Query 027383
Match_columns 224
No_of_seqs 140 out of 1003
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 09:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027383.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027383hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 99.9 4.8E-25 1E-29 197.5 4.1 102 104-223 82-185 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 99.9 5.7E-24 1.2E-28 176.2 9.3 95 111-223 1-96 (162)
3 TIGR02250 FCP1_euk FCP1-like p 99.9 1.2E-22 2.7E-27 168.4 9.8 103 108-223 3-113 (156)
4 PF03031 NIF: NLI interacting 99.9 1.2E-21 2.6E-26 158.7 8.3 88 112-222 1-89 (159)
5 TIGR02245 HAD_IIID1 HAD-superf 99.8 7.1E-20 1.5E-24 157.9 8.9 82 106-222 16-99 (195)
6 smart00577 CPDc catalytic doma 99.7 1.4E-16 3E-21 129.4 9.1 98 110-223 1-99 (148)
7 KOG0323 TFIIF-interacting CTD 99.6 5.2E-16 1.1E-20 153.0 6.6 107 110-220 145-253 (635)
8 KOG2832 TFIIF-interacting CTD 99.5 1.4E-14 2.9E-19 135.1 7.5 85 104-222 182-266 (393)
9 COG5190 FCP1 TFIIF-interacting 99.5 1.2E-14 2.7E-19 136.7 5.5 99 106-223 207-305 (390)
10 COG5190 FCP1 TFIIF-interacting 98.2 6.3E-07 1.4E-11 85.0 2.4 103 105-216 20-123 (390)
11 TIGR01684 viral_ppase viral ph 97.9 3.4E-05 7.4E-10 71.1 7.9 74 108-221 123-198 (301)
12 PHA03398 viral phosphatase sup 97.9 3.6E-05 7.8E-10 71.0 7.7 75 108-222 125-201 (303)
13 cd01427 HAD_like Haloacid deha 97.8 7.2E-05 1.6E-09 55.6 5.9 48 169-216 23-71 (139)
14 PF05152 DUF705: Protein of un 97.3 0.00085 1.8E-08 61.8 7.7 49 173-221 145-194 (297)
15 TIGR01662 HAD-SF-IIIA HAD-supe 96.9 0.0039 8.5E-08 48.6 7.2 41 169-209 24-73 (132)
16 TIGR01685 MDP-1 magnesium-depe 96.8 0.0034 7.4E-08 53.4 6.7 52 168-219 43-105 (174)
17 TIGR01681 HAD-SF-IIIC HAD-supe 96.8 0.0014 3.1E-08 52.1 4.1 38 170-207 29-68 (128)
18 TIGR01656 Histidinol-ppas hist 96.7 0.0078 1.7E-07 48.5 7.2 40 169-208 26-81 (147)
19 TIGR01672 AphA HAD superfamily 96.5 0.0046 1E-07 55.0 5.1 48 172-219 116-168 (237)
20 TIGR01533 lipo_e_P4 5'-nucleot 96.3 0.016 3.6E-07 52.5 8.0 52 169-220 117-173 (266)
21 PRK08238 hypothetical protein; 96.2 0.0084 1.8E-07 58.3 5.9 47 169-218 71-118 (479)
22 TIGR01689 EcbF-BcbF capsule bi 96.1 0.013 2.8E-07 47.7 5.7 48 171-218 25-86 (126)
23 TIGR00213 GmhB_yaeD D,D-heptos 95.9 0.069 1.5E-06 44.1 9.2 28 169-196 25-53 (176)
24 PRK08942 D,D-heptose 1,7-bisph 95.9 0.066 1.4E-06 44.2 9.0 28 169-196 28-56 (181)
25 COG4996 Predicted phosphatase 95.7 0.047 1E-06 46.0 7.1 88 113-219 2-91 (164)
26 PRK11009 aphA acid phosphatase 95.6 0.032 6.8E-07 49.7 6.4 51 169-219 113-170 (237)
27 TIGR01664 DNA-3'-Pase DNA 3'-p 95.5 0.086 1.9E-06 43.9 8.3 38 171-208 43-93 (166)
28 TIGR01686 FkbH FkbH-like domai 95.5 0.023 5E-07 51.7 5.2 65 110-205 2-67 (320)
29 PF12689 Acid_PPase: Acid Phos 95.3 0.084 1.8E-06 44.9 7.7 42 168-209 43-86 (169)
30 TIGR01261 hisB_Nterm histidino 95.2 0.15 3.2E-06 42.4 8.6 47 169-217 28-90 (161)
31 PHA02530 pseT polynucleotide k 94.6 0.069 1.5E-06 47.2 5.5 50 170-219 187-238 (300)
32 PRK11133 serB phosphoserine ph 94.5 0.032 7E-07 51.6 3.4 45 169-213 180-225 (322)
33 TIGR01663 PNK-3'Pase polynucle 94.4 0.21 4.6E-06 49.4 8.9 81 108-220 165-258 (526)
34 PRK05446 imidazole glycerol-ph 94.1 0.22 4.8E-06 46.9 7.9 54 110-194 1-55 (354)
35 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.9 0.17 3.8E-06 43.8 6.5 15 111-125 8-22 (242)
36 PF13419 HAD_2: Haloacid dehal 93.9 0.12 2.7E-06 40.1 5.0 55 167-221 74-129 (176)
37 TIGR01668 YqeG_hyp_ppase HAD s 93.9 0.14 3.1E-06 42.4 5.6 37 172-208 45-83 (170)
38 PF08645 PNK3P: Polynucleotide 93.6 0.14 3E-06 42.6 5.1 26 169-194 28-54 (159)
39 TIGR02253 CTE7 HAD superfamily 93.5 0.12 2.6E-06 43.2 4.5 54 168-221 92-146 (221)
40 PF13344 Hydrolase_6: Haloacid 92.6 0.3 6.6E-06 37.5 5.3 30 173-202 17-51 (101)
41 PRK00192 mannosyl-3-phosphogly 92.4 0.31 6.7E-06 42.9 5.8 15 111-125 4-18 (273)
42 PRK13582 thrH phosphoserine ph 92.3 0.21 4.5E-06 41.3 4.3 47 169-215 67-113 (205)
43 TIGR02137 HSK-PSP phosphoserin 92.1 0.24 5.3E-06 42.6 4.6 48 169-216 67-114 (203)
44 TIGR01670 YrbI-phosphatas 3-de 92.0 0.58 1.2E-05 38.2 6.5 42 169-212 29-71 (154)
45 TIGR01488 HAD-SF-IB Haloacid D 91.8 0.33 7.2E-06 38.9 4.8 48 169-216 72-120 (177)
46 TIGR01449 PGP_bact 2-phosphogl 91.7 0.37 8.1E-06 39.9 5.2 53 168-220 83-136 (213)
47 PF08282 Hydrolase_3: haloacid 91.6 0.47 1E-05 39.1 5.7 13 114-126 1-13 (254)
48 TIGR01491 HAD-SF-IB-PSPlk HAD- 91.6 0.41 8.9E-06 39.1 5.3 47 169-215 79-126 (201)
49 TIGR03333 salvage_mtnX 2-hydro 91.3 0.36 7.9E-06 41.0 4.8 42 168-209 68-110 (214)
50 TIGR02254 YjjG/YfnB HAD superf 91.2 0.42 9.1E-06 39.7 5.1 53 169-221 96-148 (224)
51 PRK13288 pyrophosphatase PpaX; 90.9 0.63 1.4E-05 39.0 5.9 54 168-221 80-134 (214)
52 TIGR01428 HAD_type_II 2-haloal 90.7 0.43 9.4E-06 39.4 4.7 52 169-220 91-143 (198)
53 PRK09449 dUMP phosphatase; Pro 90.6 0.38 8.3E-06 40.4 4.3 53 169-221 94-146 (224)
54 PRK13222 phosphoglycolate phos 90.6 0.65 1.4E-05 38.7 5.7 52 169-220 92-144 (226)
55 TIGR01456 CECR5 HAD-superfamil 90.6 0.47 1E-05 43.4 5.2 15 112-126 1-15 (321)
56 COG0561 Cof Predicted hydrolas 90.4 0.72 1.6E-05 40.0 6.0 17 110-126 2-18 (264)
57 KOG3109 Haloacid dehalogenase- 90.4 0.5 1.1E-05 42.7 5.0 48 169-217 99-146 (244)
58 PLN03243 haloacid dehalogenase 90.4 0.53 1.2E-05 41.9 5.2 53 169-221 108-161 (260)
59 TIGR01454 AHBA_synth_RP 3-amin 90.1 0.67 1.4E-05 38.6 5.3 54 168-221 73-127 (205)
60 PLN02770 haloacid dehalogenase 90.0 0.63 1.4E-05 40.6 5.3 53 169-221 107-160 (248)
61 PRK09552 mtnX 2-hydroxy-3-keto 90.0 0.44 9.5E-06 40.5 4.2 38 169-206 73-111 (219)
62 TIGR01487 SPP-like sucrose-pho 89.8 0.86 1.9E-05 38.4 5.8 14 112-125 2-15 (215)
63 TIGR00338 serB phosphoserine p 89.8 0.7 1.5E-05 38.7 5.2 47 169-215 84-131 (219)
64 TIGR02463 MPGP_rel mannosyl-3- 89.7 0.83 1.8E-05 38.5 5.6 13 114-126 2-14 (221)
65 TIGR01509 HAD-SF-IA-v3 haloaci 89.6 0.78 1.7E-05 36.6 5.2 51 169-220 84-135 (183)
66 COG2503 Predicted secreted aci 89.4 0.27 5.9E-06 44.9 2.6 38 170-207 122-161 (274)
67 TIGR02461 osmo_MPG_phos mannos 89.3 0.74 1.6E-05 40.0 5.1 12 114-125 2-13 (225)
68 PRK03669 mannosyl-3-phosphogly 89.1 0.89 1.9E-05 40.0 5.6 18 109-126 5-22 (271)
69 TIGR01544 HAD-SF-IE haloacid d 88.9 0.66 1.4E-05 42.5 4.7 49 168-216 119-172 (277)
70 TIGR01484 HAD-SF-IIB HAD-super 88.3 1 2.3E-05 37.3 5.2 12 114-125 2-13 (204)
71 PRK10513 sugar phosphate phosp 88.1 1.8 3.8E-05 37.5 6.7 16 111-126 3-18 (270)
72 TIGR01486 HAD-SF-IIB-MPGP mann 87.7 0.98 2.1E-05 39.2 4.9 13 114-126 2-14 (256)
73 TIGR01458 HAD-SF-IIA-hyp3 HAD- 87.6 1.5 3.2E-05 38.8 6.0 15 112-126 2-16 (257)
74 COG2179 Predicted hydrolase of 87.4 1.6 3.5E-05 37.8 5.9 20 106-125 23-42 (175)
75 TIGR01993 Pyr-5-nucltdase pyri 87.3 0.59 1.3E-05 38.2 3.1 50 169-220 83-132 (184)
76 PRK10444 UMP phosphatase; Prov 87.2 1.6 3.4E-05 38.7 5.9 15 112-126 2-16 (248)
77 PLN02645 phosphoglycolate phos 87.1 1.4 3E-05 40.1 5.6 15 111-125 28-42 (311)
78 TIGR01489 DKMTPPase-SF 2,3-dik 87.0 1.2 2.5E-05 35.9 4.7 48 169-216 71-119 (188)
79 TIGR00099 Cof-subfamily Cof su 86.8 1.5 3.2E-05 37.9 5.4 12 114-125 2-13 (256)
80 TIGR01675 plant-AP plant acid 86.7 1.8 4E-05 38.6 6.1 49 171-219 121-172 (229)
81 PRK10826 2-deoxyglucose-6-phos 86.7 1.4 3E-05 37.2 5.1 52 169-220 91-143 (222)
82 PRK09484 3-deoxy-D-manno-octul 86.6 2.6 5.6E-05 35.3 6.7 29 184-212 63-91 (183)
83 PRK10530 pyridoxal phosphate ( 86.0 2.6 5.6E-05 36.3 6.5 16 111-126 3-18 (272)
84 PRK06769 hypothetical protein; 85.5 1.5 3.2E-05 36.4 4.7 27 170-196 28-55 (173)
85 PRK01158 phosphoglycolate phos 85.4 2.4 5.2E-05 35.6 5.9 16 111-126 3-18 (230)
86 TIGR03351 PhnX-like phosphonat 85.1 1.9 4.1E-05 36.1 5.2 51 169-219 86-139 (220)
87 TIGR02009 PGMB-YQAB-SF beta-ph 85.0 1.2 2.6E-05 35.9 3.8 50 169-220 87-137 (185)
88 TIGR01490 HAD-SF-IB-hyp1 HAD-s 84.9 1.4 2.9E-05 36.4 4.1 48 169-216 86-134 (202)
89 TIGR01422 phosphonatase phosph 84.8 2.2 4.8E-05 36.8 5.6 53 169-221 98-152 (253)
90 PRK13226 phosphoglycolate phos 83.9 2.9 6.2E-05 35.8 5.8 54 168-221 93-147 (229)
91 PLN02954 phosphoserine phospha 83.9 2.4 5.2E-05 35.5 5.3 46 169-214 83-131 (224)
92 PRK14502 bifunctional mannosyl 83.9 3.4 7.3E-05 42.6 7.1 31 96-126 401-431 (694)
93 PHA02597 30.2 hypothetical pro 83.7 0.65 1.4E-05 38.4 1.7 52 169-220 73-128 (197)
94 PRK15126 thiamin pyrimidine py 83.6 2.8 6.1E-05 36.5 5.7 15 112-126 3-17 (272)
95 PRK06698 bifunctional 5'-methy 83.5 1.8 4E-05 41.3 4.9 52 169-220 329-381 (459)
96 PRK10725 fructose-1-P/6-phosph 83.4 0.71 1.5E-05 37.5 1.8 51 170-221 88-138 (188)
97 PRK13223 phosphoglycolate phos 83.0 2.4 5.3E-05 37.7 5.2 53 169-221 100-153 (272)
98 TIGR01452 PGP_euk phosphoglyco 82.9 3 6.6E-05 37.0 5.7 14 112-125 3-16 (279)
99 smart00775 LNS2 LNS2 domain. T 82.6 2.7 5.8E-05 34.8 4.9 28 172-199 29-57 (157)
100 TIGR01549 HAD-SF-IA-v1 haloaci 82.6 3 6.6E-05 32.8 5.1 52 169-221 63-115 (154)
101 PLN02575 haloacid dehalogenase 82.4 2.4 5.2E-05 40.6 5.1 54 169-222 215-269 (381)
102 COG0560 SerB Phosphoserine pho 82.4 2.4 5.3E-05 36.8 4.8 51 169-219 76-127 (212)
103 PRK11587 putative phosphatase; 82.3 0.75 1.6E-05 38.9 1.6 51 168-219 81-132 (218)
104 PRK13288 pyrophosphatase PpaX; 81.1 0.91 2E-05 38.0 1.7 16 111-126 3-18 (214)
105 PRK11590 hypothetical protein; 81.0 0.96 2.1E-05 38.5 1.8 39 169-207 94-134 (211)
106 TIGR02253 CTE7 HAD superfamily 80.8 0.94 2E-05 37.8 1.6 16 112-127 3-18 (221)
107 PF09419 PGP_phosphatase: Mito 80.8 4.1 8.9E-05 34.8 5.5 21 106-126 36-56 (168)
108 PRK13225 phosphoglycolate phos 80.7 0.77 1.7E-05 41.2 1.2 49 169-217 141-190 (273)
109 PRK10976 putative hydrolase; P 80.7 4.2 9.2E-05 35.2 5.7 15 112-126 3-17 (266)
110 TIGR01548 HAD-SF-IA-hyp1 haloa 80.6 0.89 1.9E-05 37.8 1.4 50 171-220 107-157 (197)
111 TIGR01482 SPP-subfamily Sucros 80.5 3.4 7.4E-05 34.5 4.9 13 114-126 1-13 (225)
112 TIGR01993 Pyr-5-nucltdase pyri 80.4 0.94 2E-05 37.0 1.5 14 113-126 2-15 (184)
113 COG4359 Uncharacterized conser 80.0 2.4 5.1E-05 37.7 3.9 39 169-207 72-111 (220)
114 PRK14988 GMP/IMP nucleotidase; 79.9 2.9 6.4E-05 35.9 4.4 52 169-220 92-144 (224)
115 TIGR01548 HAD-SF-IA-hyp1 haloa 79.8 4.5 9.8E-05 33.5 5.4 14 113-126 2-15 (197)
116 PLN02770 haloacid dehalogenase 79.8 1.6 3.5E-05 38.0 2.8 16 111-126 22-37 (248)
117 COG1011 Predicted hydrolase (H 79.5 3.3 7.1E-05 34.4 4.5 53 169-221 98-150 (229)
118 TIGR03351 PhnX-like phosphonat 79.2 1.2 2.5E-05 37.4 1.7 15 112-126 2-16 (220)
119 TIGR01485 SPP_plant-cyano sucr 78.9 3.9 8.5E-05 35.4 5.0 14 111-124 1-14 (249)
120 PRK10187 trehalose-6-phosphate 78.9 5.1 0.00011 35.7 5.8 16 110-125 13-28 (266)
121 PRK10725 fructose-1-P/6-phosph 78.3 3.1 6.7E-05 33.8 3.9 16 111-126 5-20 (188)
122 TIGR02252 DREG-2 REG-2-like, H 78.3 1.3 2.7E-05 36.7 1.6 50 170-220 105-155 (203)
123 PRK13226 phosphoglycolate phos 78.3 1.1 2.4E-05 38.4 1.3 16 111-126 12-27 (229)
124 PRK13223 phosphoglycolate phos 78.2 1.2 2.5E-05 39.7 1.5 16 111-126 13-28 (272)
125 TIGR02009 PGMB-YQAB-SF beta-ph 78.0 1.2 2.6E-05 35.9 1.4 15 112-126 2-16 (185)
126 TIGR01457 HAD-SF-IIA-hyp2 HAD- 77.5 6.6 0.00014 34.5 6.0 15 112-126 2-16 (249)
127 PTZ00174 phosphomannomutase; P 77.4 1.6 3.4E-05 38.1 2.1 17 110-126 4-20 (247)
128 COG0647 NagD Predicted sugar p 77.0 5 0.00011 36.7 5.2 17 110-126 7-23 (269)
129 PRK13478 phosphonoacetaldehyde 76.6 1.5 3.2E-05 38.4 1.7 53 169-221 100-154 (267)
130 COG0241 HisB Histidinol phosph 76.5 10 0.00022 32.8 6.7 49 171-219 32-94 (181)
131 TIGR02252 DREG-2 REG-2-like, H 76.4 5.5 0.00012 32.8 5.0 14 113-126 2-15 (203)
132 PRK13225 phosphoglycolate phos 76.0 5.9 0.00013 35.6 5.4 17 110-126 61-77 (273)
133 COG3882 FkbH Predicted enzyme 76.0 1.2 2.7E-05 44.3 1.1 20 106-125 217-236 (574)
134 PTZ00445 p36-lilke protein; Pr 75.7 2.8 6.1E-05 37.5 3.2 62 108-198 40-104 (219)
135 TIGR01549 HAD-SF-IA-v1 haloaci 75.7 1.3 2.8E-05 34.9 0.9 14 113-126 1-14 (154)
136 COG0546 Gph Predicted phosphat 75.4 1.8 3.9E-05 37.0 1.8 49 169-217 88-137 (220)
137 PF13419 HAD_2: Haloacid dehal 75.2 1.3 2.9E-05 34.2 0.9 13 114-126 1-13 (176)
138 TIGR02254 YjjG/YfnB HAD superf 75.1 1.6 3.4E-05 36.3 1.3 15 112-126 2-16 (224)
139 TIGR01422 phosphonatase phosph 75.1 1.9 4.2E-05 37.2 1.9 15 112-126 3-17 (253)
140 PRK10748 flavin mononucleotide 74.9 1.5 3.3E-05 37.8 1.3 29 169-197 112-140 (238)
141 TIGR01460 HAD-SF-IIA Haloacid 74.8 5.3 0.00012 34.7 4.7 13 114-126 1-13 (236)
142 PLN03243 haloacid dehalogenase 74.8 1.9 4E-05 38.5 1.8 17 110-126 23-39 (260)
143 TIGR01509 HAD-SF-IA-v3 haloaci 74.8 1.5 3.2E-05 35.0 1.1 13 113-125 1-13 (183)
144 TIGR02247 HAD-1A3-hyp Epoxide 74.2 2.1 4.5E-05 35.7 1.8 51 168-218 92-145 (211)
145 TIGR01428 HAD_type_II 2-haloal 74.2 1.7 3.6E-05 35.9 1.3 15 112-126 2-16 (198)
146 PRK14988 GMP/IMP nucleotidase; 73.8 1.9 4E-05 37.2 1.5 16 110-125 9-24 (224)
147 TIGR00338 serB phosphoserine p 73.6 2 4.4E-05 35.9 1.7 18 109-126 12-29 (219)
148 TIGR01454 AHBA_synth_RP 3-amin 73.6 1.3 2.9E-05 36.8 0.6 13 114-126 1-13 (205)
149 PRK09449 dUMP phosphatase; Pro 73.6 1.7 3.6E-05 36.5 1.2 13 112-124 4-16 (224)
150 TIGR01491 HAD-SF-IB-PSPlk HAD- 73.6 2 4.4E-05 34.9 1.6 15 111-125 4-18 (201)
151 PLN02940 riboflavin kinase 73.4 4.3 9.4E-05 38.2 4.0 53 169-221 92-146 (382)
152 PLN02423 phosphomannomutase 73.2 8.7 0.00019 33.7 5.6 17 110-126 6-22 (245)
153 TIGR01990 bPGM beta-phosphoglu 73.2 1.7 3.7E-05 35.0 1.1 48 169-218 86-134 (185)
154 KOG3120 Predicted haloacid deh 73.0 4.4 9.5E-05 36.9 3.7 54 169-222 83-138 (256)
155 PRK13478 phosphonoacetaldehyde 73.0 8.5 0.00018 33.7 5.5 16 111-126 4-19 (267)
156 PF03767 Acid_phosphat_B: HAD 72.9 2 4.2E-05 37.8 1.5 39 172-210 117-156 (229)
157 PRK10563 6-phosphogluconate ph 72.9 4.7 0.0001 33.8 3.7 48 169-218 87-135 (221)
158 TIGR00685 T6PP trehalose-phosp 72.9 3.7 8E-05 35.7 3.2 16 110-125 2-17 (244)
159 PRK10826 2-deoxyglucose-6-phos 72.5 2.4 5.1E-05 35.8 1.8 17 110-126 6-22 (222)
160 PRK13222 phosphoglycolate phos 72.3 2 4.3E-05 35.7 1.3 16 111-126 6-21 (226)
161 PRK11587 putative phosphatase; 72.0 7.8 0.00017 32.7 4.9 16 111-126 3-18 (218)
162 TIGR01489 DKMTPPase-SF 2,3-dik 71.7 2.4 5.1E-05 34.1 1.6 16 111-126 1-16 (188)
163 TIGR01449 PGP_bact 2-phosphogl 71.7 1.6 3.4E-05 36.1 0.6 13 114-126 1-13 (213)
164 TIGR01680 Veg_Stor_Prot vegeta 71.7 13 0.00029 34.3 6.6 48 172-219 147-197 (275)
165 PRK13582 thrH phosphoserine ph 71.3 2.3 5E-05 35.1 1.5 13 112-124 2-14 (205)
166 TIGR01493 HAD-SF-IA-v2 Haloaci 71.2 2 4.4E-05 34.5 1.1 45 169-219 89-133 (175)
167 TIGR02244 HAD-IG-Ncltidse HAD 70.9 6.3 0.00014 37.2 4.4 42 166-207 180-223 (343)
168 PLN02779 haloacid dehalogenase 70.0 2.5 5.4E-05 38.0 1.5 39 169-207 143-182 (286)
169 TIGR02247 HAD-1A3-hyp Epoxide 68.2 6.6 0.00014 32.7 3.6 14 112-125 3-16 (211)
170 PRK10563 6-phosphogluconate ph 67.5 3.1 6.8E-05 34.8 1.5 16 111-126 4-19 (221)
171 PLN02779 haloacid dehalogenase 67.4 10 0.00023 34.0 5.0 16 111-126 40-55 (286)
172 PLN02954 phosphoserine phospha 67.1 3.3 7.2E-05 34.7 1.6 16 110-125 11-26 (224)
173 TIGR01545 YfhB_g-proteo haloac 66.7 12 0.00025 32.3 4.9 36 170-205 94-131 (210)
174 PLN03017 trehalose-phosphatase 66.1 11 0.00024 36.0 5.1 17 107-123 107-123 (366)
175 PF12710 HAD: haloacid dehalog 66.0 7.6 0.00017 31.2 3.5 46 171-216 86-138 (192)
176 PRK11590 hypothetical protein; 65.9 13 0.00028 31.5 5.0 16 110-125 5-20 (211)
177 PRK12702 mannosyl-3-phosphogly 65.5 13 0.00028 34.8 5.2 14 112-125 2-15 (302)
178 PLN02887 hydrolase family prot 63.4 15 0.00033 37.0 5.6 17 110-126 307-323 (580)
179 COG1877 OtsB Trehalose-6-phosp 63.2 14 0.00031 33.7 5.0 62 106-204 13-76 (266)
180 COG0546 Gph Predicted phosphat 63.2 23 0.0005 30.2 6.1 18 110-127 3-20 (220)
181 TIGR01990 bPGM beta-phosphoglu 63.2 14 0.0003 29.6 4.5 13 114-126 2-14 (185)
182 TIGR01691 enolase-ppase 2,3-di 61.8 14 0.00031 32.3 4.6 39 169-207 94-133 (220)
183 PRK06698 bifunctional 5'-methy 61.2 3.8 8.1E-05 39.1 1.0 15 112-126 242-256 (459)
184 PLN02382 probable sucrose-phos 61.0 5.5 0.00012 38.1 2.1 17 109-125 7-23 (413)
185 COG1011 Predicted hydrolase (H 60.4 5.2 0.00011 33.2 1.6 16 110-125 3-18 (229)
186 COG0637 Predicted phosphatase/ 60.1 4.9 0.00011 34.7 1.4 53 169-221 85-138 (221)
187 TIGR01511 ATPase-IB1_Cu copper 59.8 22 0.00048 35.1 6.1 41 168-208 403-444 (562)
188 PF05116 S6PP: Sucrose-6F-phos 59.2 5.3 0.00012 35.2 1.5 14 110-123 1-14 (247)
189 PRK09552 mtnX 2-hydroxy-3-keto 58.8 5.4 0.00012 33.8 1.4 16 111-126 3-18 (219)
190 TIGR01493 HAD-SF-IA-v2 Haloaci 58.3 4.2 9.1E-05 32.6 0.6 13 114-126 2-14 (175)
191 COG0637 Predicted phosphatase/ 57.6 11 0.00023 32.6 3.0 15 112-126 3-17 (221)
192 PF00702 Hydrolase: haloacid d 57.3 25 0.00055 28.4 5.1 44 166-209 123-167 (215)
193 COG0560 SerB Phosphoserine pho 57.1 5.9 0.00013 34.4 1.4 15 110-124 4-18 (212)
194 PLN02151 trehalose-phosphatase 57.0 20 0.00044 34.1 5.0 18 107-124 94-111 (354)
195 COG3769 Predicted hydrolase (H 56.2 7.8 0.00017 35.4 2.0 27 175-201 106-132 (274)
196 PF06888 Put_Phosphatase: Puta 55.9 25 0.00055 31.4 5.2 52 169-220 70-124 (234)
197 TIGR02137 HSK-PSP phosphoserin 55.9 6 0.00013 34.0 1.2 11 114-124 4-14 (203)
198 PLN02177 glycerol-3-phosphate 55.9 11 0.00024 37.2 3.2 22 184-205 121-142 (497)
199 PLN02575 haloacid dehalogenase 55.8 6.4 0.00014 37.7 1.5 17 110-126 130-146 (381)
200 PRK09456 ?-D-glucose-1-phospha 55.4 7 0.00015 32.5 1.5 54 168-221 82-137 (199)
201 PLN02811 hydrolase 55.0 15 0.00033 31.1 3.5 51 169-219 77-129 (220)
202 TIGR02471 sucr_syn_bact_C sucr 54.0 6.3 0.00014 33.7 1.0 12 114-125 2-13 (236)
203 PRK09456 ?-D-glucose-1-phospha 53.8 18 0.00039 30.0 3.8 13 113-125 2-14 (199)
204 PHA02597 30.2 hypothetical pro 53.6 14 0.00029 30.5 3.0 16 111-126 2-17 (197)
205 PLN02940 riboflavin kinase 53.2 9.7 0.00021 35.8 2.3 16 111-126 11-26 (382)
206 TIGR01545 YfhB_g-proteo haloac 52.6 8.1 0.00018 33.2 1.5 17 110-126 4-20 (210)
207 PRK14501 putative bifunctional 50.8 27 0.00059 35.5 5.2 18 108-125 489-506 (726)
208 TIGR01525 ATPase-IB_hvy heavy 49.2 24 0.00052 34.7 4.3 48 166-213 380-429 (556)
209 PLN02580 trehalose-phosphatase 49.0 34 0.00074 32.9 5.2 63 106-205 114-176 (384)
210 PLN02919 haloacid dehalogenase 48.5 32 0.0007 37.0 5.4 52 171-222 162-215 (1057)
211 TIGR02726 phenyl_P_delta pheny 47.4 81 0.0018 26.5 6.7 30 184-213 49-78 (169)
212 COG4502 5'(3')-deoxyribonucleo 42.7 21 0.00046 30.7 2.5 30 169-198 67-96 (180)
213 PF11019 DUF2608: Protein of u 40.9 15 0.00033 32.9 1.4 14 110-123 19-32 (252)
214 PLN02499 glycerol-3-phosphate 39.9 23 0.0005 35.3 2.6 25 185-209 108-133 (498)
215 PF06941 NT5C: 5' nucleotidase 38.2 17 0.00037 30.3 1.3 13 110-122 1-13 (191)
216 PF08235 LNS2: LNS2 (Lipin/Ned 38.1 78 0.0017 26.8 5.2 37 170-206 27-64 (157)
217 TIGR01512 ATPase-IB2_Cd heavy 36.5 42 0.00092 32.9 3.9 47 167-213 359-407 (536)
218 PRK10748 flavin mononucleotide 34.1 47 0.001 28.6 3.4 15 112-126 11-25 (238)
219 PLN02919 haloacid dehalogenase 33.1 37 0.00081 36.5 3.1 17 110-126 74-90 (1057)
220 PRK12654 putative monovalent c 29.5 42 0.00091 28.4 2.2 19 24-42 2-20 (151)
221 KOG3107 Predicted haloacid deh 28.7 92 0.002 30.7 4.6 12 112-123 198-209 (468)
222 PF05822 UMPH-1: Pyrimidine 5' 28.7 60 0.0013 29.5 3.2 39 168-206 88-127 (246)
223 PF01899 MNHE: Na+/H+ ion anti 27.6 47 0.001 27.1 2.2 24 19-42 49-72 (156)
224 cd06537 CIDE_N_B CIDE_N domain 27.2 1.2E+02 0.0027 23.2 4.2 17 110-126 38-54 (81)
225 cd06539 CIDE_N_A CIDE_N domain 26.6 1.6E+02 0.0034 22.5 4.6 17 110-126 39-55 (78)
226 cd02974 AhpF_NTD_N Alkyl hydro 25.3 70 0.0015 24.5 2.6 34 172-206 7-40 (94)
227 PLN02205 alpha,alpha-trehalose 24.8 38 0.00083 35.7 1.4 17 109-125 594-610 (854)
228 PF07615 Ykof: YKOF-related Fa 24.4 59 0.0013 24.3 2.0 24 186-209 4-27 (81)
229 KOG2134 Polynucleotide kinase 24.1 1.3E+02 0.0027 29.6 4.6 21 106-126 70-90 (422)
230 PLN02588 glycerol-3-phosphate 22.7 84 0.0018 31.7 3.2 17 110-126 49-65 (525)
231 PRK12651 putative monovalent c 21.9 69 0.0015 26.6 2.2 18 25-42 56-73 (158)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.90 E-value=4.8e-25 Score=197.52 Aligned_cols=102 Identities=44% Similarity=0.624 Sum_probs=84.0
Q ss_pred CCCCCCCCeeEEEeCCCceeccccCCC-chHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHh
Q 027383 104 GDGQEIEKLTVVLDLDETLVCAYETSS-LPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKL 182 (224)
Q Consensus 104 ~~~~~~~KltLVLDLDETLVhs~e~Ss-~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~l 182 (224)
++....+|++|||||||||||+. . +++.. .+ .| .++++++|. ...+||.+|||++|||+.+
T Consensus 82 ~~~~~~~kk~lVLDLDeTLvHss---~~~~~~~-----~~---d~-----~~~v~~~~~--~~~~yV~kRP~vdeFL~~~ 143 (262)
T KOG1605|consen 82 LRLATVGRKTLVLDLDETLVHSS---LNLKPIV-----NA---DF-----TVPVEIDGH--IHQVYVRKRPHVDEFLSRV 143 (262)
T ss_pred cccccCCCceEEEeCCCcccccc---cccCCCC-----Cc---ce-----eeeeeeCCc--ceEEEEEcCCCHHHHHHHh
Confidence 44558899999999999999983 2 33211 11 13 335566664 5889999999999999999
Q ss_pred hhCceEEEEcCCchhhHHHHHHhhCCC-CccceeeecCCcCC
Q 027383 183 AEFADLVLFTAGLEGYARPLVDKIDRE-NLFSLRLYRPSTVS 223 (224)
Q Consensus 183 se~fEIvIFTAg~k~YA~~Vld~IDP~-~~F~~RLyRdsC~~ 223 (224)
+++||+++|||+.+.||++|+|.|||. ++|+||+||+||+.
T Consensus 144 s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~ 185 (262)
T KOG1605|consen 144 SKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTL 185 (262)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEe
Confidence 999999999999999999999999995 69999999999974
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=99.90 E-value=5.7e-24 Score=176.17 Aligned_cols=95 Identities=47% Similarity=0.655 Sum_probs=76.3
Q ss_pred CeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEEE
Q 027383 111 KLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVL 190 (224)
Q Consensus 111 KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIvI 190 (224)
|+||||||||||||+.... ..+ .. .|.+ +....|+ ...+||++|||++|||++++++||++|
T Consensus 1 k~~lvlDLDeTLi~~~~~~----~~~----~~---~~~~-----~~~~~~~--~~~~~v~~RPgl~eFL~~l~~~yei~I 62 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKM----PKV----DA---DFKV-----PVLIDGK--IIPVYVFKRPHVDEFLERVSKWYELVI 62 (162)
T ss_pred CcEEEEcCCCCcCCCCCCC----CCC----CC---ceEE-----EEEecCc--EEEEEEEECCCHHHHHHHHHhcCEEEE
Confidence 6899999999999985321 100 01 1222 1122332 568999999999999999999999999
Q ss_pred EcCCchhhHHHHHHhhCCCC-ccceeeecCCcCC
Q 027383 191 FTAGLEGYARPLVDKIDREN-LFSLRLYRPSTVS 223 (224)
Q Consensus 191 FTAg~k~YA~~Vld~IDP~~-~F~~RLyRdsC~~ 223 (224)
||++.+.||++|++.|||.+ +|++++||++|..
T Consensus 63 ~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~ 96 (162)
T TIGR02251 63 FTASLEEYADPVLDILDRGGKVISRRLYRESCVF 96 (162)
T ss_pred EcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE
Confidence 99999999999999999997 8999999999963
No 3
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.88 E-value=1.2e-22 Score=168.38 Aligned_cols=103 Identities=30% Similarity=0.473 Sum_probs=78.2
Q ss_pred CCCCeeEEEeCCCceeccccCCCchHHhh----hhHh--hhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHH
Q 027383 108 EIEKLTVVLDLDETLVCAYETSSLPAIIR----TQAA--EAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKK 181 (224)
Q Consensus 108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r----~q~~--eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~ 181 (224)
.++|++||||||||||||...+....... ++.. ..+...|.+ + ....++++|||++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~---------~----~~~~~v~~rPgv~efL~~ 69 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNL---------G----TMWYLTKLRPFLHEFLKE 69 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEc---------C----CeEEEEEECCCHHHHHHH
Confidence 46899999999999999986543332111 0000 011122222 1 256899999999999999
Q ss_pred hhhCceEEEEcCCchhhHHHHHHhhCCCC-cccee-eecCCcCC
Q 027383 182 LAEFADLVLFTAGLEGYARPLVDKIDREN-LFSLR-LYRPSTVS 223 (224)
Q Consensus 182 lse~fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~R-LyRdsC~~ 223 (224)
+++.||++|||++.+.||++|++.|||.+ +|++| ++|++|..
T Consensus 70 l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~ 113 (156)
T TIGR02250 70 ASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGS 113 (156)
T ss_pred HHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCC
Confidence 99999999999999999999999999996 89777 67999963
No 4
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=99.85 E-value=1.2e-21 Score=158.66 Aligned_cols=88 Identities=42% Similarity=0.623 Sum_probs=68.0
Q ss_pred eeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEEEE
Q 027383 112 LTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLF 191 (224)
Q Consensus 112 ltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIvIF 191 (224)
|+|||||||||||+...+..+ . .+.. . + ....+++++|||+++||++++++||++||
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~---------~---~~~~-----~----~--~~~~~~v~~RP~l~~FL~~l~~~~ev~i~ 57 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLP---------Y---DFKI-----I----D--QRGGYYVKLRPGLDEFLEELSKHYEVVIW 57 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-------------SEEE-----E----T--EEEEEEEEE-TTHHHHHHHHHHHCEEEEE
T ss_pred CEEEEeCCCcEEEEeecCCCC---------c---ccce-----e----c--cccceeEeeCchHHHHHHHHHHhceEEEE
Confidence 689999999999986432111 0 0110 0 0 13578999999999999999999999999
Q ss_pred cCCchhhHHHHHHhhCCCC-ccceeeecCCcC
Q 027383 192 TAGLEGYARPLVDKIDREN-LFSLRLYRPSTV 222 (224)
Q Consensus 192 TAg~k~YA~~Vld~IDP~~-~F~~RLyRdsC~ 222 (224)
|++++.||++|++.|||++ .|++++||++|.
T Consensus 58 T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~ 89 (159)
T PF03031_consen 58 TSASEEYAEPVLDALDPNGKLFSRRLYRDDCT 89 (159)
T ss_dssp -SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSE
T ss_pred EeehhhhhhHHHHhhhhhcccccccccccccc
Confidence 9999999999999999965 899999999995
No 5
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=99.81 E-value=7.1e-20 Score=157.86 Aligned_cols=82 Identities=24% Similarity=0.238 Sum_probs=68.2
Q ss_pred CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383 106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF 185 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~ 185 (224)
+...+|++|||||||||||+... ....++.+||||+|||+.++++
T Consensus 16 ~~~~~kklLVLDLDeTLvh~~~~-----------------------------------~~~~~~~kRP~l~eFL~~~~~~ 60 (195)
T TIGR02245 16 PPREGKKLLVLDIDYTLFDHRSP-----------------------------------AETGEELMRPYLHEFLTSAYED 60 (195)
T ss_pred CCCCCCcEEEEeCCCceEccccc-----------------------------------CCCceEEeCCCHHHHHHHHHhC
Confidence 33568999999999999996310 0123588999999999999999
Q ss_pred ceEEEEcCCchhhHHHHHHhhCCCC--ccceeeecCCcC
Q 027383 186 ADLVLFTAGLEGYARPLVDKIDREN--LFSLRLYRPSTV 222 (224)
Q Consensus 186 fEIvIFTAg~k~YA~~Vld~IDP~~--~F~~RLyRdsC~ 222 (224)
|||+||||+++.||+++++.|++.+ .++.++++|+|.
T Consensus 61 feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~ 99 (195)
T TIGR02245 61 YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTA 99 (195)
T ss_pred CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEecccc
Confidence 9999999999999999999998753 477788889984
No 6
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.68 E-value=1.4e-16 Score=129.38 Aligned_cols=98 Identities=42% Similarity=0.527 Sum_probs=75.9
Q ss_pred CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEE
Q 027383 110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLV 189 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIv 189 (224)
+|++|||||||||||+...|..+ .. -..+. +.+.+.+. ...++++.|||++|||+++.+.|+++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~-~~--------~~~~~-----~~~~~~~~--~~~~~v~l~pG~~e~L~~L~~~~~l~ 64 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKE-WT--------NRDFI-----VPVLIDGH--PHGVYVKKRPGVDEFLKRASELFELV 64 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCC-CC--------ccceE-----EEEEeCCc--eEEEEEEECCCHHHHHHHHHhccEEE
Confidence 58999999999999986433221 10 00111 12222232 46789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHhhCCCC-ccceeeecCCcCC
Q 027383 190 LFTAGLEGYARPLVDKIDREN-LFSLRLYRPSTVS 223 (224)
Q Consensus 190 IFTAg~k~YA~~Vld~IDP~~-~F~~RLyRdsC~~ 223 (224)
|||++.+.||+.+++.+++.+ +|+..+++++|..
T Consensus 65 I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~ 99 (148)
T smart00577 65 VFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF 99 (148)
T ss_pred EEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc
Confidence 999999999999999999976 6799999999964
No 7
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.61 E-value=5.2e-16 Score=153.00 Aligned_cols=107 Identities=30% Similarity=0.337 Sum_probs=75.7
Q ss_pred CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhCceEE
Q 027383 110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEFADLV 189 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~fEIv 189 (224)
++|.||+|||.||+|+...+.+..+......++ +..+....=..++...+...+||++|||+.|||+++++.||++
T Consensus 145 ~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~----~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemh 220 (635)
T KOG0323|consen 145 KKLHLVLDLDHTLLHTILKSDLSETEKYLKEEA----ESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMH 220 (635)
T ss_pred hcceeehhhhhHHHHhhccchhhhhhhhccccc----ccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeE
Confidence 457999999999999987655543322110000 0000000000011001246799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHhhCCCC-cccee-eecCC
Q 027383 190 LFTAGLEGYARPLVDKIDREN-LFSLR-LYRPS 220 (224)
Q Consensus 190 IFTAg~k~YA~~Vld~IDP~~-~F~~R-LyRds 220 (224)
|||+|.+.||..|+++|||++ +|++| +.||.
T Consensus 221 VyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 221 VYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 999999999999999999998 89998 66775
No 8
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.53 E-value=1.4e-14 Score=135.13 Aligned_cols=85 Identities=27% Similarity=0.401 Sum_probs=75.2
Q ss_pred CCCCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhh
Q 027383 104 GDGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLA 183 (224)
Q Consensus 104 ~~~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~ls 183 (224)
+.+..++++||||||.++|||.. |.. + ..|.+++|||++.||++++
T Consensus 182 ~pPy~Qp~yTLVleledvLVhpd-------ws~----~-----------------------tGwRf~kRPgvD~FL~~~a 227 (393)
T KOG2832|consen 182 PPPYEQPPYTLVLELEDVLVHPD-------WSY----K-----------------------TGWRFKKRPGVDYFLGHLA 227 (393)
T ss_pred CCcccCCCceEEEEeeeeEeccc-------hhh----h-----------------------cCceeccCchHHHHHHhhc
Confidence 34667799999999999999962 321 1 2356899999999999999
Q ss_pred hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383 184 EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222 (224)
Q Consensus 184 e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~ 222 (224)
++|||||||+....||.+|++.|||+|.++++|||++|.
T Consensus 228 ~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~ 266 (393)
T KOG2832|consen 228 KYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATK 266 (393)
T ss_pred ccceEEEEecCCccchhhhHhhcCCcceEEEEEecCccc
Confidence 999999999999999999999999999999999999996
No 9
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.51 E-value=1.2e-14 Score=136.71 Aligned_cols=99 Identities=42% Similarity=0.536 Sum_probs=80.6
Q ss_pred CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383 106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF 185 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~ 185 (224)
.....+++|++|||+||+|+.... + ....|.. ..+..+. ...++|.+||+|++|+..++++
T Consensus 207 ~~~~~~k~L~l~lde~l~~S~~~~----~--------~~~df~~-----~~e~~~~--~~~~~v~kRp~l~~fl~~ls~~ 267 (390)
T COG5190 207 KSTSPKKTLVLDLDETLVHSSFRY----I--------TLLDFLV-----KVEISLL--QHLVYVSKRPELDYFLGKLSKI 267 (390)
T ss_pred cCCCCccccccCCCccceeecccc----c--------cccchhh-----ccccccc--eeEEEEcCChHHHHHHhhhhhh
Confidence 667789999999999999985321 0 0011322 1222332 4789999999999999999999
Q ss_pred ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcCC
Q 027383 186 ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVS 223 (224)
Q Consensus 186 fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~~ 223 (224)
|++++||++.+.||++|+++||+.+.|++|+||.+|+.
T Consensus 268 ~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~~ 305 (390)
T COG5190 268 HELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVS 305 (390)
T ss_pred EEEEEEecchhhhcchHHHhccccceeehhhhccccee
Confidence 99999999999999999999999999999999999975
No 10
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.20 E-value=6.3e-07 Score=85.00 Aligned_cols=103 Identities=29% Similarity=0.396 Sum_probs=75.8
Q ss_pred CCCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh
Q 027383 105 DGQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE 184 (224)
Q Consensus 105 ~~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse 184 (224)
.....+++.||.|+|.|.+|+....+.|.. .++..+..++.+. +-...+ ....++++.||++..|+...++
T Consensus 20 ~l~q~~~~~l~~~~~~~~~h~~~~~~~p~~-~~~~~~~~~~~~~------~~~~~~--~~~~~~~k~~~~l~~~~~~i~~ 90 (390)
T COG5190 20 ALRQDKKLILVVDLDQTIIHTTVDPNDPNN-VNQSLERTLKSVN------DRDPVQ--EKCAYYVKARPKLFPFLTKISP 90 (390)
T ss_pred HhhcCcccccccccccceecccccCCCCCc-hhhhhhccccchh------cccccc--ccccceeeecccccchhhhhch
Confidence 456678999999999999999754333322 1233332222110 101111 2467899999999999999999
Q ss_pred CceEEEEcCCchhhHHHHHHhhCCCC-ccceee
Q 027383 185 FADLVLFTAGLEGYARPLVDKIDREN-LFSLRL 216 (224)
Q Consensus 185 ~fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~RL 216 (224)
.||+.+||+|++.||+.++.++||.| .|..|.
T Consensus 91 ~~e~~~~~~~~~~~~~~~~~i~d~~g~~~~d~~ 123 (390)
T COG5190 91 LYELHIYTMGTRAYAERIAKIIDPTGKLFNDRI 123 (390)
T ss_pred hcceeeEeeccccchhhhhhccccccccccccc
Confidence 99999999999999999999999997 787763
No 11
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.92 E-value=3.4e-05 Score=71.14 Aligned_cols=74 Identities=26% Similarity=0.277 Sum_probs=60.6
Q ss_pred CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEec-cCHHHHHHHhhhC-
Q 027383 108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFER-PGLHEFLKKLAEF- 185 (224)
Q Consensus 108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~R-PgL~EFL~~lse~- 185 (224)
-+.+..+|+||||||+-..+ -|..| |++.|.|+++.+.
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~----------------------------------------~v~irdPgV~EaL~~LkekG 162 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE----------------------------------------PVRIRDPRIYDSLTELKKRG 162 (301)
T ss_pred cccceEEEEecCCCCcCCCC----------------------------------------ccccCCHHHHHHHHHHHHCC
Confidence 34577999999999996310 14568 9999999999986
Q ss_pred ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 186 ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 186 fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+-++|+|++.+.+++.+++.++-.++|+..+.-++.
T Consensus 163 ikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 163 CILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred CEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 899999999999999999999888888776665544
No 12
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.90 E-value=3.6e-05 Score=71.04 Aligned_cols=75 Identities=25% Similarity=0.242 Sum_probs=61.9
Q ss_pred CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEec-cCHHHHHHHhhhC-
Q 027383 108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFER-PGLHEFLKKLAEF- 185 (224)
Q Consensus 108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~R-PgL~EFL~~lse~- 185 (224)
-+.++.+|+||||||+...+ -|..| |++.|.|+++.+.
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~----------------------------------------~v~irdp~V~EtL~eLkekG 164 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE----------------------------------------PVRIRDPFVYDSLDELKERG 164 (303)
T ss_pred eeeccEEEEecCCCccCCCC----------------------------------------ccccCChhHHHHHHHHHHCC
Confidence 34678899999999996420 14568 9999999999975
Q ss_pred ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383 186 ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222 (224)
Q Consensus 186 fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~ 222 (224)
+-+.|+|+|.+.+++.+++.+.-.++|+..+..++..
T Consensus 165 ikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~ 201 (303)
T PHA03398 165 CVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKA 201 (303)
T ss_pred CEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcc
Confidence 8999999999999999999998888887777666543
No 13
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.75 E-value=7.2e-05 Score=55.63 Aligned_cols=48 Identities=25% Similarity=0.303 Sum_probs=39.4
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL 216 (224)
...+|++.++|+++.+. +.++|.|++...+++.+++.+.-...++..+
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~ 71 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVI 71 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhhee
Confidence 56799999999999986 9999999999999999999876433333333
No 14
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.30 E-value=0.00085 Score=61.82 Aligned_cols=49 Identities=22% Similarity=0.354 Sum_probs=42.2
Q ss_pred cCHHHHHHHhhhCc-eEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 173 PGLHEFLKKLAEFA-DLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 173 PgL~EFL~~lse~f-EIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
|.+.+-|.++.+.+ -+++|+.|.++||..-++.+.-.++|+..|.+.+-
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~ 194 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNK 194 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCcc
Confidence 56778899998765 89999999999999999999877899998887653
No 15
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.93 E-value=0.0039 Score=48.59 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=34.2
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCc--------hhhHHHHHHhhCCC
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGL--------EGYARPLVDKIDRE 209 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~--------k~YA~~Vld~IDP~ 209 (224)
....|++.++|+++.+. +.++|-|++. ..+++.+++.+.-.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 34679999999999754 9999999999 88888888887543
No 16
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.85 E-value=0.0034 Score=53.38 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=43.8
Q ss_pred EEEeccCHHHHHHHhh-hCceEEEEcCC-chhhHHHHHHhhCCC---------CccceeeecC
Q 027383 168 TVFERPGLHEFLKKLA-EFADLVLFTAG-LEGYARPLVDKIDRE---------NLFSLRLYRP 219 (224)
Q Consensus 168 ~V~~RPgL~EFL~~ls-e~fEIvIFTAg-~k~YA~~Vld~IDP~---------~~F~~RLyRd 219 (224)
.+..+||+.|+|+.+. +.+.+.|-|++ ...+++.+++.++-. .+|+..+.-+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~ 105 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIY 105 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeecc
Confidence 4778999999999997 55999999988 999999999999866 6677766543
No 17
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.84 E-value=0.0014 Score=52.09 Aligned_cols=38 Identities=16% Similarity=0.041 Sum_probs=34.0
Q ss_pred EeccCHHHHHHHhhh-CceEEEEcCC-chhhHHHHHHhhC
Q 027383 170 FERPGLHEFLKKLAE-FADLVLFTAG-LEGYARPLVDKID 207 (224)
Q Consensus 170 ~~RPgL~EFL~~lse-~fEIvIFTAg-~k~YA~~Vld~ID 207 (224)
...||+.++|+.+.+ .+.++|-|++ .+.|+..+++...
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 467999999999974 6999999999 9999999998876
No 18
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.66 E-value=0.0078 Score=48.48 Aligned_cols=40 Identities=23% Similarity=0.155 Sum_probs=31.1
Q ss_pred EEeccCHHHHHHHhh-hCceEEEEcCCch---------------hhHHHHHHhhCC
Q 027383 169 VFERPGLHEFLKKLA-EFADLVLFTAGLE---------------GYARPLVDKIDR 208 (224)
Q Consensus 169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k---------------~YA~~Vld~IDP 208 (224)
+...||+.++|+++. +-|.++|-|++.+ .++..+++.++-
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 81 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGV 81 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCC
Confidence 356899999999997 5599999999874 456666666543
No 19
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.45 E-value=0.0046 Score=54.97 Aligned_cols=48 Identities=4% Similarity=0.070 Sum_probs=36.6
Q ss_pred ccCHHHHHHHhhhC-ceEEEEcCC----chhhHHHHHHhhCCCCccceeeecC
Q 027383 172 RPGLHEFLKKLAEF-ADLVLFTAG----LEGYARPLVDKIDRENLFSLRLYRP 219 (224)
Q Consensus 172 RPgL~EFL~~lse~-fEIvIFTAg----~k~YA~~Vld~IDP~~~F~~RLyRd 219 (224)
.|+..|||+++.+. +.++|-|+. .+.+++.+++.+.-.+.|...+..+
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d 168 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGD 168 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCC
Confidence 34499999999865 899999998 6679999998876655565444433
No 20
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.34 E-value=0.016 Score=52.45 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=39.2
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCc----cceeeecCC
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENL----FSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~----F~~RLyRds 220 (224)
...-||..+||+++.+. ..++|-|+..+.+.+...+.|...++ +++.+.|+.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~ 173 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD 173 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC
Confidence 34579999999999754 78999999998888877777655542 466777753
No 21
>PRK08238 hypothetical protein; Validated
Probab=96.23 E-value=0.0084 Score=58.33 Aligned_cols=47 Identities=19% Similarity=0.147 Sum_probs=38.4
Q ss_pred EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeec
Q 027383 169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR 218 (224)
Q Consensus 169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyR 218 (224)
...+|+..|+++++. +-+.++|-|++.+.+++++++.+.- |++.+.-
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigs 118 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFAS 118 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeC
Confidence 347899999999997 5589999999999999999998853 5544443
No 22
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.14 E-value=0.013 Score=47.65 Aligned_cols=48 Identities=10% Similarity=0.016 Sum_probs=36.1
Q ss_pred eccCHHHHHHHh-hhCceEEEEcCCchhhHH------------HHHHhhCCCCc-cceeeec
Q 027383 171 ERPGLHEFLKKL-AEFADLVLFTAGLEGYAR------------PLVDKIDRENL-FSLRLYR 218 (224)
Q Consensus 171 ~RPgL~EFL~~l-se~fEIvIFTAg~k~YA~------------~Vld~IDP~~~-F~~RLyR 218 (224)
..+...+-|+++ .+-+++++.|+-.....+ .+.+.|+.+++ +++.+.|
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~ 86 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVG 86 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeC
Confidence 456677788887 467899999998888877 88889988773 5555443
No 23
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.92 E-value=0.069 Score=44.13 Aligned_cols=28 Identities=25% Similarity=0.209 Sum_probs=24.2
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCch
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLE 196 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k 196 (224)
+..-||+.++|+++.+. |.++|.|++..
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 44569999999999865 99999999985
No 24
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.91 E-value=0.066 Score=44.25 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=24.2
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCch
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLE 196 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k 196 (224)
+...||+.++|+++.+. +.+.|-|++..
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~ 56 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSG 56 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 44679999999999975 99999999873
No 25
>COG4996 Predicted phosphatase [General function prediction only]
Probab=95.66 E-value=0.047 Score=45.98 Aligned_cols=88 Identities=28% Similarity=0.199 Sum_probs=62.0
Q ss_pred eEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccC-cccCCCcceeeEEEEeccCHHHHHHHhhhC-ceEEE
Q 027383 113 TVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSD-KECDGKPKINYVTVFERPGLHEFLKKLAEF-ADLVL 190 (224)
Q Consensus 113 tLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~-~~~~G~~~~~~v~V~~RPgL~EFL~~lse~-fEIvI 190 (224)
.+|+|+|+||......|++.+- |.. ++.. .+-++ ..-|.+||++.+||+++.+- |=+-.
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pP------------f~r--Vs~n~i~Ds~-----G~ev~L~~~v~~~l~warnsG~i~~~ 62 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPP------------FRR--VSSNTIEDSK-----GREVHLFPDVKETLKWARNSGYILGL 62 (164)
T ss_pred cEEEeCCCcccccccchhcCCc------------cee--cCccceecCC-----CeEEEEcHHHHHHHHHHHhCCcEEEE
Confidence 4799999999944444555321 211 1111 11122 23488999999999999854 77779
Q ss_pred EcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383 191 FTAGLEGYARPLVDKIDRENLFSLRLYRP 219 (224)
Q Consensus 191 FTAg~k~YA~~Vld~IDP~~~F~~RLyRd 219 (224)
+|=..+.-|-+++..+|-..+|++..-.+
T Consensus 63 ~sWN~~~kA~~aLral~~~~yFhy~VieP 91 (164)
T COG4996 63 ASWNFEDKAIKALRALDLLQYFHYIVIEP 91 (164)
T ss_pred eecCchHHHHHHHHHhchhhhEEEEEecC
Confidence 99999999999999999998888766544
No 26
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.62 E-value=0.032 Score=49.74 Aligned_cols=51 Identities=10% Similarity=0.133 Sum_probs=36.5
Q ss_pred EEeccCHHHHHHHhh-hCceEEEEcCC----chhhHHHHHHhhCC--CCccceeeecC
Q 027383 169 VFERPGLHEFLKKLA-EFADLVLFTAG----LEGYARPLVDKIDR--ENLFSLRLYRP 219 (224)
Q Consensus 169 V~~RPgL~EFL~~ls-e~fEIvIFTAg----~k~YA~~Vld~IDP--~~~F~~RLyRd 219 (224)
....||..|||+.+. +-++|++-|+. .+.+++.+++.+.- .+.|...+..+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd 170 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGD 170 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCC
Confidence 445566999999994 66899999984 56688888886654 44565544433
No 27
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.52 E-value=0.086 Score=43.93 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=29.5
Q ss_pred eccCHHHHHHHhh-hCceEEEEcCCchh------------hHHHHHHhhCC
Q 027383 171 ERPGLHEFLKKLA-EFADLVLFTAGLEG------------YARPLVDKIDR 208 (224)
Q Consensus 171 ~RPgL~EFL~~ls-e~fEIvIFTAg~k~------------YA~~Vld~IDP 208 (224)
.-||+.+.|+++. +-+.+.|-|++... +++.+++.++-
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 3499999999996 57999999998763 46666666553
No 28
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.51 E-value=0.023 Score=51.71 Aligned_cols=65 Identities=28% Similarity=0.219 Sum_probs=47.7
Q ss_pred CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-CceE
Q 027383 110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FADL 188 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~fEI 188 (224)
.+++||+|||+||.....- +.|. .|.. .....|+++++|+++.+ -+-+
T Consensus 2 ~~k~~v~DlDnTlw~gv~~------------e~g~--------------~~i~-----~~~~~~~~~e~L~~L~~~Gi~l 50 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLG------------EDGI--------------DNLN-----LSPLHKTLQEKIKTLKKQGFLL 50 (320)
T ss_pred CeEEEEEcCCCCCCCCEEc------------cCCc--------------cccc-----cCccHHHHHHHHHHHHhCCCEE
Confidence 4789999999999964210 1111 1110 11236899999999985 5899
Q ss_pred EEEcCCchhhHHHHHHh
Q 027383 189 VLFTAGLEGYARPLVDK 205 (224)
Q Consensus 189 vIFTAg~k~YA~~Vld~ 205 (224)
.|-|+..+..|..+++.
T Consensus 51 ai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 51 ALASKNDEDDAKKVFER 67 (320)
T ss_pred EEEcCCCHHHHHHHHHh
Confidence 99999999999999987
No 29
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=95.32 E-value=0.084 Score=44.94 Aligned_cols=42 Identities=24% Similarity=0.331 Sum_probs=30.2
Q ss_pred EEEeccCHHHHHHHhhh-CceEEEEc-CCchhhHHHHHHhhCCC
Q 027383 168 TVFERPGLHEFLKKLAE-FADLVLFT-AGLEGYARPLVDKIDRE 209 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse-~fEIvIFT-Ag~k~YA~~Vld~IDP~ 209 (224)
-+.+-|++.+.|+.+.+ -..|.+=| +..++.|+++++.++-.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 48889999999999995 68888888 56789999999999876
No 30
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.18 E-value=0.15 Score=42.45 Aligned_cols=47 Identities=17% Similarity=0.048 Sum_probs=37.2
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCC---------------chhhHHHHHHhhCCCCccceeee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAG---------------LEGYARPLVDKIDRENLFSLRLY 217 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg---------------~k~YA~~Vld~IDP~~~F~~RLy 217 (224)
+..-||+.+.|+++.+ -|.++|-|+. ...|++.+++.++-. |+..++
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~ 90 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLI 90 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEE
Confidence 5678999999999986 5999999996 356788888777665 665554
No 31
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.62 E-value=0.069 Score=47.24 Aligned_cols=50 Identities=14% Similarity=0.178 Sum_probs=43.0
Q ss_pred EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCC-ccceeeecC
Q 027383 170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDREN-LFSLRLYRP 219 (224)
Q Consensus 170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~-~F~~RLyRd 219 (224)
...|+..++|+++.+. +.++|-|+..+..++.+++.|+..+ +|+.....+
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~ 238 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRP 238 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCc
Confidence 4589999999999865 8999999999999999999998887 676655554
No 32
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=94.55 E-value=0.032 Score=51.57 Aligned_cols=45 Identities=24% Similarity=0.358 Sum_probs=38.2
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFS 213 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~ 213 (224)
+..+||..++++.+.+. +.++|.|+|...+++.+.+.++-...+.
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a 225 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA 225 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE
Confidence 56899999999999865 8999999999999999999876544333
No 33
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.41 E-value=0.21 Score=49.42 Aligned_cols=81 Identities=20% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-Cc
Q 027383 108 EIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FA 186 (224)
Q Consensus 108 ~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~f 186 (224)
...++.+.||+||||+.+.....++. + ... +..+-|++.+.|+++.+ -|
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~--------------------------~---~~d-~~~l~pgV~e~L~~L~~~Gy 214 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPK--------------------------G---PDD-WQIIFPEIPEKLKELEADGF 214 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCC--------------------------C---HHH-eeecccCHHHHHHHHHHCCC
Confidence 34678999999999997521000110 0 001 12235999999999985 59
Q ss_pred eEEEEcCCch------------hhHHHHHHhhCCCCccceeeecCC
Q 027383 187 DLVLFTAGLE------------GYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 187 EIvIFTAg~k------------~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
.|+|+|+... .+++.+++.++-. |+..+.-+.
T Consensus 215 ~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~ 258 (526)
T TIGR01663 215 KICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGA 258 (526)
T ss_pred EEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCC
Confidence 9999999777 4677788777543 554444333
No 34
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.06 E-value=0.22 Score=46.93 Aligned_cols=54 Identities=26% Similarity=0.223 Sum_probs=39.4
Q ss_pred CCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-CceE
Q 027383 110 EKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE-FADL 188 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse-~fEI 188 (224)
+|+.|+||=|+||+..... .|.. ...-.+...|++.++|+++.+ .+.+
T Consensus 1 ~~k~l~lDrDgtl~~~~~~-----------------~y~~--------------~~~~~~~l~pGV~e~L~~Lk~~G~kL 49 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPT-----------------DFQV--------------DSLDKLAFEPGVIPALLKLQKAGYKL 49 (354)
T ss_pred CCcEEEEeCCCCccCCCCc-----------------cccc--------------cCcccceECcCHHHHHHHHHhCCCeE
Confidence 4788999999999985310 0100 011136789999999999986 5999
Q ss_pred EEEcCC
Q 027383 189 VLFTAG 194 (224)
Q Consensus 189 vIFTAg 194 (224)
+|-|++
T Consensus 50 ~IvTNq 55 (354)
T PRK05446 50 VMVTNQ 55 (354)
T ss_pred EEEECC
Confidence 999994
No 35
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.94 E-value=0.17 Score=43.80 Aligned_cols=15 Identities=20% Similarity=0.129 Sum_probs=12.4
Q ss_pred CeeEEEeCCCceecc
Q 027383 111 KLTVVLDLDETLVCA 125 (224)
Q Consensus 111 KltLVLDLDETLVhs 125 (224)
-..+++|+||||.+.
T Consensus 8 ~~~~~~D~dG~l~~~ 22 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG 22 (242)
T ss_pred CCEEEEecccccccC
Confidence 447899999999874
No 36
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=93.90 E-value=0.12 Score=40.11 Aligned_cols=55 Identities=16% Similarity=0.329 Sum_probs=48.1
Q ss_pred EEEEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 167 VTVFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 167 v~V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
......|++.++|+.++ +.+.++|.|++...+++.+++.+.-..+|+..++.+++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~ 129 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDV 129 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGS
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchh
Confidence 35788999999999999 88999999999999999999999777778887776544
No 37
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.88 E-value=0.14 Score=42.40 Aligned_cols=37 Identities=16% Similarity=0.356 Sum_probs=29.5
Q ss_pred ccCHHHHHHHhhhC-ceEEEEcCCc-hhhHHHHHHhhCC
Q 027383 172 RPGLHEFLKKLAEF-ADLVLFTAGL-EGYARPLVDKIDR 208 (224)
Q Consensus 172 RPgL~EFL~~lse~-fEIvIFTAg~-k~YA~~Vld~IDP 208 (224)
-|++.++|+++.+. +.++|.|++. ...++.+++.++-
T Consensus 45 ~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 45 YPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred ChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 47888999999865 8999999998 6777777776653
No 38
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.61 E-value=0.14 Score=42.62 Aligned_cols=26 Identities=31% Similarity=0.416 Sum_probs=20.5
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAG 194 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg 194 (224)
..+-|++.+-|+++.+ -|.|+|+|+.
T Consensus 28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 28 KFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp EEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred hhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 4456789999999985 6999999986
No 39
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=93.51 E-value=0.12 Score=43.22 Aligned_cols=54 Identities=19% Similarity=0.248 Sum_probs=46.5
Q ss_pred EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
++...||+.++|+++.+. +.+.|.|++...++...++.++-.++|+..+..+..
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~ 146 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE 146 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC
Confidence 357899999999999876 999999999999999999998877788887766543
No 40
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.61 E-value=0.3 Score=37.53 Aligned_cols=30 Identities=40% Similarity=0.533 Sum_probs=23.1
Q ss_pred cCHHHHHHHhhhC-ceEEEEcCCc----hhhHHHH
Q 027383 173 PGLHEFLKKLAEF-ADLVLFTAGL----EGYARPL 202 (224)
Q Consensus 173 PgL~EFL~~lse~-fEIvIFTAg~----k~YA~~V 202 (224)
||..||++++.+. ..+++.|+++ +.|++++
T Consensus 17 pga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 17 PGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 7888999999865 8999999998 4555555
No 41
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.41 E-value=0.31 Score=42.93 Aligned_cols=15 Identities=53% Similarity=0.556 Sum_probs=13.1
Q ss_pred CeeEEEeCCCceecc
Q 027383 111 KLTVVLDLDETLVCA 125 (224)
Q Consensus 111 KltLVLDLDETLVhs 125 (224)
.+.+++||||||+..
T Consensus 4 ~kli~~DlDGTLl~~ 18 (273)
T PRK00192 4 KLLVFTDLDGTLLDH 18 (273)
T ss_pred ceEEEEcCcccCcCC
Confidence 568999999999974
No 42
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=92.27 E-value=0.21 Score=41.33 Aligned_cols=47 Identities=28% Similarity=0.422 Sum_probs=40.1
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLR 215 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R 215 (224)
+..+||+.++|+.+.+.+.++|-|++...+++.+++.++-..+|.++
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~ 113 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHS 113 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcce
Confidence 45689999999999877999999999999999999998755555443
No 43
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=92.08 E-value=0.24 Score=42.56 Aligned_cols=48 Identities=21% Similarity=0.361 Sum_probs=42.3
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL 216 (224)
+..+||..+|++.+.+.+.++|-|++...+++++++.+.-+.+|.+++
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l 114 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKL 114 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceee
Confidence 467999999999999888999999999999999999988766676553
No 44
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=91.99 E-value=0.58 Score=38.16 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=31.8
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLF 212 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F 212 (224)
+.++|+. -++++.+ .+.+.|-|+..+..++.+++.+.-..+|
T Consensus 29 ~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~ 71 (154)
T TIGR01670 29 FNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY 71 (154)
T ss_pred EechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE
Confidence 3556665 6777775 5899999999999999999887654444
No 45
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.78 E-value=0.33 Score=38.89 Aligned_cols=48 Identities=31% Similarity=0.574 Sum_probs=40.0
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL 216 (224)
+..+|+..++++++.+ -+.++|.|++.+.|++++++.+.-..+|+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~ 120 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRL 120 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeE
Confidence 5579999999999975 48999999999999999999886555555443
No 46
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=91.71 E-value=0.37 Score=39.86 Aligned_cols=53 Identities=26% Similarity=0.245 Sum_probs=44.8
Q ss_pred EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
.+..+||+.++|+.+.+. +.+.|.|++.+.+++.+++.++=.++|+..+..+.
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~ 136 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDS 136 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCC
Confidence 367899999999999854 89999999999999999999877677777665543
No 47
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=91.63 E-value=0.47 Score=39.13 Aligned_cols=13 Identities=38% Similarity=0.475 Sum_probs=11.3
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
|++||||||++..
T Consensus 1 i~~DlDGTLl~~~ 13 (254)
T PF08282_consen 1 IFSDLDGTLLNSD 13 (254)
T ss_dssp EEEECCTTTCSTT
T ss_pred cEEEECCceecCC
Confidence 6899999999854
No 48
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=91.56 E-value=0.41 Score=39.05 Aligned_cols=47 Identities=17% Similarity=0.270 Sum_probs=40.4
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLR 215 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R 215 (224)
+..+||+.++|+.+.+ -+.++|-|++...+++.+++.+.-..+|...
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~ 126 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNE 126 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEE
Confidence 5679999999999975 5999999999999999999998765556544
No 49
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=91.29 E-value=0.36 Score=40.96 Aligned_cols=42 Identities=24% Similarity=0.407 Sum_probs=37.7
Q ss_pred EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCC
Q 027383 168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRE 209 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~ 209 (224)
.+..|||..+||+.+.+ ...++|.|++.+.|++++++.+...
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~ 110 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK 110 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc
Confidence 47899999999999987 4999999999999999999988543
No 50
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=91.24 E-value=0.42 Score=39.70 Aligned_cols=53 Identities=17% Similarity=0.147 Sum_probs=46.4
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+..+||..++|+++.+.+.++|-|++.+.+++.+++.+.=.++|++.+..+.+
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~ 148 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA 148 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc
Confidence 67899999999999977999999999999999999988776778887776554
No 51
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=90.90 E-value=0.63 Score=38.99 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=46.9
Q ss_pred EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
.+...||+.++|+.+.+ .+.+.|-|++.+.+++.+++.++=.++|+..+..+++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~ 134 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDV 134 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcC
Confidence 35678999999999985 5899999999999999999999877788888776665
No 52
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=90.73 E-value=0.43 Score=39.40 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=44.0
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
+...|++.++|+++.+. +.++|-|++...+++.+++.+.=.++|+..+..++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~ 143 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADA 143 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhh
Confidence 45679999999999986 99999999999999999998765557877766554
No 53
>PRK09449 dUMP phosphatase; Provisional
Probab=90.65 E-value=0.38 Score=40.41 Aligned_cols=53 Identities=17% Similarity=0.275 Sum_probs=45.8
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+...||+.++|+++.+.+-+.|-|++.+.+++.+++.+.-.++|+..+..+++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~ 146 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV 146 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc
Confidence 45789999999999988999999999999999999988777778877766554
No 54
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=90.65 E-value=0.65 Score=38.71 Aligned_cols=52 Identities=23% Similarity=0.273 Sum_probs=43.7
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
...+||+.++|+.+.+ .+.++|.|++.+.+++.+++.++=.++|+..+..++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~ 144 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDS 144 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCC
Confidence 6689999999999985 589999999999999999999876667776555443
No 55
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=90.60 E-value=0.47 Score=43.36 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=12.7
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++|+||||+++.
T Consensus 1 ~~~ifD~DGvL~~g~ 15 (321)
T TIGR01456 1 FGFAFDIDGVLFRGK 15 (321)
T ss_pred CEEEEeCcCceECCc
Confidence 468999999999863
No 56
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=90.44 E-value=0.72 Score=40.01 Aligned_cols=17 Identities=29% Similarity=0.272 Sum_probs=14.3
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
..+.+++||||||+...
T Consensus 2 ~~kli~~DlDGTLl~~~ 18 (264)
T COG0561 2 MIKLLAFDLDGTLLDSN 18 (264)
T ss_pred CeeEEEEcCCCCccCCC
Confidence 36789999999999864
No 57
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.43 E-value=0.5 Score=42.66 Aligned_cols=48 Identities=21% Similarity=0.216 Sum_probs=41.2
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLY 217 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy 217 (224)
++-=|-|+++|-.+.+.+ .++||+|.+..|..++.+|--...|....|
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieDcFegii~ 146 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIEDCFEGIIC 146 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHHhccceeE
Confidence 677788999999999888 999999999999999999977766666544
No 58
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=90.37 E-value=0.53 Score=41.92 Aligned_cols=53 Identities=21% Similarity=0.351 Sum_probs=46.4
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+...||+.++|+++.+. +-++|-|++.+.+++.+++.++-.++|+..+..+.+
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~ 161 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDV 161 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccC
Confidence 55789999999999854 999999999999999999998766788888877665
No 59
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=90.07 E-value=0.67 Score=38.59 Aligned_cols=54 Identities=22% Similarity=0.194 Sum_probs=46.2
Q ss_pred EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
.+...||..++|+++.+ .+.++|.|++...+++.+++.++-.++|+..+..+++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~ 127 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV 127 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC
Confidence 35678999999999975 5899999999999999999998887788877766554
No 60
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=90.04 E-value=0.63 Score=40.56 Aligned_cols=53 Identities=11% Similarity=0.092 Sum_probs=46.8
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+...||+.++|+++.+ -+.+.|-|++.+.+++.+++.++-.++|+..+..+++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~ 160 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSEC 160 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcC
Confidence 5678999999999964 5999999999999999999999887889888877765
No 61
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=90.02 E-value=0.44 Score=40.52 Aligned_cols=38 Identities=24% Similarity=0.478 Sum_probs=35.1
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhh
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKI 206 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~I 206 (224)
+..+||..|||+++.+ -+.++|-|++...|++++++.+
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 6789999999999985 4999999999999999999986
No 62
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=89.83 E-value=0.86 Score=38.38 Aligned_cols=14 Identities=36% Similarity=0.432 Sum_probs=11.8
Q ss_pred eeEEEeCCCceecc
Q 027383 112 LTVVLDLDETLVCA 125 (224)
Q Consensus 112 ltLVLDLDETLVhs 125 (224)
+.+++||||||+..
T Consensus 2 k~v~~DlDGTLl~~ 15 (215)
T TIGR01487 2 KLVAIDIDGTLTEP 15 (215)
T ss_pred cEEEEecCCCcCCC
Confidence 47899999999954
No 63
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=89.82 E-value=0.7 Score=38.66 Aligned_cols=47 Identities=23% Similarity=0.366 Sum_probs=40.4
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCcccee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLR 215 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~R 215 (224)
+..+||+.+||+.+.+ -+.++|-|+|...+++.+++.+.-..+|+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~ 131 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANR 131 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeE
Confidence 4679999999999986 5999999999999999999998665566543
No 64
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=89.66 E-value=0.83 Score=38.45 Aligned_cols=13 Identities=46% Similarity=0.462 Sum_probs=11.2
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
+++||||||+...
T Consensus 2 i~~DlDGTLL~~~ 14 (221)
T TIGR02463 2 VFSDLDGTLLDSH 14 (221)
T ss_pred EEEeCCCCCcCCC
Confidence 7899999999753
No 65
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=89.64 E-value=0.78 Score=36.63 Aligned_cols=51 Identities=22% Similarity=0.353 Sum_probs=41.0
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
+...||+.++|+++.+ -+.++|.|++...+ ..++..++-.++|+..++.+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~ 135 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGD 135 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCC
Confidence 5678999999999986 58999999999999 776666666667877766443
No 66
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=89.38 E-value=0.27 Score=44.94 Aligned_cols=38 Identities=13% Similarity=0.272 Sum_probs=24.9
Q ss_pred EeccCHHHHHHHhhhCceEEEEcCCc-hhh-HHHHHHhhC
Q 027383 170 FERPGLHEFLKKLAEFADLVLFTAGL-EGY-ARPLVDKID 207 (224)
Q Consensus 170 ~~RPgL~EFL~~lse~fEIvIFTAg~-k~Y-A~~Vld~ID 207 (224)
+.=||..|||+++.++--.|.|-+.. ++- .+.-++.|-
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk 161 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLK 161 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHH
Confidence 44599999999999887666665443 333 344455444
No 67
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=89.29 E-value=0.74 Score=39.96 Aligned_cols=12 Identities=42% Similarity=0.556 Sum_probs=10.8
Q ss_pred EEEeCCCceecc
Q 027383 114 VVLDLDETLVCA 125 (224)
Q Consensus 114 LVLDLDETLVhs 125 (224)
+++||||||++.
T Consensus 2 i~~DlDGTLl~~ 13 (225)
T TIGR02461 2 IFTDLDGTLLPP 13 (225)
T ss_pred EEEeCCCCCcCC
Confidence 689999999984
No 68
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=89.09 E-value=0.89 Score=39.97 Aligned_cols=18 Identities=33% Similarity=0.397 Sum_probs=15.2
Q ss_pred CCCeeEEEeCCCceeccc
Q 027383 109 IEKLTVVLDLDETLVCAY 126 (224)
Q Consensus 109 ~~KltLVLDLDETLVhs~ 126 (224)
+.++.+++||||||++..
T Consensus 5 ~~~~lI~~DlDGTLL~~~ 22 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSH 22 (271)
T ss_pred CCCeEEEEeCccCCcCCC
Confidence 457889999999999863
No 69
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=88.86 E-value=0.66 Score=42.52 Aligned_cols=49 Identities=18% Similarity=0.386 Sum_probs=40.5
Q ss_pred EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhC---CC-Cccceee
Q 027383 168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKID---RE-NLFSLRL 216 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~ID---P~-~~F~~RL 216 (224)
-+..|||+.+|++.+.+. ..++|+|+|...+++.+++.+. +. .++++++
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L 172 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFM 172 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeE
Confidence 478899999999999755 8999999999999999999743 33 3566664
No 70
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=88.26 E-value=1 Score=37.30 Aligned_cols=12 Identities=42% Similarity=0.609 Sum_probs=10.7
Q ss_pred EEEeCCCceecc
Q 027383 114 VVLDLDETLVCA 125 (224)
Q Consensus 114 LVLDLDETLVhs 125 (224)
+++|+||||+..
T Consensus 2 i~~D~DgTL~~~ 13 (204)
T TIGR01484 2 LFFDLDGTLLDP 13 (204)
T ss_pred EEEeCcCCCcCC
Confidence 789999999964
No 71
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=88.15 E-value=1.8 Score=37.54 Aligned_cols=16 Identities=25% Similarity=0.339 Sum_probs=13.4
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
.+.+++||||||++..
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (270)
T PRK10513 3 IKLIAIDMDGTLLLPD 18 (270)
T ss_pred eEEEEEecCCcCcCCC
Confidence 4688999999999753
No 72
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=87.72 E-value=0.98 Score=39.23 Aligned_cols=13 Identities=38% Similarity=0.455 Sum_probs=11.4
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
+++||||||++..
T Consensus 2 i~~DlDGTll~~~ 14 (256)
T TIGR01486 2 IFTDLDGTLLDPH 14 (256)
T ss_pred EEEcCCCCCcCCC
Confidence 7899999999864
No 73
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=87.57 E-value=1.5 Score=38.76 Aligned_cols=15 Identities=27% Similarity=0.297 Sum_probs=12.6
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++|+||||++..
T Consensus 2 k~i~~D~DGtl~~~~ 16 (257)
T TIGR01458 2 KGVLLDISGVLYISD 16 (257)
T ss_pred CEEEEeCCCeEEeCC
Confidence 478999999999763
No 74
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=87.41 E-value=1.6 Score=37.78 Aligned_cols=20 Identities=40% Similarity=0.282 Sum_probs=16.6
Q ss_pred CCCCCCeeEEEeCCCceecc
Q 027383 106 GQEIEKLTVVLDLDETLVCA 125 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs 125 (224)
....+-+.+++|||+|||--
T Consensus 23 L~~~Gikgvi~DlDNTLv~w 42 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPW 42 (175)
T ss_pred HHHcCCcEEEEeccCceecc
Confidence 45567899999999999954
No 75
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=87.34 E-value=0.59 Score=38.25 Aligned_cols=50 Identities=22% Similarity=0.346 Sum_probs=41.9
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
+...||+.++|+++. +.++|.|++.+.+++.+++.++-.++|+..+..+.
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~ 132 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDT 132 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeec
Confidence 446799999999998 68999999999999999999876667887765543
No 76
>PRK10444 UMP phosphatase; Provisional
Probab=87.16 E-value=1.6 Score=38.69 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=12.6
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++|+||||++..
T Consensus 2 ~~v~~DlDGtL~~~~ 16 (248)
T PRK10444 2 KNVICDIDGVLMHDN 16 (248)
T ss_pred cEEEEeCCCceEeCC
Confidence 368999999999864
No 77
>PLN02645 phosphoglycolate phosphatase
Probab=87.07 E-value=1.4 Score=40.09 Aligned_cols=15 Identities=20% Similarity=0.184 Sum_probs=12.9
Q ss_pred CeeEEEeCCCceecc
Q 027383 111 KLTVVLDLDETLVCA 125 (224)
Q Consensus 111 KltLVLDLDETLVhs 125 (224)
-..+++|+||||++.
T Consensus 28 ~~~~~~D~DGtl~~~ 42 (311)
T PLN02645 28 VETFIFDCDGVIWKG 42 (311)
T ss_pred CCEEEEeCcCCeEeC
Confidence 458899999999975
No 78
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=87.03 E-value=1.2 Score=35.87 Aligned_cols=48 Identities=21% Similarity=0.426 Sum_probs=40.9
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL 216 (224)
+..+|++.++|+.+.+ .+.++|-|++...+++.+++.++-..+|+..+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~ 119 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIY 119 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEe
Confidence 6789999999999976 48999999999999999999876555565554
No 79
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=86.83 E-value=1.5 Score=37.89 Aligned_cols=12 Identities=42% Similarity=0.689 Sum_probs=10.8
Q ss_pred EEEeCCCceecc
Q 027383 114 VVLDLDETLVCA 125 (224)
Q Consensus 114 LVLDLDETLVhs 125 (224)
+++||||||+..
T Consensus 2 i~~DlDGTLl~~ 13 (256)
T TIGR00099 2 IFIDLDGTLLND 13 (256)
T ss_pred EEEeCCCCCCCC
Confidence 789999999975
No 80
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=86.74 E-value=1.8 Score=38.62 Aligned_cols=49 Identities=14% Similarity=0.216 Sum_probs=36.5
Q ss_pred eccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCc--cceeeecC
Q 027383 171 ERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENL--FSLRLYRP 219 (224)
Q Consensus 171 ~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~--F~~RLyRd 219 (224)
--|+..+|++++.+ -++|++-|.-.+...+...+.|.-.|+ +++-+.|+
T Consensus 121 aip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 121 ALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecC
Confidence 46889999999864 588888898888887777777766653 35556664
No 81
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=86.72 E-value=1.4 Score=37.21 Aligned_cols=52 Identities=15% Similarity=0.050 Sum_probs=45.1
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
....||+.++|+.+.+ -+.++|.|++...+++.+++.+.-.++|+..+.++.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~ 143 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEK 143 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEccc
Confidence 4577999999999985 599999999999999999999887778888776654
No 82
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=86.60 E-value=2.6 Score=35.27 Aligned_cols=29 Identities=7% Similarity=0.135 Sum_probs=19.3
Q ss_pred hCceEEEEcCCchhhHHHHHHhhCCCCcc
Q 027383 184 EFADLVLFTAGLEGYARPLVDKIDRENLF 212 (224)
Q Consensus 184 e~fEIvIFTAg~k~YA~~Vld~IDP~~~F 212 (224)
+-++++|-|+.....+.++++.+.-..+|
T Consensus 63 ~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f 91 (183)
T PRK09484 63 SGIEVAIITGRKSKLVEDRMTTLGITHLY 91 (183)
T ss_pred CCCEEEEEeCCCcHHHHHHHHHcCCceee
Confidence 45777777777777777777776543333
No 83
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=85.98 E-value=2.6 Score=36.26 Aligned_cols=16 Identities=38% Similarity=0.449 Sum_probs=13.3
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
.+.+++||||||+...
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (272)
T PRK10530 3 YRVIALDLDGTLLTPK 18 (272)
T ss_pred ccEEEEeCCCceECCC
Confidence 4688999999999653
No 84
>PRK06769 hypothetical protein; Validated
Probab=85.55 E-value=1.5 Score=36.40 Aligned_cols=27 Identities=22% Similarity=0.107 Sum_probs=22.9
Q ss_pred EeccCHHHHHHHhhh-CceEEEEcCCch
Q 027383 170 FERPGLHEFLKKLAE-FADLVLFTAGLE 196 (224)
Q Consensus 170 ~~RPgL~EFL~~lse-~fEIvIFTAg~k 196 (224)
..-|++.++|+++.+ -+.+.|-|++..
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 456999999999975 589999999874
No 85
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=85.43 E-value=2.4 Score=35.62 Aligned_cols=16 Identities=19% Similarity=0.266 Sum_probs=13.1
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
.+.+++||||||+...
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (230)
T PRK01158 3 IKAIAIDIDGTITDKD 18 (230)
T ss_pred eeEEEEecCCCcCCCC
Confidence 3678999999999653
No 86
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=85.12 E-value=1.9 Score=36.07 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=43.4
Q ss_pred EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCC--CccceeeecC
Q 027383 169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRE--NLFSLRLYRP 219 (224)
Q Consensus 169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~RLyRd 219 (224)
....||+.++|+++. +.+.+.|-|++.+.+++.+++.++-. ++|+..+..+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~ 139 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPS 139 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCC
Confidence 468899999999997 56999999999999999999998765 6777666544
No 87
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=84.98 E-value=1.2 Score=35.86 Aligned_cols=50 Identities=20% Similarity=0.260 Sum_probs=40.2
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
+...||+.++|+++.+. +.+.|-|++ .+++.+++...-.++|+..+..+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~ 137 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADE 137 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhh
Confidence 67899999999999864 888888887 789999988766667777665543
No 88
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=84.92 E-value=1.4 Score=36.38 Aligned_cols=48 Identities=21% Similarity=0.284 Sum_probs=40.8
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRL 216 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RL 216 (224)
...+|+..++++.+.+ -+.++|-|++...+++++++.+.-+++|..++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l 134 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRL 134 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecce
Confidence 4579999999999975 58999999999999999999987766666543
No 89
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=84.85 E-value=2.2 Score=36.78 Aligned_cols=53 Identities=9% Similarity=-0.005 Sum_probs=44.1
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCcc-ceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLF-SLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F-~~RLyRdsC 221 (224)
+...||+.++|+++.+. +.+.|-|++.+.+++.+++.+.-.++| +..+..+..
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~ 152 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV 152 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC
Confidence 46789999999999764 999999999999999999998777764 666666553
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=83.93 E-value=2.9 Score=35.85 Aligned_cols=54 Identities=15% Similarity=0.076 Sum_probs=44.3
Q ss_pred EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
.+...||+.++|+++.+. +.+.|-|++...+++.+++.++-.++|+.....+++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~ 147 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL 147 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC
Confidence 357799999999999865 899999999999999999988766677766665543
No 91
>PLN02954 phosphoserine phosphatase
Probab=83.90 E-value=2.4 Score=35.54 Aligned_cols=46 Identities=26% Similarity=0.416 Sum_probs=38.3
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCC--Cccce
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRE--NLFSL 214 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~ 214 (224)
...+||+.|+|+.+.+ ...++|-|++.+.+++.+++.+.-. ++|..
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~ 131 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFAN 131 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEe
Confidence 4578999999999975 4899999999999999999997533 45654
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=83.87 E-value=3.4 Score=42.61 Aligned_cols=31 Identities=23% Similarity=0.029 Sum_probs=22.1
Q ss_pred CCCCCCCCCCCCCCCCeeEEEeCCCceeccc
Q 027383 96 LSDDCGGGGDGQEIEKLTVVLDLDETLVCAY 126 (224)
Q Consensus 96 ~~~~~~~~~~~~~~~KltLVLDLDETLVhs~ 126 (224)
|++...+--......++.++.||||||++..
T Consensus 401 ~~~~~~~~~~~~~~~~KLIfsDLDGTLLd~d 431 (694)
T PRK14502 401 SRAARPSRLPSSGQFKKIVYTDLDGTLLNPL 431 (694)
T ss_pred chhhhcccCCCcCceeeEEEEECcCCCcCCC
Confidence 3344444444666788899999999999753
No 93
>PHA02597 30.2 hypothetical protein; Provisional
Probab=83.66 E-value=0.65 Score=38.39 Aligned_cols=52 Identities=21% Similarity=0.101 Sum_probs=35.7
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCC----ccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDREN----LFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~----~F~~RLyRds 220 (224)
+...||+.++|+++.+.+.+++-|++.......+.+.+.-.+ +|++.+.-++
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~ 128 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH 128 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc
Confidence 567999999999999878887777776665555665553322 4555554443
No 94
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=83.57 E-value=2.8 Score=36.54 Aligned_cols=15 Identities=27% Similarity=0.335 Sum_probs=12.7
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++||||||+...
T Consensus 3 kli~~DlDGTLl~~~ 17 (272)
T PRK15126 3 RLAAFDMDGTLLMPD 17 (272)
T ss_pred cEEEEeCCCcCcCCC
Confidence 578999999999753
No 95
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=83.49 E-value=1.8 Score=41.26 Aligned_cols=52 Identities=15% Similarity=0.231 Sum_probs=44.6
Q ss_pred EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
+...||+.|+|+++. +.+.+.|-|++.+.+++.+++.++=.++|+..+..+.
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~ 381 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQ 381 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCC
Confidence 567899999999997 4599999999999999999999877777877766554
No 96
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=83.43 E-value=0.71 Score=37.51 Aligned_cols=51 Identities=14% Similarity=0.066 Sum_probs=42.6
Q ss_pred EeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 170 FERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 170 ~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
..-|+ .+.|+.+.+.+.+.|-|++.+.+++.+++.+.=.++|+..+..+++
T Consensus 88 ~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~ 138 (188)
T PRK10725 88 EPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDV 138 (188)
T ss_pred CCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhc
Confidence 34565 4889999877899999999999999999998777788888877664
No 97
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=83.02 E-value=2.4 Score=37.66 Aligned_cols=53 Identities=23% Similarity=0.342 Sum_probs=44.0
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+..+||+.++|+.+.+ .+.++|.|++.+.+++.+++.++-.++|+..+..+.+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~ 153 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTL 153 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCC
Confidence 4578999999999975 6899999999999999999987766677776665543
No 98
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=82.88 E-value=3 Score=36.99 Aligned_cols=14 Identities=21% Similarity=0.240 Sum_probs=11.8
Q ss_pred eeEEEeCCCceecc
Q 027383 112 LTVVLDLDETLVCA 125 (224)
Q Consensus 112 ltLVLDLDETLVhs 125 (224)
..+++|+||||++.
T Consensus 3 ~~~~~D~DGtl~~~ 16 (279)
T TIGR01452 3 QGFIFDCDGVLWLG 16 (279)
T ss_pred cEEEEeCCCceEcC
Confidence 36889999999874
No 99
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=82.64 E-value=2.7 Score=34.77 Aligned_cols=28 Identities=21% Similarity=0.402 Sum_probs=16.9
Q ss_pred ccCHHHHHHHhhhC-ceEEEEcCCchhhH
Q 027383 172 RPGLHEFLKKLAEF-ADLVLFTAGLEGYA 199 (224)
Q Consensus 172 RPgL~EFL~~lse~-fEIvIFTAg~k~YA 199 (224)
.|+..++++++.+. +.+++-|+....-+
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~ 57 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQA 57 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHH
Confidence 58888888888765 44444444443433
No 100
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=82.56 E-value=3 Score=32.76 Aligned_cols=52 Identities=21% Similarity=0.152 Sum_probs=40.5
Q ss_pred EEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
....||+.++|+.+. +.+.+.|.|++.+.+++.+++.. -...|...+..+++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~ 115 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEF 115 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCC
Confidence 445699999999996 45899999999999999999984 22356665555543
No 101
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=82.40 E-value=2.4 Score=40.56 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=47.1
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~ 222 (224)
+...||+.|||+.+.+ .+.+.|-|++.+.+++.+++.++=.++|+..+..+++.
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~ 269 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY 269 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC
Confidence 4567999999999975 59999999999999999999988777899888877653
No 102
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=82.38 E-value=2.4 Score=36.82 Aligned_cols=51 Identities=18% Similarity=0.334 Sum_probs=44.7
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP 219 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd 219 (224)
..++||..|.++.+.+. +.++|.|+|-..++++|.+.+.-+..+.+++-.+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~ 127 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEID 127 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEe
Confidence 78899999999999976 9999999999999999999998876666665444
No 103
>PRK11587 putative phosphatase; Provisional
Probab=82.34 E-value=0.75 Score=38.89 Aligned_cols=51 Identities=14% Similarity=0.022 Sum_probs=37.8
Q ss_pred EEEeccCHHHHHHHhh-hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383 168 TVFERPGLHEFLKKLA-EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP 219 (224)
Q Consensus 168 ~V~~RPgL~EFL~~ls-e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd 219 (224)
.+...||+.++|+.+. +.+.+.|-|++...+++.+++...- ..|...+..+
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~ 132 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAE 132 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHH
Confidence 3567899999999997 4599999999999988877765542 2344444433
No 104
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=81.12 E-value=0.91 Score=38.01 Aligned_cols=16 Identities=44% Similarity=0.505 Sum_probs=13.9
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
...+++|+||||+++.
T Consensus 3 ~~~viFD~DGTL~ds~ 18 (214)
T PRK13288 3 INTVLFDLDGTLINTN 18 (214)
T ss_pred ccEEEEeCCCcCccCH
Confidence 4689999999999975
No 105
>PRK11590 hypothetical protein; Provisional
Probab=81.05 E-value=0.96 Score=38.45 Aligned_cols=39 Identities=23% Similarity=0.125 Sum_probs=33.6
Q ss_pred EEeccCHHHHH-HHhh-hCceEEEEcCCchhhHHHHHHhhC
Q 027383 169 VFERPGLHEFL-KKLA-EFADLVLFTAGLEGYARPLVDKID 207 (224)
Q Consensus 169 V~~RPgL~EFL-~~ls-e~fEIvIFTAg~k~YA~~Vld~ID 207 (224)
+..+|+..|.| +.+. +-+.++|-|++.+.|++++++.+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5676 588999999999999999998755
No 106
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=80.82 E-value=0.94 Score=37.78 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=13.7
Q ss_pred eeEEEeCCCceecccc
Q 027383 112 LTVVLDLDETLVCAYE 127 (224)
Q Consensus 112 ltLVLDLDETLVhs~e 127 (224)
..+++|+||||+.+..
T Consensus 3 ~~viFDlDGTL~ds~~ 18 (221)
T TIGR02253 3 KAIFFDLDDTLIDTSG 18 (221)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 4789999999999753
No 107
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=80.76 E-value=4.1 Score=34.78 Aligned_cols=21 Identities=24% Similarity=0.293 Sum_probs=16.4
Q ss_pred CCCCCCeeEEEeCCCceeccc
Q 027383 106 GQEIEKLTVVLDLDETLVCAY 126 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs~ 126 (224)
....+=+.||+|+|+||+.-+
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~ 56 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY 56 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC
Confidence 445567889999999998544
No 108
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=80.74 E-value=0.77 Score=41.24 Aligned_cols=49 Identities=16% Similarity=0.225 Sum_probs=41.5
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLY 217 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy 217 (224)
+..-||+.++|+++.+ .+.+.|-|++.+.+++.+++.++-.++|+..+.
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~ 190 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQA 190 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEe
Confidence 4557999999999985 589999999999999999999887667765543
No 109
>PRK10976 putative hydrolase; Provisional
Probab=80.74 E-value=4.2 Score=35.16 Aligned_cols=15 Identities=40% Similarity=0.408 Sum_probs=12.9
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++||||||+...
T Consensus 3 kli~~DlDGTLl~~~ 17 (266)
T PRK10976 3 QVVASDLDGTLLSPD 17 (266)
T ss_pred eEEEEeCCCCCcCCC
Confidence 578999999999764
No 110
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=80.63 E-value=0.89 Score=37.75 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=41.5
Q ss_pred eccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 171 ERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 171 ~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
..|+..++|+.+.+. +.+.|-|++.+.+++.+++.+.=..+|+..+..++
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~ 157 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED 157 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC
Confidence 344569999999865 89999999999999999999876677877776654
No 111
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=80.48 E-value=3.4 Score=34.50 Aligned_cols=13 Identities=31% Similarity=0.378 Sum_probs=10.9
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
+++||||||+...
T Consensus 1 i~~DlDGTLl~~~ 13 (225)
T TIGR01482 1 IASDIDGTLTDPN 13 (225)
T ss_pred CeEeccCccCCCC
Confidence 5899999999753
No 112
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=80.43 E-value=0.94 Score=37.04 Aligned_cols=14 Identities=36% Similarity=0.320 Sum_probs=12.1
Q ss_pred eEEEeCCCceeccc
Q 027383 113 TVVLDLDETLVCAY 126 (224)
Q Consensus 113 tLVLDLDETLVhs~ 126 (224)
.+++||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999764
No 113
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=80.00 E-value=2.4 Score=37.71 Aligned_cols=39 Identities=23% Similarity=0.557 Sum_probs=35.9
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhC
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKID 207 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~ID 207 (224)
+++|||.+||.+++.++ -.++|-++|..-|.+++++.|=
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv 111 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV 111 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc
Confidence 78999999999999965 7899999999999999999874
No 114
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=79.85 E-value=2.9 Score=35.94 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=43.2
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
+...||+.++|+.+.+ -+-+.|-|++.+.+++..++.+.=.++|++.+..++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~ 144 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHT 144 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeee
Confidence 5678999999999986 589999999999999999988765557877765543
No 115
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=79.81 E-value=4.5 Score=33.51 Aligned_cols=14 Identities=29% Similarity=0.456 Sum_probs=12.0
Q ss_pred eEEEeCCCceeccc
Q 027383 113 TVVLDLDETLVCAY 126 (224)
Q Consensus 113 tLVLDLDETLVhs~ 126 (224)
.+++|+||||+.+.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 47999999999874
No 116
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=79.80 E-value=1.6 Score=38.01 Aligned_cols=16 Identities=31% Similarity=0.312 Sum_probs=13.7
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
-+.+++||||||+.+.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3579999999999874
No 117
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=79.46 E-value=3.3 Score=34.42 Aligned_cols=53 Identities=17% Similarity=0.180 Sum_probs=44.1
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+..-|++.++|+++.+.|.++|.|+|...++...+..+-=..+|++.+..+..
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~ 150 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDV 150 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccc
Confidence 67789999999999988999999999999999999987644467777665543
No 118
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=79.24 E-value=1.2 Score=37.37 Aligned_cols=15 Identities=40% Similarity=0.277 Sum_probs=13.1
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+++++|+||||+.+.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 578999999999874
No 119
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=78.94 E-value=3.9 Score=35.39 Aligned_cols=14 Identities=57% Similarity=0.702 Sum_probs=12.2
Q ss_pred CeeEEEeCCCceec
Q 027383 111 KLTVVLDLDETLVC 124 (224)
Q Consensus 111 KltLVLDLDETLVh 124 (224)
++.|+.||||||+.
T Consensus 1 ~~li~tDlDGTLl~ 14 (249)
T TIGR01485 1 RLLLVSDLDNTLVD 14 (249)
T ss_pred CeEEEEcCCCcCcC
Confidence 46789999999995
No 120
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=78.90 E-value=5.1 Score=35.70 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=13.9
Q ss_pred CCeeEEEeCCCceecc
Q 027383 110 EKLTVVLDLDETLVCA 125 (224)
Q Consensus 110 ~KltLVLDLDETLVhs 125 (224)
++..+++|+||||+..
T Consensus 13 ~~~li~~D~DGTLl~~ 28 (266)
T PRK10187 13 ANYAWFFDLDGTLAEI 28 (266)
T ss_pred CCEEEEEecCCCCCCC
Confidence 3789999999999974
No 121
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.32 E-value=3.1 Score=33.76 Aligned_cols=16 Identities=19% Similarity=0.328 Sum_probs=13.8
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
-+.+++|+||||+.+.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4678999999999874
No 122
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=78.30 E-value=1.3 Score=36.68 Aligned_cols=50 Identities=18% Similarity=0.113 Sum_probs=38.5
Q ss_pred EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
..-|++.++|+++.+. +.++|.|++...+ +.+++.+.=.++|+..+..++
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~fd~i~~s~~ 155 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLEYFDFVVTSYE 155 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHHhcceEEeecc
Confidence 5679999999999865 8999999998764 777777655556777665444
No 123
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=78.27 E-value=1.1 Score=38.41 Aligned_cols=16 Identities=38% Similarity=0.451 Sum_probs=13.7
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
.+.+++|+||||+.+.
T Consensus 12 ~k~viFD~DGTL~Ds~ 27 (229)
T PRK13226 12 PRAVLFDLDGTLLDSA 27 (229)
T ss_pred CCEEEEcCcCccccCH
Confidence 3589999999999974
No 124
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=78.19 E-value=1.2 Score=39.69 Aligned_cols=16 Identities=44% Similarity=0.463 Sum_probs=13.7
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
.+.+++||||||+.+.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 3489999999999974
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=77.95 E-value=1.2 Score=35.92 Aligned_cols=15 Identities=27% Similarity=0.441 Sum_probs=13.1
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++|+||||+.+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 468999999999874
No 126
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=77.49 E-value=6.6 Score=34.45 Aligned_cols=15 Identities=27% Similarity=0.284 Sum_probs=12.6
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
..+++|+||||++..
T Consensus 2 ~~~~~D~DGtl~~~~ 16 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK 16 (249)
T ss_pred CEEEEeCCCceEcCC
Confidence 368999999999764
No 127
>PTZ00174 phosphomannomutase; Provisional
Probab=77.45 E-value=1.6 Score=38.08 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=14.4
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
+.+.+++||||||++..
T Consensus 4 ~~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPR 20 (247)
T ss_pred CCeEEEEECcCCCcCCC
Confidence 46789999999999864
No 128
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=77.05 E-value=5 Score=36.66 Aligned_cols=17 Identities=24% Similarity=0.204 Sum_probs=13.8
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
+.....+||||||++-.
T Consensus 7 ~y~~~l~DlDGvl~~G~ 23 (269)
T COG0647 7 KYDGFLFDLDGVLYRGN 23 (269)
T ss_pred hcCEEEEcCcCceEeCC
Confidence 45578999999999853
No 129
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=76.59 E-value=1.5 Score=38.39 Aligned_cols=53 Identities=11% Similarity=-0.014 Sum_probs=43.2
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCc-cceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENL-FSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~-F~~RLyRdsC 221 (224)
+..-||+.++|+.+.+ -+.+.|-|++.+..++.+++.+.-.++ |+..+..+++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~ 154 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV 154 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC
Confidence 4568999999999975 599999999999999999998765565 4666666653
No 130
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=76.54 E-value=10 Score=32.84 Aligned_cols=49 Identities=24% Similarity=0.279 Sum_probs=32.2
Q ss_pred eccCHHHHHHHhhh-CceEEEEcC----CchhhH--------HHHHHhhCCCC-ccceeeecC
Q 027383 171 ERPGLHEFLKKLAE-FADLVLFTA----GLEGYA--------RPLVDKIDREN-LFSLRLYRP 219 (224)
Q Consensus 171 ~RPgL~EFL~~lse-~fEIvIFTA----g~k~YA--------~~Vld~IDP~~-~F~~RLyRd 219 (224)
+.|++.+=|..+.+ -|-+||+|+ ++..|. +.+.+.+--.+ .|+++++=.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cp 94 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCP 94 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECC
Confidence 46888888888864 599999999 333333 33445554555 477777633
No 131
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=76.36 E-value=5.5 Score=32.82 Aligned_cols=14 Identities=21% Similarity=0.218 Sum_probs=11.4
Q ss_pred eEEEeCCCceeccc
Q 027383 113 TVVLDLDETLVCAY 126 (224)
Q Consensus 113 tLVLDLDETLVhs~ 126 (224)
.+++||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 57899999999763
No 132
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=76.02 E-value=5.9 Score=35.59 Aligned_cols=17 Identities=29% Similarity=0.460 Sum_probs=14.7
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
.-+.+++||||||+.+.
T Consensus 61 ~~k~vIFDlDGTLiDS~ 77 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSL 77 (273)
T ss_pred hcCEEEECCcCccccCH
Confidence 46689999999999985
No 133
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=75.99 E-value=1.2 Score=44.33 Aligned_cols=20 Identities=40% Similarity=0.361 Sum_probs=16.3
Q ss_pred CCCCCCeeEEEeCCCceecc
Q 027383 106 GQEIEKLTVVLDLDETLVCA 125 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs 125 (224)
.....|+.||||||+||.--
T Consensus 217 ~~g~~kK~LVLDLDNTLWGG 236 (574)
T COG3882 217 MSGKSKKALVLDLDNTLWGG 236 (574)
T ss_pred hhCcccceEEEecCCccccc
Confidence 34447999999999999964
No 134
>PTZ00445 p36-lilke protein; Provisional
Probab=75.74 E-value=2.8 Score=37.52 Aligned_cols=62 Identities=16% Similarity=0.098 Sum_probs=42.5
Q ss_pred CCCCeeEEEeCCCcee--ccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhh-
Q 027383 108 EIEKLTVVLDLDETLV--CAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAE- 184 (224)
Q Consensus 108 ~~~KltLVLDLDETLV--hs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse- 184 (224)
..+=+.+++|+|.||| ||.- +.++ .++ ...+.-..||.++++++.+.+
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG------~~~~---~~~--------------------~~~~~~~~tpefk~~~~~l~~~ 90 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGG------YIDP---DND--------------------DIRVLTSVTPDFKILGKRLKNS 90 (219)
T ss_pred HcCCeEEEecchhhhhhhhccc------ccCC---Ccc--------------------hhhhhccCCHHHHHHHHHHHHC
Confidence 3467889999999999 5521 1000 000 112334579999999999985
Q ss_pred CceEEEEcCCchhh
Q 027383 185 FADLVLFTAGLEGY 198 (224)
Q Consensus 185 ~fEIvIFTAg~k~Y 198 (224)
.+.|+|-|-+.+.-
T Consensus 91 ~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 91 NIKISVVTFSDKEL 104 (219)
T ss_pred CCeEEEEEccchhh
Confidence 79999999988754
No 135
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=75.68 E-value=1.3 Score=34.92 Aligned_cols=14 Identities=36% Similarity=0.591 Sum_probs=12.2
Q ss_pred eEEEeCCCceeccc
Q 027383 113 TVVLDLDETLVCAY 126 (224)
Q Consensus 113 tLVLDLDETLVhs~ 126 (224)
++++|+||||+.+.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47999999999974
No 136
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=75.38 E-value=1.8 Score=37.01 Aligned_cols=49 Identities=20% Similarity=0.164 Sum_probs=43.4
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeee
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLY 217 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLy 217 (224)
...-||+.+.|..+++ -|.+.|-|+.....++.+++.++-..+|+....
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g 137 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG 137 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc
Confidence 4578999999999985 579999999999999999999888888877665
No 137
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=75.18 E-value=1.3 Score=34.22 Aligned_cols=13 Identities=46% Similarity=0.649 Sum_probs=11.4
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
|++|+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999864
No 138
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=75.10 E-value=1.6 Score=36.25 Aligned_cols=15 Identities=33% Similarity=0.490 Sum_probs=13.1
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++|+||||+.+.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 468999999999875
No 139
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=75.05 E-value=1.9 Score=37.18 Aligned_cols=15 Identities=27% Similarity=0.098 Sum_probs=13.1
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++|+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 579999999999863
No 140
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=74.87 E-value=1.5 Score=37.81 Aligned_cols=29 Identities=31% Similarity=0.255 Sum_probs=24.8
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchh
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEG 197 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~ 197 (224)
+..-|++.++|+.+.+.|.++|-|++...
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~ 140 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ 140 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch
Confidence 34458999999999988999999998764
No 141
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=74.82 E-value=5.3 Score=34.67 Aligned_cols=13 Identities=23% Similarity=0.347 Sum_probs=11.0
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
+++|+||||+...
T Consensus 1 ~lfD~DGvL~~~~ 13 (236)
T TIGR01460 1 FLFDIDGVLWLGH 13 (236)
T ss_pred CEEeCcCccCcCC
Confidence 4799999999863
No 142
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=74.79 E-value=1.9 Score=38.46 Aligned_cols=17 Identities=29% Similarity=0.265 Sum_probs=14.3
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
.-+.+++||||||+.|.
T Consensus 23 ~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDD 39 (260)
T ss_pred CceEEEEeCCCceeCCc
Confidence 45679999999999973
No 143
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=74.76 E-value=1.5 Score=34.98 Aligned_cols=13 Identities=38% Similarity=0.639 Sum_probs=11.6
Q ss_pred eEEEeCCCceecc
Q 027383 113 TVVLDLDETLVCA 125 (224)
Q Consensus 113 tLVLDLDETLVhs 125 (224)
.+++||||||+.+
T Consensus 1 ~vlFDlDgtLv~~ 13 (183)
T TIGR01509 1 AILFDLDGVLVDT 13 (183)
T ss_pred CeeeccCCceech
Confidence 3799999999987
No 144
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=74.17 E-value=2.1 Score=35.71 Aligned_cols=51 Identities=18% Similarity=0.057 Sum_probs=33.9
Q ss_pred EEEeccCHHHHHHHhhh-CceEEEEcCCchhh--HHHHHHhhCCCCccceeeec
Q 027383 168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGY--ARPLVDKIDRENLFSLRLYR 218 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~Y--A~~Vld~IDP~~~F~~RLyR 218 (224)
.+...|++.++|+++.+ .+.++|.|++...+ +...+..++-..+|+..+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s 145 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVES 145 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEe
Confidence 35678999999999986 59999999987665 32222222222356665543
No 145
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=74.15 E-value=1.7 Score=35.87 Aligned_cols=15 Identities=27% Similarity=0.222 Sum_probs=12.7
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++|+||||+.+.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 368999999999864
No 146
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=73.82 E-value=1.9 Score=37.18 Aligned_cols=16 Identities=44% Similarity=0.501 Sum_probs=13.6
Q ss_pred CCeeEEEeCCCceecc
Q 027383 110 EKLTVVLDLDETLVCA 125 (224)
Q Consensus 110 ~KltLVLDLDETLVhs 125 (224)
+-+.+++||||||+.+
T Consensus 9 ~~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 9 DVDTVLLDMDGTLLDL 24 (224)
T ss_pred cCCEEEEcCCCCccch
Confidence 3567999999999985
No 147
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=73.64 E-value=2 Score=35.88 Aligned_cols=18 Identities=44% Similarity=0.488 Sum_probs=15.0
Q ss_pred CCCeeEEEeCCCceeccc
Q 027383 109 IEKLTVVLDLDETLVCAY 126 (224)
Q Consensus 109 ~~KltLVLDLDETLVhs~ 126 (224)
..++.+++|+||||+++.
T Consensus 12 ~~~k~iiFD~DGTL~~~~ 29 (219)
T TIGR00338 12 RSKKLVVFDMDSTLINAE 29 (219)
T ss_pred ccCCEEEEeCcccCCCch
Confidence 356789999999999863
No 148
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=73.62 E-value=1.3 Score=36.76 Aligned_cols=13 Identities=54% Similarity=0.815 Sum_probs=11.4
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
+++||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999874
No 149
>PRK09449 dUMP phosphatase; Provisional
Probab=73.62 E-value=1.7 Score=36.53 Aligned_cols=13 Identities=38% Similarity=0.424 Sum_probs=11.8
Q ss_pred eeEEEeCCCceec
Q 027383 112 LTVVLDLDETLVC 124 (224)
Q Consensus 112 ltLVLDLDETLVh 124 (224)
+.+++||||||++
T Consensus 4 k~iiFDlDGTLid 16 (224)
T PRK09449 4 DWILFDADETLFH 16 (224)
T ss_pred cEEEEcCCCchhc
Confidence 5799999999996
No 150
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=73.62 E-value=2 Score=34.95 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=12.9
Q ss_pred CeeEEEeCCCceecc
Q 027383 111 KLTVVLDLDETLVCA 125 (224)
Q Consensus 111 KltLVLDLDETLVhs 125 (224)
.+.+|+|+||||+.+
T Consensus 4 ~k~viFD~DGTLid~ 18 (201)
T TIGR01491 4 IKLIIFDLDGTLTDV 18 (201)
T ss_pred ceEEEEeCCCCCcCC
Confidence 357999999999975
No 151
>PLN02940 riboflavin kinase
Probab=73.38 E-value=4.3 Score=38.17 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=43.7
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHH-hhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVD-KIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld-~IDP~~~F~~RLyRdsC 221 (224)
+...||+.++|+++.+. +.+.|-|++.+.+++.+++ ..+=.++|+..+..+++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v 146 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV 146 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc
Confidence 45689999999999755 8999999999999998887 45444578888887765
No 152
>PLN02423 phosphomannomutase
Probab=73.20 E-value=8.7 Score=33.72 Aligned_cols=17 Identities=24% Similarity=0.382 Sum_probs=13.3
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
.|..+++||||||+...
T Consensus 6 ~~~i~~~D~DGTLl~~~ 22 (245)
T PLN02423 6 PGVIALFDVDGTLTAPR 22 (245)
T ss_pred cceEEEEeccCCCcCCC
Confidence 45566799999999754
No 153
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=73.17 E-value=1.7 Score=34.98 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=36.4
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCccceeeec
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYR 218 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyR 218 (224)
+...||+.++|+++.+ .+.+.|-|++. .+..+++.+.-.++|+..+..
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~ 134 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDP 134 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEeh
Confidence 3568999999999974 58898988764 467788887666677776543
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=72.99 E-value=4.4 Score=36.91 Aligned_cols=54 Identities=19% Similarity=0.337 Sum_probs=43.9
Q ss_pred EEeccCHHHHHHHhhh--CceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCcC
Q 027383 169 VFERPGLHEFLKKLAE--FADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTV 222 (224)
Q Consensus 169 V~~RPgL~EFL~~lse--~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC~ 222 (224)
+-.-||+-+-++.+.+ .||++|-+.+..-+.+.+++..+-+.+|+..+..+.|+
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~ 138 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACV 138 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCccc
Confidence 4456999998888874 48999999999999999999887777777666666664
No 155
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=72.95 E-value=8.5 Score=33.65 Aligned_cols=16 Identities=25% Similarity=0.073 Sum_probs=13.5
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
-+.+++|+||||+.+.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3689999999999873
No 156
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=72.94 E-value=2 Score=37.83 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=29.1
Q ss_pred ccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCC
Q 027383 172 RPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDREN 210 (224)
Q Consensus 172 RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~ 210 (224)
=|+..+|++.+.+. ++|++=|.-.+..-+.-++.|...|
T Consensus 117 ip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G 156 (229)
T PF03767_consen 117 IPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAG 156 (229)
T ss_dssp ETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcC
Confidence 48899999999876 7777777777666666666665444
No 157
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=72.93 E-value=4.7 Score=33.79 Aligned_cols=48 Identities=10% Similarity=0.139 Sum_probs=39.1
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccc-eeeec
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFS-LRLYR 218 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~-~RLyR 218 (224)
+...||+.++|+.+. +.+.|.|++.+.+++.+++..+=..+|. ..+..
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~ 135 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSG 135 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeH
Confidence 567799999999994 8999999999999999998876666674 34443
No 158
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=72.91 E-value=3.7 Score=35.70 Aligned_cols=16 Identities=31% Similarity=0.304 Sum_probs=14.0
Q ss_pred CCeeEEEeCCCceecc
Q 027383 110 EKLTVVLDLDETLVCA 125 (224)
Q Consensus 110 ~KltLVLDLDETLVhs 125 (224)
+|..|+||+||||+-.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 6788999999999963
No 159
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=72.55 E-value=2.4 Score=35.80 Aligned_cols=17 Identities=24% Similarity=0.428 Sum_probs=14.4
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
.-+.+++|+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35789999999999874
No 160
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=72.29 E-value=2 Score=35.74 Aligned_cols=16 Identities=44% Similarity=0.418 Sum_probs=13.5
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
-..+++|+||||+++.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 4479999999999864
No 161
>PRK11587 putative phosphatase; Provisional
Probab=71.98 E-value=7.8 Score=32.69 Aligned_cols=16 Identities=38% Similarity=0.382 Sum_probs=13.7
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
.+.+++||||||+.+.
T Consensus 3 ~k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 3 CKGFLFDLDGTLVDSL 18 (218)
T ss_pred CCEEEEcCCCCcCcCH
Confidence 3579999999999874
No 162
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=71.71 E-value=2.4 Score=34.07 Aligned_cols=16 Identities=38% Similarity=0.439 Sum_probs=13.8
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
|..+|+|+||||+...
T Consensus 1 ~~~iiFD~dgTL~~~~ 16 (188)
T TIGR01489 1 KVVVVSDFDGTITLND 16 (188)
T ss_pred CeEEEEeCCCcccCCC
Confidence 5789999999999764
No 163
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=71.70 E-value=1.6 Score=36.11 Aligned_cols=13 Identities=54% Similarity=0.652 Sum_probs=11.2
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
+++|+||||+.+.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999864
No 164
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=71.68 E-value=13 Score=34.29 Aligned_cols=48 Identities=8% Similarity=0.143 Sum_probs=35.0
Q ss_pred ccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCCCc--cceeeecC
Q 027383 172 RPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRENL--FSLRLYRP 219 (224)
Q Consensus 172 RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~~~--F~~RLyRd 219 (224)
=|+..+|++++.+ -+.|++-|.-.+..-+.-++.|...|+ .++-+.|+
T Consensus 147 lp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 147 LPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKD 197 (275)
T ss_pred ChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecC
Confidence 3688899999974 588888888888777777777766664 34555563
No 165
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=71.28 E-value=2.3 Score=35.09 Aligned_cols=13 Identities=46% Similarity=0.485 Sum_probs=11.2
Q ss_pred eeEEEeCCCceec
Q 027383 112 LTVVLDLDETLVC 124 (224)
Q Consensus 112 ltLVLDLDETLVh 124 (224)
..+++|+||||+.
T Consensus 2 ~~v~FD~DGTL~~ 14 (205)
T PRK13582 2 EIVCLDLEGVLVP 14 (205)
T ss_pred eEEEEeCCCCChh
Confidence 3689999999994
No 166
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=71.23 E-value=2 Score=34.50 Aligned_cols=45 Identities=7% Similarity=0.017 Sum_probs=36.8
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhhCCCCccceeeecC
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRP 219 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRd 219 (224)
+..+||+.++|++ +.|.|++.+.+++.+++...-.++|+..+..+
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~ 133 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPWYFDRAFSVD 133 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHh
Confidence 5679999999994 78999999999999999886656677655544
No 167
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=70.85 E-value=6.3 Score=37.23 Aligned_cols=42 Identities=29% Similarity=0.314 Sum_probs=38.1
Q ss_pred eEEEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhh-C
Q 027383 166 YVTVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKI-D 207 (224)
Q Consensus 166 ~v~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~I-D 207 (224)
.-|+.+=|++.++|+++.+. ..+.|-|++...|++.+++.+ +
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 45788899999999999865 899999999999999999997 5
No 168
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=70.01 E-value=2.5 Score=37.98 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=34.9
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKID 207 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~ID 207 (224)
+...||+.++|+++.+ .+.+.|-|++.+.+++.+++.+.
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~ 182 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLL 182 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc
Confidence 4688999999999985 59999999999999999998763
No 169
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=68.21 E-value=6.6 Score=32.65 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=11.6
Q ss_pred eeEEEeCCCceecc
Q 027383 112 LTVVLDLDETLVCA 125 (224)
Q Consensus 112 ltLVLDLDETLVhs 125 (224)
+.+++||||||+.+
T Consensus 3 k~viFDldGtL~d~ 16 (211)
T TIGR02247 3 KAVIFDFGGVLLPS 16 (211)
T ss_pred eEEEEecCCceecC
Confidence 36899999999975
No 170
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=67.51 E-value=3.1 Score=34.85 Aligned_cols=16 Identities=38% Similarity=0.281 Sum_probs=13.6
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
-..+++|+||||+.+.
T Consensus 4 ~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCEEEECCCCCCCCCh
Confidence 4588999999999864
No 171
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=67.40 E-value=10 Score=33.99 Aligned_cols=16 Identities=25% Similarity=0.256 Sum_probs=14.0
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
-..+|+|+||||+.+.
T Consensus 40 ~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 40 PEALLFDCDGVLVETE 55 (286)
T ss_pred CcEEEEeCceeEEccc
Confidence 4689999999999875
No 172
>PLN02954 phosphoserine phosphatase
Probab=67.09 E-value=3.3 Score=34.69 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=13.6
Q ss_pred CCeeEEEeCCCceecc
Q 027383 110 EKLTVVLDLDETLVCA 125 (224)
Q Consensus 110 ~KltLVLDLDETLVhs 125 (224)
..+.+++|+||||+.+
T Consensus 11 ~~k~viFDfDGTL~~~ 26 (224)
T PLN02954 11 SADAVCFDVDSTVCVD 26 (224)
T ss_pred cCCEEEEeCCCcccch
Confidence 3578899999999975
No 173
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=66.71 E-value=12 Score=32.26 Aligned_cols=36 Identities=22% Similarity=0.136 Sum_probs=32.3
Q ss_pred EeccCHHHHHH-Hhh-hCceEEEEcCCchhhHHHHHHh
Q 027383 170 FERPGLHEFLK-KLA-EFADLVLFTAGLEGYARPLVDK 205 (224)
Q Consensus 170 ~~RPgL~EFL~-~ls-e~fEIvIFTAg~k~YA~~Vld~ 205 (224)
..+|+..|.|+ .+. +-..++|-|++...|++++++.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~ 131 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD 131 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh
Confidence 57999999995 777 5899999999999999999966
No 174
>PLN03017 trehalose-phosphatase
Probab=66.13 E-value=11 Score=35.97 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.7
Q ss_pred CCCCCeeEEEeCCCcee
Q 027383 107 QEIEKLTVVLDLDETLV 123 (224)
Q Consensus 107 ~~~~KltLVLDLDETLV 123 (224)
...++..|+||+||||+
T Consensus 107 ~~~k~~llflD~DGTL~ 123 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLS 123 (366)
T ss_pred hcCCCeEEEEecCCcCc
Confidence 34578999999999999
No 175
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=66.00 E-value=7.6 Score=31.21 Aligned_cols=46 Identities=17% Similarity=0.406 Sum_probs=36.8
Q ss_pred eccCHH----HHHHHh-hhCceEEEEcCCchhhHHHHHHhhCCC--Cccceee
Q 027383 171 ERPGLH----EFLKKL-AEFADLVLFTAGLEGYARPLVDKIDRE--NLFSLRL 216 (224)
Q Consensus 171 ~RPgL~----EFL~~l-se~fEIvIFTAg~k~YA~~Vld~IDP~--~~F~~RL 216 (224)
.+|++. +|++++ .+.++++|-|++...+++++++.+.-. +++..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 346666 999998 578999999999999999999977544 3556665
No 176
>PRK11590 hypothetical protein; Provisional
Probab=65.92 E-value=13 Score=31.50 Aligned_cols=16 Identities=44% Similarity=0.503 Sum_probs=13.9
Q ss_pred CCeeEEEeCCCceecc
Q 027383 110 EKLTVVLDLDETLVCA 125 (224)
Q Consensus 110 ~KltLVLDLDETLVhs 125 (224)
+++.+++|+||||++.
T Consensus 5 ~~k~~iFD~DGTL~~~ 20 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQ 20 (211)
T ss_pred cceEEEEecCCCCccc
Confidence 5779999999999954
No 177
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=65.47 E-value=13 Score=34.80 Aligned_cols=14 Identities=29% Similarity=0.261 Sum_probs=12.1
Q ss_pred eeEEEeCCCceecc
Q 027383 112 LTVVLDLDETLVCA 125 (224)
Q Consensus 112 ltLVLDLDETLVhs 125 (224)
+.+++||||||+..
T Consensus 2 KLIftDLDGTLLd~ 15 (302)
T PRK12702 2 RLVLSSLDGSLLDL 15 (302)
T ss_pred cEEEEeCCCCCcCC
Confidence 57899999999964
No 178
>PLN02887 hydrolase family protein
Probab=63.43 E-value=15 Score=37.01 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=14.3
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
+.+.+++||||||+...
T Consensus 307 ~iKLIa~DLDGTLLn~d 323 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSK 323 (580)
T ss_pred CccEEEEeCCCCCCCCC
Confidence 56789999999999753
No 179
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=63.20 E-value=14 Score=33.68 Aligned_cols=62 Identities=21% Similarity=0.175 Sum_probs=45.6
Q ss_pred CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383 106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF 185 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~ 185 (224)
....+|..++||.||||.+-... |. + +.-=+.+.+-|+.|...
T Consensus 13 ~~~a~~~~~~lDyDGTl~~i~~~---p~--------~--------------------------a~~~~~l~~lL~~Las~ 55 (266)
T COG1877 13 YLNARKRLLFLDYDGTLTEIVPH---PE--------A--------------------------AVPDDRLLSLLQDLASD 55 (266)
T ss_pred cccccceEEEEeccccccccccC---cc--------c--------------------------cCCCHHHHHHHHHHHhc
Confidence 45568999999999999975311 10 0 11235678889999998
Q ss_pred ce--EEEEcCCchhhHHHHHH
Q 027383 186 AD--LVLFTAGLEGYARPLVD 204 (224)
Q Consensus 186 fE--IvIFTAg~k~YA~~Vld 204 (224)
+. ++|.|.-+..-.+..++
T Consensus 56 ~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 56 PRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred CCCeEEEEeCCCHHHHHHhcC
Confidence 88 88888888888888877
No 180
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=63.16 E-value=23 Score=30.16 Aligned_cols=18 Identities=39% Similarity=0.429 Sum_probs=15.0
Q ss_pred CCeeEEEeCCCceecccc
Q 027383 110 EKLTVVLDLDETLVCAYE 127 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~e 127 (224)
..+++++|+||||+.+..
T Consensus 3 ~~~~iiFDlDGTL~Ds~~ 20 (220)
T COG0546 3 MIKAILFDLDGTLVDSAE 20 (220)
T ss_pred CCCEEEEeCCCccccChH
Confidence 457899999999998753
No 181
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=63.16 E-value=14 Score=29.63 Aligned_cols=13 Identities=31% Similarity=0.491 Sum_probs=11.0
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
+++|+||||+.+.
T Consensus 2 iiFD~DGTL~ds~ 14 (185)
T TIGR01990 2 VIFDLDGVITDTA 14 (185)
T ss_pred eEEcCCCccccCh
Confidence 6899999999874
No 182
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=61.76 E-value=14 Score=32.32 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=34.1
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKID 207 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~ID 207 (224)
....|++.++|+++.+ -+.++|+|+++..+.+.+++..+
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~ 133 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSD 133 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhcc
Confidence 5578999999999975 68999999999999999887753
No 183
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=61.22 E-value=3.8 Score=39.14 Aligned_cols=15 Identities=27% Similarity=0.430 Sum_probs=13.3
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
..+++||||||+.+.
T Consensus 242 k~vIFDlDGTLiDs~ 256 (459)
T PRK06698 242 QALIFDMDGTLFQTD 256 (459)
T ss_pred hheeEccCCceecch
Confidence 579999999999874
No 184
>PLN02382 probable sucrose-phosphatase
Probab=61.02 E-value=5.5 Score=38.05 Aligned_cols=17 Identities=41% Similarity=0.524 Sum_probs=14.7
Q ss_pred CCCeeEEEeCCCceecc
Q 027383 109 IEKLTVVLDLDETLVCA 125 (224)
Q Consensus 109 ~~KltLVLDLDETLVhs 125 (224)
..++.|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 46999999999999954
No 185
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=60.36 E-value=5.2 Score=33.20 Aligned_cols=16 Identities=31% Similarity=0.349 Sum_probs=13.6
Q ss_pred CCeeEEEeCCCceecc
Q 027383 110 EKLTVVLDLDETLVCA 125 (224)
Q Consensus 110 ~KltLVLDLDETLVhs 125 (224)
..+.+++|+||||++.
T Consensus 3 ~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 3 MIKAILFDLDGTLLDF 18 (229)
T ss_pred ceeEEEEecCCccccc
Confidence 3568899999999986
No 186
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=60.06 E-value=4.9 Score=34.69 Aligned_cols=53 Identities=15% Similarity=0.230 Sum_probs=46.5
Q ss_pred EEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCCCccceeeecCCc
Q 027383 169 VFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPST 221 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRdsC 221 (224)
+...||+.+||+++.+. .-+.+=|++.+.-++.+++.+.-.++|..++++++.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv 138 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDV 138 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHH
Confidence 67899999999999977 999999999999999999998877788887776654
No 187
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=59.83 E-value=22 Score=35.14 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=36.1
Q ss_pred EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCC
Q 027383 168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDR 208 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP 208 (224)
.-..||+..+.++++.+ -++++|-|...+.+|+.+++.+.-
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 34579999999999986 499999999999999999998743
No 188
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=59.19 E-value=5.3 Score=35.16 Aligned_cols=14 Identities=36% Similarity=0.415 Sum_probs=12.3
Q ss_pred CCeeEEEeCCCcee
Q 027383 110 EKLTVVLDLDETLV 123 (224)
Q Consensus 110 ~KltLVLDLDETLV 123 (224)
+++.|+-|||+||+
T Consensus 1 ~~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 1 PPRLLASDLDGTLI 14 (247)
T ss_dssp -SEEEEEETBTTTB
T ss_pred CCEEEEEECCCCCc
Confidence 37889999999999
No 189
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=58.81 E-value=5.4 Score=33.82 Aligned_cols=16 Identities=19% Similarity=0.326 Sum_probs=13.9
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
|.++++|+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 5689999999999764
No 190
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=58.31 E-value=4.2 Score=32.64 Aligned_cols=13 Identities=38% Similarity=0.373 Sum_probs=11.3
Q ss_pred EEEeCCCceeccc
Q 027383 114 VVLDLDETLVCAY 126 (224)
Q Consensus 114 LVLDLDETLVhs~ 126 (224)
|++|+||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 6899999999764
No 191
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=57.65 E-value=11 Score=32.61 Aligned_cols=15 Identities=40% Similarity=0.523 Sum_probs=12.8
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+-+++|||||||.|.
T Consensus 3 ~avIFD~DGvLvDse 17 (221)
T COG0637 3 KAVIFDMDGTLVDSE 17 (221)
T ss_pred cEEEEcCCCCcCcch
Confidence 468999999999873
No 192
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=57.34 E-value=25 Score=28.44 Aligned_cols=44 Identities=23% Similarity=0.243 Sum_probs=38.6
Q ss_pred eEEEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhhCCC
Q 027383 166 YVTVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKIDRE 209 (224)
Q Consensus 166 ~v~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~IDP~ 209 (224)
...-..||++.++|+++.+. ..++|.|...+..|..+.+.+.-.
T Consensus 123 ~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~ 167 (215)
T PF00702_consen 123 GLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF 167 (215)
T ss_dssp EEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC
T ss_pred eecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc
Confidence 34456799999999999987 899999999999999999998764
No 193
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=57.09 E-value=5.9 Score=34.42 Aligned_cols=15 Identities=47% Similarity=0.527 Sum_probs=13.5
Q ss_pred CCeeEEEeCCCceec
Q 027383 110 EKLTVVLDLDETLVC 124 (224)
Q Consensus 110 ~KltLVLDLDETLVh 124 (224)
.+..+|+|||+||+.
T Consensus 4 ~~~L~vFD~D~TLi~ 18 (212)
T COG0560 4 MKKLAVFDLDGTLIN 18 (212)
T ss_pred ccceEEEecccchhh
Confidence 577889999999998
No 194
>PLN02151 trehalose-phosphatase
Probab=57.01 E-value=20 Score=34.07 Aligned_cols=18 Identities=33% Similarity=0.399 Sum_probs=14.9
Q ss_pred CCCCCeeEEEeCCCceec
Q 027383 107 QEIEKLTVVLDLDETLVC 124 (224)
Q Consensus 107 ~~~~KltLVLDLDETLVh 124 (224)
...++..|+||+||||+-
T Consensus 94 ~~~~~~ll~lDyDGTL~P 111 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSP 111 (354)
T ss_pred hcCCceEEEEecCccCCC
Confidence 344789999999999993
No 195
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=56.17 E-value=7.8 Score=35.44 Aligned_cols=27 Identities=22% Similarity=0.176 Sum_probs=19.9
Q ss_pred HHHHHHHhhhCceEEEEcCCchhhHHH
Q 027383 175 LHEFLKKLAEFADLVLFTAGLEGYARP 201 (224)
Q Consensus 175 L~EFL~~lse~fEIvIFTAg~k~YA~~ 201 (224)
++|-|+++.++|-..-|..+.+.-+..
T Consensus 106 ire~l~kLee~~g~~~~~~~d~~ei~e 132 (274)
T COG3769 106 IREKLDKLEEHFGFTTFDDVDDEEIAE 132 (274)
T ss_pred HHHHHHHHHHHhCeeEeccCCHHHHHH
Confidence 566778888888888888877655443
No 196
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=55.94 E-value=25 Score=31.42 Aligned_cols=52 Identities=21% Similarity=0.348 Sum_probs=41.9
Q ss_pred EEeccCHHHHHHHhh---hCceEEEEcCCchhhHHHHHHhhCCCCccceeeecCC
Q 027383 169 VFERPGLHEFLKKLA---EFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPS 220 (224)
Q Consensus 169 V~~RPgL~EFL~~ls---e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~~RLyRds 220 (224)
+..-||..+|++.+. ..+|++|=+.|..-|-+.+++.-.-.+.|+..+....
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa 124 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPA 124 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCc
Confidence 667899999999994 3899999999999999999987665555555444433
No 197
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=55.92 E-value=6 Score=33.99 Aligned_cols=11 Identities=45% Similarity=0.576 Sum_probs=10.2
Q ss_pred EEEeCCCceec
Q 027383 114 VVLDLDETLVC 124 (224)
Q Consensus 114 LVLDLDETLVh 124 (224)
.++|||+|||.
T Consensus 4 a~FDlD~TLi~ 14 (203)
T TIGR02137 4 ACLDLEGVLVP 14 (203)
T ss_pred EEEeCCcccHH
Confidence 79999999995
No 198
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=55.86 E-value=11 Score=37.16 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=18.5
Q ss_pred hCceEEEEcCCchhhHHHHHHh
Q 027383 184 EFADLVLFTAGLEGYARPLVDK 205 (224)
Q Consensus 184 e~fEIvIFTAg~k~YA~~Vld~ 205 (224)
++-+.+|-||+.+.|++++++.
T Consensus 121 ~~g~~vvVSASp~~~Vepfa~~ 142 (497)
T PLN02177 121 SFGKRYIITASPRIMVEPFVKT 142 (497)
T ss_pred hCCCEEEEECCcHHHHHHHHHH
Confidence 3445699999999999999965
No 199
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=55.76 E-value=6.4 Score=37.68 Aligned_cols=17 Identities=6% Similarity=0.177 Sum_probs=14.6
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
+-+.+++|+|||||.+.
T Consensus 130 ~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDN 146 (381)
T ss_pred CCCEEEEcCcCcceeCH
Confidence 56789999999999864
No 200
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=55.44 E-value=7 Score=32.50 Aligned_cols=54 Identities=13% Similarity=0.033 Sum_probs=37.8
Q ss_pred EEEeccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhh-CCCCccceeeecCCc
Q 027383 168 TVFERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKI-DRENLFSLRLYRPST 221 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~I-DP~~~F~~RLyRdsC 221 (224)
+...+||+.++|+.+.+ -+.++|-|++.+..++.+++.. .-..+|+..+.-+++
T Consensus 82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~ 137 (199)
T PRK09456 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDL 137 (199)
T ss_pred HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEeccc
Confidence 35678999999999975 5999999999988766554332 112356665554443
No 201
>PLN02811 hydrolase
Probab=54.96 E-value=15 Score=31.05 Aligned_cols=51 Identities=10% Similarity=-0.026 Sum_probs=36.5
Q ss_pred EEeccCHHHHHHHhhh-CceEEEEcCCchhhHHH-HHHhhCCCCccceeeecC
Q 027383 169 VFERPGLHEFLKKLAE-FADLVLFTAGLEGYARP-LVDKIDRENLFSLRLYRP 219 (224)
Q Consensus 169 V~~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~-Vld~IDP~~~F~~RLyRd 219 (224)
+...||+.++|+.+.+ .+.+.|-|++.+.+... ..+...-..+|+..++.+
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~ 129 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGD 129 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECC
Confidence 4567999999999985 59999999998876553 332222224677777766
No 202
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=53.99 E-value=6.3 Score=33.68 Aligned_cols=12 Identities=42% Similarity=0.700 Sum_probs=10.7
Q ss_pred EEEeCCCceecc
Q 027383 114 VVLDLDETLVCA 125 (224)
Q Consensus 114 LVLDLDETLVhs 125 (224)
++.||||||++.
T Consensus 2 i~~DlDgTLl~~ 13 (236)
T TIGR02471 2 IITDLDNTLLGD 13 (236)
T ss_pred eEEeccccccCC
Confidence 789999999974
No 203
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=53.84 E-value=18 Score=29.98 Aligned_cols=13 Identities=23% Similarity=0.376 Sum_probs=10.7
Q ss_pred eEEEeCCCceecc
Q 027383 113 TVVLDLDETLVCA 125 (224)
Q Consensus 113 tLVLDLDETLVhs 125 (224)
++|+||||||++.
T Consensus 2 ~viFDldgvL~d~ 14 (199)
T PRK09456 2 LYIFDLGNVIVDI 14 (199)
T ss_pred EEEEeCCCccccC
Confidence 5789999999975
No 204
>PHA02597 30.2 hypothetical protein; Provisional
Probab=53.63 E-value=14 Score=30.49 Aligned_cols=16 Identities=31% Similarity=0.376 Sum_probs=13.4
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
.+.+++||||||++..
T Consensus 2 ~k~viFDlDGTLiD~~ 17 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ 17 (197)
T ss_pred CcEEEEecCCceEchh
Confidence 3579999999999854
No 205
>PLN02940 riboflavin kinase
Probab=53.16 E-value=9.7 Score=35.84 Aligned_cols=16 Identities=44% Similarity=0.486 Sum_probs=13.3
Q ss_pred CeeEEEeCCCceeccc
Q 027383 111 KLTVVLDLDETLVCAY 126 (224)
Q Consensus 111 KltLVLDLDETLVhs~ 126 (224)
=+.+++|+||||+.+.
T Consensus 11 ik~VIFDlDGTLvDt~ 26 (382)
T PLN02940 11 VSHVILDLDGTLLNTD 26 (382)
T ss_pred CCEEEECCcCcCCcCH
Confidence 4458999999999874
No 206
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=52.62 E-value=8.1 Score=33.24 Aligned_cols=17 Identities=35% Similarity=0.341 Sum_probs=14.2
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
-|+..++|+||||++..
T Consensus 4 ~~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQD 20 (210)
T ss_pred cCcEEEEcCCCCCccCc
Confidence 36678999999999974
No 207
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=50.77 E-value=27 Score=35.51 Aligned_cols=18 Identities=33% Similarity=0.359 Sum_probs=14.8
Q ss_pred CCCCeeEEEeCCCceecc
Q 027383 108 EIEKLTVVLDLDETLVCA 125 (224)
Q Consensus 108 ~~~KltLVLDLDETLVhs 125 (224)
..++..+++|+||||+..
T Consensus 489 ~~~~rLi~~D~DGTL~~~ 506 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPF 506 (726)
T ss_pred hccceEEEEecCccccCC
Confidence 346789999999999953
No 208
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=49.17 E-value=24 Score=34.70 Aligned_cols=48 Identities=17% Similarity=0.213 Sum_probs=40.9
Q ss_pred eEEEEeccCHHHHHHHhhhC--ceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383 166 YVTVFERPGLHEFLKKLAEF--ADLVLFTAGLEGYARPLVDKIDRENLFS 213 (224)
Q Consensus 166 ~v~V~~RPgL~EFL~~lse~--fEIvIFTAg~k~YA~~Vld~IDP~~~F~ 213 (224)
.+....||+..+.++++.+. +.++|-|...+.+|+.+++.+.-+.+|.
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~ 429 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHA 429 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeec
Confidence 34456899999999999764 8999999999999999999987765554
No 209
>PLN02580 trehalose-phosphatase
Probab=49.02 E-value=34 Score=32.90 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=44.1
Q ss_pred CCCCCCeeEEEeCCCceeccccCCCchHHhhhhHhhhccceeeeeccccCcccCCCcceeeEEEEeccCHHHHHHHhhhC
Q 027383 106 GQEIEKLTVVLDLDETLVCAYETSSLPAIIRTQAAEAGLKLFELECVSSDKECDGKPKINYVTVFERPGLHEFLKKLAEF 185 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs~e~Ss~p~~~r~q~~eagl~~F~i~~~~~~~~~~G~~~~~~v~V~~RPgL~EFL~~lse~ 185 (224)
....++..|.||.||||.--..+ |. -+..=|.+.+-|+.+++.
T Consensus 114 ~~~~k~~~LfLDyDGTLaPIv~~---Pd----------------------------------~A~~s~~~~~aL~~La~~ 156 (384)
T PLN02580 114 FAKGKKIALFLDYDGTLSPIVDD---PD----------------------------------RALMSDAMRSAVKNVAKY 156 (384)
T ss_pred HhhcCCeEEEEecCCccCCCCCC---cc----------------------------------cccCCHHHHHHHHHHhhC
Confidence 44568899999999999842211 10 023346778888888888
Q ss_pred ceEEEEcCCchhhHHHHHHh
Q 027383 186 ADLVLFTAGLEGYARPLVDK 205 (224)
Q Consensus 186 fEIvIFTAg~k~YA~~Vld~ 205 (224)
+-++|-|--...-.+..+..
T Consensus 157 ~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 157 FPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCEEEEeCCCHHHHHHHhCC
Confidence 88888888777777776654
No 210
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=48.55 E-value=32 Score=36.96 Aligned_cols=52 Identities=8% Similarity=0.018 Sum_probs=43.8
Q ss_pred eccCHHHHHHHhhh-CceEEEEcCCchhhHHHHHHhhCCC-CccceeeecCCcC
Q 027383 171 ERPGLHEFLKKLAE-FADLVLFTAGLEGYARPLVDKIDRE-NLFSLRLYRPSTV 222 (224)
Q Consensus 171 ~RPgL~EFL~~lse-~fEIvIFTAg~k~YA~~Vld~IDP~-~~F~~RLyRdsC~ 222 (224)
.-||+.++|+++.+ -+.+.|-|++...+++.+++.+.-. .+|+..+..+++.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~ 215 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFE 215 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccc
Confidence 47999999999975 5999999999999999999988754 4688877766653
No 211
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=47.40 E-value=81 Score=26.48 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=24.2
Q ss_pred hCceEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383 184 EFADLVLFTAGLEGYARPLVDKIDRENLFS 213 (224)
Q Consensus 184 e~fEIvIFTAg~k~YA~~Vld~IDP~~~F~ 213 (224)
+.+.+.|-|+....+++.+++.+.-..+|.
T Consensus 49 ~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~ 78 (169)
T TIGR02726 49 CGIDVAIITSKKSGAVRHRAEELKIKRFHE 78 (169)
T ss_pred CCCEEEEEECCCcHHHHHHHHHCCCcEEEe
Confidence 468999999999999999999886555443
No 212
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=42.73 E-value=21 Score=30.70 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=25.2
Q ss_pred EEeccCHHHHHHHhhhCceEEEEcCCchhh
Q 027383 169 VFERPGLHEFLKKLAEFADLVLFTAGLEGY 198 (224)
Q Consensus 169 V~~RPgL~EFL~~lse~fEIvIFTAg~k~Y 198 (224)
...-||.++-++++.++|+++|-||+...|
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp 96 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHP 96 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCc
Confidence 345689999999999999999999995444
No 213
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=40.88 E-value=15 Score=32.85 Aligned_cols=14 Identities=43% Similarity=0.783 Sum_probs=0.0
Q ss_pred CCeeEEEeCCCcee
Q 027383 110 EKLTVVLDLDETLV 123 (224)
Q Consensus 110 ~KltLVLDLDETLV 123 (224)
.+..||+|+|+||+
T Consensus 19 ~~tLvvfDiDdTLi 32 (252)
T PF11019_consen 19 QDTLVVFDIDDTLI 32 (252)
T ss_pred CCeEEEEEcchhhh
No 214
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=39.89 E-value=23 Score=35.34 Aligned_cols=25 Identities=8% Similarity=0.049 Sum_probs=20.6
Q ss_pred CceEEEEcCCchhhHHHHHHh-hCCC
Q 027383 185 FADLVLFTAGLEGYARPLVDK-IDRE 209 (224)
Q Consensus 185 ~fEIvIFTAg~k~YA~~Vld~-IDP~ 209 (224)
.-.++|-|++.+.|+++-++. +.-+
T Consensus 108 ~g~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 108 CDKRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred CCeEEEEeCCHHHHHHHHHHHhcCCc
Confidence 349999999999999999997 5443
No 215
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=38.21 E-value=17 Score=30.25 Aligned_cols=13 Identities=31% Similarity=0.708 Sum_probs=0.0
Q ss_pred CCeeEEEeCCCce
Q 027383 110 EKLTVVLDLDETL 122 (224)
Q Consensus 110 ~KltLVLDLDETL 122 (224)
+|+.|.+|+||||
T Consensus 1 ~~i~I~iDiDgVL 13 (191)
T PF06941_consen 1 RKIRIAIDIDGVL 13 (191)
T ss_dssp --EEEEEESBTTT
T ss_pred CCcEEEEECCCCC
No 216
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=38.08 E-value=78 Score=26.82 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=26.8
Q ss_pred EeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhh
Q 027383 170 FERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKI 206 (224)
Q Consensus 170 ~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~I 206 (224)
+.|||+-++..++.++ |.++=-|+-.-.-|+..-+.|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 5689999999999866 666666666656666655555
No 217
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=36.52 E-value=42 Score=32.90 Aligned_cols=47 Identities=15% Similarity=0.277 Sum_probs=39.8
Q ss_pred EEEEeccCHHHHHHHhhhC-c-eEEEEcCCchhhHHHHHHhhCCCCccc
Q 027383 167 VTVFERPGLHEFLKKLAEF-A-DLVLFTAGLEGYARPLVDKIDRENLFS 213 (224)
Q Consensus 167 v~V~~RPgL~EFL~~lse~-f-EIvIFTAg~k~YA~~Vld~IDP~~~F~ 213 (224)
..-..||+..|.++++.+. + +++|-|+..+.+|+.+++.+.-+++|.
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~ 407 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHA 407 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhh
Confidence 3456799999999999864 7 999999999999999999987655543
No 218
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=34.13 E-value=47 Score=28.57 Aligned_cols=15 Identities=33% Similarity=0.412 Sum_probs=13.1
Q ss_pred eeEEEeCCCceeccc
Q 027383 112 LTVVLDLDETLVCAY 126 (224)
Q Consensus 112 ltLVLDLDETLVhs~ 126 (224)
+.+++||||||+.+.
T Consensus 11 k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 11 SALTFDLDDTLYDNR 25 (238)
T ss_pred eeEEEcCcccccCCh
Confidence 579999999999863
No 219
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=33.08 E-value=37 Score=36.47 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=14.3
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
+-+.+++||||||+++.
T Consensus 74 ~ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCCEEEECCCCCeEeCh
Confidence 45579999999999974
No 220
>PRK12654 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=29.53 E-value=42 Score=28.40 Aligned_cols=19 Identities=11% Similarity=-0.048 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 027383 24 VSWVGFIFQVFIQILRGTP 42 (224)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~ 42 (224)
+..++|++=++.||++++=
T Consensus 2 l~~l~y~~~~l~eiv~Sni 20 (151)
T PRK12654 2 LHALKYAPWLIGQIFVAGF 20 (151)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 4567788888888888875
No 221
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=28.74 E-value=92 Score=30.67 Aligned_cols=12 Identities=42% Similarity=0.714 Sum_probs=10.5
Q ss_pred eeEEEeCCCcee
Q 027383 112 LTVVLDLDETLV 123 (224)
Q Consensus 112 ltLVLDLDETLV 123 (224)
...|-|||||||
T Consensus 198 RVFiWDlDEtiI 209 (468)
T KOG3107|consen 198 RVFIWDLDETII 209 (468)
T ss_pred eEEEeeccchHH
Confidence 358999999999
No 222
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=28.67 E-value=60 Score=29.51 Aligned_cols=39 Identities=31% Similarity=0.585 Sum_probs=30.7
Q ss_pred EEEeccCHHHHHHHhhhC-ceEEEEcCCchhhHHHHHHhh
Q 027383 168 TVFERPGLHEFLKKLAEF-ADLVLFTAGLEGYARPLVDKI 206 (224)
Q Consensus 168 ~V~~RPgL~EFL~~lse~-fEIvIFTAg~k~YA~~Vld~I 206 (224)
.+.+|.|..+|++.+.++ -=+.||+||.-.-.+.+++.-
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~ 127 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA 127 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc
Confidence 488999999999999976 578899999999999999886
No 223
>PF01899 MNHE: Na+/H+ ion antiporter subunit; InterPro: IPR002758 This family contains both characterised and uncharacterised bacterial and archaeal proteins; some of which are possibly transmembrane proteins involved in Na+/H+ or K+/H+ transport. The characterised proteins are mnhE (Staphylococcus aureus) and phaE. (Rhizobium meliloti), which are subunits of the Na+/H+ or K+/H+ antiporters, that are required for sodium and potassium excretion, respectively [, ].; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0016021 integral to membrane
Probab=27.55 E-value=47 Score=27.15 Aligned_cols=24 Identities=13% Similarity=0.160 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC
Q 027383 19 VWRGFVSWVGFIFQVFIQILRGTP 42 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~ 42 (224)
..+....++.|+.-++.||++++=
T Consensus 49 ~~~~~~~~~~~~~~~~~~i~~a~~ 72 (156)
T PF01899_consen 49 YFRRPWALLRYIGWFLWEIVKANL 72 (156)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888888888888775
No 224
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=27.18 E-value=1.2e+02 Score=23.21 Aligned_cols=17 Identities=41% Similarity=0.333 Sum_probs=14.5
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
...+|||+=|||.|.+.
T Consensus 38 ~~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 38 GVLTLVLEEDGTAVDSE 54 (81)
T ss_pred CceEEEEecCCCEEccH
Confidence 35899999999999764
No 225
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=26.63 E-value=1.6e+02 Score=22.49 Aligned_cols=17 Identities=35% Similarity=0.331 Sum_probs=14.5
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
...+|||+=|||.|.+.
T Consensus 39 ~~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 39 GLVTLVLEEDGTVVDTE 55 (78)
T ss_pred CCcEEEEeCCCCEEccH
Confidence 46899999999999763
No 226
>cd02974 AhpF_NTD_N Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) family, N-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which in turn catalyzes the reduction of hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD forming two contiguous TRX-fold subdomain similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The N-terminal TRX-fold subdomain of AhpF NTD is redox inactive, but is proposed to contain an important residue that aids in the catalytic function of the redox-active CXXC motif contained in the C-terminal TRX-
Probab=25.27 E-value=70 Score=24.52 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=21.2
Q ss_pred ccCHHHHHHHhhhCceEEEEcCCchhhHHHHHHhh
Q 027383 172 RPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKI 206 (224)
Q Consensus 172 RPgL~EFL~~lse~fEIvIFTAg~k~YA~~Vld~I 206 (224)
|-.|++.++.|.+-.++++|+.+. +|++.+.+.+
T Consensus 7 ~~qL~~~f~~l~~pV~l~~f~~~~-~~~~e~~~ll 40 (94)
T cd02974 7 KQQLKAYLERLENPVELVASLDDS-EKSAELLELL 40 (94)
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCC-cchHHHHHHH
Confidence 344566666666677777777655 6666555544
No 227
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=24.81 E-value=38 Score=35.69 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=14.3
Q ss_pred CCCeeEEEeCCCceecc
Q 027383 109 IEKLTVVLDLDETLVCA 125 (224)
Q Consensus 109 ~~KltLVLDLDETLVhs 125 (224)
.++..|+||+||||+..
T Consensus 594 ~~~rlI~LDyDGTLlp~ 610 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQ 610 (854)
T ss_pred hcCeEEEEecCCcccCC
Confidence 36788999999999954
No 228
>PF07615 Ykof: YKOF-related Family; InterPro: IPR011522 This entry represents YkoF-related proteins. YkoF is involved in the hydroxymethyl pyrimidine (HMP) salvage pathway []. The domain is found in pairs in these proteins.; PDB: 1S7H_A 1S99_A 1SBR_B.
Probab=24.37 E-value=59 Score=24.32 Aligned_cols=24 Identities=29% Similarity=0.567 Sum_probs=20.7
Q ss_pred ceEEEEcCCchhhHHHHHHhhCCC
Q 027383 186 ADLVLFTAGLEGYARPLVDKIDRE 209 (224)
Q Consensus 186 fEIvIFTAg~k~YA~~Vld~IDP~ 209 (224)
.++.+|-.|+..|.+.|.+.||.-
T Consensus 4 a~~SLYPmg~~dy~~~I~~~i~~~ 27 (81)
T PF07615_consen 4 AQFSLYPMGTDDYMDVILGAIDRL 27 (81)
T ss_dssp EEEEEEETTSTTHHHHHHHHHHHC
T ss_pred EEEEecccCCccHHHHHHHHHHHH
Confidence 478899999999999999988643
No 229
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=24.06 E-value=1.3e+02 Score=29.64 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=16.7
Q ss_pred CCCCCCeeEEEeCCCceeccc
Q 027383 106 GQEIEKLTVVLDLDETLVCAY 126 (224)
Q Consensus 106 ~~~~~KltLVLDLDETLVhs~ 126 (224)
......+.+-+|+|+|||.+.
T Consensus 70 ~v~~~~K~i~FD~dgtlI~t~ 90 (422)
T KOG2134|consen 70 KVNGGSKIIMFDYDGTLIDTK 90 (422)
T ss_pred ccCCCcceEEEecCCceeecC
Confidence 445567778999999999874
No 230
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=22.66 E-value=84 Score=31.70 Aligned_cols=17 Identities=12% Similarity=0.348 Sum_probs=14.3
Q ss_pred CCeeEEEeCCCceeccc
Q 027383 110 EKLTVVLDLDETLVCAY 126 (224)
Q Consensus 110 ~KltLVLDLDETLVhs~ 126 (224)
..-|+|.|+||||+.+.
T Consensus 49 ~~~t~v~d~~g~Ll~s~ 65 (525)
T PLN02588 49 SNHTLIFNVEGALLKSN 65 (525)
T ss_pred ccceEEEecccceeccC
Confidence 45689999999999864
No 231
>PRK12651 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=21.90 E-value=69 Score=26.63 Aligned_cols=18 Identities=0% Similarity=0.172 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 027383 25 SWVGFIFQVFIQILRGTP 42 (224)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~ 42 (224)
..++|+..++.|+++++=
T Consensus 56 ~~l~~~~~~~~~iv~a~~ 73 (158)
T PRK12651 56 KLIKLVPIFLKELIKANI 73 (158)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345566666677776654
Done!