BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027382
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/221 (90%), Positives = 211/221 (95%), Gaps = 2/221 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARFARNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WL+ELRGHADKN
Sbjct: 61 NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLT+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
SKKSLTA+D+ D GNS+LLKGTRII+P + Q S + GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSE-QESGKRGGCC 219
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/219 (82%), Positives = 203/219 (92%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YG+ QKIDYVFKVVLIGDSAVGKSQLLARFARNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIM
Sbjct: 68 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DLG+LR VPTEDA+EFA+RENLFFMETSALE+TNVE AF+TVLTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
L AN+E D +GNS+LLKGT+I+VPGQ+ +K CC+S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/224 (79%), Positives = 204/224 (91%), Gaps = 1/224 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
MS ++NQKIDYVFKVVLIGDSAVGKSQLLARF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1 MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKN
Sbjct: 61 RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DLG+LRAVPTEDA+EFAQRENLFFMETSAL++ NVE +FLTVLTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
SKK+L AN+E + G+S+LL+GT+I+V G++ S K GCC +S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGK-GCCGTS 223
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 351 bits (901), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 192/221 (86%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD N KIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSK+TIGVEFQT+TL IDHKTV
Sbjct: 7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNKCDL + R VPTEDA+EFA++E LFF+ETSALEATNVE+AF TVLTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186
Query: 185 LTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
L A DE GNS L G +II+PG Q +KR CC +S
Sbjct: 187 LAA-DESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 349 bits (895), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/223 (74%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL+I
Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQ 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD+N
Sbjct: 61 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIMLIGNK DL RAVPTEDA+EFAQ+E LFF+ETSA+EATN+E AFLTVLTEI+ I+
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+KK+L A+D GN L G +I+VPG Q K+ CC S
Sbjct: 181 NKKNLAADDNQS-NGNPASLTGKKILVPGPGQVIPEKKACCSS 222
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 341 bits (874), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 163/223 (73%), Positives = 189/223 (84%), Gaps = 1/223 (0%)
Query: 1 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60
M++ YGD +QKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TL I
Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60
Query: 61 HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120
HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD+N
Sbjct: 61 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120
Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180
IVIML GNK DL RAVPTEDA+EFAQ+E LFF+ETSA+EAT +E AFLTVLTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180
Query: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+KK+L A DE+ N L G +I+VPG Q K+ CC S
Sbjct: 181 NKKNLAA-DENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 330 bits (847), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 189/221 (85%), Gaps = 2/221 (0%)
Query: 5 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTV 64
YGD +QKIDYVFKVVLIGDSAVGKSQ+LAR+AR+EFS+DSKATIGVEFQT+TL IDHK+V
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIM 124
KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWL+ELR HADKNIVI+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126
Query: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKS 184
LIGNK DL RA+PTEDA+EFA++E LFF+ETSA ATNVE+AF TVLTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186
Query: 185 LTANDEHDVAGNSNLLKGTRI-IVPGQDQNSASKRGCCLSS 224
L A+++ + GN L G +I IVPG Q +K C +S
Sbjct: 187 LAASEDQE-NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 316 bits (809), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 182/215 (84%), Gaps = 4/215 (1%)
Query: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWD 70
K+DYVFKVVLIGDSAVGKSQLLARFAR+EFS+DSKATIGVEFQT+TLSI+ K++KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKC 130
TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWL+ELR HADKNIVI+LIGNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE 190
DL RAVPTEDA+EFA++E LFF+ETSAL ATNVE +F T++T+IY ++KK+L + +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192
Query: 191 HDVAGNSNLLKGTRIIVPGQDQNSASKRG-CCLSS 224
+ G+ L G +I++PG Q +K CC SS
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTSS 224
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 282 bits (721), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 175/216 (81%), Gaps = 4/216 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDAQ +A++E L F+ETSALEA NVE AF T+L+E+YRIISKKS++++
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224
N+N+ +G I V +++A K+ CC SS
Sbjct: 186 ---QTTANANIKEGQTIDVAATSESNA-KKPCCSSS 217
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 280 bits (717), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 170/213 (79%), Gaps = 3/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TKTL++D K VKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D NIV+MLIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL L AVPTED + FA+RE+L+FMETSALEATNVE AF VLT+IYRI+SK+++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
D +G + KG I V +D + + GCC
Sbjct: 187 DSGSSSGLPS--KGQTINVK-EDSSVLKRFGCC 216
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 276 bits (707), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL GDS VGKS LL+RF RN+FS DS+ATIGVEF T+++ D K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ TE+A+ FA+REN FFMETSALEA NV+ AF VLT+IYR++SKK+L A D+
Sbjct: 131 RHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPT 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L KG I V G+D SA K+ GCC
Sbjct: 191 TA----LPKGQMINVGGRDDISAVKKPGCC 216
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 275 bits (704), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
D+++KVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H + NIVIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALEA NVE AF VL++IYR+ SKK+L D+H
Sbjct: 131 RHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDH- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
+ L KG I V +D S K+ GCC S
Sbjct: 190 ----TTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 168/209 (80%), Gaps = 5/209 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEF+++SK+TIGVEF T+TL +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL EL+ H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AVPTED + +A++E+L FMETSALEATNVE AF VLT+IYRI SKK + A ++
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
GN+++ KG +I V D ++ K GCC
Sbjct: 189 --GNASVPKGEKIEVK-NDVSALKKLGCC 214
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 167/214 (78%), Gaps = 8/214 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV ED Q A++E L F+ETSALEA N+E AF T+LTEIY IISKK+L A
Sbjct: 126 KSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
+ +SNL +GT I V D ++ +R CC
Sbjct: 186 E-----ASSNLPGQGTTINVA--DASANQRRSCC 212
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 167/213 (78%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D +++E L F+ETSALEATN+E AF T+LTEIY I+SKK+L A
Sbjct: 126 KSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AG S +GT I V D + +K+GCC
Sbjct: 186 EA--TAGASVPGQGTTINVA--DTSGNTKKGCC 214
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 275 bits (702), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 164/210 (78%), Gaps = 5/210 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVL GDS VGKS LL+RF RN+FS DS++TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 11 DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D N VIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRA+ TE+ ++FA+REN FFMETSALEA NVE AF VLT+IYR++SKK+L A D+
Sbjct: 131 NHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPT 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
A L KG I V +D SA K+ GCC
Sbjct: 191 TA----LPKGQMINVGSRDDVSAVKKSGCC 216
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 275 bits (702), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 167/214 (78%), Gaps = 6/214 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K VKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIVIM +GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VL++IYR++S+K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
D+ + L KG I V +D SA K+ GCC
Sbjct: 187 DDP-----AALPKGQTINVGSKDDVSAVKKVGCC 215
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 274 bits (701), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 167/213 (78%), Gaps = 6/213 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+F+++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V ED + A++E L F+ETSALEATN+E AF T+L+EIY IISKK+L A
Sbjct: 126 KSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAA- 184
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ AGN L G + D ++ +++GCC
Sbjct: 185 --QEAAGN---LPGQGTAINISDSSATNRKGCC 212
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 274 bits (700), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G+ + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KMQCC 213
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 273 bits (699), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 166/211 (78%), Gaps = 5/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF+RNEF+++SK+TIGVEF T+++ +D K VKAQIWDTA
Sbjct: 12 DYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D+NIVIML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAV TEDA+ FA+REN FFMETSALE+ NVE AF VLTEIY+++ +K+L D+
Sbjct: 132 RHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDP- 190
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ L KG I V D ++ K GCC S
Sbjct: 191 ----AALPKGQTINVGKDDVSAVKKVGCCSS 217
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ HD + +N++ + + P D ++K CC
Sbjct: 182 SDRSAHDESPGNNVVDIS--VPPTTDGQKSNKLQCC 215
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 169/211 (80%), Gaps = 8/211 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D K +KAQ+WDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D N+VIML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LRAVPTE+A+ F++REN+FFMETSAL+ATNVE AF VLT+IYR++S+K+L D
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKAL------D 184
Query: 193 VAGNS-NLLKGTRIIVPGQDQNSASK-RGCC 221
G+ +L KG I + +D +A K GCC
Sbjct: 185 GTGDPMSLPKGQTIDIGNKDDVTAVKSSGCC 215
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 271 bits (694), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
HD + +N++ + + P D +K CC S
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQRPNKLQCCQS 217
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 271 bits (693), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 6/211 (2%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTA
Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTA 71
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDL 131
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV T++ + FA+RE+L+FMETSALE+TNVE AF VLT+IYRI+SK+S+ A D+
Sbjct: 132 RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD-- 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
S KG +I + +D SA K+G C S
Sbjct: 190 --AGSGPGKGEKINI--KDDVSAVKKGGCCS 216
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE AF +LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
HD + +N++ + + P D +K CC
Sbjct: 182 ADRAAHDESPGNNVVDIS--VPPTTDGQKPNKLQCC 215
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 271 bits (692), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 121
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSL 185
+GNK DL LRAVPT++A+ FA++ L F+ETSAL+ TNVE AF T+LTEIYRI+S+K +
Sbjct: 122 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM 181
Query: 186 TANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ E+D++ ++N++ I VP +N K CC
Sbjct: 182 SDRRENDMSPSNNVVP---IHVPPTTENKP-KVQCC 213
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 270 bits (689), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 168/214 (78%), Gaps = 7/214 (3%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+++ DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TKT ++ K VKAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+L+YD+T+ +F++ ARWL ELRGH D NIV+MLIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
KCDL L AV TE+A+ FA+RE+L+FMETSAL+ATNVE AF VLT+I++I+SK+S+
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSV--- 183
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCC 221
D G S L G + ++ S KR GCC
Sbjct: 184 ---DGGGESADLPGKGETINVKEDGSVLKRMGCC 214
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF +NEFS++SK+TIGVEF T++L++D K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ WL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TEDA+ FA++E+L+FMETSALEATNVE AF VLT+I+ I+SKK++ A E
Sbjct: 131 RHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASE-- 188
Query: 193 VAGNSNLL-KGTRIIVPGQDQNSASKRGCC 221
++N+ KG +I + G+D ++ K GCC
Sbjct: 189 ---SANVPSKGDKIDI-GKDVSAVKKGGCC 214
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 270 bits (689), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 164/212 (77%), Gaps = 3/212 (1%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
Q DY+FK+VLIGDS VGK+ +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQIW
Sbjct: 7 QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LR+V ED Q A+ E L F+ETSALEATNVE AF TVL EIY IISKK+L A
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQ- 185
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ A ++ + G + +D + A KRGCC
Sbjct: 186 --EAAAANSAIPGQGTTINVEDTSGAGKRGCC 215
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 172/216 (79%), Gaps = 5/216 (2%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TK+L+ID+K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQI 66
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +++++ RWL ELR H D NIV+MLIGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGN 126
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL L AV T++A+ A+RE L+FMETSALEATNVE AF LT+IYRI+SKK++ A
Sbjct: 127 KSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAG 186
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKR-GCCLS 223
DE A +S KG I + +D+ S+ K+ GCC S
Sbjct: 187 DEG--ATSSAPPKGETINI--KDEGSSWKKFGCCSS 218
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 267 bits (683), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 167/209 (79%), Gaps = 7/209 (3%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L+++ K +KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L AV TEDA+ FA+ E+L+FMETSALE+TNVE AF VLT+IY ++SKK++ A ++
Sbjct: 131 RHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED-- 188
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+GN KG +I V D ++ K GCC
Sbjct: 189 -SGNVP-SKGEKIDV---DVSAVKKTGCC 212
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 266 bits (681), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 157/209 (75%), Gaps = 3/209 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+TK +F+++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
LR V TE AQ F +RE L F+ETSALE+TNVE AF +LTEIY I+SKK L + D
Sbjct: 130 KHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
G + +I D K GCC
Sbjct: 190 KIGEG---RDVIVIDNAHDDGGKKKGGCC 215
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 165/215 (76%), Gaps = 3/215 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+Q+ DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+T ++ KT+KAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LR+V ED Q A++E L F+ETSALEATNVE AF T+L EIY IISKK+L A
Sbjct: 126 KSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+ A ++ + G + D + +KR CC S
Sbjct: 186 ---EAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 154/187 (82%), Gaps = 2/187 (1%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK VLIGDS VGKS LL RF RNEF+++SK+TIGVEF T+ + +D+K +KAQIWDTA
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA++VYD+TK+ SFD++ RWL ELR HAD NIVIML+GNK DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDL 127
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDE-- 190
LRAV TE+AQ FA NL F+ETSA++A+NVE AF TVLTEI+RI+S +SL A D+
Sbjct: 128 LHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGV 187
Query: 191 HDVAGNS 197
H AG +
Sbjct: 188 HPTAGQT 194
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 155/200 (77%), Gaps = 11/200 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID K +KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTA 70
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+ RWL ELR H D NIV+MLIGNK DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDL 130
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
L V TED + FA++E+L+FMETSALEATNVE AF VLT+IYRI+SK+++ A D
Sbjct: 131 RHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPS 190
Query: 193 VAGNSNLLKGTRIIVPGQDQ 212
+ +VP Q Q
Sbjct: 191 TS-----------VVPSQGQ 199
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 166/222 (74%), Gaps = 5/222 (2%)
Query: 4 LYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKT 63
Y + ++ DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 3 FYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Query: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVI 123
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+F + RWL+EL H+D N+V
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVT 122
Query: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+L+GNK DL LR V T + + A+ + LFFMETSAL+++NV AF TV+ EIY I+S+K
Sbjct: 123 ILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
Query: 184 SLTAND--EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLS 223
+++ + + D A SN G ++++P Q K GCC S
Sbjct: 183 VMSSQELNKQDPASLSN---GKKVVIPSDGQGEFKKGGCCSS 221
>sp|Q9LNK1|RABA3_ARATH Ras-related protein RABA3 OS=Arabidopsis thaliana GN=RABA3 PE=2
SV=1
Length = 237
Score = 256 bits (654), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 161/206 (78%), Gaps = 9/206 (4%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
+KIDYVFKVV+IGDSAVGK+QLL+RF NEF DSK+TIGVEFQT+T+++ K VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIW 82
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRAVTSAYYRGA+GAM+VYD+TKR SFDH+ARW++ELR HAD + VIML+GNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 130 CDLG-SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYR--IISKKSLT 186
DL RAVPTEDA EFA+ + LFF E SAL NV+ AF +L EI+ ++S+K++
Sbjct: 143 ADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAME 202
Query: 187 ANDEHDVAGNSNLLKGTRI-IVPGQD 211
++ G + L G+RI ++ G D
Sbjct: 203 SD-----GGATVKLDGSRIDVISGSD 223
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 256 bits (653), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 160/213 (75%), Gaps = 4/213 (1%)
Query: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQI 68
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGN 128
WDTAGQERYRA+TSAYYRGAVGA+L YD+TKRQ+FD++ RWL ELR H D NIVI+L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGN 125
Query: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAN 188
K DL LRAV +D Q ++E L F+ETSALEA NV+ AF T+LT+IY IISKK+L A
Sbjct: 126 KSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQ 185
Query: 189 DEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
A S L G + D ++ KRGCC
Sbjct: 186 ----EAAASTALPGQGTTINVSDNSANVKRGCC 214
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 253 bits (646), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 149/178 (83%)
Query: 6 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVK 65
G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L ++ KT+K
Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIK 62
Query: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIML 125
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQSFD++ RWL ELR HAD +IVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMM 122
Query: 126 IGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKK 183
+GNK DL LRAV ++ + A++E LFF+ETSA+EA NVE AF T++TE+Y I+++K
Sbjct: 123 VGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 162/212 (76%), Gaps = 5/212 (2%)
Query: 10 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIW 69
++ DY++K+VLIGDS VGKS LL+RF RNEFS+++K+TIGVEF T+T+ + KT+KAQ+W
Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 67
Query: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNK 129
DTAGQERYRA+TSAYYRGAVGA+LVYD+ K+ ++ + RW+ ELR +AD+NI IML+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNK 127
Query: 130 CDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTAND 189
DL LR V T++A+EF+++ L F+ETSAL+++NVE AF +LT+IY I+S+ S +
Sbjct: 128 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTGP 187
Query: 190 EHDVAGNSNLLKGTRIIVPGQDQNSASKRGCC 221
+ + N+ II+P + A+K GCC
Sbjct: 188 QTTIDSNTET-----IILPTTSEPPAAKSGCC 214
>sp|P19892|RAA5E_ARATH Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2
SV=1
Length = 218
Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 165/216 (76%), Gaps = 11/216 (5%)
Query: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTA 72
+Y+FK+V+IGDSAVGKS LL+R+ARNEFS +SKATIGVEFQT+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDL 132
GQER+RAVTSAYYRGAVGA++VYD+T+R +F+ + RWLDEL+ H+D + ML+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHD 192
++RAV E+ + A+ E LFF+ETSAL++TNV+TAF V+ +IY +S+K L ++ D
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 193 VAGNSNLLKGTRIIVPGQDQNSASKR----GCCLSS 224
L R+ + +D NSASK+ CC S+
Sbjct: 190 E------LTVNRVSLV-KDDNSASKQSSGFSCCSST 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,961,573
Number of Sequences: 539616
Number of extensions: 2519833
Number of successful extensions: 11471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 9687
Number of HSP's gapped (non-prelim): 1201
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)