 213
>gi|429327079|gb|AFZ78868.1| Rab GTPase-like protein [Coptotermes formosanus]
Length = 212
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 123/166 (74%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
+ DY+FK+V++GDS VG++ LL +F + F S++TIGVEF+ KT+ ++ K+VK QIWD
Sbjct: 5 EFDYIFKIVIVGDSGVGRTNLLLQFVQGVFIPQSRSTIGVEFRVKTVEVNGKSVKIQIWD 64
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRA+T YYRGAV A+L+YD+T S++ + +W+DEL+ HAD N+++MLIGNKC
Sbjct: 65 TAGQERYRAITKNYYRGAVVALLLYDITSSSSYNSLQKWIDELKMHADGNVIVMLIGNKC 124
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
DL R V DAQ A + F ETSA EATNV+ AF+ ++ E+
Sbjct: 125 DLSGQRTVLEADAQNLANDNSFLFFETSAKEATNVKEAFMALVREL 170
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 15/229 (6%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID--- 60
+ D + DY+ K+V++GDS VGKS +++RF + F SK TIGV F TK ++++
Sbjct: 1 MNSDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSN 60
Query: 61 ------HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELR 114
K VK Q+WDTAGQERYRA++SAYYRGA GA++VYD+T R+S D + +WL+E+
Sbjct: 61 DSTKDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEID 120
Query: 115 GHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
+ +++V+ L+GNK DL R V E+ ++ A REN+FF+ETSA +ATN+E AF ++
Sbjct: 121 KYCTQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIK 180
Query: 175 EIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQ---DQNSASKRGC 220
E II AN++ +AG + G + P + D N+ + GC
Sbjct: 181 E---IIQSNLSQANNDGKIAGKAPSDTGITLKPPEEPESDPNAPPQPGC 226
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 148/216 (68%), Gaps = 7/216 (3%)
Query: 8 YNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLS-IDHKTVKA 66
+++ DY+FKV IG+S VGKS L++RFA++EF +DSK +IGVEF + + K +KA
Sbjct: 7 FDEHCDYLFKVX-IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKA 65
Query: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLI 126
QIWDTAGQER+RA+TS+YYRGA+GAMLVYD+TKR +F ++ +WL ELR +++V++L+
Sbjct: 66 QIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLV 125
Query: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLT 186
NK DL R V E + FA+ E L FMETSAL+ NV+ AF ++T+I+ IIS+KSL
Sbjct: 126 RNKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSL- 184
Query: 187 ANDEHDVAGNS-NLLKGTRIIVPGQDQNSASKRGCC 221
E + G + NL G I + + + + CC
Sbjct: 185 ---ETKMNGAALNLPSGKEIHIADEVTATKQAKYCC 217
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D ++K V++GDS GK+ LL RF RNEF + K+TIGVEF +K + V+ QIWDTA
Sbjct: 5 DVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIWDTA 64
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+T AYYRG++GA++VYD+TK+ SF+ + RW +EL + DK++V M+IGNKCDL
Sbjct: 65 GQERYRAITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIGNKCDL 124
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY-RIISKKSLTANDEH 191
+R V TE+A+EFA++ +F ETSA++ TNVE AF+ ++ I R KK+ A
Sbjct: 125 EQMREVTTEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMIETICDRQFEKKAAEAKP-- 182
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L + I P Q K+ CC
Sbjct: 183 --AQKPFLEERVVIEDPQVPQEPPKKKFQCC 211
>gi|298709147|emb|CBJ31092.1| Rab2A, RAB family GTPase [Ectocarpus siliculosus]
Length = 208
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 8/210 (3%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + +SID++ +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R +F+H+ RWL+E R +++ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLT 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIY-RIISKKSLTANDEHD 192
S RAV T++ ++FA+ L F+ETSA ATNVETAF+ +IY I+S N+ H
Sbjct: 125 SRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHG 184
Query: 193 VA-GNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G + L + P A K CC
Sbjct: 185 IKLGPAASLNYNNVAPP------ADKSSCC 208
>gi|168061692|ref|XP_001782821.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162665723|gb|EDQ52398.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 126/177 (71%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
RAV TE+ ++FA+ L FMETSA A NVE AF+ +IY+ I + ++E
Sbjct: 125 HRRAVSTEEGEQFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQKIEEGIFDVSNE 181
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQI 68
Q DY+FK+VLIGDS VGKS LL RF + F +DSK+TIGVEF TK +++ + K KAQI
Sbjct: 4 QTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQI 63
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA GA++VYD+ +QSF +++RWL EL + D N++I L+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALVGN 123
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEI 176
K DL LR V ED + +A+ NL F ETS L N++T F +L I
Sbjct: 124 KSDLTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|168046616|ref|XP_001775769.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162672921|gb|EDQ59452.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 212
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 125/177 (70%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
RAV TE+ ++FA+ L FMETSA A NVE AF+ +IY+ I + ++E
Sbjct: 125 HRRAVSTEEGEQFAKENGLVFMETSAKTAQNVEDAFINTAAKIYQKIEEGIFDVSNE 181
>gi|168049241|ref|XP_001777072.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671515|gb|EDQ58065.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 125/177 (70%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
RAV TE+ + FA+ L FMETSA A NVE AF+ +IY+ I + ++E
Sbjct: 125 HRRAVSTEEGERFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQKIEEGIFDVSNE 181
>gi|15235980|ref|NP_193449.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
gi|75318151|sp|O23561.1|RAB1A_ARATH RecName: Full=Ras-related protein RABB1a; Short=AtRABB1a; AltName:
Full=Ras-related protein Rab2B; Short=AtRab2B
gi|2245075|emb|CAB10497.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268467|emb|CAB80987.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|67633750|gb|AAY78799.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332658456|gb|AEE83856.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
Length = 205
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y FK ++IGD+ VGKS LL +F F TIGVEF KT++ID+K +K QIWDTAG
Sbjct: 5 YRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R+VT +YYRG G +LVYD+T+R++F+H+A WL+E R HA +N+ MLIGNKCDL
Sbjct: 65 QESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
R V TE+ ++FA+ L FME SA A NVE AF+ IY+ I + D
Sbjct: 125 DKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVV------DE 178
Query: 194 AGNSNLLKGTRIIVPGQDQNSA-SKRGCC 221
A + G G+D +S+ +RGCC
Sbjct: 179 ANEPGITPGP---FGGKDASSSQQRRGCC 204
>gi|357164075|ref|XP_003579941.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 210
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 135/212 (63%), Gaps = 11/212 (5%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IML+GNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLS 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
RAV E+ ++FA+ L FME SA A NVE F+ IY+ I DV
Sbjct: 125 HRRAVSYEEGEQFAKDNGLIFMEASAKTAQNVEEGFVKTAGAIYKKIQDGVF------DV 178
Query: 194 AGNSNLLKGTRIIVPGQD----QNSASKRGCC 221
+ S +K +VPGQ +S+ GCC
Sbjct: 179 SNESYGIK-VGYVVPGQSGGAGASSSQGGGCC 209
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 128/173 (73%), Gaps = 1/173 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDH-KTVKAQIWDT 71
DY++K+VLIGDS VGKS LL R+ +NEF+++SK+TIGVEF T + + K K QIWDT
Sbjct: 8 DYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQIWDT 67
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCD 131
AGQERYRA+TSAYYRGAVGA++ YD+T R SF+++ RWL ELR +A + VI L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVGNKVD 127
Query: 132 LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
+ +LR V ++ + A+ EN+ F+E SAL++TNV AF ++ IY +K +
Sbjct: 128 MVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIYTTQAKTT 180
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 119/146 (81%), Gaps = 2/146 (1%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSN DY DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ ++
Sbjct: 1 MSN--EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVE 58
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N
Sbjct: 59 NKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDN 118
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEF 146
+ + LIGNK DL LRAVPT++A++F
Sbjct: 119 VAVGLIGNKSDLAHLRAVPTDEAKKF 144
>gi|440800473|gb|ELR21511.1| Rab GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 144/229 (62%), Gaps = 15/229 (6%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID--- 60
+ D + DY+ K+V++GDS VGKS +++RF + F SK TIGV F TK ++++
Sbjct: 1 MNSDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSN 60
Query: 61 ------HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELR 114
K VK Q+WDTAGQERYRA++SAYYRGA GA++VYD+T R+S D + +WL+E+
Sbjct: 61 DSTKDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEID 120
Query: 115 GHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLT 174
+ +++V+ L+GNK DL R V E+ ++ A REN+FF+ETSA +ATN+E AF ++
Sbjct: 121 KYCTQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIK 180
Query: 175 EIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQ---DQNSASKRGC 220
E II N++ +AG + G + P + D N+ + GC
Sbjct: 181 E---IIQSNLSQVNNDGKIAGKAPSDTGITLKPPEEPESDPNAPPQSGC 226
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + +SID+K +K QIWDTAG
Sbjct: 6 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDNKQIKLQIWDTAG 65
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R +F+H+ WL++ R H++ N+VI+LIGNK DL
Sbjct: 66 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARSHSNPNMVIILIGNKTDLD 125
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
S RAV E+ ++FA+ L FMETSA ATNVE AF+ IY I + +E +
Sbjct: 126 SKRAVTREEGEQFARENGLIFMETSAKNATNVEEAFIQTAQAIYSKIQENVFDIKNEMNG 185
Query: 194 AGNSNLLKG----TRIIV--PGQDQNSASKRGCC 221
L G TR+ + P Q ++ GCC
Sbjct: 186 IKVGPQLAGGAGSTRLDLRAPQQKPTNSEGGGCC 219
>gi|168022844|ref|XP_001763949.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162684954|gb|EDQ71353.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 126/177 (71%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++I++K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIENKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
RAV TE+ ++FA+ L FMETSA A NVE AF+ +IY+ I + ++E
Sbjct: 125 HRRAVSTEEGEQFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQKIEEGIFDVSNE 181
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
S R V E+ + FA+ L FMETSA A NVE AF+ EIY I + N+E +
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 194 AGNSNLLKGTRIIVPGQ-DQNSASKRGCC 221
T +PG A GCC
Sbjct: 185 IKIGQQATPTNPALPGSGGAGGAVNSGCC 213
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 2/213 (0%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + DY+FK++LIG+S VGKS LL RF+ + ++ D +TIGV+F+ KT+ +D KTVK QI
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQER+R +TS+YYRG+ G ++VYD+T + SFD + WL E+ +A ++ +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDRYATSTVLKLLVGN 121
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL R V + A+EFA N+ F+ETSAL++TNVE AFLT+ +I ++++ L N
Sbjct: 122 KCDLNDKRVVEYDVAKEFADANNMPFLETSALDSTNVEEAFLTMARQIKESMAQQKL-QN 180
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AGN+ + + GQ + S GCC
Sbjct: 181 GANGQAGNNQQNANKNVNLNGQSLTNQSS-GCC 212
>gi|125546393|gb|EAY92532.1| hypothetical protein OsI_14270 [Oryza sativa Indica Group]
Length = 168
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 125/163 (76%), Gaps = 3/163 (1%)
Query: 59 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD 118
++ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD
Sbjct: 7 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHAD 66
Query: 119 KNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
NIV+MLIGNK DL LR+V EDA FA+RE L F+ETSAL+ATNV+ AF TVLTEIYR
Sbjct: 67 SNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYR 126
Query: 179 IISKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
IISKK+L A+ AG + +G I V D +S + R CC
Sbjct: 127 IISKKALAAD--EAGAGAGAVREGQSIQVSATDSSSFTSR-CC 166
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 131/209 (62%), Gaps = 1/209 (0%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R +F+H+ WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
S R V E+ + FA+ L FMETSA A NVE AF+ EIY I + N+E +
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 194 AGNSNLLKGTRIIVPGQ-DQNSASKRGCC 221
T +PG Q ++ GCC
Sbjct: 185 IKIGQQHSPTYPALPGTGSQAGSASSGCC 213
>gi|359474684|ref|XP_003631513.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab11D-like
[Vitis vinifera]
Length = 151
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/128 (74%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YG+ +QKI+YVFKVV+IGD+ VGKS RFARNEFS+DSKAT GVE QT+TL I K+V
Sbjct: 7 YGNSSQKINYVFKVVMIGDTEVGKSX--TRFARNEFSLDSKATTGVESQTRTLVIRRKSV 64
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDT GQER+ AVTSAYYR AV AMLVYD+TKRQSFDH+ RWL+E RGHADK I+I+
Sbjct: 65 KAQIWDTTGQERHGAVTSAYYRSAVDAMLVYDITKRQSFDHIPRWLEESRGHADKTILII 124
Query: 125 LIGNKCDL 132
LIGNK DL
Sbjct: 125 LIGNKTDL 132
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 140/212 (66%), Gaps = 11/212 (5%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q+ DY+FK++LIG+SAVGKS LL RFA N F+ TIGV+F+ +T ++ KTVK QIW
Sbjct: 5 QEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQER++ +T++YY+GA G +LVYD+T +QSF + WL E+ +A++N+V +L+GNK
Sbjct: 65 DTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL S R V +E+ +E A N+ F+ETSA ++NVE AF+T+ EI ++K S
Sbjct: 125 VDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKSSEAI-- 182
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G R I P Q QN+ GCC
Sbjct: 183 --------PVKTGPR-ITPDQQQNTVKDTGCC 205
>gi|145540567|ref|XP_001455973.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834247|emb|CAI44494.1| rab_C46 [Paramecium tetraurelia]
gi|124423782|emb|CAK88576.1| unnamed protein product [Paramecium tetraurelia]
Length = 227
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 12 IDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDT 71
I +VFK++L+G +AVGKSQ+L RF +++F++ S TIGVEF K L ID+K ++ Q+WDT
Sbjct: 10 IAHVFKIILLGSTAVGKSQILLRFTKDQFNLSSNTTIGVEFSAKVLEIDNKKIRVQVWDT 69
Query: 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD-KNIVIMLIGNKC 130
AGQE+YRA+ AYY+GAVGA LVYD+TK+ SF + RWL E+R ++D +N+V+MLIGNK
Sbjct: 70 AGQEKYRAIAKAYYKGAVGAFLVYDITKKNSFLEVDRWLQEIRDYSDQQNLVLMLIGNKN 129
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISK 182
DL + R V E+A ++AQ + + F+ETSA N+E AF + EI R IS+
Sbjct: 130 DLEAQRQVSKEEAIKYAQSKKMGFLETSAQTGHNIEFAFKQIAEEILRDISE 181
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 6/209 (2%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F + TIGVEF + + ID + VK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ RWL+E R +A+ +V+MLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDVTRRETFNHLTRWLEEARHNANTEMVVMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEHD 192
RAV T++ +FA R L FMETSA A NVE AF+ +IY I K ND H
Sbjct: 125 HRRAVSTKEGADFAARNGLIFMETSAKTARNVEGAFIQTAHKIYENIQKGVYDVTNDSHG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ ++ + VPG +A GCC
Sbjct: 185 IKVGAH--SSSAASVPGAASGTA---GCC 208
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 6/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID + +K QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDL 123
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
RAV E+ ++FA+ L F+E SA A NVE AF+ I + I + ++E
Sbjct: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSNE-- 181
Query: 193 VAGNSNLLKG-TRIIVPGQDQNSASKRGCC 221
+S + G R P D + + GCC
Sbjct: 182 ---SSGIKVGYGRPQGPSGDGTVSQRGGCC 208
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 142/213 (66%), Gaps = 5/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
N + DY+FK++LIG+S VGKS LL RF+ + ++ D +TIGV+F+ KT+ +D KTVK QI
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVDLDGKTVKLQI 61
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQER+R +TS+YYRG+ G ++VYD+T ++SF+ + WL E+ +A ++ +L+GN
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGN 121
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL R V + A+EFA + F+ETSAL++TNVE AFLT+ +I K S+
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFIETSALDSTNVEEAFLTMARQI-----KDSMAQQ 176
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + + + + GQ ++S GCC
Sbjct: 177 QRHDGGAANGQNENGNVNLKGQSLTNSSANGCC 209
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 124/177 (70%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++I +K +K QIWDTAG
Sbjct: 5 YLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIGNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDARQHANSNMTIMLIGNKCDLD 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
RAV TE+ +FA+ L FMETSA A NVE AF+ +IY+ I + ++E
Sbjct: 125 HRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQKIEEGIFDVSNE 181
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
S R V E+ + FA+ L FMETSA A NVE AF+ EIY I + N+E
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNE--- 181
Query: 194 AGNSNLLKGTRIIVP-------GQDQNSASKRGCC 221
+N +K + P G + S GCC
Sbjct: 182 ---ANGIKIGQQHSPTNPSLGSGNNPGGQSSSGCC 213
>gi|149212752|gb|ABR22619.1| GTP-binding protein [Lolium temulentum]
Length = 210
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 133/215 (61%), Gaps = 17/215 (7%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K ++ QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIELQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IML+GNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLS 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE--- 190
RAV E+ ++FA+ L FME SA A NVE F+ IY+ I ++E
Sbjct: 125 HRRAVSFEEGEQFAKENGLLFMEASAKTAHNVEEGFVKTAGAIYKKIQDGVFDVSNESFG 184
Query: 191 ----HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD +G S G+ P Q GCC
Sbjct: 185 IKVGHDTSGQSRGAGGS----PSQGG------GCC 209
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 139/212 (65%), Gaps = 11/212 (5%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q+ DY+FK++LIG+SAVGKS LL RFA N F+ TIGV+F+ +T ++ KTVK QIW
Sbjct: 5 QEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIW 64
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQER++ +T++YY+GA G +LVYD+T +QSF + WL E+ +A++N+V +L+GNK
Sbjct: 65 DTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGNK 124
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL S R V E+ +E A N+ F+ETSA ++NVE AF+T+ EI ++K S
Sbjct: 125 VDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKGSEAV-- 182
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ G R I P Q QN+ GCC
Sbjct: 183 --------PIKTGPR-ITPDQQQNTVKDTGCC 205
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 129/208 (62%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R +F+H+ WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
S R V E+ + FA+ L FMETSA A+NVE AF+ EIY I + N+E +
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
T + G + GCC
Sbjct: 185 IKIGPQHPTTNSTLSGSQGGQHAGGGCC 212
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 122/177 (68%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ WL++ R H+ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
S R V E+ + FA+ L FMETSA A+NVE AF+ EIYR I + N+E
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNE 181
>gi|297800396|ref|XP_002868082.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
gi|297313918|gb|EFH44341.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 18/213 (8%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y FK +LIGD+ VGKS LL +F F TIGVEF +K ++ID+ +K QIWDTAG
Sbjct: 5 YRFKYILIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGSKKITIDNIPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R+VT +YYRG G +LVYD+T+R++F+H+A WL+E R HA +N+ MLIGNKCDL
Sbjct: 65 QESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARRHASENMTTMLIGNKCDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I + DE +
Sbjct: 125 EKRAVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFIETAATIYKRIQDGVV---DEANE 181
Query: 194 AGNSNLLKGTRIIVPGQDQ-----NSASKRGCC 221
G I PG +S +RGCC
Sbjct: 182 PG----------ITPGPFDGYDAISSKQRRGCC 204
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VL+GD VGK+Q+ R+ +EF+ SK+TIGVEF KT++I+ +K QIWDT+
Sbjct: 4 DYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDTS 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
G+ERYRA+TSAYYRG+VGA+LV+D+TK +SF+ + W +LR +AD+NIV+ ++GNK DL
Sbjct: 64 GEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKIDL 123
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+ R V T +A+ FA+ F+METSAL+ T VE AF V +I+ I+ +
Sbjct: 124 PT-REVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSR 173
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 135/212 (63%), Gaps = 8/212 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK ++IGD+ VGKS LL +F F TIGVEF + +++D + +K QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTA 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCDL 123
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
RAV E+ Q+FA+ L F+E SA A NVE AF+ +I + I ++E
Sbjct: 124 AHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSNE-- 181
Query: 193 VAGNSNLLKG---TRIIVPGQDQNSASKRGCC 221
+S + G T+ G+D + GCC
Sbjct: 182 ---SSGIKIGYGRTQGAAGGRDGTISQGGGCC 210
>gi|312377320|gb|EFR24177.1| hypothetical protein AND_11405 [Anopheles darlingi]
Length = 1044
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 89/135 (65%), Positives = 112/135 (82%)
Query: 59 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHAD 118
+D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD
Sbjct: 6 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD 65
Query: 119 KNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR 178
+NIVIML+GNK DL LRAVPT++A+ FA+R L F+ETSAL++TNVETAF +LTEIYR
Sbjct: 66 QNIVIMLVGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYR 125
Query: 179 IISKKSLTANDEHDV 193
I+S+K + E V
Sbjct: 126 IVSQKQIRDPPEGSV 140
>gi|57547575|gb|AAW52512.1| small GTP-binding protein [Triticum aestivum]
Length = 210
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 134/211 (63%), Gaps = 10/211 (4%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IML+GNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLS 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
RAV E+ ++FA+ L FME SA A NVE F+ IY+ I DV
Sbjct: 125 HRRAVSFEEGEQFAKENGLIFMEASAKTAQNVEEGFVKTAGAIYKKIQDGVF------DV 178
Query: 194 AGNSNLLKGTRIIVPGQDQN---SASKRGCC 221
+ S +K VPGQ S+S+ G C
Sbjct: 179 SNESYGIK-VGYAVPGQAGGAGASSSQGGSC 208
>gi|356570243|ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
Length = 211
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 133/212 (62%), Gaps = 5/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID + +K QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWDTA 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQE +R++T +YYRGA GA+LVYD+T+R +F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHANPNMTIMLIGNKCDL 123
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL-TANDEH 191
RAV E+ ++FA+ L F+E SA A NVE AF+ +I + I + +N+
Sbjct: 124 SHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSNESF 183
Query: 192 DVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ +G PG + S RG C S
Sbjct: 184 GIKVGYGRPQGQ----PGARDGTVSARGGCCS 211
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 129/208 (62%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R +F+H+ WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
+ R V E+ + FA+ L FMETSA A NVE AF+ EIYR I + N+E +
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANG 184
Query: 194 AGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ PG + + CC
Sbjct: 185 IKLGPQHSPSSPNSPGGNPALSGSSNCC 212
>gi|73977362|ref|XP_532625.2| PREDICTED: ras-related protein Rab-2B isoform 1 [Canis lupus
familiaris]
Length = 216
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 135/218 (61%), Gaps = 16/218 (7%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ WL++ R H+ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
S R V E+ + FA+ L FMETSA A NVE AF+ EIYR I + DV
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLF------DV 178
Query: 194 AGNSNLLK-GTRIIVPGQDQNSASKR---------GCC 221
+N +K G + + SAS+R GCC
Sbjct: 179 HNEANGIKIGPQQCISASVGPSASQRSSNEIGSNSGCC 216
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 122/177 (68%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R +F+H+A WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
+ R V E+ + FA+ L FMETSA A NVE AF+ EIYR I + N+E
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNE 181
>gi|402587368|gb|EJW81303.1| hypothetical protein WUBG_07788 [Wuchereria bancrofti]
Length = 212
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 122/177 (68%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R +F+H+A WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
+ R V E+ + FA+ L FMETSA A NVE AF+ EIYR I + N+E
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNE 181
>gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena thermophila]
gi|89287343|gb|EAR85334.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777820|dbj|BAJ21306.1| Rab-family small GTPase Rab11I [Tetrahymena thermophila]
Length = 225
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 142/221 (64%), Gaps = 18/221 (8%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
++DY FK++LIGDS VGK+ ++ RF N+F+V+ K+TIGVE+ KT+ ID ++A IWD
Sbjct: 12 QLDYQFKILLIGDSGVGKTSIMNRFTENKFNVEIKSTIGVEYSKKTMVIDQAVIQASIWD 71
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAR-WLDELRGHADKNIVIMLIGNK 129
TAGQER+R++ YY+GA+GA+LV+D+T+ + +++ + WL E+ HA KNI ++LIGNK
Sbjct: 72 TAGQERFRSLAKNYYKGAIGALLVFDVTRPHTLENIQKIWLQEVEQHASKNIKMILIGNK 131
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIIS-------K 182
DL R V E+A F++ NL +METSAL N++ AF T++ EIY I+
Sbjct: 132 SDLTVERIVKQEEAVNFSKTNNLAYMETSALNNQNIDQAFETLVREIYSEINSLPSEIRP 191
Query: 183 KSLTANDEH--DVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
K+LT EH V N+NL + N KR CC
Sbjct: 192 KNLTQRKEHTPQVNQNNNLQIDKK--------NIKKKRACC 224
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus anophagefferens]
Length = 210
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 127/177 (71%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F + TIGVEF + ++ID + +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAIDERQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ RWL+E R +++ N+V+MLIGNK DLG
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMVVMLIGNKSDLG 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
RAV T++ +EFA++ L FMETSA ++NVE AF+ + I+ I+ +E
Sbjct: 125 HRRAVSTDEGEEFARKNGLVFMETSAKTSSNVERAFIDTASTIHENITAGVFDVTNE 181
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 131/209 (62%), Gaps = 4/209 (1%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ WL++ R H++ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-HD 192
S R V E+ + FA+ L FMETSA A NVE AF+ EIY+ I + N+E +
Sbjct: 125 SRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINNEANG 184
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ VP + S GCC
Sbjct: 185 IKLGPQNPSNPSTSVPDRPPQSG---GCC 210
>gi|431898744|gb|ELK07121.1| Ras-related protein Rab-2B [Pteropus alecto]
Length = 216
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 136/218 (62%), Gaps = 16/218 (7%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++F+H+ WL++ R H+ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDV 193
S R V E+ + FA+ L FMETSA A NVE AF+ EIYR I + DV
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLF------DV 178
Query: 194 AGNSNLLK-GTRIIVPGQDQNSASKR---------GCC 221
+N +K G + + +SAS+R GCC
Sbjct: 179 HNEANGIKIGPQQCISTSVGSSASQRNSGDVESNSGCC 216
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 10/213 (4%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK ++IGD+ VGKS LL +F F TIGVEF + ++ID + +K QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWDTA 63
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQE +R++T +YYRGA GA+LVYD+T+R++F+H+A WL++ R HA+ N+ IMLIGNKCDL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDL 123
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
RAV E+ ++FA+ L F+E SA A NVE AF+ +I + I + ++E
Sbjct: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSNESS 183
Query: 193 VA----GNSNLLKGTRIIVPGQDQNSASKRGCC 221
G G+R D A + GCC
Sbjct: 184 GIKVGYGRPQGPSGSR------DGAVAQRGGCC 210
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 132/217 (60%), Gaps = 16/217 (7%)
Query: 14 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAG 73
Y+FK ++IGD+ VGKS LL +F F TIGVEF + ++I+ K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDTAG 64
Query: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG 133
QE +R++T +YYRGA GA+LVYD+T+R++FDH+ WL++ R H+ N+VIMLIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFDHLTTWLEDARQHSSSNMVIMLIGNKSDLD 124
Query: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE--- 190
+ R V +E+ FA+ L FMETSA A NVE AF+ EIY I N+E
Sbjct: 125 AKREVKSEEGLAFAKEHGLVFMETSAKTAANVEEAFINTAKEIYTKIQDGVFDVNNEANG 184
Query: 191 ------HDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
H G + GT PG+ Q S GCC
Sbjct: 185 IKLGPQHQTGG--TVRPGT--TEPGKPQGSG---GCC 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,023,113,783
Number of Sequences: 23463169
Number of extensions: 105110395
Number of successful extensions: 373920
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16116
Number of HSP's successfully gapped in prelim test: 8495
Number of HSP's that attempted gapping in prelim test: 339342
Number of HSP's gapped (non-prelim): 25551
length of query: 224
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 87
effective length of database: 9,144,741,214
effective search space: 795592485618
effective search space used: 795592485618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)